LOCUS       DASQYP010000001         2303 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_211775, whole genome shotgun sequence.
ACCESSION   DASQYP010000001 DASQYP010000000
VERSION     DASQYP010000001.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 2303)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2303)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2303
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_211775"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(170..655)
                     /locus_tag="VE783_00005"
     CDS             complement(170..655)
                     /locus_tag="VE783_00005"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012745.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HYX51803.1"
                     /translation="MAKTKFSVLIHTCNHALQLGRALDSLRPSDDVVVIDHGSTDDTV
                     KVARDHGARVVNGVSGVDHGAYVQDARNDWILCLSPHEALAEELEASLFEWRDVEHQD
                     GQMGFNIAVREQNGHGWKFVGPHMRLANRKQVNWTGDFPPENPSAPALQGHILRIKEA
                     H"
     gene            complement(809..1921)
                     /locus_tag="VE783_00010"
     CDS             complement(809..1921)
                     /locus_tag="VE783_00010"
                     /inference="COORDINATES: protein motif:HMM:NF016836.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BON domain-containing protein"
                     /protein_id="HYX51804.1"
                     /translation="MRRYLLGFVLGSLALLGAGCSRNTSRPDAQIAQDVQSKINTDSA
                     VPDKQVTINSTSGVVTLSGNVSSDAARNAAANDAAQIEGVKTVVNNLQVAPTSAGNEP
                     MQNPADQQAQQQQNNAPPAREERSRPSPKRSHSASSRNSDNGDNGLRTTVPPSSTASA
                     PPPGMNGNSSNGGSSSYDNTANNTPPPPPVPQPITIPSGTQLSIRLNDTLDSEKSQVG
                     DTFHGSISSPVVVEGKTVIPTTADVEGRVVDVKSAGRFAGQSDLVIELTRIMMNGKSY
                     SIQTDRWSKQGNGRGKATAAKVGGGAAVGAILGGIFGGGKGAAIGAAAGAGAGTGVSA
                     ATKGQQILLKPETMLSFQLQNSISVTPGANRQAMNQ"
BASE COUNT          407 a          737 c          626 g          533 t
ORIGIN      
        1 cagcccgaac agaaaataga ttgcagcaat cagaagattg ggctgctgcg taatgaactg
       61 tgtctccagg gttgagctcc ggctgtgttc cgagtgttgc cacagattat acggagctgc
      121 cgcaggattt cacggttcca ctggttactg cacttgtgcg cgcacgctgc tagtgggctt
      181 ctttgatcct gagaatgtgc ccctgcagcg caggagcgga aggattttca ggtggaaaat
      241 ctccggtcca gttcacctgc ttgcgattgg cgaggcgcat gtgcggtcca acgaacttcc
      301 atccgtggcc gttctgctcg cgcacggcga tgttgaaacc catttgcccg tcctggtgct
      361 ctacgtcgcg ccactcgaac aatgatgctt ccagctcttc cgccagcgcc tcatggggtg
      421 agaggcagag aatccagtca ttacgcgcgt cctgaacgta agctccgtgg tcaactccgc
      481 tcactccgtt caccacgcgc gcgccgtgat cgcgggcgac cttcaccgtg tcgtccgtgg
      541 agccatggtc tatcaccacc acatcatcgc tggggcggag tgaatcgaga gcacgaccga
      601 gttgaagggc gtggttgcaa gtgtggatca ggacgctgaa cttcgtttta gccatcgcgc
      661 tttgttggat gccgccagcc agagctgcgc gtctgcgact cagatgaaaa tcgcgctgct
      721 cgctgctgtg gcacgccttg caccaaatct gccgcaaaaa gaaacgccgt caggcggacg
      781 gcgcttcttc atacaacctc tgcaaccgtt actggttcat ggcctggcga tttgctccag
      841 gtgtgaccga aattgagttc tgcaactgga agctgagcat ggtttccggt ttaagcagaa
      901 tctgctggcc cttggtcgcg gccgaaacac cggttcccgc gcccgcaccg gcagcggcgc
      961 caatcgctgc gccttttccg ccaccaaata tcccgcccag aatcgcgccc accgcggctc
     1021 cgccacccac cttggcagcc gtggccttac cgcgtccatt tccctgcttt gaccagcggt
     1081 cagtctggat ggagtagctc ttgccgttca tcatgatccg agtcagttcg atcaccagat
     1141 ctgattgtcc ggcgaaccgc ccggccgact taacgtctac tacgcggccc tcaacgtccg
     1201 ctgtggtcgg gatcaccgtt ttaccctcaa ccacgaccgg cgacgaaatt gatccgtgga
     1261 aggtatctcc cacctgcgac ttctccgaat ccagcgtatc gttcagccga atgctgagct
     1321 gcgttcctga aggaatcgtg atcggctgcg gcaccggcgg cggaggcggc gtattgttcg
     1381 ccgtgttgtc atagctgctc gacccgccat tgctgctgtt tccgttcatt cccggaggcg
     1441 gcgcgctcgc ggtgctggac ggaggtactg tggtcctcag cccgttgtcc ccattatcgc
     1501 tgtttcttga tgaagccgag tggctccgct ttggcgacgg ccgactgcgc tcttccctcg
     1561 ccggcggagc attgttctgt tgctgctgtg cctgctgatc ggcaggattc tgcatcggct
     1621 cattgccggc tgaagtcggc gcaacctgca ggttgttcac caccgtcttc acgccttcaa
     1681 tctgtgccgc gtcattggcg gccgcgtttc gcgccgcgtc actgctcacg tttccggaga
     1741 gcgtcaccac gccgctggtg gagttgatcg tcacctgctt atccggaacg gcgctgtcgg
     1801 tattgatctt gctctgaacg tcctgcgcaa tctgcgcgtc cggacggctc gtattgcgcg
     1861 agcagcccgc ccccagcagg gcaagcgacc ccaggacgaa acccagaaga tatctcctca
     1921 taaaaccatt gctcctgtaa cttggtggct gtaagcgttt agatgcagag ctgccggatt
     1981 cgactgcatc ccgttgtaaa gttttgtcgg ccagtcagtt acgctcaatc ccggcattct
     2041 cacacgtgct cttcttctcc cgattctaac cccgtcagcc accatgagtt tcgcgaatcg
     2101 ccacctaact gcccttaagt aaccgcctaa tccctgagta ggttaagccc ctacctacgg
     2161 cggccctcgt cccccgcaaa aggccatttc ttgccatctc cggaggctct gccgatcact
     2221 ttccagctgc gctcaccgtc acgcgtgcgc cttctgaatc cacaaattgc gccagctcgc
     2281 cgccgaaatc ctgcttttcc gga
//
LOCUS       DASQYP010000002         5027 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_296386, whole genome shotgun sequence.
ACCESSION   DASQYP010000002 DASQYP010000000
VERSION     DASQYP010000002.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 5027)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5027)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5027
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_296386"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            335..718
                     /locus_tag="VE783_00015"
     CDS             335..718
                     /locus_tag="VE783_00015"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HYX51805.1"
                     /translation="MPSPPSSPVTDLKCFVPAKDPELSRKFYSDLGFTINWSNEQVAE
                     LQIGSFRFLLQTFYVAEHAGNFMMSLAVEDADAWWEHIQRQELATKYPGIMCKPPVMQ
                     PWGLRTLCLSDPTGVLWHITDRKKS"
     gene            complement(845..2290)
                     /locus_tag="VE783_00020"
     CDS             complement(845..2290)
                     /locus_tag="VE783_00020"
                     /inference="COORDINATES: protein motif:HMM:NF014336.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0004519 - endonuclease activity [Evidence
                     IEA];
                     GO_process: GO:0006308 - DNA catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S1/P1 nuclease"
                     /protein_id="HYX51806.1"
                     /translation="MKVASKLLVVALTIGISTNLFGWSAEGHQTVADIATTLLQQSGQ
                     FGPVQTLLGNLTLAQISTCADELRAFQSSGTAMSAPCQQVFANPAPPTNTSSWHFIDI
                     DVSIANPTHTDVVNACGTACVVSEIEFWRGVLADTTQTNGERLQALAFLVHFIGDIHQ
                     PLHSATRGTDAGGNAENVRIDGGTTSLHHAWDANLVSDINSNAATLAGLLSAEIASAQ
                     AEAQTTSENWAIQSFQFAKTVAYAGIPTTNTTTTLSTTYIANAEPVVRQQLARGGVRL
                     AQALAAALSGGTPTPTPTPTPTPTPSPSPTPTPTPSPTPNPGATELLGNKGFEAGAAN
                     PSPWVLTSTHSPIQIINSSASEPPHSGTFDAWMLGWGTTTTDTLLQQVTIPSSVTSAT
                     LTFWLHVDTAETTTTSMFDTLQVQVRDSAGNVLQTLATYSNLNKATGYTQKSFNLNAY
                     IGKTIQIFFLAKEDFTLQTSFVVDDTSLLVQ"
     gene            complement(2614..3654)
                     /locus_tag="VE783_00025"
     CDS             complement(2614..3654)
                     /locus_tag="VE783_00025"
                     /inference="COORDINATES: protein motif:HMM:NF025072.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HYX51807.1"
                     /translation="MRVALIAPPFIEVPPREYGGTELFIGHLAEELQAQGVDVVLYSN
                     GESSIGVENRWLFPHSQWPIKNQEHAQLKDLDHTSWAVKDAERDCDLIHLNAAQGLVC
                     SRFTRKPIVYTIHHTGLEYLSQFYSRFPQVNYVCISGFQCEREPVPKKRTIHHGIRVS
                     DYRMQARKQQYLSFIGRIAPIKGTHLAIEIAKQSGVPLKIAGEIQPAFREYFESKIKP
                     QIDGKFIEYVGLADLAAKNELLGNSLAMLFPIQWHEPFGLVMVEAMACGTPVLALRSG
                     SVPEVVQDGVSGFVRGRAKELAKCVAQLPLPAEAVRAYVEERFSMQRMARDYIKLYSE
                     VLESARQEKSAA"
     gene            4196..>5027
                     /gene="dnaG"
                     /locus_tag="VE783_00030"
     CDS             4196..>5027
                     /gene="dnaG"
                     /locus_tag="VE783_00030"
                     /inference="COORDINATES: protein motif:HMM:TIGR01391.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003896 - DNA primase activity [Evidence
                     IEA];
                     GO_process: GO:0006269 - DNA replication, synthesis of RNA
                     primer [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA primase"
                     /protein_id="HYX51808.1"
                     /translation="MTIASDVKEMVRQQADIVRVVGDYVKLRKTGAQNFGGLCPFHQE
                     KTPSFSVHATRQFYHCFGCGASGDVFSFVQKIENISFPEAVRLIAQKLDIKLPKTQYS
                     SEFEAKDARLRGQLMEMHEKACAFFEDQLRRPEAAQARQYLSGRGLTEETIREFKMGY
                     APDSGFLLKDRLKGDYTEELLRESGLFSWKEGAEAGNIYSKFRNRITFPICNEQGRVI
                     AFTARTLATDEKAGPKYLNSPETAIYSKGRVLYNLDTAKDAIRKLDYAVIVEGQMDCI
                     S"
BASE COUNT         1021 a         1415 c         1582 g         1009 t
ORIGIN      
        1 aatagtccca ttgctcctcg ttgtcccgga cccgcagaag agtcacctgt tccgaattga
       61 tcggttctgt tagccatcca cgcgagtcgg cgaaggcggt ggcggtactc accacagcgc
      121 ggaacgcgtc ttcacccaga aggtgcccat cgaaatggat tgtcactccc attgctaaac
      181 gaaacgatat accaagaggt gcgccgtgga aacaccagtg cgcggagccg caagggtgga
      241 gcagccattc acgggctgtg gtaaaggcgc tgaactcaag aaggacctcg ccgctctata
      301 atccacccgc attcacgaac gaggagcctg aaccatgcca tcgccaccgt ccagcccggt
      361 tactgacctg aaatgctttg tgcccgcaaa agatcctgag ctctctcgca agttctattc
      421 ggacctgggg ttcaccatca actggagcaa tgagcaggtc gcggagctgc agatcggctc
      481 attccggttc ctgctgcaga ccttctacgt ggccgagcat gccggcaatt tcatgatgag
      541 cctggccgtg gaagacgccg acgcctggtg ggagcacata cagcggcagg agctggcgac
      601 gaagtatccg ggcatcatgt gcaagccgcc ggtaatgcag ccctggggcc tgcgcacact
      661 ctgcctgagc gatccaaccg gcgtgctctg gcatatcacg gacaggaaga aaagctgacc
      721 ggccaaaatc tttcaccgca aagggcgcaa aggacgcaaa ggagatgcgt ttctgaaaag
      781 gcccgccggt ttcccgacgg gccttttgcc ttggctaatt gctaactgct atttgccaat
      841 tgctctactg caccagcaac gacgtatcgt caaccacgaa cgaggtctgc agcgtgaagt
      901 cctccttggc aaggaagaat atctggatcg tcttcccgat gtaggcattc aggttgaagc
      961 tcttttgcgt gtagccggtg gctttgttca ggttggaata ggtcgccagg gtttgcagca
     1021 cgttgccggc ggagtcgcgc acctggacct gaagcgtatc gaacattgag gtggtggtgg
     1081 tctccgccgt atccacgtgc agccagaagg tgagcgtggc ggaggtcacg ctgcttggaa
     1141 tcgttacctg ctgcagcagc gtgtcagtgg tggtggtgcc ccagccgagc atccatgcgt
     1201 caaaggtgcc gctgtgcggc ggctcgctgg cggagctgtt gatgatctgg atgggcgagt
     1261 gcgtggacgt cagcacccag ggcgagggat tcgccgcgcc ggcttcaaat cccttattgc
     1321 ccagcagctc agttgctccg gggttgggag ttggcgaagg cgtgggcgtg ggagtcggag
     1381 agggcgacgg agtcggagta ggagttggtg taggagttgg tgtaggagtt ccgccgctca
     1441 aggctgcagc aagcgcctgc gccagacgca cgccgccgcg cgccagctgc tgccgaacta
     1501 ccggctcggc attcgcgatg taagtggtcg agagagtggt cgtcgtgttg gtggtgggga
     1561 tgcccgcgta agccacggtc ttggcgaact ggaatgactg gatggcccag ttctctgaag
     1621 ttgtctgcgc ttcggcctgc gcagaggcaa tctcagcgct gagcaggccg gccagcgtgg
     1681 cggcgttgga gttgatgtcg ctcaccaggt tggcgtccca tgcgtgatgc agtgaggtgg
     1741 tgccgccatc gatgcgcacg ttttcggcat tgccgccggc gtctgtgccg cgcgtggccg
     1801 agtgcagcgg ctggtgaatg tctccgataa agtgcaccag gaaggccagc gcctgcaggc
     1861 gctcgccgtt ggtttgcgtg gtatccgcca gcacgccgcg ccagaactcg atttcgctga
     1921 ccacgcaggc tgtgccgcag gcgtttacca cgtcagtatg cgtgggattc gcgatggaaa
     1981 catcaatatc aataaagtgc cagctgctgg tgttggtggg cggcgcggga ttggcaaaga
     2041 cctgctggca gggcgcgctc atggccgtgc cgctggattg gaaggcgcgc agctcgtctg
     2101 cgcaggtgga gatctgcgcc agagtaagat tgcccagcag ggtctgcacc gggccaaact
     2161 ggcccgactg ctggagcagc gtggtagcta tgtccgcgac ggtctggtgg ccttctgccg
     2221 accagccaaa caggttggtg cttatgccaa tggtcaaggc gacaaccaat agcttgcttg
     2281 caactttcat tcgttctttt cctccagggt ttgagcagga tcatcaccgc attgcccgtc
     2341 gactctcgag gaaagaagct atcgtactca ggttgcgaat gaacgctgga gcaatgaaaa
     2401 tcctgtgaaa aacggaaagg cagttccaaa atggaaccag aggcagaaca gcgttcaccg
     2461 cagaggacgc aaagaaggca ttttagccgc gaatgaacgc gaaaacgcgc gaatcaagga
     2521 tgtggccttt ggcccttggc ggttggcctt tggcaaaacc aaaacctttc accgcaaagg
     2581 acgcagagga cgcaacgagg ccgcgatggc ctttcacgct gcgctctttt cttgccgggc
     2641 gctttccagc acttcgctat acagcttgat gtagtcgcgg gccatgcgct gcatggagaa
     2701 gcgctcttcc acgtaggcgc gcacggcttc cgccggaagc ggaagctggg ccacgcattt
     2761 ggccagttcc ttggcccgtc cgcgcacaaa gccggagacg ccgtcctgca ccacctcagg
     2821 cactgagccg ctgcgcagcg ccagcaccgg agtgccgcag gccatggctt ccaccatcac
     2881 cagcccgaac ggctcatgcc actggatggg aaacagcatg gccagcgagt tgcccagcag
     2941 ctcgtttttt gccgcaagat cggccaggcc cacgtactca atgaacttgc cgtcaatctg
     3001 cggcttgatc ttgctttcaa agtactcgcg aaaggccggc tggatctcac cggcaatctt
     3061 cagcggcacg ccggactgct tggcgatctc aatggccagg tgcgttccct tgatgggcgc
     3121 aatgcgtccg atgaagctca ggtactgctg cttccgggcc tgcatgcggt agtcggaaac
     3181 ccggatgccg tgatggatgg tgcgcttctt gggcaccggc tcgcgctcac actgaaagcc
     3241 gctgatgcag acgtagttga cctggggaaa gcggctgtaa aactggctga ggtactcgag
     3301 cccggtgtgg tggatggtgt agacaatggg cttgcgggtg aagcgcgaac acaccaaccc
     3361 ctgtgcggcg ttaaggtgaa tgaggtcgca gtcgcgctct gcgtccttga ccgcccagct
     3421 ggtgtggtca aggtctttga gttgcgcgtg ctcctggttc ttgatgggcc attgcgaatg
     3481 agggaaaagc cagcggttct ccacaccgat tgacgattcg ccgttggagt acagcaccac
     3541 atccacgccc tgcgcctgga gctcttccgc caggtgtccg atgaacagct ctgtaccgcc
     3601 gtactcgcgc ggcgggactt cgataaaagg cggtgcgatc agcgcaacac gcacgtttgt
     3661 gcctccccat gtggttagat gtgggaagca gagcgggagg acgagagcgg caggattggc
     3721 cgctaatgaa cgcgaatcga accagaatga ccttttacaa aatctcaatg agcgggggtg
     3781 ctcccaagca ggcatgaaaa tgcttttccg ccgcttttat cctgtcgctt cgctttgctg
     3841 cgctccggcc tgcggcagct cggaaggata ttcttcccag cttacccagc ccttattcct
     3901 cagtcgcttc gctccttcgg aaacggactg ggctaacttc tgccgcgcct gacggcgctg
     3961 gagtatcgtg agtgacagac cgtagtaact cccggttgca ttttcgagaa gagaccgaag
     4021 caacacaaaa tctaatcgcg ggttttcctt tgtgtccttt gtggtaaagc tgttccccga
     4081 agcagcgtgg ttccggcggc aagtcccggc ccggttttcc acaacgctgc acagcttctc
     4141 ccgtttccac ggagcgggat ttccagcaca ataagagcgg atcaccctca ccccaatgac
     4201 gattgccagc gacgtaaaag agatggtgcg gcagcaggcg gacattgtcc gcgtggtggg
     4261 ggactatgtg aagctgcgca agaccggcgc ccagaacttt ggtgggctgt gcccgttcca
     4321 ccaggaaaag acgccgtcgt tttccgtgca tgccacgcgg cagttctacc actgctttgg
     4381 gtgtggcgcg tcgggcgacg tgttcagctt tgtgcagaag attgagaaca tcagctttcc
     4441 ggaggcggtg aggctgattg cacagaagct ggatatcaag ctcccgaaga cgcagtacag
     4501 ctctgagttt gaagccaaag acgcgcggct gcgcgggcag ttgatggaaa tgcacgagaa
     4561 ggcctgcgcg ttttttgagg accagctcag gcggcccgag gcggcgcagg cgcggcagta
     4621 tctgagcgga cgcggactca cggaagagac gatccgcgag ttcaagatgg gctacgcgcc
     4681 ggattccggg ttcctgctga aagaccggct caagggcgac tacacggaag agctgctgcg
     4741 cgagtcggga ttgttttcct ggaaggaagg cgccgaggcg ggcaacatct attccaagtt
     4801 ccgcaaccgg attactttcc ccatttgcaa cgagcagggc cgggtgattg ccttcaccgc
     4861 acgcacgctg gcgaccgacg aaaaggccgg gccgaaatac ctgaactcgc cggagacggc
     4921 gatctattcc aaggggcgcg tgctctacaa cctggacaca gccaaggatg cgatccgcaa
     4981 gctggactac gccgtgattg tggaaggcca gatggactgc atctccg
//
LOCUS       DASQYP010000003         2641 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_63600, whole genome shotgun sequence.
ACCESSION   DASQYP010000003 DASQYP010000000
VERSION     DASQYP010000003.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 2641)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2641)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2641
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_63600"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..857
                     /locus_tag="VE783_00035"
     CDS             <1..857
                     /locus_tag="VE783_00035"
                     /inference="COORDINATES: protein motif:HMM:NF024853.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="thioredoxin domain-containing protein"
                     /protein_id="HYX51809.1"
                     /translation="NPGSALPQEVRRKAESLIRTQYNVPPYVKMQFSDPKPSDYPGYD
                     SVTVTFTGQKVTTYDFLISKDRKTLARLEKMDLSADPMAKIDVKGRPVRGNPNAKVTI
                     VNFDDFECPFCSRFHATLFPGLMKQYGDKVKVIYKDYPLVEIHPWAMHAAVDANCLAD
                     QNNDAYWEFADYVHQNQTSISPSRGSEPNWTESFNKLDSIARDQGKKHSVNETKLNAC
                     MQKQDETAIRASMAEADGMQIDSTPTMFINGERLSGAVPEDQMKQILDRIIAESGETT
                     PAATNAKK"
     gene            918..1982
                     /locus_tag="VE783_00040"
     CDS             918..1982
                     /locus_tag="VE783_00040"
                     /inference="COORDINATES: protein motif:HMM:NF024545.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SurA N-terminal domain-containing protein"
                     /protein_id="HYX51810.1"
                     /translation="MIGTLTSRSVCAAGLACMVIVFAGISGCNSGPGGQDVMAKVNSY
                     KILRTEVDKSYNSQVAGSPQKPTAAEEEALRLQILEHLIDLQIHLQQADKLGVMATDD
                     EVESKFNQLKAPYTQEEFQKRLKDQNLTDADLKQDIRRNLTIEKLLNKEIASKVTISD
                     SDITNYYNQHKPDFNLIEPRYHVSQIQVLVGQPAQPGAKAQTDAEAKQKIQMIYNRLE
                     SGEDFAQLAGQWSDDPETAHNGGDLGTIPESALKSTDAPTREAIQKLKPGQYSQVISV
                     INPANRQLVGYRIVKLINKELAGQRDLNDPAVQQWIRTQLRTQREQLLRAAYDEVLRN
                     KADVHNYYAEQIMKTNANQK"
     gene            complement(2006..2503)
                     /locus_tag="VE783_00045"
     CDS             complement(2006..2503)
                     /locus_tag="VE783_00045"
                     /inference="COORDINATES: protein motif:HMM:NF012584.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin/lipoyl-containing protein"
                     /protein_id="HYX51811.1"
                     /translation="MIYEVAVAGKTHKLELLREGAHWRCKLDGADIAVDAVPTRENVL
                     SILIGGKSYEVKEEFIGSESNIVVGNQRFPATVRDPRSLRSRRGSAIGLEGVKKINAP
                     MPGKVVRVLAPAGTEVEAGQGVIVIEAMKMQNELKSPKKGVVKKLNVAEGAAVEAGQA
                     LAEVE"
BASE COUNT          657 a          729 c          749 g          506 t
ORIGIN      
        1 caaaccccgg ctccgctctt ccgcaggaag tgcggaggaa ggcagagtca ctcatccgga
       61 cgcaatacaa cgtaccgccg tacgtgaaaa tgcaattttc tgatccgaag cccagcgatt
      121 atccaggtta tgacagcgtc acggtcacat tcaccggcca aaaggtgacg acctacgact
      181 ttctgatctc gaaagaccgc aaaacgctcg cccggctgga gaagatggat ctttctgccg
      241 acccaatggc aaagatcgac gtgaaagggc ggccggtgag gggaaatccc aacgccaagg
      301 tcacaatcgt gaactttgac gatttcgaat gcccattctg ctcgcgtttt cacgccacct
      361 tgttccccgg cctgatgaaa cagtacggcg acaaagtgaa agttatttac aaggattacc
      421 cgctggtgga gatccatccc tgggcaatgc acgctgctgt ggacgccaat tgtctggccg
      481 atcaaaacaa cgatgcctac tgggagtttg ccgactacgt gcaccagaac cagacgtcca
      541 tctcgccgtc acgcggcagc gaaccgaatt ggacggaatc tttcaacaaa ctggacagca
      601 tcgctcggga ccagggcaag aagcacagcg tgaatgaaac caaactgaat gcatgcatgc
      661 agaagcagga tgaaaccgcc atccgcgcat ccatggcgga agccgatggg atgcagatcg
      721 attcgacgcc caccatgttc atcaatggag aaaggctctc cggggcagtt ccggaggacc
      781 agatgaagca gattctcgat cgaattatcg ccgagtcggg cgagacaacg cctgcagcaa
      841 caaacgcaaa gaagtagatt cacaagggaa tctcgggtat cgtacctgtg ctgaacaggg
      901 cgtgaggagg caaacgtttg attggaacgc tgacaagccg aagtgtttgt gcagcaggcc
      961 tggcctgcat ggtcatcgtc tttgcaggga tcagcggttg caattccggc cccggcgggc
     1021 aggatgtgat ggcgaaggtc aacagctata agatcctgcg caccgaagtg gacaagagtt
     1081 acaacagcca ggttgccgga tccccgcaaa agcccaccgc agctgaagag gaagcgttgc
     1141 ggctccagat cctggaacat ctcattgacc tgcagatcca tctccagcaa gccgacaagc
     1201 tcggcgttat ggccacggat gacgaagtgg agagtaagtt caaccagctt aaggcgccct
     1261 atacgcaaga agaatttcag aaacggctca aggaccagaa cctgacggac gctgatctga
     1321 agcaggatat acggcggaat ctgacgattg aaaagttgct gaacaaggaa attgcttcca
     1381 aggtcacgat ttcagatagt gacatcacca actactacaa ccagcacaag ccggacttca
     1441 atctgattga gccccgttac cacgtgtcgc agatccaggt gctggtcggg cagcctgccc
     1501 agccgggagc caaagcgcag acggatgcgg aggcgaaaca aaagatccag atgatctaca
     1561 accggctgga gagtggggag gatttcgctc agctcgcggg acagtggtca gacgatccag
     1621 agacggcgca caatggtggg gaccttggaa ccattccgga atcagcgttg aagagtaccg
     1681 acgcaccaac gcgcgaagcc attcagaagc tgaagcctgg ccagtacagc caggtgatct
     1741 cagtgatcaa tcccgccaac cgccaactgg ttggatatcg gatcgtaaag ctgatcaaca
     1801 aagaattggc ggggcagcgc gacctgaacg acccggcggt gcagcaatgg atcaggacgc
     1861 agcttcgcac gcaacgcgag cagttgctgc gtgccgctta cgatgaggta ctgcgcaaca
     1921 aggcagatgt ccacaattac tacgctgagc agatcatgaa gacaaatgcg aatcagaaat
     1981 aggtgaggat gtaaaagggg cggggctatt cgacttcggc cagggcctgt cctgcttcaa
     2041 ctgcggcccc ttctgccaca ttcagctttt tcactacgcc ttttttgggc gacttcagct
     2101 cgttctgcat tttcatggct tcaatcacaa tcacgccctg acctgcttcc acttcagtgc
     2161 ctgcgggagc aagcacacgg accactttgc cgggcatggg tgcgttgatc ttctttacgc
     2221 cttccaggcc gatggccgag ccgcggcgag agcggagaga tcgcggatca cgtacagtag
     2281 cgggaaagcg ctggttgccc accacaatgt tcgattcaga accaatgaac tcttctttga
     2341 cttcgtaaga cttcccgcca atcaggattg agagcacgtt ttcgcgggtg gggacggcgt
     2401 ccacggcgat gtcggcgcca tcgagcttgc agcgccagtg tgccccttcg cgcagaagct
     2461 ccagtttgtg ggttttgccg gcgaccgcga cctcgtagat catggctcgc gtactccttc
     2521 cagccgagcg gctttcttcc atgccgatgt gccattctgt gaaccattgc cgttggccgc
     2581 ttggcccgaa ccgttggccg gcggtttcgc tgtcgccgtg aaaagggctg cggcgatggc
     2641 g
//
LOCUS       DASQYP010000004         5433 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_169487, whole genome shotgun sequence.
ACCESSION   DASQYP010000004 DASQYP010000000
VERSION     DASQYP010000004.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 5433)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5433)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5433
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_169487"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            352..684
                     /locus_tag="VE783_00050"
     CDS             352..684
                     /locus_tag="VE783_00050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007182542.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="antibiotic biosynthesis monooxygenase"
                     /protein_id="HYX51812.1"
                     /translation="MAENAKLALWVRLVAKSGKENEVDQFLRSAVPLVQQETGTTSWF
                     AIRLNNNTFGIFDTFADETGRQAHLQGQVAAALMAKAGELLAEAPQINKVDVLASVIP
                     DKAANKAA"
     gene            complement(915..1742)
                     /locus_tag="VE783_00055"
     CDS             complement(915..1742)
                     /locus_tag="VE783_00055"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX51813.1"
                     /translation="MAFTPTKMQIIHKVTFEGTKAAEFRELGVSMVRISPESPLINML
                     QFTMAEDDSRWKKTHSIIKKLGALDFAETRFTPYEFDRAQFLAVLPSWHHGYPQPEED
                     FQYKKTTYDLSHYCSACQIGARQVAPFQMKRPPIWGEKSVLQLNWVFDEYFVKPETWK
                     RVFERFGIKCRPVLQHPSGQEMETVVQLDISERAELLMESYPRVQCQRCGTRSYQHVN
                     GFFPSPAATGQHLFKSLQWFGAGSVPVQAVVVSQALYRAIQDAKIRGLEFQACLPPQ"
     gene            1894..2637
                     /locus_tag="VE783_00060"
     CDS             1894..2637
                     /locus_tag="VE783_00060"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX51814.1"
                     /translation="MKTWFKGLIVFVFSTVVTSIAANQLDPAAFSFSRSGFVKLASLA
                     AVIGAKAVYLYLKQSPLPGSAPIDWGRISGAVLLIALLPVLVSTTGCYSSWEQTTYST
                     LATSKAVIDCAVAGYNRFDADIRHACTAQPEDPAFDPKTFYLPQTREAQQAIEKARQV
                     QVACVEAFAGYAVAKVAKDKQADVAEKQAAVVSYLAQLPALLDAVRALMGKPPQWQSY
                     LEPRDFRDPSVAMRSLQPKYETSNFVEVR"
     gene            2640..2909
                     /locus_tag="VE783_00065"
     CDS             2640..2909
                     /locus_tag="VE783_00065"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX51815.1"
                     /translation="MTPAISFNADQLRNVVSTATEIAAEIEKLVGASLGGSFNDPQIE
                     RLTLLLGNLAAVAIQAVHQSQGKAITPESILALMPTSADYVPPVA"
     gene            3095..4060
                     /locus_tag="VE783_00070"
     CDS             3095..4060
                     /locus_tag="VE783_00070"
                     /inference="COORDINATES: protein motif:HMM:NF012798.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HYX51816.1"
                     /translation="MLGKPVLPAQFRLLPFEQAAERWLEMKKLHTRKPRTMEMYEWYI
                     RNLSRIFGGLLLSQINIGHVLEYQQQRRMTAGASCVNHEINTLSQMLRYAELWDLIAR
                     HYRPLPLPNWTPPKVLSAEQEEKFFRVVSQNSDWSVAYWAVSLTNNTSAMGTELRNLQ
                     MKDVFLDHDPPTVHVPDSKVKNEFRARVVPLNEVAHKQMRRIVERASRLGAYHPDHYI
                     FPFRLARSRYDVTRPASPNFIRSAFRSMRKATGLDWLQPRNFRNQVITKLFESGIPDE
                     TIISIAGHQSIRMSRYYSRIRINAKAEALRAICPAQSSPANRSSL"
     gene            4535..>5433
                     /locus_tag="VE783_00075"
     CDS             4535..>5433
                     /locus_tag="VE783_00075"
                     /inference="COORDINATES: protein motif:HMM:NF013015.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX51817.1"
                     /translation="MRGCCIAAPEFYIQAVFRNDDRIIVKQRAVAVLEGPKSSVKVFT
                     CNSKAREAGVFPGMSKAKAQSWQNILLLKRSQRSEENAQATLLDCGFAVSRLVENTYP
                     GIVLCDVTGTERLLGPPENTAKKLLEIACWCGLDTNIAIAPNPDAALHAARGFPGITI
                     IGSGQERRVLAPLPLEVLDANPETLDKLRSWGVRTFRDLADLPAEAIVQRLGPVGFRL
                     QQMAQGCSRRELIPVIPAPSFQEKVEPEEPLDCLEAVGSTAQKLLDHIVTRLNSRSLA
                     ARELHLELALEINVDRELSSIRYG"
BASE COUNT         1216 a         1417 c         1554 g         1246 t
ORIGIN      
        1 gcagggatat tcctgctcct atggaagtac gaaccgccgc cttttttcaa tgtgcgccaa
       61 ctttgggcgg cagactgtga ttcttccggc acaggcgagg cgcctgtgct acacagttaa
      121 caagagctac gttcagcgcg caggagagaa gtcgcccgag cgatcaaatc aacagccccg
      181 tattaggtgg ttgactcatt tttgagatcg cttctagttt cattaacaca ttctgaatcc
      241 ccagcttttg acgcgtgaat attctttcca tcgctctccg cagcccgcac atctgactca
      301 cgatgtattt tgtgattcaa tatggtggtt tgatatcgaa aggagaagca aatggcagaa
      361 aacgcaaagc tggcactgtg ggtacgcctg gtggcgaaat ccggaaaaga aaatgaagtg
      421 gaccagttcc ttcgcagcgc cgttcccctt gttcaacagg agaccggcac gacgagctgg
      481 ttcgctatac gcctgaacaa caacacattc ggcatctttg atacctttgc cgacgagacc
      541 ggacgccagg cccatctgca gggacaggtg gcggctgccc tgatggcaaa agccggcgaa
      601 ctgctggccg aggcgccaca aattaataaa gtagacgttc tggccagcgt gattccggac
      661 aaggcggcga acaaagcagc atagatattt tgcggtctat gagcggcggc gcggagtgtg
      721 cgtcgccgtt tttgtatacg agctatcaca accgggcgtc gcacccgcgt agttccaact
      781 catgtgagac acaaatttat accaagtatt ctgcggcaag tttgggcaag gccgcgaata
      841 aatctgcata cgacaaccgg taaatgcgtg agcggcggcc cggagtgtgc gtcgccgttt
      901 ttcaacgatt caggctattg cggtggcagg caggcctgga attcgagccc gcgaatcttc
      961 gcgtcctgta tggcgcgata gagggcttgc gacaccacta ctgcctgtac gggcacggat
     1021 ccggcgccga accactgcaa agacttgaat agatgttgcc cggtagcagc cggcgaggga
     1081 aagaagccat tcacgtgctg gtatgacctg gtgccgcacc tttggcactg cacgcgtggg
     1141 tagctttcca taagcagctc agcgcgctca gagatatcaa gctgcaccac cgtttccatc
     1201 tcctggcctg aggggtgttg gagtacgggc cggcacttga taccgaaccg ctcaaaaacg
     1261 cgcttccatg tctccggttt cacaaagtat tcatcgaata cccagttaag ctgcagaacc
     1321 gatttttcac cccagatggg cggccttttc atctggaatg gggccacctg ccgggcgccg
     1381 atctggcagg cggaacagta gtggcttaga tcataggtgg ttttcttgta ctggaaatct
     1441 tcttccggtt gcggatagcc gtgatgccat gacgggagca ctgccagaaa ctgagctcga
     1501 tcgaactcat agggcgtgaa tctggtttca gcgaaatcca aggctcccag ctttttgatg
     1561 atgctgtggg tctttttcca gcgcgagtcg tcctcagcca tggtgaattg cagcatgtta
     1621 atcagcgggc tttccggaga gatgcggacc atgctgacgc cgagttccct gaactctgcc
     1681 gctttggtgc cttcaaaggt gaccttgtga atgatctgca ttttggtggg tgtgaacgcc
     1741 aagtgtaagc cataatcctg attcaacaaa gttatctcac ctctacctgc tctcaatcct
     1801 tcatttcacc ccaaaaaaac aacgccagag gctgtgagcc aacggccatt caagctagca
     1861 gccaggagct actagccagg agcttctttt cgtatgaaaa catggttcaa aggattaatt
     1921 gtctttgtct tcagcacggt ggtcacgagc attgccgcca accagcttga tccagcagct
     1981 ttcagctttt cccgctcggg tttcgtgaag ctggcgtcac ttgcggcggt gatcggcgcg
     2041 aaggctgttt atctgtatct gaagcagtct ccgctgccgg gcagcgcgcc gattgactgg
     2101 ggccgcatct ccggcgctgt gctgctgatt gcgcttttgc cggtgctggt gagtacaacc
     2161 ggctgttaca gctcatggga gcagacgacc tattcaacgc ttgccaccag caaagcagtg
     2221 attgactgcg ccgtagccgg ctacaaccgc tttgatgccg acattcgcca cgcctgtacg
     2281 gcgcagccgg aggatcctgc gtttgatccc aagacttttt atctgccgca aacccgcgaa
     2341 gcgcagcagg cgatagaaaa agcccgacag gtgcaggtgg cgtgcgtgga ggcgtttgcc
     2401 ggatacgcgg tggcaaaggt agcgaaagac aagcaggcgg acgtcgcgga aaagcaagct
     2461 gcggtggttt cgtatctggc gcaactgccg gcgctgctgg atgcagtgcg cgcgctgatg
     2521 ggcaaaccgc cgcagtggca gagctacctg gagccacgag atttccgcga tccttccgtg
     2581 gcgatgcgtt cgctccaacc gaaatatgag acttcaaact tcgtggaggt gcggtaatca
     2641 tgacgccagc tatttctttc aatgccgacc agcttcgcaa cgtggtcagc acagcaaccg
     2701 aaatcgccgc agaaattgag aagcttgtgg gcgcttctct gggcggaagc ttcaatgatc
     2761 cgcagattga gcgcctgact ctgctgctgg ggaacctggc cgcggtggcg attcaggcag
     2821 tgcaccagtc gcaggggaag gcgatcacgc cggagagcat tctggcgctg atgccgacct
     2881 cggccgatta tgtgccgccg gtcgcatgag cgaattgccg cataaacagt gcacttttgc
     2941 catttcctca agctattgtg gtggccttgg gggaggcaac cccatatttt gttgtagcga
     3001 aagtacgacg aaatacgcta aagtttcgcc atacccaagg agcttggctc cgggcctccc
     3061 acctagcctg acgagccggc tagaggaagg ctggatgtta gggaaacccg ttttacctgc
     3121 acaattccgt ctgctgccgt ttgagcaggc ggcggaacgt tggctggaga tgaaaaagct
     3181 gcacacacgc aaaccgcgga cgatggagat gtacgagtgg tacatccgca atctcagccg
     3241 gatattcggc gggctgctgc tatcgcaaat caacattggg cacgtgctcg agtatcagca
     3301 gcagcgccgg atgacggctg gggcgtcgtg cgtcaaccat gaaatcaata cgctctccca
     3361 gatgctgcgc tatgccgagc tctgggacct gattgccagg cattaccggc cgctgccgct
     3421 gcccaactgg acgccaccca aggtgctgag cgcggaacag gaagaaaagt tctttcgcgt
     3481 ggtatcacaa aattctgact ggagcgtggc gtactgggcg gtgtcgctga cgaacaacac
     3541 gtcggcgatg gggacggagc tgcgcaatct gcagatgaag gacgtgtttc tggatcacga
     3601 tccgcccacc gtgcatgtgc cggattcaaa agtgaagaat gaattcaggg cgcgtgtggt
     3661 gccgctgaat gaagtcgcgc ataagcagat gagaaggatt gtggagcgcg cgtccaggct
     3721 gggcgcctat catcccgatc actatatctt tccgtttcgg ctggcgcgca gcaggtacga
     3781 cgtgacgcgt ccggcctcgc cgaactttat tcggtcggcg tttcggtcaa tgcgcaaggc
     3841 tacggggctc gattggctgc agccgcgtaa cttccgcaac caggtaatta cgaaactttt
     3901 tgagtccggc attcccgacg agacgattat ttctattgcc gggcaccagt ccatccggat
     3961 gtcgcgctac tactcgcgga tccgtatcaa cgcaaaagcc gaggcgttgc gggccatctg
     4021 ccctgcgcaa tcatctccgg ctaacaggag ttcgttatga agtggttact tccttttgtg
     4081 aagactgaac ggaattgctc ttctgaaccg tatggcaggg gctgccatta ttttttacac
     4141 aagcttcgca ggatgctatc gggtgatcat gggcggcaaa gttcatcgcc gaagcgtgag
     4201 ggggagggct gcatgcaaaa acaggagtgt gaactatcaa ggcagaaaaa tgagagctac
     4261 cagccggcct cgccggttca aggccattcc cgcaacgctc ttgttatgta ctggaaacaa
     4321 aattattgcc ccttgagtgc agctctccta atttccagac gtattcgttt ctacttgtcg
     4381 cgcttgcgag atctagtctt atcttcttcg tcaataatct ctgaaatgcg ttgcgaccct
     4441 ctgctgatca ttcagggcat ctgccttcta agcagagggt cgcagcagcg atagattaga
     4501 gtaaattcac cagacccact ctcttctttt tcccatgcgg ggttgctgca ttgccgcgcc
     4561 tgagttttat attcaggcag tttttcggaa cgatgatcgt atcatcgtta agcagcgtgc
     4621 agttgctgtt ctggaggggc ctaaatcgtc agtaaaggtg tttacgtgta actctaaagc
     4681 ccgggaggcc ggcgtttttc cgggaatgtc caaggccaag gcacagagct ggcagaacat
     4741 tctgttatta aaacggtctc aacggagtga ggagaatgca caagctactt tgctcgattg
     4801 cgggtttgct gtttccaggc tggttgaaaa cacatacccc gggattgtgt tatgcgatgt
     4861 aaccgggaca gaaaggcttt tgggtccgcc ggaaaatact gcaaagaagc tgttagagat
     4921 tgcatgttgg tgtggattgg ataccaatat tgcaattgca ccaaatcctg acgcagcact
     4981 acatgcggcg cgagggtttc ccggcataac aatcattggt tccggacagg agcgccgggt
     5041 gcttgccccg ttgccgctgg aggttctcga tgctaaccct gagaccctgg ataagctacg
     5101 aagctggggt gttcggactt tcagggacct tgctgatctg cctgcagaag caattgtgca
     5161 gcgtctcggc ccagtaggtt ttcgcttgca gcagatggcg caaggatgca gccggcgaga
     5221 gttgatcccg gtcatacccg caccttcatt tcaagaaaag gttgaaccag aagagccact
     5281 ggattgtctg gaagctgttg ggagcacggc gcagaaactg ctggaccaca ttgttacccg
     5341 gctgaattcc agatcgcttg cggcgaggga acttcatctt gagctggcat tggagataaa
     5401 tgttgatcga gaactgagtt cgatcagata tgg
//
LOCUS       DASQYP010000005        13336 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_105932, whole genome shotgun sequence.
ACCESSION   DASQYP010000005 DASQYP010000000
VERSION     DASQYP010000005.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 13336)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13336)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13336
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_105932"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            212..790
                     /gene="pyrR"
                     /locus_tag="VE783_00080"
     CDS             212..790
                     /gene="pyrR"
                     /locus_tag="VE783_00080"
                     /EC_number="2.4.2.9"
                     /inference="COORDINATES: protein motif:HMM:NF003549.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009116 - nucleoside metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional pyr operon transcriptional
                     regulator/uracil phosphoribosyltransferase PyrR"
                     /protein_id="HYX51818.1"
                     /translation="MTAGTSSRLPNLREKGRIMSASEVERTLIRLAHEIVEKNNGVEN
                     LTLVGIKRRGVPLANRLSKLIQQVEKQPLEVGTLDITLYRDDLSTVGATPMIERATPL
                     GVEIVGRNVILVDDVLYTGRTIRAAMDALFDHGRPRRVQLCVLIDRGHRELPIEAAFV
                     GRRVQTTDMEIIEVRLSEIDNEEQVMMVERTA"
     gene            795..1700
                     /locus_tag="VE783_00085"
     CDS             795..1700
                     /locus_tag="VE783_00085"
                     /EC_number="2.1.3.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR00670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004070 - aspartate carbamoyltransferase
                     activity [Evidence IEA];
                     GO_function: GO:0016597 - amino acid binding [Evidence
                     IEA];
                     GO_process: GO:0006207 - 'de novo' pyrimidine nucleobase
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0006520 - amino acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate carbamoyltransferase catalytic
                     subunit"
                     /protein_id="HYX51819.1"
                     /translation="MARTRSLLGLENLNADQISFLLKLARKMQSRPPRPLLRGKRIAL
                     LFYESSTRTRVSFEFAAKLLGTHTSIINATASSIEKGESLVDTGKTLQALGADCIVMR
                     HPASGAPNVLARNLHVPIVNAGDGMHEHPSQALLDAYTILKHRRTLKGLRVTMVGDIQ
                     HSRVVRSNVHLLSKFGAQVTLCGPPELLPENAATLASNIKISRHIDEAVRKADVVMML
                     RVQKERLAGLRLDVEKYIAHFQLTTERLKLAQKDALVMHPGPMIRSMEIQSEVADGPQ
                     AVIEEQVHNGVYVRMAILATCMGVA"
     gene            1858..3147
                     /locus_tag="VE783_00090"
     CDS             1858..3147
                     /locus_tag="VE783_00090"
                     /EC_number="3.5.2.3"
                     /inference="COORDINATES: protein motif:HMM:TIGR00857.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004151 - dihydroorotase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroorotase"
                     /protein_id="HYX51820.1"
                     /translation="MAFKTLSIRGGTLIDPSQHLEGKYDLLLKDGRVAEVAAPGKLKG
                     KADESIDARGLVVCPGLIDIHVHLREPGQSHKETIATGTLAAAAGGFTSVCCMPNTNP
                     INDNPAITRWMLDPERGAHVNVFPIGAATLGSKGEQLTDFSMLKRAGAVAVTDDGKPI
                     LHDAVMRQALLGAGRLGIPVIQHAEDTTMTAGSMMNAGPTAFRLGLRGWPAEAESNLV
                     ERDIRLAAETRGHYHVAHLSTAAALKAVRKAKRDKLNVTCEVTPHHFVLLDEDVGDYQ
                     TNFKMNPPLRSRADLEALLAGLADGAIDCIATDHAPHAANEKNQEFDYAPFGITGLET
                     AVGLSISVLHARNKIPLSRIIELLSTNPARVMGLEGRGTLKVGSHADLTIFDPAKKWA
                     YVAAESKSKSKNSPFDGWKMQGRVAATVVGGSVKYRA"
     gene            complement(3602..3802)
                     /locus_tag="VE783_00095"
     CDS             complement(3602..3802)
                     /locus_tag="VE783_00095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011555276.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005829 - cytosol [Evidence IEA];
                     GO_function: GO:0001072 - transcription antitermination
                     factor activity, RNA binding [Evidence IEA];
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cold-shock protein"
                     /protein_id="HYX51821.1"
                     /translation="MEQGTVKWFNDAKGYGFISRQNGEDVFVHFSAIQANGFRSLKEG
                     QAVQFSVVKGPKGWQAENVQLL"
     gene            4011..4388
                     /locus_tag="VE783_00100"
     CDS             4011..4388
                     /locus_tag="VE783_00100"
                     /EC_number="2.7.8.7"
                     /inference="COORDINATES: protein motif:HMM:TIGR00516.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008897 - holo-[acyl-carrier-protein]
                     synthase activity [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="holo-ACP synthase"
                     /protein_id="HYX51822.1"
                     /translation="MIVGTGVDIAEVPRIKAAVERFGQRFLSRVFTPEEARYCLARPN
                     AAERLAARFAAKEAAMKAIGTGLRHGITWRDVEVVRQPGGRPTLRLTGKAAEFADRLG
                     CRNMHLSLTHSADQAMAFVILES"
     gene            4456..6912
                     /locus_tag="VE783_00105"
     CDS             4456..6912
                     /locus_tag="VE783_00105"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX51823.1"
                     /translation="MTRAALDPEIQPEIAQVAPRTVMVAVALVSFASLMLELAMTRLF
                     SVVLFYHFAFFAISVALLGLGSGGVFAHVRQEWLSRFDIGALGTWLCLLNALSIPAVL
                     WVVLHTPVSLQVTGGNFARLTVIYLVTAVPFFFTGILFSVVFARSSSAITVLYGADLG
                     GGASACVAIVPFLNTIGAPSVLLLCSVVMAVAGVFWAGSRKSATLARVVAVVSILFLL
                     WGHAGRRMDVIYAKGILRDPNWIEFAKWNAISRVEVNNQNGSRYVVIDADATTAIMNV
                     DPAKWDQDQPASPAPTHTGIPGQGSFNWKKSLMAAAPAMANVLRPHGSFAIIGPGGGV
                     DVMRAVANGSPSVTGIEINPIIANDVMRGKYAEYSYHLYDLPQVHLHVQDGRSYVRSS
                     NEKYDVVQMTLVDTWASTAAGAFALSENNLYTVEAFREYFDHLKPDGMIAITRWEFHE
                     PREALRVVSQAIEALHQLGVSDPRQHFAIVSDGRLDEDGRPVLVLAKKSPFTLAEHEA
                     IAAHVRANPNLVWLNPPAAFPDLQHLPPAAEAFARLISSNDPVQFALGYAYNVAPVSD
                     NAPFFFFTLKTGYVLKNIAAGTGKGMDWRINLGVVVLGMLLVISLLAVLAFLILPLLI
                     HGLDPGERGAGIPELLYFIAIGFGYILVEISLIQRFVLFLGHPTYALTVVVFLLLLSS
                     GAGSVLARRFVYSNARLVQTLTMIAGLIAINLIMLPSLLSSTIGAPFLAKLVISGTVL
                     VPLGLLMGMPFPTGLKLVDTVEWAWALNAAASVLGSVMAMIIAIHFGLAVTLACAGAG
                     YLLAAACSTIWKYSWGANRA"
     gene            7068..8102
                     /locus_tag="VE783_00110"
     CDS             7068..8102
                     /locus_tag="VE783_00110"
                     /inference="COORDINATES: protein motif:HMM:NF014523.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MlaD family protein"
                     /protein_id="HYX51824.1"
                     /translation="MGITVIVASVILAILVFLMSGTSGMFTSKISLVTYFDNAEGLRS
                     GQPVDLQGVPVGNVTDVRVVTNRPLTPVQVTMKVNRRFAPLIHKDTTAVVRTAGVLGE
                     SFIDLDSKQAKKPPVGDGDELPSFNAPGIEDVVRSSQTTLQNMDVLVKRLDRIVAQVE
                     SGKGSLGQIISDPTLMNKANGILDQLQAMLNDVNKGRGTIGKLFSDDSLYKKANLEID
                     KLDKIIDDLNAGKGTAGKFLKDEALYNNANQTIAKFDQLVTDVNAGKGALGTLTKDEQ
                     FALKLRNTMSKLSDIADRIESGEGSVGQLVKNPSVYNNTDQLLIETRQLMKAVRENPK
                     KYLTIRFRIF"
     gene            8150..10186
                     /locus_tag="VE783_00115"
     CDS             8150..10186
                     /locus_tag="VE783_00115"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: protein motif:HMM:NF017464.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008237 - metallopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M13 family metallopeptidase"
                     /protein_id="HYX51825.1"
                     /translation="MRKFSFLLSALLLMGALAAQQPPAQSSAGQSKAGIESSAIDKTA
                     DPCVDFYQYSCGNWVKNNPIPPDQASWGRFNELAERNREVLHQILEQAAKATKRDANE
                     QKIGDYYSSCMDEADVNRKGVAVLKPDFDRIGALNDKAQLPALLAHLQGEGIDSFFGF
                     YSAPDFKNAKEVIAQADQGGLSLPDRDYYLKDDPKSVELRKAYVQHVTNMFKLLGDAP
                     DKAAAEANVVMQIETALAKGAMDRVERRDPEKIYHKLSQKEWAALAPSLDWNRFTTDI
                     GAPQFASLNVANPEFFKALDAELKPLSVPDIKTYLRWHLVHSQADQLPTPFVNENFEF
                     FRKTLFGAKQIQPRWKRCTAAADRDLGEALGKAFVDKAFPPDAKARTLAMVKQLEEAL
                     KSDIQGLDWMTDATKKQALVKLEAIQNKIGYPSKWRDYSSLKIVRGDNLGNSLRANEF
                     EVHRQLAKIGKPLDKQEWQMTPPTVNAYYDSSENDINFPAGILQRPFYDFKADDAVNY
                     GGIGAVIGHELTHGFDDEGRQFDADGNLKDWWTPEDAKAFEQRAQCIVDEYDSFVAVD
                     DVHVRGKLTLGENTADNGGLRIAHMALQSSLGGKPGEKLEGYTPEQRLFLGWGQIWCQ
                     NQSEPFARLMAQVNEHSPGKYRVNGVVQNMPEFQKAWGCKAGQPMVRQNACHVW"
     gene            10337..10430
                     /locus_tag="VE783_00120"
     tRNA            10337..10430
                     /locus_tag="VE783_00120"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:10371..10373,aa:Ser,seq:gct)
     gene            10592..10981
                     /locus_tag="VE783_00125"
     CDS             10592..10981
                     /locus_tag="VE783_00125"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX51826.1"
                     /translation="MDVDGAPPISLVPISCAIRWRTGTRPWESVGNDLDEAIAARERK
                     QAYFEALNANVPVVQNEDDAARTKITDAVYQWFSELQLFQGKDQQGKSEKRCGRTTTA
                     LDSSSISRRRKICVSWIRSIASNFCVT"
     gene            10978..11703
                     /locus_tag="VE783_00130"
     CDS             10978..11703
                     /locus_tag="VE783_00130"
                     /inference="COORDINATES: protein motif:HMM:NF012798.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific integrase"
                     /protein_id="HYX51827.1"
                     /translation="MKFLRDHESDLDDRTVHNVFETLNTFLRTREMFIAGKILAELDY
                     AEKPPKPYTKQELKDLFAAMDEEEKLLYGLFLNSGMRDAEMQNTEYADFNWEKGTLHV
                     QPKPWRKFRLKGKSRKKSAKDRFIPLPAKLVWKFKDRMRQRNAPPHDLVFPNGEGKPD
                     GHFLRKLKAIAKKAGVEDAELHRFRKTYADTLHEEGVSVNTIRIRLGHESLDVTLAYL
                     KGKDAESEEAQEHANSSSLALYA"
     gene            complement(11845..12264)
                     /locus_tag="VE783_00135"
     CDS             complement(11845..12264)
                     /locus_tag="VE783_00135"
                     /inference="COORDINATES: protein motif:HMM:NF024092.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HYX51828.1"
                     /translation="MNDQQKREQNSGVRDQEIRAALDQHWAASDANDFETEHRIYHED
                     AVLEYPQSGERTRGRHNIQNQRASQPSKKRFAIRRVIGGGDLWITEFILTYDGKPSYT
                     VSIMEFRDDKVARETQYFADPFVAPAWRAQWVERMDV"
     gene            complement(12372..13280)
                     /locus_tag="VE783_00140"
     CDS             complement(12372..13280)
                     /locus_tag="VE783_00140"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024989.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-dependent oxidoreductase"
                     /protein_id="HYX51829.1"
                     /translation="MKAARIHQFGAPEVVVIDDLSRPNPDKGEILVGVKAAGVGPWDA
                     LIREGKSKVSPRPPLTLGSDLSGVVETIGPGVADFRVGDEVYGVTNAHFCGAHAEFAL
                     ASAGMVARKPRRLNHVEAASVPVVAVTAWQMLFEYAKVVAGQSVLILGAGGNVGAYAV
                     QLAASTGLDIVAIVGPKDVELVRNLGAKTVLVDQKAIPQVDVVIDTVGGETLEHSFGK
                     VKSGGVLVSVVSTKPLPQRPGVRSVFFYADVTTLRLNVLTKLFEEEKLSARVGSILPL
                     QDARTAHYMLGGAPHKPGKIVLEMAA"
BASE COUNT         2848 a         3914 c         3740 g         2834 t
ORIGIN      
        1 ccctgatccg caagtccaga agacgctcca agccatgctc agcagcaacg aatccgtgct
       61 cgcactgaca attctggttc tgctgttcat gctggtgatc tggatcatcg tcggcagcgt
      121 tgccggcgct tccaccgtcg cgctctccaa acagaagccc cggctttaga tttggcttag
      181 ccgtcgccat cggatatcat gcgtgagact tatgactgct ggaacctcct cgcgtctgcc
      241 caacctgagg gaaaaaggcc ggatcatgtc cgcctcagaa gttgaacgga ccctcattcg
      301 cctcgcccat gaaatcgtgg aaaaaaacaa cggcgtggag aacctcacgc tggtcggcat
      361 caagcgccgc ggcgtgccgc tggccaatcg cctttccaag ctgatccagc aggtggagaa
      421 gcagccgctc gaggtgggga ctctcgatat cacactctac cgcgacgatc tctccactgt
      481 gggcgccacg cccatgattg agcgggccac gccgctaggg gtggaaatcg tgggccgcaa
      541 cgtgatcctg gtggatgacg tcctttacac cggtcgcacc atccgcgccg ccatggatgc
      601 ccttttcgat cacggccgtc ctcgccgggt acagctttgc gtgctgattg atcgtggaca
      661 tcgcgagctg ccaatcgaag ccgcttttgt cgggcgccga gtacagacta ctgacatgga
      721 aatcattgaa gttcgcctca gcgagatcga caatgaagaa caggtgatga tggtggagcg
      781 cacggcataa gcgcatggcg cggacgcgat cccttctcgg actggaaaac ctcaacgctg
      841 accaaatttc ttttcttctg aaacttgccc ggaaaatgca gtcgcgaccg ccccggccgc
      901 tgctgcgcgg gaagcgtatc gctcttctct tctatgaatc ctctacccgc acccgcgttt
      961 cgttcgagtt tgctgccaag ctgctgggca cgcatacctc catcatcaat gccaccgcat
     1021 cgagcattga aaaaggcgag tccctggtgg acaccggcaa gactcttcaa gcgctggggg
     1081 cagattgcat cgtgatgcgg catcccgcgt ccggcgcgcc gaatgtcctc gcgcgcaacc
     1141 tgcatgtgcc catcgtcaat gcgggtgacg gcatgcatga gcatccatcg caggctctac
     1201 tcgatgctta caccatcctg aagcatagaa ggacgctgaa gggtcttcgc gtcaccatgg
     1261 tcggcgatat ccagcactcg cgcgtggttc gctccaacgt tcatctgttg agtaagttcg
     1321 gcgctcaggt cacgctctgc ggtccgccgg agcttctccc tgaaaacgct gccactcttg
     1381 cgtccaatat caaaataagc cggcacatcg atgaagccgt ccgcaaagcc gacgtagtaa
     1441 tgatgctgcg cgtgcagaaa gaacgcctgg ccggtcttcg gctcgatgtg gaaaagtaca
     1501 ttgcccattt ccagctcacc accgaacggc tgaagctggc tcagaaagac gcgctggtca
     1561 tgcatcccgg ccccatgatc cgcagcatgg aaatccagag cgaagtcgcc gacggccccc
     1621 aggcagtaat tgaagaacag gtccataacg gcgtgtatgt gaggatggcg atcctggcga
     1681 cgtgcatggg ggtggcatga tgttttttta tcccgacagt ttgcaaagca aactggaggg
     1741 aaccctacct tctcaagaga tttcaggctc tcgcgtcgtc ggactcgaag cgggtaggga
     1801 ttcctcgctg cgctcggaac ttcggctagc agtctctgcg gcgaaagggt tttcctgatg
     1861 gcctttaaga cgctgtccat ccgcggcggc accctcatcg atccctccca gcatcttgag
     1921 ggcaaatacg acctgctgct caaagacggt cgggtcgccg aagtcgccgc tcccggcaag
     1981 ctcaagggca aagccgatga atccatcgat gcgcgcgggt tggtcgtctg cccgggactc
     2041 attgatattc atgtccacct gcgcgaacca ggccagtcac acaaagaaac tatcgcgacc
     2101 ggtactttgg ccgcagccgc gggaggcttc acctctgttt gctgtatgcc gaacaccaat
     2161 cccatcaatg acaatccagc catcacccgc tggatgcttg atcctgaacg cggagctcac
     2221 gtcaacgtct ttcccatcgg tgcggcgacg ctcggcagca agggcgagca acttaccgat
     2281 ttttccatgc tcaagcgcgc cggggcggtg gccgtaactg acgatggaaa gcccatcctg
     2341 catgacgccg tcatgcgtca ggcgctgctc ggcgcaggga ggctcggaat tcccgtgatc
     2401 cagcatgcgg aagacaccac catgaccgca ggctccatga tgaatgcggg acctacggct
     2461 ttccggcttg gtttgcgcgg ctggccggcc gaagcagaaa gcaatctggt tgagcgcgat
     2521 atccgtctcg ccgctgagac tcgcggacac tatcacgtgg cgcacctcag cactgctgcc
     2581 gcgctcaaag ctgttcgcaa agccaagcgc gacaagctga acgtcacctg cgaagtcacg
     2641 ccgcaccatt tcgtgctgct cgatgaagac gttggcgact accagaccaa cttcaagatg
     2701 aatccgcccc tgcgctcacg tgctgacctc gaagcccttc tcgctgggct tgccgatggc
     2761 gccatagatt gcatcgccac cgatcacgct ccgcacgcgg ccaacgaaaa gaaccaggag
     2821 ttcgactatg ctcccttcgg catcaccggc cttgagacgg cggtaggctt gagcatcagc
     2881 gtgctgcacg cccgcaacaa aatcccgctg tcgcgaatca tcgagctgct ttccaccaac
     2941 cccgcgcggg tgatgggact ggaaggccga gggacactga aagtcggctc acatgccgac
     3001 ctgacgattt tcgatccggc aaagaagtgg gcctacgtgg ctgcagaatc gaagtccaag
     3061 tcaaagaact cgccgttcga tggctggaag atgcaggggc gggtggcggc gaccgtggtc
     3121 ggcgggagcg tgaagtatcg agcttagatg ctgtgctgtt tgctgcaatc ccgagcgaag
     3181 ctcgggatcc ctatggactg ccatgaaccg aggggacaag attcgaaccg tcaagaataa
     3241 acatcgccag ggcggcaatg attgcatgct ccttggccat cgctatggcc gggtcgagtc
     3301 atgccgccgc aaaaagcaag caatccagaa tcaccacaac gcattctccc gagccgcgtc
     3361 ggtataccgc ggcagagctt tacggtcaag ccgacgtcgt agctcgcgtg caagtgattt
     3421 cgggtgacac ggaacagtac gacaagacaa agtcaacgtg ggtttcaagg gcgctacgca
     3481 aaataacggt tttttgcggc aaaaaggctt ctttttcgca aaaaactaag gcggccgtct
     3541 tgtggccgcc tcgtatcaac ttttggaacc ggtctttgtc tagagttcta gagcaactgt
     3601 tctacagcaa ctgcacgttc tctgcttgcc agcctttggg gcctttgacg acactgaact
     3661 ggacggcctg accttccttc aggctgcgga agccgttagc ctgaattgcg gagaagtgaa
     3721 caaaaacatc ttcgccgttc tggcgggaga taaagccata gccctttgcg tcattgaacc
     3781 acttaactgt tccttgttcc atggtgttgc acgcattcct tgtatctgag atttgcgctt
     3841 tttctgcagc tagttccagg caggatgcag gggtgcagta ctgctgtaca accgctctcg
     3901 aaacaacgcg ggggacatta tacctttggg gttcagagtt gtcgcttaag aaatcgtttg
     3961 caattccacc cctctggaac accggctgtg gtaacgtaca acagagccaa atgattgtag
     4021 gcacaggagt tgacattgct gaggtgcccc ggatcaaggc cgctgtggag cgctttggtc
     4081 agcgcttcct ttctagggtt ttcaccccag aggaggcccg ctactgcctt gcgcggccga
     4141 acgcggcgga acggctcgct gcgcgatttg ccgcaaaaga ggcagctatg aaggcgattg
     4201 gaaccgggct tcgacatggc atcacgtggc gcgatgtgga agtcgtgcgc cagccgggtg
     4261 gccgtcccac gctgcgactg accggtaagg cagccgagtt cgctgaccgt ttgggctgcc
     4321 gcaatatgca tctttctttg acccattcgg ccgaccaggc gatggccttc gtgattcttg
     4381 agagctaatc cacgttcctg cgccgtagta aactttccaa gctcgtagca gccattcagg
     4441 agcttccctc acgccgtgac ccgtgccgct ttagaccccg aaatccagcc ggaaattgcc
     4501 caagttgctc cgcgcacagt catggtggct gttgccctgg tcagctttgc cagcctcatg
     4561 ctggagctcg ccatgacgcg gctgttcagc gtggtgctct tctaccactt tgcctttttc
     4621 gccatctcgg ttgcgctgct ggggctgggt tcaggcggcg tttttgccca tgtacggcag
     4681 gagtggctta gccggttcga tattggagcc ctgggaacct ggctttgcct gctcaacgct
     4741 ctttccatcc cggcggttct gtgggtggtg ctgcatacgc cggtttcttt acaggtgacg
     4801 ggcgggaact ttgcccggct cacggtgatt tatctggtca cagcggttcc gttcttcttt
     4861 accggaatcc tgttctcggt tgtctttgcc cgctccagca gcgctattac ggtactttat
     4921 ggcgcggacc tggggggcgg cgcctcggct tgcgttgcca ttgtgccctt tttaaatacc
     4981 atcggggccc cctcggtcct gctgctttgc tcggtggtaa tggccgtggc cggggtgttc
     5041 tgggccggtt cgcggaagag tgccaccctt gcgcgcgtgg tcgcggtggt gtcgattctg
     5101 ttcctgctat gggggcatgc cggccggcga atggacgtga tctatgcgaa gggtatcctg
     5161 cgcgatccga actggatcga gtttgccaag tggaatgcga tctctcgcgt ggaggtgaac
     5221 aatcagaacg gctcgcgtta tgtggtgatt gacgcggacg ccaccacggc catcatgaac
     5281 gtggatcctg ccaagtggga ccaggaccag cccgccagcc cagctcccac gcacaccggt
     5341 atccctggtc agggaagctt caactggaaa aagagcttga tggcggccgc cccggccatg
     5401 gccaacgtgc ttcggccgca cggcagcttt gccataatcg gacccggtgg cggtgtggac
     5461 gtgatgcgcg cggtggcaaa cggcagcccg tcagtcactg gcattgagat caacccgatc
     5521 attgccaatg acgtgatgcg cgggaaatac gccgaatact cctaccatct ttacgatctg
     5581 ccgcaggtcc atctgcacgt acaggacggc cggtcatacg tacgcagctc gaatgagaaa
     5641 tacgacgtcg tccagatgac gctggtggat acgtgggcct ccaccgcagc cggcgcgttt
     5701 gcgctgagtg agaacaacct gtacaccgtg gaagcatttc gggaatattt cgatcacctg
     5761 aagcctgacg gcatgatcgc cattacgcgc tgggaattcc acgaaccgcg cgaagcgttg
     5821 cgcgtggtct cgcaggcgat tgaggcgctg catcaactcg gggtatcgga cccgcgccag
     5881 catttcgcga tcgtttccga cgggcgtctg gatgaggacg gccgtcccgt tttggtgctg
     5941 gccaagaagt cgccatttac tctggctgag catgaggcca tcgcagccca tgttcgcgcc
     6001 aatccaaatc tggtatggct gaatcctccg gctgcatttc ctgacctgca acacttgccg
     6061 cctgcggccg aagcctttgc ccggctgata agctccaatg atcctgtgca gtttgccctt
     6121 ggttatgcct ataacgttgc gccagtgagc gacaatgcgc ctttcttctt cttcaccctg
     6181 aagaccggct atgtgctcaa gaacattgct gccggtacgg gaaaagggat ggactggcgg
     6241 atcaacctgg gcgtggtggt tctgggaatg ctgctggtaa tttcactcct cgcggtgctc
     6301 gccttcctga tcctcccgtt attgatccac ggcctcgacc cgggagaacg cggcgcgggt
     6361 attcccgaac tcctgtactt tattgctatc gggtttggct acattctggt ggaaatttcc
     6421 ctcatccagc gattcgtact cttccttggt cacccgacgt atgcgctcac ggtagtggtc
     6481 ttcctgctgc ttctctccag cggagccggc agcgtcctgg cccgtcggtt tgtttacagc
     6541 aacgcccggt tggtccagac gctcaccatg atcgccggcc tgattgcgat taatctcatc
     6601 atgctaccct cactgctttc gtccaccatt ggtgcgcctt tcctggccaa gctggtgatc
     6661 agcggtacgg tgctggttcc gctcggactc ctgatgggca tgccatttcc taccggtctg
     6721 aaactcgtgg ataccgtgga atgggcctgg gcgctgaatg ccgctgccag cgtgcttggc
     6781 tcagtgatgg ccatgattat cgcaatacat ttcgggctgg cggttaccct ggcgtgcgcg
     6841 ggcgcaggct atcttcttgc ggctgcatgt tccacaatat ggaaatattc atggggagca
     6901 aaccgggctt gagcatcgtc taaacaaatg gcgtcttttg gcggcccccc cgccgcacct
     6961 gcagaaagaa gcgtgatgca gcgttcgcgt gcctttctgt tatgattttt tcttaggact
     7021 acactcactt gccgagccaa aagcaactca ggtggtctga actgcgagtg gggattaccg
     7081 tgattgtggc ctcggtgatc cttgctatcc tggtcttcct catgagcggg accagcggca
     7141 tgtttacctc aaaaatcagc ctggtcacct actttgacaa cgcagaaggc ctgcgttccg
     7201 gccagcccgt ggacctgcag ggcgttcccg tcggaaatgt gacggatgtg cgagtcgtca
     7261 ccaatcgtcc gctcacccct gtacaagtca ccatgaaagt gaaccggcgc ttcgcgcctc
     7321 tcatccataa agacaccact gcggtagttc gtacggcggg cgtgctcgga gaatccttca
     7381 tcgatctcga cagcaagcag gcaaaaaagc cgccggtggg ggacggagat gagctgccat
     7441 cattcaacgc cccgggcatt gaagacgtgg tccgcagcag ccagaccacg ctccagaaca
     7501 tggacgttct ggtcaaacgg ctggatcgca ttgttgcgca ggttgaatcc ggcaaaggct
     7561 ctctgggcca gatcatcagc gaccccacgc tcatgaacaa ggccaatggg atcctcgatc
     7621 agcttcaggc gatgctgaat gacgtgaata aaggccgggg aaccattggg aagctgttct
     7681 ctgatgactc tctttacaag aaagcgaatc ttgaaatcga caagctcgac aaaatcatcg
     7741 acgacctgaa cgcgggcaag ggaaccgcgg gcaagttcct caaggacgag gcgctgtaca
     7801 acaacgccaa ccagaccatc gccaaattcg accagttggt tacagacgtg aacgcgggga
     7861 aaggcgcgct gggaacactg accaaggatg agcaattcgc gctcaagctg cgcaacacca
     7921 tgagcaaact ttccgatatc gccgaccgga ttgaatccgg tgagggcagc gttgggcagc
     7981 tggtgaaaaa tccgtccgtc tataacaaca ccgaccagtt gttgatcgaa acccggcagt
     8041 tgatgaaagc cgtccgggaa aatccaaaga agtatctgac catccgcttc cgcatcttct
     8101 gatactggcg ccgcggcagc atctaatctt ctcctgaagg gacaactaca tgcgcaaatt
     8161 ttctttcctg ctttctgctc tcctgctgat gggcgcactt gctgcgcagc aaccgccggc
     8221 gcagagctcg gccggacagt cgaaagccgg tattgagtcc agtgccatcg acaagaccgc
     8281 cgatccatgc gtggattttt accagtactc ctgcggaaac tgggtaaaga acaatcccat
     8341 tcctccagac caggcttcct ggggccgctt caacgagctg gcggagcgga accgcgaagt
     8401 gcttcaccag atactggaac aggctgcgaa ggcgaccaag cgcgacgcca atgaacagaa
     8461 gatcggcgac tattactcga gttgtatgga tgaagcagat gtcaaccgta aaggcgtcgc
     8521 cgtattgaag cccgatttcg accgcattgg ggccctgaac gataaagcac agctgccggc
     8581 gctgctggcg cacctgcagg gggaaggaat cgacagcttc tttggctttt actccgcgcc
     8641 ggatttcaag aacgcaaaag aggtgattgc ccaggcagat cagggcgggc tctctttgcc
     8701 ggaccgtgat tactacctga aagatgatcc caagtcggtt gagctgcgca aagcctacgt
     8761 tcagcacgta accaacatgt tcaaactgct gggcgatgct ccggacaagg cagccgccga
     8821 agccaacgtg gttatgcaga ttgagactgc gctggccaaa ggcgccatgg accgcgtgga
     8881 gcgccgcgat ccggagaaga tttaccacaa gctctctcaa aaagaatggg cggcattggc
     8941 gccttcgctg gactggaacc ggtttaccac tgacattgga gcaccgcaat ttgcttcgct
     9001 caacgtcgcc aacccggagt tttttaaagc tctggacgcc gaactcaagc cactcagcgt
     9061 tcctgacatc aagacttacc ttcgctggca cctggtgcac agccaggctg accagttgcc
     9121 cacgccattt gtgaacgaga actttgagtt cttccgcaag accctgtttg gcgcaaaaca
     9181 gatccagccg cgctggaagc gttgcaccgc cgcggcggac cgcgatctgg gagaagccct
     9241 gggcaaagct tttgtggaca aggccttccc gccggacgcc aaggcgcgca ccctcgccat
     9301 ggtgaagcaa ctggaagaag cgctgaaatc cgacattcaa gggctcgact ggatgaccga
     9361 tgccaccaaa aagcaggcgc tcgtgaagtt ggaagccatc cagaacaaga tcgggtatcc
     9421 gagcaagtgg cgcgactaca gttcgttgaa gatcgtacgc ggcgataatc ttggcaactc
     9481 actccgcgcg aatgaatttg aggtgcatcg ccagttggcc aagatcggca agccgctgga
     9541 caagcaggag tggcagatga cgccaccgac cgtgaacgcg tactacgatt ccagcgagaa
     9601 cgatatcaac ttccccgccg gaatcctgca acggcctttc tacgatttca aggccgatga
     9661 tgcggtgaac tacggaggca ttggcgcggt gattggccac gaactgaccc acgggtttga
     9721 cgatgaaggc cgccagttcg acgctgatgg caacctcaaa gactggtgga ctccggaaga
     9781 cgccaaggcc tttgaacagc gcgcacagtg catcgtggac gagtacgaca gctttgtggc
     9841 ggtggatgac gttcacgttc ggggcaagct gacgctgggt gaaaacacgg ccgacaacgg
     9901 cggcctgcgc atcgcccata tggcgctgca gtcatctctg ggcggcaagc ccggggagaa
     9961 gctggaaggc tacacgccgg agcagcggtt gtttctgggc tggggccaga tctggtgcca
    10021 gaaccagtct gaaccgttcg ctcgtctcat ggcccaggtc aacgagcact cgcccggcaa
    10081 ataccgcgtg aacggcgtgg tccagaacat gccggagttc cagaaagcct ggggatgcaa
    10141 ggccggccag cccatggtgc ggcagaacgc ctgccacgtg tggtaggaga tacatacaac
    10201 gttattccag cagcccggct ccaatgagag ccgggctttt ttgcgcgtct tagtgtcgca
    10261 tcaatgaatc tttccatgtc cgggtgcgcg ggctgaagtt cctatataat cgactctgcc
    10321 gcacacgttg tacgccggag aggtggccga gtggctgaag gcggcggttt gctaaaccgt
    10381 tataggggct aacacctcta tcgggggttc gaatcccccc ctctccgcca gacctttagt
    10441 ttctgctact tacagtacgt gactaccaac tgactaccaa attcccatca tttagcttcc
    10501 ggcgcggtat taagcactgc aggcaagatg gcagtcacac tctatcggca ggtcggcaaa
    10561 ggtaaagccc gccgctatca gaagatcaac cttggacgtg gacggcgccc cgccgatctc
    10621 actggtccct atttcctgcg ctattcgctg gcggaccggc acacgtcctt gggaatcggt
    10681 tggcaacgac cttgatgaag cgatcgccgc ccgagagcgc aagcaggcat atttcgaagc
    10741 tctcaatgca aacgtcccgg tcgttcagaa tgaagacgac gcagcccgga cgaaaatcac
    10801 ggatgctgtc taccagtggt tctccgagct tcaactgttt cagggcaaag accagcaagg
    10861 taaaagcgag aaacgctgcg ggcgtacaac taccgccttg gattcttcct cgatttcacg
    10921 gcgcaggaag atctgcgttt cctggatcag atcgatcgca agcaacttct gcgttacgtg
    10981 aagttcctgc gagaccatga gagcgaccta gacgatcgca cagttcacaa cgtcttcgaa
    11041 accctgaaca cattcctgcg tacacgggaa atgttcatcg ctgggaagat tcttgcggaa
    11101 ctcgactacg ccgagaagcc gccgaagccc tatacgaaac aagaactcaa agacttgttt
    11161 gcggccatgg acgaggaaga gaaactgctc tacggtctgt tcctgaattc cggcatgcgt
    11221 gatgccgaaa tgcagaatac cgagtacgct gacttcaact gggaaaaagg aacgcttcac
    11281 gttcagccga aaccttggcg caagttccgg ctcaaaggca agagcaggaa gaaatccgct
    11341 aaggacagat tcattccgct cccggcaaag ctcgtttgga aattcaagga cagaatgaga
    11401 cagcggaatg ccccgccgca cgacctggtt tttccaaacg gcgaaggcaa acctgacgga
    11461 cacttcttgc gcaagctcaa agcaattgcg aagaaagctg gcgttgagga cgcagagctg
    11521 caccgctttc gcaaaactta cgccgacact ctgcatgaag aaggtgtttc agtgaacacc
    11581 attcgaatcc gcctcggcca cgagtccctg gacgtgacgc tcgcctacct caaagggaag
    11641 gatgccgagt cggaagaagc tcaagagcac gctaacagca gcagtctggc gctctacgct
    11701 taggttcgga acataagtgc gggagatttc tggctcatga gctgagatct cccctggtcg
    11761 ttctgggcag aaggattccg aaccccggcg atgttaatgg cgcgtatgga atccgccggc
    11821 catcatcggt ctcgatggtc gagattatac gtccatccgt tcgacccatt gagcgcgcca
    11881 tgcgggggcc acgaatggat cggcaaagta ctgtgtttcc cgcgcaacct tgtcgtccct
    11941 gaactccatg atgctcacgg tgtaggatgg cttgccgtca tatgtcagga tgaattcggt
    12001 gatccaaaga tcaccgccac caatgactcg tcggatagca aaccgctttt tgctcggctg
    12061 actagcgcgt tgattctgta tgttgtgtcg accgcgggtt cgctcgcctg actgcgggta
    12121 ttccagcacc gcgtcctcgt ggtagatgcg gtgctccgtt tcaaaatcat tggcatcgga
    12181 tgccgcccaa tgctgatcca atgccgcacg gatttcttga tctcgcactc cagaattctg
    12241 ttccctcttt tgttgatcgt tcattttgag cctgcaattt caacgccgct ggatcgatta
    12301 ggttctgcgc cgatcgaggt tcctccctcg ctgcacatcg cgggggcgta ccggtactcc
    12361 ggcatcgcca gttaagctgc catctccaga acgattttgc cgggcttatg cggcgcccct
    12421 cccaacatgt aatgcgcagt ccgcgcatcc tgcaacggca ggatggagcc cacacgcgct
    12481 gagagctttt cctcttcgaa tagcttcgtg aggacgttca gacgcaacgt ggttacgtct
    12541 gcgtagaaga atacggaccg gacgcctggg cgttgcggca agggcttggt ggaaactaca
    12601 gataccagga caccgccgga tttcactttt ccaaatgagt gctccagtgt ctctcccccc
    12661 actgtgtcaa taacgacgtc cacctgcgga atcgcttttt gatcgaccag cactgttttc
    12721 gccccaagat tccgcaccaa ctcgacatct ttcggtccta cgatcgccac gatatctagc
    12781 cctgtgctgg cggccaactg aacggcgtac gcgcccacat tgccacctgc gccgaggatc
    12841 aacacggact gaccggcgac aaccttcgcg tactcaaaaa gcatttgcca ggcagtaacc
    12901 gccacgaccg gcacagacgc tgcttcgaca tggtttaatc gccgtggctt tctggccacc
    12961 attccggcag aagcgagtgc gaactccgcg tgcgctccac agaaatgcgc attcgtcacc
    13021 ccgtacactt cgtcaccaac acggaaatcc gcaacccctg gtcctattgt ctccacgact
    13081 cctgaaagat ccgagcctaa cgtaagcggg ggtcgcggac tcaccttact cttgccttcg
    13141 cgaatgagtg cgtcccatgg ccccacgcca gcggctttca ctccgaccag gatctctcct
    13201 ttgtctggat tcggccgtga caggtcgtcg ataaccacca cttctggcgc accaaactga
    13261 tgaattcgtg ccgctttcat gcttcctctt gatctggcga aagtgccaga tcattcttga
    13321 gcgcccctcc gttcct
//
LOCUS       DASQYP010000006         2612 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_169621, whole genome shotgun sequence.
ACCESSION   DASQYP010000006 DASQYP010000000
VERSION     DASQYP010000006.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 2612)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2612)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2612
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_169621"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(113..>2612)
                     /locus_tag="VE783_00145"
     CDS             complement(113..>2612)
                     /locus_tag="VE783_00145"
                     /inference="COORDINATES: protein motif:HMM:NF042649.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HYX51830.1"
                     /translation="PGMLYGKILHSPVPHAIIKKIDASRAEALDGVVCVVTGPDAPNK
                     YGILPVGHDETALAVEKVRYVGDNVACVVATSEALAEQALELVDVEYEPLPAWFDPED
                     SMKAERDWIHPQRPNNIEKDYHHVFGDPDKGFTESDAVIEHRYIAAEVTHAAMEPHST
                     LASFEIDSQSGKQGRLTVWSSTQVPYYLQHKLSIVLDMPMSQIRVVKPLVGGGFGGKS
                     EVIPLEIIAAVAARKAKAPVKITYTREEVFWAHRGRPRTIIDMKVGAKKDGRLTAVAV
                     RVVQDGGAYCSYGVVTILYSGALLGALYDIPNIRYDGYRVLTNKPACGAMRGHGTVNV
                     RFAFESSLDEIAAKLGVDAAEIRRRNLLKPPCITVNNLRVQSYGLPECIDKVVERSGW
                     KQRKGRLALKRGLGIACSHYVSGAANSIIRSDMPHSTVNIKIDRDGGVVVYTGASDIG
                     QGSDTMVAQIVAEVLGIGLARIKVVAADTDLTPIDIGSYSSRVTFMNGNASLRAAQDV
                     KKKIAGAAAAKMNCAPEDLIMRDDRVWKRGTAEPKQMGAQAEKILDKVDTPRGNVQEV
                     SGRVEGQTLRGSLQQKRKEEGPKDHMSFEEAVVSAIDFSGALTGTGSYAPPKEARGGT
                     FKGAGVGPSPAYSYSAQVAEVTVDTDTGEVTVHKVWAAHDCGRALNPVSVEGQVIGSV
                     WMGLGQALQEEMVWKDGLLMNPGMLEYKSPSAVESPEIEPIIVESVDPEGPFGAKEAS
                     EGSLAATIPAIGNAIYDAVGIRLREAPFTPERVLAALKQKKLEAKALEITRGADPTAP
                     KSFREHGGSTWYKGKGPQRHEQDPARRSTVPEEA"
BASE COUNT          487 a          859 c          673 g          593 t
ORIGIN      
        1 tgaatgacgg taagctcatt gcaaattggt aaattcgtaa tttggtaagt gggtaatttc
       61 aaagtcttcg atcggcatcg gcagtcacca acttacccaa ttgccaagtt tcttatgcct
      121 cttcgggaac cgtagacctt cttgccgggt cctgctcatg ccgctgcggg cctttgccct
      181 tgtaccacgt cgatccgccg tgctcacgga agctcttggg cgcggtcgga tcagcgccgc
      241 gtgtgatctc cagcgctttg gcctcaagct tcttctgctt cagtgctgcc aggactcgct
      301 ccggagtgaa tggcgcttcg cgcaatcgaa tcccaactgc gtcgtaaatt gcattgccga
      361 tcgcgggaat tgtcgccgcc agagatcctt cgcttgcttc ctttgcgccg aagggccctt
      421 cgggatcgac cgattccaca atgatgggct cgatctccgg cgattccacc gcggaaggcg
      481 acttgtactc cagcatgcca ggattcatga gtaggccgtc tttccacacc atctcttcct
      541 gcaaagcctg tccaagcccc atccacactg acccaatcac ctggccttcc acggaaaccg
      601 gattcagagc gcgaccgcag tcatgtgcag cccagacctt gtggaccgta acttcgcccg
      661 tgtcagtgtc caccgtgacc tcggccacct gcgcggaata cgaatacgcc ggcgaaggtc
      721 ctacgccagc gcctttaaac gtgccgccac gagcttcttt gggcggagca taagagccgg
      781 tacccgtgag cgcgccgctg aagtcgatgg ccgataccac cgcctcttca aagctcatgt
      841 ggtctttggg accttcttcc ttgcgcttct gctgcagcga tccgcgcaac gtctggccct
      901 ccactcgtcc gctgacttcc tgcacgttgc cccggggcgt atcaaccttg tccaagattt
      961 tttcggcttg tgcacccatc tgttttggct cagcggtgcc gcgcttccac acgcgatcat
     1021 cgcgcatgat cagatcttcc ggcgcgcaat tcatctttgc cgccgcagcg cctgcgatct
     1081 tctttttcac gtcttgcgcc gcccgcaggc tggcgttgcc attcatgaag gtcacgcggc
     1141 tggagtatga cccgatatcg atgggcgtca ggtccgtatc ggctgccaca accttgatcc
     1201 tcgccagccc gattcccaga acttccgcca cgatctgcgc caccatggtg tcggatccct
     1261 ggccaatgtc agaggctccg gtgtacacca ccacgccgcc atcgcgatca atcttgatgt
     1321 ttaccgtgga gtgcggcatg tcggagcgga tgatgctgtt ggcggccccg ctcacgtaat
     1381 gactgcaggc gattccgagc ccccgcttca gcgccagcct gcctttacgc tgcttccaac
     1441 cggatcgctc caccacctta tctatgcatt ccggcaggcc gtagctctgc acgcgcaagt
     1501 tattcaccgt gatgcacggc ggcttgagca gattgcggcg tcgaatctct gccgcgtcca
     1561 cgcccagctt cgccgcaatc tcatccagcg aagactcaaa agcaaatcgt acgttcaccg
     1621 tgccgtggcc gcgcattgcg ccgcaggccg gcttgttggt cagcacgcga tagccgtcat
     1681 accggatatt cgggatgtca tagagcgcgc ccagcagagc acccgaatag aggattgtta
     1741 ccacgccgta ggagcagtac gcgcctccgt cctgcaccac ccgcaccgcc accgccgtaa
     1801 gccggccatc ttttttcgcg ccgactttca tgtcaatgat ggttcgcggc cgtccgcgat
     1861 gtgcccagaa aacttcctcg cgcgtgtagg tgatcttcac cggcgccttc gccttgcgcg
     1921 cggccacagc ggcaatgatc tccagcggta tcacttcact ctttccgcca aagccaccgc
     1981 ccaccagcgg tttcaccacg cgaatctgcg acatgggcat atcaagcaca atcgaaagct
     2041 tgtgctggag ataatatggc acctgcgtgg atgaccagac tgtcagccgc ccctgcttac
     2101 cgctctgaga atcgatctca aaagaagcca gcgtcgaatg tggttccatc gccgcatgag
     2161 tcacttcggc ggcgatgtat cggtgctcaa tcacggcatc ggattcagta aaacctttgt
     2221 ctggatcgcc aaaaacgtgg tggtaatctt tttcaatgtt gttgggccgc tgcggatgga
     2281 tccagtccct ttccgctttc atggaatctt caggatcgaa ccatgccgga agcggctcgt
     2341 actccacatc aaccagttcc agcgcctgct ccgcgagtgc ttctgaagtg gccactacgc
     2401 aggctacgtt atcgcccacg tagcgcacct tctccaccgc cagtgccgtc tcatcatgcc
     2461 ccaccggcag aatgccgtac ttgttcggcg catccgggcc tgtgaccacg cataccactc
     2521 catccagcgc ctcagcccgc gatgcatcaa tcttctttat gattgcgtgc ggtacaggcg
     2581 agtgcagaat cttgccgtaa agcattccgg gc
//
LOCUS       DASQYP010000007         4710 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_296484, whole genome shotgun sequence.
ACCESSION   DASQYP010000007 DASQYP010000000
VERSION     DASQYP010000007.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 4710)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4710)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4710
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_296484"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            302..1264
                     /locus_tag="VE783_00150"
     CDS             302..1264
                     /locus_tag="VE783_00150"
                     /inference="COORDINATES: protein motif:HMM:NF037417.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX51831.1"
                     /translation="MAQIKKMSAEQMQTMIQECAGKLGRTPTMKELLKMTGYRISKTL
                     VARRFGSYLMALKACGLQSEWRNSTVTDVELFLSWAAAARELGALPTVMQYQALRNRS
                     QRPILKLVKKWADVPNKMMAIMQEQNLAAEWEDVARMIEQRELEKPEAAGQRARRAAR
                     ADGSSGEERTPRDTRVANAGAAGAEVMPEVRPAGEMRCDPWREALVEPPELIDGQPVF
                     GDPIGHPAMAFAPTNEATLAILFGAMAVQLGFVILRAQQPCPDVLALRKMKGGWQLQK
                     IELEIESINFLRHMHDKRDADLIVCWKHNWKDCPVPVLELSQFF"
     gene            1844..2446
                     /locus_tag="VE783_00155"
     CDS             1844..2446
                     /locus_tag="VE783_00155"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HYX51832.1"
                     /translation="MEDQQTGQLVHRCLAGDAGAWEAIVRLHNRRIYNLCYRFTNSPH
                     DAEDLTQEVFIRVYRTLGSYSVEKGAFTTWLTTLTRNLLVDHFRRSKQDRVTDSMDAG
                     LGEEDDSLRLSDQIAYKGPAPDDRVASQETQVMVRAALAKISPDLREAVILRDLQDMD
                     YKEIAQVLRVPEGTVKSRINRGRMELARLISRNKKQAGYD"
     gene            2439..3176
                     /locus_tag="VE783_00160"
     CDS             2439..3176
                     /locus_tag="VE783_00160"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX51833.1"
                     /translation="MTERTSQTGMDCTQFEALLAEALDNLGSLRPEVQREFEAHRLSC
                     GNCGPLWAEVREGMLMLDALEEVEPPKNLVHNILAATSHAQAGAAGTAGAAVRQPVRK
                     GWLAWASVRPVLSSRFAMSFGMAFFSIGLTLSALGVNMKDVGKMVAHPTMLRKTVVLQ
                     YTSVEARVQRYYDNLRLVYEVETRVQGLKKAAQPSNDNNGSKPGPQNRSTPPDTSGQP
                     AQHENYSQERDGSLEARSTWKNEGAQI"
     gene            3173..3970
                     /locus_tag="VE783_00165"
     CDS             3173..3970
                     /locus_tag="VE783_00165"
                     /inference="COORDINATES: protein motif:HMM:NF012850.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="B-box zinc finger protein"
                     /protein_id="HYX51834.1"
                     /translation="MNCAVHTDVPANAFCRTCGKALCGNCKKDVMGQIFCEPCLAARI
                     QGNVVTGAPVRPVAVPVTAVPGAPSPGAALILGFIPGVGAMYNGQFMKALAHVVIFVL
                     LIIAADNISGVFGVLIAFWVVYMAFEAYKTAEAKKLGLPLPDPLGIDRMLGLQGLGGT
                     GVPSGTNVVAPAGSVPTAVGVPPVSTSDAYAAAPMMSGPGTSSMPSVQPQAPPAESAP
                     TGAIVLIILGVFFLLSTSGFFSMRHFAPLLVIGLGIWIAYKRLAQKS"
     gene            4041..4367
                     /locus_tag="VE783_00170"
     CDS             4041..4367
                     /locus_tag="VE783_00170"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX51835.1"
                     /translation="MGAALIITAGVLMLLQSNGVVRMEQSWPVVLLVVGAFSFLGHTA
                     SIEGHVQPYGAGPAQVPPQPWAGVAPVQQPSPTPWSSGEMPAATTTTSTSSEQNSPNN
                     SQVQNP"
     gene            4364..>4710
                     /locus_tag="VE783_00175"
     CDS             4364..>4710
                     /locus_tag="VE783_00175"
                     /inference="COORDINATES: protein motif:HMM:NF039187.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5668 domain-containing protein"
                     /protein_id="HYX51836.1"
                     /translation="MSSPTQVPYYPERRPRSIFGPLLLIAIGVAFLLKNLGVISLHGF
                     GRWFAHYWPLLLILWGVIRLGEYLWARQQGYAMPRLGGGAIVFLVFFVISGLIATRAA
                     RVDWDELGHNIRI"
BASE COUNT         1003 a         1271 c         1544 g          892 t
ORIGIN      
        1 cacgtcgcca ataccaggga tattcctgct gctatggaag tacgaaccgc cgtatttttt
       61 caatgtgcgc cgactttggg cggcagactg tcattcttcc ggcacaggcg agggcgcctg
      121 tgctacaaag cctgctatcg atcgaccatt tttgagacag cttctagtaa ttagcaatta
      181 gccaaaacaa acaattagag cgcgaaggta caacggggat agggatcgct cgcgttcgct
      241 cgggataaac cacacaggtc acccaaaacg ggtggccttt tttattgaaa ggaagaggca
      301 gatggcgcag ataaagaaga tgagcgcgga acagatgcag acgatgatcc aggaatgcgc
      361 ggggaagcta ggcaggacgc ccaccatgaa agagctgctg aaaatgaccg gataccggat
      421 cagcaaaacg ctggtggcgc gccggtttgg gagctacctg atggcgctga aggcctgcgg
      481 actgcaatcc gaatggagga attcaacggt tacggacgtg gagctttttc tctcatgggc
      541 ggcggcagcg cgcgaactgg gagccctgcc gacggtcatg cagtatcagg cgctgagaaa
      601 caggtcacag cgtccgattc tgaagctggt gaagaaatgg gcggatgtcc ccaacaagat
      661 gatggccatt atgcaggaac agaacctggc ggcggagtgg gaagacgtgg cgcggatgat
      721 agagcagcgt gagctggaga aacccgaagc agcgggccag cgcgcaagac gcgctgccag
      781 ggcggatggg agcagcggcg aggagcggac gccgagggac acgcgagtgg cgaatgcagg
      841 agcggcgggt gcagaagtga tgcctgaggt gcgccctgcg ggtgagatga ggtgcgatcc
      901 gtggcgcgag gcgctggtgg agcctccgga attgatagac ggccagccgg tttttggaga
      961 cccgattggg catccggcga tggcgtttgc gccaacgaac gaagccacgc tggcgatcct
     1021 gtttggggcc atggcggtgc agttgggatt tgtgatcctg cgggcgcagc agccttgccc
     1081 ggatgtgctg gcgctgcgga agatgaaagg cggctggcag ttgcagaaga ttgagctgga
     1141 gattgagagc atcaatttcc tgcggcacat gcacgacaag cgcgacgcgg atttgattgt
     1201 gtgctggaaa cataactgga aagactgtcc ggtgccggtg ctggagttga gccagttctt
     1261 ttgatcgggg gatctggtga tgggaaaggc aagggcttag ccgcgaatgg acgcgaacaa
     1321 gcgcgaatga ggaaggagtt agccatagcc ggcatcgcgc gtaatcgccg gaatcggaaa
     1381 agcaaaacca ttcaccgcaa aggacgcaaa ggtcgcaaag gaaggacttg gaaacccagt
     1441 tagccacaga tgaacacggc tccggggatc gccgggatcg cgcggagcgc acggaatcgg
     1501 aaacccagga cattaccgca ctcgctgatg gaatttcagc cggtaccgac agcatgaaaa
     1561 actgtgttca ggctcacgcc caacggcagc agagcaggcc cctcgtcgtg ctcgccgtcg
     1621 caagctcggc tacgcactcg ctcggggtgg gtccttcctg gggttagttc tgcggccact
     1681 atcggcggca cggaacgatg cggctctttg gggcagagga cgcagagagc gcaaaggaac
     1741 cagctccgca gattgcttcg cctgccctgt ttcctgtaaa ccattgaact gagaacacct
     1801 ttttcacgta actatttcca cggattgggg acggggagac tgcttggagg accagcagac
     1861 aggacaactt gtccaccgat gcctggcggg tgacgccggg gcatgggagg caattgtgcg
     1921 tctgcacaac cggcggattt acaacctgtg ctaccggttc accaattccc cccacgacgc
     1981 ggaagacctg acgcaggaag tgtttatccg ggtgtaccgg acgctgggca gctatagtgt
     2041 tgaaaaaggg gcatttacca cctggctgac caccctgacc cgcaaccttc tggtggacca
     2101 cttccggcgc agcaagcagg accgggtgac cgactcgatg gacgccgggc tgggcgaaga
     2161 agacgattcc ctgcggctga gcgaccagat tgcctataag gggcccgcgc cggatgatcg
     2221 ggtcgccagc caggagacgc aggtgatggt gagggcggcg ctggccaaaa tatcgccgga
     2281 tttgcgggag gcggtgatcc tgagggacct gcaagatatg gattacaaag agattgccca
     2341 ggtgctgcgg gtgccggagg gtacggtgaa gtcgcggatc aaccgcggaa gaatggaact
     2401 tgcacgatta atttctcgta ataaaaagca ggcaggttat gactgagagg acgtcacaaa
     2461 ccggaatgga ttgcacccag tttgaggcat tgctggccga ggcgctggac aacctgggct
     2521 cgctgaggcc ggaggtgcag cgggagtttg aggcgcacag gctgagctgc gggaattgcg
     2581 ggcctttgtg ggcggaagtc cgcgaaggca tgctgatgct ggacgccctg gaggaagttg
     2641 agccgccgaa aaacctggtc cacaacattc tggccgcgac ttcgcacgcc caggctgggg
     2701 cggcagggac ggcgggagct gcggtaaggc agcccgtccg caagggatgg ctggcgtggg
     2761 cgagtgtaag gccggtgctg agctcaaggt ttgccatgtc gtttgggatg gcgttctttt
     2821 ccatcgggct gacgctgagc gcgctgggcg tgaatatgaa ggatgttggc aagatggtgg
     2881 cgcatccgac gatgctgcgg aaaacggtgg tgctgcagta cacgtcggtt gaggcgaggg
     2941 tgcagaggta ttacgacaat ctgcggctcg tgtacgaagt tgaaacgcgc gtccagggcc
     3001 tgaagaaagc cgcgcagcca agcaatgaca acaacggaag caagccaggg ccgcagaatc
     3061 gcagcacacc tccggatacc agcggtcagc cggcgcaaca cgaaaattac agccaggagc
     3121 gcgacggcag cctggaagca agatcaacgt ggaagaacga aggagcacaa atatgaactg
     3181 tgccgtacat actgatgtac cggctaacgc cttttgccgg acctgcggca aggccctgtg
     3241 cggcaactgc aaaaaggacg tgatggggca gattttttgc gagccgtgtc tggccgcgcg
     3301 tattcagggc aacgttgtta ccggtgcgcc ggttcggcct gtagccgttc ccgtgaccgc
     3361 cgtccccggc gctccgagcc ccggcgctgc acttattctc ggctttatcc ccggcgtggg
     3421 cgccatgtac aacggccagt ttatgaaagc cttggcgcac gtggtgatct tcgtcctgct
     3481 gatcatagct gccgacaaca tctcgggagt cttcggggta ctaatcgcct tctgggtggt
     3541 ttacatggcc tttgaggctt acaagacggc cgaggccaag aaacttggcc tgcccttgcc
     3601 ggatcctttg ggtatcgatc gcatgctggg cctgcagggc ttgggaggta ccggggttcc
     3661 gtctggtaca aacgtggttg cacccgccgg cagcgtaccg accgctgtgg gcgtgccgcc
     3721 cgtctcaacc agtgacgctt acgccgccgc tccaatgatg tccgggcccg gtaccagttc
     3781 catgccatcc gttcagccac aagctccgcc ggctgagagc gcgccaactg gcgctattgt
     3841 tctgattatt ctcggcgtgt tctttttgct gagcacgtct ggtttcttca gcatgcggca
     3901 tttcgcgccg cttctggtga tcggcctggg catttggatc gcctacaagc gcctggcgca
     3961 gaagagctga ggtggagagc atggatcctt acgtaagaaa tccgaaatgc tcgtgcgcgc
     4021 gatgccgtgc ccgtgatttg atgggcgccg ctctgatcat caccgccgga gtgctgatgc
     4081 tcctacaatc taacggcgtg gtacggatgg aacagagctg gccggtggtc ctgcttgttg
     4141 tgggagcgtt ctctttcctc ggccacaccg cctccattga aggccatgtg cagccgtatg
     4201 gagccggccc ggcgcaagtt ccaccgcaac cttgggcggg agtagcgcca gtccaacagc
     4261 cttcgcccac gccgtggagc tccggcgaaa tgccggctgc aaccacaacc acttcaactt
     4321 cgagcgagca aaattcgccg aacaactccc aggtacagaa tccatgagct caccaacaca
     4381 agttccctac tatcccgaac gccgtccgcg ctccatcttc gggccgctgc tgctgatcgc
     4441 cattggcgtg gctttcctgc tcaagaacct gggcgtgatc tcgctccacg gcttcggccg
     4501 ctggtttgcc cattactggc cgctgctcct gattctctgg ggcgtgattc gcctgggcga
     4561 atatctctgg gcgcggcagc agggttatgc catgccccgc ctgggcggtg gcgcaatcgt
     4621 cttcctggtc ttcttcgtca tcagcggact gatcgcaacg cgggctgcac gcgttgattg
     4681 ggacgaactg gggcacaaca tcaggatcga
//
LOCUS       DASQYP010000008        13622 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_105995, whole genome shotgun sequence.
ACCESSION   DASQYP010000008 DASQYP010000000
VERSION     DASQYP010000008.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 13622)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13622)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13622
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_105995"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..878
                     /locus_tag="VE783_00180"
     CDS             <1..878
                     /locus_tag="VE783_00180"
                     /inference="COORDINATES: protein motif:HMM:NF017019.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF711 family protein"
                     /protein_id="HYX51837.1"
                     /translation="SDDANQAELLGEIIANTQTINGFVVVVDSAGIHWNGIHSAARVN
                     KYLQDHTDHGEGNFRFAAGAFPPLNGPFFPVTYTQGAGRSFAVGIESAGVVNQAFSGA
                     NGDLVAAGDKLVQMLGSEAKKVEEIARRAEKMTGWTYQGIDLTPVPLKDVSIGAAIET
                     LLDGPIGSPGSLSAAFTITSAIQRIPVLHAGYSGLMLPVLEDSVLARRWEAGRVGRDA
                     LLSYSAVCSAGLDAIPLSGETTQQELENIIADVASLSVKWKKPLSARLLPAPGKRVGE
                     MTDFTSRYLVNIRIR"
     gene            complement(892..1416)
                     /locus_tag="VE783_00185"
     CDS             complement(892..1416)
                     /locus_tag="VE783_00185"
                     /inference="COORDINATES: protein motif:HMM:NF009807.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative metal-dependent hydrolase"
                     /protein_id="HYX51838.1"
                     /translation="MPDPRYPIGAFVPDQNPTPESRARHIEQIAGLPQKLRAASSGLS
                     VQQLETPYREGGWSLRQVAHHVPDSHLNAYVRFKLALTESVPTIKPYDESAWARLKDS
                     EQTPIEVSLALLDGLHQRWVVLLKSMQPEDFHRKLNHPESGVQNLDRVLALYSWHGNH
                     HLAHITTTRERMKW"
     gene            1817..2038
                     /locus_tag="VE783_00190"
     CDS             1817..2038
                     /locus_tag="VE783_00190"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX51839.1"
                     /translation="MRSNLIYDALDTVENRYLLCQLVSKATRQFHKPNTRIQETMNDV
                     LVRVGDAKETEEVINTTTVKVAEPERRAA"
     gene            2173..3423
                     /gene="rho"
                     /locus_tag="VE783_00195"
     CDS             2173..3423
                     /gene="rho"
                     /locus_tag="VE783_00195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017492510.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004386 - helicase activity [Evidence
                     IEA];
                     GO_function: GO:0008186 - ATP-dependent activity, acting
                     on RNA [Evidence IEA];
                     GO_process: GO:0006353 - DNA-templated transcription
                     termination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination factor Rho"
                     /protein_id="HYX51840.1"
                     /translation="MTIAELKEKNITELTKIARTLDLPGASGLRKQDLIFKILQAQSE
                     KEGHIFAEGVLEILPDGYGFLRSPDYNYLPGPDDIYVSPSQIRKVDLKTGDTISGQVR
                     PPHEGEKYFALVKIEAVNFESPEEARNKILFDNLTPLYPQERLKLETVRENISARVMD
                     LLTPVGKGQRGLIVAPPRTGKTMLLQNIANSITTNHPEVVLIVLLIDERPEEVTDMQR
                     SVKGEVISSTFDEPAARHVQVAEMVIEKAKRLVEHKRDVVILLDSITRLARAYNTIVP
                     PSGKVLSGGVDSNALQRPKRFFGAARNIEEGGSLTIIATALVETGSRMDDVIFEEFKG
                     TGNMEIILDRKLVDKRVFPAIDIQRSGTRKEELLIPKEDLARIWVLRKVLNPLSPVEA
                     MELLTERMAKTRSNAEFLANMSSL"
     gene            3688..4986
                     /locus_tag="VE783_00200"
     CDS             3688..4986
                     /locus_tag="VE783_00200"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX51841.1"
                     /translation="MAHKRQSAGFHVSYVTITYRSVLMGLTAMFGLALIVIYFAFPDF
                     SNRMILAGQMKMGNALSRFGVGSATASGPVTEPGPQQAHFTNLVGLVRVRKASSNVWL
                     TADYSLALERNDVVQTDGEAMARVVFTDGTSYSVKPGSLIVIQENSVTAQQQTRVAVQ
                     VTTGTVDLSTNETLTRGSKSQVIVGDTTANMAPSSAATVVNDPTRDERSVTQTKGTSE
                     LTRGTTTVALGTNEKATLPTDSTTIAKSKVIAPPTLMAPKAGDVVHLDPKTKSVSLYW
                     SLVDGAKGYHLKLSKNQFFSGQPVVEEKNWQHLELAVQGLEPGTYFWEVQAVGDNGKE
                     SVAADRSSFTIVSKSDSSANLLLDVEPFIQHGHTFEVRGKTEPGARVIVNGQEVPRVS
                     SEGKFTHYTNQLPPGENWITITAQDAKGGYNVVSRPVNIQ"
     gene            5203..6204
                     /locus_tag="VE783_00205"
     CDS             5203..6204
                     /locus_tag="VE783_00205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002621977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0000902 - cell morphogenesis [Evidence
                     IEA];
                     GO_process: GO:0008360 - regulation of cell shape
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein"
                     /protein_id="HYX51842.1"
                     /translation="MFSSDLAIDLGTANTLVYAKGKGIVVNEPSIVAINKNTGEVEAV
                     GKEAKEMLGRTPGNIVAIKPMKDGVIADFKVTEKMLNYFIQKAHNRKMLVHPRIVIGV
                     PSEITQVEKRAVMDSAYRAKASEVHLVEQAMVAAIGAGLPITEPSGNMVVDIGGGTTD
                     IAVISLSGIVYSRSVRMAGNQMDEAIMNYLKRKYNLLIGERTAETIKIEIGSAYPLDK
                     PLTMEIKGRNLIEGVPKTITIDDSEIREALSECISTIMNAIRVALERTPPELSADISD
                     RGIVLTGGGALLKNLDKRIREETGLPVSIADDPLASVVLGTGKMLSDFKLLRKISID"
     gene            6271..7938
                     /gene="mreC"
                     /locus_tag="VE783_00210"
     CDS             6271..7938
                     /gene="mreC"
                     /locus_tag="VE783_00210"
                     /inference="COORDINATES: protein motif:HMM:TIGR00219.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008360 - regulation of cell shape
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein MreC"
                     /protein_id="HYX51843.1"
                     /translation="MENFFSRYKNPLVLMLILFIQVVALATQVKRAETGGRGATSSGG
                     TRLIRVWTVTAITPVERVLVSTGHFFRSNWHNYIDLHDARKQNQELQEELARLKLEQV
                     RLREDASQAQRLQTLLGFRERYVGQTMAAQVIGASGSEQSRVLYIDKGTRDGVRVDMA
                     VITPDGVVGKIKDVFPLSSQVILINDRDGGAGVILQNSRLQGVLTGTPQGELKIKYIM
                     SDENVAVGEPVVTSGGDRIFPKGMPVGTVSEVNPDHEGDPFLSIKVKPASNLSQLEEV
                     LIITKQTEQSPQLAAGNNTVRAADILAERLPTVNPTPSPTPAKTPGASGGAGANPAAS
                     PRPSPATGAAPTTAGTGTIKPPITSSSPRPSTGVRGSDTTSTGTAGASPSPRPSLVLG
                     AASPRPPATATGSPRPSPAAGIATTTSGTAGASASPRPSPSPGAANTTGTTKLPATTS
                     PGTGAQLPKAMVSPRPVGQPGATGTGTPGQGTANPTAQKKTVPSATPGASPSGTPRNP
                     GATGTPAAGASPTATPRRPRPTPSATPTPTPAETATPSVGAAARPPR"
     gene            7935..8462
                     /gene="mreD"
                     /locus_tag="VE783_00215"
     CDS             7935..8462
                     /gene="mreD"
                     /locus_tag="VE783_00215"
                     /inference="COORDINATES: protein motif:HMM:TIGR03426.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0008360 - regulation of cell shape
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein MreD"
                     /protein_id="HYX51844.1"
                     /translation="MNYAAVSLTSREEVEVHRFSWVASFGIPLLAIFVQSFFTRHVQF
                     LETFDLPLLVTIFFAVARRRPIPGMITGALIGTLQDSIAGIPVGLNGIAKTIIGYLAS
                     SLGVKLDVDNPGSRFLMTFAFYIVHRLVYVVIAIWLAGMDEQVRWTHSLIAALANGLL
                     AVVLFAMLDKLKERA"
     gene            8844..10913
                     /gene="mrdA"
                     /locus_tag="VE783_00220"
     CDS             8844..10913
                     /gene="mrdA"
                     /locus_tag="VE783_00220"
                     /EC_number="3.4.16.4"
                     /inference="COORDINATES: protein motif:HMM:TIGR03423.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein 2"
                     /protein_id="HYX51845.1"
                     /translation="MSGRDEKIPALKLTVVQYVILGVFLVLSYGLWSLQVRKSDEYFT
                     RAEQNRIRRVPVLAPRGKLLDRDGQLIVDNYPSFSALLLRDQGRDLNADAQKIADGLH
                     ISADEIREKVRRYALARKPSFEPIIIKDDITPDESAFIESHRDQLPELETLMVHRRLY
                     PKNGFLAHLIGYVGEVSEEMLNSPKFEVYQRGDIVGQSGVELQYNDVLMGRDGSRRVI
                     VDSHGREVGRPPDANVPAIPGQKLRLTIDLDVQKAAEQALEGKNGAVVAMDPRNGEIL
                     AMVSRPTFDPNDFAVRISAKEWNQLVTDPAHPLLNKAIQAQLAPGSVFKIIMSVAGTN
                     EGIAQNLHVNCPGGGTFYGRYFKCWVVAEHRVHGAVDLSKGIYQSCDVFFYTLAERLG
                     IEKIAKWATAMGLGKRTGIDLPNEVSGVMPSEEWKMKTFRQKWYAGEVISVGIGQGAV
                     ATTPIQLARAIGGIAMGGTLYRPHVVNPDQLPDQFKGLVNASTPDVTHVQVDPQSWIT
                     ITDAMAGVVTPGLGTAPSAHLQGIDFAGKTGSAQIISNKLRESKGFSGKQYNDNGWFA
                     GVAPRRNPEIVVCVLSEQGEHGYLAARVASQVIKAYVEKQRRLRNNPTLFSDKADPGS
                     VPIAGMWTTTSPAEAEPQQTAAAQEEQPADEHLHGGTLLMKLAPTNLAKKVQPATVPG
                     IGVVKGD"
     gene            10913..12019
                     /gene="rodA"
                     /locus_tag="VE783_00225"
     CDS             10913..12019
                     /gene="rodA"
                     /locus_tag="VE783_00225"
                     /inference="COORDINATES: protein motif:HMM:TIGR02210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008360 - regulation of cell shape
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein RodA"
                     /protein_id="HYX51846.1"
                     /translation="MRNVNFRDFDWVLFSFVLLICSLGVLEIYSSTFGTKFAATSGTP
                     LYVKQVYWIIGGVVLMFVVSLLNYQMLLENAHWFYIAAVLSLLAVAIFGKKYLGARRW
                     IQFPGGFHFQPSEWVKLVLILAMAKYFSDENDRLTSTLDVVKAGMIVGVPMLLVLKQP
                     DMGTALTYVPLAIMALFLGGIQVRHALILLLVAGILAPAVWHYGLKPYQKDRLTTFLH
                     PEADSQKSGYQLEQSKIAVGHGGIWGRGIRGGSQTQGAFLPEPHTDFIFAAWSEEHGF
                     VGAVALLLLYFLVLMRLVHNAQTAPDRAGGFVVMGVVAVLLFHILVNAGMVVGYMPVT
                     GIPLPLMSYGGSSLLFMFLALGIVMNVRMRRFVN"
     gene            12408..>13622
                     /locus_tag="VE783_00230"
     CDS             12408..>13622
                     /locus_tag="VE783_00230"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX51847.1"
                     /translation="MSKELFVSSTPHETKVAVVEDDQLSEVYFERENEYTLAGSIYKG
                     RVTRVLPGMQSAFVNIGLERDAFLYVSDFLLEEEDSEGLEQAVSRSRPIITEAPEDQA
                     EAMGAPLEAQDIIPPAEEAGEEEDGNQESASASREAAGEEEGEREGARKWKGRRRRRG
                     RGGRYQDREEGGERPAREEGQETRPERNGTFAHREEPAHAEPTRHEPVAHEASHTPFV
                     LPGESISKYQPHGSTPARDEKQAVRSPRPSVRPSTEYSFNPSEFTPGSMVLPGESISK
                     YRHEPPVSRSAVAEPQEPAVQEAQVEEETYHHDVPEPDIQEHHDESSSAVALAVPAET
                     EPHTEERREQTTEQPPHAQEEQRFESMNVAAAFAGAEAETETEFQEEEEVAEPEQAAH
                     KPAAEVEAVHEEE"
BASE COUNT         3060 a         3754 c         4192 g         2616 t
ORIGIN      
        1 acagtgatga cgcaaaccag gcagagctgc tcggcgaaat catcgccaac acccaaacca
       61 tcaatggctt tgtggtagtg gtggactctg ccggtatcca ctggaatgga atccattcgg
      121 ccgcgcgggt gaataaatat ctgcaggacc acacagatca tggagaaggg aattttcgtt
      181 tcgccgccgg tgccttcccg ccgctgaacg gtccgttttt tccggtcacc tatacgcagg
      241 gcgcggggcg gtcctttgct gtggggattg agtccgcggg cgtggtgaac caggcattct
      301 caggagcaaa cggcgacttg gttgctgctg gtgacaaatt ggtgcagatg ctcggcagtg
      361 aggccaagaa agtggaagag attgcccggc gcgccgagaa gatgacaggc tggacgtacc
      421 aggggatcga cttgactcca gtgccgctga aagatgtttc cattggcgcg gccatcgaga
      481 ctctgctgga tggcccaatt ggttcgcccg gctcattgag cgcggcgttc actattacct
      541 cggcaatcca gcggataccg gtcttgcacg ccggctacag cgggctgatg ttgccggtgc
      601 tggaagactc ggtgctggcg cggcgctggg aggcgggtcg agtcggtcgg gacgcactgc
      661 tctcttactc agcggtgtgc agcgcgggtc tggatgcaat tcccctgagc ggggagacga
      721 cccaacagga actggaaaac atcattgccg acgtcgcgag cctctccgtg aagtggaaga
      781 agccactctc ggctcgattg ctgccggcgc cgggcaagcg cgtgggtgag atgacggact
      841 ttaccagccg ctatctggtc aacattcgaa tccgttgaag gcggtcagcc gctaccactt
      901 catccgttca cgtgtggtgg tgatgtgggc gaggtgatgg ttcccatgcc atgaataaag
      961 ggccagcacg cggtcaaggt tttgcacgcc cgattcgggg tgattcagct tgcgatgaaa
     1021 atcttccggc tgcatggatt tgagcagaac cacccagcgc tggtgcagcc catcgagcaa
     1081 tgccagtgaa acttcaatgg gcgtctgctc gctgtctttc aaccgcgccc aggcgctttc
     1141 gtcgtagggc ttgattgtgg gtacgctctc tgtgagcgcc aacttaaagc gaacgtaggc
     1201 gttcaagtgg ctatcgggta cgtgatgtgc gacctgtcga agactccatc cgccttcgcg
     1261 gtatggggtt tccagttgct ggacagagag accgctcgaa gcggcgcgca atttttgcgg
     1321 tagtccagcg atctgttcaa tatggcgtgc gcgagattcc ggggtgggat tttggtcggg
     1381 aacaaaggcg ccgatggggt agcgaggatc gggcatacca cctcgttaat agttaagagt
     1441 tcagaaccat catgccacaa tgcgtgctgc tccaacaaaa caagggactt aagtaagttt
     1501 cagaagaaaa cgaatttcct tgacgtcaag ggcagatggc gtataacttg tagcatccgc
     1561 gggcgaaagc acgcagttct ggcaacctcc gggacatttc agccgcttca agaaattgaa
     1621 gtttttaagc aactcagaag ccgcctgtgg cgtctaataa tcgcaccagg gtctctggaa
     1681 ctcccaacac accagctttt gttgtaccgc taagagtact gagggcagtt tgggcatgtg
     1741 ctctgtcccg ggtcgcggac cttgtaagaa gttgatttta ttcgcaattc attaagtttt
     1801 gataaggaga acaaacatgc gctcaaacct gatctatgac gcgctcgaca cggtggagaa
     1861 ccgttatctt ctctgccagc tggtgtccaa ggcgacgcgt cagttccaca agccgaatac
     1921 gcgcatccag gagacgatga atgacgttct ggtgcgtgtt ggcgacgcca aggaaaccga
     1981 ggaagtgatc aacaccacaa ccgtgaaagt tgcagagccg gagcgtcgcg ctgcataatt
     2041 aatgttcctg aaaagcctgc cgggtggaac cacccggcag gtcctcagaa agacctgagg
     2101 cctaacaagt ctcgcctgct gtaacccagc gttcaattcc ttcccagaaa tattcaatcc
     2161 cgtaggtgac aaatgacaat tgcggagctt aaagaaaaaa acataactga gcttactaag
     2221 atcgcgcgca ccctcgacct tcccggcgcc agcggtctgc gaaagcagga cctcatcttc
     2281 aaaatcctgc aggctcagag cgaaaaagag ggacacatct ttgccgaggg cgttctggaa
     2341 atcctgcccg atggctacgg tttccttcgt tcccccgact acaactacct gcccggtcct
     2401 gacgacattt acgtttctcc ctcccagatc cgcaaggtcg acctgaaaac aggcgacacc
     2461 atcagcggcc aggtgcgtcc gccgcatgaa ggcgaaaaat attttgcgct ggtaaagatc
     2521 gaggcggtca actttgaatc gccggaagag gcgcgcaaca agatcctgtt tgacaacctg
     2581 actccgctgt atccgcagga gcggctgaaa ctggagaccg taagggagaa catcagtgcg
     2641 cgcgtcatgg acctgctgac cccggtgggc aaagggcagc gcggcctgat cgtggcgcct
     2701 ccgcgtaccg gcaagacgat gctgctgcag aacatcgcca attcgatcac aacgaaccac
     2761 cctgaagttg tgctaatcgt gctgctcatt gacgagcgcc cggaagaagt aacggacatg
     2821 cagcgctcgg tgaagggcga agtgatctca tcaaccttcg acgagccggc agcccgccac
     2881 gttcaggtgg ctgagatggt gatcgaaaaa gccaagcgcc tggtggagca caagcgggac
     2941 gtagtgattc tgctggattc gatcacgcgt ctggcccgcg cgtataacac gattgttccg
     3001 ccttcaggca aggtgctctc cggcggcgtg gattccaacg cgctgcaacg tccaaagcgc
     3061 ttcttcggcg cggcccgaaa cattgaagag ggaggatcgc tgacgatcat tgcaacggcg
     3121 ctggttgaga ccggttcgcg catggatgac gtgatcttcg aagagttcaa gggcacgggc
     3181 aacatggaaa tcatccttga ccgcaagctg gtggataaac gcgtgttccc ggccatcgac
     3241 atccagcgct ccggaacgcg aaaggaagaa ttgctcattc ccaaggaaga cctggcacgc
     3301 atctgggtgc tccgcaaggt gctgaaccca ctctcgccgg tggaagccat ggaactcctt
     3361 acggagagaa tggccaagac ccggtcgaac gcagagttcc tggcgaacat gagctcgctg
     3421 taagggagtg agccccaaac tgaacgacag ccgcgccctt cggcgcggct gtttactttt
     3481 ggctgcccct aaaaatgcgg ggttcctcgt aacccacttt tcaggctttt taggcagcag
     3541 taggcttgtt gactgagagg tgttgcgggg atcaccggag cgctgaggtc gagcactttc
     3601 gggcagttga cacatagatt tatggctgaa tagttgtggt actctgtagt tactaactgg
     3661 aaaactcctc attccaccag caacactgtg gcgcataagc gacaatccgc cggcttccac
     3721 gtttcatacg taaccattac ctatcgaagc gtgctgatgg ggctgacggc catgttcggc
     3781 cttgcgctga tcgtgatcta cttcgcgttc ccggatttct cgaatcgcat gatcctggcc
     3841 gggcagatga aaatggggaa tgcactctcc aggttcggcg ttggctccgc aacggcaagc
     3901 ggtcccgtga ctgagccggg tccacagcag gcgcacttta ccaacctggt ggggctcgtg
     3961 agagtaagaa aagcgagcag caacgtctgg ctcactgcgg attacagcct ggccctggaa
     4021 cgcaatgatg tggtgcagac cgatggcgag gccatggcgc gcgtggtttt cacggacgga
     4081 accagctatt cggtaaagcc gggctctctg atcgtgattc aggaaaactc ggtaaccgca
     4141 cagcagcaga cacgggtagc cgtccaggta accaccggaa cggtggacct ctcgacgaat
     4201 gagacgctga cgcgcggctc aaagtcgcag gtgattgtgg gtgataccac ggccaacatg
     4261 gcgccaagca gcgcggcgac tgtggtcaac gatccgacgc gggatgagcg ttcggtgacc
     4321 cagacgaagg gaacctcaga gttgacgcgc ggcaccacta ccgtagccct gggcacgaac
     4381 gaaaaggcta cactccccac ggattccacg accatcgcca agagcaaggt gattgccccg
     4441 cccaccctga tggcgccaaa ggcgggagat gtggtccatc tggaccccaa gacgaagagc
     4501 gtgagcctgt actggtcact ggtggatgga gcgaaaggct atcaccttaa gctttcaaag
     4561 aaccagttct tcagcggaca gccggtggtt gaagaaaaga actggcagca cctggaactg
     4621 gcggtacagg ggctggagcc gggaacatat ttctgggaag tgcaggcagt gggagacaac
     4681 ggaaaggaat ccgtggcggc ggaccggagt tctttcacga ttgtctcgaa atcagattca
     4741 agcgcgaacc tgctgctgga cgtggagccg ttcattcagc atgggcacac gtttgaagtg
     4801 cggggcaaaa cggagccggg tgcgcgcgtg atagtgaatg gacaggaagt gccgcgggtc
     4861 agcagcgaag gtaagttcac gcattacacc aaccagctcc cgccgggtga gaactggatt
     4921 actattacgg cacaggacgc aaaaggcggg tacaacgtcg tgtcaaggcc ggtaaatatc
     4981 cagtaaaatc cctattggcg cgagtgatgt tttgcttcac agtagagagt tgagtcccca
     5041 gcacagtatg tgattcaccg cttctgcccg ccggcagtgg agcgtcccag atagaacaag
     5101 agtatcgccg ggaaattaga gaagaagaaa gaagcaggta tgtcgtcaaa cggtttcaaa
     5161 ctggaaaatt cgcggattca taatctgcgc tccctgttca gcatgttctc gagcgatctc
     5221 gccattgatc tgggcacggc gaacacactg gtgtatgcca agggcaaagg cattgtggtg
     5281 aatgagccct ctattgtggc gatcaacaag aacaccggtg aagtggaagc ggtgggcaaa
     5341 gaagcgaaag agatgctggg ccgcaccccc gggaacatcg tggccatcaa gccgatgaaa
     5401 gacggagtga tcgcggactt caaggtcacc gagaagatgc tgaactactt catccagaag
     5461 gcgcataacc gcaagatgct ggtgcatccg cggattgtga tcggcgtccc ttctgaaatc
     5521 acccaggtgg agaagcgggc cgtgatggac tccgcctacc gcgccaaggc cagcgaagtt
     5581 cacctggtgg aacaggccat ggtggccgcg atcggtgccg gtctgccgat caccgagccc
     5641 agcggcaaca tggttgtgga tattggcggc ggcaccacgg atattgccgt gatctcgctc
     5701 agcggcatcg tttattcgcg ctccgtgcgc atggccggta atcagatgga tgaagccatc
     5761 atgaattacc tgaagcgcaa gtacaacctg ctgatcggcg agcgcacggc cgagaccatc
     5821 aagattgaaa ttgggtcggc ctatccgctg gataagccac tgaccatgga aattaagggc
     5881 cgcaacctga ttgaaggagt gcccaagacc attacgattg atgacagcga aatacgcgaa
     5941 gcgctttccg agtgcatcag caccatcatg aacgcgattc gcgtggcgct ggaacgtacg
     6001 ccgccggaat tgagtgcgga catcagcgat cgcggaatcg tgctcacggg tggcggcgca
     6061 ctgcttaaga atctggacaa gcgtatccgc gaagaaacgg gcctgccggt ttcgatagcc
     6121 gacgatcccc tggccagcgt agttctggga acgggcaaga tgctcagcga cttcaagctg
     6181 ttgcggaaga tctcgatcga ttaacccgag cggcggacgc ctgctgaagg tgtccgcctg
     6241 cgggggaccg accctcctga aaagcagctc atggaaaatt tcttcagccg ctacaagaac
     6301 ccgctcgttc tgatgctgat cctgttcatc caggtggtgg ctctggcgac gcaggtgaag
     6361 cgtgccgaga ccggcgggcg cggtgctacc tcctccggtg gcacgcggct gattcgcgtc
     6421 tggacggtga cggcaatcac gccggtggag cgcgttctgg tgagcaccgg ccatttcttc
     6481 cgcagcaact ggcacaacta tatcgacctg catgacgcac gcaagcagaa ccaggaactg
     6541 caggaagagc ttgcgcgcct caagctggag caggtgcggc tacgggaaga tgcgagccag
     6601 gcgcaacggc tgcagacgct gctcggtttc cgcgagcgct acgtcggcca gacgatggcg
     6661 gcgcaggtga tcggcgccag cggcagcgag caatcgcgcg ttctctacat tgataaaggt
     6721 acccgggacg gcgttcgtgt ggatatggcc gtgataacgc cggatggtgt ggtgggcaag
     6781 atcaaggacg tatttccact gagttcgcag gtgatcctga tcaacgatcg cgacggcggc
     6841 gcgggagtga tcctgcagaa ttcacgtttg cagggcgtct taactggcac gccgcagggc
     6901 gagctgaaga tcaagtacat catgtccgac gagaatgtag ccgtgggcga gccggtggtg
     6961 accagcggcg gtgatcgcat tttccccaaa gggatgccgg tgggaacggt gagtgaagtc
     7021 aatcctgacc acgaaggcga cccgtttctt tccatcaagg tgaagccggc ttcgaatctg
     7081 agccagctcg aagaagtact gatcatcacc aagcagacgg agcaatcgcc gcagctcgca
     7141 gctgggaaca atacggtgcg cgcagcagac attttggccg agcgcctgcc cacggtaaac
     7201 ccgactccat cgcctactcc ggccaagacg ccgggagcga gcggtggtgc gggcgcgaat
     7261 cctgcggcat caccgcggcc cagcccggca accggagcgg ctccaacgac tgccggtaca
     7321 ggtacgatta agccgccgat tacgagttca tcgcctcgac cgagtacagg agtgagaggc
     7381 agcgacacaa cttccaccgg cacggcgggt gcaagccctt cgccgcggcc gagtctcgtc
     7441 cttggtgctg catcgcccag gccgcctgca actgcgaccg gatcgccgcg tccaagcccc
     7501 gcggcaggaa ttgccacaac cacttctggt actgcgggtg caagcgcttc gccgcgaccc
     7561 agcccttcac cgggagcagc gaacacaaca ggcacgacca agctgccagc cactacgagt
     7621 ccgggaaccg gtgcgcaact gccgaaagcg atggtctcgc cgagacctgt tggccagccg
     7681 ggcgccactg gcacagggac gccgggacaa ggcacagcga atccaactgc gcagaagaaa
     7741 acagttccga gtgcaacgcc gggagcaagt cccagcggta cgccgcgaaa tccgggggca
     7801 acgggaacgc cggctgcggg agcttctcca acagcaactc caaggcggcc acgaccaacc
     7861 ccgagcgcaa ctccgacccc aactccggct gagacagcaa cgccttcggt gggagccgca
     7921 gcgaggccgc cgcgatgaac tacgccgccg tttctctcac ttcccgcgaa gaggtggaag
     7981 ttcaccggtt tagctgggta gcctcattcg gtattccgct gctggcaatc tttgttcaga
     8041 gcttctttac gcggcatgtc caatttcttg agacattcga cctgccactc ctggtgacca
     8101 tcttttttgc tgtcgctcgg cggcgtccga ttcccgggat gattaccggc gctctgatcg
     8161 gaaccctgca ggactcgatc gccggtatcc cagtgggact gaacggcata gccaagacga
     8221 ttattggtta tctggcgtcc tcacttggcg tgaagctgga tgtcgacaat ccagggtcgc
     8281 ggttcctgat gacatttgcc ttctacattg tccaccggct ggtctatgtg gtgattgcca
     8341 tctggctggc cggaatggat gagcaggtcc gctggacaca ctccctgatc gccgctctgg
     8401 cgaatggtct cctggcggta gtgctgtttg ccatgctgga taagctcaaa gaacgggctt
     8461 gattcctgtc gcttcgctcc aaaccgcttg atcgtatttc ccgagccgac aacgtgaatg
     8521 ctcctgatgc agtggcctcg ccgggcaggt cgggtcggcc gagttctaga atcgaaacgg
     8581 ggaagggacg gttcctgcgc ctgaaggaac ggctcaggat ttggcctgcg agccctcacc
     8641 ccatacgcga acagctcgcg tgctgaggac tcgggttccc gctacgctca cgcctcaaag
     8701 cggctcatcg taatccttcg gtaactggat tcaggcatac agcctagtta gaagacgctt
     8761 gatttgcggt actctattag cagggctcct gctaaaaatt ccaaccatta acaggtggca
     8821 agggcggcgc ctcaagcaac aacatgtccg gtcgcgacga aaaaattccg gcactcaaac
     8881 tcaccgttgt tcaatacgtc attctgggag tgtttctcgt tttgtcctac gggctgtgga
     8941 gcctgcaggt caggaagagc gacgaatact tcacgcgcgc agagcagaac cgcattcggc
     9001 gggttccggt gctggcgcca cgcgggaagc tccttgaccg cgacggccag ctgatcgttg
     9061 ataactatcc ttcattctcc gcgctgctgc tgcgcgatca gggccgcgac ctgaatgcgg
     9121 acgcgcagaa gattgccgac ggactgcaca tcagcgctga cgagattcgc gagaaggtgc
     9181 gtcgctacgc gctggcgcgc aagccttcgt tcgagccgat catcatcaag gatgacatta
     9241 ctcccgacga aagcgcattc attgaatcgc atcgcgacca gctgccagaa cttgaaacgc
     9301 tgatggtgca tcggcggctc tatccgaaaa acggatttct ggcgcacctg atcggttatg
     9361 tgggtgaagt cagtgaagaa atgctgaact cgcccaagtt tgaggtctac cagcgcggcg
     9421 acattgtggg ccagtccggc gtggagcttc agtacaacga cgtgctgatg ggacgcgacg
     9481 gatcgcggcg cgtgattgtg gacagccatg gtcgcgaagt cggcaggcca ccggacgcga
     9541 acgttccggc gattccagga cagaagctgc ggctgacaat cgatctcgat gtgcagaagg
     9601 cggcagagca ggcgctggaa gggaagaacg gcgccgttgt cgcgatggat cctcgcaatg
     9661 gcgagatcct ggccatggta agccggccca cgttcgaccc gaacgatttc gcggttcgca
     9721 tctctgcgaa agagtggaac caactggtta ccgatcccgc tcacccgctc ttgaacaaag
     9781 ctattcaggc gcagctcgcg ccgggctcgg tattcaagat catcatgtcc gtggcaggaa
     9841 cgaatgaagg cattgcgcag aacctgcacg tgaactgccc cggcggcgga actttctatg
     9901 gccgctactt caaatgctgg gtggtggcag aacatcgagt gcatggcgcg gtggacctct
     9961 ccaaaggtat ctatcaatcg tgtgacgtct tcttctacac gctggcagag cggctgggca
    10021 ttgagaagat tgcgaagtgg gcgactgcga tggggctggg caagcggacc ggcatcgatc
    10081 tcccgaacga agtcagcggc gtgatgccgt cagaagaatg gaagatgaag acgttccgcc
    10141 agaagtggta tgccggcgaa gtgatatcgg tgggaatcgg tcagggcgcg gtggcgacca
    10201 cgccgattca actggcgcgc gcgattggcg gcattgcaat gggcggaacg ctgtaccgcc
    10261 cgcacgttgt caatcctgac caactgcctg atcagttcaa gggactggta aatgccagca
    10321 cgccggatgt gacacacgtt caggtagatc cgcagtcgtg gatcaccatt acggacgcga
    10381 tggcgggagt cgtaacgccg ggactcggca ccgctcccag cgcgcatctg cagggaattg
    10441 atttcgccgg aaaaacggga agcgctcaga tcattagcaa caagctccgc gagtcgaaag
    10501 gcttttccgg caagcagtac aacgataatg gctggttcgc cggagtggcg ccgcgacgga
    10561 atccggaaat cgtggtttgc gtgctgagcg agcagggcga acacggatac ctggccgctc
    10621 gtgtggcgtc gcaggtgatc aaggcttacg tggagaagca acggcggctg cgcaacaatc
    10681 caaccctgtt cagtgacaag gctgatccgg gctctgtgcc gattgcgggc atgtggacca
    10741 caaccagccc cgccgaagcg gagccacagc aaaccgcagc agcgcaggaa gagcagcctg
    10801 ccgacgaaca tctgcatggc ggcacgctgc tgatgaaatt agcgccgacg aacctggcga
    10861 agaaagtcca gccggcaaca gtccctggaa tcggggtggt gaagggcgac tgatgcggaa
    10921 cgtcaacttc agagattttg actgggtcct gttctccttt gtgctactga tctgctctct
    10981 gggagtgctg gagatctaca gcagcacctt cgggacaaaa ttcgccgcca cgtccggcac
    11041 acccctttac gtcaagcagg tttactggat catcggcggc gtggtgctga tgttcgtggt
    11101 cagtctgctg aattaccaga tgctgctgga gaatgcgcac tggttttaca tcgccgcagt
    11161 gctttcgctc ctcgccgttg ccatcttcgg gaagaaatat ctgggcgcgc ggcgctggat
    11221 ccagttcccg ggcgggtttc acttccaacc ttcggaatgg gtgaagctgg tgctgatcct
    11281 ggcgatggcc aaatacttca gcgatgagaa tgaccggctt acttcaactc tggacgtggt
    11341 gaaggcgggg atgatcgtgg gcgttccgat gctgctggtt ctgaagcagc cggacatggg
    11401 cacggcgctc acatacgttc cgctggcgat catggcgctg ttcctggggg gcatccaggt
    11461 acggcatgcg cttattctgc tgctggtggc cggtattctg gcgcccgcgg tgtggcacta
    11521 cggtctgaag ccctaccaga aagaccggct aaccaccttc ctgcatccgg aagccgactc
    11581 gcagaaatca gggtaccagc tggagcaatc gaagattgcg gtgggacatg gcggcatctg
    11641 ggggcgggga attcgcggcg gttcgcagac gcaaggagcg ttcctgccgg agccgcatac
    11701 ggacttcatc ttcgctgcgt ggtcagagga gcacggcttc gtaggcgcgg ttgcactatt
    11761 actgttatac tttttagtgt taatgcgtct cgtccacaat gctcagacgg cgccagatcg
    11821 cgccggaggg tttgtggtga tgggtgtggt ggcagtctta ctgttccaca tcctggtgaa
    11881 cgcaggcatg gtggttggat atatgccggt gaccggcatt ccgctgcccc tgatgagcta
    11941 tggtggctca tctttgttgt tcatgttcct ggcgctggga atcgtgatga atgttcgcat
    12001 gcgccgattc gtgaactgac caggaaacaa gtttcaaagg acaaaagatt caacgttatg
    12061 ccctgacggt aacgagggcg ccggccctga aggagcgagc cggagagagt tcaagagatg
    12121 cattcccggg cgggtaacgg ccccgcactt aggcgcagag tggccacaaa cctggaaatg
    12181 cgaaggtgcc aggattcttc aaacaagtta caggcagata gctgaggccg atgactgggg
    12241 gaggccccac atgggcgaaa gtgtattcct gctcagaaca agattgagtt ccacggcatt
    12301 ccagacttcg cggcgcgcct gtccggcgca aatgcggctt ctgctctgaa ttgacttctc
    12361 tccattcctc ttcttctccg ggctggtaag cgaaaccgga gaaatccatg tcgaaagaac
    12421 tattcgtctc gtccacgccg catgagacca aagtggcggt ggtggaggac gaccaattat
    12481 cagaagtcta ttttgaacgc gagaacgaat acacgctcgc gggatccatt tacaaagggc
    12541 gggtaacccg cgtactgcca ggaatgcagt ccgcgttcgt caatatcggg ctggagcgcg
    12601 acgcgtttct ttacgtttcc gacttcctgc tggaagaaga ggactcggaa gggttggagc
    12661 aggcggtctc gcgaagccgg ccgattatca ccgaagcacc cgaagatcaa gctgaagcaa
    12721 tgggagcgcc gcttgaggcg caggacataa ttcccccggc ggaagaagcg ggagaagagg
    12781 aagatgggaa tcaggaaagc gcctccgctt ctcgtgaagc tgctggagag gaagaagggg
    12841 agcgcgaggg cgcgcgcaaa tggaaagggc gccgccggcg tcgcggacgc ggtggacgct
    12901 atcaggaccg tgaggaaggc ggcgagcgtc cggcgcggga agaagggcag gaaacccgtc
    12961 cggaacgcaa tggaacattc gcacaccgcg aggagccggc ccacgcagaa ccgacccgcc
    13021 atgagcctgt ggcgcacgaa gccagtcaca ctccttttgt cctgccggga gaatcgatct
    13081 ccaagtatca gccgcacgga tcaactcctg cgcgagacga gaagcaggcg gtcaggtcgc
    13141 cgcgaccttc tgtccgcccc tcaaccgagt attcgttcaa tccttcagag ttcacacccg
    13201 gttcaatggt gctgccgggc gaatccatat ccaagtaccg gcatgagccg cccgtgagcc
    13261 gctcggctgt ggctgagccg caggaaccgg cggtacagga agcgcaagtg gaagaggaaa
    13321 cctatcacca cgacgtgccc gagccggata ttcaggaaca tcatgatgag tccagttccg
    13381 cagtcgcgct ggcagtgccc gcagaaacgg agccgcacac cgaagaacgt cgtgagcaga
    13441 cgaccgagca gccgccgcat gctcaagaag agcagcgctt cgaaagcatg aatgtggctg
    13501 ccgcattcgc gggcgcagaa gcggagaccg agacggaatt ccaggaagaa gaagaggtag
    13561 cggaaccgga acaggccgca cataagcctg ccgccgaggt cgaagcggtt catgaagaag
    13621 aa
//
LOCUS       DASQYP010000009        13729 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_106073, whole genome shotgun sequence.
ACCESSION   DASQYP010000009 DASQYP010000000
VERSION     DASQYP010000009.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 13729)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13729)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13729
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_106073"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(153..743)
                     /locus_tag="VE783_00235"
     CDS             complement(153..743)
                     /locus_tag="VE783_00235"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX51848.1"
                     /translation="MATNAIVAGSVLVRREVQPAAFEQEYFTLRRSSGLFSHSCICFD
                     DQGVSLAYVRSITGVPRHGLPVYTDPTRSFQLLNIRRSNAGSFEVEDSFHRRRAGFVQ
                     RVEGNWLLKSAQGVTVGSMIGQSHVLGFLRRCLGQWLPQTYTLECNAEVLGSVTQEFR
                     WGRYWLNADLRADQDHLLDRRLVLAALLLEIYEHAK"
     gene            complement(975..2891)
                     /gene="ftsH"
                     /locus_tag="VE783_00240"
     CDS             complement(975..2891)
                     /gene="ftsH"
                     /locus_tag="VE783_00240"
                     /inference="COORDINATES: protein motif:HMM:TIGR01241.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent zinc metalloprotease FtsH"
                     /protein_id="HYX51849.1"
                     /translation="MNSTFKTVILWVVLLLVGVVLWNLIQHGSSGAKEAEISYTDFTN
                     AVGQNNVKKVEIEGNLARGEYNTPVDGKTNFRAYVPTNNPEMLKALDANKATKVTFKD
                     GSGSNWPMLLIQFSPLLLIGVLWFVMIRQMQTGGNKALSFGKSRARLLSMQQKKITFK
                     DVAGVDEAKEELREIIEFLREAQKFQKLGGRIPKGVLLVGHPGTGKTLLARAVAGEAN
                     VPFFSISGSDFVEMFVGVGASRVRDLFEQGKKNAPCIIFIDEIDAVGRHRGAGLGGGH
                     DEREQTLNQLLVEMDGFESNEGVILIAATNRPDVLDPALLRPGRFDRRVVVPLPDVRG
                     REEILRVHTRKIPLADDVDLSILARGTPGFSGAELSNMVNEAALNAARCNRKSVLMYD
                     FELAKDKVLMGAERKSMLLTEEEKKVTAFHEAGHAIVAALMPHADPLHKVTIIPRGMA
                     LGVTMQLPETDKHNYTRDYLETQLAVLMGGRIAEEIFLNQMSTGAGNDIERGTDLARK
                     MVCEWGMSKLGPLTFGKKDEQIFLGREIAQHRDFSEETAREIDAEVRRFINHGYDNAR
                     KIITENHDVLQRIAEALLEREVLDAAELKLIIEGKPLPARVPPNKGDDGVQQVLRPEP
                     GRTPGIAPGKPSPA"
     gene            complement(3149..3673)
                     /locus_tag="VE783_00245"
     CDS             complement(3149..3673)
                     /locus_tag="VE783_00245"
                     /inference="COORDINATES: protein motif:HMM:NF012383.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009116 - nucleoside metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosyltransferase family protein"
                     /protein_id="HYX51850.1"
                     /translation="MSNSLSQQYPKVLFSAEQIQQRVREIARQISADYQGKTLHVVGV
                     LENAFIFTADLLRALDLPVVCQFVRGAFTESATGTAEIFYSPELDVKGQDVLLVESLV
                     QSGVTTEFLIRNLMARGARTVKLAVLLDKQSARRVSLQPDYFGFLISDQFVVGYGLGA
                     PHIGRNLPYVAAES"
     gene            complement(3670..5208)
                     /gene="tilS"
                     /locus_tag="VE783_00250"
     CDS             complement(3670..5208)
                     /gene="tilS"
                     /locus_tag="VE783_00250"
                     /EC_number="6.3.4.19"
                     /inference="COORDINATES: protein motif:HMM:TIGR02432.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016879 - ligase activity, forming
                     carbon-nitrogen bonds [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA lysidine(34) synthetase TilS"
                     /protein_id="HYX51851.1"
                     /translation="MTPIPRWAVAQDGYALSYRGAPDKELYYYKVIEKVRRSVAGHGL
                     LRAGERVAVACSGGADSVALLRALLELRGELGVVISVAHFHHGIRGEEADEDCEFVSA
                     LARQFDLDLQVGRGDAPVYAGERKLSLETAARELRHAWFTELIKSGKAHKIATAHTLD
                     DQAETVLMRVLRGTGIRGLAGIAPWHREKSLIRPLLETSRAEIESYLRELNQPWREDL
                     SNQDRTHTRNRVRHDLLPLLERDFNPNVRQTLADLAQMSAIEADYWTKQLDAMTPQLL
                     KQGKPTRSGRAASGAGANVWSLDLQTLRALHPAFQMQMLSHMGHRLGCALEFKHIRQL
                     LALADGKAGKKLVLPGRLVAIRTFRELQFAPETDLKSEAAVQDYSVQLPIPGEVEVSE
                     LGTSFKASVIPSGEAELSRYNPATLLNGALLGPEVTVRNWRAGDRFFPAHTQSPRKIK
                     ELLQPGRLGRPLSGSERLLWPVVESGDQIVWMRGFPVAGEFAFRAGTAVLIEERESNS
                     EKKM"
     gene            5193..5732
                     /locus_tag="VE783_00255"
     CDS             5193..5732
                     /locus_tag="VE783_00255"
                     /EC_number="2.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family protein"
                     /protein_id="HYX51852.1"
                     /translation="MELVSYQPSYLPLFIEWRNQPLSIRHNPLESRRAEEIAHLLGAE
                     GTNLAALERFANYRWFVVLNGEPVGTVSLKNISHSMGYAEIGYGIAQSHHGKGIATTA
                     VGLLVEKVFRETPLRRLMAFVHVENQASRRVLQNLGFREEGLLREHYVIQNQPVDEVL
                     YGLLRREWKSHPRKARPGR"
     gene            5782..6498
                     /gene="ispD"
                     /locus_tag="VE783_00260"
     CDS             5782..6498
                     /gene="ispD"
                     /locus_tag="VE783_00260"
                     /EC_number="2.7.7.60"
                     /inference="COORDINATES: protein motif:HMM:NF013308.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050518 - 2-C-methyl-D-erythritol
                     4-phosphate cytidylyltransferase activity [Evidence IEA];
                     GO_process: GO:0019288 - isopentenyl diphosphate
                     biosynthetic process, methylerythritol 4-phosphate pathway
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-C-methyl-D-erythritol 4-phosphate
                     cytidylyltransferase"
                     /protein_id="HYX51853.1"
                     /translation="MKVIVIIPAAGLGTRMAPPGKGVPSKQFFEIAGTPILVHTLRCF
                     ASHPQVTDIVIALRQNEMEQCHQRLAKDGLDQKVVMVEGGEHRQDSVSNALASLKAAE
                     DDIVLVHDAVRPFVDSEIISSVIQEVQKHGAAIAGLPAVDTIKQVERAAEGAIITSTI
                     PRERVVQAQTPQGFRYELIKRAFDSAATDGYVGTDEASLVERLGESVWVVMGSPRNIK
                     ITTPGDMELAEFLLQSKSHH"
     gene            6533..6958
                     /locus_tag="VE783_00265"
     CDS             6533..6958
                     /locus_tag="VE783_00265"
                     /inference="COORDINATES: protein motif:HMM:TIGR04256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GxxExxY protein"
                     /protein_id="HYX51854.1"
                     /translation="MGVSEGYIHSELTDQILAVFYDVYNELGFGFLESVYRNALRFAL
                     TQKGLAIEQEVPVSVVFRGQSVGDFRADLVVNGIVLLELKTADAIVRAHEAQVINYLR
                     ATSLELGLILNFGPKPQVRRLLLDNVEKRKYSRVLGASN"
     gene            7002..7466
                     /gene="ispF"
                     /locus_tag="VE783_00270"
     CDS             7002..7466
                     /gene="ispF"
                     /locus_tag="VE783_00270"
                     /EC_number="4.6.1.12"
                     /inference="COORDINATES: protein motif:HMM:NF014588.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008685 - 2-C-methyl-D-erythritol
                     2,4-cyclodiphosphate synthase activity [Evidence IEA];
                     GO_process: GO:0019288 - isopentenyl diphosphate
                     biosynthetic process, methylerythritol 4-phosphate pathway
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-C-methyl-D-erythritol 2,4-cyclodiphosphate
                     synthase"
                     /protein_id="HYX51855.1"
                     /translation="MRIGYAFDSHEFRESVPLKIGGISIPHNKGLAGHSDGDVLLHAI
                     TDALLGAIAAGDIGTFFPPTDPKWKGADSAIFIAAALKQVKAAGYKITNVDSTLILAS
                     PKIVPHNKSIQKRVAELLGISPDQVGIKAKTPEGLGTENTAIAHVVVLLERA"
     gene            7715..11137
                     /locus_tag="VE783_00275"
     CDS             7715..11137
                     /locus_tag="VE783_00275"
                     /inference="COORDINATES: protein motif:HMM:NF015531.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PDZ domain-containing protein"
                     /protein_id="HYX51856.1"
                     /translation="MKKSLLTSMFCAFVLMLAAGTAGASGPLLLQKPTLSKTQIAFAY
                     AGDLWIVSRDGGQARLLTSGAGTKSDPIFSPDGSMIAFTGDYDGNVDVYVMPANGGMP
                     KRLTHHPGIDEVLGWTPDGKQILFRSGRNSYSRFNRLFTVSPEGGLPHELPLPMGEAG
                     SYSADGKSIAYVPTDNNRRLSAIGWKRYRGGKASHIWIANLSSYEIEKVPRDVSNDGN
                     PMWVGSKIYFLSDRNGPVSMYAYDLKSKKVENVLASDNDIKSASAGPGAIVFEQFGSL
                     SLLDLATGKPKHLEISVPADLPKVMPHFKKVEDEIAAADISPSGARAVFEAHGEILTA
                     PAEKGDVRNLTNTPGVMERDPAWSPDGKSIAYFSDETGEYQLHIKSPDGLGEAKKISL
                     GSPASFYYNPVWSPDSKKIAYTDKRLNMWYVDLAKGTPVKVDSTTYDLPQRTLVPVWS
                     PDSRWIAYNKQLPSHMHAIFAYSLEQSKALQLTDGLSDARFPAFDQKGQYLYFTASTD
                     VGPTTGWLDLSSINRPVTRSAYLIVLQKDKPSPLAPESDEEKAASDDSKPDTDKSAKS
                     EEKSDQEPMNPEEKAKAADAKPAKAAKAEAVTVKIDPEGISQRIVAMPIPPRSYVQLV
                     AGKAGTIFLVEGPARIAPDAQTTLWRFDLTSRKPEKITEGVNSFNVSFDGKKMLYAKG
                     RGRNQHWFIASAAAPAAGNGPAAAGKPDTPLKLERMEVMIDPRAEWKQEYNEVWRIER
                     DFFYDPNLHGLNLQATSKHYEPYLENIGSRYDFSYLLAEMLGELTVGHMYIRTPLDPP
                     SDEGKVGLLGADYTIENGRYRFSHIYEGENWNPQLRAPLTQPGVNVQQGEYLLAVNGR
                     DLKGSDEIFALFAGTADKSTVLRVGSSPDGKGAHNVSVVPIESETALRNRAWIYGNLE
                     KVEKTTNGRVAYVYLPDTGFGGYTSFNRYFFAQVGRDGAVIDERFNGGGSAADYVIDY
                     LRRPLANYWMTREGQDFTTPVGAIFGPKAMIINQFAGSGGDALPWYFRDAKLGPLVGT
                     RTWGGLVGIYDYPQLMDGGGVTAPRVAFYNRDGQWDVENHGVAPDIEVEITPKDWMTG
                     RDPQLDKAVAAVMDGLKKNPLPVAKRPTFPNYHGKPSQGMPAAGGSGGSGKR"
     gene            11443..12393
                     /locus_tag="VE783_00280"
     CDS             11443..12393
                     /locus_tag="VE783_00280"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="right-handed parallel beta-helix
                     repeat-containing protein"
                     /protein_id="HYX51857.1"
                     /translation="MRKLVLSLVLVVSAFFLGSCGSVQAAASLAQQVSLGGIVNLPAG
                     TITLDCSSQFSIARGTIVQGQGRGVTIINDVCPSGNTFTVDLSAPGTAVKIQDLTVTH
                     NTATGTVLSISGSGGKQSPAPTVVVSSVDFSQAQNCIVTTGLNLFFLEKSIVRGCGGD
                     GANINSFGVTLHDNWFEFNQGNGVSFVGSGFCASCFGNEYNSNAGHGFIYNNSDGADG
                     RHTNEYVDSNGDVGVVVHGARDFTFNNGWVGSNRGGGMVIGDTEIGTSLVGNTFTNNF
                     GPNLIVEQRSSPLRLSGNLSSNPHDPCDSEINGRCTSMNQ"
     gene            12461..13276
                     /locus_tag="VE783_00285"
     CDS             12461..13276
                     /locus_tag="VE783_00285"
                     /inference="COORDINATES: protein motif:HMM:NF013866.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prolyl oligopeptidase family serine peptidase"
                     /protein_id="HYX51858.1"
                     /translation="MRPTLVVVLALIFAGLAAPASGVVTFPSGSLTLHGVLYKPAGKG
                     PFPAVLFNHGSAPGMYSQEAFDSIAPLFTQAGWIFFAPWRRGQGLSANAGPYIGDQIT
                     QSMTEGGIPAASATMVHLLETQHLQDQLAGLAWLRKQSFVDAKRIAVAGNSFGGIETL
                     LGAEKESYCAAVDIAGGAESWKYAPQLQSSLIRAATHAQAPVLFVQAENDYDLAPSNV
                     LSEAARKSGKTVEVKIYPPFGKTAEDGHSISYRGASIWQPDALRFLERNCRAH"
BASE COUNT         2990 a         3998 c         3906 g         2835 t
ORIGIN      
        1 tgtctgtccc acacaagcaa aaaccagcca agcccaccca agatgatttt tttagtcgct
       61 caccggatcg atgagtagct gttggcgcaa gctccaagaa gaacgggaca gacaagagtg
      121 tctgtcccac acaacgccgg aatggcgccg cgttatttgg cgtgttcgta gatttccagc
      181 agaagggctg cgagcaccag gcggcgatcc agaagatggt cctgatcagc gcggaggtcg
      241 gcgttgagcc agtagcgtcc ccagcgaaac tcctgggtca cgctgcccag cacttcagcg
      301 ttgcattcga gcgtgtaggt ttgaggcagc cattgtccca gacagcggcg caggaagccg
      361 agcacatggg actgcccaat catgctgcca acggtgacgc cctgcgcact tttgagcagc
      421 cagttgcctt ccacccgttg gacgaagcca gcgcggcggc ggtgaaagga atcttccacc
      481 tcaaagctgc cggcgttgct gcggcggatg tttaggagct ggaagctgcg ggttgggtcg
      541 gtatagacgg gcaggccgtg gcgggggacg ccggtgatag agcggacata agcgaggctg
      601 acgccctgat cgtcaaagca gatgcaggaa tgggaaaaga ggccgctgct gcggcgaaga
      661 gtgaagtact cctgctcaaa tgccgcgggc tgaacctctc gccttacaag aacgctgccg
      721 gcaacaatgg cattggtggc catgcctggg taccctccgg aatcaatagc acaaaatgac
      781 gagttacagc gacagcaaaa tgagggtcga acctggaaaa tgagggatga cgcccaacaa
      841 cagaacctat atccctgctc agcagaggag cagctactct gattctgatg ctgcgtgggc
      901 acggtttggc agctttgctc ttagaaaaat taagggcagc cgaagctgcc cttgaagtga
      961 ttgattttgc tgggttaggc cggtgacggc ttgccggggg caatgcccgg ggtgcggccg
     1021 ggttctgggc gcagcacctg ctggacgccg tcgtcaccct tattgggcgg gacgcgggcg
     1081 ggcagcggct tgccttcaat gatcagcttg agttcggcgg cgtcaaggac ttcacgctcc
     1141 agcaatgctt ctgcaatgcg ttgcagaacg tcgtggttct ccgtgatgat cttccgggca
     1201 ttgtcatagc cgtgattgat gaagcggcgg acctcggcat cgatctcgcg agccgtttct
     1261 tcgctgaagt cacggtgctg ggcgatttca cgaccaagga agatctgctc atccttcttg
     1321 ccgaaggtga gcggaccgag cttgctcatg ccccactcgc agaccatctt gcgggccagg
     1381 tcagtgccgc gctcaatgtc attgccagcg ccagtggaca tctggttgag gaagatttct
     1441 tcggcgatgc ggccgcccat gaggacggcg agctgggttt ccaggtagtc gcgggtgtag
     1501 ttgtgcttgt ccgtctccgg cagctgcatg gtcacaccca gcgccattcc gcgcgggatg
     1561 atggtgactt tatgcagtgg gtcagcatgc ggcatgagcg cggccacaat ggcgtggccg
     1621 gcttcatgga aggcggtgac cttcttctct tcttccgtga ggagcatgct cttgcgctcg
     1681 gcacccatca ggactttgtc tttggcgagt tcgaagtcat acatgagcac tgacttgcga
     1741 ttgcatcggg cagcgttcag cgccgcttca ttcaccatgt tggagagttc agcgccagag
     1801 aagccgggcg tgccgcgagc gaggatggag agatccacgt catcggccaa cgggattttg
     1861 cgggtgtgga cgcggaggat ttcttcgcga ccgcgaacgt ctggcagagg caccacaaca
     1921 cggcgatcaa aacggccggg gcgcagcagc gcgggatcca gcacgtctgg ccggttggtg
     1981 gcggcgatga ggatcacgcc ttcgttggac tcgaagccgt ccatttcgac caggagctgg
     2041 ttgagcgttt gttcgcgctc gtcgtgcccg ccgccgagac ctgcgccacg atggcggccc
     2101 acggcgtcaa tttcgtcgat gaagatgatg caaggagcgt tcttcttgcc ctgctcgaag
     2161 aggtcgcgaa cgcggctggc gccgacgccc acgaacattt ctacgaagtc cgagccggag
     2221 atgctgaaga acgggacgtt ggcttcgcca gcgaccgcgc gggcgaggag agtcttgccg
     2281 gtaccgggat ggccgaccag caggacgccc ttggggatgc gtccgccgag cttctggaat
     2341 ttttgggctt cgcgcaggaa ctcgatgatt tcacgaagct cttctttggc ttcgtcgacg
     2401 ccggccacgt ccttgaacgt gatcttcttc tgctgcatgg agagcaggcg agcgcggctc
     2461 ttgccgaagc tcagcgcctt gttgccgccg gtctgcatct ggcggatcat cacgaaccag
     2521 agcacgccga tcaaaagcag tggtgaaaat tggatgagaa gcatcggcca gttggagccg
     2581 gaaccgtctt tgaaagtgac cttggtggcc ttgttggcgt ccagggcctt gagcatctca
     2641 ggattgtttg tggggacgta ggcgcggaaa ttggttttgc cgtccacggg cgtgttgtac
     2701 tcgccgcggg ccagattgcc ttcgatctcc accttcttca cgttgttctg gccgaccgcg
     2761 ttcgtgaaat ccgtgtagga gatttccgcc tcttttgcgc cggagctgcc atgctggatc
     2821 aaattccata gcacgacccc cactaaaagt aagaccaccc ataaaataac ggtcttgaat
     2881 gttgagttca ctcggtactc ctaatttctt tcagatctgc ttcggctgga aacagacctc
     2941 tttccgatct gtacgtttat aaagacgttt tggaacggaa aaatgttcgc gaaagcgaaa
     3001 tcgtcttaaa gctcagactg aagcccgtcc aacaacttag atgcgtggcc ggccgcattg
     3061 gctctaaaac ttcgccattt caacaattct ataccccttt gcaacgcccc gcaggccgta
     3121 aaaccgctta gccctgccca aaggtgtatt aagactcagc agcgacgtac ggcaggttcc
     3181 ggccaatatg gggtgctccc aacccatagc ctacgacaaa ttgatcgctg atcagaaaac
     3241 caaagtaatc gggctgcagt gacacccggc gcgccgattg cttgtccaag agtacggcca
     3301 atttcaccgt gcgtgccccc cgggccatca ggtttcgaat caggaactct gtggtcaccc
     3361 cggattgcac caggctttcg acaagcagca cgtcctggcc cttcacgtcc agctccggac
     3421 tataaaagat ctcagccgtc cccgtagcag actccgtgaa tgcccccctc acaaactggc
     3481 agaccaccgg caggtcgagc gcgcggagca gatccgcggt aaagataaac gcgttttcca
     3541 gcacgcccac cacatggagc gtttttccct gatagtcggc cgagatttgc cgggctattt
     3601 cgcgcacccg ctgctgaatt tgctcggcgg aaaagagtac cttcggatac tgctgtgaga
     3661 ggctgttgct cacatttttt tctcggaatt ggattctcgt tcctcgatca gcacagctgt
     3721 cccggcccgg aaggcaaatt cccccgccac aggaaatcct cgcatccata cgatctggtc
     3781 gccgctctcc accaccggcc acaacagccg ttcactcccc gaaagcggcc ggcccagacg
     3841 gccaggttgg agtaactcct ttattttcct cggagactgc gtatgtgcgg ggaaaaagcg
     3901 gtcgcccgca cgccaatttc tgaccgttac ctccggtcca agcagggcac cgtttaacag
     3961 cgttgcggga ttatagcgcg aaagctcggc ctcaccagac ggaataacgc tggccttgaa
     4021 agacgtacct aactcggaaa cctcgacctc tcccgggatg gggagctgaa ctgagtaatc
     4081 ctggaccgca gcctcggatt tcaggtcagt ctctggtgcg aactggagtt cgcggaaggt
     4141 ccggatggca accagcctcc cgggcaagac cagcttctta cccgctttac catccgccag
     4201 ggcaagcagt tggcggatgt gcttaaactc caaagcgcag cccagcctat ggcccatgtg
     4261 tgaaagcatc tgcatctgga acgccggatg cagtgcacgc aaagtctgca ggtcgagtga
     4321 ccagacatta gcgccagcac cgctggccgc acgtccgctg cgcgtcggct taccctgctt
     4381 cagcagctgc ggagtcattg catccagctg ctttgtccaa tagtcagcct cgatcgcgga
     4441 catctgggcg agatcagcca aggtctgccg gacattcgga ttgaaatcgc gctcgagaag
     4501 cggcagaaga tcatggcgta cgcgatttcg agtatgtgtt cggtcctgat tgctcaggtc
     4561 ttcgcgccac ggctggttca actcgcgcag atatgactca atttcagcgc gcgaggtttc
     4621 cagcaatggc cggatcaacg atttctcgcg atgccacggc gcaatcccgg ccagtccgcg
     4681 tattcctgta cctcgcagga cccgcatcaa cacggtctct gcctgatcat caagcgtgtg
     4741 cgctgtggca atcttgtggg ctttgcctga tttgatcagc tcagtaaacc atgcgtggcg
     4801 cagttcgcga gcagccgttt ccaggctcag cttgcgttca cctgcataaa ccggtgcatc
     4861 gcctcgcccc acctgcaagt caaggtcgaa ctgccgcgca agcgctgaga cgaactcgca
     4921 atcctcatct gcttcttctc cgcggattcc atgatgaaaa tgcgcgaccg agatcaccac
     4981 gccgagctct ccacgcagct ccagcagcgc gcgaagaagc gccaccgaat cggcgccgcc
     5041 cgagcaggcc acagctacgc gctcgccggc acgaagcagg ccgtggccgg ccaccgatct
     5101 cctgaccttc tcgatcactt tgtaataata aagctcctta tccggagcac cacgatacga
     5161 caacgcgtac ccatcctgag ctactgccca ccgtggaatt ggtgtcatat caaccttctt
     5221 atctgccgct gttcattgaa tggcgcaacc agcctctttc aattcgtcac aatccgctgg
     5281 agtcccgaag agcagaagag attgcccacc tgctcggcgc cgaaggcaca aaccttgccg
     5341 cgctggaaag attcgccaac tatcgctggt ttgtggtcct gaatggagag ccggtcggca
     5401 ccgtgtcgct gaaaaatatc agccactcca tgggctacgc cgaaatcggg tacggaatag
     5461 cacaaagtca ccatggaaaa gggattgcca ctacagcggt ggggctgctg gttgagaaag
     5521 ttttccggga gaccccactg cgcaggttga tggctttcgt gcacgttgag aaccaggctt
     5581 cgcgccgagt tttgcagaat ctgggcttcc gcgaggaagg gttgctgcgg gagcattacg
     5641 tgattcaaaa ccagccggta gacgaggtct tgtacggttt gctcaggcgc gaatggaagt
     5701 cgcacccgcg caaagcccgg ccgggccgat gagcgtggct gtcagcgcca ccacgcggaa
     5761 gttgttatac ttcaatccct tgtgaaggtg atcgtcatca ttcccgctgc aggactcggc
     5821 acccgcatgg cgccccccgg caagggcgta ccttccaagc agtttttcga aatcgccgga
     5881 acacccatcc tggtgcacac actccgctgc ttcgcttcgc acccgcaggt taccgatatt
     5941 gtgattgcgc tccggcaaaa tgaaatggag cagtgccacc agcggctggc caaagatggt
     6001 cttgatcaaa aagttgtgat ggtggaaggc ggcgagcatc gccaggattc cgtcagtaat
     6061 gctctggcat ctctgaaggc cgccgaagat gacattgtgc tggttcacga cgcggtgcgg
     6121 ccgttcgtag atagcgagat catctccagc gtgattcagg aagtgcaaaa gcatggcgct
     6181 gccattgctg gtcttcccgc cgttgacaca atcaaacagg tggaacgcgc ggctgaagga
     6241 gcgatcatta cttctaccat cccgcgcgaa cgtgtcgtcc aggcgcaaac accacagggt
     6301 ttccggtatg agctgatcaa gcgagcattt gactccgcag caaccgatgg ctacgtcgga
     6361 accgacgaag cttccctggt ggaacgcctg ggtgaaagcg tgtgggtagt gatgggctcg
     6421 ccgaggaata tcaagatcac cacgccgggg gatatggaat tggcagagtt cctgctgcaa
     6481 agtaaatctc accactgatt ttcactgatg acactgatct gaaaggtgat tcatgggagt
     6541 ctcagaaggc tacattcatt ccgaattaac ggatcagatc ctggctgtgt tttatgacgt
     6601 atacaacgaa ctcggctttg gcttcctcga atcggtgtac cggaatgcgc tgcgcttcgc
     6661 gctgacccag aagggactcg cgattgagca ggaagttccc gtatcggtgg tttttcgcgg
     6721 ccagagcgtg ggtgacttca gggctgactt ggtagtgaat gggatcgtcc tgctggagct
     6781 caaaactgcg gacgcaattg tcagagcgca cgaagcgcaa gtcatcaatt atctccgcgc
     6841 cacatcgctt gagctgggtc tcatattgaa ttttggtcca aagccacagg tccgcaggtt
     6901 gttactcgac aacgtggaaa agcgcaaata ctcacgtgtc ctcggagcct ccaattgaat
     6961 ttattcagat cagtgttatc agtgaaaatc agtggtgaga aatgagaatt ggttatgcat
     7021 ttgactcgca tgagtttcgc gagagcgtcc ccctgaaaat cggcggaatt tccattcccc
     7081 acaacaaggg cctggccggc cattctgatg gtgacgtcct cctccacgca atcacggacg
     7141 cgctgctcgg tgccattgcc gcaggcgata tcgggacatt ctttccgcct accgatccca
     7201 agtggaaagg cgccgattca gccatcttta ttgccgctgc gttgaaacag gtcaaagccg
     7261 ctggatacaa gatcaccaac gtggactcta cgttgattct ggcctcgcca aagattgttc
     7321 cccacaacaa aagcattcaa aagcgagttg cggagctact cgggatcagt ccggatcagg
     7381 taggaatcaa agcaaaaaca ccagaaggtc tcggcacaga gaacaccgcg atcgcccatg
     7441 tggtggtgct gctggagaga gcctaacggc tcggcaaaga caagctgcct gaagcttgtg
     7501 ctctatcccc gagcaagcga agcggctcac gtcattcata ctcaatcatc aattttggca
     7561 atttcggcga tcctggcact tccacgaaac ccttggcact caagcatgtc cgacaccaca
     7621 ggaatgctcg ctcctagggg agtctgaggc ttgttccccg ccagaatagc tgctaacctt
     7681 cttcttctcc aactgtctct tctcggcggt gcctatgaaa aaatccctgc tcacatccat
     7741 gttctgcgct ttcgttctca tgctcgctgc cggtacggcc ggcgcttccg gaccgcttct
     7801 tctgcagaag cccacattgt ccaaaaccca gatcgccttt gcttacgcag gtgatctctg
     7861 gatcgtttcc cgcgacggcg gccaggcccg gctgctcacc agcggagccg gtactaagag
     7921 cgatccaatc ttctcgcccg atggttccat gatcgccttc accggcgact atgacggcaa
     7981 cgtggatgtc tacgtaatgc ccgccaatgg cggtatgccc aagcggctta cccaccaccc
     8041 cggcatcgat gaagtgcttg gctggacgcc cgacggcaag cagattctct tccgctctgg
     8101 ccgcaacagc tactcgcgct tcaaccgcct gttcaccgtg tcgccagagg gtgggctgcc
     8161 gcatgagtta cccctgccaa tgggtgaagc aggatcgtat tccgctgatg gtaagtccat
     8221 tgcttacgtc cccacggaca acaaccgccg gctctctgcc atcggctgga agcggtatcg
     8281 cggcggcaag gcttcccata tatggattgc gaatctgtcc agttacgaga ttgagaaagt
     8341 cccgcgcgat gtctccaatg acggcaaccc gatgtgggtt ggcagcaaga tttacttcct
     8401 ctctgatcgc aatggtccgg tcagcatgta tgcgtatgac ctgaagagca agaaggtcga
     8461 gaacgttctc gcctcagata acgacatcaa gtcagcctca gcaggtcccg gcgcaattgt
     8521 tttcgagcag tttggctcac tcagcctgct cgatcttgca accggcaaac cgaagcacct
     8581 ggaaatcagc gtccccgctg atcttcccaa ggtgatgccg cacttcaaga aggtagagga
     8641 tgagatcgcc gcagctgaca tctcgcccag cggcgcgcga gctgtctttg aagcgcatgg
     8701 tgaaatcctg accgcgccgg cagaaaaggg cgacgtccgc aacttgacca acacgcccgg
     8761 cgtcatggag cgtgatccgg cgtggtcgcc cgacggtaaa tccatcgcct acttctctga
     8821 tgaaaccggc gaataccagc tccacataaa gagccctgac ggactcggcg aagcgaagaa
     8881 gatctcgctc ggctcacccg cctcgttcta ctacaacccg gtctggtcgc cagacagcaa
     8941 gaagatcgcc tacaccgata agcggctgaa catgtggtac gtggatctgg ccaagggcac
     9001 gccggtgaag gtggattcca ccacttacga tctgccgcag cgcaccttgg ttccggtgtg
     9061 gtcgccggac agccgctgga tcgcctataa caagcagctt cccagccaca tgcacgccat
     9121 ctttgcctac tcgctggagc agagcaaggc gctccagctc actgacggcc tgagcgacgc
     9181 gcgctttccc gctttcgacc agaaaggtca atatctctat ttcaccgcca gcacagatgt
     9241 gggaccgacc accggctggc ttgatctttc cagcatcaac cgtccggtca cgcgcagcgc
     9301 ttatctgatc gtgttgcaga aagataagcc atcgccgctg gctccggaaa gcgacgaaga
     9361 gaaggctgcc agtgatgaca gcaagccaga cacggacaaa tcggcgaagt cggaagagaa
     9421 atctgaccag gagccgatga atccggagga aaaagccaaa gccgctgatg ccaagccggc
     9481 gaaagctgcc aaagccgaag ccgtgacagt gaagatagat cccgaaggca tcagccagcg
     9541 cattgtggcc atgccgattc ccccccgcag ttatgtgcaa ctggtggcgg gaaaagcagg
     9601 caccatcttt ctggtagaag gccccgcacg gatcgcgccc gacgcgcaaa ccacgctgtg
     9661 gcgctttgat ctgacatctc gcaaaccgga aaaaatcacc gagggcgtaa acagcttcaa
     9721 cgtctccttc gatggtaaga agatgcttta cgccaaaggc cggggcagga accagcactg
     9781 gttcatcgct tctgcggccg cgccagccgc gggcaacggg ccagccgctg ccggcaagcc
     9841 ggacacaccg ctgaaactcg agcgcatgga ggtcatgatt gatccccgcg cggagtggaa
     9901 gcaggagtac aacgaggtct ggcgcattga gcgcgacttc ttctatgacc ccaacctgca
     9961 cgggctgaac ctgcaggcca ccagcaagca ctacgagccg tacctggaga acattggcag
    10021 ccgctacgat ttcagctatc tgctggcgga gatgctgggt gaactcacgg ttggtcacat
    10081 gtacatccgc acgccgctcg atccgccgag cgacgaaggc aaagtcgggc tgttgggcgc
    10141 cgactacacc attgaaaacg ggcgttatcg cttctcccat atctatgagg gcgagaactg
    10201 gaacccgcag cttcgcgcgc cgctcacgca gccgggtgtg aacgtgcagc aaggtgaata
    10261 cctgcttgcg gtgaacggcc gtgacctcaa gggcagtgac gagatctttg ccctgttcgc
    10321 cgggactgcc gacaaatcta ccgtcctgcg cgttggctct tctccggatg ggaagggcgc
    10381 gcacaacgtg agcgtcgtcc ccattgaaag cgaaaccgcg ctgcgcaacc gtgcatggat
    10441 ttacggcaac ctggaaaaag tcgagaagac gaccaatggc cgggtggcct acgtctacct
    10501 gccggacacc ggcttcggcg gctacacctc ctttaaccgc tacttctttg ctcaggtcgg
    10561 gcgcgatggc gcggtgatcg atgagcgctt caacggcggc ggttccgcag ccgattacgt
    10621 gatcgactac ctgcgccgtc cgctagcaaa ttactggatg acccgtgaag gccaggattt
    10681 caccacacct gtcggtgcaa tcttcggacc caaagcgatg atcatcaacc aattcgccgg
    10741 ctcgggtggc gacgcgctgc cctggtactt ccgcgatgcc aagctcggtc ctctcgtcgg
    10801 cacccgcaca tggggtggcc tggtgggaat ctacgactat ccgcagctca tggatggtgg
    10861 cggcgttacc gcgccgcgcg tggctttcta caaccgcgat ggccagtggg acgtagagaa
    10921 ccacggcgtg gctcccgata ttgaagtcga gatcaccccg aaagactgga tgaccggccg
    10981 cgatcctcag cttgataaag cggtcgctgc ggtgatggat ggcttgaaga agaatccgct
    11041 accggtggcg aaacgcccca cgttccccaa ttaccacggc aagcccagcc agggtatgcc
    11101 agcagcaggg ggaagcggag gctcaggcaa gcggtaagca caactcaccc taaacaaggg
    11161 cgcgctgaca ggttgtcagc gcgcttttct gttaggattt cctaatttct ccaattccgc
    11221 cgcggtaaag agtcttcttt tccctaagta tttccaggaa attaggcacg ggatattcgg
    11281 aatatccagc ctgtggccaa ataatcgcca agcagcaatc ctattttgcg cagtttgcgc
    11341 aaagttaagt tgaaaatctt atgccacacc cgcattatat ccgcacttcg gcgtgtgacg
    11401 tctgcatgcc attcccagac aatttccgga aaggttctcc caatgagaaa gctagtgctc
    11461 tctttggttt tggtggtctc agcattcttc cttggaagtt gcggctcggt gcaagctgcc
    11521 gcgagcctgg cgcaacaggt cagcctgggc ggcattgtga atctgcccgc cggaacaatc
    11581 actttggatt gttcaagcca gttcagcatc gccaggggaa ccattgttca ggggcagggc
    11641 aggggcgtca ccatcatcaa tgacgtgtgc ccgagcggta acactttcac cgtcgatctc
    11701 tccgctcccg gaaccgcggt gaagattcag gatcttaccg taactcacaa cacggccact
    11761 ggcacggtat tgagcatctc cggcagcgga ggcaaacaga gtcccgcgcc cacggtggtg
    11821 gtttccagcg tcgacttcag ccaggcgcaa aactgcattg tcaccacggg gctgaacctc
    11881 ttcttccttg aaaagagcat tgtccggggc tgcggcggag acggcgccaa catcaattct
    11941 ttcggcgtga cactgcacga caattggttc gaattcaacc aggggaacgg cgtctcgttt
    12001 gtcggctccg ggttctgcgc ttcgtgcttc ggtaacgagt acaactccaa tgctggccac
    12061 ggctttatct acaacaattc tgatggcgcg gatggccgcc atacgaacga atatgtggac
    12121 tcaaatggcg atgtgggagt tgtggtgcac ggtgcacgcg atttcacctt caacaatgga
    12181 tgggtgggca gcaatcgcgg cggtggaatg gtcatcggcg atacggaaat aggtacctcc
    12241 cttgtcggga acacgttcac caacaacttt ggcccgaatt taatcgtgga gcagaggagc
    12301 tctccgctca ggctttccgg caatcttagt tcgaaccccc acgacccctg cgactcagag
    12361 atcaacggca ggtgcacaag catgaaccag tgaggcgatg cgtaaccagt ccggaatgaa
    12421 caatgaaatc tgacgcgatt tggggctaca atgctccggc atgaggccta ccctcgtcgt
    12481 ggtcctcgcc ttgatatttg ccgggctggc cgctcccgct tcaggcgtcg tcacctttcc
    12541 tagcggcagt ctcacgctgc acggcgtcct ctacaagccc gcaggaaaag gtccatttcc
    12601 agcagtgctc ttcaaccatg gcagtgcgcc cggcatgtac agccaggaag cgtttgattc
    12661 catcgcgcct ctgttcaccc aggcaggctg gatcttcttt gcaccgtggc ggcgcggcca
    12721 gggtttgagc gcaaacgcag gtccgtacat aggcgatcag attacgcaat caatgaccga
    12781 aggcggcata cccgcggctt ccgccacaat ggtccacctg cttgagacac agcatctgca
    12841 ggaccagctc gccggccttg cctggctgcg caagcagtcg tttgttgatg ctaaaaggat
    12901 cgccgtagcc gggaattctt tcggcggcat tgagacgctt ctaggcgcgg agaaagaaag
    12961 ctactgcgcg gccgtggaca ttgccggcgg cgcggagagc tggaagtatg cgcctcagct
    13021 tcagtcctcc ctgattcgcg cggctacgca cgcccaagcg cccgttttgt ttgtgcaggc
    13081 ggagaatgac tacgatctcg cgccgagcaa cgtcctgagc gaagccgctc gcaaatccgg
    13141 caaaactgtg gaggtaaaga tctatccgcc tttcgggaag acggccgagg acggacacag
    13201 catcagctac agaggcgcct cgatctggca gccggatgca ttgagatttc tggagaggaa
    13261 ctgcagagcg cactagagtc catcactcct aaatgactca attgggtcag acgctttgta
    13321 gcacaggcgc cctcgcctgt gccggtttac actcccgatg aacgtgggtg ctcaacacca
    13381 caacggaatc cagttggtac cgcctgccgc cgttcgacac agattggcca gggaccagcc
    13441 acttcgcctc atcattcaag gtcaggtcga aagtgatgaa gtacgaagtg ccaactttct
    13501 caatgtgcgg caatttgcgg cggcagattg ttcattccgc ggcacaggcg aggcgcctgt
    13561 gctacacagt taacaaaggc tatgtttaag atgcaagaga gaagccggcg ggggcgatca
    13621 gcggcccgaa ccagcatgag cccggttaac tgatttatga gactgctatt agtagtgcat
    13681 tgcgatccag attttaccgg cttccaccag gcagatgaaa actccgatt
//
LOCUS       DASQYP010000010         5435 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_169863, whole genome shotgun sequence.
ACCESSION   DASQYP010000010 DASQYP010000000
VERSION     DASQYP010000010.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 5435)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5435)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5435
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_169863"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..824)
                     /locus_tag="VE783_00290"
     CDS             complement(<1..824)
                     /locus_tag="VE783_00290"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX51859.1"
                     /translation="MPETIFQPEEQLADQELELSPAELLQHEWPQYPGPPLLKQKAVL
                     DRHPDLVGYAGMASMPGWSWPYAFALQILVAVAVVASLFNWFITRDAGKLHEELVQMQ
                     AATDAELDRQQGILDATQAEISRISHSSASVFHLKMSPEPLSREQALAQLNTTLADTK
                     KTFTEFKQRMQQKEKELRAAQNAKAVALSGVPLFFSLALVLCAGSVQRGIQRDYSRAK
                     FARHSGDFFLYFASTQGLLLNLAFLFLLHFGLSAASWGFADLMESLGPVFWVALSLG"
     gene            complement(933..2054)
                     /locus_tag="VE783_00295"
     CDS             complement(933..2054)
                     /locus_tag="VE783_00295"
                     /inference="COORDINATES: protein motif:HMM:NF021778.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-propeller fold lactonase family protein"
                     /protein_id="HYX51860.1"
                     /translation="MKASIVLAAVLAMAGLTGCIKGEKNFMYVTGRGTNEVFGFTLHA
                     NGTITALGTPNFATGSQPASLAVHQPGDFIYIANSAGNNLTQLNINRSNGELTIPPTN
                     SAIPPVVPPNIFGTGATPVSVVVSPTGPFVYALNQASGNISAFLLDPSTGSLSLITNP
                     PGNPSGALPTYGTFTGPVAMAVSPKGSALFVVSPSQGLFSMPIDNSKGQLGAQSTPLP
                     AGTNPSSITVESTGQFLYVTDSASNAVFAFSIGSNGALAAVAGSPFAAGAGPTASAVD
                     ATGNFLYVANKNDNTISAFLIKPDGTLSAVPGSPFASSGRGPGFVAATASFLYVADQT
                     TNDISVFSIANNGALSPVAGSPFPVPVSPEWITLQPQAQ"
     gene            complement(2216..2677)
                     /locus_tag="VE783_00300"
     CDS             complement(2216..2677)
                     /locus_tag="VE783_00300"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX51861.1"
                     /translation="MRTTARACAYLLLLAVSLGASAAAKQVAVIVDKSNTLAGMSATD
                     LAHIFRLDKNKWPNGKNVVLVLRDPSTPEMQTAIHALYHMTAEEFKALLNAHRTSFII
                     AESEQDLLKQVESIPGAVGLVDVYSLNGKVNVLKVDGKLPLEQGYVLKSSY"
     gene            complement(2775..3086)
                     /locus_tag="VE783_00305"
     CDS             complement(2775..3086)
                     /locus_tag="VE783_00305"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX51862.1"
                     /translation="MSSEVQDAALITLMHELKRFVRQSLEQPEVMNELRHWMMPAITG
                     RFGPTKATADEIIRAFELLAPGLMVDFLAENPEILNSQTLAEWAAFRDALQRTTAEAT
                     A"
     gene            3283..4254
                     /locus_tag="VE783_00310"
     CDS             3283..4254
                     /locus_tag="VE783_00310"
                     /EC_number="1.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012472.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HYX51863.1"
                     /translation="MEYTNLGTTGTKVSRICLGCMTYGAKKWREWVLEEPEGRPFIKQ
                     ALELGINFFDTADMYSQGVSEEILGRALKDFGAPREKTVIATKVFFPMGDDPNQKGLS
                     RKHIMHAIDASLRRLGTDYVDLYQIHRFDYETRIEETLEALHDVVKAGKARYVGASSM
                     YAWQFARMLYIADRLGLTRFVTMQNHWNLVYREEEREMSPLCQAEGIGMLPWSPLARG
                     LLAGNRKSGTLRSKADDYALKLYTREADDRVVDCVQELAKDRGVPPAQVALAWLLHKP
                     GVTAPIIGASKPHHLEDAVAALALKLNAQEIERLEEVYIPHPVLGHH"
     gene            complement(4285..5109)
                     /locus_tag="VE783_00315"
     CDS             complement(4285..5109)
                     /locus_tag="VE783_00315"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HYX51864.1"
                     /translation="MSIRLLFVDDEEGIRLTLSEILRRNGFEVTVAAEVREAIAAMNS
                     QTFDVLLTDLNIGQPGDGFTVVSAMRRIQPEVLCMILTGYPAFETALQAIRDQVDDYI
                     VKPADVVSLVDNIRARLVNRTKRRLLELRRAYTILQENKEEVIRRWLATMASDPDISA
                     IKVNAKGRRNHVGELIDAIVNNSANPDDGIKRGTLKAAEIHGSLRFHQGYSLPLLVRE
                     ARILQDTIGNLIQEHLLEVDISWLVPDLISIGHMIEQLLEEAIRAFLAEQTVPVAG"
BASE COUNT         1204 a         1454 c         1647 g         1130 t
ORIGIN      
        1 ccaagtgaga gcgccaccca gaatacaggc ccaaggctct ccatgaggtc agcaaatccc
       61 cagctggcgg cgctcaggcc gaagtgaagc aggaacagga aagcgaggtt aagcagcaga
      121 ccttgcgtgc tcgcgaaata caggaaaaaa tctcccgagt gccgggcaaa tttagcacgc
      181 gagtagtcac gctgaatacc acgttgaacg ctgccggcac agagcaccag cgccaggctg
      241 aagaatagcg gcacgccgga gagcgctacc gccttggcgt tttgagcggc gcgcagctct
      301 ttttctttct gctgcatgcg ctgcttaaat tccgtgaacg ttttctttgt atctgcaaga
      361 gttgtgttga gctgcgccag cgcctgttcg cggctgagcg gctccggcga catcttcagg
      421 tggaacaccg acgcagatga atgcgaaatc cggctgatct ctgcctgtgt agcgtccagg
      481 attccctgct gccggtcgag ctcggcgtca gtggctgcct gcatctgcac cagttcttca
      541 tgcagcttgc ccgcgtcgcg ggtgatgaac cagttaaata aagaggcaac aacggccacg
      601 gcgaccagaa tttgcaaagc aaatgcatac ggccagctcc aaccgggcat ggatgccatt
      661 ccggcatagc cgaccagatc aggatgccgg tcgagtacgg ccttctgttt caacagcgga
      721 gggccgggat attgaggcca ttcatgctgc aacagctcgg cgggagagag ctccagctcc
      781 tgatccgcaa gctgttcttc cggctggaaa atggtttccg gcatgatatc gcaactcttt
      841 atcacggtta ccaagcggta aacaaacacc aatggtgcaa ccgggtaaat gcacccctgg
      901 cctgactctc agaagctcgc tacccgccgt tcttactggg cttgcggctg gagcgtgatc
      961 cattcagggg aaacgggcac cggaaagggc gatccagcca ccggactcag cgcaccgttg
     1021 ttggcgatgg agaagactga aatgtcattg gtggtctggt cagcgacgta aagaaagctg
     1081 gcggtggcag ctacgaaccc cgggccgcgg ccactgctgg caaaaggcga gccaggcacg
     1141 gcggagagcg tgccatctgg cttgatcagg aaagcggaga tggtgttgtc attcttattc
     1201 gccacataaa ggaagttgcc ggtggcgtcc actgcggacg ccgtggggcc cgcgccagcg
     1261 gcgaaaggag aaccggcaac agccgcgagt gcgccgttgc taccaatgga aaacgcaaac
     1321 accgcgttgc tggcggagtc cgttacatag aggaattggc cggtagattc caccgtgatg
     1381 gaactcgggt tggtgcctgc tgggagcggt gtgctttgtg cgcctagctg gccctttgag
     1441 ttgtcgatgg gcattgaaaa caggccctga gagggactca cgacaaagag cgccgacccc
     1501 ttgggggaaa cagccatggc caccggcccc gtaaacgtgc cgtaagtggg taaggctccg
     1561 gatggattgc ccggcggatt ggtgatgagg gagagagagc cggtggaggg gtccagcaga
     1621 aaagctgata tgttgccaga ggcctggttc agggcgtaaa caaacggccc cgtgggcgag
     1681 acaaccaccg aaactggagt ggctccggtg ccaaagatat tgggaggcac aaccggcgga
     1741 atggcgctgt tggtgggcgg aatggtgagt tcgccattgc tgcggttaat gttgagctga
     1801 gtgagattgt ttccggccga gttggcgata tagatgaagt caccaggctg atgaaccgcg
     1861 agtgaggcag gctgagagcc ggttgcgaag tttggagtgc ccagagccgt gatggtcccg
     1921 ttggcatgca gagtaaagcc aaacacctca ttggttcccc tgccggtcac atacatgaaa
     1981 ttcttctcgc ccttgatgca cccggtcagt ccggccatgg ccagaacggc ggccagaaca
     2041 atactcgcct tcatgctttc tcctcagatt tgccgcagaa ataatgctta tgaggataaa
     2101 tgacgccccg cgtaatcagc aatcgtgagc aggcggaggg cgcaattatt cccagagaag
     2161 aacgccggat acatgacttt cttgccgaaa gagattttcg cagccagaag aaggactagt
     2221 agctgctttt gagaacgtaa ccctgctcga gcggaagttt cccgtccact ttcaagacgt
     2281 tcaccttgcc gttgagggaa tacacgtcaa cgaggccgac cgcgccggga atggattcca
     2341 cttgcttcag caggtcctgt tccgattcag caatgataaa gctggtgcga tgtgcgttga
     2401 gcagcgcttt gaattcttcc gccgtcatgt ggtagagcgc gtggatggcg gtctgcattt
     2461 ccggcgtgga tggatcacgc agcaccagca caacattctt gccgttgggc catttgttct
     2521 tgtcgagacg gaagatatgg gcgagatcgg tggcgctcat gccggccagc gtattgctct
     2581 tatccacaat gacggcgact tgctttgccg cggcggaggc gccaagagac accgcgagca
     2641 gaaggagata agcacatgcc cgggcggtgg tcctcatgaa ggggagttta ttccggaaaa
     2701 cggaacaaga acaagttacc ggggtaatat gtcctttctt tccagaacct tagcctgctc
     2761 ttagggctcg caacttaagc cgtggcctca gccgttgtcc gctgaagagc atcgcggaag
     2821 gccgcccatt cggcaagcgt ctgcgagttg agaatctccg ggttttccgc taggaaatcc
     2881 accatgaggc ctggcgccag cagttcaaaa gcgcggatga tctcgtccgc agtagctttg
     2941 gttggaccaa agcggccggt gatggcgggc atcatccagt ggcgcagttc attcatgacc
     3001 tcgggctgtt cgaggctctg cctgacaaat cgtttgagct cgtgcatcaa tgtgatgaga
     3061 gcagcatcct gtacttcgct tgacatacca cagctcccaa agggggattg ggcacctatc
     3121 ttgttgagaa gagtctctct cactggcgtt atgaacaaat tagagccgaa ttagagtacc
     3181 taatccttta tttgcaacct gataggaaga gacttgcagt ttttcgggca cgctgggggc
     3241 ccatggcgag ccaggccggg catcatctat cctattgacg ccatggaata taccaatctg
     3301 ggtaccaccg gaaccaaagt ctcccggatc tgcctgggat gcatgaccta cggcgcgaag
     3361 aaatggcgcg agtgggtgct ggaagaaccc gagggccgac catttatcaa acaagccctt
     3421 gaattgggga tcaatttctt tgataccgcg gacatgtatt cccagggcgt gagtgaggaa
     3481 atcctgggcc gcgcgctgaa agactttggc gcgccgcggg aaaagacggt gatcgccacc
     3541 aaggtgttct tccccatggg cgatgatccg aaccagaaag ggctctcgcg caagcacatt
     3601 atgcacgcga ttgacgccag cctgcggcgg cttggcacgg actacgttga cctgtatcag
     3661 atccatcgtt tcgactacga aacgcggatc gaagagacac ttgaggcgct gcatgacgtg
     3721 gtgaaggcgg gaaaagcgcg gtacgtcgga gcctcgtcaa tgtatgcgtg gcaatttgcc
     3781 cgcatgctct acatcgctga ccggctcggg ctcacgcgat tcgtgactat gcagaaccac
     3841 tggaacctgg tgtatcgcga agaagaacgc gagatgtctc cgctgtgcca ggcggaaggt
     3901 attgggatgc tgccgtggag tccgttggcg cgagggctgc tagcgggaaa tcgcaagagc
     3961 gggacgttgc gatcaaaagc ggacgattac gcactcaagc tctacacccg tgaggccgat
     4021 gatcgcgtgg tggactgcgt tcaggaactg gccaaagacc gcggcgtgcc gcccgcgcag
     4081 gtggcgctag cctggctgct gcacaagcct ggagtgacgg cgccgatcat tggcgcgtca
     4141 aagccgcacc atctggaaga tgccgtggct gcactggcac tgaagctgaa cgcgcaggaa
     4201 attgaaagac tggaagaagt gtatatcccg catcctgtgc tgggacacca ctgattcggg
     4261 cacagcactg aacacctttt actgctaacc ggctacgggc actgtttgct cggcgagaaa
     4321 cgcgcggatg gcctcttcca ggagctgctc gatcatgtgt ccaatggaaa tcaggtcagg
     4381 aaccagccag cttatgtcga cctcaagcag gtgctcctga atgagatttc caattgtgtc
     4441 ctgcaatatt cttgcttcgc gcaccagcag cgggagcgaa tagccctggt gaaagcgcag
     4501 gctgccgtgg atctccgccg ctttgagcgt gccgcgcttg atgccgtcat cgggatttgc
     4561 cgagttattc acgatggcat caatcagttc gccaacatgg ttgcggcggc cctttgcatt
     4621 caccttgatc gcggatatat ccgggtcaga cgccatggtt gcaagccagc gccggatcac
     4681 ttcttccttg ttctcctgca ggatggtata agcgcggcgc agttccagaa gacgccgctt
     4741 ggtacgattc accagccggg cgcggatgtt atccacaagg ctgaccacat ctgcgggttt
     4801 tacgatgtag tcatccacct ggtcgcgaat ggcctgcagc gcggtttcaa atgcgggata
     4861 gccggtgagg atcatgcaga gaacttccgg ctggatgcgg cgcatggcgc tgactacggt
     4921 gaaaccgtct cccggctggc cgatgttcag gtcagtcagc agaacgtcaa acgtctgcga
     4981 gttcatggca gcaatggctt cacggacttc agctgccacc gtcacttcaa agccgttgcg
     5041 ccggagtatc tctgagagag tgagccgaat accctcttca tcgtcaacaa acaataaacg
     5101 gatgctcatc ctgcggggga ccttctccag ctgaatttat gcgcacactg agcgcgcttg
     5161 tggcccgagg ttataacgta cacagttgcg agcggttcag gtcctgcgtg atgagtcaac
     5221 cagtggcagt ggcgcgatgg tgatgcaggc ccgccgattt ctttttccga ttccaaattc
     5281 tcagatgctc atgcgggcga aaagcgttgt tttttgccct atttttgccc gtttgtgtcc
     5341 gccttgcggc caaggtaccg tgcgcaaacg tcactgagac ttgaggttga atgaacagcg
     5401 ccctgagcgg caagtcgatc cgctgacagg gcgct
//
LOCUS       DASQYP010000011         6148 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_21454, whole genome shotgun sequence.
ACCESSION   DASQYP010000011 DASQYP010000000
VERSION     DASQYP010000011.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 6148)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6148)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6148
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_21454"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1416
                     /locus_tag="VE783_00320"
     CDS             <1..1416
                     /locus_tag="VE783_00320"
                     /inference="COORDINATES: protein motif:HMM:NF013508.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX51865.1"
                     /translation="NVTGVAAGVQNNTTGPISSTQSGAGATSNTASITVIGPPSIAKA
                     FGAASINLNAGSTLSFTITNPNATVALTGVAFGDTLPTGLAVANPNGLTGSCGAGTIT
                     TGTVSGFSVVNLSGGTIAAGGSCTFSVNVVGTTGGHKVNTTGTVTSSNAGSGNQATAT
                     IDVLAPDLTITKTNPQSFKRGQTGAQYTITVSNVGFGPTTGTVTVVDTLPNIQNPPVP
                     TAISGTGWTCTLATLTCTRADALPSGSAYPVITLTVNIPKNITNTFTNTVTVSGGGDV
                     NPNNNTATDTVTVNPPVSMTSQSASVTVVAGGTGTMPISVDMADPTVGVIAFSCSGMP
                     VASSCSFNPTSMDPAALASPANLTVSMSTTRGTAALITPRRPGSHRELPVVAMLSLPI
                     VGVMLAGVSAPSLKNAKRWALLLLLCLMLLMVIGCGVAPDTKAQTPPPVVGTPAGTYP
                     ITVTGTSTGFTATATFNLVVQ"
     gene            1502..2002
                     /locus_tag="VE783_00325"
     CDS             1502..2002
                     /locus_tag="VE783_00325"
                     /inference="COORDINATES: protein motif:HMM:NF019126.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail fiber protein"
                     /protein_id="HYX51866.1"
                     /translation="MGTPYVGEIRMFAGNFAPVGWAFCNGATLAISENDVLFNLIGTT
                     YGGDGQNTFNLPNLASRVPVHVGPGFVIGQSGGVESVTLTTSQIPAHSHVPLCNSGAG
                     TNASPQNDVWAALDSNVYSDAAPSVTMAAQALGSAGGSQPHDNMVPFLCINFIISLFG
                     IFPSQT"
     gene            2088..2585
                     /locus_tag="VE783_00330"
     CDS             2088..2585
                     /locus_tag="VE783_00330"
                     /inference="COORDINATES: protein motif:HMM:NF019126.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail fiber protein"
                     /protein_id="HYX51867.1"
                     /translation="MSTPFLSEIKIVSFNFPPKGWALCNGQLLPINQNQALFSLLGTT
                     YGGDGRVNFALPNLQGRIPNHVGNGFTLGERGGETSHTLNLSETPAHNHVPSGSTATP
                     NAASASGNLWATGNALLYAPTSNSSMNPAGISAAGGSQPHENMSPYLVLNFIIALQGI
                     FPSQN"
     gene            2602..3123
                     /locus_tag="VE783_00335"
     CDS             2602..3123
                     /locus_tag="VE783_00335"
                     /inference="COORDINATES: protein motif:HMM:NF019126.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail fiber protein"
                     /protein_id="HYX51868.1"
                     /translation="MSDQFVAEIRIFPFNFAPKGWALCDGQLLPISQNTALFSLLGTT
                     YGGDGKSTFALPDMQGNSPMQQGQGPGLSLRDLGEVAGEQNVTLLQTEMPAHTHSVNA
                     GATPDQLTPVNNVWASGQKGFGSFYVAPPANAPMNPLATSIAGGSLPHNNMMPYLTLS
                     FCIALQGIFPARS"
     gene            3185..4771
                     /locus_tag="VE783_00340"
     CDS             3185..4771
                     /locus_tag="VE783_00340"
                     /inference="COORDINATES: protein motif:HMM:NF014673.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HYX51869.1"
                     /translation="MSQESTRLESAPSAQTQTVLESGVALSRSLIWGMQRQFYAERGL
                     SAWTADQVPSYITNNPFIAEIYAQIIAAFIEDCLSPDGNGTPTEKPLHVVELGAGTGK
                     FSWLLLRRLTALLEERNTRPGLLRYCMTESAESQVIAWRDNSYLAEFVDRGLLGFGTF
                     QAGGAGGFSLSSATKGPVAVVANYVFDSLPQDAFAVENGQLSEFLLTTSSEGEPRSFR
                     DLRFSFEKAGTCSSRYSDVNWNSILERYRAHLPAATVLFPAVALQTLSTLSEMSDGRM
                     LVLAADKGFTREEDLALLRGDPQFEFHAGNCCFSQVVNFDAIAKYFRARGGHALLPAK
                     HVSSLQLCAFFEHPAKQDFSATCKAYANAARPFGPDDLFALMSWLNAQLDEIPLPQAL
                     SLLRLTSWDTHAFNRMFPAIARHARQAILERQDLRQAVLNTWANHYPLCHEDNVLAFH
                     CGVVLLELRFFAEAYEMFRKSQQLFGPSATTSYNLGLCCLGLNQQDQALGLMREACAL
                     DPNFEAARQSRLKLENPVQS"
     gene            4768..5265
                     /locus_tag="VE783_00345"
     CDS             4768..5265
                     /locus_tag="VE783_00345"
                     /inference="COORDINATES: protein motif:HMM:NF024698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HYX51870.1"
                     /translation="MKTELRLAVPEDRDFLFQLYSSTRMQEIAPFGWPAAQQGAFLRM
                     QFNAQQSWYETAYAAAEQKIIEIDGSPIGRIMVVREPNAWLLIDISLLPELRGRGVGT
                     ELMQSLIRDCAAAGAVLRLQVLRVNPAQRLYKRLGFAVTGEDPIYLQMELRPASDAES
                     QAARP"
     gene            5275..5454
                     /locus_tag="VE783_00350"
     CDS             5275..5454
                     /locus_tag="VE783_00350"
                     /inference="COORDINATES: protein motif:HMM:NF025614.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CPXCG motif-containing cysteine-rich protein"
                     /protein_id="HYX51871.1"
                     /translation="MLSGFQCAGCGEWNETNVDASAGRRQSYVEDCQVCCKPNVLQVW
                     WDGDENEYVITAELE"
     gene            5544..>6148
                     /locus_tag="VE783_00355"
     CDS             5544..>6148
                     /locus_tag="VE783_00355"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX51872.1"
                     /translation="MPDNPAGNAPQFQTATYATQPAPDICKGCKQPISGMYYRANSAI
                     VCGSCADEIKRRVPADNHSAFVRAILFGLVGFAIGLTVYAAFVIMTGISIGYLALAVG
                     WIIGKAMMMGSGGIGGRRYQVTAVMLTYAAVSIAFIPIVISVMRSHKAEARLAQRAEP
                     PKAAVGSASSSAEQQASALQGTPTAEKKPAVSVGKAIGSLV"
BASE COUNT         1298 a         1813 c         1717 g         1320 t
ORIGIN      
        1 aacgtaaccg gcgtcgctgc gggagtacag aacaacacca ctggcccaat ctcctcgact
       61 cagagcggcg cgggcgcaac cagtaacacg gcttcgatca cggtgattgg tccgccttcg
      121 attgccaagg cattcggagc ggccagcatc aacctgaatg cgggcagcac gctgagcttc
      181 acgatcacga accccaacgc gacagtcgca ctgactggcg tagcattcgg ggacacattg
      241 cctacaggcc tggcagtggc aaacccgaac ggactgaccg gctcgtgcgg cgcgggcacg
      301 attaccaccg ggactgtttc cggcttctcg gtcgtcaacc tctccggcgg gacgattgcc
      361 gccggtggct cctgcacctt ctcagtgaat gtggttggga caaccggcgg tcacaaagtg
      421 aataccactg gaacggtgac ctccagcaac gcaggttccg gcaaccaagc cacggcgacc
      481 atcgacgtcc tggctccgga tctcacgatc accaaaacca atccgcagtc gtttaaacgc
      541 ggccagacgg gcgcacagta cacgattact gtgagcaatg ttggctttgg gccgacgacc
      601 ggcacggtga cggttgttga tactctgccc aatatccaga acccgccggt tcctaccgct
      661 atcagtggaa cgggctggac ctgcacgctg gcaacgctca cctgcacgcg cgcggacgct
      721 ttgccttccg gcagcgctta tccggtgatc acgctgacgg taaacattcc caagaacatt
      781 acaaacacat ttaccaatac ggtcacagtt tccggcggcg gagatgtgaa cccgaacaac
      841 aacacggcga ctgacacagt tactgtcaac ccgccagtct cgatgacttc tcaatccgcc
      901 agcgtaaccg tggttgcggg tggaaccggt accatgccga tcagcgtcga tatggccgat
      961 cccactgttg gagtcatcgc cttcagctgc agcggtatgc cagtggcatc aagctgcagc
     1021 ttcaacccga cgtccatgga tccggcggct ctggccagcc cggcgaacct gacagtttcc
     1081 atgtctacga ccagaggaac ggccgctctg attacgccac ggcgtccggg ctctcaccgc
     1141 gagcttccgg ttgtggcgat gttgtctctg cccatcgtgg gcgtgatgct ggctggagtc
     1201 agcgctcctt ccctaaaaaa tgcaaagcga tgggcgctgc tgctcctgct ttgcctcatg
     1261 ctgctcatgg taatcggctg cggagttgct cctgatacca aggcgcaaac tccaccacct
     1321 gtggtgggga cgcctgcggg cacttacccg attacagtta ccggcaccag caccggattt
     1381 accgccaccg ccactttcaa tcttgtagtt cagtagaaag cagtacagtt cgcaattccg
     1441 gcgtgctgat catcgcatgc cggaaatacc tttattgagt aaatggatag gagatacaag
     1501 gatgggaaca ccatacgttg gtgaaattcg tatgttcgcc ggtaactttg cgcctgtggg
     1561 ctgggcgttt tgtaacgggg caacgctggc gatctcagaa aatgacgttt tgttcaactt
     1621 gatcggcaca acctatgggg gcgatggaca gaacactttc aacctgccga acctcgccag
     1681 cagggtgcct gtgcatgtgg ggcccgggtt cgtgatcgga cagagcggcg gtgtggaatc
     1741 tgtgacactg accacgtcgc aaattccagc tcatagccac gtacctcttt gcaattccgg
     1801 cgcaggcacc aatgccagtc cgcaaaatga tgtgtgggcg gcgcttgaca gcaacgttta
     1861 ttccgatgcg gctcccagcg tgaccatggc ggcgcaagcc ctgggctcgg ccggcggttc
     1921 acagccgcat gacaacatgg tcccattcct ttgtatcaat ttcatcattt ccctgttcgg
     1981 gattttcccg agtcaaacat aacttcgggc agtaccgggc ccgcacgtcg gcggtaaagg
     2041 accgtcacta ctggatcggt cctgaaagta tcttcaagga gagaaggatg tcgacaccgt
     2101 ttctgtctga aatcaagatt gtgagcttca attttcctcc caagggctgg gcgctgtgca
     2161 acggacagtt gctgcctata aaccagaacc aggccctgtt ctcactgctg ggtaccacgt
     2221 acggcggcga tgggcgcgtc aacttcgccc tgccgaatct ccaggggcgc atcccaaacc
     2281 atgttggcaa tggcttcacc ctgggcgaac gcggggggga aacctcccac accttaaacc
     2341 taagtgagac gccggcgcat aaccacgtac cctccggttc cactgcgacg ccaaacgctg
     2401 ccagcgcatc aggaaatctg tgggccactg gaaatgctct gctatatgcg ccaacgtcaa
     2461 attcgagcat gaatccggcg ggcatttcag ccgccggggg cagtcagccg cacgaaaaca
     2521 tgtcacctta tctggtgctc aatttcatca tcgcccttca ggggattttc ccctcgcaaa
     2581 attagaggag aaggattagc catgtcagac cagtttgtag ctgagatcag gattttccct
     2641 tttaactttg ctccaaaagg atgggccctt tgcgatggcc aactcctgcc catcagccag
     2701 aacaccgctt tgttctcgct cttgggtacc acttacggcg gcgatggcaa aagcactttt
     2761 gccctgcccg acatgcaggg taactcgccc atgcagcagg ggcagggccc cggcctgagt
     2821 ctgcgcgatc tgggcgaagt tgccggcgaa cagaacgtta cgctgctgca gacggaaatg
     2881 cctgctcaca cgcactccgt aaacgcgggc gccacgcccg accagctcac gccggtaaac
     2941 aacgtctggg cttcaggaca aaaaggcttc ggcagctttt atgttgctcc gccagccaat
     3001 gcgccgatga accccttagc tacgtcgatt gccggcggca gtctgcctca caacaacatg
     3061 atgccgtacc ttaccctcag cttctgcatc gcgctgcagg ggatcttccc ggcacggtcc
     3121 tagtctcttt tatggggctt cagcaatgga gccccatttc tttgctctgc gctactattg
     3181 atccatgtcg caggagtcca ccaggctaga gagcgctcct tcagctcaaa cccagacggt
     3241 tcttgaatcg ggtgttgctc tttcgcgttc gctcatctgg ggcatgcaac gccagttcta
     3301 tgccgagcgc ggcctgagcg cctggactgc cgatcaagta cccagctata tcaccaataa
     3361 tccgtttatc gcagaaatct acgcacagat cattgcagcc tttattgaag attgcctttc
     3421 tcctgatggg aatggcactc ctaccgagaa gcctctccac gtggtcgaac ttggcgcagg
     3481 caccggtaag ttttcctggc tgctgctgcg cagactcacg gcgttgcttg aagagcggaa
     3541 cacccggccc gggctcctgc ggtactgcat gacggagtcg gcggaaagcc aggttatagc
     3601 ctggcgcgac aacagctatc ttgccgagtt cgtagatcgt ggcctgctgg gattcggtac
     3661 ttttcaggca ggaggagcgg gcgggttctc tttatcttcc gcaacgaagg ggccggtagc
     3721 tgtcgtagcc aattatgttt ttgacagcct gccgcaggat gcgtttgccg tcgagaatgg
     3781 ccagctgtcc gaatttttgt tgactacatc gtctgaaggc gaaccacgca gcttccggga
     3841 tttgcgattc tcgttcgaaa aagccggaac ctgttcttca cgctattctg atgtgaattg
     3901 gaacagcatt cttgaacgat accgggccca tcttcccgcc gcgaccgtcc tttttcccgc
     3961 agtggcgctg cagaccctga gcaccctgtc cgagatgagt gatggacgaa tgctggtgct
     4021 agccgccgac aaagggttta cccgcgaaga agacctggcc cttctgcggg gagaccctca
     4081 gttcgaattt catgccggga actgctgctt ctcgcaggta gtgaactttg atgctatcgc
     4141 gaaatacttt cgcgcccgcg gcggtcacgc actcctgcct gcaaagcatg tcagcagcct
     4201 tcagctctgc gcctttttcg agcatccggc caaacaggat ttttccgcca catgcaaagc
     4261 ttatgcaaac gcagcacgcc catttggacc ggatgatctg ttcgcgctga tgagctggct
     4321 taatgcccag ctcgacgaga ttcccctgcc gcaggcgttg tccctgcttc gtcttactag
     4381 ctgggacaca catgctttca accgaatgtt tcctgctatc gcgcgccacg cgcgccaggc
     4441 aattcttgaa cgccaagacc tgcgccaggc cgtcctgaat acatgggcca accattaccc
     4501 gctatgccat gaagacaatg tgctggcgtt tcactgcggg gtagtgctgc tggagctgcg
     4561 cttcttcgcc gaggcgtatg agatgttcag gaaatcgcag cagctttttg ggccgtcagc
     4621 cacgaccagt tacaacctgg gtctgtgctg cctgggattg aatcagcagg accaagctct
     4681 gggattgatg cgggaagcat gcgcgctcga tccgaacttc gaagctgccc ggcaaagccg
     4741 gttgaagctg gaaaatccgg tgcaatcatg aaaacggagc tccggctagc agtccctgag
     4801 gaccgcgatt ttcttttcca gctctactcc agcactcgca tgcaggaaat agccccgttt
     4861 ggctggcccg cagcccagca gggggctttt cttcgcatgc agttcaacgc gcagcagagc
     4921 tggtatgaaa ctgcatacgc tgcggccgaa caaaagatta ttgagatcga tggttctccg
     4981 atcggccgca tcatggttgt gcgcgagccc aacgcctggc tcttgattga catctcgctt
     5041 ttgccggagc tgcgcggaag aggcgtggga acggagctga tgcagtccct tatccgcgat
     5101 tgtgccgccg caggagccgt gctcaggctg caggtcctca gggtgaatcc cgcgcagcga
     5161 ctgtataagc ggcttggctt cgctgtaacc ggcgaggatc ccatctatct gcaaatggag
     5221 ctgcggccgg caagcgatgc cgaaagtcag gcggcgcggc cctagaatgt ctgcatgctc
     5281 tcaggatttc aatgtgccgg ctgcggcgaa tggaacgaaa ccaatgttga tgcttccgcg
     5341 ggccggcgcc agagctacgt ggaggattgc caggtctgct gcaaacccaa cgtcctccag
     5401 gtgtggtggg acggcgacga gaatgagtac gtgatcaccg cggaactgga ataagaaggc
     5461 gcttaattcg ctgcccgtcg gtaaccattg ggcgtgaaac agtaatagct gtcatacttt
     5521 tatctgtgtt atcgttaccc gccatgccag acaacccagc gggaaatgcc ccacaatttc
     5581 agacagcaac ctatgcaacc cagcctgctc ctgatatctg caaaggatgc aaacagccca
     5641 ttagcggaat gtattaccgc gcgaacagcg ccattgtatg cggcagctgt gccgatgaga
     5701 tcaagcgcag ggtgcccgcg gacaatcatt ccgcgtttgt gcgggcgatc ctgttcgggc
     5761 tcgtgggatt cgcgattggg ctcaccgtgt acgcagcctt cgtgatcatg accggaattt
     5821 ccatcggcta tcttgctttg gcagttggat ggattatcgg caaagccatg atgatgggct
     5881 cgggcggaat cggcggcaga agataccaag tcaccgcggt catgctgacg tatgctgccg
     5941 tgtcgatcgc gttcattccc attgttatct ccgtcatgcg gagccacaag gcggaagcca
     6001 ggctggccca acgcgccgag ccgccgaaag ctgccgtggg ttccgccagt tccagcgcag
     6061 agcagcaggc aagtgcgctt caaggaactc caaccgctga gaagaagccg gccgtgagcg
     6121 ttggaaaagc aattggctcg ctggtaat
//
LOCUS       DASQYP010000012        12280 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_272, whole genome shotgun sequence.
ACCESSION   DASQYP010000012 DASQYP010000000
VERSION     DASQYP010000012.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 12280)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12280)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12280
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_272"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1246
                     /locus_tag="VE783_00360"
     CDS             <1..1246
                     /locus_tag="VE783_00360"
                     /inference="COORDINATES: protein motif:HMM:NF012493.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="TRCF domain-containing protein"
                     /protein_id="HYX51873.1"
                     /translation="VRHKERLKQLRKEVDVLTMSATPIPRTLHMSMVGLRDMSVIETP
                     PKDRMAIQTVVAAYDEKLVKSALEHELERGGQAYFVHNRVESIYEIAQKIQELVPRAR
                     VLVGHGQMSEGELEKVMLGFVRHEADILVATTIIENGLDIPLCNTIIINRADRHGLSE
                     LYQLRGRVGRSNRRAYAYLLVPAEQELTPVARRRLAALKEFSDLGAGFKIAALDLELR
                     GAGNLLGGEQSGNIDAVGFEMYTGMLDRAIRELKGEELAEKVSTQLNLGIDLRIPTFY
                     ITEENQRLRMYKRAAGVENESALEDVRKELQDRYGPMPPQVRYLLSAASLKLLCEKVG
                     VLAIDRKRDTVTIKFTEMAQIEPERLAKFVSRNRAAQFSPGGVLKFNLNSTRPEEVID
                     QINGLLRELSPEVVSETWLQPK"
     gene            complement(1262..1972)
                     /locus_tag="VE783_00365"
     CDS             complement(1262..1972)
                     /locus_tag="VE783_00365"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX51874.1"
                     /translation="MENQHRNRPLLISFSGVDGSGKSTQIENLRSALQGAGLRTQLVT
                     FWDDVVVGVKYREGFVHKVYKSERGIGAPGKPVKRRDKNMRGWYLTLARHFLYLLDAI
                     NLRRIIRREMRHPRADVIICDRYIYDELSNLDLENKLSRRFVRFVGRLVPLPDVAYLL
                     DADPVAAYARKPEYPVEFMKKCRRSYYELAGLLGSMTLVPALELPAAKAAVLQTAQRV
                     IRKAGHEQELLTGGIRVA"
     gene            complement(2006..2698)
                     /locus_tag="VE783_00370"
     CDS             complement(2006..2698)
                     /locus_tag="VE783_00370"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX51875.1"
                     /translation="MTIQSTTRKLLAAILAWAICLTPEIFAQSGNGQTQQKPSPSVPQ
                     TQSDNGSQAQQAPQQAPAAQSSQQTSTSPDSVAAPDEQQSSPGAQGQQTPAQQPVPRG
                     TSVNPSQGPLQPVTTYPDAAGNAQSQPDQNTPEAPQAKQPQRQTAPVGAATAERVPTA
                     GGAVAKPAGAAIAPAKQHQTRSLLIKIGAIAAAGAAVGTIFALSRGTSSKPPGAPATA
                     AAPQIIVFRSGH"
     gene            complement(2710..3477)
                     /locus_tag="VE783_00375"
     CDS             complement(2710..3477)
                     /locus_tag="VE783_00375"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX51876.1"
                     /translation="MRKLSRVLEAEVVSEFLKSEFAYTEYDRDREQFQKLVFEPDLNN
                     REENHVRHVLLFRRRDTLWRELPRDTEWWEVSLDAHDLHRIRIFPRAQWRTVACGDFS
                     VNHVADVISRQIARGDLSPLARKIQSISSVLKRNVSNQMVMMISKDEGSRATLIDGNH
                     RFLASLLLGESTPAVPFRYICGFSPNMESCCWYATNMSSLSHYLKNRIQHLWWDREAG
                     VYRWYPVALRSRPGGVYRPDVLPPVDRLEGMKQQKIG"
     gene            complement(3474..4778)
                     /locus_tag="VE783_00380"
     CDS             complement(3474..4778)
                     /locus_tag="VE783_00380"
                     /inference="COORDINATES: protein motif:HMM:NF024832.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oligosaccharide flippase family protein"
                     /protein_id="HYX51877.1"
                     /translation="MAQSETVVTFTQSETPAHDTPVSRTRSARSLVLGGSLVMLVSML
                     LVNGFNFAYNMVMARVLGPSAFGHINAAVTILLLASCISLAFQLVCAKFVARNETAGS
                     KASVIHSLLGKSWIASLAFAVVLFAGQKPFSAYLNLPSPWILGVLALGIAAYAPLGVK
                     RGAMQGVCSFHRLGGNFVAEALTRFVVGVGLVIAGYGVLGAVGAISAAVIVAYFVPAL
                     PPELRTAPEAGEPASFAEALQAIVFFIGQVVINNIDILLVKHFFPADPAGVYAAIAQV
                     GRLLYFVCWFGIVNAMFPVAAASREEQRKSEALGLPMVLVLAISAAFVLGAAIFPHFI
                     MGLLFGSKFGDTGSLLALYTLATGLYSLAVVVIAYEMSRRIANTGWLQLLVSGALILV
                     IGIFHQSLREVIMVRIVLMVIMLAMVCFPFLRRQTEAPLEAA"
     gene            complement(4799..5188)
                     /locus_tag="VE783_00385"
     CDS             complement(4799..5188)
                     /locus_tag="VE783_00385"
                     /inference="COORDINATES: protein motif:HMM:NF013868.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043856 - anti-sigma factor antagonist
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="STAS domain-containing protein"
                     /protein_id="HYX51878.1"
                     /translation="METNSRPVVVKRMPERVNGRTARDFLRDVRPFLVVDRPQIVFDL
                     SQVKQLDSAGVEMLLRCMSEAHKRDGDVKLASLSDQSAVILELTRTERLFEVYETSTD
                     AVRSFSGFLPNAMRQQLLHKRPIPIAA"
     gene            complement(5175..6344)
                     /locus_tag="VE783_00390"
     CDS             complement(5175..6344)
                     /locus_tag="VE783_00390"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX51879.1"
                     /translation="MMDIRGLILIDNDRTREDYELFSTPAGLVDVAGKSAMVRTAERL
                     QRAGISPITAVTAAEAAGSRAREDAQIPFKLTTVPEERFWRAAENAFNDLVQEGAELV
                     ILIKIGPYVETDYERLIQFHLDGECRASQLSYLGEPLQIFCLSASRRNDAASLFRSQL
                     AKCRSECPMIEHFGYVNFLGNAGDIRQFAIDILTRQTETCPAGKEIKPGVWVGHRAQI
                     QRGARLLAPAYVGSMARICSGAVITRCSSVEHHARVDLGTVVENSSVLASSYVGAGLD
                     VAHSVTGRSYVANLRRGATVAIPDRKLVAALAESSAHKLFASAGEFVSYLPRQVWRGL
                     WGAKTRIPDLQAALHQTSPSLGKAAGYEAPACDTEAADKFRPTPTLAVMRPHGNQ"
     gene            6678..7205
                     /locus_tag="VE783_00395"
     CDS             6678..7205
                     /locus_tag="VE783_00395"
                     /EC_number="2.1.1.63"
                     /inference="COORDINATES: protein motif:HMM:TIGR00589.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003908 -
                     methylated-DNA-[protein]-cysteine S-methyltransferase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methylated-DNA--[protein]-cysteine
                     S-methyltransferase"
                     /protein_id="HYX51880.1"
                     /translation="MEQRHTICFTRIESPVGLLTLAASDRALCGLHFHGHIPAPAKGE
                     VWVEDRERLRMYEEALMKYFRGELKEFSFPLDLRGTPFQIRCWEALRKIPYGQTCSYA
                     DIAREICSPRAFRAVGQANHNNPIAIVVPCHRVVGSGGSLTGYGGGLEIKEQLLRLER
                     NTAAQQLQFPMSAAV"
     gene            complement(7237..7911)
                     /locus_tag="VE783_00400"
     CDS             complement(7237..7911)
                     /locus_tag="VE783_00400"
                     /inference="COORDINATES: protein motif:HMM:NF016836.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BON domain-containing protein"
                     /protein_id="HYX51881.1"
                     /translation="MKKAYYLALFVVAIAIAYASSQTGQSAPGGNNAGSVYGNSSPNG
                     QTQPSSSPAQTPAGTANPSGASPATAPNASVKGSATDASGGGVAGAAGTPVEMPQNGE
                     AGGTALMSDADLQREIQNALGKEPTLSGDSVNVAVSGENIETNGTVNTAKEKLTATRI
                     VQSFAGNRKVVNHITVGHGSTSPASSSQESPDDHRPANSNTNPSPSNPEPNKGQPPTG
                     SNQPPR"
     gene            8263..9228
                     /locus_tag="VE783_00405"
     CDS             8263..9228
                     /locus_tag="VE783_00405"
                     /inference="COORDINATES: protein motif:HMM:TIGR01297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008324 - monoatomic cation transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation diffusion facilitator family transporter"
                     /protein_id="HYX51882.1"
                     /translation="MHGHAHPSAPRALRYSLVATFAYVLVTLTAGIRAHSLALLSEAG
                     HNVTDLLALLLSWVAVYVQTRPPSATKTFGYHRAGVVAAFINALTLVAISFYIFYEAV
                     TRLRHPVEVQPQLMIWVAVAGVIMNGAISWFLFRAARDVNIRSAFVHQVGDTLSTAAV
                     IVGGWAILWTGQTWIDPALSIGIGCLILWSSLGIIQETLNILLEGTPRGMSVHQIVNE
                     VSRVAGVNDVHDVHVWSIGSDTHALACHIRIDDMPLSESDTILRRVRDVLSSSFHIEH
                     TTIQVENEPCDVAHGCVIPVHHMNGASSPMRSAEKQHSHPLAKIR"
     gene            complement(9244..11001)
                     /locus_tag="VE783_00410"
     CDS             complement(9244..11001)
                     /locus_tag="VE783_00410"
                     /EC_number="6.5.1.1"
                     /inference="COORDINATES: protein motif:HMM:TIGR00574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA ligase"
                     /protein_id="HYX51883.1"
                     /translation="MSQIAEAIAATSKKTEKVRLVAEYFRTRPIDEAAQAAVFLSGRT
                     FPAWEERTLNVGGALLWRAVGEISGKPDVALTAAYRRYGDMGSASEELLAATAPAKGT
                     LTISEVAEAFDELARTSAAGQKLRVITDLLRRATALEAKYIVKIASGDLRIGLRASLV
                     EEAVAKAYGETLKEVQHANMLLGDIGGTLRLAAQHLLGDARMRLFHPLGFMLASPAQD
                     AEEAFSCFSPAEVEDKYDGIRAQAHCGGAEDPTVRLFSRTLDEISQSFPELPPALRAF
                     PEPVILDGEILAWSESLAQALPFSELQKRLGRKKVSRQLMIDVPVVYIVFDVLYAGGE
                     LAIQQPFSQRRTLLENIFGAVPDRGFIVAEELATSGPQGALAFEPAITEVTLRATDGI
                     PRVVLAPATTAISAQHLDELFEQARRRGNEGLMVKDTASAYSPGRRGKAWLKIKRELA
                     TLDVVVTAVEWGHGKRAKVLSDYTFAVRDGDELKDVGKAYSGLTDAEIDEMTRWFLQH
                     TTADEGYRRVVEPQIVIEVAFNNMMRSGRHASGYALRFPRIVRLRPDKSPDDIDTLER
                     VREIYDQQAPAQLMKDAEG"
     gene            11318..>12280
                     /locus_tag="VE783_00415"
     CDS             11318..>12280
                     /locus_tag="VE783_00415"
                     /inference="COORDINATES: protein motif:HMM:NF018798.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1385 domain-containing protein"
                     /protein_id="HYX51884.1"
                     /translation="MSLQLLPALESGEDVLLVGGQAVVEGVMMRSPHAWGIAIRKPSG
                     EITTHSETLERPSIKRKWLGWPFVRGIATLGQAMKLGFVASKFSLNVGLEAIAEEEAA
                     KKKAAAADGVDSGTVNQEKKAEKPSSEIGTWGVVLSMIFSVAFFIFMYKFVPLVAATQ
                     IKHHWHALNNNFVFNLVDGVIRIALFLLFVWGISLSKEIKRIYHYHGAEHKTVFAFED
                     HGMPSIREAQRYTTYHPRCGTSFLMTIMLICIFVYAAVPVQGFWAKFALRIAFLPIIS
                     SVSYELIRFSARHGKSIFALMTKPGLSLQRITTQPPTDDQVECAI"
BASE COUNT         2556 a         3565 c         3572 g         2587 t
ORIGIN      
        1 tgttcgtcac aaagaacgcc tgaagcagct tcgaaaagaa gttgacgtgc tcaccatgtc
       61 cgccactcca attccgcgca cgctccacat gtcaatggtc gggcttaggg acatgagtgt
      121 gattgaaacg ccgcccaaag accgcatggc gatccaaacc gtggtggctg cctacgatga
      181 aaagctggtc aagtcagcgc tggaacatga actggagcgg ggtgggcagg catattttgt
      241 ccacaacagg gtggagtcaa tctacgaaat cgcgcagaaa atccaggaac tggtgccgcg
      301 tgctcgagtg cttgtgggcc acgggcaaat gagtgaaggc gagttggaga aagtgatgct
      361 cggcttcgtg cgtcatgagg cggacattct ggtggcaacc acgatcattg aaaatgggct
      421 tgatatcccg ctctgcaaca ccatcattat caatcgcgcg gaccggcacg gcctttctga
      481 gctttaccaa ttacgcggac gagtcggccg atccaatcgc agggcttatg cctaccttct
      541 tgtgcccgcc gagcaggagc tcacgcccgt tgcgcgtcgc cggctggctg cactgaaaga
      601 gttttcagat cttggagcgg gattcaagat tgcggcgctc gatcttgaac ttcgtggcgc
      661 cggcaatcta ctcggaggcg agcagagcgg caacatagat gccgtaggct ttgagatgta
      721 caccggcatg ctggatcgcg cgatccgcga gcttaagggc gaggaactgg ccgagaaggt
      781 gagtacccag ctcaacctcg gaatcgacct gcggatcccg actttctaca tcacagaaga
      841 aaatcagcgc ctgcgcatgt ataagcgcgc ggccggagtt gaaaacgaat ctgcgttgga
      901 agacgttcgg aaggaactcc aggaccgcta cgggcccatg ccgccgcagg tgcgctacct
      961 cctttccgcg gcatcgctca agctgctatg cgagaaagtg ggcgtccttg ccattgaccg
     1021 caagcgtgac acggtgacca tcaagttcac cgagatggca cagatcgagc cggagcggct
     1081 ggcgaagttc gtctcaagga accgtgcagc acagttctcc ccgggcggtg ttctgaagtt
     1141 caatctgaac tccacgcggc cggaagaagt cattgaccag atcaatggtc tgctgcgcga
     1201 gttgagcccg gaagttgtgt ctgaaacctg gctgcagccg aagtaatgac tccgctcagc
     1261 gctacgctac acggatgccg cccgtcagca actcctgctc atgccctgcc ttccggatta
     1321 cccgttgagc agtctgcagc acagctgctt tcgcggctgg cagctcaagc gccggaacca
     1381 gggtcatgct gcccagcagg ccggctaatt cgtaatacga gcggcggcac ttcttcatga
     1441 attccaccgg atactccggt ttccgcgcgt acgcggccac cgggtctgca tcaagcaggt
     1501 acgcgacatc cggcagaggg accaggcggc caacaaatcg tacgaaccgg cggctcagct
     1561 tgttttccag gtcaaggttg gagagctcgt cataaatgta gcggtcacaa atgatcacgt
     1621 cagcgcgcgg gtgacgcatc tcgcgacgga tgatccgccg caggttgatg gcatccagca
     1681 aatagaggaa atgtcgcgcc agcgtgagat accagccgcg catgttctta tcgcggcgct
     1741 tcaccggctt gcccggcgcg ccaatgccgc gctcgctttt gtagaccttg tggacgaagc
     1801 cttcgcggta ctttacccca accaccacgt cgtcccagaa ggtgacgagt tgggtgcgca
     1861 gtccggcgcc ctggagcgcg gagcgcaggt tctcgatttg agtggacttg cctgatccgt
     1921 ccacgccgga aaagctgata agcagaggcc tattgcgatg ctggttttcc atgctgaaac
     1981 cgacaacgta gtttttaatt ctgtgttagt gcccacttct gaaaacgatg atttgcggcg
     2041 ccgcagcggt cgcgggagct cccggcggct ttgacgaagt cccgcgactg agagcaaaga
     2101 tcgttcccac ggctgctcca gctgcagcaa tcgccccaat cttgatcaga agagaacgag
     2161 tctgatgctg cttggcgggc gcaatggccg cgcccgcagg ctttgccacc gcgcctccgg
     2221 cggttggcac ccgctcagcg gttgcagcgc ccaccggggc tgtctggcgc tgtggctgtt
     2281 ttgcctgcgg cgcctcgggc gtgttctggt cgggctggct ctgcgcgttg cctgccgcat
     2341 ctggatacgt cgtcaccggc tgcaagggcc cttgcgaggg attcacgctg gtcccgcgcg
     2401 gcacaggctg ttgtgcaggc gtttgctggc cctgagcgcc cggagaagac tgctgctcgt
     2461 caggtgcggc cacagaatca ggagacgtgc ttgtctgctg ggatgactgc gctgccggag
     2521 cctgctgtgg cgcctgctgg gcctgagagc cgttgtcact ctgggtctgc ggtactgacg
     2581 ggcttggctt ctgctgagtc tggccatttc cgctctgggc aaagatctca ggggtaaggc
     2641 agatcgccca ggccaggatc gcggccagca gcttacgcgt tgtgctctga attgtcataa
     2701 ggggaacctc tatccgatct tttgttgttt catgccttcc agtctgtcca ccggcggaag
     2761 aacatcaggc ctatacaccc cgcctgggcg gcttcgcagc gccaccgggt accagcgata
     2821 gacacccgcc tctctgtccc accagagatg ttggatgcgg tttttcaggt aatgggaaag
     2881 gctggacata tttgttgcgt accagcagca gctctccata ttgggggaaa acccgcagat
     2941 atagcggaag ggcacagccg gggtgctttc tcccaaaagg agcgaggcaa ggaagcgatg
     3001 attgccgtca atcagagtgg cgcggctccc ctcgtccttg ctgatcatca tcaccatttg
     3061 atttgaaacg tttctcttca ggacactgga gatgctctga atcttgcggg cgagagggga
     3121 gaggtctccc cgggcgatct gccgcgagat gacgtcggcc acgtgattaa cggaaaagtc
     3181 cccgcaggcc acagtgcgcc actgggcccg tggaaatatc cggatcctgt gcagatcatg
     3241 ggcatcgagg ctgacctccc accattcggt gtctcgaggc agttcccgcc atagcgtgtc
     3301 ccgcctgcga aacagtaaaa cgtggcgcac atggttctct tcccggttat tcaggtctgg
     3361 ctcgaagacc agcttctgga actgttcgcg atcacggtcg tattcggtgt aagcaaattc
     3421 gcttttcagg aattcggata ccacctctgc ttccagaacg cgcgagagct ttctcatgca
     3481 gcctccagcg gcgcctccgt ctggcggcgc aggaagggaa aacagaccat tgccagcatg
     3541 atgaccatca gcacgatccg caccatgatc acttcacgca ggctctgatg gaaaattcca
     3601 ataaccagaa tcaatgcccc gcttaccaga agctgcagcc agcctgtatt cgcgatgcga
     3661 cgagacatct catacgcgat cacgactact gcgagcgaat aaagtcctgt cgccagggtg
     3721 tagagagcga gcagcgagcc ggtgtcacca aacttggagc cgaacagcag tcccatgatg
     3781 aagtggggga agatggccgc tcccagtaca aacgcggcag agatggccag gacaagcacc
     3841 ataggcagcc caagagcttc ggactttcgt tgctcttccc gggaggcagc tgccacaggg
     3901 aacatggcgt tcacaatgcc gaaccagcag acaaagtaaa gcaaccgccc aacctgcgcg
     3961 attgcagcgt agactcccgc aggatcagcg ggaaagaagt gcttcaccag caagatgtca
     4021 atgttattga tgactacctg gccgatgaaa aagacgatgg cctggagcgc ctcagcaaag
     4081 gatgctggtt cgccagcctc gggcgcggtg cgcagctccg gcggcagcgc gggaacgaaa
     4141 tacgccacaa ttactgcagc ggagatggcg cccactgcgc ccagcacacc gtaaccagcg
     4201 atgaccagtc ccacgccgac gacaaagcgg gtgagagctt cggctacaaa attcccgccc
     4261 aggcggtgaa atgagcagac tccctgcatt gctccccgtt tgactcctaa tggcgcatac
     4321 gcagcaatac ccagcgcaag cacgccgaga atccagggac tcggcaggtt caggtaggcc
     4381 gagaaaggct tttgtccggc aaagagaaca actgcaaaag cgaggctggc aatccatgat
     4441 ttgcccagca acgaatgaat cactgaggcc ttgctgccgg cagtctcgtt gcgcgcaaca
     4501 aacttcgcac acacgagctg gaaggccaag ctgatgcagg aggccagcag cagaatggtg
     4561 accgccgcat tgatatggcc gaatgcggaa ggcccgagga cgcgagccat caccatgttg
     4621 taggcgaagt tgaagccgtt caccagcaac atgctcacga gcatgaccag actgccaccg
     4681 agcaccagcg agcgggcgct gcgcgtccta gatacaggcg tatcgtgggc gggagtctct
     4741 gactgagtaa acgtgaccac cgtctcagac tgggccatga cgtgagttct tctttccctt
     4801 atgcggcgat cgggatcggc cgtttatgca gcaactgctg ccgcatggca ttcggcagga
     4861 acccgctgaa gctgcgaacg gcatcggtcg aagtttcata gacctcgaac aggcgctcgg
     4921 tgcgggtaag ctcaagaatt actgcggact ggtctgacag cgacgccaac ttaacatcgc
     4981 catcgcgctt gtgtgcttct gacatgcagc gcaggagcat ctccacgccg gctgaatcga
     5041 gctgcttcac ctgcgaaaga tcaaagacga tttggggacg gtcaactacc aggaacggcc
     5101 tgacgtcgcg gaggaaatcg cgcgcggtgc ggccattcac tctttccggc atgcgtttga
     5161 ccacgacggg acggctattg gtttccatga ggcctcatta ctgcaagagt gggtgtagga
     5221 cgaaacttgt ctgcggcttc cgtgtcacag gccggggctt cgtagccagc cgcctttccg
     5281 agactcggcg atgtctgatg aagcgccgcc tgcaggtcgg gaattctggt ctttgctccc
     5341 cacagtccgc gccacacctg cctgggcagg tagctcacaa actcgcctgc tgacgcgaac
     5401 agcttgtgtg ccgagctttc cgcaagcgcc gcgaccagtt tgcggtccgg tatggccacg
     5461 gttgcgccgc gacgaagatt ggcaacgtag gagcgccccg tcacggagtg agcgacgtcc
     5521 agtccggctc caacatatga actggcgaga acgcttgaat tctccacgac tgtgcccaga
     5581 tcaacacgag cgtgatgttc gactgaggag cagcgtgtga tgacggctcc agagcaaatg
     5641 cgggccattg atcccacata cgcgggcgcg agcagcctgg cgccgcgctg aatttgcgct
     5701 ctgtgtccca cccagacgcc cggcttgatc tccttacccg ctggacaggt ctcggtctgg
     5761 cgagtcagta tgtcaattgc aaactggcga atatcgccgg cattgccgag aaaattgaca
     5821 tagccaaagt gctcgatcat cgggcactca ctgcggcatt tcgccagttg gctgcggaaa
     5881 agggacgctg cgtcattcct gcgcgaagcg ctcaggcaga aaatctggag cggctcaccc
     5941 aggtaagaga gctggcttgc tctgcattca ccatccaggt ggaattggat aagccgctcg
     6001 taatcggttt ccacataggg cccaatctta attaggatta cgagttcagc tccctcctgc
     6061 accagatcat tgaaggcgtt ttctgcagcg cgccagaatc gttcctcggg aacggtcgtc
     6121 agtttaaacg ggatttgtgc gtcttcccgg gcacgcgatc ccgcggcctc ggcggcggtc
     6181 acagcggtta tgggactgat acctgctctt tgcagccgtt cggctgttct caccattgcg
     6241 ctttttccgg caacatccac cagacctgcc ggcgtggaaa atagctcgta atcctctcgc
     6301 gttcggtcgt tatctatgag aatgagccca cgaatatcca tcacgatccc ctgctagatt
     6361 gctgctcttt tcagcgtgtt ttatcgcggg cctgatcagg cgaagagaga ttctgccctc
     6421 ggcaaagaag ccagacaggt tggactgcgg ttggcgtact accgaaaccc atgggaccct
     6481 caggctctga atctcagccc ggacttctac cggatcatga cccggtgaaa cgtgcttttt
     6541 gtcagcgttg cgtctctcgc accgacacaa cgccaccgcc agaatttatg gcagcagtgt
     6601 tggaatagat gtgaattgga gtgctggtgt tgtaaggttt cagagctcct gcagagaggc
     6661 cgcagtaaaa tttttgcatg gaacagagac atacaatttg ctttacccgc attgagtctc
     6721 cggtggggct tttgacgctg gcggcttccg accgagcgct gtgcggtctc catttccacg
     6781 ggcatattcc ggctcctgcg aaaggcgaag tgtgggtgga agaccgcgaa cggctgcgga
     6841 tgtatgaaga agcattgatg aaatatttcc ggggggagct aaaggaattt tcttttccgc
     6901 tcgacttgcg aggcacgccg ttccagattc gctgctggga agcgctgcgc aaaatcccat
     6961 acggtcagac ttgttcatac gcggatattg cgcgcgaaat atgcagtccg cgagcattcc
     7021 gcgctgttgg ccaggcgaac cacaacaacc cgatcgcaat cgtcgtgccc tgccatcgcg
     7081 tggtcggttc aggtggttcg ctcaccggtt acggaggcgg gctggagatc aaagaacaac
     7141 tgctgcgcct ggaaagaaat acagcagcgc agcagttgca atttccaatg agcgcagccg
     7201 tgtagcgccg gggccgcgtt taccaaaatt tacaaattac cggggcggct gattcgagcc
     7261 ggttggcggc tgtcccttgt tcggctccgg gtttgacggg ctggggttcg tattggagtt
     7321 tgccggacgg tggtcatcag gcgactcttg tgacgaactt gccggtgacg tgctgccgtg
     7381 gcccacggtg atgtggttaa ccacctttcg atttcccgca aacgactgca cgatgcgggt
     7441 ggccgtgagt ttttccttcg ccgtattcac ggttccgttg gtctcgatgt tttcgcctga
     7501 gacggccacg ttcacgctgt cgccacttag tgtgggctct ttgccaagag cgttctgaat
     7561 ttcgcgctgc aggtcggcat cactcatcaa cgcggtccct ccggcctcgc cattctgggg
     7621 catttcgacc ggagttccag cggctccggc gacgccaccg ccagaagcat ccgtagcgga
     7681 gcccttaact gatgcattcg gggcagtagc tggcgaggcg ccacttggat tggccgttcc
     7741 ggcaggcgtc tgagccgggg aagaactggg ctgggtttgg ccgttgggcg agctgttgcc
     7801 gtaaacacta ccggcattgt ttccgccagg cgcagactgg ccggtctgag atgacgcgta
     7861 cgcaatggcg atcgccacaa caaacagagc gaggtaatat gcttttttca tcctggcctc
     7921 cgggaaactg agcggggacg gcttttgcgg acattggtgc cccagctctt cttattacgg
     7981 gtcgaaaaag aattcagcgg agttgctgca tttgcggcac cattcggcga cctttcgcca
     8041 gttacctccg actggcccca attgattaat aatgctggat ttaaagcgag agttgcatga
     8101 caatcattgc accagtctgt tttcggcgtg tggatgcagg caacccagat tgggcatcct
     8161 gatgcaactc cgggctacac gcgatccctc accgtaagta ggcgaaaaag tctatttcca
     8221 ttacgaacgg caggagttag aagaaagctg taaactcacc ttatgcacgg ccacgcgcac
     8281 ccatctgctc caagagctct gcggtactcg ctggtggcga cgttcgccta cgtgctggta
     8341 acgctgaccg ccggaatccg cgcgcatagc cttgcgctgc tttccgaggc cggccacaac
     8401 gtgaccgatc tgcttgcgct tctgctttca tgggtcgcgg tttatgtaca gacgcgtccg
     8461 cccagcgcaa caaaaacgtt cggatatcat cgcgccgggg ttgtggcggc attcatcaat
     8521 gcgctcaccc tggttgccat atcgttctac attttctacg aagcggtaac gcgactgcgg
     8581 catccggtag aagtgcagcc gcaattgatg atctgggtgg cggttgcggg cgtaatcatg
     8641 aatggcgcaa tctcatggtt tcttttccgc gccgcgcgcg acgtaaacat ccgcagcgcc
     8701 ttcgtgcatc aggtcggcga tacgctctcc accgccgctg taatcgtggg cggctgggcg
     8761 attctctgga ctggacaaac ctggattgat cctgcacttt cgatcggcat cggctgcctg
     8821 atcctttggt cctcgcttgg catcatccag gagacgctga atattctgct ggaaggcaca
     8881 ccgcgcggaa tgtccgtcca tcagatcgtc aacgaagtaa gccgggtggc tggcgtaaat
     8941 gacgtgcatg acgtccacgt ctggagcatc ggttctgaca cacacgccct ggcttgccac
     9001 atccggatcg acgacatgcc gctttcggaa agcgacacca ttctgcgccg tgtacgcgac
     9061 gtgctttcca gcagcttcca cattgagcac accacaattc aggtggaaaa cgagccttgc
     9121 gacgtggccc atggctgcgt cattcccgtg caccacatga acggagcatc gtctcccatg
     9181 cgttcagcgg aaaagcagca ctctcatccg ttggcgaaga ttcgctaacc ccggcaaacc
     9241 cctctaaccc tcagcgtctt tcatcagctg cgccggcgcc tgttggtcat agatctcgcg
     9301 cacccgctca agcgtgtcga tatcatccgg cgatttgtcc gggcgcagcc gcacgatgcg
     9361 cgggaagcgc agggcatagc cgctggcatg ccgaccagag cgcatcatgt tgttgaacgc
     9421 gacctcgatc acaatttgcg gttcgaccac gcggcggtag ccctcatcgg cagtggtgtg
     9481 ttggaggaac cagcgagtca tttcatcgat ttcagcatcg gtaaggcccg agtacgcctt
     9541 gcccacgtct ttcaactcat ctccatcacg aactgcgaag gtgtaatcac taagcacttt
     9601 tgcgcgtttt ccatggcccc actcaactgc cgtaacgacc acgtctaaag ttgcgagctc
     9661 acgcttgatc ttcagccacg ccttgccgcg ccgtcccgga gagtacgcgg aagcagtatc
     9721 tttcaccatg agaccttcat tcccacggcg gcgggcctgc tcgaaaagct cgtccaggtg
     9781 ctgtgccgat attgcggtag tggcaggcgc aagcacgacg cgcgggatgc catcggtggc
     9841 acgaagagtc acttcggtta tggcaggctc gaaggctaaa gcaccttgcg gaccggatgt
     9901 ggccaactcc tcagcaacaa tgaaaccccg atcagggacc gcgccaaaga tattctcaag
     9961 caacgtccgg cgctggctga aaggctgctg aatcgccaac tcgcctcctg catagagtac
    10021 gtcgaagacg atgtatacca cgggaacatc gatcattagt tgccggctga cttttttccg
    10081 gccaagcctc ttctgcaatt cggaaaaagg aagcgcctgc gccaatgatt cactccaggc
    10141 cagaatttcg ccgtcaagga tcacgggctc aggaaaggcg cgtaacgccg gcggcagttc
    10201 tggaaatgat tggctgatct catccagggt gcgcgaaaaa agccttaccg tcggatcctc
    10261 cgcaccgccg cagtgtgcct gagcgcggat gccgtcgtat ttgtcttcga cttccgcggg
    10321 actgaagcag gagaaggctt cttccgcatc ttgtgcaggg ctggccagca tgaacccgag
    10381 gggatgaaag aggcgcatcc gggcgtcacc gagcaaatgc tgggccgcca gccgaagcgt
    10441 gccgccgata tcgcccagca gcatgttcgc gtgctgtacc tccttcagtg tctcgccgta
    10501 cgctttcgcg acagcctctt caaccaagct tgcgcgcagc ccaatacgca ggtctccact
    10561 ggcgattttc acgatgtact tggcttctag tgccgtggca cgccgcaaaa ggtcggtaat
    10621 gacgcgcaac ttctgacccg ccgcagaagt gcgggccagt tcatcaaacg cttcggcaac
    10681 ttcggaaatc gtaagtgtcc ctttggcggg ggcagttgcg gccagcagct cctcgctggc
    10741 cgaacccatg tctccgtacc tgcggtaggc cgccgtaagc gctacgtccg gcttgccgga
    10801 aatttccccc actgcccgcc aaagcagcgc cccaccgaca ttcaacgttc gctcctccca
    10861 ggcaggaaag gtccggccgg agaggaaaac ggcggcctgc gcggcttcat cgattggccg
    10921 ggttcgaaag tactccgcta caagccggac cttttcggtc tttttgctgg tggcggcgat
    10981 cgcttccgca atttgggaca agagctgcaa cgtgtaaact cggcctgtta gatgacgtgg
    11041 gaggtacttg gcatctgata ttccgttctt tcgctagcac gggctcttgc cgaagcgctg
    11101 gctccttccg gccagggctc gggcggaagt gatttcaatg gacccgagta ccaaatatcg
    11161 ccgttcctcg ggtttttcct ggtgcctgcg ctggcaatct cagctaaaat attattttga
    11221 agccacttgt tcgacccggc aaagtccggg agccccggac cagcttccat catctaatca
    11281 gacaatgaga tattggcgcc aattcctccg ctaccttgtg tcccttcaac tgctgcccgc
    11341 cctcgaaagc ggcgaggatg tgctgctcgt cggcggtcag gcggtggttg agggagtcat
    11401 gatgcgctcg ccccatgcgt gggggattgc catccgcaag ccttcagggg aaatcaccac
    11461 acacagcgag acgctggagc ggccctcaat aaaacgtaag tggctgggct ggccatttgt
    11521 gcgcggcatt gcgacccttg gccaggcgat gaagctggga tttgtagctt cgaaattttc
    11581 gctgaatgtt gggctggaag ccattgccga agaagaagca gctaaaaaga aggcggcagc
    11641 cgcagacgga gtagattccg ggacggtcaa ccaggaaaag aaggcagaga aaccatcctc
    11701 cgagattggc acctggggtg tggtgctgag catgattttc tcggtcgcct tttttatctt
    11761 catgtacaaa ttcgtgccgc tggtagcggc cacgcagatc aagcatcact ggcacgccct
    11821 gaataacaat ttcgttttca acctggtgga tggcgtaatc cggatcgcac tcttcctgtt
    11881 gtttgtgtgg ggaatctcgc tttccaagga gatcaagcgg atttaccact atcacggcgc
    11941 cgaacataag accgtgttcg cttttgagga ccacggaatg ccgagcatcc gcgaggcgca
    12001 gcggtacacc acgtatcacc cgcgctgtgg caccagcttc cttatgacga tcatgctgat
    12061 ctgcatcttc gtttacgccg cagtgccggt tcagggtttc tgggccaagt ttgccttgcg
    12121 tatcgccttc ctgccgatca tctcgtcagt ttcgtacgag ttgattcggt tctcggcgag
    12181 gcacgggaag tcgatctttg ccctgatgac caagcctggc ctctcgctgc aacgcatcac
    12241 cactcagccg cccaccgacg atcaggtgga gtgcgccatt
//
LOCUS       DASQYP010000013        14226 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_296749, whole genome shotgun sequence.
ACCESSION   DASQYP010000013 DASQYP010000000
VERSION     DASQYP010000013.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 14226)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14226)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14226
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_296749"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..890)
                     /locus_tag="VE783_00420"
     CDS             complement(<1..890)
                     /locus_tag="VE783_00420"
                     /EC_number="2.7.7.41"
                     /inference="COORDINATES: protein motif:HMM:NF013327.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004605 - phosphatidate
                     cytidylyltransferase activity [Evidence IEA];
                     GO_process: GO:0016024 - CDP-diacylglycerol biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidate cytidylyltransferase"
                     /protein_id="HYX51885.1"
                     /translation="MKRILTAVVLIPLVLLIVFKAPLWLFALAVAGIIVVGLHEYLGI
                     AETAGVKPFHKLTYAVSVALLILISVLSQPRSGSAQFHITALMWMPALLAPLIFGIPL
                     VFRKDLASGMASVAVSIFGVFYIAGSLALLVSLRSDVHLRVLVVFTLFSVWAGDIAAY
                     YVGRSIGRHKLAPVVSPNKSWEGAIASVMASMLVALLTFHFQFSIAVWLNSGMWDGVA
                     AGQPPSEPYGLTPIAAALLGLLTNIAAQFGDLFESALKRGAGVKDSGTLLPGHGGILD
                     RIDALLFAIPVVCYFSFFMRT"
     gene            complement(887..1711)
                     /locus_tag="VE783_00425"
     CDS             complement(887..1711)
                     /locus_tag="VE783_00425"
                     /inference="COORDINATES: protein motif:HMM:NF011405.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016765 - transferase activity,
                     transferring alkyl or aryl (other than methyl) groups
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isoprenyl transferase"
                     /protein_id="HYX51886.1"
                     /translation="MRTIPEGLDRKEAELYSQLDPSQFPKHVAIIMDGNGRWAKRRHL
                     PRIAGHRRGVESVRYVIETAARIHLPAVTLYAFSAENFLRRPPGEISFLMKLLHRYLK
                     NELDLMQRNNIRLQFIGRVHLLPQEVQERMAWAKEQTSRNSGMVLTLALNYGSRSEIV
                     DAVKAIVNAAANNGGIEHLKIDEDLINQHLYTKNLPELDLVIRTSGEMRLSNFLLWQA
                     AYAEIYVTKTLWPDFRGLHLLEAIQEFQKRERRYGGLNEPVLNGTHPKVPAHSHTK"
     gene            1964..2269
                     /locus_tag="VE783_00430"
     CDS             1964..2269
                     /locus_tag="VE783_00430"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX51887.1"
                     /translation="MLVNNTQFGKSSLWRWTAFTCILLVVLMTGVESVHAHSGVADGR
                     ASSSCAICISAHANAPVVSYHPLPTLAAVAMVAVPFQSQGKGISAELSLFIRPPPAA"
     gene            2330..3664
                     /locus_tag="VE783_00435"
     CDS             2330..3664
                     /locus_tag="VE783_00435"
                     /inference="COORDINATES: protein motif:HMM:NF014385.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HYX51888.1"
                     /translation="MFRASLLLAAFLPANFVFGQTTFSIASPPAAGAQTAPQQQAPAA
                     PPSRPPAPARMITLDEAITLAIASSPSLKASQTQIQQNQAQEITANLRPNPTFQGDSQ
                     FIPFFTPSQLTQNVEQYDLGVGYTFELGGKRHKRLSAARDQTAVTAAQVADTERALTF
                     NVAQQFINVLLAKSNLQLAEDDLKSFQQTVDISQERYRAGDISEGDYLKIKLQMLQFQ
                     TDVTTARVAKVQAQSSLRQLIGYAALPHDYEVAGDLIYQPLKARLEDLQAKALQERPD
                     LRAAQKGITAGKSQITLAKANGVPDLNFSTNYSHTPGLNSLSWFVSIPIPVFDRNQGE
                     IARTKFALTQNQLTATAAEDTVMTDVANAWESAASNQEVLQLYESGYLKDAQDSRDIS
                     AYAYRAGAAALLDFLDSERSYRATQLAYRQALAAYMLSLEQLRQAVGTRSLP"
     gene            3661..4830
                     /locus_tag="VE783_00440"
     CDS             3661..4830
                     /locus_tag="VE783_00440"
                     /inference="COORDINATES: protein motif:HMM:TIGR01730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HYX51889.1"
                     /translation="MKRKLSSLIRGENIAITLLFASLALMTACSGGSPKAKTDDSSGS
                     GPNPDLFTVPKDQLGHIQVVTVQPTEFPRILRLTGAVAFNGFLTTPVITQVGGPVSRI
                     IVSPGQQVRKGEPMLYVSSPDYSQLRANFLKARDAHSLAHKNYVRAQDLYAHHAIAER
                     DLQAAESAEIQAQADLQSAEQSLKILGIPKPETLAEHPVSPEVPLIAPLTGEAVERLC
                     APGQLIQAGVTQCFTISDMKTVWVLANVYQDQLAYVHVGDPVTIRTDAYPDLFHGRIS
                     FMGAALDPTSRTLQARIDTANTNGKLRKDMYVTATVVAGKISNALLVPDSAVLRDAEN
                     EPFVYVEVGQAQFARRPVKLGASDGGKTQIVSGLKPGEQVVGDGSLFLQFANSGQ"
     gene            5123..8218
                     /locus_tag="VE783_00445"
     CDS             5123..8218
                     /locus_tag="VE783_00445"
                     /inference="COORDINATES: protein motif:HMM:TIGR00914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0051139 - metal cation:proton antiporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CusA/CzcA family heavy metal efflux RND
                     transporter"
                     /protein_id="HYX51890.1"
                     /translation="MIHRIVQMALRQRFLVLALVLLLIVAGTVAFQRMPVDAYPDLAP
                     PMVEIVTQWPGHAAEEVERLITLPLEVEFSGAPKMEVMRSISLYGLSDIRLTFEVATD
                     NYFARQVIFQRIGDAQLPSGVTPSMAPLFSPSGLVYRYVLESPDRSPQELKTIEDWVV
                     ERAYRSVPGVADDSGLGGTVMQYQVLLDPARLYGYHMTVQQVMQALSNNNSNAGGGFY
                     SQGGQFYYVRGVGLVQNTNDIGNIIVASVKGTPIRIRDVGDVTIGHAPRLGQFGFQTH
                     TSNQDDAVEGIILMRRDEQTQEVLKAVQKKTDDLNNSVMPKDVKIRPFYDRSELVKLT
                     TDTVEGNLVRGMIFVILVLLFFLFNIRAAIIVSLTIPLSLLFAFVVLHARNVSANLLS
                     IGAIDFGIIIDGTVVMVENIYRELAERHGQEYKLTDVILAAAADVDRPIFYSVAVIIA
                     GYLPIYALSGPSGKLFHPMADTMSFALIGALLLTLTLVPVLASYWFKSGIKEKTNHAF
                     EWIKGIYTRQLDFCLEHRRLTLTVAVLLFGVTLILVPYIGGEFMPHLDEGALWFRATM
                     PYTISFEESSKIVPQVRNILISYPQVTVVGSEHGRPDDGTDPTGFFNAEFYVGLKPYG
                     DKSWKGEIDTKEKLVEAIDKRLKAFPGIIFNHTQPAEDAVDEALTGLKSSLAVKIYGT
                     DLQVLEHKALEIKKVLEAVPGFTELTVVRELGQPSLNINVDREKIARYGINVSDVEAV
                     IQAAVGGQAATQVVQGEKLFDLVVRMQPQFRSNAEQIRNLLVGTPDGQQIPISQLASV
                     EQGNGASFIYRENNSRYIGVQYSIEGRDLQRAVEDGQAAVKKNVTIPAGYRTEWGGEY
                     DQFLAAKQQLSVIGPLAVLLIFFILFALYGNFKFPAIIALDVVLTEPVGALIALKLTH
                     TPFSVSSVLGLLALMGVSVETGVILVSYINKMRREGMDIPTATREAALLRLRPIMMTA
                     LVACLGLLPAALSTGIGSDTQKPFAIVIVAGLISRLFLGFFVNPVLYRTVAREGDVLQ
                     V"
     gene            complement(8235..9023)
                     /locus_tag="VE783_00450"
     CDS             complement(8235..9023)
                     /locus_tag="VE783_00450"
                     /inference="COORDINATES: protein motif:HMM:NF013143.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metal ABC transporter permease"
                     /protein_id="HYX51891.1"
                     /translation="MSAGELYALLLALLIGVAAGLVGSFALMKRMLLASDVISHLALP
                     GLGIAFLLKINPLVGGGAALFLGTLLIWRLQTKSGLAVEAAIGVVFATAVAIGASITP
                     REDILEALFGSFQRISLTSFFVGAVAVAGVIVALFLLKDRLVLSIFSPELAATSGVKV
                     RLLDLYFLLLFSLVVLVGLRYMGALLASALLILPAATGRQLASNIAGFLAASASASVT
                     AVLLGYLASSTVWKMSTPAPAIVMFGAAMFVISLAFSNRKLTLT"
     gene            complement(9023..9757)
                     /locus_tag="VE783_00455"
     CDS             complement(9023..9757)
                     /locus_tag="VE783_00455"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metal ABC transporter ATP-binding protein"
                     /protein_id="HYX51892.1"
                     /translation="MPEGVVEYKAQLEPLLSVRDLSVEAGGRSIIRDLTFEVKPGGCL
                     AIIGPNGAGKTLLLNALMGLVAYRGEVLWSHETRLGYVPQRITADRQIPIHFRDLLHA
                     KAKLLNVREDELHAVCDRVGLGPELLDTRIGVLSGGQFQKALIAFALVGRPNVLLFDE
                     PTASLDEITEERIYELLHDLQIERGITLILISHDLSIVYRYADTVLCLSKGHPCMGAP
                     RDVLTPELLEDLYSAPPRYYQHVEEH"
     gene            9874..10728
                     /locus_tag="VE783_00460"
     CDS             9874..10728
                     /locus_tag="VE783_00460"
                     /inference="COORDINATES: protein motif:HMM:NF024762.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglutaminase-like domain-containing protein"
                     /protein_id="HYX51893.1"
                     /translation="MQSKASPEVIQAFAALVDSKVADERLDLLRAALTFARIEYPEID
                     VELYLRRVEALARRAKARISDYDEPSECISALNHVLFEEEMFRGNTVDYYSPRNSFIN
                     DVLDRRLGIPISLALVYMEVGRRAGFPLFGVGMPGHFLLKHYAVDGQAILIDAFERGS
                     IVSEEDCRHKIDSIYSGQLTLQPEFLLTVTPRQMLTRMLNNLRTIYLAQRDFRRAVQV
                     VDLILVIYPRSPEDVKQRAALRYNLHDYRGALSDFEEYVRMAPEASDAEEIRQTALGL
                     RRSMAMMN"
     gene            complement(10914..11450)
                     /locus_tag="VE783_00465"
     CDS             complement(10914..11450)
                     /locus_tag="VE783_00465"
                     /inference="COORDINATES: protein motif:HMM:NF016246.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF488 domain-containing protein"
                     /protein_id="HYX51894.1"
                     /translation="MPTIYTLGHSTRDLASFSHLLQTHEILLLEDIRAFPMSRRHPHF
                     NRDHLELWLPEVGTDYVWEPDLGGRRKRQMPADQSPNIALRNESFRNYADYMLTSKFQ
                     AAIDRLVERASARKTAIMCAEQLWFRCHRMLVSDFLVAKGHTVMHILEDKPPKEHRLT
                     EEARIVEGRLVYRGDRLL"
     gene            complement(11485..12894)
                     /gene="selA"
                     /locus_tag="VE783_00470"
     CDS             complement(11485..12894)
                     /gene="selA"
                     /locus_tag="VE783_00470"
                     /EC_number="2.9.1.1"
                     /inference="COORDINATES: protein motif:HMM:TIGR00474.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004125 - L-seryl-tRNA(Sec) selenium
                     transferase activity [Evidence IEA];
                     GO_process: GO:0016260 - selenocysteine biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L-seryl-tRNA(Sec) selenium transferase"
                     /protein_id="HYX51895.1"
                     /translation="MPTSSKSELYRLLPAVDELLHSPYLAPMIAREGQPAVTEAVRAV
                     VAQMRQEISAGRLSTPEQVKLTVDGIARAIERQLRQAMQFSLRPVINATGVILHTNLG
                     RAPLAQSALKRVSEVAGRYSNLEFDIAEGQRGKRDVHVERLFSRLLNQEGVSGIRSVV
                     VNNCAAAVMLALNTLAEGGEVIVSRGELVEIGGSFRVPDVMSKSGATLREVGTTNRTR
                     VQDYERAINERTRLLLRVHRSNFAIIGFTEQPQLEELCELGHKHKIPVMEDLGGGALV
                     PLRSMGVNESGVADSLRAGVDLVTYSGDKMLGGPQAGVLSGREELIARVRSNPLFRAL
                     RVDKLTYSVLEATLMEYIRQNHDAIPLLRMMRLTPEVIRTRAEALREQLSDANKLNVA
                     ITPGESLVGGGSAPTSTLPTFLLTLTSKSLSADELATALRKADPPIVARVDEGRVLLD
                     LRTVFEDEELVIVKALREI"
     gene            complement(13081..>14226)
                     /locus_tag="VE783_00475"
     CDS             complement(13081..>14226)
                     /locus_tag="VE783_00475"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: protein motif:HMM:NF012492.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003678 - DNA helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA helicase RecG"
                     /protein_id="HYX51896.1"
                     /translation="LSARRVLEPAGYRVVLLTGSQEEDRKRSTRRHIAQGNAHLVIGT
                     HALIQEKVDFHKLGMVIVDEQHRFGVMQRFRLMKKGDAEPDTLVMTATPIPRTLALTL
                     YGDLDTSILDELPPGRTPIGTKKVSDERAQEVWDFVKKQVKAGRQAYIVYPVIEGTAA
                     EQPEMEFAQGPPTGGKSGLKAAEQMFEELRSKIMPELHVGLLHGRLDPEVKDRTMREF
                     QAGEIDVLVSTTVIEVGVDVANATVMVIEHAERFGLSQLHQLRGRIGRGAAKSYCILM
                     TGGKISPEGEERLKIMVRTTDGFEIAERDLELRGPGEFFGTKQAGMPGLRVANILRDR
                     KLLELARDEARKIVEETDPEITLRDRDVIMHHLRQHWQRRYGLVEVG"
BASE COUNT         2959 a         4427 c         3935 g         2905 t
ORIGIN      
        1 gtacgcatga aaaatgagaa gtagcaaacc acagggatcg cgaaaagcag ggcatcaatt
       61 cgatcaagaa tgcctccatg gccgggaagg agcgtaccag aatccttcac acccgccccg
      121 cgtttcagcg cggactcaaa gaggtccccg aactgagctg caatgttcgt aagcagaccc
      181 agcaatgccg ctgcgatggg tgttaaccca tatggttctg atggaggttg accagcggca
      241 actccgtccc acatcccact gttcagccat actgcaatcg agaactgaaa gtggaacgtt
      301 aaaagggcaa caagcatgct ggccatgacc gatgcaatgg cgccttccca acttttgtta
      361 gggctcacta ccggcgcaag cttgtggcga cctatgctcc gtcccacata gtaagcagct
      421 atgtccccag cccacaccga gaacaaggtg aaaactacca gaactctaag atgaacgtcg
      481 gaacgcagac ttacgagcag cgccagcgac cctgcgatgt agaacacccc aaaaatagaa
      541 acggcaacgc tggccatgcc agatgcgagg tcttttcgga acacaagcgg aatcccaaaa
      601 atgagcggag ccagtaatgc aggcatccac atcagcgccg taatgtgaaa ttgagcgctg
      661 cctgatcttg gctgcgagag aaccgatatc aaaatcagca aggccacgga gactgcatag
      721 gtgagcttgt gaaacggttt cactcccgcc gtctccgcaa tccccagata ctcatgcagc
      781 cccactacga tgatccccgc tactgccagc gcaaacagcc acagcggcgc cttaaacacg
      841 atcagcaaca ccagcggaat cagcactacc gcagtcagga ttcgcttcat ttcgtatggg
      901 aatgcgccgg aactttggga tgcgtgccgt tgagcacggg ctcgttcagt ccgccgtaac
      961 ggcgctcgcg cttctggaat tcctggatcg cctccagcag gtgcagcccg cggaagtccg
     1021 gccagagcgt cttagtcacg tagatctcgg cgtaagccgc ctgccacagc aggaagttgc
     1081 tcagccgcat ctcgccgctg gtgcgaatca ccaggtcgag ttccggcagg ttcttggtat
     1141 agagatgctg gttgatcagg tcttcgtcaa tcttcaaatg ctcaatgccg ccgttgttcg
     1201 ccgccgcgtt cacaatcgcc ttcaccgcat ccacaatttc cgatcgtgag ccgtagttga
     1261 gggccagcgt cagtaccatg cccgaattgc gcgacgtctg ctccttggcc catgccatac
     1321 gctcctgcac ttcctgcggc agcaggtgca cccggccgat gaactgcagc cggatattgt
     1381 tgcgttgcat caggtcaagt tcattcttca ggtagcgatg cagcagcttc atcaggaagc
     1441 tgatttcgcc cggcgggcgg cgcagaaaat tctccgccga aaacgcgtac agcgtcaccg
     1501 ccggaaggtg aatgcgcgcg gccgtctcaa tcacgtaacg cactgactcc acaccccgcc
     1561 gatgcccggc gatgcgcggc aggtgacggc gcttcgccca gcggccgttg ccgtccatga
     1621 tgatggctac gtgtttgggg aactggctcg gatccagctg gctgtagagt tcagcctctt
     1681 tgcggtccag cccttcgggg atcgtgcgca aaactgcctc tcatgatcta gtgtatacgc
     1741 cgcgcgtatg ggagcggttc gtcgcctgga gttggccctg caacctgcgg ctctgctcta
     1801 tttatcgtac tctaaacccc tgtttcacga aggagtttct gccggtcacc ggctggtcca
     1861 ctccggggcc actgccccgg cgtaatttgc cgctcttgat tctgcttctt gcctgctgtt
     1921 ctgggcgggg tgtatagtct gcttctatac tggcgtaatc cgtgtgttag tcaataacac
     1981 tcaattcggg aagagcagcc tctggcgctg gactgcgttc acttgcatcc tgctggtcgt
     2041 actcatgacc ggcgtggagt ctgtccatgc ccactccggt gtagccgatg gacgcgcctc
     2101 aagctcgtgc gccatttgca tttcagccca cgcaaacgcg cctgttgtct cttatcatcc
     2161 tttgccgaca ttggccgccg ttgccatggt ggctgtgcct ttccagtccc agggcaaggg
     2221 aatctccgcc gaactcagcc tcttcatccg tcctccgccg gcagcttgat cctgttctgt
     2281 tgattcaagc gtagatcctt taaatccggt cctcattgga ggggaactga tgtttcgggc
     2341 atccctcttg cttgcagctt ttctgccggc gaatttcgta ttcgggcaga ccacattttc
     2401 gattgcctcg cctcccgcgg ctggcgcgca aaccgcaccg cagcagcagg cgccggccgc
     2461 accgccgtcg cgcccgcctg ctcccgcgcg gatgatcacg ctggatgaag ccatcacgct
     2521 ggccattgcc agcagcccgt cgctaaaggc cagccagacc caaatccagc agaatcaggc
     2581 gcaggagatc accgccaacc tgcggccgaa cccgaccttt cagggtgact cccagttcat
     2641 cccgttcttt acccccagcc agctgacgca gaacgtggag caatatgacc tcggcgtggg
     2701 ctacaccttt gagctgggcg gcaagcggca caagcggctt tcggccgccc gcgaccagac
     2761 cgccgtcacc gctgcccagg tggccgacac agaacgcgcg ctcaccttca acgtggccca
     2821 gcagttcatc aatgtccttc tcgctaaatc gaaccttcag cttgccgagg atgacctgaa
     2881 aagcttccag cagacggtgg acataagcca ggaacgttac cgcgccggcg acattagtga
     2941 aggcgattac ctcaagatca aattgcagat gctccagttc cagaccgacg tgaccacggc
     3001 gcgcgtggcc aaagtacagg cccagagcag cctgcgccag ctgatcggat acgctgccct
     3061 gcctcacgac tatgaagtcg caggtgacct catctaccag ccactcaaag cgaggctgga
     3121 agaccttcag gccaaggctc tgcaggaacg acctgatctg cgcgctgccc agaaaggcat
     3181 caccgccgga aagagccaga tcacccttgc aaaagccaat ggcgtgccgg atctgaattt
     3241 ttccaccaac tactcgcaca cgccgggtct gaactcgctt tcctggttcg tcagcattcc
     3301 cattccggtc ttcgatcgca atcagggtga gattgcccgc acgaaattcg ctctcaccca
     3361 gaaccagctc acggccacag ctgccgaaga taccgtgatg actgacgtcg cgaatgcctg
     3421 ggagtcagcc gcgagcaatc aggaagttct ccagctctac gaatccggat acctgaagga
     3481 cgcccaggat tcgcgcgaca tcagcgccta tgcctaccgg gccggcgccg ctgcgctgct
     3541 cgactttctc gactccgagc gcagttaccg cgccacgcag cttgcttatc gccaggcgct
     3601 cgccgcttac atgctcagcc ttgagcagct tcgccaggcc gtaggcacaa ggagcttgcc
     3661 atgaagcgca aactcagttc tctcattcgc ggcgaaaaca tcgccatcac cctcctgttc
     3721 gcgagccttg cgctcatgac ggcctgctct ggaggaagtc ccaaagcaaa gaccgacgac
     3781 tcgagcggtt ccggcccgaa tcctgattta ttcacggttc ccaaagacca actcgggcac
     3841 atccaggttg taaccgtgca gcccacggaa tttccccgta ttctccggct cacgggagct
     3901 gtggcattca acggctttct caccacgcct gtgattacgc aggtgggcgg tccggtgagc
     3961 cgcatcatcg tttctcccgg gcagcaggtc cgcaaaggcg aaccgatgct ctacgtcagc
     4021 agcccggact attcgcagct gcgcgccaac ttcctcaagg cccgggacgc gcactcgctg
     4081 gcgcacaaga actatgttcg cgctcaggac ctgtacgcgc atcacgccat cgcagagcgc
     4141 gatctgcagg ccgcagaatc ggcagaaatc caggcgcagg ctgatcttca atcggcggag
     4201 cagtcgctta agatccttgg tattcccaag ccagaaactt tggctgagca ccccgtctcg
     4261 ccggaggtgc ctctgatcgc gccgctcacc ggcgaagccg tggagcgcct gtgcgccccc
     4321 ggtcaactca tccaggccgg cgtaacgcaa tgcttcacca tctctgacat gaagaccgtt
     4381 tgggtgctgg ccaacgtcta tcaggaccag ctcgcttacg tgcatgtggg cgacccggtg
     4441 accatcagga ccgatgcgta tcccgattta tttcacggcc gcatctcctt catgggagca
     4501 gcgctcgacc caacctcgcg cactcttcag gctcggattg atactgcgaa tacaaacggc
     4561 aagttgagaa aggatatgta cgtcacggcg accgtggttg caggcaagat cagcaacgca
     4621 ttacttgtgc ccgactcggc agtcctgcgc gacgccgaga acgagccgtt cgtttacgtg
     4681 gaagtgggcc aggcacagtt cgcgcgtcga ccggtaaagc tcggcgccag cgatggcggc
     4741 aaaacacaga tcgtcagcgg gctcaagccc ggagagcagg tcgtgggcga tggaagcctc
     4801 ttcctgcagt ttgcgaactc ggggcaatga ttgactcact agccgcgcgg aggcatagcg
     4861 aggtgtgaac gttgagcgga gcgacttgtg aagagcgtaa tagccgaacg aagccgggca
     4921 cgcgctgagt tcggctgcta caggagcctc caagtcttat tcgaagcgat gcaacttagc
     4981 ggtttggagc ggagcgacat aaaacaagga agaacgtagc cgaacgaagc cgggcacgcg
     5041 ctgagttcgg ccgctgcagg agcctctcac tttcggcaac gaagaggatg tgcagcggtt
     5101 tggagcggag cgacataaat aaatgattca tcgaatagta caaatggctc ttcgccagcg
     5161 ctttctcgtg ctggcgctgg tgctgttgct catcgtcgcc ggaaccgtcg cattccagcg
     5221 catgccggtg gatgcctacc ccgacctcgc tccgcccatg gtcgagatcg tcacgcagtg
     5281 gcctggccat gcagccgaag aagtcgaacg gctgatcacg cttccgctgg aagtggaatt
     5341 ttcgggcgcg cccaagatgg aggtgatgcg ctccatctcg ctctatggcc tctctgacat
     5401 ccgcctgaca ttcgaggtcg ctacagacaa ctactttgcc cggcaggtaa tcttccagcg
     5461 catcggcgat gcgcagcttc cttccggcgt aacgcctagc atggcgccgc tcttcagccc
     5521 gagcggcctc gtctatcgct acgtccttga aagccctgac cgcagcccgc aggagttgaa
     5581 gacaattgaa gactgggtgg tggagcgtgc ctaccgctcc gtacccggcg ttgccgacga
     5641 ctccggtctg ggcggcaccg tgatgcaata ccaggtgctg ctcgatcccg cacgcctcta
     5701 cgggtaccac atgacggtgc agcaggtcat gcaggcgctc tccaataaca actcaaacgc
     5761 cggcggagga ttttattcgc agggcggtca gttctattac gtgcgcggcg tgggcctggt
     5821 ccagaacacg aacgacatcg gaaacatcat tgttgccagc gttaaaggca cacccatccg
     5881 catccgcgac gtcggcgatg tgaccattgg ccacgctccc cgtctggggc agttcggctt
     5941 ccagacccac acttccaacc aggatgacgc ggtggaaggc atcatcctga tgcgccggga
     6001 tgagcagacg caagaagtgc tcaaagcggt gcagaagaag actgacgatc tgaacaactc
     6061 agtcatgccc aaggacgtaa agatccgtcc gttttacgac cgcagcgaac tggtcaagct
     6121 gaccacggac accgtggaag gcaacctggt gcgcggcatg attttcgtca tcctggtcct
     6181 gcttttcttt ctgttcaata ttcgcgccgc cattatcgtc tcgctcacca taccgctaag
     6241 ccttctgttc gcgtttgtgg tgctgcatgc gcgcaacgtc tccgccaacc tgctctccat
     6301 cggcgcaatt gatttcggaa tcatcattga cggtaccgtg gtcatggtgg aaaacatcta
     6361 ccgcgaattg gccgagcgcc acggccagga atacaaactt actgacgtga tcctggcggc
     6421 cgcggccgat gtcgatcgtc ccatcttcta ctccgtcgcc gtgatcattg ccggctatct
     6481 gcccatttac gcgctcagcg gcccttcggg aaaactcttc cacccaatgg ccgataccat
     6541 gtccttcgcg ctgatcggcg cgctgcttct gacgctcact ctggtgcctg tacttgcctc
     6601 ttactggttc aaatccggaa tcaaagagaa gaccaaccat gcgtttgaat ggatcaaagg
     6661 catttacaca cgccagcttg atttctgcct ggaacatcgc cgcctcacgc tgaccgtggc
     6721 agtactgcta ttcggagtca ctctcatcct tgttccatac atcggcggcg agttcatgcc
     6781 tcacctggac gaaggtgcgc tgtggttccg cgccaccatg ccgtacacaa tctcgtttga
     6841 agaatccagc aagatcgtgc cgcaggttcg caatattctc atctcctacc cgcaggttac
     6901 cgtcgtcggc tccgagcacg ggcgcccgga tgacggcacc gatcccaccg gcttcttcaa
     6961 tgcagagttc tacgttgggc tgaagccata cggagataaa tcctggaagg gtgaaatcga
     7021 caccaaggaa aaactggttg aagccattga taaacggctg aaggcgttcc ccggcatcat
     7081 tttcaatcac actcagcccg ctgaagatgc ggtcgatgaa gccctcaccg gcctaaagag
     7141 ttcgctggcg gtaaagattt acggcactga ccttcaggtg ctggagcaca aagcactgga
     7201 aatcaagaaa gtgctggaag ccgttccggg cttcaccgaa cttaccgtgg tgcgcgagct
     7261 cggccagcca agcctgaaca tcaacgtgga tcgcgaaaag atcgcgcgtt atggcatcaa
     7321 cgtgtcagac gtggaggcgg taattcaggc agcagttgga ggccaggcag ccacgcaggt
     7381 tgttcaggga gaaaaactgt tcgatctcgt cgtccgcatg cagccgcagt tccgcagcaa
     7441 cgccgagcaa atccgcaact tgctggtggg cacaccagac gggcagcaaa ttcccatcag
     7501 ccagttggca agcgtcgagc agggcaacgg tgcgtcattt atctatcgtg aaaacaactc
     7561 gcgttatatc ggcgtgcagt acagcattga gggacgtgac ctgcagcgcg ccgtagaaga
     7621 cgggcaggct gcggtgaaaa agaacgtcac catacccgcc ggttatcgga cggaatgggg
     7681 cggcgaatat gaccagttcc tggccgccaa gcagcagctc agcgttattg gaccgctggc
     7741 cgtgctgctg atcttcttta tcctgttcgc tctctacggc aatttcaaat tcccggccat
     7801 catcgccctt gacgtggtgc tcaccgaacc ggtgggtgcc ttgatcgcgc tcaagctcac
     7861 gcacacgccg ttcagcgttt cgtccgtgct gggcttgctg gccctgatgg gagtctcagt
     7921 tgaaactggc gtgatcctgg tttcctatat caacaaaatg cgccgtgaag gcatggacat
     7981 ccccacagcc actcgcgaag ccgcgttgct ccgcctgcgg ccgatcatga tgaccgcact
     8041 agtggcctgc ctcggcttgc tcccggctgc gctttccacc ggcatcggct ccgatacgca
     8101 aaagccattc gccatcgtga ttgtggccgg attgatctcg cgacttttcc tcggcttctt
     8161 cgtcaacccg gtgctctacc gcacagtggc gcgcgaaggc gacgttctgc aggtgtgatg
     8221 cgggagtgag attctcacgt aagagttaat ttacggttgg aaaatgcgag actgatcaca
     8281 aacatcgctg cgccaaacat gacgatggct ggagcgggag tgctcatctt ccacactgtc
     8341 gagctggcca gatacccaag tagcacggca gtcacgcttg cgctggcgga agccgcgagg
     8401 aatcccgcga tattactggc cagctgcctg ccggtcgcag ccggcaaaat caggagcgcg
     8461 ctggccagca gagctcccat gtagcgcagg cccaccagca ccaccaggct gaagagcagc
     8521 aaaaaataca ggtcaagcag gcgcaccttc acgccggaag tggctgccag ctcaggtgaa
     8581 aagattgaga gtaccagccg gtctttcaat agaaacagcg cgacgatcac accggcgaca
     8641 gccaccgctc ccacgaagaa gctggtcagc gaaatccgct gaaaagaacc gaacaacgcc
     8701 tcaagaatat cttctctggg tgtgatggat gcgccgattg ccactgccgt ggcgaacacc
     8761 accccgatgg ctgcttcaac ggcaaggccg gacttggtct gaagtcgcca gattaacagg
     8821 gttcccagga aaagcgccgc tccgccgccg accagcggat tgatcttcaa taaaaatgcg
     8881 attcccaggc ccggcagcgc aagatgtgag attacatcgc tggccagcag catgcgtttc
     8941 atgagtgcga agctgcccac aaggcccgct gccacgccga tcagcaacgc cagcaagagc
     9001 gcatatagtt cgccggcgct catcaatgct cctccacgtg ctggtagtag cggggcggcg
     9061 cggagtagag atcttccagc agctccgggg taagcacatc gcgcggagcg cccatgcagg
     9121 gatgcccttt gctcaggcaa agcacggtat ccgcatagcg gtagacaatg ctcaggtcgt
     9181 gggagatcag gatcagcgtg attccgcgct caatctgcag atcgtgaagc agttcgtaaa
     9241 tgcgttcttc cgtgatctca tccaggctgg ctgtgggttc atcgaacagg agaacattcg
     9301 gccgccctac cagcgcaaac gcaatcagcg ctttctgaaa ctgtccgccg gagagcacgc
     9361 cgatgcgcgt atcgagcagc tccgggccca gccccacgcg atcgcatacg gcgtgcagct
     9421 cgtcttcacg cacattcagc agtttcgctt tcgcgtgcag cagatcgcga aaatgtatcg
     9481 gaatctggcg gtcggcggta atgcgctggg gcacatagcc gagccgcgtt tcgtgactcc
     9541 agagaacttc tccgcgataa gcaaccaacc ccatcagagc gttcagcagc agagtcttgc
     9601 ctgcgccatt cgggccaata atcgccaggc agccccccgg cttcacctca aaggtgaggt
     9661 cgcgaatgat cgacctgcct ccggcctcaa cgctgagatc gcgcacggaa agcaggggct
     9721 cgagttgggc tttgtactcc accacgccct caggcacatc taactacgat gtcctgccag
     9781 cggccgatgt tcccggcagg ttgaaacggc gcgcagcctg agctcccggc ccgcagcagc
     9841 tcttgtgctt gcgcggtggg ctagaattaa cctatgcagt ccaaggcgag cccggaagtg
     9901 attcaggcct ttgccgctct agtggattcg aaggtagctg acgaacgcct cgacctgtta
     9961 cgcgctgccc tcacgttcgc acgcatcgag tatccagaaa ttgacgttga actttatctc
    10021 cggcgcgtgg aggcgctcgc gcggcgcgcg aaagcacgca tttccgatta cgacgagcct
    10081 tctgagtgca tttctgccct gaaccacgtc ctttttgaag aagagatgtt ccgcggcaac
    10141 accgtggact actacagccc gcgaaattcc ttcatcaatg acgtgcttga tcgccgactt
    10201 ggtattccca tttccctcgc gcttgtttat atggaagtcg gccgccgcgc gggcttcccg
    10261 ctgttcggcg tagggatgcc gggccacttc ctgttgaagc attacgccgt ggacggtcag
    10321 gccattctga ttgacgcttt cgagcgcggc tccattgtga gcgaggaaga ctgccgccac
    10381 aagattgaca gcatttactc cgggcagctc accctccagc ccgagttcct cctcaccgtc
    10441 acgccacgcc agatgctcac ccgcatgctg aacaatctac ggacaatcta cctcgcgcag
    10501 cgcgacttcc gccgcgccgt gcaggtggtg gacctcatcc tggtgatcta tccgcgttcg
    10561 ccggaagacg tgaagcagcg cgctgccctg cgctacaacc tgcatgacta tcgcggggct
    10621 ctgtctgatt tcgaggagta cgtcaggatg gcgccggaag cctctgacgc tgaagaaatc
    10681 cgccagaccg ccctgggcct gaggcgatcc atggcgatga tgaactgagg gattgccagg
    10741 attgccagag ttgcccaaag tgatgatttt gagtttccgg tttgaggaac cgtctgcaca
    10801 cgcgatttct ggtcaaagga atatgcctgg tccggtttcg ctaaaaaggt ctcagggttt
    10861 cggtcaggcg gttttcaatc atcatttttg gcaatcctgg caatcttggc aattcaaagc
    10921 agtctgtctc cccgatacac taaccttccc tcaacgattc tggcttcttc cgtaagccgg
    10981 tgttctttcg gaggcttatc ctccaggatg tgcatcaccg tgtgtccctt cgctacaaga
    11041 aaatctgaca ccagcatgcg atggcacctg aaccagagct gctcagcgca catgatggcc
    11101 gttttgcggg cggaggcgcg ctccaccaga cgatcgatcg ccgcctgaaa cttcgacgtc
    11161 agcatgtagt cggcgtaatt gcggaaagat tcgttgcgca atgcgatgtt cggcgattga
    11221 tcagccggca tctgcctttt acgccgaccg ccgaggtccg gctcccagac gtaatcagtg
    11281 ccaacctccg gcagccacag ctccaggtga tcgcgattga aatgcggatg cctccgcgac
    11341 atgggaaatg cccgaatgtc ttcgaggaga agaatttcgt gggtctgcag cagatgagag
    11401 aagctggcta gatcgcgggt ggagtggccg agagtgtaga tggtgggcac gagacttgaa
    11461 atctaaaatt ggaaatttgg aatttcaaat ctcccttaga gctttcacaa taaccagttc
    11521 ctcatcttcg aataccgtcc gcagatccaa cagcacccgc ccttcatcca cacgcgccac
    11581 gatcggcgga tcggctttgc gcaacgctgt tgcgagctcg tccgcgctca acgatttcga
    11641 agtgagagtc agcagaaacg tcggcaaggt tgaagttggc gctgagccgc cgcccaccag
    11701 cgattcgccc ggagtaatcg ccacattcag cttgttcgcg tcactgagtt gctcgcgtag
    11761 cgcttcagcg cgcgttctga tcacctccgg ggtcagccgc atcatgcgca gcaaaggaat
    11821 tgcgtcgtgg ttctgccgga tgtactccat cagcgtggct tccagcactg agtacgtaag
    11881 cttgtcgacg cgcagtgcgc ggaacaacgg attggaacgg acccgcgcga tcagctcttc
    11941 gcggccgctg agcacaccag cctgcgggcc gcccagcatc ttgtcgccac tgtaggtcac
    12001 cagatcaacg ccggcgcgaa ggctgtctgc cacgccgctt tcgttcacac ccatgctgcg
    12061 cagcgggacc agcgcgcctc cgccaaggtc ctccatcacc gggatcttgt gcttgtggcc
    12121 gagttcgcag agctcttcca gttgcggctg ctcggtgaac ccgataatgg caaagttcga
    12181 tcggtgaacg cgcagcagca gccgcgtcct ctcattgatt gcgcgctcgt aatcctggac
    12241 gcgtgtccgg ttggtggtac cgacttcgcg taacgtcgct ccggacttgc tcatcacgtc
    12301 cggcacgcgg aaggacccgc cgatctccac cagctcaccg cgcgaaacga ttacctcgcc
    12361 gccttcggcc agcgtgttca gcgccagcat caccgcagcg gcgcagttgt tcaccactac
    12421 actgcgaatc ccgctcaccc cttcctggtt cagcagacgt gagaacagcc gctccacgtg
    12481 tacatcgcgc ttgccccgct gcccttccgc gatatcgaac tccaggttcg agtaccgccc
    12541 ggcaacctcg ctcacgcgct tcagcgccga ttgcgcgagc ggggcacgcc caagattcgt
    12601 atgcaggatt acgccggtgg cattgatcac cggccgcaag gaaaactgca tggcctgccg
    12661 aagctgccgt tcgatggccc tggcaatgcc gtcaaccgta agctttacct gctcgggcgt
    12721 gcttagcctt cccgccgaga tttcttggcg catctgcgca accacggcgc gcactgcctc
    12781 agtgaccgca ggctgccctt cgcgcgcgat catcggcgcc agataagggc tgtgcagaag
    12841 ctcgtctact gctggtaaga gacggtaaag ctcggatttg gatgaagtcg gcatttttct
    12901 tgtcccgagc gtagcgaggg aaccctatgg ttgcaatgac tgaccgggta acccgcgcaa
    12961 ttctaatttg ccagccacac gcggtcggtt ccagcttgat attccgctcg tgcgatggct
    13021 ctttctattg atcctataag agaatagggt tccctcgctt cgctcgggat gtgaaaacag
    13081 ctagccaacc tccaccagcc catatcgcct ctgccagtgc tgccgcaagt gatgcatgat
    13141 tacgtcgcgg tcccgtagcg taatttccgg atcggtttcc tccacgatct tccgtgcctc
    13201 atcgcgggcc agctccagca acttgcggtc gcgaaggata tttgccacgc gcagcccggg
    13261 catgcccgct tgtttcgtac cgaagaactc gccgggaccg cgcagctcca ggtcgcgctc
    13321 ggcaatctcg aacccatccg tcgtgcgcac catgatcttc agacgctctt ccccttctgg
    13381 ggaaatcttg cctccggtca tcagaatgca atacgacttg gccgcgccgc gaccgatgcg
    13441 cccacgaagc tggtgcagct gagagagtcc aaagcgctcc gcatgttcaa tgaccattac
    13501 cgtggcattc gcaacgtcca caccgacttc gatcaccgtg gtggaaacca gcacgtcaat
    13561 ctcccctgcc tggaactcgc gcatggtacg gtctttcact tcaggatcga gccgcccgtg
    13621 cagcagcccc acatgcagct ccggcatgat ctttgagcgc agttcctcga acatctgctc
    13681 cgcagctttg agtccgctct tgcctcccgt gggagggccc tgggcaaact ccatctccgg
    13741 ctgctcagca gcagtgcctt cgatcaccgg ataaacaatg taggcttggc gtcctgcctt
    13801 gacctgcttc ttcacaaaat cccagacttc ctgcgctcgt tcgtcggaaa ccttcttcgt
    13861 gccgatggga gttcgtcccg gcggcagctc gtcaaggatg ctggtgtcga gatcgccgta
    13921 aagcgtgagc gccaaagtcc gcgggatggg agtggcggtc attaccagtg tgtccggctc
    13981 ggcatcgccc ttcttcatca gccggaagcg ctgcatcacg ccgaagcggt gctgctcgtc
    14041 cacgatcacc atgccgagtt tgtggaagtc caccttctcc tgaatcagcg catgagtgcc
    14101 gattaccaga tgagcgttgc cttgcgcgat gtggcgtcgc gtgctgcgct tgcggtcttc
    14161 ttcctgcgag ccggtcagca acaccacccg atagccggcc ggctccagca cgcgccgggc
    14221 cgagag
//
LOCUS       DASQYP010000014         5388 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_21681, whole genome shotgun sequence.
ACCESSION   DASQYP010000014 DASQYP010000000
VERSION     DASQYP010000014.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 5388)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5388)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5388
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_21681"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..807)
                     /locus_tag="VE783_00480"
     CDS             complement(<1..807)
                     /locus_tag="VE783_00480"
                     /inference="COORDINATES: protein motif:HMM:NF012335.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-binding dehydrogenase"
                     /protein_id="HYX51897.1"
                     /translation="MKAAWISRSGGPEVLEIREIEKPRPGEAHVLVRVRASGLNRADL
                     LQRQGKYPPPPGYPPEIPGIEFAGEVAELGPGVRRWQPGQRVFGLAGGAAHAEFLAIH
                     EDLLANVPDKMTWAAAAAIPEAFITAHDALWSQADLRPGETVLINAVGSGVGLAAVQL
                     ARAIRAVPFGTSRTPDKVEQAKQYGLEEGIIVGDTFDDLISAAEKWTGGRGINVFLDL
                     AGGGYPAAAQKLLAPKGRMMLVGTVAGGRYELEARYMLSKRIQVRGTVLRA"
     gene            950..1324
                     /locus_tag="VE783_00485"
     CDS             950..1324
                     /locus_tag="VE783_00485"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX51898.1"
                     /translation="MYEDFHAIDRWTGHKLHCVYQALIVAIATRHADAIDVKFLASGR
                     PVWIALPHPTWVEYKKQTGRVITDPLAIQTAGHFLKTAIEDGSYEHGREMYTLTVEEA
                     LVHLNAVLNEVGAPEDALVKTA"
     gene            1418..3010
                     /gene="pckA"
                     /locus_tag="VE783_00490"
     CDS             1418..3010
                     /gene="pckA"
                     /locus_tag="VE783_00490"
                     /EC_number="4.1.1.49"
                     /inference="COORDINATES: protein motif:HMM:NF006820.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004612 - phosphoenolpyruvate
                     carboxykinase (ATP) activity [Evidence IEA];
                     GO_process: GO:0006094 - gluconeogenesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate carboxykinase (ATP)"
                     /protein_id="HYX51899.1"
                     /translation="MSQTIPAIDSASALETLLKTNTVHRNLHSGLLVEHAIRRGEGLL
                     ADNGALVAYTGKFTGRTPKDKFTVKDEITRDLVNWGDVNQSFDPEKFDALFERVLEFL
                     RGRELYVQDLYAGADPKYQLPIRVINQYAWHNLFVRALFVRPTHEQLKTHSAEFTIIS
                     APEFQADPQRDGTRSEAFIIVNFTRKIVLIGGTKYAGEMKKSIFGVMNFLLPQRNVFP
                     MHCSANVGKNGETALFFGLSGTGKTTLSADPERLLIGDDEHGWSPTGIFNFEGGCYAK
                     CIKLSKENEPQIWNAIRFGSVLENVTLDERTHVPDYNDDSRTENTRAAYPVDYIEGAV
                     IPGTGGHPKNVIFLTADAFGVLPPISRLDNEQAMYHFLSGYTAKVAGTEAGVKEPQPN
                     FSTCFGSPFLPLRPKVYAEMLGKRLQEHNAQCWLVNTGWFGGPYGVGSRMKLKYTRAM
                     VNAAIEGQLNDVEFEKDPAFGLSIPKAVPGVPAEFLHARDAWSDKAAYDKAAADLSTR
                     FGKNFEKFDVPEKIRAAGPKRG"
     gene            3148..3867
                     /locus_tag="VE783_00495"
     CDS             3148..3867
                     /locus_tag="VE783_00495"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX51900.1"
                     /translation="MKRCAILLALLVWSCVAFAQTGQQQDSFTTLNGGIRLRAIAGVP
                     FSADMVKETIKILPDGSQVPVITKGKLFRDPDGRTRTEVEIATAGGVLQRVTIVDPVQ
                     RIIISLDAMARTALVTPMPATASTVAPAKVSAAVRKARNASGTEPLGVQSMESFEVTG
                     SRRTLPAAAGGSANHMGKSTVEAWFSPELKIELEVRTVEPGASDTVTRLQNIVTASPD
                     AALFQVPADYKAAVRQEGASR"
     gene            3864..5219
                     /locus_tag="VE783_00500"
     CDS             3864..5219
                     /locus_tag="VE783_00500"
                     /inference="COORDINATES: protein motif:HMM:NF013508.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX51901.1"
                     /translation="MSRTKRFLDKAALVTLILGSVFTGAWAQSPPTITKAFSSATVGL
                     NQSVTLTFTLINPNPATDLTGVSFSDDMPAGLLIANPDSLGGTCDTSVVILSPTNISL
                     AGAVLPANSSCTLVIDVLAMTAGDQVNTTDPITSVEGGTGGTATATVTVVEADLAVTM
                     SHTGTFFRPQSGATYTITVSNVGGADTSALITVDDNLPAGLTATSLQGPNWNCTLSPL
                     QCTRGDTLFAGTSFEDITLTVDVAANAPSSLTNSVTVSGGAESNTANDTASDLTQAIA
                     ALGMTAQTSSLTVTAGGSASTVLNVALNGSGLGTISFACSGLPSGALCNFNPASIAAS
                     GPVTLSISTTAKSTTLAPFVPPGSFLPIAAFAMTVAVLALSLGFRRFRKALQFRARVM
                     VAGAFACLALLVLVGCGVSMNTPVQHSPGTPAGTSAVTVTASSSNGGATATSTVNLTV
                     Q"
BASE COUNT         1091 a         1554 c         1661 g         1082 t
ORIGIN      
        1 ggcgcgcagc acggtgccgc gtacctgaat acgcttgctg agcatgtagc gcgcctcaag
       61 ttcataacgt ccgccggcca cggtgcccac cagcatcatt cttcctttag gagcgagcag
      121 cttctgggcc gcggcggggt agccgcctcc agcaaggtcg aggaagacgt taatgcctct
      181 gccgccggtc catttctctg cggcggagat cagatcgtca aaggtatctc cgacgatgat
      241 gccttcttcc aaaccgtatt gtttggcctg ttcgactttg tcgggagtgc gtgaggttcc
      301 gaagggcact gctcgaatcg cccgcgcaag ttgcaccgcg gccaaaccca ccccgctccc
      361 tacggcgttg atcagcactg tctcgcccgg gcggaggtcg gcttgcgacc atagagcgtc
      421 atgggcggtg ataaaggcct caggaatggc ggctgctgct gcccaggtca tcttgtccgg
      481 cacgttcgcc aagaggtctt catggatagc taaaaactcg gcatgggcgg ctccgccagc
      541 caggccgaag acgcgctgtc ctggctgcca gcggcgtacc ccggggccga gctcagccac
      601 ctcgccggca aactcaattc ccggaatttc cgggggatag ccgggtggcg gtggatactt
      661 accctgtcgc tgaagcaggt cagcccggtt caggcctgag gcgcgtaccc ggacgagtac
      721 gtgtgcctcg cccggccggg gcttctcgat ctcgcgaatt tccaggactt caggtccccc
      781 agagcgggaa atccaggctg ctttcatgct tcttctcccc ttgcggcagg gtatattttc
      841 ccattttccc ggccagatgc cggggttgtg accagaatca cataagccgg gggtcgcccc
      901 cgttatcatt gcctgtgctt tcgggctccg atatattcta ggcacctata tgtacgagga
      961 ttttcacgca atcgaccgct ggacaggcca taagctccac tgtgtttacc aggccctgat
     1021 tgtggccatc gcaacccggc acgctgacgc cattgacgtg aaatttttgg ccagcggacg
     1081 accggtatgg attgcgttgc cgcatcctac atgggtggag tacaaaaagc agaccggacg
     1141 ggtaatcacc gatccgctgg caatccagac ggcagggcat ttcctgaaga ccgccattga
     1201 agatggaagc tatgagcatg gccgggaaat gtacacgctg accgtggaag aagctcttgt
     1261 gcatctaaat gctgttctca acgaagttgg cgcgcctgaa gacgcgctgg taaagacggc
     1321 ttgatgccgt caatttgaat cagccccaag ccggtctctg ccctgtcctt tcctgctgac
     1381 aggacgcttc ggtttttggg aacaggagat ccaataaatg tctcagacca taccagccat
     1441 tgattccgct tctgctctgg aaacacttct caagaccaac acggtgcatc gtaacctgca
     1501 ttccggactc ctggtggaac atgcgatccg cagaggcgaa ggcctgctgg cggacaatgg
     1561 tgcgctggtt gcctacacgg gaaagttcac cggccgcacc cccaaagaca aattcaccgt
     1621 gaaagacgag atcaccagag acctggtgaa ctggggcgac gtgaaccagt cgtttgatcc
     1681 ggaaaagttt gacgcgctgt ttgagcgcgt cctggaattc ctgcgcggcc gtgagcttta
     1741 cgtccaggac ctgtatgccg gcgcggaccc gaaatatcag ctgccgattc gcgtgatcaa
     1801 ccagtacgcc tggcacaacc tgtttgtgcg cgcgctcttt gtgcggccca cgcacgaaca
     1861 gcttaagacg cacagcgctg agttcaccat catctccgct ccggagttcc aggcggaccc
     1921 gcagcgggac ggcacccgct cagaagcatt cattattgtg aactttaccc gcaagattgt
     1981 gctgattggc gggaccaagt acgcgggcga gatgaagaag tcaatcttcg gagtgatgaa
     2041 cttcctgctg ccgcagagga acgtgttccc catgcactgt tccgcgaatg tggggaaaaa
     2101 cggcgagacg gctttattct tcggtctttc aggcaccggc aagactacgc tttcagccga
     2161 tcctgagcgc ctgctgattg gcgacgacga gcatggctgg agcccgaccg gcatcttcaa
     2221 ctttgaaggc ggctgctatg ccaagtgcat caagctctca aaggaaaacg agccccagat
     2281 atggaatgcc atccgcttcg gctccgtgct ggagaatgtg acgctcgacg agcgtacaca
     2341 cgtgccggat tacaacgatg acagccgcac cgaaaatacc cgtgccgcct atccggtgga
     2401 ctacattgaa ggtgcggtga ttccgggcac cggcggacat ccgaagaacg tgatctttct
     2461 tacggccgac gcttttggcg tgctgcctcc gatttcacgg ctcgacaacg agcaggcgat
     2521 gtaccacttc ctctccggct acaccgccaa ggtcgcgggc acggaagccg gcgtgaaaga
     2581 gccgcaaccg aacttctcca cctgctttgg ctcgccattc ctgccgctgc ggccgaaagt
     2641 ttacgcggaa atgctgggca agcgcctgca ggagcacaac gcgcagtgct ggctggtgaa
     2701 caccggctgg ttcggcggcc cctatggcgt gggttcgcgc atgaagctga aatacacgcg
     2761 cgccatggtg aatgcagcga ttgaaggcca gctcaatgac gtggagtttg aaaaagaccc
     2821 ggcgtttggg ctcagcattc ccaaggcagt tccgggagtg ccggcggaat tcctgcacgc
     2881 gcgtgacgcg tggagcgata aggcagcgta cgacaaggct gctgccgatc tttcgacgcg
     2941 gttcggcaag aactttgaaa agtttgacgt tccggaaaag atccgcgctg ctggaccaaa
     3001 gcgcggttaa gcgaaaccgg caacagaaaa ttttcggatt cccccgcgat tgcgggggaa
     3061 ttttttttgc aatgaatacc tgatgttcac cttatccgag catggcgaat tgtgagttac
     3121 aatgccgcca ttcttccggg agaaaaaatg aaacgctgcg cgattcttct cgccctgctc
     3181 gtctggagct gtgttgcatt cgcccagacg ggccagcaac aggattcctt cacgactttg
     3241 aacggcggca tccgcctgcg ggcgattgcc ggagttccgt tttcggctga catggtgaag
     3301 gaaaccatca aaatcctgcc ggatggctcg caggttccgg ttatcaccaa agggaagctg
     3361 tttcgcgacc ctgacgggcg tacgcgcacg gaggtcgaga ttgcgaccgc gggcggggtg
     3421 ctccagcggg tgacaatcgt tgatccggtg cagcgaatta tcatctcgct ggatgcgatg
     3481 gcaaggaccg cgctggttac gccgatgcct gcgacggctt ccacagtcgc gccggcaaag
     3541 gtcagcgctg cggtgcgcaa ggctcgtaac gccagcggaa ctgagccgct cggcgtgcaa
     3601 tccatggaga gtttcgaggt caccggcagc cgccgcacgc tgccggcagc cgcgggcggt
     3661 agcgcgaacc atatgggcaa gtccacggtg gaagcgtggt tttctcccga gttgaagatt
     3721 gaactggagg ttcgaacagt ggagccggga gcgagtgaca cggtaacccg gttgcagaac
     3781 attgtcacgg cgtctcccga cgcggcattg ttccaggttc cggcggatta caaagcggca
     3841 gtccgccagg aaggagccag ccgatgagcc ggacaaagcg attcctcgat aaggcagctc
     3901 tggtgacgct aatcctgggg agcgtattca cgggcgcatg ggcccaatct ccgccgacga
     3961 ttacgaaggc gttcagttcg gctacagtcg ggctgaacca gagcgtgacg ctgactttca
     4021 cgttgatcaa tccgaacccg gcgaccgacc tgacgggcgt gagctttagc gatgacatgc
     4081 cggcgggctt gctgattgcc aatcctgaca gcctgggcgg cacatgcgat acaagcgtgg
     4141 tgatactttc accgacgaac atcagcctgg caggagcggt gctgccggcg aacagcagct
     4201 gcacgctggt gatcgatgtg ctggcgatga cggcgggcga tcaggtgaac accacggatc
     4261 cgattacatc cgttgaaggc ggcaccggcg gaacggcgac cgctacggtt acggttgtgg
     4321 aggcggacct tgcggttaca atgtcgcaca ccggcacttt cttccggccg caaagcggcg
     4381 ccacttacac gatcacggtt tcgaatgttg gcggtgcaga cacatcggcg ctgatcacgg
     4441 tggatgacaa tcttccggcg ggtctcactg cgacatcgtt gcaggggccg aactggaact
     4501 gcacgctttc tccgctgcag tgcacgcgtg gtgacacgct gtttgcgggc accagcttcg
     4561 aagacattac actcacagtg gatgtggcgg cgaacgcgcc ttcgagtctc accaactcgg
     4621 tgaccgtttc tggcggcgca gagtcgaaca cggccaacga tacagcgagc gatctgacgc
     4681 aggcgatcgc ggcgctgggg atgacggcgc aaaccagcag cctgacggtt acggcaggag
     4741 gcagcgcatc gaccgtgctc aacgtggctc tgaatggctc cggcctgggt acgatcagct
     4801 ttgcctgcag cgggctgcct tccggagcgc tgtgcaattt caatccggcg tcgattgccg
     4861 cgagcgggcc ggtaactttg agcatctcca ccacggcaaa atccacgact ctggctccat
     4921 ttgtgccgcc gggaagcttc ctgccgatag cggcttttgc tatgactgtg gcagtgctgg
     4981 cgctgagcct cgggttccgt cggttcagga aagctcttca attcagggct cgcgtgatgg
     5041 tggcgggagc ttttgcctgc ctagctttgc tggttctggt ggggtgcggc gtgagcatga
     5101 acacgcctgt tcagcatagc cccggaacgc cggcgggaac gtctgccgtg acggtgacgg
     5161 cgagcagttc aaatggcgga gcgacggcga ccagcacggt gaatttgacc gtgcagtaaa
     5221 agaggttcct ggtcgctatc gccggcagcg caggggttat ctgggatagg ggaagccgca
     5281 actatcggtt aaggccttca gcgcggcggt gcggacggca actcgctgct caagcgcctc
     5341 aatgattgca ggctgcagct tgagcgtggc ggggtcgagt tgtgcgcc
//
LOCUS       DASQYP010000015         3632 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_85173, whole genome shotgun sequence.
ACCESSION   DASQYP010000015 DASQYP010000000
VERSION     DASQYP010000015.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 3632)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3632)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3632
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_85173"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            201..770
                     /locus_tag="VE783_00505"
     CDS             201..770
                     /locus_tag="VE783_00505"
                     /inference="COORDINATES: protein motif:HMM:NF020123.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016209 - antioxidant activity [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_except=(pos:447..449,aa:Sec)
                     /transl_table=11
                     /product="redoxin domain-containing protein"
                     /protein_id="HYX51902.1"
                     /translation="MRKAAVLLLLIFALAAQSLGPRAWAQEKKEAAPPPPEPNIKVGD
                     TFPDFTLLDQNGKKVSLHDFKGKKNVALAFVVFAFTGGUTKEMQNFQQNLQKLESADT
                     QVLGVSMDSPFSNAAWSEKEGYKFPILSDWGGDLTKQIGIFNTQYHAARRVTFLIDKE
                     GKVVEMQKDREAVDPTAVVTSCERRKMKS"
     gene            770..2008
                     /locus_tag="VE783_00510"
     CDS             770..2008
                     /locus_tag="VE783_00510"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HYX51903.1"
                     /translation="MPITSELQQYEITRRAESNRRVLFLLSLAELLGMSLWFTGTAVL
                     PQITPLWHSGLALGSWLTTSVQIGFSAGAITFAVFNISDVFSPIKVFVISALLAAAAN
                     AAFAFVAQDPLTAIIMRGLTGFFLAGVYPVGMKIMAGWFQRGRGLALGIMIGALTVGS
                     AVPHGVNSLGAIAWKNVVLLGSLQAIVGALIVAFGVREGPFAMPKSQLDVAQIFEIVR
                     NRRLRLANLGYLGHMWELYGFWGWIAVILAASANWPRTKYEMGAAAAIAIGAVGCIWA
                     GVASDKLQDQSESARVAQRARVTIVAMLASAACSLVAGLVFHQPGVLLPLTLIWGIAV
                     IADSAQFSTIISEVSDKSYVGTALTCQVALGFLLTAFSIRALASIAAHYGWQWAMASM
                     AIGPLLGIWAMTGLLKPQHF"
     gene            complement(2014..2934)
                     /locus_tag="VE783_00515"
     CDS             complement(2014..2934)
                     /locus_tag="VE783_00515"
                     /inference="COORDINATES: protein motif:HMM:NF013117.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008381 - mechanosensitive monoatomic ion
                     channel activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="mechanosensitive ion channel family protein"
                     /protein_id="HYX51904.1"
                     /translation="MRAIPYPIAIFGSVAVLVLGWIIISVGHKFNDSRARTPKDQYRR
                     DRLLSTVVVVAGAIVIFALWARLFQHTSTFLGIIGAGLAVALREPLLSIAGRVAIFVG
                     HMYTAGDRIEINKMSGDVIDVGFFYTRMMEIGNWISGDQYSGRIIQFANAQIFGSSVF
                     NYTRNFDYIWDEAKLPITYQSNTKAATEILKQVGGEYTKEFMQNAEAQIEKMQRIFMV
                     PRIEVEPLVYLKVTDNWIELVMRYLVAPKKRRAASSYIYDEVFRQIQQRDDIEIASST
                     MTVTVQKPKVEAAPETQQEKEEDQQPRKAA"
     gene            3087..3383
                     /locus_tag="VE783_00520"
     CDS             3087..3383
                     /locus_tag="VE783_00520"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX51905.1"
                     /translation="MRQIVRISVLTALTILPVLGFSQASSGRDLREDEQQLDRLQWQL
                     RHDRERLAFDRRHHASRGRIHEDEEQIRNDKASINSLRADMRRDRRLRHHRYPS"
BASE COUNT          699 a         1073 c         1012 g          848 t
ORIGIN      
        1 tgccagagtc gcgctcgcga gcaaagcaca cgcgatcgca caaacgcgga agattttcat
       61 gtgagagtgc ctcgtggcaa atagtaacac tgcatcgcaa ccagagttgt tggccttcca
      121 ggcagcacga aaacattgcc agtttgcgga cgggaatata gtcttaatac ctgtagttat
      181 aactgcggag gaaagctcgc atgcgcaaag ccgctgtttt gctgctattg attttcgcgc
      241 ttgccgccca atcgctcggt ccgcgagcgt gggcgcaaga gaaaaaggaa gctgccccac
      301 ccccaccgga accaaatatc aaggtcggcg acacgttccc tgatttcacc ctgctcgacc
      361 agaatggtaa aaaggtttcg ctgcacgatt tcaaaggcaa gaaaaacgtg gctctggcat
      421 tcgtggtctt tgccttcaca ggtggttgaa ccaaggaaat gcagaacttc cagcagaatc
      481 tgcaaaagct ggaatctgca gacacccagg ttctgggtgt tagcatggac agccccttta
      541 gcaatgccgc atggtcggaa aaagaagggt acaagttccc catcctgagc gactggggcg
      601 gcgatttgac caaacagatc ggcatcttca acacgcaata tcacgccgca aggcgcgtga
      661 ccttcctgat cgataaggaa ggtaaggtgg tggagatgca gaaggaccgc gaggcggtgg
      721 atcccaccgc agtggttacc tcctgcgagc gcaggaagat gaagagctag tgccgataac
      781 ttccgagctc cagcagtatg agatcacccg ccgggcagaa tccaaccggc gggtgctttt
      841 tttgctctcg cttgctgagc tgctcgggat gtcgctgtgg ttcaccggca ccgcggtgct
      901 tccgcagatt accccgctct ggcactccgg acttgcgctt ggctcatggc tgaccacctc
      961 cgtacaaatc ggcttttccg ccggcgcgat tacgtttgcc gttttcaata tctctgacgt
     1021 ttttagccca atcaaagtat tcgtaatctc tgctctgctt gctgccgccg cgaatgccgc
     1081 atttgccttt gtggcgcagg atccgctcac cgccatcatc atgcgcgggc tcaccggctt
     1141 ctttctggcc ggagtttatc cggtcgggat gaagatcatg gccggttggt tccagcgtgg
     1201 acgcggactc gccctgggaa taatgatcgg ggctttgacg gttggctctg ccgtgccgca
     1261 cggcgtgaac tcgcttggcg cgattgcatg gaagaatgtg gttctgctgg gcagcttgca
     1321 ggcgattgtt ggcgctctga tcgtggcgtt cggcgttcgc gagggcccgt ttgccatgcc
     1381 caagtcgcag cttgatgttg cgcagatttt cgaaatcgtt cgcaaccggc ggcttcgact
     1441 ggcgaacctt ggctatctgg gccatatgtg ggaactctac ggtttctggg gatggattgc
     1501 cgtgattctc gcagcttccg ccaactggcc gcgcacgaaa tatgaaatgg gtgctgcggc
     1561 cgccattgcg attggcgcgg ttggctgcat ctgggccggc gttgccagtg acaagcttca
     1621 ggaccagagc gagagcgccc gcgtggcgca gcgtgcccga gtaaccatcg tcgccatgct
     1681 agccagcgca gcttgttctc tggtggcagg cctggttttt catcagcccg gtgtgcttct
     1741 tccgcttact ctgatctggg gtattgcggt gatcgccgac tccgcgcagt tctccaccat
     1801 catcagcgag gtttccgaca agagttatgt tggaaccgcg ctcacctgcc aggtggcgct
     1861 cggcttcctg ctcacggcat tttccattcg cgcactggcg tcgattgccg cgcactatgg
     1921 atggcaatgg gcaatggctt ccatggccat tggcccgctg ctcggcatat gggcgatgac
     1981 cggcctgctc aagccacagc atttctgatt tgctcacgct gcttttcgcg gctgctggtc
     2041 ttcttctttt tcctgctggg tttccggcgc agcttctact ttcggcttct gcacggttac
     2101 cgtcatggtg ctggacgcaa tctcaatatc gtcgcgctgc tgaatctgcc ggaagacctc
     2161 atcatagata tagctgctcg cggcgcggcg ctttttcggc gcgaccaggt agcgcatcac
     2221 caattcaatc cagttatccg ttaccttgag gtaaaccagc ggctccactt caatccgcgg
     2281 caccataaag atgcgctgca tcttttcaat ctgcgcttca gcgttctgca tgaattcttt
     2341 tgtgtattca ccgcccacct gcttcaggat ctccgtggcc gccttggtgt tgctctgata
     2401 ggtgatgggc agcttggctt cgtcccatat gtagtcaaag ttgcgggtgt agttgaagac
     2461 tgagctgccg aaaatctgcg cgttggcaaa ctgaatgatc cggccgctgt actggtcgcc
     2521 gctgatccag ttcccaatct ccatcattcg ggtgtaaaag aagcctacgt caatcacgtc
     2581 gccgctcatt ttgttgatct caatgcgatc gcctgccgtg tacatgtgtc cgacgaagat
     2641 cgccacccgt ccggcgatgc tcagcagcgg ctcgcgcagc gccaccgcca ggccggcgcc
     2701 gatgatcccc aggaatgtgc tggtgtgctg aaacagcctt gcccagagcg caaagatcac
     2761 aatcgcgccg gccaccacca caacggtgct cagcaggcga tcacgccggt actggtcctt
     2821 gggggtgcga gcgcgggaat cattgaactt gtggccgaca gaaataatga tccagccgag
     2881 caccaggacg gcgacactgc caaaaatcgc gatgggataa ggtatggcgc gcataatagc
     2941 gttgggatgc tccgcggctg aggcattttg cctcgccctg agggctgtac gctggtcacc
     3001 tcccggggca ttattcctgc tactttcccg caaatctgtg ttacaactcg cagcacagca
     3061 gcacaggctt ctccgtgggg tactgaatgc ggcaaatcgt caggatttcc gttctcacag
     3121 ctttaaccat ccttcccgtt cttggctttt ctcaggccag cagcggacgc gaccttcgcg
     3181 aagacgaaca gcagcttgac cggctgcaat ggcagctccg gcacgatcgc gagcgcctgg
     3241 cctttgaccg ccgccatcac gccagccgcg ggcgcattca cgaagacgag gagcagattc
     3301 gcaatgacaa ggcttccatc aacagcctgc gcgcggacat gcgtcgcgac cgccggctgc
     3361 ggcaccaccg ttatccgtcg taaagactct caccgctcaa cgatcttcct cctctcggcg
     3421 caggctccct gaaaatccta agcggcagtt cgtgccgtta tttccgttcg tcattattcc
     3481 gagcttcctg agcggctgcg tggtatcctt tcccgttcca gaacattcaa ttcacttcgc
     3541 acccggagcg catgcctctc atgagactct cttccgctct tcagcgggcc gctgtggttt
     3601 gcctgttcct cactgccaac tgctttgccc ag
//
LOCUS       DASQYP010000016         2289 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_191134, whole genome shotgun sequence.
ACCESSION   DASQYP010000016 DASQYP010000000
VERSION     DASQYP010000016.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 2289)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2289)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2289
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_191134"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            35..844
                     /locus_tag="VE783_00525"
     CDS             35..844
                     /locus_tag="VE783_00525"
                     /inference="COORDINATES: protein motif:HMM:NF024824.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HYX51906.1"
                     /translation="MGRSLFFGLAILFFAVSLLGQQPQAQVQEPVSDPAILLRVPPPP
                     PDATFQELEHRGDELRSQKAYLDAVDYYRAATQKNDTAQLHNKIGIAYFLLHRDRDAR
                     REYQSAIKLNKEYSEAYNNLGALYYNQRRYGPSIKEYKRALKINEENASFHKNLGTAY
                     FSEKDFQGASREYQRAMALDPSIFDRQPSGGVSINLISSNDLGHFHYVMAEMYGQQGN
                     VERCRYYLSKANEEGYPIRDALRDSGFASLRKDPQFVSFLRSLKTPSVDPN"
     gene            complement(1367..1999)
                     /locus_tag="VE783_00530"
     CDS             complement(1367..1999)
                     /locus_tag="VE783_00530"
                     /inference="COORDINATES: protein motif:HMM:NF019887.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD hydrolase family protein"
                     /protein_id="HYX51907.1"
                     /translation="MIADSENRARRIKLILFDVDGVLTDGSIWFMPSAAGGPRSTDAH
                     RAQHGDAPGYGIVSQTFAEAKGFNAHDGTGISLARLGGLKTGMVTKRISETVALRARD
                     LKIDYLFQGADNKSDVLDKILEQSGLIEEQVAYVGDDVIDLPIMRRCGLAIAVANARP
                     QVKAMAHWSTPSQGGRGAARDAVEYILQAQGTLDRVIEAYIQAKTHVELK"
     gene            complement(2109..>2289)
                     /locus_tag="VE783_00535"
     CDS             complement(2109..>2289)
                     /locus_tag="VE783_00535"
                     /inference="COORDINATES: protein motif:HMM:NF012780.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="CBS domain-containing protein"
                     /protein_id="HYX51908.1"
                     /translation="LTAGDCLTANPKTIRPEEFAMTALNMMEQKKITSLVVTDGENRV
                     QGIIHLHDLWGTEMV"
BASE COUNT          468 a          705 c          579 g          537 t
ORIGIN      
        1 cggcgatcgt taaccgcggc tgggaggctc cgccatgggt cgctcgctgt tctttggttt
       61 agctattttg ttcttcgcgg tttcgctgtt agggcagcag ccgcaagccc aggtgcagga
      121 gcctgtctcc gatcccgcca tacttctgcg cgttcctcct cctccacccg atgccacatt
      181 ccaggaactc gagcatcgtg gtgacgagct tcgcagccag aaagcttacc ttgacgccgt
      241 ggactactat cgcgccgcca cacagaaaaa tgacacggcc cagcttcaca acaaaatcgg
      301 cattgcctat ttcctgcttc accgtgatcg cgacgctcgc agggaatacc aatctgcaat
      361 caagctgaac aaggaatact ctgaagccta taacaatctt ggcgctctct attacaacca
      421 gcgccgctat ggtccttcca tcaaggaata caagcgggcc ctcaaaatca acgaggaaaa
      481 cgccagcttt cacaaaaatc tcggtacagc ttatttctct gaaaaggact ttcagggcgc
      541 cagccgcgaa taccagcgtg ccatggctct tgacccatcc attttcgatc gccagccctc
      601 cggaggcgtc tccatcaacc tgatttcctc caacgatctc ggtcacttcc actacgtcat
      661 ggcggaaatg tacggccagc agggcaacgt ggaacgctgc cgttattacc tgagcaaggc
      721 gaatgaagaa ggctacccca tccgtgacgc cctgcgtgac agcggcttcg cctcgctgcg
      781 caaagacccg cagtttgtct cgtttttgcg ctcgctaaag acgccttccg ttgatcccaa
      841 ctgaaggccg cgcggcgcaa aaattcagca acatacgtcg gcaacctttt ccggaattct
      901 gcttctaaac tgaatgtctg ctgcttaaaa gcggcggtac gaaatagcaa acccaccggt
      961 tcggcgcgca agcgtcttgg cagggaaacc ggtgggtttt gtcttttgtc accgcatatc
     1021 tttagggacg tatcgtcggc gttggagtcg gcggagcagg cgtctgcggc tgcgttcttt
     1081 tcccctcata tccgcacact gctgtaagca gcaccgcaat cgctatcgca atcagcatga
     1141 tggctcgctg gcttggccga ttttggcgag ttcctgaaat gtgtttcatg ccgcgatctt
     1201 actaattgga accgctgcac gcgagcgaca atcagcggca aaatcacacg ttttgcggcg
     1261 cgctcagaag cgggcacctg atgagccgca atgctattta gtctgtgcga tttctcccgt
     1321 gctcccggac agctaatagc gaatttattg tttttggggg aacgcttcac ttcaactcaa
     1381 cgtgtgtctt ggcctgtatg taagcctcaa tcacgcggtc cagcgtccct tgtgcctgaa
     1441 gtatgtattc caccgcatcg cgcgcggcgc cgcggccgcc ctgagaaggc gttgaccagt
     1501 gtgccatcgc ctttacctgc ggacgcgcat tggcgaccgc gatagccagt ccgcacctgc
     1561 gcataatcgg gaggtcgatc acgtcgtcgc caacataagc cacctgctct tcaatcagcc
     1621 cgctctgctc caggatcttg tccagcacgt cagacttgtt gtcggctccc tgaaataggt
     1681 aatcgatctt caggtcgcgt gcgcgcagcg ccaccgtctc agaaatgcgt ttggtcacca
     1741 tcccggtctt caggccgccc agccgcgcca gtgaaatccc tgtgccgtcg tgcgcattga
     1801 agcctttggc ttctgcaaac gtctggctca caattccgta tcccggtgcg tccccgtgct
     1861 gtgcccgatg tgcatcggtg cttctcggtc cacccgcggc agacggcatg aaccatatgc
     1921 tgccgtcggt cagcacgccg tcaacgtcaa agagaatgag ttttatcctg cgcgctcggt
     1981 tttcagaatc ggctatcaaa ctattctgtc ccctcgaagg ttggcacttt ggaattggcc
     2041 tttcgccaag gccgctgtca tccgcgagac aaagccaaag gccaagtgcc aacggccaag
     2101 taccgggttt acaccatctc tgttccccac aaatcatgca gatggataat cccttgcacc
     2161 cggttctcgc cgtctgtcac taccagtgac gtgatcttct tctgctccat catgttcagc
     2221 gccgtcatgg cgaactcttc ggggcggatt gttttcggat tcgcggtcag gcaatcgcct
     2281 gcagtcagg
//
LOCUS       DASQYP010000017         4761 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_609, whole genome shotgun sequence.
ACCESSION   DASQYP010000017 DASQYP010000000
VERSION     DASQYP010000017.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 4761)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4761)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4761
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_609"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..626
                     /locus_tag="VE783_00540"
     CDS             <1..626
                     /locus_tag="VE783_00540"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX51909.1"
                     /translation="LLRWYLRLFIWFRFLWQVSRIELHLVPTHPDRCAGLAFLGKSSY
                     AFGPVLFAQGAMLAGLVATRVLCHGENLLSFKLIIIGFITFFVVVLLAPLLMFTPAMA
                     RGRRKGLADYGLLAQNYVDGFEKKWVFRDSARSAGAAEEFLGAADIQSLADLGNSYAL
                     VRDMRPIPFALDDIVRLAAASAAPLAPLLLTVFSLEELVMRILKVLV"
     gene            complement(771..1589)
                     /locus_tag="VE783_00545"
     CDS             complement(771..1589)
                     /locus_tag="VE783_00545"
                     /inference="COORDINATES: protein motif:HMM:NF021505.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2231 domain-containing protein"
                     /protein_id="HYX51910.1"
                     /translation="MRSKAAISSHPIHPMLVSFPIGLWVTGFIFELIGVSSTSAMLRG
                     AGFYCLIAGCVGALLAALPGALDWWTVVPPESSAKRRGLLHGSLNVVALIIFIIAAYR
                     QGSPAAEPDKVALVLMAIGVIGIGISGWLGGTLVYRNQIGVDHRYAGAGKLKERVLSG
                     WDKPVCNQSELADGQMLLSRVGEQRVVIGKCSEGLFAFSDACTHRGGPLSDGALVDCT
                     VQCPWHGSQFDIKTGRVVAGPAENKIETHPVEVRNGEVYVKLAPKVVEKPKKAA"
     gene            2071..2868
                     /locus_tag="VE783_00550"
     CDS             2071..2868
                     /locus_tag="VE783_00550"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX51911.1"
                     /translation="MPTLFRFTYLTDFYDEALLSDTAGFLFAMAQLPAREQQGVADGL
                     AGGPQFGLRNSDRFKALRKLLSSYPADSAIKPTAKLALKSLETYNAWRFVAYFPPRAF
                     DSRTAGFQLAWYSSAMYYMGERPLWPPADCDEKIYRFTHLGAFSGPKAITLKVLPDGT
                     GQVNIVEGQNALRGAPQERTAFATSESVSLFMRALEQAHFWQLPTHSDRRGEDGAEWI
                     FEGVQHNNYQVVVRWCPGTYEHAPEDAAFADAARVLFQIAGGKLGTC"
     gene            3092..4033
                     /locus_tag="VE783_00555"
     CDS             3092..4033
                     /locus_tag="VE783_00555"
                     /inference="COORDINATES: protein motif:HMM:TIGR03718.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TerC family protein"
                     /protein_id="HYX51912.1"
                     /translation="MNIGFWIAFNAAILVLLFLDLAVWSRGGRTLSFKQALLSSAFWI
                     ALAMGFAIFIHQWLGAGKSLEFVTGYLVEEALSVDNLFVFILLFNYFKVPPEQERTVL
                     FWGIIGALVMRGTFIIAGVALVHRFHWIIYLFGAFLIYTGFKLFGDEDEQVDPSRNIV
                     LRWSRKLIPVTDHYEGNRFFIQRAGRLMATPLLVVLLVVESTDVLFATDSIPAILAIS
                     RDSFIVYTSNVFAVLGLRSLFFALSGLMKLFHYLNYGLAVVLMFIGAKMLASYKYQLP
                     TWIALLVIAAILAISVLSSVLFPKPEEKTAEADPQKP"
     gene            4235..>4761
                     /locus_tag="VE783_00560"
     CDS             4235..>4761
                     /locus_tag="VE783_00560"
                     /inference="COORDINATES: protein motif:HMM:NF024273.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DinB family protein"
                     /protein_id="HYX51913.1"
                     /translation="MKIFRTLCLLAVLSFAAAAFAQGGAKSAPSPAPQAQATPAPATT
                     LSAVVDRQVSQYEKNVIDVAEAMPEDKYNFSPASLNIPGAAYKDVRTFAQLVKHTATA
                     NYNFWTKLTGEKMPENIKGPNGPDQLKTKAEIIQFLKDSFAVGHRAARTLTAENATEQ
                     LPFYRATQPRLNIASG"
BASE COUNT          924 a         1509 c         1259 g         1069 t
ORIGIN      
        1 tcctgctgcg ctggtatttg cggctgttta tctggtttcg ctttctctgg caggtctcca
       61 ggatcgaact tcatctggtc cccactcatc ctgatcgctg tgccggcctc gcattcctgg
      121 gcaagagctc ttacgctttc ggcccggtgc tctttgcgca aggcgccatg ctggccggtc
      181 tggtggccac ccgcgtgctt tgtcatggcg agaatctgct gtcgttcaag ctcatcatca
      241 tcggctttat caccttcttt gttgtggtcc ttctcgctcc tctgctcatg ttcactccag
      301 ccatggctcg cggaagaaga aaaggactgg ccgattacgg attgctggcg caaaactacg
      361 tggatggctt tgagaagaag tgggtctttc gcgattccgc ccgttccgcc ggcgctgccg
      421 aagagtttct tggcgctgct gatatccagt cgcttgccga cctgggcaac agctatgctc
      481 tggtgcgcga catgcgcccc attccgtttg cgctcgacga cattgtacgg ctggctgccg
      541 ccagcgcagc tccactggcg ccgctgttgc tgactgtttt ttctctggaa gaactcgtga
      601 tgcgtatcct caaagtcctg gtgtaagcgt tcatcagcgg taaggttttc cgattccgtg
      661 cgattccggt gattacgcgc ggttacggcg ctcttttgat tcgcgttcct ccgcaaaatc
      721 cgcggtactc tttcgctgtt ccgatcaccc gatcaccggg tgaccctatg ctaggcggcc
      781 ttcttcggct tctccaccac cttcggcgcg agcttcacat acacttcgcc gttgcgcacc
      841 tccaccggat gcgtctcaat cttgttctcc gctgggccgg ccactacgcg tccagtcttg
      901 atatcgaact gcgagccgtg ccacgggcac tgcaccgtgc aatccaccag cgcgccgtcg
      961 gaaagcggcc cgccgcgatg ggtgcacgca tcgctgaagg caaacagccc ttctgagcac
     1021 ttgccgatca caacgcgctg ctcgcccacg cgcgagagca gcatctggcc gtccgcgagt
     1081 tcgctctggt tgcacaccgg cttgtcccag ccggagagca cccgctcctt cagcttgcct
     1141 gcgccagcat accgatggtc caccccaatc tggttgcgat aaaccagcgt gcctcccagc
     1201 cagccggaaa tgccgatccc aataacgcca atcgccatca gcaccagcgc cactttgtcc
     1261 ggctctgccg caggtgatcc ctgccggtaa gcggcaatga taaagatgat cagggccacc
     1321 acgttgaggc tgccatgcag cagcccgcgc ctcttggcgc tcgactctgg tggcaccacc
     1381 gtccaccagt ccagcgcgcc tggcagtgcg gccagcaacg ctcccacgca gccggcgatc
     1441 aggcaataaa atcccgcgcc ccgcaacatg gcactcgtgc tgctcacgcc aatcagctcg
     1501 aaaatgaatc cagtcaccca cagcccgatc gggaatgaca ccagcatcgg gtgaatcgga
     1561 tgcgatgaaa tagcagcttt ggaacgcata acccctcccc aacctacttg atgggattga
     1621 gatgcagcga tggaaggatg cctctactca ggccatcggc gagcgtcttc tctatgcacg
     1681 gctcgcctgc gcgatcccgc ccgattcgca aacatggcgg ctagccacaa tgatggcgta
     1741 gagacgcgac atgtcgcgtc tcgctctccc gcgcagacac gagacctgca ccgctaggat
     1801 tatgccgcgg taggtactcg ttccgggccc cagacgagca tacaatcaat gcgaactact
     1861 atgcgcgcaa cgttcgccct catcattctc actctcgcag ctttagtgtc gacggctgcc
     1921 gagacgactc gaactcccca acgagagaag gcactccaca gaatcgagtc ctgcctgcgg
     1981 cttaacgatg tctctgggcg tcgatgcaag cacctgaaac aagatgtcca gggccttgtg
     2041 gatctctata gagcagggga caagtctgta ttgccgaccc ttttccgctt tacctatctc
     2101 accgattttt atgatgaggc actcctctcc gatacggctg gctttctttt cgccatggcc
     2161 caactgcccg caagggagca gcagggtgtt gccgacggcc tcgccggagg acctcaattt
     2221 ggactgcgca attctgaccg gttcaaggca ctccgcaagc tgctgtccag ttatccggcg
     2281 gactcggcaa taaagccgac cgccaagtta gcgctgaaat cgctcgagac ttacaacgcg
     2341 tggcgcttcg tggcgtattt cccgcctcgt gcattcgata gccgtaccgc agggttccag
     2401 ctggcttggt attccagtgc catgtattac atgggagaaa ggccgctctg gccgcctgct
     2461 gactgcgacg agaaaatcta tcggtttacc catttgggtg ctttctccgg cccgaaggcc
     2521 ataaccctga aagtgctgcc cgacggaaca ggccaggtca atattgtgga aggacagaat
     2581 gcgctacgcg gcgctccgca agagcgcaca gcctttgcca ctagtgagag cgtctcgctc
     2641 ttcatgcgcg cgcttgaaca ggctcacttt tggcaactgc ccacccactc tgaccggcgc
     2701 ggtgaagatg gcgcggaatg gatatttgaa ggcgttcagc acaataacta tcaggtggtt
     2761 gtgcgctggt gccctggcac gtatgagcat gcgccagaag acgccgcttt cgccgatgcg
     2821 gcgcgagtgc tattccagat tgctgggggt aaactcggaa cctgctgaac ttcttggtga
     2881 tggtggaaca ggatgcccgt tgccgcccga cacgcttctg gtcgatccca ctcctccact
     2941 cgtctttctt cagaagttta gtcggcgcac tgccgacttt ctcttttgtc gtatttcgtt
     3001 tctaatcgca gcatgcgttc acagacctcg ggtgttccgg acagcaggga aatgcgggag
     3061 gccggaatga tttctcccct gtagattccc catgaatatt ggtttctgga tcgccttcaa
     3121 cgccgccatt ctggtcctgc tgttccttga tctcgccgtc tggagccgcg gcggacgcac
     3181 tctctccttc aaacaggcgc tcctgagcag tgccttctgg atcgccctgg ccatgggctt
     3241 cgccattttc attcatcagt ggctcggcgc cgggaaaagc cttgaattcg tcaccggcta
     3301 cctcgttgaa gaagcgttga gcgtcgacaa tctttttgtc ttcatcctgt tgttcaacta
     3361 tttcaaggtt ccgccggagc aggaacgcac agtgcttttc tggggcatca tcggcgcgct
     3421 ggtgatgcgc gggactttca tcattgccgg tgtggccctg gtgcatcgct ttcactggat
     3481 catctatctg ttcggcgcgt tcctcattta caccggcttc aaactgttcg gcgacgaaga
     3541 cgagcaggtg gacccctcgc gcaacatcgt cctgcgctgg agccgcaagc tcatcccggt
     3601 gactgaccat tacgaaggca accgcttctt catccagcgc gccggacgcc tcatggccac
     3661 gcccctgctg gttgttttgt tggtggtgga aagcactgac gttctgttcg cgaccgattc
     3721 catacccgcc atcctggcca tcagccgcga ttccttcatc gtttacacat ccaacgtttt
     3781 tgccgtgctc ggcctgcgct cgctcttctt cgcgctctcc ggcctgatga agctgttcca
     3841 ctatttgaat tacggcctcg ccgtggtgct gatgttcatc ggcgccaaga tgctcgcgtc
     3901 gtacaagtac cagcttccca cctggatcgc gctgctggtg atcgccgcca tcctcgccat
     3961 ctcggtcctc tcttccgtcc tctttcccaa accagaagag aagaccgccg aagctgatcc
     4021 ccaaaagcca taacaaaata caggtgtaaa cctgaagcca ccatggcgga aatcattgca
     4081 acggcagccc gaagggcgga atagtgcaag cccggggcgg gacgccctgg ggagtctggt
     4141 atttacatga tggcccgcaa gggcggcgca agatcttaaa aggccgtccg ccgtgttatc
     4201 ttttctccgc cattccaacc ggaggagaaa ccccttgaag attttcagaa cgttatgcct
     4261 gctagctgtc ctgagcttcg ccgcagccgc cttcgcccag ggcggagcaa aatcagcgcc
     4321 atccccggct ccacaagctc aagccacccc cgcaccggcg accacgcttt cagcagttgt
     4381 tgatcgccag gtgagccagt atgaaaaaaa cgtgattgac gtagccgagg ccatgccgga
     4441 ggacaaatac aacttctctc cagccagcct gaacattcct ggcgctgcct ataaagacgt
     4501 gcgcaccttt gcccagttgg taaaacatac ggccaccgcc aactataatt tctggaccaa
     4561 attgacgggc gagaagatgc cggagaacat caaagggccc aacggtcccg accaactgaa
     4621 aaccaaggcg gagatcatcc agttcctgaa agactcattt gccgtcggcc atcgcgccgc
     4681 caggaccctg actgctgaaa acgcgaccga acagcttccc ttttaccggg cgacgcagcc
     4741 acggttaaac atagcgtccg g
//
LOCUS       DASQYP010000018         2403 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_233680, whole genome shotgun sequence.
ACCESSION   DASQYP010000018 DASQYP010000000
VERSION     DASQYP010000018.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 2403)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2403)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2403
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_233680"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..221)
                     /locus_tag="VE783_00565"
     CDS             complement(<1..221)
                     /locus_tag="VE783_00565"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX51914.1"
                     /translation="MNRIPSASLKHLAFATVCISALVLLPAFAAAQSAGYDLLQTGSG
                     ASVDLSSIGLGKVPLQGVPIQTSTGSTDT"
     gene            complement(373..2031)
                     /locus_tag="VE783_00570"
     CDS             complement(373..2031)
                     /locus_tag="VE783_00570"
                     /inference="COORDINATES: protein motif:HMM:NF025006.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxypeptidase-like regulatory
                     domain-containing protein"
                     /protein_id="HYX51915.1"
                     /translation="MRVFSRVSLIAASIAIFLQVGFASEPGALIEGTVLNKLSGAPVK
                     GAHVIYTRLAGGSEAPLPIAKDTDPQGHFRLELEPGAYRVWVERSGFARQNYGSSDPL
                     GEGSALKVAAGQEVRDVSFRITPLGAIFGRVFDEDGDPVPGVGIQVLRVSYNTGRRQL
                     IPVAGASSNDRGEYRCYDLPAGRYFIMASPRSSPLSHPLEQGALVPEVQDAFVPVYYP
                     GVVNPEAASAVALPDGGEVGDVNVALQKMHAATLRGRLLGPVKSNQGQLEVFLAHNEH
                     GFASFIDRASGVVDPASGRFEFRGVAPGGYLLIGLQNVGRQVFASRLPVEIAAETAPQ
                     DINLSLVPGNEVQGSIRMEDGSAPPAKTVVRLVSKEGLLPIPPSAGTVSPDGSFRLQG
                     ILPGEWELALDSLPEGVWVKSVSFADSRVAGEEINIPPGGRGPLQIVMGAGGAQLSGS
                     VTKDGQPQRASVVLVPAEPELQRFAQAYRTMFTNENGIYVIKNVPPGQYRLFAFESIE
                     PFAWMDPAVMSSADSVAQSITVGAGDRVSRDLTAVSYEATVPSR"
     gene            2130..>2403
                     /locus_tag="VE783_00575"
     CDS             2130..>2403
                     /locus_tag="VE783_00575"
                     /inference="COORDINATES: protein motif:HMM:NF012488.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class V-fold PLP-dependent
                     enzyme"
                     /protein_id="HYX51916.1"
                     /translation="MSSFPIDQVRAEFPALEENFIFFDNAAGAQSPRGVLNAVADHLL
                     HRNVQRGGRYRHSQEVDATIARARESVALLVNARHPEEISFGMNATS"
BASE COUNT          545 a          731 c          664 g          463 t
ORIGIN      
        1 atcgtgtcag tgcttccggt agaggtttgg attggcacac cctgcagcgg aacttttcca
       61 aggccgatgg agctcagatc aacagaggct ccggagccgg tctggagcag gtcatacccg
      121 gcgctctgtg ctgcggcaaa agcgggaagc aggacaagcg ccgaaatgca gacggttgcg
      181 aaggcaaggt gtttcaaact ggcggacgga atccggttca tggataggtc tcctcactga
      241 ttttcgtcgc caattaaata gcctgaggcc agctcaaatc ttctcctgga ttgcgaaaat
      301 ggaataaaga taggctgccg ccctgaggga aaagaccatc cggaaccggg agccgctcta
      361 gcatttagac cgtcagcgcg aaggtaccgt ggcttcataa gacacggcag tcaggtcgcg
      421 gctgacccgg tcaccggcgc cgacggtaat cgattgagcc acgctgtctg cggaactcat
      481 gactgccgga tccatccaag cgaacggttc aatgctctcg aaggcaaaca agcggtactg
      541 gccgggcggc acattcttga tcacatagat gccattttcg tttgtgaaca tcgtgcgata
      601 ggcctgtgcg aatcgctgaa gctccggttc ggccgggaca agcaccacgc tggcccgctg
      661 cggctggcca tctttggtga ccgagccaga tagctgcgct cctcccgctc ccataacgat
      721 ttgaagtgga ccgcgccccc ccggcggaat gttgatctcc tcgcctgcca cgcgcgagtc
      781 cgcgaagctg acactcttca cccacactcc ctccggcagc gaatccagcg cgagttccca
      841 ttcgccgggc aaaatacctt gcagccggaa gctcccgtct ggcgatacgg ttcccgcaga
      901 cggcggaatg ggaagaagcc cttctttgct caccagtcgc accacggttt tggccggcgg
      961 cgccgaaccg tcttccatcc tgatgctgcc ctgaacttca ttgccgggaa ctaatgagag
     1021 attgatgtct tgcggagcag tctccgccgc tatctcaacc ggtaacctgc tggcgaaaac
     1081 ctgcctgcct acgttctgca gaccgatgag caggtagccg ccgggcgcga cgcccctgaa
     1141 ttcgaagcgt ccactcgcgg gatcaacaac tccggatgca cgatcaataa acgaggcgaa
     1201 accgtgttca ttgtgggcca ggaaaacctc cagctgtccc tgattgctct ttaccggccc
     1261 aagcagacga cctcgcaacg ttgcggcatg cattttctgc aaggccacgt tgacatcgcc
     1321 cacttcaccg ccatctggca gagcaacggc tgaagcagct tcaggattca ccaccccggg
     1381 atagtaaaca ggcacaaacg cgtcctgcac ttcaggaaca agcgcgccct gttcaagcgg
     1441 atgagagagc ggagaagatc tgggcgacgc cataatgaaa tagcggccag ccggcaggtc
     1501 atagcagcga tactccccgc gatcattcga acttgcgccg gctactggaa tgagttgccg
     1561 ccgcccggtg ttgtagctca cgcgcagaac ctgaatgccc actccgggca caggatcgcc
     1621 gtcttcatca aacacacgcc caaagatggc cccaagcggc gtgatgcgga atgaaacgtc
     1681 ccgcacctcc tgcccggcag ccactttcag cgcgctgcct tctcccagag gatcgctgga
     1741 tccgtagttc tggcgcgcaa acccggagcg ctctacccac acgcgatacg caccgggctc
     1801 aagttccagc cggaaatgcc cttgaggatc agtatctttg gcgataggaa gaggcgcctc
     1861 acttccaccc gccagcctgg tatagatcac atgcgcgccc tttacgggag cgcctgagag
     1921 cttgttcagc acagttcctt caatcaatgc gccaggctcg gaggcgaaac ctacctgaag
     1981 aaaaatggcg atagatgcag cgatgagtga gacacgagaa aacacacgca taaggcacgt
     2041 ccgggcgcat tataacccgt aagcatttct ttcaaaccgc aagtgaacgc gtaacacgca
     2101 agacgtaact ctcttatatg attggccgca tgtcttcttt ccctattgac caggtccgcg
     2161 cggaattccc ggcgctggag gaaaatttta ttttcttcga taatgccgcc ggtgcgcagt
     2221 cgcccagagg ggtattgaac gctgtggctg atcatcttct gcatcgcaat gtgcaacgcg
     2281 gtggcaggta caggcactcg caggaggtgg acgcaaccat cgcgcgcgcc agagagagtg
     2341 tggccctgct ggtcaatgcc cgccatcctg aagaaatatc cttcggcatg aacgcaacct
     2401 cat
//
LOCUS       DASQYP010000019         3479 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_128093, whole genome shotgun sequence.
ACCESSION   DASQYP010000019 DASQYP010000000
VERSION     DASQYP010000019.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 3479)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3479)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3479
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_128093"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(356..1099)
                     /locus_tag="VE783_00580"
     CDS             complement(356..1099)
                     /locus_tag="VE783_00580"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX51917.1"
                     /translation="MKKDVAKILVTGFAGLGAVAAYELWLKPKMFFWGATPEEHSRAY
                     PGDELTPDTLGICTRAITIIAPPERVWPWIMQVGQDRAGFYSYSWLENLFGAEMRNTY
                     RLVPEWQHREVGDDLWLAAPTHYGGQARLTIARLEPCRAMVLVPHTDGELAIDQEYAP
                     HGSWNFILEPAPNADPTKPAAATRLIMRSIMPEHVTGPERLSRIFFDPAHFVMERRMM
                     LTIKRLAEAEELRWPEMEEIELPLPETVV"
     gene            1235..2062
                     /locus_tag="VE783_00585"
     CDS             1235..2062
                     /locus_tag="VE783_00585"
                     /inference="COORDINATES: protein motif:HMM:NF020498.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase domain-containing protein"
                     /protein_id="HYX51918.1"
                     /translation="MKLCVVLVMVLVSASSGAQPNPAKSSGKKPAASYVGFDKNDYPG
                     DSVLDELRKTFSFTGYWLNTPPGAKTSAWLGKRALLRSKGFGFVVLFNGKTYAQLKAG
                     DAAAVGASDGTEATRLAGSEGFPARTIIFLDHEEGGRLLPEQRAYLHAWVDAVVKDRF
                     RAGVYCSGIAAREGGGATVVTAQDIRENAGGRQIAFFVANDQCPPSPGCSVSAGVAPA
                     QGGIEFADVWQYAQSPRRKQYTRSCAKTYAADGNCYAAGKNFVDLNVGASADPSHGR"
     gene            complement(2087..2629)
                     /locus_tag="VE783_00590"
     CDS             complement(2087..2629)
                     /locus_tag="VE783_00590"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX51919.1"
                     /translation="MTHAQLVRMAEHWLRSRYRCGIVLSEQSCASGETPDVIAWKGKC
                     RSVLVECKISRADFLADREKSFRKDPAQGMGCERLYCVPRGLLAPAELPKGWGLLEAK
                     GRELSLTVKPCRASQRSESGLMLEMNLLLASLRRVEVRIEPQTITDFLKWKNRLLEYN
                     GGTLPEGVVAPEAEPNVHLA"
     gene            2757..3140
                     /locus_tag="VE783_00595"
     CDS             2757..3140
                     /locus_tag="VE783_00595"
                     /inference="COORDINATES: protein motif:HMM:NF025903.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tautomerase family protein"
                     /protein_id="HYX51920.1"
                     /translation="MPLVRIALIEGKSEDYKKKVSNAVHQAMVETMNVPPLDRFQIIT
                     SVPRADFVYDPKYLDIARTDDLVMIQITLNTGRTLELKKAFYKRVVELLAQEVKLRPE
                     DVLINLVEVMKENWSFGNGIAQYAP"
     gene            complement(3164..>3479)
                     /locus_tag="VE783_00600"
     CDS             complement(3164..>3479)
                     /locus_tag="VE783_00600"
                     /inference="COORDINATES: protein motif:HMM:NF025932.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="enhanced serine sensitivity protein SseB
                     C-terminal domain-containing protein"
                     /protein_id="HYX51921.1"
                     /translation="NVYVMAPENAPADHVLQSAADAAREISELRQLYLFQMTVPGGEA
                     HNVLGIELLGEPRPPRVEEIMRIIAQSVNTLLEKNEYLDLLVLTGPLVIAVQERGRPL
                     LD"
BASE COUNT          684 a          964 c         1128 g          703 t
ORIGIN      
        1 acattttggc gcgatggaag tggtggcaat cgccgtaatc cacccagaaa accaacagcg
       61 ggttttccgg gggccccggt aatcgccgtg atcgccgaca tcgtgcgtga tcggaataga
      121 aacaccaact gctctcaccg gggatgatcg tgttaagtcc tttgaaatcc tagttgacgg
      181 tggggggtta ccccggcgta atcgccggta atcgccggtt cgcgtttgat cggaaaacaa
      241 cggcaacagc gtttcaccgc ggagtgtgca gaggttgcgg aggagttccg gctatcgagg
      301 acacatggca aacgcgagtt gtaagccccg ttgggaccag agcgggttcg gtccctcaca
      361 ccaccgtttc cggcagtggc agttcgatct cttccatctc tggccaccgc agctcttcgg
      421 cttccgccag ccgcttgatg gtcagcatca tgcgccgctc catgacgaaa tgggcaggat
      481 cgaaaaagat cctgctcaag cgctcgggtc cggtgacgtg ctcaggcatg atgctgcgca
      541 tgatcaaccg agtggcggca gccggttttg tgggatcggc gttcggcgcc ggctcaagga
      601 tgaagttcca gcttccgtgc ggagcgtatt cctggtcgat ggccagttcg ccgtcagtat
      661 gcggcacgag caccatggcg cggcagggct cgaggcgggc gatggtaagc cgcgcctggc
      721 cgccgtagtg ggtgggcgct gccagccaga gatcgtcgcc cacctcgcgg tgctgccact
      781 cagggaccag gcggtaggtg ttgcgcatct ccgcgccgaa cagattctcc agccatgaat
      841 agctgtaaaa tcccgcgcgg tcctggccca cctgcatgat ccacggccac acccgttccg
      901 gcggagcaat gatggtgatg gcgcgggtgc agatgccgag cgtatccggg gtgagttcgt
      961 cgcccgggta ggcgcgcgag tgctcttccg gagtggcgcc ccagaagaac atctttggct
     1021 tgagccagag ctcgtaagca gccacggccc cgagtccggc aaagcctgta accaggattt
     1081 ttgcaacgtc cttcttcatg ggagactcct tgccgggaaa atgctggcgc acaccggcct
     1141 tgttttacta tttcactttg ccgccgacgg tgggggtgat gcgaatcacc gcgccgtgtg
     1201 attgtgcgcg gcggtaaagc aggaaggagg gactttgaag ctctgcgtgg tgctggtgat
     1261 ggttttggtg tcggcgagtt ctggagcgca gccgaaccct gcgaagtcgt ccggtaagaa
     1321 gcctgcggcc agctacgtgg gttttgacaa gaacgactac ccgggcgact ccgtgctgga
     1381 cgaactgcgg aaaacgtttt cctttaccgg atactggctg aatactcctc cgggcgcaaa
     1441 aacttcggct tggctcggca agcgcgcgct gctgcggagc aaaggctttg gatttgtggt
     1501 gctgttcaat ggcaagactt atgcccagct caaggcgggc gatgctgcgg cagtgggagc
     1561 aagtgatgga actgaagcga cgaggctggc tgggagcgaa ggcttcccgg cacgaaccat
     1621 tatcttcctg gaccatgaag aaggaggacg gcttctcccc gagcagcgcg cctatctgca
     1681 cgcgtgggtg gatgccgtgg tgaaagaccg tttccgcgcc ggggtttatt gttcggggat
     1741 cgccgcgcgg gaaggcgggg gagctacggt ggtaacggcg caggacatcc gcgagaatgc
     1801 cggcggtcgg cagattgcct tcttcgtcgc caacgatcag tgcccgccgt cgccgggctg
     1861 cagcgtgagc gcaggagtcg cgcccgcgca gggcggcatt gagttcgcag acgtctggca
     1921 gtatgcgcaa tcaccgcgcc ggaagcagta cacccggagc tgcgcgaaaa cgtacgctgc
     1981 ggatggaaac tgctatgccg caggaaaaaa ttttgttgat ctgaacgttg gtgcttcagc
     2041 cgatccttcg cacggacggt aaggcgagag cgagacagga ggtttttcag gcgagatgca
     2101 cgttgggttc ggcttccggc gccaccacgc cttccggcaa cgtgccgccg ttgtattcga
     2161 gcaggcggtt cttccacttg aggaagtcag tgatggtctg cggctcaatg cggacttcca
     2221 cgcggcgcag gctggcgaga agcaggttca tctccagcat aaggccggac tcgctgcgtt
     2281 ggctggcgcg gcaaggtttg acggtgaggg aaagctcgcg gcctttggcc tccagcagtc
     2341 cccagccttt gggaagttca gcgggtgcaa gcaggccgcg cggcacgcaa tacagccgct
     2401 cacagcccat gccctgcgcc gggtctttgc gaaatgattt ctcgcggtcg gcaagaaaat
     2461 ctgcgcgcga gattttgcac tcgaccagaa cggaccggca cttccctttc caggcaatca
     2521 cgtccggcgt ttctccgctg gcgcaggatt gttctgagag cacaatgccg caacggtagc
     2581 ggctgcggag ccagtgttca gccatgcgga cgagctgggc gtgagtcatg agagttgttg
     2641 taccgcatgt ggaggcaggt ggctagtatc agtttcggtt tcttgcagcg attttttcgc
     2701 ggcaactctg aatcctgcgc ctcgcctgta caatccaaag ctctggaggt gagccgatgc
     2761 cactggtgcg gatcgctctc attgagggaa aaagcgagga ctacaagaag aaggtttcca
     2821 acgctgtcca ccaggcaatg gtggagacca tgaacgtccc gccgcttgat cgcttccaga
     2881 tcatcaccag cgtgcccagg gccgattttg tttacgatcc gaaatatctg gatatcgcgc
     2941 gcacggacga tctggtgatg atccagatca cgctgaatac cggccgcacg ctggagttga
     3001 agaaggcttt ttacaagaga gtggtggagt tgctggcgca ggaggtgaag ctccgccctg
     3061 aagacgtgtt gatcaatctg gtggaagtaa tgaaggaaaa ctggtccttc ggaaacggaa
     3121 ttgcgcagta cgcgccctag ggcccgaaca cagagagcgt cggtcagtcc agtaatggcc
     3181 gcccgcgctc ctggacagca attaccagcg ggccagtcag taccaggaga tcgaggtatt
     3241 catttttctc aagcagcgtg tttacgcttt gcgcgatgat gcgcatgatc tcttccaccc
     3301 gcgggggccg cggttctccg agcagctcaa tgccgagcac gttgtgggct tcgccgccgg
     3361 gcacggtcat ttgaaacaag taaagctggc ggagttcgct gatctcgcgc gcagcgtcag
     3421 cggctgactg cagcacatga tcggcaggag cgttctccgg ggccatgaca taaacattc
//
LOCUS       DASQYP010000020         2511 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_43001, whole genome shotgun sequence.
ACCESSION   DASQYP010000020 DASQYP010000000
VERSION     DASQYP010000020.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 2511)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2511)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2511
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_43001"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(197..272)
                     /locus_tag="VE783_00605"
     tRNA            complement(197..272)
                     /locus_tag="VE783_00605"
                     /product="tRNA-Ile"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(237..239),aa:Ile,seq:cat)
     gene            complement(414..1991)
                     /locus_tag="VE783_00610"
     CDS             complement(414..1991)
                     /locus_tag="VE783_00610"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX51922.1"
                     /translation="MNQFIEKFATHIKGVLTGFDRLVLRGHLRQIVYSQGLLAYLWDR
                     RVLLKHFGRHVEETSRQIKQASLAVAQQQQRPCLYLQSSQVSKEEIAQKIAVQDKVEQ
                     GLICALSCVEPCMSFEVIRNAQSQELELRSALRKCLHVYHYWKHPQLGFLYARLQTWF
                     PFSVQIGLNGREWLARTMDQQGMKYQKQDNCFTWIEDYAQAQKWMDEQLKADWPQLLN
                     AIAGQLNPVHQQIFSHFPLSYYWSVYQSEWAMDLGLDPEQLRRLYPKLLRLGMTCFSC
                     SDVLRFLGKKPTREGQVPAHLLAQVTTDLRRRREGVRLKHFLGANSIKLYDKAYTEGM
                     AVLRPEFTMNDPSRFLVYRAKEGGDPQDLQWRTLRRGIADMYQRAQVCQKALNRYCDA
                     LASVDDSSTLEELIHHLERRVQWQGHPVRALHPFACEDRELLQTVNRGEFTLHGFRNA
                     DLRALLYATPATSQREERKRSSAVSRKLRLLRAHGLIQKLPHTYRYQVTEKGRQIINA
                     VLAARHATVNYLLAQAA"
     gene            2329..>2511
                     /locus_tag="VE783_00615"
     CDS             2329..>2511
                     /locus_tag="VE783_00615"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX51923.1"
                     /translation="MQEQGDNFPNWVLDQLGIETELANRVAMGRGLQPPRFRWVPFDD
                     AMMFPLKNSALASETPD"
BASE COUNT          544 a          704 c          695 g          568 t
ORIGIN      
        1 aatttggtgg gcccggtagg attcgaactt gagccggtat cgcggcgtct gagccgcgag
       61 gcgaaatcct gagcgaagcc gaaggacctg ctccgcaaac tggtgggccc ggtaggattc
      121 gaacttgagc cggtatcgcg gcgtctgagc cgcgaggcga aatcctgagc gaagccgaag
      181 gacctgctcc gcaaactggt gggcccggta ggattcgaac ctacaaccaa cagattatga
      241 gtctgctgct ctaaccgttg agctacaggc ccccgcgttc aagtttcgca cacgctcgcc
      301 agccttgcca atctcgacca ggaaccaaca ttccggatac gtccgaatac ctttgtgctc
      361 cttcgtgtcc tttgtattac taaccataaa gttctttcta tgctgcgaag gatttaggcg
      421 gcttgggcca gtaagtaatt cacggtggca tggcgcgccg ccaggacagc attgatgatt
      481 tgtcttcctt tttccgtcac ttgatagcgg tacgtatgcg gcagcttttg gattaacccg
      541 tgcgccctca ggagtcgcag cttgcggctg acggcagagg agcgtttccg ttcttccctc
      601 tgggaagtgg caggggtggc ataaagcaga gcgcgcagat cggcgttgcg aaagccgtgc
      661 agagtgaact ctccacgatt gacagtttgc agcaactccc tatcttcgca ggcgaacgga
      721 tgcagggccc gcacggggtg gccttgccat tgcacccgac gttccagatg gtggatgagt
      781 tcttccagcg tcgagctgtc atccacgctg gccaaagcat cgcagtagcg gttcagggct
      841 ttctggcata cttgggcacg ctgatacata tcggcaatcc cacgccgcag ggtgcgccac
      901 tgtaaatctt gtgggtctcc gccctccttg gcacggtaca ccagaaaccg ggaaggatca
      961 ttcatggtaa attccggacg caagaccgcc atcccttcgg tgtaagcctt gtcgtagagt
     1021 ttgatggaat tagcacccag gaaatgcttg aggcgtactc cttctcggcg acggcggaga
     1081 tcggtggtca cttgggcgag taagtgggcc ggcacttggc cctcccgcgt gggtttcttt
     1141 cccagaaaac gcagcacatc gctgcaggag aagcaggtca tgcccagacg caggagtttg
     1201 ggataaaggc ggcgcagttg ttctggatcc aagcccagat ccatggccca ttcgctttga
     1261 tagaccgacc agtagtagga cagaggaaaa tgggaaaaaa tctgctggtg cacaggattg
     1321 agttgcccgg caatggcatt gagtaactgc ggccagtcgg cttttaactg ctcatccatc
     1381 cacttttgtg cctgggcata atcttcaatc caggtgaagc aattgtcctg tttctgatat
     1441 ttcatgcctt gctgatccat ggtgcgggcc agccactcac gtccattcag gccaatctgt
     1501 accgagaagg gaaaccaggt ttgcagccgg gcgtagagaa agcccagttg cgggtgcttc
     1561 cagtagtggt aaacatgcag gcatttgcgc aaagccgagc gcagttccag ttcttggctc
     1621 tgggcattgc ggattacttc aaagctcatg cacggctcca cgcaactgag cgcgcatatt
     1681 aagccctgct ctaccttgtc ctgcaccgca atcttctgcg caatctcttc tttactcact
     1741 tgactcgact gcagatacag gcaaggacgc tgctgttgct gagccactgc cagggaggct
     1801 tgtttgatct gccggctggt ttcctcgaca tgccgtccga agtgcttgag cagaactcta
     1861 cggtcccata gataagccag cagcccctgg ctgtagacaa tctgccgcag atggccgcgc
     1921 aataccaggc ggtcaaatcc agtaagaact cccttgatat gagtggcaaa tttctcgata
     1981 aactggttca tggcgttcct ttccgtgccg atgtgttttc gcgaacaaca tcatacggat
     2041 ttctggaacg cctttatttt ggttgcggct ccgccgcgct gtggttaagg gcttttccgg
     2101 tttccgatcc gcgatcattc gcacccgcca aaactggtag ccgccggcga aaaagacgac
     2161 gattttgacg ccctgccctg cgatcccctg gagccgagcg atcccaccac cgtttcgcga
     2221 ccggaaaatc cgcaatacat cgccgcctgg aaagcgcttt ataactatcc ttataatgat
     2281 cgcgcgccag aacacatcaa agagctgctg caaaccaaac agaaggtcat gcaggaacag
     2341 ggcgataatt tccccaactg ggtgcttgac cagcttggca ttgagactga attggccaac
     2401 cgcgtagcca tgggacgcgg actacagccg ccgcgcttcc gctgggtgcc gttcgatgac
     2461 gcgatgatgt tccccctgaa aaattccgcg ctcgccagtg aaacgccgga c
//
LOCUS       DASQYP010000021         2716 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_21936, whole genome shotgun sequence.
ACCESSION   DASQYP010000021 DASQYP010000000
VERSION     DASQYP010000021.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 2716)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2716)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2716
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_21936"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            32..616
                     /locus_tag="VE783_00620"
     CDS             32..616
                     /locus_tag="VE783_00620"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX51924.1"
                     /translation="MKHARAMLVATALMTGGAALASAQVVAVVPVQWGYRDNDDRQAF
                     REGVQQGRWDAQHGRRANADSNNRWREGDDRRAYRDGYMRGFNEAAGSGYNGGYRDRD
                     RDGDWDRGRGGWNNGFGMNRARDFGYQDGFRDGQNDRATGHSYRPTHDNNFKHGDRGY
                     ESNMGNRDYYKNAYRQAYQDGYQRGYNNGPIYRR"
     gene            complement(717..947)
                     /locus_tag="VE783_00625"
     CDS             complement(717..947)
                     /locus_tag="VE783_00625"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: protein motif:HMM:NF013590.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M13-type metalloendopeptidase"
                     /protein_id="HYX51925.1"
                     /translation="MDGFTPEQQFFIAWGQFRGDEIRPETQRMMMQGDPHPVAKYRVI
                     GPLSNMPEFAKTFSCKPDAPMVRPAADRCEVW"
     gene            complement(889..1788)
                     /locus_tag="VE783_00630"
     CDS             complement(889..1788)
                     /locus_tag="VE783_00630"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: protein motif:HMM:NF013590.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008237 - metallopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M13 family metallopeptidase"
                     /protein_id="HYX51926.1"
                     /translation="MPFVNENFAFYGQYLGGAKELKPRWKRCAESTDQLLGEALGKKY
                     VEKYFPPEAKARAQEMVQNILAAMHDTIEGLDWMGPETKKKALEKLSTFNPKIGYPDR
                     WKDYAGLKISRASFWNNEIAASGWNVNDDRAHIGKPTDKKLWGMTPPTSDAYYNALLN
                     EIAFPAGILQPPAFSVNNVDAVNYGAIGVVIGHEISHGFDDEGAQFDAQGRLNNWWTP
                     DDQKRFQERTACVVRQFDGYFIEPGIHHNGKLVLGESIGDLAGAKIAFLAFKKAEQKN
                     PAANHRRLHTGTAVLYRLGTVPR"
     gene            complement(1908..2645)
                     /locus_tag="VE783_00635"
                     /pseudo
     CDS             complement(1908..2645)
                     /locus_tag="VE783_00635"
                     /inference="COORDINATES: protein motif:HMM:NF017464.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="M13 family metallopeptidase N-terminal
                     domain-containing protein"
BASE COUNT          570 a          743 c          795 g          608 t
ORIGIN      
        1 ggactagcag acgggcaaca ctggaggaca catgaaacac gcgcgagcaa tgctggtggc
       61 aacggcgtta atgaccggag gcgccgcgtt ggcgtcagcc caggtggtag ctgttgtgcc
      121 ggtgcaatgg gggtatcgcg ataacgacga ccggcaggcg tttcgtgaag gtgtgcagca
      181 gggccgttgg gatgctcaac atggccgccg tgcaaacgcc gacagtaaca accgctggcg
      241 agaaggcgac gaccggcgcg cgtatcgtga cggctacatg cgcggattta acgaagccgc
      301 aggcagtgga tataacggcg ggtaccgcga ccgggaccgt gatggcgact gggatcgtgg
      361 acgcggcggc tggaacaacg gctttggaat gaatcgtgct cgcgactttg gataccagga
      421 cggtttccgc gatggccaga atgatcgcgc cactgggcac agctaccgtc cgacgcacga
      481 caacaacttc aagcatggtg accgtggcta cgagtcgaat atgggaaaca gagactatta
      541 caagaatgcc tatcgccagg cctatcagga tggttaccag cgcggctaca acaacgggcc
      601 gatctaccgc cggtaacaca aagttcggga tgtaaggccg aacatttccg acacacaaaa
      661 gagacgcagc cctcaaagct gcgtctctct gttttgttgc taaacttcgc tcagtgctac
      721 cagacttcac aacggtcagc cgcaggcctc accatcggcg catccggctt gcaggagaaa
      781 gtctttgcga attccggcat gttcgagagt ggcccaatga cgcgatactt ggccacaggg
      841 tgcggatccc cttgcatcat catgcgctgc gtctccgggc gaatctcgtc acctcggaac
      901 tgtccccagg cgataaagaa ctgctgttcc ggtgtgaagc cgtcgatggt tggctgcggg
      961 gtttttctgt tcggcttttt tgaaggcgag gaatgcgatc ttggcgccgg ccagatcgcc
     1021 gatgctttcg cccagcacca gcttcccgtt gtgatggatg cccggctcga taaaatatcc
     1081 gtcgaactgg cggaccacgc aggcagtgcg ttcctggaaa cgcttctggt catcgggagt
     1141 ccaccagttg ttcaggcggc cttgcgcgtc aaactgcgcg ccttcatcgt caaacccgtg
     1201 gctgatctcg tgtccgatca ccaccccgat ggctccataa ttcacggcat caacattgtt
     1261 tacgctgaac gccggcggct gaagaattcc ggcagggaag gcaatttcat ttaacaacgc
     1321 gttatagtac gcgtccgaag tgggcggagt catgccccag agcttcttgt ccgtgggctt
     1381 gccgatgtga gcccgatcgt cgttcacgtt ccacccggaa gcagcaattt cgttgttcca
     1441 gaaagatgca cgactgatct tgagtccagc gtagtccttc catctatcgg gatagccaat
     1501 cttggggttg aacgtagaaa gcttttccag cgctttcttc tttgtttccg gacccatcca
     1561 gtccagccct tcaatggtgt catgcatggc ggcaaggatg ttttgcacca tctcctgcgc
     1621 acgcgctttc gcttctggcg gaaagtactt ttctacgtat ttcttgccca gagcttcgcc
     1681 cagcagttgg tcagtggatt cggcgcagcg tttccagcgg ggcttgagtt ctttggctcc
     1741 gccaagatac tgaccgtaaa acgcaaagtt ctcgttgacg aagggcattg agagcgcagt
     1801 tgccgccgaa tgcaagaact gccatttaag gtaggtcttc caactgcaag cgaggactcg
     1861 tgaagctgtt tctccacttg ctccaggaat ttcggctcag ctacgttcag gtcggctctt
     1921 gagatatgcg cgtcagaaaa gaatgttggc cagtcgagga ttggggacag cttgtccaac
     1981 tgcgcgaagg tcatcttgtg atcggtcgct gacggatcgc gaagagccac attatccagc
     2041 gaagcgcccg ccagtttttc ctcgaagtca aaaaccgtcg cggcagcagc ctttgctgct
     2101 gcatcgttgt aaccagccag tttgaatata ttggccacat ggacgaggta tttcgcacga
     2161 gcgtccgcga agcgctgttc ggttttgaag tagtagtcgc gatcgggcag gccaagtccg
     2221 ccggcgccga tgaaagcgat agtctcagat ggattgtgat tgtccggact ggagccaaag
     2281 ctgaaaggaa ccgccaaccc catgtgctgg agcttgcgga caatcacggg tatatcggct
     2341 ggctttttca gcgagtcaat ttcggcgagg aggggcttgg caggtgcgac gccgagctta
     2401 tcgatctttg tctcgtccat gcaggagccg tagtaatcgc cgatcaactg ttcggtgctg
     2461 ccctgaggcc agttggtctt ctgcgacaca acgtccagaa tggtcttcag gttctctttc
     2521 gaattttctc cagcctgcca gcgcctgctc cagcgctgca tggaagcagg aataggattt
     2581 tgcgcccgcc acgcgccgtt tgcgtattgg taaaaatccg tacatggatc ggctgtcttg
     2641 tccatatcgc tgagctgaat gctctgggcg gtgttctgca gcgtcccgca gccacccacg
     2701 gccgggatgg tgacca
//
LOCUS       DASQYP010000022         9465 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_43064, whole genome shotgun sequence.
ACCESSION   DASQYP010000022 DASQYP010000000
VERSION     DASQYP010000022.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 9465)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9465)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9465
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_43064"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..558)
                     /gene="cydB"
                     /locus_tag="VE783_00640"
     CDS             complement(<1..558)
                     /gene="cydB"
                     /locus_tag="VE783_00640"
                     /EC_number="7.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR00203.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016682 - oxidoreductase activity, acting
                     on diphenols and related substances as donors, oxygen as
                     acceptor [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome d ubiquinol oxidase subunit II"
                     /protein_id="HYX51927.1"
                     /translation="MEFIWFWLVAIMITGYVVLDGFDLGAGVMHLFIARTDEERRTVI
                     RTIGPVWDGNEVWLLAGGGTLYFAFPLLYASSFSGFYLPLMIVLWLLILRGIGVELRL
                     HMDSPVWRGFFDGCFAISSILLAVFYGAALGNVIRGVPLQKDGYFFLPLWTNWNVGRD
                     PGVLDWYTVIAGVVALVALSVHGANY"
     gene            complement(568..1932)
                     /locus_tag="VE783_00645"
     CDS             complement(568..1932)
                     /locus_tag="VE783_00645"
                     /inference="COORDINATES: protein motif:HMM:NF013791.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_component: GO:0070069 - cytochrome complex [Evidence
                     IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0019646 - aerobic electron transport chain
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome ubiquinol oxidase subunit I"
                     /protein_id="HYX51928.1"
                     /translation="MDSTLLLHRLHFAFTVTFHYLFPQLTMGLAPLIVVLKTMAMRTR
                     NSHYNDAARFWAKLFGINFIMGVVTGIPMEFQFGTNWSHFARVTGGVIGQPLVMEGVF
                     AFFLESAFLGLFLYGEKRLSPRGHWWAAFLVFVGSWISAFFIIVTDAWMQHPVAFERG
                     PDGQFNVVSFWGLLLNPWALVQFAHNMCGALITGAFVMSAVGAYYLLEGKFADHGRTY
                     LRVGVTAGVIACLAAVFPTGDEQGRLLAKHQPVTTAAMEGLFKSETGAPIVILGQPDE
                     EHERIDNPLVANKVLSFLIYGTTAAEVKGLNEFSKDQWPTNIPLLYYSYHIMAGLGTL
                     FVAVMALSAFLLWRGKLFDSRWMLWIIMLCLPFPYVANTAGWMTAEVGRQPWLVYGLM
                     RTTEGYSKYVHAGNSLFTLLGFMGMYTLLAVLFLYLMHHEIGRGPATTTPREVGSGIP
                     ITVA"
     gene            complement(2092..2781)
                     /locus_tag="VE783_00650"
     CDS             complement(2092..2781)
                     /locus_tag="VE783_00650"
                     /inference="COORDINATES: protein motif:HMM:NF013936.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemerythrin domain-containing protein"
                     /protein_id="HYX51929.1"
                     /translation="MEESRRNFLIGSSAAITGTIVTPFSALAAPPQKKKQEKEQEDDV
                     STNEDLMREHGVLNRVLLIYDEANRRIAGGKPDFDPEIVNKAAGLIKKFIEEYHEKLE
                     ENYLFPRFEKANKLADLTKVLRAQHAAGRTVTGRIISSVKSKDLQAAGTAMAAFVRMY
                     RPHESREDTVLFPALHSIVSKHEYDALGEEFDKIEQKTFGGDGFDMAVDQVTALEKQI
                     GIYDLAQFTPK"
     gene            complement(2797..4158)
                     /locus_tag="VE783_00655"
     CDS             complement(2797..4158)
                     /locus_tag="VE783_00655"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX51930.1"
                     /translation="MRKILRAISFITVMIVGQFGLAQEAGHEQHQHSMEMPKQQEQSS
                     QMAQRNLGSHEHGTFVDEILSHVTPGTSAEPNSIEEPMYMRPLGSWMFMFHGAAFLNL
                     QQQSGPQGGDKAFSTNWAMPMFQYKQERSELTLRAMFSLEPATITQRLYPELFQQGET
                     AFGRPITDGQHPHDFLMEIAALYDHRVAKDALLSFYAAPVGDPAMGPAAYEHRMSAAE
                     DPLAPLGHHLEDSTHIADDVLIGGFTYKRARIEASGFHGREPDEFRWNLDYGAIDSWS
                     TRFTVQPGKNWSAQYSFAHLTSPEQLHPEEDLQRMTASVMYNRPLENGNWSSLLLWGR
                     NHSLASAMNTNGYLVESTLRFAQRNNLWTRIENVDRTTELLLGGQPEPPGFQEGFLAR
                     VQAYTFGYDREFAWFPGVSTAIGGQVTFYGKPEALTPIYSQHPTGGVLFLRVRPASEM
                     HHH"
     gene            4366..5670
                     /locus_tag="VE783_00660"
     CDS             4366..5670
                     /locus_tag="VE783_00660"
                     /inference="COORDINATES: protein motif:HMM:NF014385.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HYX51931.1"
                     /translation="MVVTAASQQPSSPSAPLTLTLQDALSRARANSIQFQAAQTDAAV
                     AHQDTVQARAGLLPSVNYHNEYLFTQGTGGVPETPANPGAATTGTPRFIANNAVHEYA
                     SQGIAEETLSFAQWSDYRRARALEAVARAKSEIASRGLVVTVVQDYYGLLSAQRKYAN
                     AQLAATEAQGFLDLSRKLEHGGEVAHSDVIKAQIQANDRQRDLREAQLAMDKARLELA
                     VMLFPSFEENFTIIDDAELAPPLSSFEDFAHLAQANNTDVRLSNAALNAAGRELASAR
                     AGYLPSLTLDYFYGIDAPQFATHGPDGVNNLGYSASATLNIPIWNWGATRSKVLQAGL
                     RQKQAQRELSLTQRKLLADIRTLHAEAAAALAELDLLKSSADLAAEGLRLTNLRYQGG
                     EATVLEVVDAQNTLMQARNSWSDGAVRYRTALANLQTLTGTM"
     gene            5667..6788
                     /locus_tag="VE783_00665"
     CDS             5667..6788
                     /locus_tag="VE783_00665"
                     /inference="COORDINATES: protein motif:HMM:NF027890.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HYX51932.1"
                     /translation="MTFRLMGNRHPIRLVVLVLCWAALIGCGKKEEEQQPEVTVQVVA
                     AKKADISRVVTAEAVLFPVAQSIITPKISAPVKKFYVNRGQKVRRGQLLAELENRDLS
                     ASALDNKGAFEQAEATYNTSVNATLPEEVQKTELEVQTSQQELDAAQKLYSSREDLFK
                     QGALPRKDMDAAAVQLAQAKSAYNTAKKHLDSLNAVGKQSTLKSAGGQLTSARGKLMA
                     SEAQLSYSQIRSPIDGVVTDRPLYPGEMASTSAPLMTVMNISQVIAKAHISQNDAALL
                     RKGDKAAIALSGADQKFPATVTVISPALDPNSTTVEIWVQAANPDQQLRPGTSAQIAI
                     NAQTVHDAIVIPASALLDASQGQAHVMVVDAQRSRTNVR"
     gene            6854..6979
                     /locus_tag="VE783_00670"
     CDS             6854..6979
                     /locus_tag="VE783_00670"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX51933.1"
                     /translation="MSSGAYGLPDKTKVKIQQTEDAEKSEAPERKPAPKSKEDKD"
     gene            6981..>9465
                     /locus_tag="VE783_00675"
     CDS             6981..>9465
                     /locus_tag="VE783_00675"
                     /inference="COORDINATES: protein motif:HMM:NF013069.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HYX51934.1"
                     /translation="MADGPSVTNRESSAEGRRFWFERYSSSLIFLIIVVALVGVYLAF
                     TIPVSVFPETNFPRIVVGADAGVMPIDQMMVTITRPLEQAVNSVPGLQSVRSTTSRGS
                     AELDLFFNWNVDMFQTLQLVNSALGRIETDLPPGTKITANRLTFASFPILGYSLTADN
                     VPQTQLWEMATYDIAPRLNRMEGVATVVVQGGQEPEFHVVPDPAKLLQASVTVTDLLN
                     AVKAANVIDSPGLFERNHQLVLGLVSGQVHSAEELSKVVVKITPAGIPVRLGDVAAVQ
                     QAVKPVYTIVRAEGKPAVLLNINRQPDSNTVAVADAVNSEVAAIQRTLPPGVRLRSFY
                     DQSGIVRDSISSVRDAILIGLVLSSLVLILFLRDWGTSLVAGLVIPVTVLVTFIALKL
                     LGQTFNLMTLGGLAAAVGLVIDDAIVVVENIVLHRDAGEGRLESIQSALSEITAPLVG
                     STLTPIVVFLPLISITGVTGTFFRALAITMGAALLTSLVLALLWTPTLSRYFIRRAEV
                     DGESREALDIDHEMRRLMEAEEKSIQGFFRRVIVFYERWLRRALEHPWFLAAGCALLV
                     IIGAAAYFYLGSDLLPEMDEGGFVLDYLSPAGSSLQETDRMIAHVEQILRAIPEVEST
                     SRRTGLQLGLAAVTEANRGDISVKLKPRRSRDIEKIIAEVRSTVAKQEPALDIEIIQS
                     LQDMIGDLTGQPEPVVIKLFGNDTKLLEQQAPRVADAISKIDGVVDLKNGIENTISGP
                     ATTFNVNPSVASRAGFSTEEVSTDATALLQGVPAAEPLVANDRAYTIRVRFPDQNRSS
                     LQAMNNTLLTSSTGKTATLGGLATLVEQAG"
BASE COUNT         2080 a         2754 c         2701 g         1930 t
ORIGIN      
        1 atagtttgct ccatggaccg aaagcgccac cagcgccact acgccggcaa tcacggtgta
       61 ccagtcgagc acgccgggat cgcggccaac gttccagttg gtccacagcg gcaggaagaa
      121 gtagccgtcc ttctgcagcg ggacgccacg gatcacgttg ccgagtgcag cgccgtaaaa
      181 gaccgcgagc agaatgctgg aaatggcaaa gcagccgtcg aaaaagccgc gccatacggg
      241 cgaatccatg tggaggcgca gttccacgcc gataccgcgc aggatcagca gccagagcac
      301 gatcatcagc gggagataaa agccgctgaa gctggaggca tagagcagcg ggaaggcgaa
      361 gtagagcgtg ccgccgccgg cgagcagcca gacttcattg ccgtcccaca cgggacctat
      421 ggtgcggatc acggtgcggc gttcttcatc cgtgcgtgca atgaagagat gcatgactcc
      481 ggcaccgagg tcaaagccat cgagcaccac gtaaccggtg atcatgattg cgacgagcca
      541 gaaccagatg aactccatgc gctcctccta tgccaccgta atggggatgc cggaaccgac
      601 ttcgcgcggc gtggttgtgg ccggtccgcg gccaatctca tggtgcataa ggtagagaaa
      661 cagaacggcc aacaaggtgt acatgcccat gaagccgagc agggtaaaga ggctgttgcc
      721 ggcgtgaacg tatttggaat agccctcggt ggtgcgcatc agaccgtaaa ccagccaggg
      781 ttgccggccg acttcggccg tcatccagcc tgccgtgttc gccacgtagg gaaacggcag
      841 gcacaacatg atgatccaga gcatccagcg cgagtcgaaa agcttgccgc gccacaggag
      901 aaaggccgaa agcgccataa cggcgacgaa cagcgttcca agtccggcca tgatgtgata
      961 gctgtaataa agcagcggaa tgttggtggg ccactggtct ttggaaaatt cgttcagccc
     1021 tttcacctcg gcagcagtgg tgccataaat cagaaagctc aggaccttgt tcgcgaccag
     1081 cggattatca atgcgttcgt gctcttcatc gggctggcca aggatgacga tcggcgcgcc
     1141 ggtttcggac ttgaaaagtc cctccatagc cgcggtagtt acgggctgat gcttcgcgag
     1201 caagcggccc tgttcatcgc cggtggggaa tacggcggcg aggcacgcga tcactcccgc
     1261 cgtcacgccc acgcgcaggt aagtgcgtcc gtggtcggcg aacttgcctt ccagcaggta
     1321 gtacgctccg acggcggaca tgacaaacgc tccggtaatc aatgcgccgc acatgttatg
     1381 cgcgaactgc accagcgccc agggattcag cagcagtccc cagaagctga ccacgttgaa
     1441 ctgaccatcc gggccgcgtt caaacgcaac gggatgctgc atccatgcgt cggtaacgat
     1501 gatgaagaaa gccgagatcc acgaaccgac aaataccagg aaagccgccc accaatggcc
     1561 gcgggggcta agtcgctttt cgccgtagag gaacaatcca agaaatgcgg attccagaaa
     1621 gaaggcaaac acgccttcca tcaccagcgg ctggccaatc acgccaccgg ttacgcgcgc
     1681 gaaatgagac cagttggtgc cgaactggaa ttccattggg attccggtca ccacgcccat
     1741 gatgaagttg atgccaaaca gtttcgccca gaaccgcgct gcgtcgttgt aatggctgtt
     1801 tctggtgcgc atcgccatgg ttttcagcac cacaatgagc ggcgccagcc ccatagtgag
     1861 ctggggaaac aagtaatgga atgtgacggt aaaggcaaaa tgcagccgat gaaggagcag
     1921 ggtgctatcc atctgatctc cgtccttgct ggccagagag acacctccgc aagagtcacg
     1981 gaaacacccc tgaccagaat ggataacaaa aaatttagca aagccgttcc gcaccggagt
     2041 gtgatgaata tcacgaatcc gcagcggtgc tgccggaagc tcaaaccgga gctacttcgg
     2101 cgtgaactgc gccagatcgt agatgccgat ctgcttttcc agcgcggtaa cctggtcaac
     2161 ggccatatcg aatccgtcgc cgccgaaagt cttctgctcg atcttgtcga actcctcgcc
     2221 cagcgcgtcg tactcatgct tgctgacgat ggagtgcaga gcggggaaga ggaccgtgtc
     2281 ttcccgcgat tcgtgcggac gatacatgcg cacgaaagca gccatcgctg tgcccgctgc
     2341 ctgcaggtct ttgcttttca cggaagagat gatgcgaccg gtaaccgtgc gtcctgcggc
     2401 gtgttgcgcg cgcagaactt tggtgagatc ggcaagctta ttggcttttt cgaatcgcgg
     2461 aaacagatag ttctcttcca gcttttcgtg atattcctcg atgaattttt tgatcaaacc
     2521 agcagccttg ttcacgatct ccggatcgaa atccggcttg ccgccagcaa tccgccggtt
     2581 ggcttcgtcg taaatcaaca gcacgcggtt caagacgccg tgttcgcgca tgaggtcctc
     2641 attcgtggag acatcatctt cctgctcttt ctcctgtttc tttttctgcg gcggcgcggc
     2701 gagcgcgctg aaaggagtga caatggtgcc ggtgattgcg gcagagctgc cgataagaaa
     2761 attacgacga gattcttcca tgaagctggc tcctcactag tgatgatgca tctccgaggc
     2821 aggacggact cgcaagaata atacgccacc cgtcggatgc tggctgtaga taggggtgag
     2881 ggcttcaggt ttgccgtaga acgtgacttg accgccaatt gctgttgaaa ctccggggaa
     2941 ccatgcaaat tcgcgatcat agccaaatgt ataagcctgt acgcgggcaa ggaagccctc
     3001 ctgaaatccc ggcggttcgg gctggccacc gaggagcaat tcggtggtgc gatccacgtt
     3061 ctcgattcgc gtccacagat tgttgcgctg cgcgaaacgc agcgtcgatt ccaccaggta
     3121 tccgttggtg ttcatcgcgg aagcaagact atggttgcgt ccccagagca gaagcgatga
     3181 ccagtttcca ttctcaagcg gccggttata catgaccgaa gccgtcattc tctgcaggtc
     3241 ttcttccgga tgcagctgct ccgggctcgt gagatgcgca aacgagtatt gcgcgctcca
     3301 gttctttccc ggctgcacgg tgaaccgcgt ggaccatgaa tcgatcgcgc cgtaatccag
     3361 gttccagcga aactcatccg gctcgcgacc atgaaatcca gaagcctcaa tacgagcgcg
     3421 tttgtaggtg aagccgccga taagcacgtc atcggcaatg tgcgtggagt cttccagatg
     3481 atggcccagc ggagccagcg gatcctcagc ggcggacatg cggtgttcgt atgcagccgg
     3541 gcccatcgca ggatcgccga ccggcgcagc atagaaggaa agcagtgcat ccttggcgac
     3601 acgatggtcg tagagcgctg ctatctccat caggaaatcg tggggatgtt gtccatcggt
     3661 gatcggccgt ccgaaggcag tctcgccctg ttgaaacagc tccgggtaaa ggcgttgcgt
     3721 tatggtcgcc ggctccaggc tgaacattgc tcgaagcgta agctcgcttc tctcctgctt
     3781 gtactggaac atgggcatcg cccagttcgt agagaatgcc ttgtcgcctc cttgtggccc
     3841 gctctgttgt tgcagattga ggaaggcagc tccgtgaaac ataaacatcc acgatccgag
     3901 aggtcgcatg tacatcggtt cctctataga attcggctcg gcgctggtcc ccggagttac
     3961 gtgggaaaga atttcgtcca caaacgtccc gtgttcatgc gatcccagat tgcgctgcgc
     4021 catttgactg gactgctcct gctgcttggg catctccatg gaatgctggt gctgttcatg
     4081 gccggcctcc tgcgccaatc caaactggcc cacgatcatg acagtgatga aacttatggc
     4141 acggagaatc ttccgcatct cgtcctttgt ggtgtgacta aaagacgatc tttatcggaa
     4201 agggcgagcg gttgttgatg aagtttgcat ccattgtaac cagcggcacc tcgggtattc
     4261 tgcggttctg catctattaa gattaaatgt cttgttcgtg attcgaaatc ccagggaggc
     4321 gttgtgcgtt cccgactttt gcttctgatc tccttttcat ttggaatggt tgttactgca
     4381 gcttcccaac agccatcttc accttctgca ccgctcacgc tcactctgca ggatgccctc
     4441 agccgcgccc gggccaacag catccagttt caggcagcgc agaccgatgc agcagttgct
     4501 catcaggata cggtgcaggc gcgtgccggc ttgttgccca gcgtgaacta ccacaacgaa
     4561 tatctgttca cgcagggaac cggtggcgtt ccggaaactc ccgccaaccc aggcgcagcc
     4621 acaaccggca cgccccggtt cattgccaac aacgccgttc acgaatacgc gagtcagggg
     4681 attgcagaag aaactctgag cttcgcgcag tggtcggact atcgccgcgc acgcgctctc
     4741 gaagcagtcg ctcgcgcgaa atctgagatc gcctcgcgcg ggcttgtggt caccgtggta
     4801 caagactatt acggactcct ctctgcccag cggaaatatg ccaacgcaca gctggccgcc
     4861 acggaagcac agggctttct cgatctcagc cgcaagctcg aacacggcgg agaggtggcg
     4921 cactctgatg tgatcaaggc acagattcag gcgaatgatc gccagcgcga ccttcgcgaa
     4981 gcgcagctcg ctatggataa agcgcgactg gaactcgctg ttatgctttt ccccagcttc
     5041 gaagagaact tcaccatcat tgacgatgcc gagctggcgc caccgctctc ctcctttgaa
     5101 gattttgccc acctcgctca agcgaacaac accgacgtgc ggctctccaa cgccgccctg
     5161 aatgctgcag gccgtgagct tgcatctgcg cgcgccgggt atctgccttc gctcacgctg
     5221 gattacttct acgggattga tgcgccgcaa ttcgccaccc atggtcctga tggggtgaac
     5281 aatctcggct attcggcgtc cgccacgttg aatattccca tctggaactg gggcgccacg
     5341 cgcagtaagg tcctccaggc agggttgcgg caaaagcagg cccaacgcga gctttcgctc
     5401 acccaacgca agctactggc tgatatacgg acactgcatg ccgaagctgc ggcagcgctt
     5461 gcagaactgg acttgctcaa gagctcagcc gatttggcgg ccgaaggtct gcgcctgacc
     5521 aacctgcgtt atcagggtgg cgaagccacc gtgctggaag tggttgacgc ccagaatacg
     5581 ctcatgcagg cacgcaactc ctggagtgat ggggcggtcc gctatcgtac ggcactcgcg
     5641 aatctgcaga ccttgacagg tacaatgtga cctttcgact catgggaaat cgccatccaa
     5701 tccggctcgt tgtgctcgtc ctgtgctggg ctgccctgat cggctgcggc aagaaagaag
     5761 aagagcaaca gcccgaggtc acggtgcagg ttgttgcggc gaaaaaggcg gacatctcgc
     5821 gcgtagtgac cgcagaagcc gtacttttcc cggtggcgca atccatcata acgccgaaaa
     5881 tcagcgctcc agtcaagaag ttctatgtaa accggggaca aaaggtccgc cggggacagc
     5941 tgctcgccga gcttgaaaac cgcgatctct ctgcatcagc gctcgacaac aaaggcgctt
     6001 ttgagcaagc tgaggccacc tacaacacca gcgtgaatgc aacgcttccg gaggaagtac
     6061 agaagactga gctggaagtg cagacatccc agcaggagct tgatgcagcg caaaagctct
     6121 actccagccg ggaagacctc tttaagcaag gcgcgttgcc gcgtaaggat atggacgccg
     6181 cagcggtgca actggcgcag gcaaaatcgg cttacaatac ggcaaagaaa cacctggatt
     6241 ccctgaacgc tgtgggaaaa cagtcaaccc tgaagtccgc cggcggccag ctcacctcgg
     6301 cgcgcggcaa gctaatggct tcagaagcgc agctgagcta ctctcagatt cgcagcccaa
     6361 tcgacggtgt cgtcacagat cgtccgctct atcctgggga aatggcctct acatctgcgc
     6421 cgctgatgac cgtgatgaac atttcccagg ttattgcgaa agcacacata tctcagaacg
     6481 atgctgcgct gctgcgcaag ggcgacaaag ccgccatcgc tctctccgga gcagaccaga
     6541 agtttcccgc gacagtcacc gtgatcagtc ccgccctcga tcccaacagc accaccgtgg
     6601 agatctgggt tcaggctgca aatcctgatc agcagcttcg gccaggcacg agcgctcaga
     6661 tcgcgatcaa tgctcagaca gttcatgatg caatcgtcat tccggcatcg gccctgcttg
     6721 atgcttctca gggtcaggcg catgtcatgg tcgtggacgc tcaaaggtcg cgaaccaacg
     6781 tgagataaga accggaatca ttacctcgga cgaagcgcag gtcatttccg gcctgcagcc
     6841 cggtgataat gttgtgagta gcggcgccta tggtctgccg gacaagacca aagtgaaaat
     6901 tcagcaaact gaggacgctg aaaagagcga agctccggaa cgcaaaccgg caccaaagag
     6961 caaggaagac aaggactgaa atggccgatg gtccgagcgt tacaaatcgc gagagcagcg
     7021 ctgaaggaag gcgcttctgg tttgagcggt attccagctc gctgattttc ctgatcattg
     7081 ttgtcgctct ggtcggcgtg tatctcgcct tcaccatccc ggtatcagtc tttccagaaa
     7141 cgaattttcc ccgcatcgtg gtaggcgccg atgccggagt catgcccatt gatcaaatga
     7201 tggtcaccat cacacggccg ctcgaacagg ccgtgaacag cgttcccggg ctgcaatctg
     7261 tgcgttccac caccagccga ggttcagccg agctcgactt gtttttcaac tggaacgttg
     7321 acatgtttca aaccctgcaa ctggtcaact ctgcgcttgg ccggattgag actgaccttc
     7381 cgccaggaac aaagatcacc gccaatcgtc tgacctttgc ttcgttcccg atccttggct
     7441 acagcctcac tgcggacaat gtcccgcaga ctcagctctg ggagatggcg acctatgaca
     7501 ttgctccgcg gctgaaccgc atggaaggtg ttgccaccgt cgtggttcag ggagggcagg
     7561 agccggaatt tcacgttgta ccggacccgg ccaaactgtt gcaggcatct gtgactgtca
     7621 ctgatctgct gaacgcggtg aaggccgcca atgtcatcga ttcgcccggg ctctttgaac
     7681 gtaaccacca gcttgttctc gggctggtga gcggtcaggt gcacagcgcg gaagaactct
     7741 cgaaggtggt ggtgaagatc acgccggcgg gaattcccgt caggctcggt gatgtggccg
     7801 cagtgcagca ggcggtgaag ccggtctaca caatcgtgcg cgcagaagga aagccggcag
     7861 tactgctcaa catcaaccgc cagccagata gcaacacagt ggctgtagcc gacgcggtga
     7921 acagcgaggt agcggcaatt caacgcacct tgcctcccgg cgtccgtctc cgcagcttct
     7981 acgaccaatc aggcatcgtc cgtgactcca tcagcagcgt ccgcgacgcc atcctgatcg
     8041 ggctggttct atcctcactg gtactgattc ttttcctgcg cgattgggga acttctctgg
     8101 ttgcaggcct ggtaattcct gtcaccgtac tggtgacttt tatcgcgctc aagctgctgg
     8161 gccagacctt caacctgatg acgctgggcg gcctcgccgc cgcggtcggt ctggtgattg
     8221 atgatgccat cgttgtggtg gaaaacattg tcctgcaccg cgacgctgga gaaggccggc
     8281 tggagtcgat ccaaagcgcg ctgtctgaaa tcaccgcgcc gctggtcggc tcaacgctca
     8341 cgcccatcgt tgtttttctg ccgctgatct ccatcaccgg ggtcaccgga acattcttcc
     8401 gcgctctggc catcaccatg ggggcggctt tgcttacctc gctggttctg gctcttctct
     8461 ggactcctac gctcagccgg tacttcatcc gtcgcgctga agtggacggc gaatcgcggg
     8521 aggctcttga tattgatcac gagatgcgcc gtctcatgga ggcggaagag aaatctatac
     8581 agggcttctt ccgtcgcgtt atcgtgtttt acgaacgctg gctccgccgc gcacttgagc
     8641 atccctggtt cctggcggcc ggctgcgcgc tgttggtgat cattggagca gcagcctact
     8701 tctacctggg ctctgatctg ctcccggaaa tggatgaagg cggattcgtt ctggactatc
     8761 tctcgcccgc agggagttcg ctccaggaaa cggaccgcat gattgcgcac gtggagcaga
     8821 ttctccgtgc tattccggag gtagaaagca catcacgccg taccggtctt caactcggtc
     8881 tggctgcggt aacggaagcg aatcgtggtg acatttccgt caagctcaag cccaggcgca
     8941 gtcgcgacat cgaaaagatt attgctgaag ttcgctccac tgtggcgaaa caggagccgg
     9001 cgctcgatat tgagatcatt cagtcgttac aggacatgat cggtgacctc accgggcagc
     9061 ccgaacccgt ggttatcaaa ctttttggca atgatacgaa gctcctggaa cagcaggcgc
     9121 cccgcgtggc cgatgccatc agcaagattg atggtgtcgt cgatcttaag aatggaatcg
     9181 agaacacgat cagcggtccg gcaacaactt ttaacgtgaa tcccagcgta gcctcgcgag
     9241 ccggcttcag cacggaagaa gtctctaccg atgccacagc tttgttgcag ggggttccgg
     9301 cagccgaacc tctggtggcc aatgaccgcg cctacaccat ccgcgtccgg ttccctgacc
     9361 agaaccgctc ttcgctgcag gcgatgaaca acacgctcct caccagcagc accggtaaga
     9421 cggccacact gggcgggctg gcaactctgg ttgagcaggc cggtc
//
LOCUS       DASQYP010000023         2019 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_297195, whole genome shotgun sequence.
ACCESSION   DASQYP010000023 DASQYP010000000
VERSION     DASQYP010000023.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 2019)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2019)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2019
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_297195"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..652)
                     /locus_tag="VE783_00680"
     CDS             complement(<1..652)
                     /locus_tag="VE783_00680"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX51935.1"
                     /translation="MKLSFKLLFPLLVLCSAPVFAQSCNTREEIPDQTRTALETAARQ
                     TFDQASRGDVEGLRANAIPSLQGNFNGIAGAVNDNKPALAGAAPQIRTEFLIDNEPTP
                     STDGRFYCGVFGANGLPPNGAEFDIPNLPAGKYALVIQDAVGSKGPYALSTIYQDMNG
                     WKLAGFYVRPGAVLGHDGFWYLQQARDFKTKGQNHNAWFYYVTSWDLLAPVTFMDTR"
     gene            1096..1752
                     /locus_tag="VE783_00685"
     CDS             1096..1752
                     /locus_tag="VE783_00685"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX51936.1"
                     /translation="MGPPAPTPTPMVAMRPADMPPAPPKVTFRNGMLTVEAVNSSMAG
                     LLQAIRNKTGIEFEGGENSGERVAVTAGPAPEAEVLAAIFSGSGFDYVVVGRSDSPGI
                     VQRVLLTPKARNGQTMNAGAAQPPPGQQQQAPEGDEEAQDDASAPDADPQDTAAQPPA
                     EAQQQPAQPQGTEQQQNGPKTPEQLLQELKEMQQKQQQQQGAPPPNTQAVPRKPAPPR
                     "
BASE COUNT          444 a          647 c          543 g          385 t
ORIGIN      
        1 gtcgcgtatc catgaatgtg accggcgcaa gcaggtccca tgacgttacg taatagaacc
       61 acgcattgtg gttttgtccc ttggtcttga aatcgcgggc ctgctgcagg taccagaagc
      121 cgtcatgacc aagcaccgcg cctgggcgaa catagaaccc ggccagcttc cagccattca
      181 tgtcctgata gatcgtgctc agagcgtaag gtcccttgct gcccaccgca tcctgaatca
      241 ccagcgcgta tttacccgcc ggaaggttgg gaatatcgaa ctcggctcca ttcggcggca
      301 ggccatttgc gccgaacacg ccgcagtaga agcggccatc agtgctgggc gtcggctcgt
      361 tgtcaatcag gaactccgtg cgaatctgcg gagcggcgcc ggccagtgca ggtttattgt
      421 cattcacggc gccggctatg ccgttgaaat tcccttgcaa cgaagggatc gcattcgccc
      481 gcaggccttc aacgtcgcct ctgcttgcct gatcgaaggt ctggcgagca gccgtttcca
      541 aagccgttct ggtctggtcc gggatttctt cgcgcgtgtt gcagctttgg gcaaaaacag
      601 gcgcactgca caacactaga agcgggaaca ggagtttgaa gctcaatttc attgaatcat
      661 acctaaatgg gtcagacgca actctgactg cctttgtaag atgccgccgc ccggcatggc
      721 agatgtattc ccctctgctt caccaatata acgccgaaaa aggacccggt ttgagttcgt
      781 tccgtcaatc ggaactcttt gtaccttcct gagcaagaac ggtttccagc ggcgttctta
      841 accagaagga gtaaaatagg ttcaggtact ccaaaaaaga cagccgaatc cagcgcacgc
      901 cttatgatac gttccccgag atcgttctgc agcctcgtcc tgatccttgg cggagtgtcg
      961 ttcgcccaat ttccgccgca gagacgtccg caaccgcaga cgcagaccgg gactagtcca
     1021 gcaccgcaaa agcctgcgca acctggcgca gcgccggcag gacagccacc cgcgggggga
     1081 aacaatcagg taatcatggg tcccccagct cccactccca cccccatggt cgcgatgcgg
     1141 cccgcagata tgcctccggc gcccccaaaa gtcacgtttc gcaatggcat gctaacggta
     1201 gaagctgtga actcgtccat ggcggggctg ctgcaggcaa tccggaataa aacagggatc
     1261 gagttcgaag gtggagaaaa ctctggcgag agagtcgccg taaccgccgg tccggctcca
     1321 gaagccgagg tgctggcggc catcttttct ggctctggat tcgattacgt agtcgtaggc
     1381 cgctcagata gtcccgggat agtgcagcgc gtccttctta ctccaaaggc gcgcaacggc
     1441 cagacgatga acgcaggcgc ggctcagcct cctcccggcc agcaacaaca ggccccggaa
     1501 ggcgacgagg aagctcagga cgatgcttct gcccctgatg ccgacccgca ggacaccgcg
     1561 gcccaaccgc ctgcagaagc ccagcagcaa cctgcgcaac ctcagggaac ggaacaacag
     1621 caaaatggcc ccaagacccc tgagcagcta ctgcaggaac tcaaggaaat gcagcagaag
     1681 cagcaacaac agcagggcgc tccaccgccg aatactcaag ctgttccgcg caagccggcg
     1741 ccgccgcggt agcggccagg gccgcccagt tcagcccgcc ttacgctccc gcgcaggctc
     1801 ctgacgaaac ctgccttatc acgccagatg cctctttggg cctcaatttc acgctcgttt
     1861 tgccagatca gggctgatat cctttcccca ccctgcacca gcccccttgg aggccgatct
     1921 catttatgcg ccacaaactc tggacggcag cctgctttgt attgctggcg ttgcccctgc
     1981 atcactccct ggctcagtct caacactctc aatcacact
//
LOCUS       DASQYP010000024         3442 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_297317, whole genome shotgun sequence.
ACCESSION   DASQYP010000024 DASQYP010000000
VERSION     DASQYP010000024.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 3442)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3442)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3442
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_297317"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1776
                     /locus_tag="VE783_00690"
     CDS             <1..1776
                     /locus_tag="VE783_00690"
                     /inference="COORDINATES: protein motif:HMM:NF012700.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX51937.1"
                     /translation="KAAAALLQRRHGLLGNVRLVWFVIMAVLTWSIVRNGTPSAWWLL
                     AALIVFFTLGVIDGRIVRRLERAQRSTRFFERGLQRIRDDWSGLGPSGQEFKTPDHLY
                     SEDLDILGEGSLFQLLCTARTRMGRKTLAGWLLAQDHPGSNETTEVLERQLAVAELRR
                     KLALIEDLAVAGHDEEIHADPEYLREWSCPAGDEKRVQPRQQAWLAILSVLSFAALAW
                     GLKGAFATGRGFFTPFIVLLVLNGFINYRWRQPMEKLFAGLEHSCRNLESLAELIRRI
                     EAEQFESPLLLRIKAQLVGEQLSAAVAIAKLGTLCDLEGSRHNVFVRVFDLPVLYTVH
                     TALMLERWRQRHGTHVPAWLDALGRLEALLSLATYSVEHPDDPFPELVDPGSAMFEGE
                     ALGHPLLPAGTCVRNSASLGAASRIMLVSGSNMSGKSTYLRAIGVNAVLAMCGAPVRA
                     RHLRLSPLAIGASIHISDSLQKGVSNFYAEITRIRNVVELSRNSPTLFLFDEVLQGTN
                     SEDRHAGSSAVVRTLLKNGAIGLITTHDLALAEMEASFPGALRNVHFQESMSEGRLSF
                     DYQLRPGVVRSRNGLELMKSIGLEV"
     gene            complement(2551..2937)
                     /locus_tag="VE783_00695"
     CDS             complement(2551..2937)
                     /locus_tag="VE783_00695"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX51938.1"
                     /translation="MRRGPVLSVEMVLEELKMPLLNHGRQPERVYLVLQKHERQVYVS
                     SSDEDVEQQLEGLMSDMWVPLGLVAFYAETPQPVVSPLNWYADLLVRDEQKYMQLCRT
                     VSECLGEASRRLTHELSETRVIPRIH"
     gene            complement(3029..>3442)
                     /locus_tag="VE783_00700"
     CDS             complement(3029..>3442)
                     /locus_tag="VE783_00700"
                     /inference="COORDINATES: protein motif:HMM:NF014471.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015109 - chromate transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015703 - chromate transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chromate transporter"
                     /protein_id="HYX51939.1"
                     /translation="RWLTEKQLLDAISVGQFTPGPVFTTATFIGYLIAGVPGAIVSTI
                     GIFLPGFFLVAASGPIVRNVRRHPIAAAAFDGVNVASLALMAVVAIQLGKAAVVDPVT
                     AMIAAVTLVVLLRTRVNPAWTIAGGAVLGVIKSLF"
BASE COUNT          695 a         1025 c          961 g          761 t
ORIGIN      
        1 aaagccgcag ccgcgttatt gcagcgccgc catggcttgc tggggaacgt acgcctggtc
       61 tggttcgtaa ttatggcagt gctcacctgg agcatcgtcc gtaatggcac gccttcagct
      121 tggtggttgt tagctgcact catcgtattc ttcaccctgg gagtaatcga tggccgcatc
      181 gttcgccggc ttgagcgtgc ccagcgatcc acgcgattct ttgagcgcgg cctgcaacgt
      241 atccgcgatg actggtccgg gcttggtccc tccggccagg agttcaagac gcctgaccac
      301 ctctattcgg aagatctcga cattctgggg gaaggtagtc tctttcaact gctctgcacg
      361 gctcgcacgc gcatgggtag aaaaacgctg gccggctggc tgctggccca ggatcatccc
      421 gggtcgaatg agactaccga agttcttgag cgccagcttg ctgtggcgga actccgccgc
      481 aagctagcgc tcatcgagga cctcgcggtc gctggacatg atgaagagat ccatgccgat
      541 cctgagtatc tccgcgaatg gagctgcccg gcaggcgatg aaaagcgcgt tcaacctcgc
      601 caacaagcat ggctcgctat tctctcggtt ttgagtttcg ccgcgttggc gtggggactg
      661 aaaggcgcgt ttgctaccgg acgcggcttc ttcactccct tcattgtcct cctggtactg
      721 aacggattca tcaactaccg ctggcgccaa ccaatggaaa agctctttgc cggcctggaa
      781 cactcgtgca gaaatctcga atcgcttgca gaactcattc ggcggataga agcggagcag
      841 tttgaatcac cactgctgct gcgcatcaag gcgcagctcg tcggcgaaca actttctgcc
      901 gccgtggcga ttgcgaaact cgggacgctg tgcgatctgg aaggttcgcg ccacaacgtc
      961 tttgttcggg ttttcgatct cccggtgctg tacacagtgc atacagctct catgcttgag
     1021 cgctggaggc agcgccatgg cacgcatgtt cctgcatggc ttgatgcgct tggccgatta
     1081 gaagccctgc tctcgcttgc aacttactcg gtcgaacatc ccgacgatcc ttttcctgaa
     1141 ttggtagacc ccggctcagc catgttcgaa ggtgaagcat tgggccaccc gcttcttccc
     1201 gcgggcactt gcgttcgcaa cagcgccagc cttggggccg ccagccgcat aatgctggtg
     1261 agcggctcca acatgtctgg caagagcacg tacttgcgcg ccatcggcgt gaacgccgtc
     1321 ctggcgatgt gcggagctcc ggtgcgcgcc aggcatctgc gtctctctcc cctggccatc
     1381 ggcgcttcta tccacatttc cgattctttg cagaaaggtg tctccaactt ttatgccgag
     1441 atcacgcgca tccgcaatgt ggttgaactc tcccgaaaca gtcctacgtt gttccttttc
     1501 gacgaagtgc ttcagggcac gaactctgaa gaccgccacg ccggcagcag cgcggtggtg
     1561 cgaacactcc tcaagaatgg cgcaatcggt ctcatcacca cgcacgacct cgccctcgcg
     1621 gagatggaag ccagcttccc cggcgcgctc cgcaatgttc acttccagga atcgatgagc
     1681 gaaggcagac tatcgttcga ctatcaactc cgtcccggtg tggtgcgatc gcgcaatggc
     1741 cttgaattga tgaagtcaat cggccttgaa gtttagctct cgccacagga aacaggggct
     1801 caatcgccat caagtttcgt tgatgcgcag ccgcgggccg tccacgcggc gagctgcatt
     1861 gccccaggcg cgagcgggct tttaccagga ctaagcgtct gaagcaattt ggggcggagc
     1921 gacataggcc caagccataa gaatttttaa tgagaagcta attctgtctt aagctcgcga
     1981 ttctaatctt gcaacgcttc agtttattgt tggcaacacg aaatttgcgg cggcacgcgc
     2041 gggttgtgcc gcggccagat cacattggga ccgcataggt tcttaatgcg gtgttactta
     2101 cagccgtgca gcgagagcac gcacaatctg tctcgcaagc gatagtcagt gctgccaata
     2161 atcccgcgaa gatgtgcttc catttttgtg gcgttatggc cggcacccga agagaacgtt
     2221 gtgtggtagg tctcgggtac tcaggtggct cgtggtccgg ccagcgcccc ccgcttgcgt
     2281 tggcttgttc tgcgcgctgc tgtaaacgga agtgctggcc agctcgggcc ggctcatccg
     2341 cgacccgtga ggggaccagg aatagcgacc cggcgcgatt ttggaaggcg atcactcccc
     2401 caaaacgtgt cgtccgtgcg gaattgctcg aacgtctccc cgctttggcg gaggagagcg
     2461 tcgcacccgt acagattccg ggtttcccag actgcttttt gcagtctcca ccaccaggga
     2521 ggccggcgct ttgccccgcc ggcctcttaa ttagtggatc cgcggaatca cccgagtttc
     2581 tgacaactca tgggtgagcc gtcgcgacgc ttcgcccaga cactcgctca cggtccggca
     2641 tagttgcatg tatttttgtt catctcgtac cagcagatca gcgtaccaat ttaaagggct
     2701 taccacgggc tgtggcgttt cagcgtaaaa cgccacaagt ccaagtggta cccacatatc
     2761 gctcataagg ccttccaact gctgctcaac atcttcgtcg ctggagctca cataaacttg
     2821 tctttcatgc ttctgcagaa caagataaac acgctcaggc tgccggccat ggttaagcaa
     2881 cggcatcttc aactcttcaa gcaccatttc taccgaaagt actgggcctc tgcgcatgag
     2941 ttatggtacg tctgatgttg aacgcagtgg cgagcgagcg tccttaatgg gcagcttttc
     3001 tgggcatcgg cttgcggtct gcgggcagtt aaaacagtga ctttatcact ccaagcacag
     3061 cgcctccggc aatggtccat gctggattga ctcttgtccg cagaagcaca accagggtga
     3121 ctgccgcaat catggcagtg accggatcga ccacggcagc cttgcccagt tggatcgcaa
     3181 caaccgccat cagcgccagt gacgccacat tgaccccatc gaaagctgcc gctgcaatcg
     3241 ggtgacgccg cacattgcgc acgatgggac cgctcgcggc gaccagaaaa aatcccggca
     3301 agaaaatccc aatggttgag acaatcgcgc cgggcacgcc cgcgatcaaa tagccaataa
     3361 aggtcgcggt ggtaaacacc ggcccggggg tgaattgtcc aaccgagatc gcgtctagta
     3421 gctgcttctc cgtgagccaa cg
//
LOCUS       DASQYP010000025         2338 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_22124, whole genome shotgun sequence.
ACCESSION   DASQYP010000025 DASQYP010000000
VERSION     DASQYP010000025.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 2338)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2338)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2338
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_22124"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..332
                     /locus_tag="VE783_00705"
     CDS             <1..332
                     /locus_tag="VE783_00705"
                     /inference="COORDINATES: protein motif:HMM:NF012656.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HYX51940.1"
                     /translation="NKAISEFQAIQWKLADMATEIDAARLLTMRAANMKDSGMKTTLE
                     SSMAKLYTGEVAVKCANECVQIHGGYGFIKDYPAEKFYRDVKLCTIGEGTSEIQRLVI
                     ARQLLKD"
     gene            344..1309
                     /gene="meaB"
                     /locus_tag="VE783_00710"
     CDS             344..1309
                     /gene="meaB"
                     /locus_tag="VE783_00710"
                     /inference="COORDINATES: protein motif:HMM:TIGR00750.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016772 - transferase activity,
                     transferring phosphorus-containing groups [Evidence IEA];
                     GO_process: GO:0015819 - lysine transport [Evidence IEA];
                     GO_process: GO:0015822 - ornithine transport [Evidence
                     IEA];
                     GO_process: GO:1903826 - L-arginine transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methylmalonyl Co-A mutase-associated GTPase
                     MeaB"
                     /protein_id="HYX51941.1"
                     /translation="MADTIQSWVERIRAGDVRALARAISVIEDGRPESLALLKALFHH
                     SGKAQVIGLTGAPGAGKSTLVDQLAREYRKQQKTIGIIAVDPTSPYTGGAILGDRIRM
                     QAHHADPGIYIRSMATRGFLGGLARATTDVATALDASGKDLVLIETVGVGQDEVDIVR
                     LADVTVVILVPGMGDDVQTIKAGIMEIADIFVINKSDRDGADRVEREIRAMQTLAIRK
                     DTWTPPIIKTVASEGKGIVELAAAIEQYEKFLREKDLLLKKKASNWRERLIDMLREAL
                     LQRLLQEQLQEADLGRIAIDIAEHRRDPYSLVEELVGNMSVAGKS"
     gene            1419..1832
                     /gene="mce"
                     /locus_tag="VE783_00715"
     CDS             1419..1832
                     /gene="mce"
                     /locus_tag="VE783_00715"
                     /EC_number="5.1.99.1"
                     /inference="COORDINATES: protein motif:HMM:TIGR03081.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylmalonyl-CoA epimerase"
                     /protein_id="HYX51942.1"
                     /translation="MSSHTIDHLGIAVKSLAQARKFYELLGLEIAEEEVVAQEKVKVA
                     MVELGESRIELLEPTSPDSVIAKFLEKRGEGLHHVALHVPDLTHAVEQLKASGARLIS
                     DEIKIGAGGHMYVFVHPSSAGGVLVELVQEVPSGV"
     gene            1983..>2338
                     /gene="tsaB"
                     /locus_tag="VE783_00720"
     CDS             1983..>2338
                     /gene="tsaB"
                     /locus_tag="VE783_00720"
                     /EC_number="2.3.1.234"
                     /inference="COORDINATES: protein motif:HMM:TIGR03725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003725 - double-stranded RNA binding
                     [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     dimerization subunit type 1 TsaB"
                     /protein_id="HYX51943.1"
                     /translation="MILLGIDTSGKSGGVALAEGDAHSFRVLGSAPISGGTFSAQLVP
                     TVAALLEQRKLSVHDVNGLCVASGPGSFTGLRVGLSAVKGLAEVLHIPIAAVSLLAAL
                     ASRSHAKGTVLAALDAG"
BASE COUNT          505 a          686 c          683 g          464 t
ORIGIN      
        1 tcaacaaggc catcagcgaa ttccaggcca tacaatggaa gctcgctgat atggccaccg
       61 agattgacgc ggcccggctg ctcaccatgc gcgccgccaa catgaaagac tccggaatga
      121 aaaccacgct ggaatcttcc atggccaagc tctacaccgg agaagttgcc gtgaagtgcg
      181 caaatgagtg cgtccagatc cacggcggct acggcttcat caaggattac cctgcggaga
      241 agttctaccg cgacgtcaag ctctgcacca tcggcgaagg caccagcgag attcagcgtc
      301 ttgttatcgc ccgccagttg ctgaaggact aggccgcaaa acaatggccg ataccattca
      361 atcctgggta gagcgcattc gcgcgggtga tgtccgcgcg ctcgcccgcg cgatcagcgt
      421 aatcgaagac ggccggcctg aatcgcttgc gctgttgaaa gctctgttcc accacagcgg
      481 caaagcgcag gtcatcggac tcaccggcgc tcctggcgca ggcaagagca cgctggttga
      541 tcagcttgcc cgcgagtacc gcaagcagca aaagacaatc ggcatcatcg cagttgaccc
      601 caccagccct tacactggcg gcgccattct gggtgatcgc atccgcatgc aggcgcacca
      661 tgctgatccg gggatttaca tccgcagcat ggccacccgc ggctttctcg gcgggctcgc
      721 ccgcgccacc actgacgtgg ccaccgccct cgacgccagc ggcaaagatc ttgtgctaat
      781 cgagacggtc ggagtcggcc aggatgaagt cgatatcgtc cgcctcgccg atgtgaccgt
      841 ggtgatcctg gttcccggaa tgggcgatga cgtccagacg atcaaagccg ggatcatgga
      901 aatcgccgac atttttgtaa tcaataagag tgaccgcgac ggcgccgatc gcgtggagcg
      961 cgaaatccgc gccatgcaga ctctggccat ccgcaaggac acgtggactc ctcccatcat
     1021 caaaaccgtt gccagcgagg gcaagggcat cgtcgaactg gctgcagcca ttgagcaata
     1081 cgaaaagttc ctgcgcgaga aagacctgct gctgaaaaag aaggccagca actggcgcga
     1141 gcggctgatt gacatgctgc gcgaggccct gctgcagcgg ttgttgcagg agcaattgca
     1201 ggaagcggat ctcggccgca tagctataga catcgctgag catcgccgcg atccttactc
     1261 cttggtggaa gagctggtgg gaaatatgtc tgtagcaggc aaaagttgag gccagagcgc
     1321 aagggcggca gatgcgccgg agcccattca tacaatagct agtagctagc ggctagtagc
     1381 ttcactcagt ttcgcacaac acccaggagc ttttttccat gtcctctcac accattgatc
     1441 atctcggaat cgccgttaaa tctctcgcgc aggcacgcaa attttacgag ctcctcggac
     1501 tcgagatcgc cgaagaagaa gttgtcgctc aagagaaggt gaaggtggcc atggtggaac
     1561 tcggtgagag caggatcgag ttgcttgagc ccaccagtcc ggattccgta attgcaaagt
     1621 tcctggagaa acgcggcgaa ggtcttcatc acgtcgcgtt gcatgtcccc gacctcacgc
     1681 acgcggtgga gcaactcaag gcttccggtg cgcgcctgat ctcggacgaa atcaagatcg
     1741 gcgccggcgg tcacatgtac gttttcgtac atccctccag cgcgggaggc gtgctggtgg
     1801 aattggtgca ggaagttcct tctggggttt agtgttgttt caatcccgag cccgcgcagc
     1861 gggagaggga accctattgt caaaatgagt ttccggtatg acctctcggt acaatcttct
     1921 gtgctttaac ctgagctcct ggtgtaggta gggctccctc gctacgctcg ggatgtaaaa
     1981 aaatgatcct cctcggaatt gacacatctg gcaaatctgg cggcgtcgcg ctcgccgaag
     2041 gtgacgcgca tagtttccgc gtgctgggca gcgcccctat tagcggcgga acgttctccg
     2101 ctcaattggt acccaccgtg gcagctctgc tcgaacagcg caagctcagc gtgcatgatg
     2161 tcaacgggct ctgtgtcgct tcaggtcccg gatcattcac tgggctgcgc gtcggcctga
     2221 gcgcagtcaa gggtctggca gaagtgcttc atattcccat tgctgcggtc tctcttctgg
     2281 ctgccctcgc tagccggtcc catgccaaag gcaccgtgct ggcggcgctg gatgcggg
//
LOCUS       DASQYP010000026         2574 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_234000, whole genome shotgun sequence.
ACCESSION   DASQYP010000026 DASQYP010000000
VERSION     DASQYP010000026.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 2574)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2574)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2574
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_234000"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..673
                     /locus_tag="VE783_00725"
     CDS             <1..673
                     /locus_tag="VE783_00725"
                     /inference="COORDINATES: protein motif:HMM:NF014874.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016874 - ligase activity [Evidence IEA];
                     GO_function: GO:0016881 - acid-amino acid ligase activity
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="cyanophycin synthetase"
                     /protein_id="HYX51944.1"
                     /translation="ILRSKTQCSSTRHYSHFHVEYRGRSLGDFHLQVPGQHNVLNATA
                     AVAVGLGLDIDPECIREGLENFAGVDRRFQVKGRAGGVSVIDDYGHHPTEIRATLAAA
                     KQCKFNRLHVIFQPHRYTRTRDLLNEFGTAFADADNVFVLDIYPASEEPIPGITGERV
                     AEAIRQYGGKEARYVRSFEDAARDSAAVADSGDMILTLGAGNVSQLGSQVLEQLKAKT
                     KKVPA"
     gene            complement(778..1605)
                     /locus_tag="VE783_00730"
     CDS             complement(778..1605)
                     /locus_tag="VE783_00730"
                     /inference="COORDINATES: protein motif:HMM:NF016289.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M28 family peptidase"
                     /protein_id="HYX51945.1"
                     /translation="MSSSLPAAFAQTSQVDLQPRKIIEQRLKKAPFSNSKRELALKQM
                     LTEAGCPQLAEQPVKTLSEPNIICKVPGATDRVIILGAHFDHVNVGAGVVDNWSGASL
                     LPSLLQTALKEPRHHTFIFIGFSGEERGEIGSAFYVGSLSEEQRSKISAMVNLDTLGL
                     GPTEVWASRGDPKLVNALGVVAHQLASPLSIANVEQVGSTDSEQFRIKNVPAVTIHTL
                     TSKTLSVLHTMRDQESEISWKDYYENYRLTAAYLVFLDSVLNAESQQQPAAGASVTQ"
     gene            complement(1760..>2574)
                     /locus_tag="VE783_00735"
     CDS             complement(1760..>2574)
                     /locus_tag="VE783_00735"
                     /inference="COORDINATES: protein motif:HMM:NF013100.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008658 - penicillin binding [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="penicillin-binding transpeptidase
                     domain-containing protein"
                     /protein_id="HYX51946.1"
                     /translation="SEGAQPCSTIKLSVALAALSEGLISRETPVKLGRSYSMTLTQAL
                     AHSNNAYFEAVGRQLGFPKVSYYAHQFGLGEIAGYHIEGEHLGVYPARELDAKLGGVG
                     KMCSFGESISMTPLQLGAMVAAIANGGTLYYLQHPTSPEEIVSFQPKVKRQLEIKDIL
                     PEMEDGMTGAVRYGTARSLRLNFSEEQILGKTGTCSKDGTRFGWFASYANTEVGRIVT
                     VVFLRGGRPTYGPKAAEISGRFYRALYDHNFFKQPPASAQQTEKATEIGARQ"
BASE COUNT          569 a          688 c          771 g          546 t
ORIGIN      
        1 catcttgcgc agcaagaccc agtgcagcag cacgcgccat tattctcatt ttcacgtgga
       61 gtaccggggc aggtcattgg gcgacttcca ccttcaggtt ccggggcagc acaacgtgct
      121 gaacgcgacg gctgcggtgg cagtcggtct gggactcgac attgatccag aatgcatacg
      181 tgaggggctg gagaatttcg ccggagtgga ccgccgcttc caggttaaag gccgcgccgg
      241 cggcgtaagc gtaattgacg attacgggca ccatcccacg gagatacgcg cgacacttgc
      301 cgctgcgaaa caatgcaagt tcaatcgcct gcacgtgatt tttcagccgc accggtacac
      361 gcgcacgcgc gacttgctga acgagttcgg gactgctttt gctgatgccg acaatgtatt
      421 cgtgctggat atctatcccg cgagcgaaga accgattcca gggattaccg gtgagcgggt
      481 ggccgaagca ataaggcagt atggcgggaa agaagcgcgc tacgtgcggt ccttcgaaga
      541 cgcagcgcgg gactcggcgg ctgttgccga ttcaggcgac atgatcctga cgctgggcgc
      601 cggaaacgtt tcacagcttg ggtcacaggt actggagcag ctcaaagcca agacgaagaa
      661 agtgccggct tgattcggat cgggtgaact ggtgatcgga tcagcagaac aagcatcatc
      721 caatcaaact ccttggctca ttcctgaggt ataccccagc tgaaataagg ttcgccccta
      781 ctgtgtgacg ctagcacccg cggcaggttg ctgttgagat tccgcgttca gcactgaatc
      841 cagaaaaacc agatacgccg ccgtcagccg gtaattctcg tagtaatcct tccaactgat
      901 ctcgctctcc tggtcgcgca tggtgtgcag aaccgaaagc gttttggatg tgagcgtgtg
      961 gatggtcaca gcaggaacgt tcttgattcg aaattgttcg gaatccgtgg atccgacctg
     1021 ctccacattg gcgatggaca gtggagatgc gagttggtgg gcgactacac cgagcgcatt
     1081 cacgagtttc gggtcaccgc gactggccca gacctcagtg ggaccaagac ccagagtatc
     1141 caggttgacc atggcggaaa ttttgctgcg ttgttcctcg cttaagctgc caacgtagaa
     1201 ggctgaacct atttctccgc gttcctcgcc ggaaaagccg atgaagatga aggtgtggtg
     1261 gcggggctct ttgagtgcag tttgcagcag actggggagc aacgaagcgc cactccagtt
     1321 atccaccact ccagcaccga cgttcacgtg atcaaaatgc gctcccagaa tgatcacgcg
     1381 atccgttgct ccgggaacct tacagattat gttgggttcg ctgagagttt tgaccggctg
     1441 ctcagccaac tgaggacagc ctgcttcggt aagcatctgc ttcagtgcca gttcacgttt
     1501 gctattgctg aacggcgcct tcttaagacg ttgctcaatg atcttgcggg gctggaggtc
     1561 aacctgtgac gtttgagcga aagcagcagg aagactcgac gacaaaataa acagaagaac
     1621 acgggtagcg ggatgcacgc aggagatact acatggagca ggcaggaggc ggaagcgggt
     1681 actttccctt atagccgcga gaagttcacc gcaaaactgg ccgccgcagc ggccagcagg
     1741 tagttaagct gaatgagttc tactggcgag cgccaatctc agttgctttt tcggtttgct
     1801 gtgctgaagc tggcggttgc ttgaagaagt tatggtcgta aagagcgcgg tagaaccgtc
     1861 cgctgatctc cgcggctttg gggccatatg ttggacggcc gccgcgcagg aagaccacgg
     1921 tcacgatgcg gccgacttct gtgttcgcat acgacgcgaa ccagccaaag cgggtaccgt
     1981 cttttgagca ggttcccgtc ttgcccagaa tctgctcttc actaaagttc aggcgcaggc
     2041 tacgggccgt cccataacgg accgcgcccg tcatcccatc ttccatctca ggaagaatgt
     2101 cttttatttc gagctggcgc ttcaccttgg gctggaagct aacaatctct tccggagaag
     2161 tgggatgctg caggtagtag agcgttccgc cgttggcgat ggctgcgacc atggcgccga
     2221 gttgaagtgg cgtcatggag atgctttcac cgaaagagca catcttgcct acgccgccaa
     2281 gcttggcgtc gagttcgcgc gccgggtaga cgccgagatg ttcgccttca atgtggtagc
     2341 cggcaatttc gcccaggcca aactgatggg cgtaataact gactttgggg aaaccaagct
     2401 ggcggccgac agcttcgaag taggcattgt tagagtgcgc caacgcctgc gtaagcgtca
     2461 tggaatatga acgcccgagc ttgaccggcg tttcgcggga aatcagccct tcactcaagg
     2521 cggccagcgc gaccgagagc ttgatagtgg aacagggctg ggccccttca gaga
//
LOCUS       DASQYP010000027         7930 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_171313, whole genome shotgun sequence.
ACCESSION   DASQYP010000027 DASQYP010000000
VERSION     DASQYP010000027.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 7930)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7930)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7930
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_171313"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..256
                     /locus_tag="VE783_00740"
     CDS             <1..256
                     /locus_tag="VE783_00740"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX51947.1"
                     /translation="SLDGGNFSSHGWILASSTPAGAHGILSQTNPAHWVLYTYPFGQG
                     TVIYSTIPLDFYLDGSGSPTVNTNMQNYAANVVAYGNSLR"
     gene            290..619
                     /locus_tag="VE783_00745"
     CDS             290..619
                     /locus_tag="VE783_00745"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX51948.1"
                     /translation="MKRWLFAAILATFVVAGWTQAPATGTANGSVTLNGVPLVGAAVV
                     IASSGDSSFTVKVTTDASGNFSAASVPLGNVVAKAFDVQGNFLSSVTGTLTRAGDVVT
                     LPIAATR"
     gene            726..2297
                     /locus_tag="VE783_00750"
     CDS             726..2297
                     /locus_tag="VE783_00750"
                     /inference="COORDINATES: protein motif:HMM:NF018269.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="di-heme oxidoredictase family protein"
                     /protein_id="HYX51949.1"
                     /translation="MTLTPAQAPSQARSKIGTEVSIPRHLQDDEEFSISTKELVEYGK
                     KVFMANWTDQEGGGRPQTKGNGTALTDPAHPLVGTRAWNRVSGPDANSCYGCHNMPYG
                     IPGGGGDFVTSVFVLAQRFDFATLDKADALPEKGAFDEEGNPVTLQNIGDLRATTGMF
                     GAGYLEMLARQMTAELQATRDSLRLGETKPLVAKGISFGQLTRRKDGSWDTSKVEGLP
                     RASIVAPTPVDRPNLIIRPWHQASNVVSLREFSNTAFNQHHGMQSSERFGLGNDPDGD
                     GFSNELTRADITAVTIYQAVMAVPGRVIPNDPEVEQAVFNGEKVFEKIGCSSCHVSKL
                     PLNNQGWIFTEPGPYNPPMNLRSGTTKTLKVDLNSHDLPLPRLSPDPKSPDVVWVPAF
                     TDFKLHDICDPSDAGEPLDQNQTPWTKKFRQGNRRFLTKRLWGAANEPPFFHHGLFTT
                     LRRAVLAHSGEALESRMRFQELPAYDQDSVIEFLKSLQVLPPGTEALVVDENFKAKSW
                     PPKPVAASATVTRGH"
     gene            2407..2745
                     /locus_tag="VE783_00755"
     CDS             2407..2745
                     /locus_tag="VE783_00755"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX51950.1"
                     /translation="MLIVFGSGAVAISGRNPGAGVAASAVLKLACLIAAVRIAALWIG
                     LAGIQRGDWLQIPAQFLLMLGWPDIYLARAARAQPVRWALICTLILAGTSFIWSMVLL
                     WFANRIARKA"
     gene            complement(2801..2887)
                     /locus_tag="VE783_00760"
     tRNA            complement(2801..2887)
                     /locus_tag="VE783_00760"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(2851..2853),aa:Leu,seq:cag)
     gene            complement(3134..4969)
                     /locus_tag="VE783_00765"
     CDS             complement(3134..4969)
                     /locus_tag="VE783_00765"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX51951.1"
                     /translation="MKTETAVTLARPSVTVLATPRTDLDPIMAGIPWGESFRNGAGLN
                     AVTGNLTGSALQPFEPVQRGGKTSVMHYEFVSNQSEYEREISASTSGKYNIEGIDVSA
                     SASYLTKIKYSETSVTLIAKYRSEFAEYALADKYNLTTEAARLMESDPAKFRAAFGDY
                     FLAGAKSGSWFTATYVCSSSDASNMQEFKASFALDAPKVFSAEGAASFKEKAEKLNIS
                     VAYDVFAYGHTGTLPPKPKTPDEVIAVLDWFQQHESPVAVRGYLEHYSVLNPLYPSWI
                     DVDPAAFVELQVLYNAYWRLIDRYESCPPAYRAQLQTQFIQVTSDVRANRSRLVDDAE
                     KRKQCARDVTLLLQVFDAVFDRQDFYYAVQKSAKKEPGRDQRIDETGGVQSWLYGFST
                     YSKSSAVLIQSVVQRYSDSWHIGWRETTLQFGPDQTKLLVGWQVISNWNDGTNGGWWK
                     TTDQIILQNQGGVHVKSLYDRGCDWTVVYYFVESKDYLFGDRATLAPTPEQASGMPAI
                     PNTVVNIPPDGRIYNLGLVPGNLHVYDTNMPPAAQTQYELTIVNVNYWNAVIQPGHTD
                     TYPANNNASYIRNIGPSRLQVLYFPLEMNQEAGEGGMKALAEKKK"
     gene            complement(5294..5758)
                     /locus_tag="VE783_00770"
     CDS             complement(5294..5758)
                     /locus_tag="VE783_00770"
                     /inference="COORDINATES: protein motif:HMM:NF013625.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042834 - peptidoglycan binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan-binding domain-containing protein"
                     /protein_id="HYX51952.1"
                     /translation="MTLRLKNLVLLSTVLALSASLSFATTPTTKHTGKSTHASAKHRK
                     VAKKGSWKKKGQQGIQPERAREIQAALIKQNYLTGEPTGEWDSRSQAAMVRFQSDNGW
                     QTKVVPDSRALIKLGLGPIYTADMLVNPDAANTVAASGGSAPASGIASRDKQ"
     gene            complement(6033..7619)
                     /locus_tag="VE783_00775"
     CDS             complement(6033..7619)
                     /locus_tag="VE783_00775"
                     /EC_number="3.4.21.107"
                     /inference="COORDINATES: protein motif:HMM:TIGR02037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA];
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA];
                     GO_process: GO:0006950 - response to stress [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Do family serine endopeptidase"
                     /protein_id="HYX51953.1"
                     /translation="MNSRFADFLARVRAQRVFSMLVVLVTLAVGILIGTVLSRNGVKG
                     NFSTTDAALLPMQTPQQLSSTFNDVNKRVGGAVVNISTESNPRPRQRTNPHRRQTPGQ
                     GQGDQGGGQGPGGGGDDDSPNPFGGPGGRSKSLGSGVILNQNGYIITNYHVVDGADRI
                     RVKLKDDPTGVLHDAKMIGYDKETDLAVIKIDPPKDAQLTIAKLGDSDTMNVGDWVLA
                     MGSPFGLENTVTAGIVSARGRNINPARQFQSFIQTDAAINPGNSGGPLVNMRGEVIGI
                     NTAIYTQSFGYQGVGFAMPSNTVREVYDQLTSNDHRVARGSIGVTFNQQTPAMLRMYG
                     VKQGVTISSVTDSGPAQKAGLQAEDTITAVNGHPVKSGDDLVATISSIKPGTKVPVAF
                     VRNGQQKDASVVVGDRAKLFADRTGDTTDSSNEESQPAPTKLGMTVKAVSPEAAERFG
                     IPEGTGVQVTDVRPDSFAEDIGVQPGMIILKVNKQTVNSEADFRKATAQLKSGQDIVF
                     LVKSGRGASGGNIFLSGTLP"
     gene            complement(7748..>7930)
                     /locus_tag="VE783_00780"
     CDS             complement(7748..>7930)
                     /locus_tag="VE783_00780"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX51954.1"
                     /translation="LEPVFAWLTSYIVLHERLGMRSGGGALLILAGVLISELLGGVAH
                     PEAELAAEAGEPSSAG"
BASE COUNT         1683 a         2181 c         2326 g         1740 t
ORIGIN      
        1 ctcgcttgac ggcggcaact tctccagcca cggatggatt ctggccagca gcaccccggc
       61 gggtgcacac ggcatcctga gccagaccaa ccctgctcac tgggtcctgt acacatatcc
      121 gttcgggcag ggaaccgtaa tttattcgac tattccgctt gatttttacc tggatggttc
      181 cggtagtccg acggttaaca cgaacatgca gaactatgcc gcgaatgtgg tggcttatgg
      241 aaacagcttg cgctagggag aagcgagcgc tcatttggga ggtgggctga tgaagaggtg
      301 gctttttgca gcgattctgg caacatttgt ggtggccggc tggactcagg cgccggccac
      361 gggcaccgca aatggctcgg tgacgctcaa cggcgtgccg ctggttgggg ccgcagttgt
      421 tattgcaagt tccggtgatt cgagcttcac ggtaaaggtc accactgacg caagcggaaa
      481 tttcagcgct gccagcgtgc cccttggcaa cgtggtggcg aaagcttttg atgtgcaagg
      541 caatttcctt agcagcgtta ccggcactct cacccgagca ggcgatgtgg ttacgcttcc
      601 gatcgcggca acaagatgag caggctttca gcgttggcgg cacgagggat tgattgaggt
      661 ggtcttctgc catgaggctc ttgatatcgg ggatttgcag ctgtctgatc ataacctgcg
      721 tgtacgtgac gctcacaccg gcgcaggcgc cgtctcaagc gagatcaaag atcggcactg
      781 aggtttccat tcctcgccac cttcaggacg atgaggagtt ttccatctcg accaaggaat
      841 tagtcgagta cgggaaaaaa gtcttcatgg caaactggac cgaccaggaa ggcggcgggc
      901 ggccacagac gaagggcaac ggcacagcgc tcacggatcc tgctcatcct ttggtgggga
      961 cacgggcatg gaaccgggtt tcgggccctg atgccaactc ctgctacgga tgccacaaca
     1021 tgccttatgg aattcccggt ggcggaggtg actttgttac cagcgttttt gttctggcgc
     1081 agaggtttga ttttgccacc ctggacaaag cagacgcgct gccggagaaa ggcgccttcg
     1141 acgaagaagg caatccggtc acactgcaaa acattggcga tctgagagcg actacaggga
     1201 tgttcggcgc ggggtatctt gagatgctgg cgcgccagat gacggcggag ttgcaggcaa
     1261 cgcgcgactc tttacggctt ggcgaaacca aaccgctggt ggccaaagga atatccttcg
     1321 gacagctcac gagaagaaaa gatggatcgt gggacaccag caaggtagaa ggcctgcccc
     1381 gtgcgagcat tgtggcaccc accccagtgg accgtcccaa cctgattatc cggccatggc
     1441 accaggcaag caatgtggtg tcactgcggg aattcagcaa cacggccttc aaccagcatc
     1501 atgggatgca gtccagcgag cgctttggcc tgggaaatga tcccgatggc gacgggttca
     1561 gcaacgaact tacacgcgcg gatattacgg cggtcaccat ctatcaggcg gtgatggcag
     1621 ttcccggccg ggtgatcccg aacgatcccg aagttgaaca ggcagtattc aatggagaga
     1681 aggtttttga aaagatcggg tgctcttcct gtcatgtttc gaagctgcct ttgaacaacc
     1741 agggatggat cttcaccgag ccgggtccat acaatccacc catgaatctc cgttccggca
     1801 ccaccaagac ccttaaggta gatctaaaca gccatgactt gccgctgccc aggctgtcgc
     1861 ccgatccaaa aagcccggac gtggtatggg ttcctgcatt tacggatttc aagctgcacg
     1921 atatctgcga ccccagtgac gcaggcgagc cgctcgacca gaaccagacg ccatggacaa
     1981 aaaaattccg gcagggcaac cgtcgatttt tgacgaagcg cctatgggga gcagccaatg
     2041 agccgccgtt cttccatcat gggttattca ccacgcttcg gcgagctgtg cttgcgcatt
     2101 ccggcgaggc cctggaatct cgaatgcggt tccaggagct gccggcgtac gaccaggact
     2161 cagtgattga attcctcaag tcactgcagg tgttaccgcc gggaacggaa gcgctcgtgg
     2221 tggacgaaaa cttcaaggct aaatcctggc ctccgaagcc ggttgcggca agcgcaaccg
     2281 ttactcgagg acactgatcg aaggttcggc gggagaaaga tgccggcact ttcagctgtt
     2341 cacgccgcgc ggtcatgggc ttagactgat tcaagcacca acatggtaat cgctaccttt
     2401 ttgctcatgc tgatcgtgtt cggttcaggc gcggttgcaa tctcgggccg gaatcctggc
     2461 gccggcgttg ctgcgtctgc agttctaaaa cttgcatgcc tgattgccgc agtgagaatc
     2521 gcagccctct ggatagggct tgcaggcatt cagcggggtg actggctgca aatccccgcg
     2581 caatttctgt tgatgctggg ctggccggat atctatctcg caagggctgc ccgcgcccag
     2641 cctgtccgat gggcattgat atgcaccctg atccttgcag gcacgagctt tatctggtcg
     2701 atggttcttc tctggttcgc aaacaggatt gcaagaaagg cgtgatgagc aggacggagg
     2761 gccgcttgag cgggttggcg cgccagcgac agaataaata tggtgccgaa gaagggactc
     2821 gaacccccac acccttgcgg gtacatggac ctgaaccatg cgcgtctgcc aattccgcca
     2881 cttcggcaag gagaagcgcc agaggaatac accggcgcgg cgacgagaaa caacacttct
     2941 attttaacgt gaatagcgga agagtcaaac cgcgtgtttc ccagccaacg cagcgcagtg
     3001 cttttggcat gtgcgattgc caaacgcaaa atcccactcg ggaagctttg ttgcacgaag
     3061 aacggtgaca aaaggcctcg cggaaaacag catccgcgag gccgtattgc atccgctcca
     3121 gcaggagcaa aagctatttc tttttttccg ccagcgcctt cattccgcct tccccggcct
     3181 cctggttcat ctccaacggg aaatagagga cctgcaaccg gctcgggccg atattgcgga
     3241 tataagacgc attgttgttg gcgggatatg tgtcagtatg tcccggctga atcacagcgt
     3301 tccagtaatt cacattcaca atggtgagtt catattgcgt ctgggctgct ggaggcatgt
     3361 tggtgtcgta aacatggaga ttgcccggga ccaggccaag gttgtaaatt cgcccgtccg
     3421 gcgggatgtt cacaactgtg tttggaatgg cgggcatacc cgacgcttgc tcgggtgttg
     3481 gggccagcgt tgcgcggtcg ccgaagaggt aatccttcga ttccacgaag taataaacta
     3541 ccgtccagtc acagccgcga tcgtagagcg acttcacgtg cacgccgccc tggttctgga
     3601 gaatgatctg gtccgtcgtc ttccaccagc cgccgttggt gccgtcattc cagttggaga
     3661 tgacctgcca ccccaccagt aacttggtct gatcgggccc gaattgcagc gttgtttccc
     3721 gccagccgat gtgccatgaa tcgctatagc gttgcacaac ggactggatc agcacagcgc
     3781 tgctcttgct gtaggtggag aagccgtaaa gccaggattg cactcctccg gtttcatcga
     3841 tccgctggtc cctgccgggt tccttcttgg ccgacttctg cacggcgtaa tagaagtcct
     3901 gccggtcaaa aacagcgtca aagacctgca acagcagggt gacgtcacgg gcgcactgct
     3961 tccgcttctc cgcgtcgtcc accagacgtg aacggttggc ccgaacgtct gacgtgacct
     4021 ggatgaattg cgtctgcaac tgtgcgcggt aggccggcgg gcacgactcg taccggtcga
     4081 tcagccgcca gtacgcgtta taaagcacct gcaattccac gaacgccgcc ggatccacat
     4141 cgatccacga tgggtagagc gggttgagaa ctgagtagtg ttcgagatat ccgcggacgg
     4201 cgaccggtga ttcatgctgc tggaaccagt ccagtaccgc gatcacttcg tcgggcgtct
     4261 tcggtttggg aggaagtgtc ccggtgtggc cataggcgaa aacgtcatag gctaccgaga
     4321 tgttgagctt ctccgctttc tccttgaatg aggctgcgcc ttcggcggaa aacaccttgg
     4381 gagcatccag ggcgaatgac gccttgaatt cctgcatgtt gcttgcgtcg ctggaactgc
     4441 agacgtaagt cgcggtaaac caggaaccgc tctttgcccc ggccaggaaa tagtcgccga
     4501 aagcagcgcg gaatttggca ggatcactct ccatgagcct ggcggcttcc gtggtgaggt
     4561 tgtatttatc tgcgagcgcg tattcggcaa actcagagcg atacttcgca ataagcgtta
     4621 cggaggtttc agagtatttt atttttgtca ggtatgaggc cgaggcactg acgtcaatgc
     4681 cttcaatgtt gtacttcccc gaggttgaag cggaaatttc ccgctcatac tcggactggt
     4741 tggaaacaaa ctcatagtgc attacagagg tttttccgcc tcgttgcact ggctcaaatg
     4801 gctgcagagc cgatccagtt aaatttcccg taacggcgtt gagtccagcg ccatttcgga
     4861 agctttcgcc ccagggaatt ccggccatga tgggatcaag atccgtacgc ggcgtggcga
     4921 gtaccgttac agaaggccga gcaagagtga ctgctgtttc cgttttcatt tttcctcctt
     4981 gtttgtgttt tggttctctt gtgggggctc ggcggtttgt aattcgattc ttacagattc
     5041 tcagccacgt ttggggcgct tctagggtct ctaaggtttg aaagatttcc caaaatgaaa
     5101 ctagcggctg ggaatgcggg atgtaacaga gcaggaagag gatcgaacga cgccgcgatt
     5161 tgtcagctac aggcgtcagc gaggggatgc aaaatggcgg gcagcctcaa tggttcgcgc
     5221 ttggctcgag taaacagaac aaaccactgc tggcgagttc acacccacca gtttttcagg
     5281 ctttgactaa gcgttactgc ttgtcgcgac tggcgatgcc ggatgccgga gcggagccac
     5341 cgctggcggc cacggtattg gcggcatcgg gattcacgag catgtcagcc gtgtaaatcg
     5401 gccccaagcc tagcttgatg agggcgcggg aatccggaac cactttggtc tgccagccgt
     5461 tatccgactg aaagcgaacc atggctgcct ggctgcgcga gtcccattcg ccggtgggct
     5521 ctccggtaag gtaattttgt ttgatcaatg cggcctggat ttcgcgggcg cgctccggct
     5581 ggatcccctg ctggcccttc ttcttccacg agcccttctt cgcaaccttg cggtgcttgg
     5641 ccgaggcatg cgtactcttg ccggtatgtt tcgtggtggg ggtggtggcg aaactcaggc
     5701 tggcagagag ggccagaacc gtgctgagca gaaccaggtt tttaagtctc agcgtcaatg
     5761 gaaacctcag agagttcaaa tatgatcgca gatttgatgc gattccgcta cacagaagtt
     5821 acccggccag gattaccaaa gttatggtga aacaaatgta agtagctgaa tctaaatcga
     5881 ttgccaaaat tgccaaaatc gccgggctta ataaaaaagc atgggaataa gcgaaatttg
     5941 cactgcccgg tgagaattgg cgaaaacgtt gtgcgcgaaa tgacgcggag cgccagcttg
     6001 aggccggtgc cccgcgattc tcttttagcc gcttacggca aggttccaga caggaagatg
     6061 ttcccgcccg aagcgccgcg gccgctcttg accaggaaaa ctatgtcctg gccgctcttc
     6121 aattgcgcgg tcgccttgcg gaagtcggcc tcgctgttta cggtttgctt gttgaccttc
     6181 aggatgatca tgccgggctg aacgccgatg tcctcggcga atgaatccgg acgaacatca
     6241 gtgacctgaa cgcctgtgcc ttcgggaatg ccgaaccgct cagcggcctc cggcgaaaca
     6301 gccttgaccg tcatacccag tttggtggga gcaggctggc tttcttcgtt ggagctgtcc
     6361 gtagtgtcgc ccgtacgatc ggcaaatagc ttggcccgat cgccaaccac cacggaggcg
     6421 tccttctgct gtccgttgcg cacgaacgca acgggaacct tggttccggg cttgatagag
     6481 gaaatggtgg ctaccagatc gtccccgctt ttgacaggat ggccattcac agcggtaatg
     6541 gtgtcttccg cctgcaaccc ggctttttgc gccggaccac tgtcagtgac gctggaaatg
     6601 gtcactccct gcttcacgcc atacatgcga agcatggccg gagtctgctg gttgaaggtg
     6661 acgccgatgg atccgcgggc cacgcgatgg tcattgctgg tgagttggtc gtaaacttcg
     6721 cgcaccgtgt ttgacggcat ggcgaagccc acgccctggt aaccgaatga ctgggtgtag
     6781 atggcggtgt tgatgccgat gacttcaccc cgcatgttca ccaacgggcc tcccgagttg
     6841 ccgggattga tggcggcatc agtctgaata aacgactgga actgccgcgc cgggttgatg
     6901 ttgcgtccac gcgcagagac gatgcccgcc gtgacggtgt tttccaggcc aaaggggctt
     6961 cccatggcca acacccagtc acccacgttc atggtgtcag agtcgcctag tttggcgatg
     7021 gtaagctggg cgtctttagg tggatcaatt ttaatgacgg ccagatccgt ttccttgtcg
     7081 tagccgatca tcttggcatc gtgcaggacg ccggtcgggt cgtctttcag cttcacgcga
     7141 atacggtccg ccccatccac tacgtgatag ttggtgatga tgtagccgtt ctggttcagg
     7201 atcacgcctg aacccaggga tttggagcgg cctcccggac cgccaaacgg gttgggcgaa
     7261 tcatcatcgc cgccaccgcc gggtccctgc ccgccgccct gatcgccctg accctgtccg
     7321 ggagtttgcc gccggtgcgg gttggtacgc tggcgcggac gcggattcga ttccgtgctg
     7381 atgttaacca cagctccgcc cacacgcttg tttacgtcgt taaaggtaga gctgagctgc
     7441 tgcggggtct gcatgggaag cagcgcggca tctgtggtgg agaagttgcc ttttacgccg
     7501 ttccggctga gcacggtgcc aatcaggatg cccaccgcca gcgtgaccag cacaaccagc
     7561 atggaaaaaa ctctttgcgc cctgactctt gccagaaaat cggcaaaacg cgaattcata
     7621 gaaatgggac cttcctcttt taggacgatt gcgcctgtgg aaattataaa tctgcacgcc
     7681 tcagcagggc cacttacccg attggatgag agtgcattcc ctttagacgc aaaacagaaa
     7741 agctatgtta tccagcagaa ctgggttccc cggcttctgc cgccagttca gcctccggat
     7801 gggccacacc cccgagcagt tccgaaatca gaacgccggc caggatcaat aatgcgccac
     7861 ccccggagcg catccccagc cgttcatgaa gcacgatgta agaggtgagc caggcaaaga
     7921 ccggctcaag
//
LOCUS       DASQYP010000028        11763 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_213507, whole genome shotgun sequence.
ACCESSION   DASQYP010000028 DASQYP010000000
VERSION     DASQYP010000028.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 11763)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11763)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11763
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_213507"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..728
                     /locus_tag="VE783_00785"
     CDS             <1..728
                     /locus_tag="VE783_00785"
                     /inference="COORDINATES: protein motif:HMM:NF014717.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HYX51955.1"
                     /translation="VVNQQFAMRFWPNQDPLGHTVRLDRSDGNEYEIVGLVEDGKYSD
                     IQEDPKPCFFIPLKPYDYGEISMAIKTSATASSLAAPVRQALRSVDQDVAILNVVTLR
                     EHMGLALYDQRVKSRLITTLGALGLALAGIGLYGLMAFLVSRRTQEIGVRLALGSSRA
                     AIFRLTLAQALRLGAFGIVIGLAAAIPATRLLRSMLVGVAPGDLAVFLSGIGILLFAA
                     LVASLAPARSAVKVDPLKALRSE"
     gene            complement(740..2497)
                     /locus_tag="VE783_00790"
     CDS             complement(740..2497)
                     /locus_tag="VE783_00790"
                     /inference="COORDINATES: protein motif:HMM:NF012234.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HYX51956.1"
                     /translation="MSSASPSTEKYLDALPEWARELSEKYYSRSYALFVLYGNVRDVI
                     PLRQPSGTTFLSLEQFLSGALFGQRDLVLHYDRGGMAFGNADTQADFRRALEGYDSFH
                     GTSFARSGLPRNPDAVLNILDNYLRLRIADGRKIALVLDFAETIAPAGDVSNMSAEDR
                     NALVILKRWARNPDFLNADVTICLISESQTELNQGIVQNPGVASIQIPLPEEDERLEY
                     VQVLLREQPLPAGSEVSDTVLAKLGAGLKRMQIQSLIAHAVQNRQPLTLKFLTERKKD
                     LIESESAGLLEFVQSRFDLSYVAGNDQAKKKLQDAAAAIASGNTDVLPMGYVICGPVG
                     TGKTFITTCFAGQVGIPAVTLKNFRSMWQGQTEGNLERVLNLLKAMSPIAVIVDEADA
                     QLGDRSSSGDSGVSNRVFAQIAQFMGNTDYRGKVIWFLLTCRPDLLPVDLKRQGRAEE
                     HIALFYPDTPQERLALLRAMQKKAHMPAFSDDMERFFLDHAANLSGADIEAVLVRSRM
                     HAALRGKSSVENEDIKATLEDFIPPSYPTEVELQNVVAVLECTSKCLLPEKYREADRG
                     ELIQRANALLMMSRQSGES"
     gene            complement(2522..3427)
                     /locus_tag="VE783_00795"
     CDS             complement(2522..3427)
                     /locus_tag="VE783_00795"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX51957.1"
                     /translation="MGFLGLGQPGGADPSSPGGPQKDINFVKEAFKIQYNWITLAGMG
                     VFAVVTGSALPIVLAGGLELMYLAAVSTNSRFQRLVRSWKFAEEQEAKERSLSDLLRT
                     LPSEMQNRYIALAQVCGSIRNNFAQLSSTSQIYVQQMDQRLQGLLHAYARLLMAAWQQ
                     RQYLKTSDSDTIKREIAALQQRMSQDPPKVQDINKKRIEILSKRLEKFQKIVENRQVV
                     DAQCAAVEDVLQLVRDQSVTMRDPQQVSDQLANLVHDVEQTEQTVQQVEAIFSSLTPD
                     MEGIMQGVDTDTTSTSAAQRTRIGS"
     gene            complement(3427..4257)
                     /locus_tag="VE783_00800"
     CDS             complement(3427..4257)
                     /locus_tag="VE783_00800"
                     /EC_number="7.6.2.7"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HYX51958.1"
                     /translation="METKKAKIAIHNVSRIFYSPRGERIEAIKDVSLEVEDAFSPAGR
                     DIGEFRVLLGPSGCGKSTLLRMIAGLDHPTTGEIMVNGAAVTAPGKDRGMVFQKYTSF
                     PWLTVRQNVEYGMKINGVPAAQRKETADHLLQQVGLAEFADVYPDTLSGGMQQRVAIA
                     RTLALRPSVILMDEPFGALDAQTRSDMQQLLLKIWDETACTILFVTHDVEEAVYLADR
                     IFIMSSHPGTIVEDVQVPFDRPRDLELKEKNEFHELQHYVLGRLKSAPGVGGHVRVSI
                     "
     gene            complement(4247..5101)
                     /locus_tag="VE783_00805"
     CDS             complement(4247..5101)
                     /locus_tag="VE783_00805"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HYX51959.1"
                     /translation="MADLFTIRKETSPATKLTLAVLSWVFVVTAWALITHWDWISSYV
                     FPTPIEVVRAFPSLFSERGLLGNVYMSWLRIAHAFLWCVVVAIPLGLVMASFRWVYDF
                     VNPIAAPMRSMPITAFLPAFIGIFGIYETMKVAFLWFGMFFYLLAVVVEEVNRVDTSL
                     LETAYTLGAKKYQVLWLMFRASFPGIFSSFRILYDIGWTYVILAEIVNRSRGVGAMVQ
                     SAYEFHRPDLVYAGIIAIGVAAFLFRALLTFLEKILFPWRQAGQSSAAMSEAVAGAKR
                     TKAVSSGN"
     gene            complement(5165..6736)
                     /locus_tag="VE783_00810"
     CDS             complement(5165..6736)
                     /locus_tag="VE783_00810"
                     /inference="COORDINATES: protein motif:HMM:NF020650.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter substrate-binding/OmpA
                     family protein"
                     /protein_id="HYX51960.1"
                     /translation="MAVKIEKGGWALIFLIGLALVGYSLYKYGWLDLGSLTGKGSSSG
                     SSTGRVDTSKPLELPVSASDDNAEVRVRVNVWVGCVGGLVANGGLDTAPDSIFAKKGL
                     KVSFKIIDDWTEGASALATNNVDVMLTTLDVYAKDYGQFQEKGFGSHAFLMVDWSRGA
                     DGVIGKQGINSIEDLAGKTVAFAPYTPSHFLLWNGLKASGLSTEQRNEIFKNAVHTKD
                     GIEPAVLFAQEKVDAAVAWDPDMSDAVGKRAGAKKIYDTRVANRLIADILVVSDRFAA
                     KHPQTLLKFSQGWLEGVEFIKNQPDRAYNMIGTIKDFNIPSDLAKTMLGGVKLADYAD
                     NLSFLGTKGANSDYANIFGMAQDMYRELRMIKRTSNPEDSVDRRYVQQLNNAGFSTAS
                     TEAPIEYKPVAKTATPLATQHRSIYFDPNSAHMSLDSRAVVDEIGGQMRAYENTVVDI
                     EGNTDSTGARGYNMQLSRQRAEAVREYLMDKYGFPGARFRIAGNGPDRPLETNATPEG
                     REKNRRTDIKLYANQ"
     gene            complement(6815..7555)
                     /locus_tag="VE783_00815"
     CDS             complement(6815..7555)
                     /locus_tag="VE783_00815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013942144.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PspA/IM30 family protein"
                     /protein_id="HYX51961.1"
                     /translation="MWQRFTRMIRSFVGFFISVAEDPELILQQNIRDMNDQVPRMNES
                     IAMVKANVTLLEREEAKYQADIANLTAKVKAAIQANRDDIAGSFAAQLEQTKAALART
                     QGQLTTARTAFDKAMAVKKAFMDEKERKTQEALSAIADYRRAQWQKKVADVMEQFNVA
                     GISQTHDEMVRKIEEMTAVNEARMDMAMGNVDQQKIKIEEEAQKMQASELVKQFKIEM
                     GLAAPAAAGAASGGAVEKTIGGKEPQKS"
     gene            complement(7572..8300)
                     /locus_tag="VE783_00820"
     CDS             complement(7572..8300)
                     /locus_tag="VE783_00820"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX51962.1"
                     /translation="MTKKWYNYFVSVEDPSGMATPGTPEAGQPAASAGSAAQTVAEIA
                     SGIAMAEPKFTAPVSKEASFDDIYKAAEIPDAPKGYSIFKVAEMLQSEHIRSMPAEVK
                     RSSVLVALDAAGVDIKDIIQDAVRRDRALDTFERVQEKAITELEASKNQENAQIQAEI
                     DKFVSEQRAKMQANNDEVTREKERFFGWRLKKQQEEKKISDAVAPFVSENPITTGGLS
                     SAASATQPGAQSKDPAGRKSGQQS"
     gene            8642..9103
                     /locus_tag="VE783_00825"
     CDS             8642..9103
                     /locus_tag="VE783_00825"
                     /inference="COORDINATES: protein motif:HMM:NF018587.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phage regulatory CII family protein"
                     /protein_id="HYX51963.1"
                     /translation="MPAKTLPAVLSQVVESKAEYDLRLLAQQLGTNYRSLMYWLRGDR
                     HIPAYLLPRICLLVKNYEALDLLESQAGRVAFKIPDPKRTTEEQFKAISALIKDVGEA
                     LESIGSTLADGEVEERELVVTIPKLEAVIQECASLKYLLEELYKHKKKKTK"
     gene            complement(9176..10213)
                     /locus_tag="VE783_00830"
     CDS             complement(9176..10213)
                     /locus_tag="VE783_00830"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX51964.1"
                     /translation="MRRAITLVLASAFLFSNSFAFADVQYTEESKITGGAATGAMKMA
                     GIFSKDARQAMQGSTTTVSVKGNKMRHESSLGTAQIFDLDGRRVIDIDMKHKTYSVMT
                     FEQMKEQVAEAKRKAAEEQAKRSGKKGEDTKVTIKPKISIEPGAGSKEILNYNAKETK
                     IRVDMEMEAQDSKGNNQSGNTWVNSDNYVAPVKGYDEVKRFYAKMAKELDWVPGAMMQ
                     NNANLQINQPMVEYNKNLEKLNGMPLLSYVSVGMGPNPGTTGQNAAPTPEKKEGNAIT
                     KGLGGMMGGFGKHKQKDSSDDDSAKAASAQGGSLMDMTTTVTSFSNSAVDAGLFEIPA
                     GFKQVEKKEQK"
     gene            complement(10310..10537)
                     /locus_tag="VE783_00835"
     CDS             complement(10310..10537)
                     /locus_tag="VE783_00835"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX51965.1"
                     /translation="MRVAKIRPPIQVQFETGDLAEISAIYRSAHAACAPNRCWLQAGE
                     RFPVCGDCGANATYILVQPIQHISEDPDFKG"
     gene            10791..11621
                     /locus_tag="VE783_00840"
     CDS             10791..11621
                     /locus_tag="VE783_00840"
                     /inference="COORDINATES: protein motif:HMM:NF013250.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0016780 - phosphotransferase activity, for
                     other substituted phosphate groups [Evidence IEA];
                     GO_process: GO:0008654 - phospholipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-alcohol phosphatidyltransferase family
                     protein"
                     /protein_id="HYX51966.1"
                     /translation="MIKTTTLALLLLKYFRNFNFVAPLRTAIGMREAKEIDAFGADCS
                     ARESASQSGMSSVAVMAFWAAVSGVMVRTRLLAGRALERWKPRLPALLVCFRAALGPL
                     IIALAAFSPTRFLLVACIGLASLTDVLDGMLARRWGVATENLRRWDTRADTFFYLCVA
                     ICILLRSPQSIESRMVLVAGLATAEVIQHVIAAAKYGRHASYHSCISKLWGLLMAAAT
                     VALLGFSVDNWFLDITIAWGILCNVQGLVMTLMLPTWNRDVPTLWHAWKLRRALACAP
                     "
BASE COUNT         2252 a         3540 c         3279 g         2692 t
ORIGIN      
        1 tggtggtgaa ccagcagttc gcaatgcgct tctggcccaa tcaggacccg ctcggacaca
       61 ccgttcggct agaccgttca gacggcaatg aatacgaaat tgtaggcctg gtggaagacg
      121 gcaaatacag cgacatccag gaagacccga aaccatgctt cttcattcca ttgaagccat
      181 acgattacgg cgagatctct atggcaatca agacctccgc aacggcttcg tcgctggctg
      241 ctccagtgcg acaggcattg cgctccgttg atcaggatgt ggcgatcctc aatgtagtca
      301 cgctacgcga acacatggga ctcgcacttt atgaccagcg ggtgaaatcg cgcctgatca
      361 ccacactcgg agcactcggt ctcgctctgg cagggatcgg gctgtatgga ttgatggcat
      421 ttctggtgag ccgccgaaca caggagatcg gcgttcgact ggcgctgggg tcgtcgcggg
      481 ctgcgatctt ccgcctcacg ctcgcgcaag ccttgcgcct tggagcattc ggcattgtga
      541 ttgggttggc agcggcgatt cccgcaaccc gtttgctgcg aagcatgctg gttggtgttg
      601 cgcctggcga tctcgcagtc ttcctgagcg gaatcggcat cttgctgttc gcagcgctcg
      661 ttgcgtcttt ggcgcctgcg agaagcgcag tcaaggttga tcccttgaag gcgctgcgct
      721 cggagtagat tccgcagcct tagctttctc cggattgccg gctcatcatc agcaatgcat
      781 tggcgcgctg gatcagttct ccgcgatcgg cctcgcgata tttttccggc agcaggcact
      841 tgctcgtaca ttccaggacc gcgactacat tctgcaactc aacttccgtg ggataactcg
      901 gcggaataaa gtcttccagc gtcgctttaa tatcttcatt ttccacgctg ctcttgccac
      961 gcagtgcggc atgcattcgg ctgcgcacca gaacggcctc aatatccgca ccggagaggt
     1021 tcgccgcgtg atccagaaaa aatctttcca tatcgtctga gaacgccggc atgtgcgcct
     1081 tcttctgcat cgcgcgcaac agagcaagcc gttcctgcgg cgtatccgga tagaacagcg
     1141 caatgtgttc ttccgcgcgc ccctgtcgtt tgaggtcgac cggcagcagg tccggacggc
     1201 aggtgagcag gaaccagatc accttgccgc gatagtcggt gttgcccatg aactgcgcga
     1261 tctgggcaaa aacgcggttg ctcacgccgc tgtcgcccga gctggagcgg tcgccaagct
     1321 gcgcgtcggc ttcgtccaca atcacggcga tcgggctcat ggctttaagc aaattcaaca
     1381 cgcgctccag attgccttcc gtctgaccct gccacatgct gcggaagttc ttgagcgtca
     1441 cggctggtat gccaacctgc ccggcaaagc aggtggtgat gaacgttttg cccgtgccca
     1501 ccggcccgca gatcacgtaa cccatcggca gcacgtcagt gttgcccgaa gcgatcgcgg
     1561 ctgcggcatc ctgaagcttc ttctttgcct gatcgttccc cgcgacatac gagagatcga
     1621 atcggctctg cacaaactcc agcagccccg ccgactcgga ttcaatcagg tctttcttgc
     1681 gctcggtcaa aaacttgagc gtgagcggct gacgattctg tacggcgtgc gcaatcaggc
     1741 tctggatctg cattcgcttc agtcccgcgc caagcttggc taaaaccgtg tcgctgactt
     1801 cggagcctgc cggcagcggc tgctcgcgca acagtacctg gacatactca aggcgctcat
     1861 cttcttccgg cagcggaatc tgaatggaag caacaccggg attctgcacg ataccctggt
     1921 tcagctccgt ctggctctct gaaatcaggc agatggttac gtccgcgttc aggaaatccg
     1981 gattgcgcgc ccagcgcttc aggatcacca gcgcattgcg gtcttcggcg gacatgttgg
     2041 agacatcacc cgcgggcgct atggtctcgg cgaagtcaag aaccagcgcg atcttccgtc
     2101 catcggcaat tcgcagccgg aggtaattgt ccaggatgtt caatacggca tcgggattgc
     2161 gcggcaggcc actgcgggca aagctggtgc cgtggaagct gtcataacct tccaaagccc
     2221 ggcgaaaatc tgcctgggta tccgcgttgc cgaaggccat acctccgcga tcatagtgca
     2281 gcaccaggtc gcgctggcca aagagcgcgc cggataagaa ctgttcgagc gataggaatg
     2341 tggttccgga gggctggcgt aacgggatta cgtcgcgtac attgccgtag agcacgaaca
     2401 aggcgtaaga ccgcgagtag tacttttctg aaagctcgcg cgcccactcg ggcagagcat
     2461 caaggtattt ctcggtgctg ggtgaggctg aagacatatt tctgtcgtgg tgctactgcc
     2521 cttaacttcc aatcctcgtc cgctgggctg ccgaagttga agtcgtatcc gtgtcaacgc
     2581 cctgcatgat cccttccatg tccggcgtga ggctgctgaa gatcgcctcc acctgctgaa
     2641 ctgtctgctc ggtctgctcc acatcatgga ccaggttggc gagctgatcg ctcacctgct
     2701 gcggatcgcg catcgtcact gactggtcgc gtacgagctg aagcacgtct tccacggctg
     2761 cacactgcgc gtcgacaacc tggcggttct ccacgatctt ctggaatttt tcgagccgct
     2821 tactcaggat ttcaattctc ttcttgttga tgtcctgtac cttcggcggg tcctgactca
     2881 tgcgctgctg cagggccgcg atctcgcgct tgatggtgtc tgaatccgag gttttcaaat
     2941 attggcgctg ctgccacgcc gccatcagca ggcgcgcata ggcgtgcagc aggccttgca
     3001 gccgctggtc catttgttga acgtaaatct gtgaggtgga agagagctgg gcaaaattgt
     3061 tgcggatgga gccacatacc tgcgccagag ctatgtaacg gttctgcatc tctgagggca
     3121 gggtacgcag caggtcgctt aggctgcgct ctttcgcttc ctgctcttcc gcgaacttcc
     3181 acgagcgcac cagccgctga aagcgcgagt tggtggaaac cgcggccagg tacatcaact
     3241 caagcccgcc ggcgagcaca attggcaggg cgctgccggt aacaacagcg aacacgccca
     3301 tccccgccag cgtgatccag ttgtactgga tcttgaacgc ctctttaacg aagttgatgt
     3361 ccttctgcgg gccgccgggc gagcttggat ccgcaccccc gggctggccc aatccgagga
     3421 agcccattag atgctcaccc tcacgtggcc gcccacacct ggcgcgctct tgagccggcc
     3481 cagcacataa tgctgtagct catggaattc gtttttttcc ttgagctcaa ggtcacgcgg
     3541 acggtcaaac ggtacctgca cgtcttccac aatggttccg ggatgcgagc tcatgatgaa
     3601 aatcctgtcc gccaggtaaa cggcctcttc cacgtcatgc gtaacgaaga gaattgtaca
     3661 cgcggtctcg tcccagattt tcagcaaaag ctgctgcatg tcactgcgtg tttgcgcgtc
     3721 cagcgcgccg aacggctcgt ccatcaggat cacggaaggg cgcaacgcca gcgtgcgggc
     3781 aattgccacg cgctgttgca tgccgccgga gagtgtgtcc gggtaaacat cagcaaactc
     3841 ggccagccca acctgctgta aaaggtgatc ggcagtttct ttgcgctgcg ctgccggcac
     3901 gccgttgatc ttcattccgt attcaacgtt ttgccgcacc gtgagccacg gaaacgaagt
     3961 gtatttctgg aataccatgc cgcgatcttt gcccggcgcg gtcacggcgg cgccattgac
     4021 catgatttcg ccggtcgtgg gatgatccag tccggcaatc atccgcagca acgtggactt
     4081 gccgcatcct gaaggcccca gcagaacgcg gaactcaccg atgtcgcggc cggcaggcga
     4141 gaaggcgtct tccacttcca ggcttacgtc cttgattgcc tcaatgcgct cgcctctggg
     4201 tgaatagaag atccgggaga cattgtgaat ggcgattttt gcctttttag tttccactgc
     4261 tcaccgcctt ggtccgcttt gcgccagcca ctgcctctga catggcagca gaagattgcc
     4321 ccgcctgccg ccacgggaag aggatctttt ccaggaaagt gagcaatgcc ctgaacagga
     4381 acgccgccac gccaatagca atgattccgg cataaaccag gtccggccgg tgaaattcat
     4441 aggcagactg caccatggcg cccacgccgc ggctgcggtt cacgatttcc gccagaatca
     4501 cgtaggtcca gccaatgtcg tacaagatac ggaaggaaga aaaaattccc gggaacgacg
     4561 cccggaacat cagccacaaa acctgatatt ttttcgcgcc cagtgtgtaa gcggtctcca
     4621 gcagcgacgt atctacccgg ttcacctctt ctaccaccac cgccagcagg tagaagaaca
     4681 tgccgaacca caggaatgcc accttcatgg tttcgtagat tccaaaaatt ccgataaacg
     4741 ccggcaggaa tgcggtgatc ggcatagaac gcatcggcgc ggcaatggga ttcacgaagt
     4801 cgtaaaccca gcggaagctg gccatcacca gcccgagagg aatggccact acaacgcacc
     4861 agagaaatgc gtgcgcaatg cgcagccagc tcatgtaaac attgcccagc agtccgcgct
     4921 ctgaaaacag tgacggaaat gcgcgtacta cctcaatggg cgtgggaaag acgtagctgc
     4981 tgatccaatc ccagtgtgtg atcagcgccc aggccgtgac cacgaatacc cagctcaaaa
     5041 cagcgagcgt gagtttagtg gccggcgagg tttccttccg gattgtaaag agatctgcca
     5101 tttttgagga cccgaggtga agaaggtttg ggaggcgctg agtgcgcctc cctgatccgt
     5161 gtggctactg gttggcgtac agcttgatgt ctgtacggcg gttcttttcc cggccttcag
     5221 gcgtggcgtt ggtctccagc ggcctgtccg ggccgttacc ggcaatgcgg aagcgcgcgc
     5281 cggggaagcc atacttgtcc atcaggtatt cgcggacggc ctctgcccgc tggcgcgaga
     5341 gctgcatgtt atagccacgg gctccggtgg agtccgtgtt gccctcgatg tccaccaccg
     5401 tgttctcgta ggcacgcatt tgcccgccga tctcatccac aactgctcgc gaatccaggc
     5461 tcatgtgcgc cgaattcgga tcaaagtaga tggagcggtg ttgcgtcgcg agcggagtgg
     5521 cagtctttgc caccggcttg tactcgatcg gcgcctccgt cgaagcggtc gagaaaccgg
     5581 cattgttcaa ttgctggacg taacgacggt ccacgctatc ttcagggttg ctggtccgct
     5641 tgatcattct cagttcgcga tacatgtcct gcgccatccc gaagatgttg gcatagtcag
     5701 agttcgcgcc cttggtcccg aggaaagaga gattgtcggc gtagtcagcc agcttcacac
     5761 cgccgagcat ggtcttcgcc aagtcagaag ggatgttgaa gtccttgatg gtgccgatca
     5821 tgttgtaagc gcggtccggc tggttcttga tgaactccac accctccagc cagccctgcg
     5881 aaaacttgag cagggtctgc ggatgcttcg cggcaaaacg gtcgctcacc accagaatgt
     5941 cggcaatcag gcggttggcc acgcgcgtgt catagatctt tttcgctccg gcgcgcttgc
     6001 ccactgcgtc actcatgtct gggtcccagg caacggccgc gtcaactttt tcctgcgcaa
     6061 agagcactgc gggctcaatg ccgtctttgg tatgtaccgc gttcttgaaa atctcattgc
     6121 gctgttcggt gctcaggccg gaagccttca ggccgttcca aagcaggaag tgggagggcg
     6181 tgtacggcgc aaaagccacg gtcttgccgg ccaggtcttc aatgctgttg atgccctgct
     6241 tgccgattac gccatcggcg ccgcgcgacc agtcaaccat caggaaggca tgcgagccaa
     6301 agcccttttc ctggaactgg ccgtaatctt tggcgtagac gtcaagcgtg gtcagcatca
     6361 cgtcaacgtt gttggtggcc agcgccgatg cgccttctgt ccagtcgtcg atgatcttga
     6421 atgagacttt caggcccttc ttcgcgaaga tggagtccgg cgcggtgtcc aggccgccgt
     6481 tcgcaaccag gccgcccacg cagccgaccc acacgttcac gcgtacgcgg acttcagcgt
     6541 tgtcgtcgct ggccgaaacc ggcagctcca gtggcttgga ggtgtccacg cggcctgtac
     6601 tgctgcctga agaagagccc ttgccggtaa ggctgcccag gtcgagccag ccgtacttgt
     6661 acaggctgta gcccaccagg gccagcccaa tcaggaatat aagcgcccaa ccgccctttt
     6721 caattttgac tgccataatt cctccgcgtc cgtttcgctc aatgggtctg gttcaaatta
     6781 cccaattacc caattactca attaccaatt tccttcagct cttctgcggc tctttcccgc
     6841 caatggtctt ttccaccgcg ccgccgctgg cagcgcctgc ggctgccgga gcggccaggc
     6901 ccatctcgat cttgaactgc ttcaccagtt cgctcgcctg catcttttgg gcttcttctt
     6961 ctatcttgat cttctgctgg tccacgttgc ccatggccat gtccatgcgg gcttcgttga
     7021 ccgcggtcat ctcttcgatt ttgcggacca tctcgtcatg cgtctggctg atgccggcta
     7081 cgttgaactg ctccatcacg tcggcaacct tcttctgcca ctgtgcgcga cggtaatcgg
     7141 caatcgcgct gagcgcttcc tgcgtcttgc gctctttctc gtccatgaac gccttcttca
     7201 ccgccattgc cttgtcaaaa gcggtgcgtg ctgtggtgag ctgcccctgg gtgcgggcca
     7261 gtgcggcctt ggtctgttcc agctgcgcgg caaagctgcc ggcaatatcg tcgcggttgg
     7321 cctgaatcgc cgccttcacc tttgcggtga gattggcaat gtccgcctgg tacttggctt
     7381 cttcccgctc cagcagcgtc acattggcct tcaccatggc gatgctctcg ttcatccggg
     7441 ggacctggtc attcatgtcg cggatgttct gctggaggat caattccggg tcttctgcca
     7501 cggagatgaa gaagccgaca aacgaccgga tcatgcgagt gaaacgctgc cacatagata
     7561 gctccttttg cttatgactg ttgaccggac ttccggcctg ccggatcttt tgactgcgct
     7621 ccgggctgcg ttgctgaagc ggcggacgac agcccgccgg tggtaatggg gttctcactg
     7681 acgaacggcg ctaccgcgtc agaaatcttt ttctcttcct gctgcttttt gaggcgccag
     7741 ccgaagaaac gctccttttc gcgcgtgacc tcatcgttgt tggcctgcat cttggcgcgc
     7801 tgttcggaga caaacttgtc gatctccgcc tggatctgcg cgttctcctg gttcttgctc
     7861 gcttccagtt cggtgatcgc tttttcctgc acccgttcaa aggtatcgag cgcgcgatcg
     7921 cggcgcacgg catcctgaat aatgtccttg atgtccacgc cagcggcgtc cagcgccacc
     7981 agcacgctgg agcgctttac ttctgccggc atgctgcgaa tgtgctcgct ctgcagcatc
     8041 tccgcgactt tgaagatcga atagcctttc ggcgcgtcag gaatctcggc cgctttgtag
     8101 atatcgtcga aggaggcttc cttggagacc ggcgcggtga atttcggctc agccatcgcg
     8161 atcccggagg cgatctcagc caccgtctgc gctgcgctgc ccgccgatgc tgccggctga
     8221 cccgcttcag gtgtgccggg cgtcgccatc cctgaggggt cttccacgga aacgaaatag
     8281 ttgtaccact tcttagtcat accacctcca acacggcagt cctgtgcccg cagagtccct
     8341 ggaactgtcc gggaagcttt ccgggtgggg gagttcgaac ctggtattct gggctgacgt
     8401 ggaaaagtac ttccgttcca acgatttgtc aatgcggctc atgcccaaac gccccctcag
     8461 gggaaacatt actcagcggt aatcaactat tccgagccag ctatcgcttt taaagttcat
     8521 ctacgctact tattacatgc cctgaagtta cgcccaacaa gtcagctaaa atgggcagtc
     8581 tcactgttca aaatgaacgc ggttttgaac tgacaaaacg ccggaatcag gatccataaa
     8641 cgtgccagca aaaacattac ccgccgtgct cagccaggtg gtggaatcga aagccgagta
     8701 cgatcttcgc ctgctggcgc agcagctggg caccaactat cgctcgctga tgtactggct
     8761 gcgtggcgac cgccacattc ccgcctatct gctgccgcgt atttgcctgc tggtgaaaaa
     8821 ttacgaagct cttgacctgc tggagagcca ggcaggccgc gtcgctttca aaatccccga
     8881 tcccaaacgg actaccgaag aacaattcaa ggccatctcg gcgctgatca aggacgtggg
     8941 cgaagcgctg gaaagcatcg gctcaacgct ggccgatgga gaagtggaag agcgcgagct
     9001 tgtcgtgacc atcccaaagc ttgaggccgt gatccaggag tgcgcctcgc tcaagtacct
     9061 tctcgaggag ctgtataaac acaagaagaa gaaaacgaaa tagcctgtct cgtgtaaaaa
     9121 tcaaaggcct ccagcagaat ctgcaggagg ccttttcatg gatcgcaaat aaaaattatt
     9181 tctgttcttt tttctctacc tgcttaaatc ctgcggggat ttcgaacaaa ccggcatcga
     9241 cagccgagtt gctgaatgac gtgaccgtgg ttgtcatgtc catcaaggag ccgccctgcg
     9301 cagaggctgc cttcgcgctg tcatcatccg agctgtcttt ctgcttgtgc ttcccgaatc
     9361 cccccatcat gccacccagc cctttagtga tggcgttgcc ttccttcttc tccggcgtag
     9421 gtgcggcgtt ctggccggtc gtacccgggt tcggccccat tcccacgctc acgtacgaaa
     9481 gcagcggcat tccgttcaat ttttccaggt tcttgttgta ttcgaccatc ggctggttga
     9541 tctggagatt cgcattgttc tgcatcatcg cgccagggac ccagtcgagt tccttggcca
     9601 tcttggcgta gaagcgcttc acttcgtcgt agcccttcac cggcgccacg taattatcgg
     9661 aatttaccca ggtattgccg gactggttgt tgcccttcga atcctgtgcc tccatctcca
     9721 tgtccacgcg aattttggtt tccttggcgt tgtagttcag gatttccttg cttccggcgc
     9781 cgggctcaat ggaaatcttc ggcttgatcg tgaccttggt gtcctcgcct ttcttaccgc
     9841 tgcgcttcgc ttgctcctca gcggccttgc gcttcgcctc ggcgacctgc tccttcatct
     9901 gctcgaacgt catcaccgaa taggtcttgt gtttcatgtc aatgtcgatg acgcgccgtc
     9961 catccagatc gaaaatctgc gccgttccca gcgaactctc gtggcgcatc ttgttgcctt
    10021 tcacgctcac ggtggttgtg cttccctgca tggcctggcg cgcgtccttg ctgaagatgc
    10081 cggccatctt catcgcgcct gttgcggctc ctccggtgat cttgctctct tccgtgtatt
    10141 gaacgtcagc aaaggcaaag ctgttgctga atagaaacgc acttgcaaga acaagcgtga
    10201 tggctcgtct catcggacgt gtaccccctg agcaccgcat tatagcgtta cggctacggc
    10261 gccggtcgcc acgcgaagct ccagggagaa gtaaacgtcg tgcgcgggct cagcccttga
    10321 agtccgggtc ttctgaaatg tgctggatcg gctgcaccag aatataggtt gcgtttgcgc
    10381 cgcagtcgcc gcatacaggg aagcgctctc cggcctgaag ccagcagcgg ttcggtgcgc
    10441 acgcagcgtg cgccgaccgg taaatggcag aaatctccgc cagatctccg gtttcaaact
    10501 gtacctgtat gggcgggcga attttagcta ctctcattaa aggtccgtcc aagtctaagg
    10561 attaaggcag gcgtaatacc taaagcaaag accgtgccac ggtaagtcat tgaatcggcg
    10621 tggcaaccat tttggtgcaa gctgctggcc tgcaattttt tccaaatcgc gcgtaccttc
    10681 cgcagcagct tcacttaaat gacatttcac ggcgctgccg ctctgacgcg gtttgccgct
    10741 tgtgtgcaca gctggccaga gaagatcatc cagcgcatgg aggttgtgcc gtgatcaaga
    10801 ccaccacatt agctctgctg ttgctcaaat actttcgcaa cttcaatttc gtcgctccgc
    10861 tccgaaccgc cattggaatg cgcgaagcga aggaaattga tgcatttggg gcagactgct
    10921 cggcgcgcga gtcggcctcg cagtctggta tgtcctcagt cgcggtgatg gcattctggg
    10981 cagcggtgag cggtgtgatg gtccggacgc ggctgctggc cgggcgcgca cttgagagat
    11041 ggaagcctcg gcttccggct ctgctggtct gcttccgtgc cgcgctcggc ccgctgatca
    11101 tcgcgctggc agctttctcg ccaacgcgtt ttctcctcgt ggcctgcatc gggctggcat
    11161 cgctcactga cgttcttgac ggcatgctgg cccggcgctg gggagtggca acagaaaacc
    11221 tgcgccgctg ggatacccgc gctgacactt tcttctatct ctgtgttgcc atttgcatcc
    11281 tgctccgctc tccgcagtcc attgagagcc gcatggtgct cgttgccggg ctcgctacag
    11341 cagaggtgat ccagcacgtg atcgccgccg ctaaatacgg ccgtcacgcc agctatcact
    11401 cttgcatttc gaaactctgg ggattgctga tggctgccgc caccgtcgcc ctgctcggct
    11461 tcagcgtgga caactggttc ctggatatca caatcgcgtg gggaattctg tgcaatgtac
    11521 aagggctggt gatgaccctg atgctcccaa cctggaaccg cgatgtgcct accctgtggc
    11581 acgcatggaa gctgcgccgg gctctcgcct gtgcgccttg acagggaagt gcacctcaag
    11641 cgcattcccg ttgtgcttct tcgtgtcctc tctcgtaaat gcaaccggga gtcactaagg
    11701 tctgtcactc ccgagagccg agcgccccgg cgcttacgcc gtaggccgga gcgcagcgaa
    11761 gcg
//
LOCUS       DASQYP010000029         5297 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_276218, whole genome shotgun sequence.
ACCESSION   DASQYP010000029 DASQYP010000000
VERSION     DASQYP010000029.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 5297)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5297)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5297
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_276218"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2616
                     /locus_tag="VE783_00845"
     CDS             <1..2616
                     /locus_tag="VE783_00845"
                     /inference="COORDINATES: protein motif:HMM:NF020700.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX51967.1"
                     /translation="DVVVGTVNAQDVQVTINGVAAQVANRTYAATAIPLVVGKNTIQA
                     VARDRAGNGTTTSISVTRVLPAQPPPPAIGTGVITQTVRAVSGDNQTGTIGTQLSSPL
                     IVSVTDPANRPVANQSVVFKITGNNGGIAADTSSTPSAALAVNTDLNGKAQAVWTLGM
                     RSGAGINTVQVSSPLAVSPVNFTATALTADAGTIVIDSGNGQTGVLGQALPFPFVVAV
                     VDAGHNRVANVPVTFNVRSGGGNLAGSPTQTITTDSNGRAIAVLTVGTETGNSNNVVE
                     ATFPGNGGIPVAFSASARAPADPANTSISGVVLDNSNNPIVGATLRLLQTNQGNANNL
                     PVQIGTPVQTDSHGTFLIQPAPVGFFKLMADGTTAAGSQSYPTLEYDIVTVAGNNNTV
                     GMPIYLPALDTVNKLCVDETHGGTLTLPQVPGFSLTVLPGSATFPGGARQGCVSVTPV
                     NGDKVPMEPGFGQQPRFIVTIQPVGTKFDPPAPITLPNVDGLPPKAVTEMYSYDHDLS
                     MFVAIGTGTVTADGSAIVSNPGVGVLKAGWHCGGDPNQSGGAAPVSVSITSTQSPQVE
                     VGKTITITASGSPQPGTYSWTSSDTSVATVQSSSDGTAVILGSGVGTATITVTFTCQS
                     GATATATVDVKVTTADIVVIGWVNSSVISLPSGASFLLRIDINTPLVCSALLLDWLVG
                     IPTDLFSQSEVDYANAYLLIHSGNSQPPSTINPDTQLAGGDFRLFNRLQATYSTSNGT
                     ISNFSAIHSVAQVGTTPDPCGLLPNASGQAHPSNGSNGVTTSGTGVYQLAEGRLGTAG
                     QRINKTLNGTTTPWIWSVIRFDASGTPDTSDHSIFPTFYVYQDGSLIANYPQSAPSAF
                     IPLQDTYQRLPSQIP"
     gene            2622..3419
                     /locus_tag="VE783_00850"
     CDS             2622..3419
                     /locus_tag="VE783_00850"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX51968.1"
                     /translation="MNTKLVRLSCHWWAVGFQCVMVVLVAASAAAQGRGSVDEAISEI
                     KSGHVDPVVLQRLARAHAVEAINPLREQFARTQDDLLKDAIASTLVRLGVEDRSYWDY
                     LEQNARKAIESDAPFPSAFDVQGHAIRKQLSPEFLEWAKRNQLDVQQAVTIQMQRMPA
                     QVSFLAATRDPRATELLRRAMASRNYLVEAVAARGLASLQDSDSVSLIVTACRRAPSE
                     AAELVARSLVFFQTPQAQSAAESFIQNPETLDQLRKLSKEKGSSVLF"
     gene            3476..>5297
                     /locus_tag="VE783_00855"
     CDS             3476..>5297
                     /locus_tag="VE783_00855"
                     /inference="COORDINATES: protein motif:HMM:NF014427.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ig-like domain-containing protein"
                     /protein_id="HYX51969.1"
                     /translation="MVIRASIASLKGALLALSLLLVVTTAAEAQLNQNCTVSILNRTA
                     QVQQDGSWSISNVPAGFGLVRARATCVQGGATQFGQSELFQIAANQITGFTANIKLGN
                     TTPIPVALSLQLPVATLSSAGATAQLTTTASFADGGLKDVSGGSSGTQYTISNPAIAT
                     VSADGLITAVSSGTAVVQAVNEGRQAIATIQVLLAGASHGGIPDDWAIAHGLDPNDPA
                     MPFEDPDHDGLTNLQEFQNGTDPHNPDTDGDGLTDGQEVLVYHTSPVLFSTDGTGIPD
                     GIEVQTNTLGGSFASKLAAALRSLEVKPPSFVLNVNTIQGVASQQLAVLGHLIDGKTT
                     LDLTSTQLGTNYSSSDLTICNFGAPDGNVFSGSNGSCVITVTNSGFTAQATAVVRTFA
                     PTSLAFISIPGFANGVDVNGNFAFVAAGAAGLQVVNVTDRTHPILAGSLALPGNANAV
                     KLLGNLAYVAAGSAGLHVIDVTNPSVPVLLGTLNTGGNALNVAVRGTRIYVANGSNLL
                     LADATNPAAPTKISTLALTGTVQGVDVDTLRNLAVVAAGPGGVSTVDISTPNTPKLLG
                     SVPTGDARQVAMRGNFVFVADFQNSTTSVDISLPSAPIVLS"
BASE COUNT         1145 a         1529 c         1524 g         1099 t
ORIGIN      
        1 gacgtcgtcg tggggacggt caatgctcag gacgtacagg taaccatcaa tggggtggct
       61 gctcaggtag ccaaccggac ttatgccgcg acggcgatac cgctcgtggt cgggaagaat
      121 accattcaag ccgtagcgcg cgatcgcgca ggcaatggga ccaccaccag tatttccgtg
      181 acgcgcgtat tgccagctca gcctcctcct ccagcgatcg gcacaggcgt gataacgcag
      241 acagtaaggg ccgtttccgg tgataaccag acaggcacga taggcaccca gttgtcatcc
      301 cctctgattg tgagtgttac tgacccagcg aaccggccgg tcgcgaacca gtcagtggtt
      361 ttcaaaatta cggggaacaa cggcggtatt gccgcagata ccagcagtac gccttctgca
      421 gcgcttgccg tgaacacgga cctgaatggg aaagcgcagg cagtctggac tctgggaatg
      481 agatcgggtg caggtataaa caccgtgcag gtatcttctc cgctggcggt gagcccggtg
      541 aatttcaccg cgacagcgtt gaccgcggat gctggaacaa tcgttatcga ttcgggcaac
      601 gggcaaaccg gcgttctggg ccaggcgctg ccatttccat ttgtggtggc cgtcgtcgat
      661 gccgggcaca atcgggttgc gaacgttccg gttaccttta acgtgcggag cggcggcggc
      721 aacctggccg gctcgcctac ccagacgatc acgactgaca gcaacgggcg ggcaatcgcc
      781 gtgcttactg taggaactga aacaggaaac agcaacaacg tagtggaagc cacattcccg
      841 ggaaatggag gcataccggt tgctttttcc gcttctgcca gggcaccggc ggatcctgcg
      901 aataccagca tcagcggcgt cgtgctggac aacagcaaca atcccatcgt cggcgccacc
      961 ctacgcctgt tgcagactaa ccagggaaac gccaacaatc ttcccgtgca aattggaacg
     1021 ccggtacaga ctgatagtca tgggacgttt ctcattcagc ccgcaccggt aggtttcttc
     1081 aagctgatgg cggacggcac caccgctgct gggtcgcaaa gctacccgac actcgagtac
     1141 gacatagtca ctgtggccgg caacaacaac acggtcggca tgcctatcta cctgcctgcg
     1201 ttggataccg taaacaaact ctgtgtggat gagacgcacg gtggcacatt aacgcttccg
     1261 caggtacctg gattttcact caccgtgtta ccgggatcag cgaccttccc gggcggcgcg
     1321 cgccagggtt gcgtgagtgt gacgcctgta aacggggata aggttcccat ggagccgggt
     1381 ttcggccaac aaccccgctt tattgtgacc attcaaccag tggggacgaa gttcgatcca
     1441 cccgctccga ttaccctgcc caacgtagac ggcttaccac ccaaagcggt aacggagatg
     1501 tattcctacg accacgatct gagcatgttt gtggcgatcg ggacgggaac agtcacggcg
     1561 gacggatcag cgatcgtctc caacccgggc gttggcgttc tgaaggcagg ctggcactgt
     1621 ggtggcgatc caaatcagag cggcggtgcg gcgccagttt cggtctccat tacgtctact
     1681 cagtctccgc aggttgaagt cggtaaaacc ataacgataa cagcgtctgg tagtccacag
     1741 ccaggtacat atagctggac aagtagtgat acctccgtgg cgacggtgca gtcctccagc
     1801 gacggaactg ccgtgatcct gggatccgga gtcggcacgg ctacgatcac tgtgactttc
     1861 acgtgtcagt cgggagccac ggccaccgcc accgtagatg tgaaagtgac taccgctgac
     1921 atcgtggtca ttggttgggt caactcaagc gtgatttcct tgcccagcgg ggccagcttc
     1981 ctcttgcgca tcgacataaa cacgccactg gtctgttcgg cgctcctgct ggattggctt
     2041 gtgggtattc ctactgatct gttcagccag tctgaagtgg attatgccaa cgcatacctg
     2101 ctgattcact caggtaactc acagcctccg tcgacgatca atcctgatac gcagcttgct
     2161 ggcggagatt tccgtctctt caatcgactg caggcgacct actccacgtc gaacggcacc
     2221 atttccaact tctccgcgat tcacagtgtt gcgcaggtgg ggaccacgcc ggatccctgc
     2281 ggattgctgc ccaacgcatc ggggcaggca catccttcaa acggttccaa tggcgtcacc
     2341 acatccggta ccggcgttta tcaacttgcg gagggccgtc tcggcaccgc cggtcagaga
     2401 atcaacaaga ctctaaacgg caccacaacg ccgtggatct ggagcgtgat ccgattcgat
     2461 gcttcgggaa cgcccgacac ttcggaccat tcgatcttcc cgacatttta cgtttaccag
     2521 gatggatcgc tgattgctaa ctatccgcaa agtgcgcctt cagcgttcat cccgctgcag
     2581 gatacgtatc agagattgcc ttcgcaaatc ccatgagcca tatgaataca aaactcgttc
     2641 gcttaagttg ccactggtgg gctgtaggtt tccagtgcgt aatggtggtg ctggttgcag
     2701 catcggctgc cgcgcaaggc cgcgggagcg ttgatgaggc gattagcgag atcaaaagcg
     2761 gtcacgttga ccctgtggtg ctgcagcgtc tagcgagggc gcacgcggtg gaggcgatca
     2821 acccgctgcg cgagcagttc gcccgcacac aggacgatct gctgaaggat gccatcgcga
     2881 gcacgctggt aaggctgggc gtagaagacc gcagctactg ggattatctg gagcaaaatg
     2941 cacggaaagc tatcgaaagc gacgcgccgt tccccagtgc atttgacgtg cagggccacg
     3001 cgatacggaa gcagctttcg ccggagttcc tggaatgggc gaagaggaac cagcttgatg
     3061 tgcagcaggc ggtcacgatc cagatgcaaa gaatgcccgc ccaagtcagc tttttagcag
     3121 ctacccgcga tcccagggca accgaactcc tgcgcagagc catggcatca cgcaattatc
     3181 tggtggaagc ggtggccgca cgcggactgg ccagcctgca ggattctgat tccgtatcgc
     3241 tgatcgtaac ggcatgcagg cgagcacctt cggaagcagc tgagcttgtg gcgcgctcgc
     3301 ttgtcttttt ccagactcca caggcgcaga gcgccgcaga aagcttcatc cagaatccgg
     3361 aaacgctgga ccagttgcgc aaactcagca aagagaaagg ctcgagcgtt ttgttctagg
     3421 caaggctgaa aagcatggtt gctgaagcag gaagggaacg caggtgaatg tggctatggt
     3481 aattcgtgca tcgatcgcat ccctcaaggg cgcattgctg gcgttgagcc tgctgctggt
     3541 ggttacgacc gcggcggaag ctcaactgaa tcaaaactgc acggtcagca ttctgaaccg
     3601 gacagctcag gtgcagcagg atggcagctg gtccatcagc aacgtccctg cgggattcgg
     3661 tctcgtgcgc gccagagcca cgtgtgtaca gggaggcgct acccagttcg gccagtccga
     3721 actgtttcaa attgcagcca atcaaatcac cggattcact gccaacatca agctgggaaa
     3781 taccacgccc attcctgttg ccctgtctct gcagttgccg gtggcgaccc ttagttccgc
     3841 cggcgcaacc gctcagctaa ccaccaccgc atcgttcgcc gatggtggcc tgaaggatgt
     3901 gagcgggggg agctcgggaa cacaatacac aatcagcaac cctgcaatcg ccacagtttc
     3961 cgcggatggc ttgatcacag ccgtgagcag cggaacggcc gtggtgcagg cggtgaacga
     4021 gggcaggcag gcaattgcca caattcaggt cctcctggcg ggtgcttcgc atggtggcat
     4081 tcctgatgat tgggcgattg cgcatggttt ggatcccaac gatcccgcga tgccattcga
     4141 ggatccagat catgacgggc tcacaaatct gcaggagttt cagaacggta ctgatcccca
     4201 caatccggac acggatggtg atggacttac cgacgggcaa gaggtactcg tctaccacac
     4261 aagcccggta ttgttttcca ccgatggaac aggcattcct gacggcattg aagttcagac
     4321 gaatacactg ggtggttctt tcgcctccaa gctggccgca gctttgcggt ctctcgaagt
     4381 caagcctcca agcttcgttc tgaatgtgaa cacaattcaa ggcgtggctt cacagcagct
     4441 cgctgttctg ggccacctga tcgatgggaa gaccacgctt gatcttacgt cgactcagtt
     4501 gggcaccaat tactcctcaa gcgacctgac catctgcaat tttggggccc ccgacggaaa
     4561 cgtattctcg ggctcgaatg gctcctgcgt gataacggtt acaaacagcg ggttcactgc
     4621 ccaggcaaca gcggtagtgc ggactttcgc gccgacctct ctggcgttca tttccattcc
     4681 cggtttcgct aacggtgtgg acgttaacgg gaactttgct tttgtcgccg ctggagcagc
     4741 agggttgcag gttgtgaacg tgactgaccg tacccatcca atccttgccg gctctcttgc
     4801 cctgcccgga aatgcgaacg ccgttaagct gttgggcaac ctggcatatg tggccgccgg
     4861 ttcggcgggc ctgcatgtga ttgatgtaac caatccttcc gtcccggtac ttctcggaac
     4921 gctcaacaca ggcggcaatg ccctcaatgt cgccgttcga gggaccagga tttatgtggc
     4981 gaatggatct aacttacttc ttgctgatgc cactaaccct gcagcgccaa ccaaaatatc
     5041 cacactcgct ctcaccggaa cagttcaggg cgtggatgtg gacacgctgc ggaacctcgc
     5101 ggtagttgct gcgggcccgg gtggggtctc aaccgtcgac atatccacgc cgaatactcc
     5161 caagctgctg ggctctgtgc ccacgggcga tgcgcggcaa gtggcgatgc gaggcaattt
     5221 cgtattcgtt gctgacttcc agaacagcac aacctcggtc gatataagct tgccgtccgc
     5281 accgattgtg ctttcac
//
LOCUS       DASQYP010000030         5061 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_106823, whole genome shotgun sequence.
ACCESSION   DASQYP010000030 DASQYP010000000
VERSION     DASQYP010000030.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 5061)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5061)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5061
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_106823"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..240)
                     /locus_tag="VE783_00860"
     CDS             complement(<1..240)
                     /locus_tag="VE783_00860"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="RND transporter"
                     /protein_id="HYX51970.1"
                     /translation="MRRTLLRLASTTSLLILLTGCVVGPNYRRPAAPVAPAWREQAPW
                     RAADPKDAIPKGTWWTIFADDELNQYMVQALKSSQT"
     gene            complement(237..1451)
                     /locus_tag="VE783_00865"
     CDS             complement(237..1451)
                     /locus_tag="VE783_00865"
                     /inference="COORDINATES: protein motif:HMM:TIGR01730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HYX51971.1"
                     /translation="MTQLAEQPKPQTKAPVTGSTGSTSPTGSRPGRFALLILAILIIA
                     GAVTIAHRLSDRKVLARETERLAIPTVNVIKPIAEPGDEQLTLPAQLQAYVESAIYSR
                     TNGYLQRWYKDIGSQVKKGDLLAEIETPEIDQELAQAKATRQQIEAQLQLAKSTADRW
                     ANLRKSDSVSQQEADQQASAYTQAQANLAAANANVKRLEQLESFKRIYAPFSGVLTKR
                     NVDVGALINAGSTGQNRELFDIAQLDPLRVYVSVPQANAASIKRDMPAYLEVQEFPGQ
                     KINGKVVRTADVIDPATRTLNTEVDVPNPNNRLMPGAYAQVHFAVPVQHVRLSVPVNT
                     VLFRAEGPRVGVVDANGKVRLKPITIGRDYGNKVEILGGLDPSDQIIVNPADSLADGQ
                     QVNVKSGGQPQS"
     gene            complement(1448..4651)
                     /locus_tag="VE783_00870"
     CDS             complement(1448..4651)
                     /locus_tag="VE783_00870"
                     /inference="COORDINATES: protein motif:HMM:NF013069.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HYX51972.1"
                     /translation="MWIVRLALNRPFTFVVMALLILILSPIVVMRTPVDIFPDINIPV
                     ISIIWQFNGMSAQEMTDRIVSNTERGLTTTVNDIEHTETQAMDGRAITKVFFHQGANL
                     QTALSQVTAISQTALRSLPQGTNPPLIIVYTASSVPIVQVGISSKKMPEQALFDYSVN
                     FIRPQLTTIPGAAIPYPYGGKQRVIAVDLDIPALQAKGLTPVDIVNAVSAQNLILPAG
                     TAKIGDLQYQVQMNGSPSSVAGLNDLPVKTTNGSTTYLREVAHVRDGFSPQTNIVRQD
                     GVRGTLITIMKNGNASTLDIVSNVKDILKRVATTLPEDLEMRTLFDQSLFVRASIDGV
                     LREGLTAACLTGAMILLFLGNWRSTLIIAISIPLSILCSVITLSALGETFNIMTLGGL
                     ALAVGILVDDATVEIENIDRNLAQGKELRQAILDGASQIAVPAFVSTLCICIVFVPMF
                     FLTGVARFLFVPLAEAVVFAMLASYLLSRTLVPTLVLYLLRGHEHEDKFKVGRGFSAP
                     FKRLQIGFERRFEQLREGYNRALKHAMEHRALFATAFLGFCILSMGLVFFLGEDFFPE
                     VDAGIFRLHVRGRAGLRIEETARLCDEVENYIRSRIPKEELVTVLDNLGLPYSSINNT
                     YSTAGTVGTSDAEILFSLNQEHHRPTAQYVKQLRDELPRQFPGVEFFFQPADIVSQIL
                     NFGLPSPIDLQVIGKDHVKNYQIAQDLANALRHVPGAADVHVQQLMNSPALRLNVDRS
                     KAQQVGLQQRDVAQNLLVSLSGSFQTSPTFWLNPENGVTYSVAVQSPEYRIDSLQALM
                     NTPIAAPGAPAPQVLSNLATLNPSVTPAVISHYNIQPVFDVYASVQDRDLGGVARDTR
                     RIVAEFQKKLPRGTQLVARGQMESMSSSFVGLGIGLIMSIVLVYLLIVVNFQSWLDPF
                     IIITALPGALAGIVWILLLTHTTLNVPSLTGAVMCMGVATANSILVISFARERMAEGL
                     NALDAAMEAGYTRMRPVIMTALAMIIGMVPMALGFGEGGEQNAPLGRAVIGGLIFATV
                     ATLFFVPVIFSILHREKKEHEPVQELVPAGSLGDYNG"
BASE COUNT         1080 a         1389 c         1556 g         1036 t
ORIGIN      
        1 cgtctggctg ctcttgagcg cctgaaccat gtattggttc aactcatcgt cggcgaagat
       61 ggtccaccat gtccctttag ggatggcgtc tttcggatca gcggcgcgcc acggcgcctg
      121 ctctctccag gcaggcgcaa cgggcgccgc cggacgccgg taattcggcc caacgacgca
      181 acctgtgaga aggatgagga gagaggttgt ggaggcaagg cgcaggagcg tgcgtctcac
      241 gattgcggtt gtcctccaga cttgacgttc acctgctggc catccgcaag cgaatcggct
      301 ggattgacga tgatctggtc actgggatcg aggccgccca gaatttccac tttattgccg
      361 tagtcgcgcc cgattgtgat tggcttcaga cgaacttttc cgtttgcatc cactacacca
      421 acccgagggc cttcggcacg aaacagaact gtgtttaccg gaacggagag tcgcacgtgc
      481 tgaaccggga cggcaaaatg gacctgcgcg taggcgccgg gcatgaggcg gttgttcggg
      541 ttgggaacgt cgacttcagt gttcagcgtg cgggtggcag gatcgatcac gtccgcggtg
      601 cggacgactt ttccattgat cttttggccg ggaaattcct gaacctcaag gtatgccggc
      661 atatcgcgct tgatggaagc tgcattggcc tgaggaacac tcacgtagac gcgcagagga
      721 tccagttggg cgatatcaaa caattcgcgg ttctgtccgg tgctgccggc gttgatgagg
      781 gcgcccacgt caacattgcg ctttgtcagc acgccagaaa aaggcgcgta gatccgcttg
      841 aaggattcca actgttcaag tcgctttacg tttgcgttgg cagcagcaag gttcgcctgt
      901 gcctgagtgt aggcgctggc ctgctgatca gcttcctgct gggagacgga atcactcttg
      961 cggagattgg cccagcggtc ggcggtgctc ttggccagct gaagctgcgc ttcaatctgc
     1021 tggcgcgtgg ccttcgcctg cgccagctcc tggtcaattt ccggcgtctc gatttcggcg
     1081 agcaggtcgc ctttctttac ctgacttcca atgtccttgt accagcgctg cagataaccg
     1141 ttggtgcggg aatagatcgc ggactcaaca taggcctgca actgtgccgg cagagtgagc
     1201 tgttcgtcac ccggttccgc aattggcttg atcacgttga ccgtgggaat tgcgagccgt
     1261 tcggtttcac gcgcgagcac tttacggtca gaaagccggt gggcgatggt tacagcgcca
     1321 gcgatgatca ggatggcgag aatgagcaac gcaaaccgtc ccggacgaga gcccgtggga
     1381 cttgtggagc cggtggagcc cgtgaccggc gctttggttt gcggtttggg ttgctcagct
     1441 agttgtgtca tccgttgtaa tctcccaagc tgcccgccgg aacaagttcc tggaccggtt
     1501 catgctcctt cttttcacga tgaaggatac tgaagattac gggcacaaaa aacaaagttg
     1561 ccaccgtggc aaagatcaga ccgccaatta cggcgcgccc caggggcgca ttctgctcgc
     1621 cgccttcccc gaagccgagc gccatgggca ccatgccgat gatcatggcg agagcggtca
     1681 tgatcacagg ccgcatacgc gtgtagccgg cttccatggc ggcatccaga gcattcagcc
     1741 cttccgccat gcgctcacgg gcgaagctga tcaccagaat actgttcgcc gtggccacgc
     1801 ccatacacat gaccgcaccg gtgagtgaag gcacgttgag agtagtatgg gtgagcagca
     1861 gaatccagac gattccggcc agagcaccag gaagggcggt gatgatgatg aacggatcaa
     1921 gccatgattg aaagttcacc acgatcagca aatagacaag cacgatagac atgatcagcc
     1981 cgataccgag gccgacgaac gagctggaca tgctttccat ctggccgcgg gctacgagtt
     2041 gcgtgccgcg gggaagcttc ttctgaaatt cggcaactat gcggcgggta tcgcgcgcaa
     2101 ccccgcccag atcgcgatcc tgtacgctgg cgtaaacgtc aaaaaccggc tggatgttgt
     2161 aatgcgagat gacggccggc gttactgaag gattcagagt ggccaggttg gagagcacct
     2221 gcggggccgg agcgccgggc gcggcgatgg gcgtattcat caaggcctga agcgaatcaa
     2281 ttcggtattc aggactctgt acggcgacgc tgtaggttac gccattctca gggttgagcc
     2341 agaaggtggg agaggtctgg aagctgccgc tgagcgagac gagcaggttc tgcgcaacgt
     2401 cgcgctgctg gagtcccacc tgctgcgcct tgctgcggtc aacattcagc cgcagtgccg
     2461 gcgaattcat gagctgctgg acgtgaacgt cagcggctcc gggcacatgg cgcagagcat
     2521 tcgcgagatc ctgggcgatt tggtagtttt tgacgtggtc cttgccaatg acctgcaggt
     2581 cgattgggga gggcaagccg aaattgagaa tctggcttac gatgtctgcc ggctggaaaa
     2641 aaaattcaac cccaggaaac tgccgcggca gttcgtcgcg aagctgcttc acgtattgcg
     2701 ccgtaggacg gtgatgctcc tggttcagcg aaaacaggat ttctgcatca gaggttccaa
     2761 ccgtcccggc cgtgctgtac gtgttgttga tggaactgta gggaaggccc aggttgtcga
     2821 ggaccgtaac cagttcttct ttggggattc gactgcgaat gtagttttcc acctcatcgc
     2881 aaaggcgggc ggtctcttca atgcgcagcc cggcgcgccc gcgaacgtgc aggcggaaga
     2941 taccggcatc cacctcgggg aagaagtcct cgccgaggaa gaagaccagt cccatagata
     3001 gaatgcagaa ccccagaaaa gcagtggcga acagagcgcg atgctccatg gcatgcttca
     3061 gcgcgcgatt gtagccttcc cggagctgtt caaagcggcg ctcaaaacca atctgtaacc
     3121 gcttgaaagg cgctgagaag ccacgcccta ccttgaactt gtcttcatgc tcatgaccgc
     3181 gtagcaggta gagaacgagc gtaggcacca gagttcgcga gagcaggtat gaagcgagca
     3241 tcgcgaagac cacagcctct gccagcggca caaaaaggaa gcgcgccacg ccggtgagga
     3301 agaacatcgg cacaaagaca atacagatgc agagcgtgga aacgaacgcc ggaacagcaa
     3361 tctgcgaagc accgtccaga atcgcctggc ggagttcctt cccctgcgcc aggttgcgat
     3421 cgatgttttc tatctctacc gtcgcgtcat cgacaaggat gccgaccgcg agcgccagcc
     3481 ctcccaaggt catgatgttg aaagtctcgc ccagcgcact cagtgtgatc acggagcaga
     3541 gaatcgagag aggaatggag atagcgataa tcagcgtgct gcgccagttc ccgaggaaca
     3601 gaaggatcat tgctccggtg aggcaggctg cagtcagacc ttcccgcaat actccgtcaa
     3661 tggaggcgcg tacgaaaagg gactgatcga agagcgtgcg catctccagg tcttctggca
     3721 gagtggtggc aacgcgcttg agaatgtcct ttacgttgct cacgatgtcg agcgtagagg
     3781 cattcccatt tttcatgatc gtgatcaggg tgccgcgcac gccgtcctgg cgaacgatgt
     3841 tcgtctgcgg agagaaccca tcgcgtacat gggcaacttc ccgcagataa gtggtgcttc
     3901 cattggtggt ttttaccggc agatcgttca ggcccgccac ggagctggga ctgccattca
     3961 tctggacttg atactgcaag tcgccgatct tggcagtgcc ggctggcaga atgaggttct
     4021 gcgcgctcac cgcgttcacg atgtcgacag gcgtcagccc cttcgcctgc agcgcgggta
     4081 tatcaagatc taccgcgatc acgcgctgct taccgccgta agggtaagga attgcggcgc
     4141 cgggaatcgt ggtcagctgc ggacggatga agttgacgga atagtcaaac agcgcctgct
     4201 ccggcatctt cttgctgcta atgcctacct gaacaatcgg cacgctggaa gcggtgtaaa
     4261 cgatgatgag cggagggttg gtcccctggg gcaggctgcg gagcgcggtc tgggagatgg
     4321 ctgtcacctg tgacagcgcc gtctgaaggt ttgcgccctg atgaaaaaac accttggtga
     4381 tggcacggcc atccatggcc tgcgtttccg tgtgctcaat gtcattcacc gtggtggtaa
     4441 ggccgcgttc ggtgttgctg acgatgcggt ccgtcatctc ttgggcggac atgccattga
     4501 actgccagat gatgctgatg accggaatgt tgatgtcagg aaaaatgtct acgggcgtcc
     4561 gcattaccac aatggggctg aggatgagaa tcagcagcgc catcacgacg aatgtaaagg
     4621 ggcgatttaa cgccagccgg acgatccaca tcggttcagt taccctcgga gcagtttagg
     4681 gaaccggcac aagagcgtcg ggcggaggac ccaggttccc atctctatgg ccggagcagc
     4741 ctgccgccgc tgcacggagc agcactgcac gttctgactc ccagcagcag gcaaaggatt
     4801 caataatcaa tattgtagcg ccattcccca gacttccagc cgtgcttgga gaggctttaa
     4861 cacttcttta ccccttcgcc gccagactgt gatcagaatc gcgtgcaggg gctcagcttt
     4921 ggccgtaaac aggaatggca gccccgtgaa cgacggcggc gtccgggctg cacaggaaca
     4981 gaatcacgcg ggcgatctcc tccggttttg gccatttggt gaaatcggcg ccgggcatgg
     5041 ctttacgatt cgcctcagta t
//
LOCUS       DASQYP010000031         4170 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_1068, whole genome shotgun sequence.
ACCESSION   DASQYP010000031 DASQYP010000000
VERSION     DASQYP010000031.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 4170)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4170)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4170
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1068"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..197
                     /locus_tag="VE783_00875"
     CDS             <1..197
                     /locus_tag="VE783_00875"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX51973.1"
                     /translation="GELRIHPLTSRDEHAELQRVLHKSRQEGFKEIADEEQSTLLVEY
                     SISGMGTTVDLDKRIAWRIG"
     gene            245..376
                     /locus_tag="VE783_00880"
     CDS             245..376
                     /locus_tag="VE783_00880"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX51974.1"
                     /translation="MGSGTMEVCCFVVDFEGAKAVIEADLAGTNFSNYTRIYDENED"
     gene            complement(389..1225)
                     /locus_tag="VE783_00885"
     CDS             complement(389..1225)
                     /locus_tag="VE783_00885"
                     /EC_number="4.2.1.75"
                     /inference="COORDINATES: protein motif:HMM:NF014641.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004852 - uroporphyrinogen-III synthase
                     activity [Evidence IEA];
                     GO_process: GO:0006780 - uroporphyrinogen III biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0006782 - protoporphyrinogen IX
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen-III synthase"
                     /protein_id="HYX51975.1"
                     /translation="MSPDPAAIDLATKPLTGWRILTTRASKQSGGLSQPLRDLGAEVI
                     EIPTIEIRPPENYEPLDSALKKIAHYDWLILTSVNGVKAVFERLTKLGLPASALRHLQ
                     IAAIGPATQKAIEEHGLEVAVTPEKYIAESVVEALRGKTEGKRVLLARAKVARDVLPN
                     DLSKAGVQLDVVEAYETVIPADAQSKLQKVFASTAERPHIVAFTSSSTASNFLSLLGP
                     DSQNILKNVTLASIGPVTSDTLRAAGFPPTVEAGEYTMHGLVSAIAAYVQSITAEQGK
                     RH"
     gene            complement(1222..2157)
                     /gene="hemC"
                     /locus_tag="VE783_00890"
     CDS             complement(1222..2157)
                     /gene="hemC"
                     /locus_tag="VE783_00890"
                     /EC_number="2.5.1.61"
                     /inference="COORDINATES: protein motif:HMM:TIGR00212.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004418 - hydroxymethylbilane synthase
                     activity [Evidence IEA];
                     GO_process: GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxymethylbilane synthase"
                     /protein_id="HYX51976.1"
                     /translation="MANLRIGSRGSQLALWQANYVASLLRDQGHQVELEIIKTTGDKI
                     LDVALAKVGTKGMFTKEIEEALAARRVDLAVHSLKDVPTELDPQFTLAAIMKREDPRD
                     AFISVKYSSLDELPRGAKVGTSSLRRQCQLKTVRPDLEIFPLRGNVDTRLRKLETGDY
                     DAIILAAAGVKRLGLDKHVKSRISVDVMCSAVGQGALAIEARANDAQVLPYLEFLNDP
                     DTRLAVLCERAVLGSMGGGCQVPIGAFAEVQSGAIMLRAMVGRPDGSEVLRETAQGTD
                     AEKLGRETAEKLLRRGGTKILEDVYQQGVAVPSQP"
     gene            complement(2157..3431)
                     /gene="hemA"
                     /locus_tag="VE783_00895"
     CDS             complement(2157..3431)
                     /gene="hemA"
                     /locus_tag="VE783_00895"
                     /EC_number="1.2.1.70"
                     /inference="COORDINATES: protein motif:HMM:TIGR01035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0008883 - glutamyl-tRNA reductase activity
                     [Evidence IEA];
                     GO_process: GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamyl-tRNA reductase"
                     /protein_id="HYX51977.1"
                     /translation="MKFQLIGVNHNSAPLDIRERLAVPEPKLPEAIGALVKQPGVEEG
                     MLLCTCNRVEVLTSTKETTDLRPFLHNYFGLAPDAIQPHLYEFQQRDAVRHVFRVASS
                     LDSMVVGEPQILGQVKEAYAVARGLGAVHSALEALLSRAFAVAKKVRSETAIGSSSVS
                     IASVAVQLAEKIFGSLEGKTVYLIGAGKMAELAARHLIGHGAGKIIISNRTHERALQM
                     AEGFGGEAVPFNEMYHAASHADIILTSTGAQDPLFRREHAEKLLKGRRNQPVFFIDIA
                     VPRNVDPEINKLDGVFLYDVDDLQSVASSNSAERKKEAARAEQIIEMEVDRFSQRMKS
                     LEVVPTIVSLQEYCETIRQAEVDRIRGKLGTITPEQEAAIEGMTRGIINKLLHTPITT
                     LKSTAAHPEAETIHEMIRRIFNLNNLNGKPRG"
     gene            complement(3428..>4170)
                     /gene="ccsA"
                     /locus_tag="VE783_00900"
     CDS             complement(3428..>4170)
                     /gene="ccsA"
                     /locus_tag="VE783_00900"
                     /inference="COORDINATES: protein motif:HMM:NF013725.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_process: GO:0017004 - cytochrome complex assembly
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="cytochrome c biogenesis protein CcsA"
                     /protein_id="HYX51978.1"
                     /translation="GRDILTRVTIPAVALGMNFHFVALIENAMLSGVWAPASMHEMES
                     LLAFVLMVFFFVVYARYRTTSPGIAVFPLAFLLTLSAGSGPTSTDMSTPLFVSRQWIY
                     IHVSLIFIGYSALVFTFVASILYLMQERTLKKKNPKGIWSRLPALAVIDDIGYKSLLW
                     GFPFMTLGLISGAIVAEARVGSQYFLDAKIALSVLSWVLYMILLYTRWSAGWRGRRAA
                     YLATFAFATAVLAWAANSLSRTHRFIAP"
BASE COUNT          845 a         1170 c         1299 g          856 t
ORIGIN      
        1 gcggcgagtt acgaattcac ccgctcacgt cccgtgacga acacgccgaa cttcagagag
       61 tccttcacaa gtcgcggcag gaaggcttca aagagatcgc ggatgaagaa caaagtacac
      121 tgctggtgga atattcaatc agtggcatgg gcacaacagt cgacctcgac aagagaattg
      181 cttggagaat cggctaaacg acattcttgg atggactggg ctcggccatt gtgatggcgg
      241 gagcatgggc tctggaacga tggaagtttg ctgcttcgtc gtcgattttg agggcgcaaa
      301 agcagttatt gaagctgacc ttgccggcac gaacttctca aattacacgc gcatctacga
      361 tgagaatgag gattgaattg ctcggtagct agtgcctctt gccctgttcc gcggtaatgc
      421 tctgaacata ggccgcaatg gctgatacca gtccgtgcat cgtgtactcg ccggcttcaa
      481 cggtgggcgg aaagcccgcg gcccgcaaag tatcgctggt gaccgggcca atagaagcca
      541 gcgtgacgtt tttgagaatg ttttgactgt ctggtccgag cagcgagaga aaattgcttg
      601 ccgtagatga gctggtgaaa gcgacgatgt gtggccgctc ggcggtggag gcaaatacct
      661 tctgtagctt cgattgtgca tccgcgggaa tcacggtttc gtaggcttcc accacatcga
      721 gttgaacgcc ggctttgctg agatcgttgg gcaacacatc gcgggcgact ttggcgcggg
      781 ccaggagcac gcgcttccct tccgtcttgc cgcgcaatgc ttcgactacg gattcagcga
      841 tatatttctc cggcgtgact gcgacttcca gaccgtgctc ttcaatggcc ttctgcgtgg
      901 ccggcccgat ggcggcgatc tgaaggtggc ggagagcact cgctggtaaa cccagcttcg
      961 tcaagcgctc aaacactgct ttcacgccat tcacgctggt gagaatcagc cagtcgtaat
     1021 gcgcgatctt cttcagcgca gaatcgagcg gctcgtaatt ttcgggtgga cggatttcga
     1081 tggtgggaat ttcgattact tcggcgccca ggtcacgcaa aggctgagag agcccaccgg
     1141 actgcttgct ggcgcgtgtg gtgaggatgc gccagccggt cagaggcttg gtggctaggt
     1201 caattgcggc cgggtccggg ctcatggctg gctcgggacg gcgacgccct gctggtagac
     1261 gtcttccagg atctttgtgc cgccgcggcg tagcagtttt tctgcggttt cgcggccgag
     1321 tttctcggca tcagttccct gcgcggtctc gcgcaaaact tcgctgccgt cgggacgccc
     1381 gaccatggcg cgcagcataa tcgcgccgct ctgtacttca gcaaaagcgc cgatgggaac
     1441 ctggcagccg ccgcccatgc tgcccaaaac agcccgctcg cagagcacgg ctaagcgagt
     1501 atccggatca ttcagaaatt caaggtaggg cagcacctgc gcgtcattgg cgcgcgcttc
     1561 aatagccaat gctccctggc ctacggcgga gcacatcacg tccacagaaa tgcgcgactt
     1621 tacgtgcttg tcgagaccca ggcgctttac gccggccgcg gcaaggatga tggcgtcgta
     1681 gtcaccggtt tcgagctttc gcaggcgggt gtcgacattg ccgcgcagcg gaaaaatttc
     1741 cagatcaggg cggacggttt tcaactggca ctgccgccgc aggctgctgg tgcccacctt
     1801 cgcgccgcgc gggagttcgt ccagcgaaga atacttgacg gagatgaacg catcacgcgg
     1861 atcttcgcgc ttcatgatgg ccgcgagcgt gaactgggga tcaagttcag tggggacgtc
     1921 tttcaggctg tgcactgcca gatcgacgcg gcgggcagcc agggcttcct cgatctcctt
     1981 ggtgaacatg cccttggtgc caactttagc gagcgcgaca tcgagaattt tgtcccccgt
     2041 ggttttgata atctcgagtt ccacctggtg accctgatcg cgcagcaatg acgccacgta
     2101 attggcctgc catagcgcca gttgggaacc acgcgaaccg atccgtagat ttgccattag
     2161 cccctgggct ttccgttgag attgttgagg ttgaaaatgc gccggatcat ttcgtgaatg
     2221 gtctcggctt caggatgtgc ggccgtggac ttgagcgtgg tgatgggggt gtgcagcagc
     2281 ttgttgatga tgccgcgggt catgccctca atcgccgctt cctgctccgg agtgattgtt
     2341 cccagcttgc cacggatgcg gtccacctca gcctgccgga ttgtctcgca gtattcctgc
     2401 agcgagacga tggtcggcac cacctccagc gacttcatgc gctgcgaaaa gcggtcaacc
     2461 tccatctcaa tgatctgctc ggcccgagcc gcttccttct tgcgctcggc gctgttgctg
     2521 ctggccacgg actggagatc gtccacgtca tagaggaaga cgccgtccag cttgttgatt
     2581 tcggggtcga cattgcgcgg cacggcgata tcaatgaaga acaccggctg gttgcggcgg
     2641 cctttgagta gcttttcggc gtgctcgcgc cggaacagcg ggtcttgcgc tccggtagaa
     2701 gtcaggatga tatcggcgtg gctggccgcg tggtacatct cattgaacgg cacggcctcg
     2761 ccgccgaaac cttccgccat ctgcagcgcg cgctcatggg tgcggttgct gatgatgatc
     2821 ttgccagcac catggccgat caggtggcgc gctgccagtt cggccatctt gcctgcgccg
     2881 atcaggtaaa ccgtcttgcc ttcgagcgag ccgaagatct tttccgcgag ttgtacggcg
     2941 actgaggcga tggaaacact ggaactgcca atcgccgtct cagaacgaac ctttttggcc
     3001 accgcgaagg cgcgtgagag cagcgcttcc agcgcggaat gcaccgcgcc aaggccgcga
     3061 gcaacagcgt aggcttcctt gacctgcccg agaatctgag gttcgccgac caccatggag
     3121 tcgaggctgg aagccacgcg gaagacgtgg cgcacggcgt cacgctgctg gaattcgtaa
     3181 aggtgaggct gaattgcgtc cggggccagg ccaaagtagt tgtgcagaaa gggacgaagg
     3241 tccgtggttt ctttggtgct ggtaagaact tccacacggt tgcaggtaca gagcagcatg
     3301 ccctcttcca cgccgggctg cttcaccaga gcgccgatcg cctccggcag tttaggttcg
     3361 gggaccgcca ggcgctcgcg aatatccagc ggagcgctgt tgtggtttac gccgatgagc
     3421 tgaaacttca tggggcgata aacctgtggg tgcggctcag gctgttggca gcccaggcca
     3481 gcacggcggt agcaaacgcg aacgtggcaa gataggcggc gcggcggcca cgccagccgg
     3541 cgctccatct ggtatagagc aggatcatgt acaggaccca gctcaggacg gagagagcga
     3601 tcttggcatc aaggaagtac tgcgacccaa cgcgggcttc agcaacaatg gcgccggaga
     3661 tcagtcccag cgtcatgaag gggaatcccc agagcagtga cttgtaacca atatcgtcaa
     3721 tcacggccag cgcgggcagg cggctccaga tgcccttcgg gttcttcttc ttgagtgtcc
     3781 gctcctgcat caggtagaga atgctggcga cgaaggtaaa caccagcgcc gagtagccga
     3841 tgaagatcag gctgacgtgg atgtaaatcc actggcggct cacgaagagc ggagtggaca
     3901 tatcggtgga tgtgggtccc gatccggcgg agagcgtcaa caggaaagcg agcgggaaaa
     3961 ctgcgatgcc cggcgaggtg gttctgtaac gcgcataaac cacaaaaaag aagaccatca
     4021 gcacgaacgc cagaagcgat tccatttcgt gcatggaagc aggggcccac accccgctga
     4081 gcatggcgtt ttcaatcaac gccacaaaat ggaaattcat gcccagggcg accgccggga
     4141 tggtgacgcg tgtcaagatg tcgcgtccgc
//
LOCUS       DASQYP010000032         7893 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_65541, whole genome shotgun sequence.
ACCESSION   DASQYP010000032 DASQYP010000000
VERSION     DASQYP010000032.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 7893)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7893)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7893
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_65541"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1336)
                     /locus_tag="VE783_00905"
     CDS             complement(<1..1336)
                     /locus_tag="VE783_00905"
                     /inference="COORDINATES: protein motif:HMM:NF025006.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015267 - channel activity [Evidence IEA];
                     GO_process: GO:0015891 - siderophore transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HYX51979.1"
                     /translation="MLVLVLGASLAAQTFRGGIQGTVTDSSGAVVADAEINVVNPATG
                     FSRTTKTDGTGNYFLSELPLGSYDVQVKAKGFRPASVKAVKVEVSASQQVNVQLAPGD
                     VAETVVVTEQAPLVETAQDNLGGNIEAQQIQELPVSGRDFTKLLVMVPGSGGDPSGVA
                     DSPGSFGLFSINGNRGRSNNYLIDGTDMNDGYRNLPAINQGGVFGTPATILPMDALEV
                     VSITNSTQAEYGRSSGGTVNIVTKSGTNAVHGSVYEYFRNDALDARNFFNTKELGPQN
                     QFHNNQFGFSAGGPLKKDTAFWFVSYEGQREHVGIPTVATVPTAADIAAATADNGGVV
                     NPVIAALLARNPWPAPNGPGGTLVTSDRANNRVDSVIAKVDYRFSEKNNITGRYYFGD
                     SDQSFPLALVGGGILPGFNTVTPTSVNILSISDTHMFSPTLLMEVRFGYNRFH"
     gene            1719..3113
                     /locus_tag="VE783_00910"
     CDS             1719..3113
                     /locus_tag="VE783_00910"
                     /inference="COORDINATES: protein motif:HMM:NF016830.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015288 - porin activity [Evidence IEA];
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate porin"
                     /protein_id="HYX51980.1"
                     /translation="MLLSPTWPGNLNRHAMPALALALLLSGLAGAQDQADQEKTEDVT
                     VFRHPDSHYWLSGQVNFIFQAHGDFPALYSGENSLRNTGEHAASRVLTLYTGVRLGSD
                     AEFQFDVESTGGRGISDALGLAGFTNVDVVRNPSLGASPYVARVMWHQTFALSHRMTD
                     QTRTPFALASKVPEERIEIRVGKLSAADFFDVNSVGSDSHLQFTNWTIVNNGGYDYAA
                     DTRGYTYGVIVEYQRAAFGVRFGELLMPKVANGIDLDWDLRRAHSENIEVEFRPKLME
                     KKSTVLRWLNYWNTANMGDYREAINAFLAGTDPQPDIEAHRHQGTLKYGFGFNGEQEL
                     GGNFRAFLRVGWNEGQHESFAYTEVNNTVSFGFDLSGDRWQRKLDKVGSAFVSNGLSI
                     DHAEYLQLGGLGFLLGDGNLHYGRETIWESYYTAHLWRGVFVAGQLQFVNNPGYNQDR
                     GPATVSGLRLHVEL"
     gene            3116..4396
                     /locus_tag="VE783_00915"
     CDS             3116..4396
                     /locus_tag="VE783_00915"
                     /inference="COORDINATES: protein motif:HMM:NF013715.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Nramp family divalent metal transporter"
                     /protein_id="HYX51981.1"
                     /translation="MTAQPTTRTGLRKQSPVALFRMRFLAFIAVLGPGFITANVDNDP
                     GGILIYSQAGAKFGYSLLWTLIPTTIALIVVQEMAARMGAITGKGLSDLIREEFGLRA
                     TFFTMLVLGIADLGNIAAEFAGMASATGIFAISKYIVVPIGAVLVWVVVVQGSYKFVE
                     RILLLFSLIYFAYLGSAVLAHPDWRAAVTQTFVPHVAKSSDYLIMIIGLVGTTITPWM
                     QFYLQASIAEKGIGPREYGLSRWDVIVGCIVTDVVAFFIVVACAATLYVSGTHDIADA
                     SDAAKALVPLVGRFAGALFAVGLLNAALLSAAILPLATSYNICEGLGFESGLDKKFSE
                     APVFYWLYTALIVIGAGFVLTPGLPLIKVILFSQVANGILIPFVLFYMLKLVNRQELM
                     GRYKNSRLANAIAGATSVIMVLLTAALVWTSLSG"
     gene            complement(5056..6618)
                     /locus_tag="VE783_00920"
     CDS             complement(5056..6618)
                     /locus_tag="VE783_00920"
                     /inference="COORDINATES: protein motif:HMM:TIGR00711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_process: GO:0006855 - xenobiotic transmembrane
                     transport [Evidence IEA];
                     GO_process: GO:0009410 - response to xenobiotic stimulus
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DHA2 family efflux MFS transporter permease
                     subunit"
                     /protein_id="HYX51982.1"
                     /translation="MESPNQPVINPWIVAISVMLGTFMEVLDTTVVNVSLPHIAGNLS
                     ASTDEATWVLTSYLVSNAIVLPLTGWLANHFGRRNVLLVSVGGFTVFSFLCGLAPNLP
                     ALIIFRILQGATGGGLQPLSQAILMEAFPPAQRGKAMAFWALGIVVAPMLGPVLGGWI
                     TDSYSWRWLFYINIPVGIAAVAMALLFIHDPPYIKRGEGGVDYWGIGFLALGIGCLQV
                     MLDKGQEEDWFASHFIVWLFVLCVAGFIFFVFRELITRDPVVHLSVFRVRTYSTGVFL
                     MTVLGFVLYGSTVLLPLWLQTLMGYSALQAGIAMLPRGLGSFLFMPIVGILMGKIEPR
                     KLLGTGLIVAGYSLYALSRLNLNAGYWDIFWPQLIQGMSMGLLFVPLTTITNDPIPKE
                     EMGNATSLFNLMRNIGASIGIASVTTIFARQNQRHVNDLGAHVTQFDETARRMLQNIQ
                     GAIMSGGGDAPTALKKAYAAVFGMVQQQAAMMSYIDVFFILAVMFIACLPLIFLMKKP
                     GKRGGGPESMAH"
     gene            complement(6683..>7893)
                     /locus_tag="VE783_00925"
     CDS             complement(6683..>7893)
                     /locus_tag="VE783_00925"
                     /inference="COORDINATES: protein motif:HMM:NF027890.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="HlyD family secretion protein"
                     /protein_id="HYX51983.1"
                     /translation="RPQRVEDDREEQPSGERRGLRERRAGFFREHPNAKWVMLLVLLA
                     LIAGAIFVWHYYSVRESTDDAQVDGHINPISARVGGTVLKVYYDDNQVVQAGALLVEL
                     DPKDYELALARAKADLVNAEANSTAAHVGIPLTTTTSSSQLVAADAAVRAADREVQAS
                     QARVQEAQANYTKLAADLKRMETLVAKDEVSRQQYDAAVAGAAAARATLEAANSNVAS
                     AEGRAAQARAQADAAHTVPEQIQVTRAKAGAAAADVDRYRAAVQMAELNLQYTKVYAP
                     VNGVLGKRSVEPGQVIQPGQPLFSIVNLDDLWVTANFKETQLKAMHPGQKVEISIDAY
                     GHTVSGTVESIGGATGARYSLLPPENATGNYVKVVQRIPVRIRIDRGQDPNHQLRPGM
                     SVVPTVFIGS"
BASE COUNT         1681 a         2233 c         2281 g         1698 t
ORIGIN      
        1 catgaaagcg gttatagccg aagcgcactt ccatgagcag cgtagggctg aacatgtggg
       61 tgtccgatat ggacagaata ttcacgctgg ttggagtgac cgtattgaaa ccgggcagga
      121 taccgccgcc cacaagcgcc agcgggaagc tctggtcgct gtcgccaaaa taataacggc
      181 cagtgatgtt gttcttttcg ctgaaacggt aatccacctt ggcaatcaca ctatccacgc
      241 gattgttggc ccggtccgag gtgacaagcg ttcctcccgg cccgtttggc gccggccacg
      301 ggttccgcgc cagcagagct gcaatcaccg gattcaccac gccgccatta tccgccgtgg
      361 ccgcggcgat atctgcggct gtgggcacag tggcgactgt aggtatgccc acgtgctcgc
      421 gctgtccttc atacgaaaca aaccagaacg ccgtgtcttt tttcagtggg cctccagccg
      481 agaaaccaaa ttgattgttg tgaaattggt tctgggggcc gagttctttg gtattgaaga
      541 aattccgagc atccagcgca tcgttgcgga agtactcgta gaccgagccg tggacggcgt
      601 tggtccctga cttggtgaca atgttcaccg ttccgccgga gctgcggccg tattcagcct
      661 gagtgctgtt ggtgatggaa accacctcca gagcgtccat cggcaggatc gttgccggcg
      721 tgccgaacac tccaccctgg ttgattgccg gcagattgcg atacccgtca ttcatgtcag
      781 tgccgtcaat caggtagttg ttggaacggc cgcgattccc gttgatgctg aagagtccaa
      841 aagagccggg agagtccgcc acaccggaag gatcgccgcc cgagccggga accataacaa
      901 gaagcttggt aaaatcgcgg ccactcacgg gcagttcctg aatctgctgc gcctcaatgt
      961 tcccgcccag gttgtcctgc gccgtttcca cgagtggcgc ctgctcggta accaccactg
     1021 tttccgcaac gtcacccggc gcgagctgaa cgtttacctg ctggctggca gagacttcta
     1081 ccttgaccgc tttgacgctc gctggccgga agcctttggc cttcacctgc acgtcatatg
     1141 acccgagcgg cagttcggag aggaagtaat tgccggtgcc atcggttttg gtggtgcgcg
     1201 aaaaaccggt cgccggattg acgacattga tctcggcgtc ggcgactaca gcgcctgagc
     1261 tgtctgtaac tgttccctga attccgcccc ggaaggtctg ggcagcaagt gaggccccaa
     1321 gaacaagaac gagcattgcg gaactgaaaa tcctcatcgt cgttacgtcc tgaagttgaa
     1381 ttgtcttaaa tttctggcta gggattatac cgcccggagt tgctgccgga aaaaagttaa
     1441 gctcgcgtga agggcggtga atttcccgtt caggttgtcc ggtttcgcga acggctgtta
     1501 gactcggaag gttgtgacca ggcaaacgga acccccgagt tgtaaatatt tctgcgccgt
     1561 ggcgcggctc ttctaaaggc ccgctgttca cggcgacgac gctgtgaact gagcggggct
     1621 tgccaattta agctcccttc tttgaccggc aacatgccgc agcccgtgca catcctttgt
     1681 gcccgagctc aaaagagtgt gtgccaggag agctgtgagt gttgttgagc cccacatggc
     1741 cgggaaacct gaatcgccac gcgatgccag cgctcgcatt ggcactgctg ctctccggat
     1801 tagcgggcgc gcaggaccag gcggaccagg agaagaccga ggatgtcaca gtgttccgcc
     1861 atcccgattc ccactactgg ctctccggcc aggtgaactt catcttccag gcacatggtg
     1921 acttccctgc tctgtatagc ggggaaaaca gcctgcgcaa tactggtgaa catgccgctt
     1981 cgcgtgtcct gacgctgtat accggcgttc ggctgggaag cgacgcagag ttccagttcg
     2041 acgtggagag caccggcggt cgcggtatta gcgatgcgct gggtcttgcc ggattcacca
     2101 acgtggatgt ggttcgcaat ccctcgctcg gcgcttcgcc atatgtggcg cgggttatgt
     2161 ggcaccagac atttgcgctt tcccacagga tgacggacca gacgcgcacc ccgttcgcgc
     2221 tggcctccaa agtccccgaa gagcggatcg aaattcgtgt gggcaagctc agcgctgctg
     2281 atttcttcga cgtgaactca gttggcagtg acagtcatct ccagttcacc aactggacca
     2341 ttgtcaacaa cgggggatac gactatgcgg cagatacgcg cggttatacc tacggcgtca
     2401 ttgtggagta ccagcgggca gcgttcgggg tcaggttcgg cgagctgctg atgccaaaag
     2461 ttgcgaacgg aattgatctg gactgggacc tgcgcagggc gcattcggaa aacattgaag
     2521 ttgaattccg gccaaagctc atggaaaaga aatccaccgt actgcgctgg ctgaattact
     2581 ggaatacagc gaacatggga gactatcggg aggccatcaa cgcttttctt gccggcactg
     2641 atccgcagcc cgacattgaa gctcatcgcc atcagggaac gctcaagtac ggattcgggt
     2701 tcaacggcga acaggaactc ggcggcaatt ttcgcgcgtt cctgcgcgtg ggctggaatg
     2761 aggggcaaca tgagtcgttc gcatacacag aggtgaacaa caccgtcagc tttgggttcg
     2821 acttatccgg cgatcgctgg caacggaagc tggacaaagt gggatcggcc tttgtgagca
     2881 atggcctaag tattgatcat gccgaatacc tgcagctcgg cggacttgga ttcctgcttg
     2941 gtgacggcaa cctgcattac ggccgagaga cgatctggga gagttattac accgcccatc
     3001 tatggcgagg cgtcttcgtc gccggccaac tacaatttgt taacaatccg ggttacaacc
     3061 aggaccgcgg gccggcaacc gtgtcgggat tgcgcctgca cgtggagctc taagagtgac
     3121 agcccaacca acaacccgca caggactccg caagcaatcg ccggtggcgc tgtttcgtat
     3181 gcggtttctg gccttcattg ccgtgctggg gcccgggttc attactgcca atgttgataa
     3241 cgatccgggt ggcatcctta tctattctca agccggagca aagttcggat actcgctgct
     3301 ctggaccctg atcccgacga cgattgcgct catcgtggtg caggagatgg ctgcccggat
     3361 gggtgccatc actggcaagg ggctctccga cctgatccgc gaagagttcg ggctgcgcgc
     3421 taccttcttc accatgctgg tgctcggaat cgccgacctc ggcaacattg ccgcggagtt
     3481 cgccggaatg gcctcggcga ccggaatctt cgccatcagc aagtacatcg tggttccaat
     3541 cggcgcagtg ctggtatggg tggtagtggt acagggttca tacaaattcg tagagaggat
     3601 cctgcttctc ttctcgctga tttattttgc gtaccttggc tccgcggtgc tggcgcatcc
     3661 tgactggcgg gctgcggtca cgcagacctt tgttccgcac gtcgccaagt catccgacta
     3721 tctgatcatg atcattggac ttgtaggaac aaccatcacc ccctggatgc agttttatct
     3781 acaggcctct atcgcggaaa aagggattgg tccacgcgag tacggcctga gccggtggga
     3841 cgttatcgtc ggctgcattg tgaccgacgt ggtcgcgttc tttatcgtag tcgcttgcgc
     3901 cgccacgctt tatgtctccg gaacgcatga tattgcagac gcctcggatg ccgcgaaagc
     3961 cctggttccg ctcgtgggac gattcgccgg agcactgttc gccgtcgggc tgctgaatgc
     4021 agcgctgctt tctgccgcca tcctgccgct ggccacctct tacaacattt gtgaagggct
     4081 gggatttgaa tccggcctgg ataagaagtt ctcagaagcc ccggtgttct actggctgta
     4141 cacggcgctc atcgtgattg gagccggatt cgtgctcacg cccggactac ctctcatcaa
     4201 ggtgattctt ttttcccagg tcgcgaacgg catactgatc ccattcgtgt tgttttacat
     4261 gctgaaactt gtaaaccggc aggagctcat ggggcggtac aagaattccc ggctggcaaa
     4321 tgctatagcg ggcgcaacca gcgtgatcat ggtcttgctt acggctgcgt tggtttggac
     4381 aagcctctca ggctaggtct ctgatttgca atcacttcct tcgagcagga gaagtgtgat
     4441 ttatctcaca cagcttcgcc tgccatcggt gtgacattag aaagtacata tgcaattgaa
     4501 ggagggagag gcgatcacct acgtcgcaag ggtgggcacg aataattgcc gctgtggcga
     4561 gccggcgacc aggactgtga ttgtctcttc aggggatcag atcaggcaca ttcctttgtg
     4621 ctccaatcat tactcagcag catggtcgag gtctgcggaa ttacgcaagc ttgatccgct
     4681 tcatccctca atctaatcgc aatcatttca ggtacttcgt tattcgacat ttgccgtact
     4741 tggaggcatt atccacgtcg tggtggttcg gagcacaggt gtgcacccgt tccgcgatgt
     4801 aaaggagctc aggccggggt gatgcggcaa gaaacctgcc gcaagagggg caataagcct
     4861 cagtgatttt cggcgtgaca gtccttcgag caatagaatc cgggcctgac aaacgttcgg
     4921 ggatcacacc ccagtagagt tccacgggga cggggaaata tacggtccaa tgctgattcg
     4981 gcgagttttc ctgaatttat ctatccaaag gcgcgcacat cgaccgttta ttaaattgcg
     5041 ctcatttaac taagattagt gggccatgct ctcggggccg ccaccgcgct tgcctggctt
     5101 cttcatgagg aagatcagcg gcaggcaggc gatgaacatg acggccagta tgaagaaaac
     5161 atcaatgtaa gacatcatgg ccgcctgctg ctggaccatg ccaaagaccg ccgcgtaggc
     5221 cttcttcagg gcggttgggg catctcctcc accgctcatg attgctccct gtatgttctg
     5281 cagcattcgt cgcgcagttt cgtcgaattg tgtgacgtga gcgccgagat cgttaacgtg
     5341 gcgctggttc tggcgggcaa atatcgtggt cacgctggca atcccgatgc tcgcaccgat
     5401 attccgcatc aggttgaaca ggctggtggc gttgcccatc tcttccttcg gaataggatc
     5461 gtttgtgatc gtggtcagcg gcacaaacag cagccccatg gacattccct gaatgagctg
     5521 cggccagaat atgtcccaat aaccggcgtt gaggttcagc cgcgagagcg cgtacaggct
     5581 gtagcccgcg acgatcagac cagttccaag cagctttctc ggttcgatct tgcccatcag
     5641 aatgcctacg atcggcatga acaaaaatga gcccagtccg cgcggtagca tcgcgatgcc
     5701 ggcctgcaga gcggaatacc ccatgagcgt ttgcaaccag agcggcaaaa gcacggtgct
     5761 gccataaaga acgaagccga gcaccgtcat caggaacaca cccgtgctat aggtgcggac
     5821 cctgaagacg gagagatgca ccaccggatc gcgcgtgatc agttcgcgaa agacgaagaa
     5881 aataaatccc gcgacgcaga gcacgaacag ccagacaatg aagtgggagg caaaccagtc
     5941 ttcttcctgg cccttgtcca gcatcacctg cagacagcca atacccaatg caagaaaccc
     6001 aatgccccag taatccacac caccttcacc gcgcttgatg tagggcggat cgtggatgaa
     6061 gagcagcgcc atagcgactg cggcgatacc aaccgggatg ttgatgtaaa acaaccagcg
     6121 ccagctataa ctgtcagtaa tccagccacc gagcacgggg ccaagcatcg gcgcgactac
     6181 gataccgagc gcccagaagg ccatggcttt tccgcgctgc gccggtggaa aagcttccat
     6241 cagaatggcc tgcgaaagag gctgcaagcc gccgccagtt gcaccctgaa gaatgcggaa
     6301 gatgatcaat gcaggcaggt tcggcgccag tccgcagaga aatgagaaaa ctgtgaatcc
     6361 gccaaccgaa accagcagca cgttgcgccg gccaaagtgg ttcgcgagcc agccggtaag
     6421 gggcagcacg atggcattcg aaaccagata cgaggtcagc acccatgtgg cttcgtcagt
     6481 gctcgcggaa agattgccgg ctatgtgcgg caacgagacg ttcaccaccg tggtgtccag
     6541 cacctccatg aaggtgccga gcattaccga gatggcgacg atccacggat tgataacggg
     6601 ctgattgggc gattccatct gcaaatcagt gcttcaggca cacgagcggc cgcaagctgt
     6661 tcgccgggac taaacggctg tattagctgc ctatgaaaac ggtcggcaca acggacatgc
     6721 cgggtcgcaa ttgatggtta ggatcttgtc cgcgatcaat ccgaatgcgt acggggattc
     6781 gctgcacaac tttcacgtag ttgccggttg cattctccgg tggaagcaag ctgtaacgcg
     6841 cgcctgttgc cccgccaatc gattccacag tgccggaaac ggtatgtccg taggcgtcta
     6901 tggagatttc gaccttctgc ccgggatgca tcgccttaag ctgcgtctcc ttgaagttcg
     6961 cggttaccca gagatcgtca agattgacaa tggaaaacag cggctgcccg ggttgaatta
     7021 cctggcctgg ctccacgctg cgcttgccga gtacgccgtt caccggcgca tagacttttg
     7081 tgtactgaag attgagctcc gccatttgaa ctgcagcacg gtagcgatcc acgtcagcgg
     7141 cagcggcgcc ggcctttgcg cgggtcacct gaatttgttc gggaacggta tgtgccgcat
     7201 cagcctgcgc gcgggcctgg gctgcgcgtc cttccgcgct ggcaacattc gaattggcag
     7261 cttcaagggt agcgcgcgct gctgcggctc cggccacagc cgcatcatat tgctgacgcg
     7321 aaacctcatc cttcgcaacc agcgtctcca tgcgtttaag gtcagcagcc agctttgtgt
     7381 aatttgcctg ggcttcctgc acgcgagctt gcgaggcctg aacctcacga tcggcagctc
     7441 ggaccgcggc gtcggccgcg accagctggc ttgaactcgt tgtggttgta agcggaatgc
     7501 caacgtgggc agcagtggaa ttcgcttcag cattcaccag atctgccttg gcacgcgcca
     7561 gcgccagctc ataatccttg ggatcgagct ccaccagaag ggcccccgcc tggactacct
     7621 gattatcgtc gtagtaaacc ttcagcacgg ttccacccac acgcgcgctg atgggattga
     7681 tgtggccgtc cacctgtgcg tcgtcagtcg attcgcgaac agagtagtaa tgccaaacga
     7741 aaattgcccc cgcaatgagc gcgagcagga ccaacagcat cacccatttg gcattcgggt
     7801 gttcacggaa gaagccggcg cggcgctcgc gaaggccgcg gcgctcaccc gagggctgct
     7861 cttcacgatc atcttccacg cgctgaggac gct
//
LOCUS       DASQYP010000033         2173 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_276274, whole genome shotgun sequence.
ACCESSION   DASQYP010000033 DASQYP010000000
VERSION     DASQYP010000033.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 2173)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2173)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2173
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_276274"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            35..1225
                     /locus_tag="VE783_00930"
     CDS             35..1225
                     /locus_tag="VE783_00930"
                     /inference="COORDINATES: protein motif:HMM:NF042637.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6569 family protein"
                     /protein_id="HYX51984.1"
                     /translation="MKVLFWGSSAALLLLLTAAFSVPASGGETTPGLGDYKLLDPITH
                     HDLTIFPVVAARSHDTSDFITLDEGIRSGDVVVTETGNLHGGMVRRHGYQIPRGYGAQ
                     VNQLVLVNNSKHPLLLLAGEVVTGGKQDRVVAKDRIVPPESDPVDLGVFCVEPGRWIE
                     SSTKFDTHASVMVQPSVRKKAMADADQQKVWDSVNTARMGMANKLAYGDAAASPSATP
                     GTTMGGPITGMAGGSIGTTQAAPAPIRELHNTTSYAKVIENSAVKQQMDQITEPMQKQ
                     YESVIKRLKDQNAVGVVVAVKGRIVWADLFASSSLLGKYWPKLLQSYAAESLTSPGSG
                     AEPNRADAEKFLANWQARHEIVDSEPGLYRQRELVGDRFRAFELTSLISKAAFDVHLS
                     KMAE"
     gene            1406..1633
                     /locus_tag="VE783_00935"
     CDS             1406..1633
                     /locus_tag="VE783_00935"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX51985.1"
                     /translation="MGEKFTVTEVAALRNELISGGLDSFQTAELLKVFLTGRGYGVSP
                     ESALDAAGRIEGSGLNVESLHKELETIALVM"
     gene            complement(1766..2140)
                     /locus_tag="VE783_00940"
     CDS             complement(1766..2140)
                     /locus_tag="VE783_00940"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX51986.1"
                     /translation="MSDIREYDVTAASTSTFGRVLCGARNHHFIVDGPVQNGCPGEEI
                     TPAEIFLAGVACCGVELIQVLARSQEIPLKQVNVAIHGMMDRSKPVRQDVSLFNSVKL
                     HFKFAGLTDQQAGQLVSTFKGR"
BASE COUNT          485 a          576 c          652 g          460 t
ORIGIN      
        1 acaatgaagg tggctcaacc atgaggtgaa gactatgaaa gtgcttttct gggggtcgtc
       61 cgcggccctt ttgctgttgc tgaccgccgc attctctgtt cccgcttccg gaggtgaaac
      121 cacgcccggc ctgggcgact acaaactgct ggacccgatt acccatcacg atctcaccat
      181 ttttcccgtg gttgctgcac gttctcacga caccagcgac tttatcaccc tggatgaggg
      241 catccgctcc ggcgatgtgg tggtgactga aaccggcaac ctgcacggag gcatggtccg
      301 ccgccacggt taccagatac cccgcggata cggcgctcag gtgaaccagc ttgtactggt
      361 aaataactcg aaacatccgc ttttgttgct ggcaggcgaa gtagtgactg gcggcaagca
      421 ggaccgagtt gtcgccaagg accggattgt tcctccagag agcgatcctg tggatctggg
      481 cgtcttttgc gtggagcccg ggcgctggat tgaaagttca acaaagtttg atacccatgc
      541 atccgtgatg gtgcagccga gcgtgcgcaa gaaagccatg gctgacgccg accagcagaa
      601 ggtgtgggac agcgtgaata cagcgcgaat ggggatggcc aacaagctcg cgtatggcga
      661 tgccgcagcg agtcccagtg ccacgccagg aactaccatg ggtggtccga ttacaggaat
      721 ggcaggcggg tcaattggca ctacgcaagc tgcgccagct ccgatccgcg aacttcacaa
      781 cacaacttct tacgcaaagg tgattgagaa ctctgcagtc aagcagcaga tggaccagat
      841 caccgagccc atgcagaagc agtatgagag cgtgatcaag cgtttgaaag atcagaacgc
      901 cgtcggcgtg gtggtggcgg taaaaggccg gatcgtgtgg gctgatctct ttgccagcag
      961 ctctctgctg ggaaagtact ggcccaagct gttgcagtca tacgctgcgg aatcgcttac
     1021 ctctccgggc agcggcgcgg aacccaacag agccgacgcg gagaaattcc tggccaactg
     1081 gcaggcgcgg catgaaatcg tagatagtga gcccggtctg tatcgccagc gcgagctggt
     1141 gggtgaccgc tttcgcgctt tcgaattgac ttcgctgatc agcaaggccg cgtttgacgt
     1201 gcacttgagc aagatggcgg agtaaagatt tgctgagaac tgcaaagacg tgccgagttg
     1261 cgccgagggc tgttcttgcg cctgtaagtg actgtattac tttggttctg ttaccaatgt
     1321 caggcaagcc ctcatttttc ctgcaacaaa gaggtccagt tccgtgtcta atacgtacaa
     1381 caggtatatg ggtcggaggt gacctatggg agagaagttc acggtgacgg aagtggcagc
     1441 tctcaggaac gaactcatct caggtggatt ggattctttc cagactgcgg aattattgaa
     1501 agtgtttttg accggacgcg gatacggtgt atcgcctgaa tcggcgcttg atgccgcggg
     1561 ccgcattgaa ggctcaggac tgaacgttga gagcctgcac aaagaactcg agacaatcgc
     1621 tttagtgatg taaccgcatc attacccgta agaacggaaa cgcgccgggc caaccagccc
     1681 ggcatttctg tttctggagc tatccaacca gttcgtaatc cactaccact tccggggtcg
     1741 cgaccgcgac cgtgccgaag agtggtcaac gccccttgaa cgttgagaca agctggccgg
     1801 cttgctgatc ggttaagcct gcgaatttga aatgcagctt gacggagttg aagagcgaga
     1861 catcctggcg tacaggtttg gagcggtcca tcatgccatg aatggctacg ttgacctgct
     1921 tgagcgggat ctcctgcgat ctggccagta cctggataag ctccacgccg cagcaggcca
     1981 cgccggccag aaagatttcg gcgggcgtga tttcttcccc gggacagccg ttctggacgg
     2041 gcccgtcgac gatgaaatga tgattgcgcg cgccgcacag gacacgtcca aaggtgctgg
     2101 ttgacgcggc ggtgacgtca tattcgcgga tgtctgacat gagggctcct tagctcacca
     2161 ttttacggaa gca
//
LOCUS       DASQYP010000034         2044 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_297538, whole genome shotgun sequence.
ACCESSION   DASQYP010000034 DASQYP010000000
VERSION     DASQYP010000034.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 2044)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2044)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2044
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_297538"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            427..1848
                     /gene="kaiC"
                     /locus_tag="VE783_00945"
     CDS             427..1848
                     /gene="kaiC"
                     /locus_tag="VE783_00945"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF006799.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="circadian clock protein KaiC"
                     /protein_id="HYX51987.1"
                     /translation="MLEKVPTGIRGLDQVTHGGFPRGRTALICGGPGAGKTLMGMEFL
                     VRGATVFNEPGVCFAFEETSEELATNVASLGYDLPGLIRAKKLCVEYVHIERKQIEET
                     GEYDLEGLFIRLRQAIASIKAKRVLLDTIELLFMGLTNEGIVRAELRRLFHWLKDQGV
                     TAVITAEIGERTLTRYGLEEYVADCVILLDHRVNEQISTRRLRVVKYRGSAHGTNEYP
                     FLMDDKGISVIPITSLGLTHGASTERISSGVPGLDRMLGDKGFYRGSSILITGTAGTG
                     KSSYCAAFVNAACSRGERALYFAFEESPTQILRNMSSVGIDLHRWMNRKLLHIQASRP
                     TATGLEAHLAMMYKDVEEFRPSVVVVDPITNLLSVGELSSVKAMLTRVIDFLKLKSIT
                     AMFTNLVYGDDPEERAIGISSLMDSWLVLREVQHGTERIRTVNLLKSRGMAHDSRVHS
                     FALSDKGIAINGDYQTISATPTH"
BASE COUNT          488 a          581 c          561 g          414 t
ORIGIN      
        1 caagccgacc tccaacggaa ccgatttcgt tatggtttat gtaagcgccc atgacgataa
       61 agacaccatg tagtaatccc ttcactagag cgcgggcatc ctgccgcaac tctcctgcat
      121 cgtaatttcc ggcaggcgga atgcccgcga gaacagctct tcctcaatcc ctcgcccgga
      181 gcgccagctg accgctcaaa cgcggttccg tacctgaagc agactatttg gaaaaaagaa
      241 gaccatagag gtagttcgcg cgagcgtgtg cccgatcatc tcggccacgg aatgcaagca
      301 ttcaaaaacg gcgccacctg catctgacgg ctgtaatcgc cgaagaaaat gcctgaactg
      361 aacacaaaat cgcctgtcgc aagcaagacc cgtaagccgg gaaggaacgg agccggctca
      421 gagcttatgc tcgaaaaggt tccaaccgga atccgcggcc ttgaccaggt aacccacggt
      481 ggcttcccgc gcggacgcac agctctgatt tgtggcggcc cgggagccgg aaaaactttg
      541 atgggtatgg agttcctggt ccgcggagcc acggtattca atgagcccgg tgtctgcttt
      601 gcgtttgaag aaaccagtga agagctggcc accaacgtgg cgtcactcgg ttacgacctg
      661 ccgggtctca ttcgcgccaa aaagctctgc gtggaatatg tccatattga gcgcaagcag
      721 atcgaggaaa cgggcgaata cgatctggag gggctgttca tccgcctccg tcaggccatt
      781 gcatccatca aagcgaaacg cgtgctgctg gacaccatcg aactcctctt catgggcctg
      841 accaatgagg gaatcgtccg ggcagagctg cggcgtctgt tccattggct gaaagaccag
      901 ggtgtaactg cggtgatcac tgcagagatc ggagaacgca ccctgacgcg ttatggactg
      961 gaagagtacg tggccgattg cgtgatcttg ctggaccatc gcgtcaacga gcagatctcc
     1021 acccgccgtt tgcgagtagt aaagtaccgt ggatcagctc acggtaccaa cgaatatccg
     1081 ttcctcatgg atgacaaagg aatctccgtc atccccataa cttcactcgg tctcacccac
     1141 ggcgcttcca cggaaagaat ctcttccggc gtgcccggat tggaccggat gctgggcgac
     1201 aaaggtttct accgcggttc gagcatcctg atcaccggaa cagcaggtac cggcaaatcc
     1261 agctattgcg ccgctttcgt gaatgcagcc tgcagccgcg gtgaacgcgc cttgtatttc
     1321 gcatttgagg aatcccctac gcagattctg cgcaatatga gctcggtagg cattgatctg
     1381 caccgctgga tgaaccgcaa gctgctccat atccaggctt cgcgccccac ggcaacaggt
     1441 ctggaagctc accttgccat gatgtacaag gatgttgagg agttccggcc cagcgttgtg
     1501 gtggtagacc ccatcaccaa cctgctcagc gtgggagaac tctcctccgt aaaggccatg
     1561 ctcacgcggg tcatcgattt tttgaaattg aaatccatta ccgccatgtt caccaatctg
     1621 gtgtatggcg acgatcctga agaaagggca atcggcatct cctcgctcat ggatagctgg
     1681 ctggtgttgc gcgaagtgca gcatgggaca gaacggatcc gcaccgtgaa ccttttgaag
     1741 tcgcgtggca tggcccacga tagccgggtg cacagcttcg ccctgagtga taaaggaatt
     1801 gcgatcaatg gtgactacca gacaatcagc gcgaccccaa cccactaaga agaaatcggg
     1861 cagcaaagcc ggtaagaacg gagccggccg gttgaatcca gcggtttgga tactccgcct
     1921 ctatgtggcc ggaatgactc caacctccat tcgtgccttt gagaacctga agaagatctg
     1981 cgaagagcat ttgcagggcg cttacaagat cgaggtaatc gatctgctcg agcgtcccaa
     2041 actg
//
LOCUS       DASQYP010000035         2191 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_234143, whole genome shotgun sequence.
ACCESSION   DASQYP010000035 DASQYP010000000
VERSION     DASQYP010000035.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 2191)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2191)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2191
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_234143"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            166..705
                     /locus_tag="VE783_00950"
     CDS             166..705
                     /locus_tag="VE783_00950"
                     /inference="COORDINATES: protein motif:HMM:NF022853.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-disulfide reductase DsbD
                     domain-containing protein"
                     /protein_id="HYX51988.1"
                     /translation="MKKIALTVCLLLISALAAQAQLGPASRVTFEPMSTVAVRPGSHA
                     PIKFVFHIQPGFHINSNKPSAPELIPTVLHLSLPGDVVIGRMVYPAGQLMSFPFDPSQ
                     KLSVYSGDVVITGRVVAPPSAAADTYTVHGDFKYQACDANACYPPKNLPITFSVKVGA
                     AAASGRKARPNAQSPHIHN"
     gene            756..1451
                     /locus_tag="VE783_00955"
     CDS             756..1451
                     /locus_tag="VE783_00955"
                     /EC_number="2.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HYX51989.1"
                     /translation="MMGSRVPQVDDIYRLPSLHTLPHRWRVRQTISTLQSLHRHFSTY
                     ADVGCADGFVTHQIAEALKTEQTVGFELQEHVAQAGSEQYPDISFRHWNLTSEAPPTE
                     KFDLVTCMETLEHVLDLQFALKNLLAITKDTLLITVPVEIGPLGLAKFGAKVLLRRRV
                     FTGEHRGSKADYAARLLRGAPISHFRHSPEHGYWTLHTGFDYRELDAVLRDIDVCFTA
                     RNQGWNRLYVVRP"
     gene            complement(1500..>2191)
                     /locus_tag="VE783_00960"
     CDS             complement(1500..>2191)
                     /locus_tag="VE783_00960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013935707.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="carboxyl transferase domain-containing protein"
                     /protein_id="HYX51990.1"
                     /translation="EVHEHYAKNIVVGFARMNGRPVGIVANQPAFLAGVLDINASVKG
                     ARFVRFCDAFNIPLITFEDVPGFLPGTKQEYGGIIRHGAKLLFAFAEATVPKLTVITR
                     KAYGGAYCVMSSKHIRTDVNYAWPTAEIAVMGPEGAVNIVYKRELERAAAKHIESIHD
                     QGKWMEEVRKEKVEEFRERFANPYIAAERGYVDAVIQPRETRKRLIDALEMLQTKRDK
                     NPPKKHGNIPL"
BASE COUNT          456 a          677 c          580 g          478 t
ORIGIN      
        1 gctggacggg cttccctaca acttcttcat tgaccgcgat ggaaaagttg tggccagcat
       61 caagggcctg gaaagtgaat ctgtgattgt tgcggatatt gagaaggcgc tgggcgggcc
      121 gcacgaccat gaccatgaac actccgccag cgcagccacc cgctaatgaa aaaaatcgcg
      181 cttactgttt gcttactgct tatttccgcg ctggcagccc aggcgcagct tggcccggcg
      241 tcgcgcgtaa cgtttgaacc catgagcacc gtggcggtgc gtccgggaag ccacgcgccc
      301 atcaagttcg tcttccacat ccagccgggg tttcatatca attccaataa gcccagcgcg
      361 ccggagctga tccccaccgt gctgcatctc tcgctgcccg gtgacgtggt gattggccgc
      421 atggtctatc ccgccggcca gctcatgagc ttcccctttg atcccagcca gaagctgagc
      481 gtctactccg gtgacgtggt gatcaccggc cgcgtggtgg cgccgcccag cgccgccgct
      541 gatacctaca ccgtgcatgg tgattttaaa tatcaggctt gcgatgcgaa cgcctgttat
      601 ccgcctaaaa atctgccgat cactttcagc gtgaaggtgg gagctgctgc ggcgtccgga
      661 aggaaagctc gccccaacgc gcagagcccg cacatacaca attaggcaga acgcgcaaaa
      721 ccacgccgta acaggcagac atcgccagga cgggaatgat gggatcaagg gtaccgcaag
      781 tcgatgacat ttataggctg ccatcgctgc acactcttcc gcatcgctgg cgagtgcgac
      841 agactatttc tacgctgcaa tctctgcacc gccatttttc aacctatgca gatgtcggat
      901 gtgccgacgg cttcgtcacc caccagattg ccgaagcttt aaaaacagaa caaaccgtcg
      961 gtttcgaact ccaggaacat gtggcccagg cgggaagcga gcaatacccg gacatcagct
     1021 ttcggcactg gaacctcacg tctgaagctc ctcccaccga gaagtttgat ctggtcacct
     1081 gcatggaaac tctggagcac gtactcgacc ttcaatttgc gctcaaaaac ctgttagcga
     1141 tcacgaagga cacgttgctg atcacggtcc cggttgaaat cggcccgctg gggcttgcca
     1201 aattcggcgc caaagttctg ctacgcaggc gggtctttac cggtgagcac cgcggatcta
     1261 aagctgatta tgcagccaga ctgcttcgcg gcgctccaat ctcccacttc cgccactctc
     1321 ctgaacacgg ctattggacg ctgcacaccg gctttgacta tcgcgaactg gatgcggtcc
     1381 tccgcgacat agacgtctgc ttcacggccc ggaatcaagg ctggaaccgc ttgtatgtcg
     1441 tgcggccttg atcacgttcc gattttagat ggcgccgaat ctcgcgaaca cagcaaattt
     1501 tatagcggta tgttcccgtg cttcttcggc gggttcttgt cgcgcttggt ctggagcatc
     1561 tccagcgcat cgatgagccg tttgcgggtt tcacgcggct ggatcaccgc gtccacatag
     1621 ccgcgctcgg cggcgatgta cggattggca aagcgttcgc ggaactcttc cactttctct
     1681 tttcggactt cttccatcca ctttccctgg tcatggatgg attcaatgtg tttggcggcc
     1741 gcccgctcca gctcacgctt gtaaacgatg ttcactgcgc cttccggccc catcaccgcg
     1801 atctcagccg tcggccatgc gtagttcacg tccgtgcgga tatgctttga cgacataacg
     1861 cagtaggcgc cgccatacgc tttgcgcgta atcactgtaa gcttgggcac cgtggcttca
     1921 gcaaaggcaa acagcagctt ggctccgtgg cggataatcc cgccgtactc ctgctttgtt
     1981 cccggcagaa atccgggcac gtcttcaaag gtgatgagcg ggatgttgaa ggcatcgcag
     2041 aagcgaacaa accgcgcccc tttaactgac gcattgatat ccagcacgcc agccagaaat
     2101 gccggctggt tggccacaat ccctaccgga cgcccattca tccgcgcaaa tcccaccaca
     2161 atgttcttcg cgtagtgctc atgcacctca a
//
LOCUS       DASQYP010000036         6676 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_65786, whole genome shotgun sequence.
ACCESSION   DASQYP010000036 DASQYP010000000
VERSION     DASQYP010000036.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 6676)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6676)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6676
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_65786"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1005
                     /locus_tag="VE783_00965"
     CDS             <1..1005
                     /locus_tag="VE783_00965"
                     /inference="COORDINATES: protein motif:HMM:NF012652.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CpaF family protein"
                     /protein_id="HYX51991.1"
                     /translation="HRQVYVERAGMLELTNVVFKDAGHLRHIIDKIVSKVGRRVDESS
                     PMCDARLEDGSRVNVIIPPLAIDGPIMSIRRFGRTPVGVEQLLTFRSITPAMLELLKA
                     AVRARLNIVVSGGTGSGKTTLLNALSSFISERERIVTIEDSAELQLQQPHVVRLECRP
                     PNVEGKGAVRQRELVINALRMRPDRIVLGEVRGGEALDMLQAMNTGHDGSLTTIHANN
                     PRDAIARLETMSLMADVNLPDKAIRQQIASAVSIIVQVARLSDGSRRVTQISEITGVS
                     DDMVTLQDIFVFDRLGIGPNNRVLGRFRATGIRPGFAERIKVSGIQLSPNLFEHVCEV
                     "
     gene            1008..1967
                     /locus_tag="VE783_00970"
     CDS             1008..1967
                     /locus_tag="VE783_00970"
                     /inference="COORDINATES: protein motif:HMM:NF012694.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system F family protein"
                     /protein_id="HYX51992.1"
                     /translation="MTILTIFLIALIAAFAVVALIIEPSKTDKAVHARLAALDRSGLS
                     AEDGAPGIMKATTFSTIPALDRFLRTNEVAIWLHTLINQADVNWTVGQVVIVSLVLVC
                     VGALLGNWWVMGGIVGWLPGLALGTVPFLFLMQKRKLRVRRFSEQLPQAIDLMTRGLR
                     AGQALPAAIETVANESDEPLSSEFRRAADEQSFGLPFREAMLNMGRRMPVPDLQFLIT
                     AILVQKETGGNLAQILDKTSQVLRERIRIIGQMRIRTAQGRLTGGILTGLPFVIFFGL
                     NILQPGYGKVLFETPTGQKMVTYAAILMAIGILMIRRIVNVKF"
     gene            1983..2897
                     /locus_tag="VE783_00975"
     CDS             1983..2897
                     /locus_tag="VE783_00975"
                     /inference="COORDINATES: protein motif:HMM:NF012694.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system F family protein"
                     /protein_id="HYX51993.1"
                     /translation="MLLFFISATVTVFLVLAALIWLLSANDPVQERLMEISATTTAEK
                     PGSLMVGTPSTTAGQLAQQVTEFFAPIRGLLSGSDEDLAYKLTLAGFRKPEHVEIFTA
                     IKLLLPMVGAIVGTFFIGNALVAAAVGALLGFFLPDMLLSYLMTRRQTRIRLALPDAL
                     DLLVICMEAGLGVDQALVRVGEEMAVSAPDLAAEFQIITLEQRAGKARLDAWRSMANR
                     LDLEFVRQFVTMLMQTERFGTPIAHALGVFADSLRSRRMQEAEESAAKSGVKLLFPLV
                     FFIFPSIFVVSMGPAILNLQKTFQEMLK"
     gene            2900..3277
                     /locus_tag="VE783_00980"
     CDS             2900..3277
                     /locus_tag="VE783_00980"
                     /inference="COORDINATES: protein motif:HMM:NF014678.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF192 domain-containing protein"
                     /protein_id="HYX51994.1"
                     /translation="MRLNRRTVRAVNTTRGTELGTKVRVADTGLSRIVGLLGERALPE
                     GEGLLIVPSQGVHTWGMLFPIDVLILDNDWNVLAVRRNMRSFRVTRIFWKAAAVLELP
                     SGTAAATATAVGDTLSFDRTEVN"
     gene            3289..3819
                     /locus_tag="VE783_00985"
     CDS             3289..3819
                     /locus_tag="VE783_00985"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX51995.1"
                     /translation="MRLRLTFRRKEEGQSLLETAVAMPLLLGIAFNLINLGYFWFCIL
                     TMTAAPRQGVQFSAQGSSSLATATAPSTTAVSNLVLENMTNALHGATTSNTSVRVCSK
                     SKGVNAATGIALCDSFGPGFAFNAVGVDPETPAFVLNRVDVGYTVTPLISGAAFNVVL
                     PSTMNFRRQVSMRSLY"
     gene            3824..4234
                     /locus_tag="VE783_00990"
     CDS             3824..4234
                     /locus_tag="VE783_00990"
                     /inference="COORDINATES: protein motif:HMM:NF019428.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TadE/TadG family type IV pilus assembly protein"
                     /protein_id="HYX51996.1"
                     /translation="MLRRYPIRTRGQRGQSLLETAMMIVVIFTVVFWVFELGWLMYTY
                     SVMADAANEGVRYAVVHSGGDSSGAQTRVATFAATSLHDVSALSTTVTFPDGNASPPN
                     RVRVTVSYTYVPWLKGFINTPTMSTYAEGRMIVP"
     gene            4231..6198
                     /locus_tag="VE783_00995"
     CDS             4231..6198
                     /locus_tag="VE783_00995"
                     /inference="COORDINATES: protein motif:HMM:NF024792.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pilus assembly protein TadG-related protein"
                     /protein_id="HYX51997.1"
                     /translation="MKIRRHPHPYRASEHGQTMIPIFIFIGLFLLAMLGVAADYTQLW
                     AHRQMAQGAADAACQAGAADLFINAINPTAGGQNGLLPFGYIGTPFNCSTNTATAICR
                     YAALNGYTTGSNVNVTFPSSLPGVTSLPSALATAHPYLEVTITDPVAMSFTRMVGGAS
                     TVNVTAKAGCGVAPANVPIPLVILHPTSAASISVSGASLIKVFGGPQRSVQVDSSSAT
                     AASVGSVDLSQGGPSNSGSDFAVLGGPATQPGGISLGSTGHYLYPSTPFGDPFSTYNA
                     PSAPSTPGAVNPVPFGMNGCPDPNGCVEFTPGDYRSCTSSGNISPGDKGCLSLPYTGS
                     NPKFKNIPGWTAQQNFAQGAVIQPTSNNANFVFVATTGGKTGNTQPTWNIPAPNPCTL
                     QTNGTCTGSTVTDGTVTWQNVGVINLNKLSTGIFDPGLYFVGTPGLSFGDGSTARISC
                     APPFANGQCATTGDTSNGVMFYFNSSGSVSVTSSSGNGKPCTSASNNGNGSPNGCVVS
                     YKVDGSATGAALGPIRSRPLQCPQGSANLAQVPTTLDGNILLGPCSGTYASPDGNRGF
                     LFFQRTAANPRWGGGGQFLSSGFMYFHSGVGGTCGTSTSCLTLQGGSGSQSFTLGNIV
                     VDKLALGGNPQINMILNPTATFEVLRPTLLE"
     gene            6195..>6676
                     /locus_tag="VE783_01000"
     CDS             6195..>6676
                     /locus_tag="VE783_01000"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX51998.1"
                     /translation="MIVPTETTSTRLDAVNRSSASTPRIKPPRFAALPVRRATHSILL
                     SGTLHTLAMALVIWAPGHLPIPVVLEQPAEEMKAHDGKPITFEPLPPVKSLKAKSETA
                     PKATPKAANLKTSDAPPAPLKRDYAGPQEIISLVPHATNRVQTILRPDLAAPPPLKFP
                     L"
BASE COUNT         1309 a         1959 c         1948 g         1460 t
ORIGIN      
        1 caccgccagg tctacgtgga gcgggccggc atgctggaac tcaccaacgt ggtgtttaaa
       61 gacgcgggac atctccggca catcatcgat aagatcgttt ccaaagtcgg ccggcgcgtc
      121 gacgaatcat ctcccatgtg cgacgcgcga ctggaagacg gctcccgcgt gaatgtgatc
      181 atcccgcctc tggccattga tggtcccatc atgtcaatcc gccggtttgg gcggacgccc
      241 gtcggcgtcg agcagctgct cactttccgc agcatcaccc ccgccatgct ggaactattg
      301 aaggctgccg tgcgcgcgcg tctgaacatt gtggtttccg ggggaaccgg cagtggcaag
      361 acaactttgt tgaacgctct ctcaagcttc atctcagagc gggaacgcat tgttaccatc
      421 gaagattccg ccgagctcca gttgcagcag ccgcacgtgg tccgtctgga atgccgtccg
      481 ccgaacgtgg aaggcaaggg cgccgtccgg cagcgcgagt tggtcatcaa cgctcttcga
      541 atgcgtcctg atcgcattgt gctgggcgaa gtgcgcggcg gtgaagctct ggacatgctt
      601 caggccatga ataccggcca tgatggttcc ctgaccacga ttcacgcgaa caacccacgc
      661 gacgcgatcg cccgcctgga aaccatgtcg ctcatggctg atgtgaacct gccggacaag
      721 gcgattcgcc agcagattgc gtcggcggtg tcgatcatcg ttcaggtagc gcgcctgagt
      781 gacggttcgc gccgggttac ccagatttca gaaataaccg gcgtgagcga tgacatggtg
      841 acgttgcagg acatcttcgt cttcgaccgg ctgggaattg gtccgaacaa ccgcgtgctc
      901 ggtcgcttcc gggcgacggg catccggccg ggattcgcgg agcgcattaa ggtttccggg
      961 atccagcttt cgcccaatct gtttgagcat gtttgtgagg tataggcgtg acgatcctta
     1021 ccatattcct gatcgccctc atcgctgcct tcgccgtggt ggcgctgatc attgagcctt
     1081 caaagactga caaagccgtc catgcccggc tggccgccct ggatcgctct ggattgtccg
     1141 ctgaggacgg cgcgccagga atcatgaagg cgaccacgtt cagcaccatc ccggccctgg
     1201 atcggtttct gcgtaccaac gaagttgcca tttggctgca cacgctgatc aatcaagctg
     1261 acgtgaactg gaccgtagga caggtggtca tcgttagtct cgtgctggta tgcgtcggtg
     1321 ctttgctcgg taattggtgg gtcatgggcg gcatcgtcgg gtggttgccc gggttggcgc
     1381 tgggcacggt gccgttcctt tttctcatgc agaagcggaa gttaagggtg cgccggtttt
     1441 ctgaacagct tcctcaggcc atcgatctca tgacgcgggg actgcgcgcc ggacaggcac
     1501 tgccggcagc tattgaaaca gtcgccaatg agagcgatga acccttaagt tcagaattcc
     1561 ggcgcgccgc cgatgaacag agcttcggcc tccctttccg cgaagccatg ctgaacatgg
     1621 gccgccgcat gccggtgccc gatctgcaat tcctgattac cgctatcttg gtgcagaagg
     1681 agacgggagg caatctggcg cagatcctgg ataagacgtc gcaggtgctg cgcgagcgca
     1741 tccgcatcat tggccagatg cgaatcagga ccgcgcaggg ccgcctcacc ggagggatac
     1801 tcaccggctt acccttcgta atcttcttcg gactcaacat cctgcaacct ggttacggca
     1861 aggtgctttt cgaaacacct acgggccaga agatggtgac ctacgccgcg attctcatgg
     1921 ccattggcat tctgatgatc cgtcgaatcg tgaatgtgaa gttctaagag aggagctgag
     1981 ccatgctgct gtttttcatt tcggccactg taactgtctt cctggtgctg gctgctctca
     2041 tttggttgct cagtgcgaat gaccccgtcc aggaacggct catggaaatc tctgcgacca
     2101 ccaccgcgga aaagcccggg tcgctcatgg tcggcacgcc cagtaccact gcggggcaat
     2161 tggcacagca ggtcaccgaa ttctttgcgc ccatccgcgg tctgctaagt ggctctgacg
     2221 aagaccttgc ctacaagctc acactggcag ggtttcgcaa gccggaacat gtggagatct
     2281 tcaccgccat caagttgctg ttgcccatgg tcggggcgat tgtgggaacg ttctttatag
     2341 gtaatgctct ggtggctgcg gctgtggggg cactactcgg tttcttcctg ccggacatgc
     2401 tgctctcgta cctgatgacc cgcagacaaa cccggatacg tctggcgctg cccgacgcgc
     2461 tcgatctcct ggtgatctgc atggaggcgg gcctgggcgt tgaccaggca ctggttcgcg
     2521 tgggcgagga gatggcggtg agcgcacctg acctggcggc agagtttcag atcattaccc
     2581 tcgaacagcg tgccggaaag gcccggcttg atgcctggcg cagtatggcg aaccggctgg
     2641 atcttgagtt tgtgcgccag ttcgtgacca tgctcatgca gactgagcgc ttcggcactc
     2701 caatagccca tgcgctgggt gtatttgcgg attcgcttcg ctcgcggcgt atgcaggaag
     2761 ccgaagagag cgccgcaaaa agcggtgtca agctgctctt tccgctggtc ttctttattt
     2821 ttcccagcat cttcgtggtg tcaatgggac cggccattct caacctccaa aaaactttcc
     2881 aggagatgtt gaagtaggta tgcgtctgaa tcgcagaaca gtccgggcgg tgaatacgac
     2941 tcgcggcaca gagctgggta caaaggtccg tgtggctgac acaggactga gccggatcgt
     3001 tggcctgctc ggcgagcgtg cgctgccgga aggtgaaggg ctgttgatcg tgccgtcgca
     3061 gggcgtgcac acctggggca tgttgtttcc tattgacgtg ctcattctgg acaacgattg
     3121 gaacgtgctg gcagtgcgca ggaatatgcg tagcttcaga gtgaccagaa tcttctggaa
     3181 ggccgcggcc gtgctggaac tgccatcagg tacggctgcc gccaccgcaa ccgcagtggg
     3241 tgacacgctg agctttgatc gcacggaagt gaattgagcg aggaagttat gcgcttgaga
     3301 cttacatttc gccggaaaga agaaggccag agtcttcttg agacggcggt tgccatgccg
     3361 ctgctcctgg gcattgcctt caatctcatc aaccttggat acttctggtt ttgcattctc
     3421 accatgactg ccgcgccccg tcagggggtg caattttcgg cacaaggttc atcgtcgctg
     3481 gcgacggcta cggcgcccag caccactgcc gtcagcaatc tggtgctcga aaacatgacc
     3541 aacgcactgc atggcgccac aacgtcaaac acttccgttc gcgtttgcag caagagcaaa
     3601 ggcgtgaacg ccgctaccgg catagcgctt tgcgacagct tcggaccggg atttgcgttc
     3661 aatgcggttg gggtagatcc tgaaacgccg gcgtttgtgc tcaatagggt cgatgtgggg
     3721 tacacagtca ctcctctgat ttctggagcc gcgttcaacg tggtgttgcc cagcaccatg
     3781 aattttagac ggcaggtctc aatgaggtcc ttgtattgag tccatgctga gaaggtatcc
     3841 aatccgcacg cgcgggcagc gcggccagag cctcctggag actgcaatga tgatcgtggt
     3901 gatcttcacc gtggtcttct gggtttttga gcttggctgg ctgatgtaca cgtattcggt
     3961 aatggccgac gcggccaacg agggcgttcg gtatgcggtg gtccacagcg gtggcgattc
     4021 cagcggtgcg cagacgagag tcgcaacttt cgccgcgacc tcgttgcacg acgtctctgc
     4081 tctcagtacg acagttacct tccccgacgg caatgcctcg ccgccgaacc gcgtcagggt
     4141 gaccgtcagt tacacctacg ttccgtggtt gaagggcttt atcaatacgc cgaccatgag
     4201 cacctatgca gaggggagga tgatcgtgcc atgaaaattc gccgccatcc gcatccgtac
     4261 cgtgcatcag agcacggcca gactatgatc cccatcttca tttttatcgg cctgttcctg
     4321 ctggccatgc tcggcgtggc tgctgattac acgcagctct gggcccatcg ccagatggcg
     4381 cagggagcgg ccgacgcggc atgccaggcc ggcgcggcag acctttttat caatgccata
     4441 aatccaactg cgggtgggca gaatggattg cttcctttcg gatacatagg cacgccgttc
     4501 aattgcagta cgaacaccgc tactgccata tgccgctatg cagcgctgaa tggctacacg
     4561 acgggatcaa acgtcaatgt tacattcccg agttcgctgc ctggagtcac gtctttgccg
     4621 tcggccctgg cgaccgcaca tccttatctt gaggtgacga ttaccgatcc cgtggcgatg
     4681 tcatttacgc ggatggtcgg gggcgcatca accgtgaacg taacagccaa ggcaggttgc
     4741 ggcgtcgctc cggccaatgt gccgatcccg cttgtcattc ttcatcccac atcggccgca
     4801 tcgatttcgg tgagcggggc ctcgctcatc aaggtgttcg gggggccgca gcgctcggtg
     4861 caggttgatt ccagcagtgc caccgccgcg agcgtggggt cggtggattt gtcgcaggga
     4921 ggtccctcga attcagggtc tgatttcgcg gtgctcggcg ggcctgcaac ccagcccgga
     4981 ggaatttctc tcgggagtac cggccactac ctctatcctt ccactccctt tggcgatcca
     5041 ttctcgacct acaatgcgcc aagcgcgccg agtactccgg gtgcggtcaa cccggtgccc
     5101 ttcggaatga acgggtgccc cgatcccaac ggttgtgtgg aatttactcc cggagattac
     5161 cgaagctgca catcgagcgg caacatcagc ccaggggata agggctgttt atcactgccg
     5221 tatacaggtt ctaatcccaa atttaagaac attcctggtt ggaccgcgca gcagaatttc
     5281 gcgcaaggcg cggtcattca gccgacgtca aacaacgcca attttgtttt tgtggcgact
     5341 acgggaggga agaccggaaa tacgcaaccc acctggaaca taccggcgcc taatccctgt
     5401 acccttcaga cgaatggaac gtgcaccgga agcacagtca cggacggcac tgttacctgg
     5461 caaaacgttg gtgtgatcaa cctgaacaaa ttgagcaccg gaatatttga tcccggcctt
     5521 tactttgtgg ggacgccggg gctgagcttc ggtgacggtt ccacggcgcg gatcagttgt
     5581 gcaccaccct tcgcgaacgg ccaatgtgcc accactgggg acacctcaaa tggagtgatg
     5641 ttttacttca acagctctgg ctccgttagc gtcacctcga gtagcggtaa tggcaaaccg
     5701 tgcacctctg cttctaacaa cgggaacggc tctccgaacg gatgcgttgt ttcctacaag
     5761 gtcgatggtt ccgccacggg cgcagcactt ggccctatca ggtctcgtcc actgcaatgc
     5821 ccgcaaggga gcgccaatct agcgcaagtg cccacgactc tcgatggaaa tattcttctc
     5881 ggcccatgtt ccggtacgta cgcttccccg gacggcaacc gcggcttcct gttcttccag
     5941 cgcacggctg ctaatcccag atggggagga ggcggccagt tcctttcttc tggtttcatg
     6001 tatttccact ccggcgtggg cggcacctgc ggaaccagca cctcctgcct gacgttgcag
     6061 ggcggctccg gctcgcagtc tttcacgttg ggcaatattg ttgtggataa actcgcgctc
     6121 ggcggtaatc cgcagatcaa catgatcctg aaccccaccg caacctttga agtcttgagg
     6181 ccgacgctgc tcgaatgatt gtccccacgg aaacaacttc gacccggctt gatgcggtca
     6241 accggtcttc cgcctcaaca ccgcgaatca agcctccgcg attcgcggcg ctgccggtaa
     6301 ggcgtgccac gcacagcata ttgctttccg gcactctgca caccctcgct atggcgcttg
     6361 tgatctgggc tcccggacat ctgccgattc cggttgtgct ggagcagcct gcggaagaaa
     6421 tgaaggcaca cgacggcaag ccgattactt ttgagccgtt gccaccggtc aagagcctga
     6481 aggcgaaatc agaaacggct ccgaaagcca cgccgaaggc agcaaatctc aaaacaagtg
     6541 acgctccccc tgctcctctg aaacgcgact acgctgggcc gcaggagatt atttccctgg
     6601 tgccgcatgc caccaatcgc gtacagacca tccttcgccc tgacctggca gcgccaccac
     6661 ctctgaaatt tccgct
//
LOCUS       DASQYP010000037         3377 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_191876, whole genome shotgun sequence.
ACCESSION   DASQYP010000037 DASQYP010000000
VERSION     DASQYP010000037.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 3377)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3377)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3377
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_191876"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..781)
                     /locus_tag="VE783_01005"
     CDS             complement(<1..781)
                     /locus_tag="VE783_01005"
                     /EC_number="2.4.2.1"
                     /inference="COORDINATES: protein motif:HMM:NF006054.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004731 - purine-nucleoside phosphorylase
                     activity [Evidence IEA];
                     GO_process: GO:0009116 - nucleoside metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="purine-nucleoside phosphorylase"
                     /protein_id="HYX51999.1"
                     /translation="MATKPAQARSKSRLTANNDAFAKAEQAAKFIQKKIKVRPQVAIV
                     LGSGLGSFADDMSDAVRIPYSKIPNFPLSTAIGHAGQLVIGKVGGTPAVVMQGRFHQY
                     EGYSPQTVVFPVRVFARMGVRNTILTNAAGGIKLDYGQGRLVLITDHINLQGNNPLVG
                     SEDVRFGPRFIDMTDAYSSRYREMAHRAAEKLGIKLSEGVYAGLLGPSYETPAEIRFL
                     RTIGADLVGMSTVVEVIAARQLGMNVLAISCVTNMAAGILDQ"
     gene            871..2382
                     /locus_tag="VE783_01010"
     CDS             871..2382
                     /locus_tag="VE783_01010"
                     /inference="COORDINATES: protein motif:HMM:NF013155.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52000.1"
                     /translation="MPKACRCVVVFVLCSALGWAQPAKARKKAASPEARTAAYFDSVK
                     TQPSLLMDFLHQMPKGGDLHNHLSGAVYAESFIRWAVEEGLCIDRPSSTFVSCQTSKD
                     SLPASAALTDVVLYAQMLDAFSMRGWMPARESGHDHFFATFGKFGAATNGHTAEMLAE
                     VRAHAARENLQYMELMFNPDNGQAAGLGKRVGWNDDLAKMREALLQAGLLEVVNSARQ
                     GLDQIETREGQGLRCGTQQADPGCNVQARYIYQVARGLAKEMVYAQILAGFEMASRDP
                     RVVGLNLVMAEDWYVPIHDFNLHMKIIDFLHSVYPKVHITLHAGELTPEIAAPEELFH
                     IRASVEQGHAERIGHGVDVMRENNPRALLKEMAKRNVLVEVCLTSNDVILGVSGARHP
                     LPMYLKFAVPVALATDDEGVSRSSMTQEYQKAVETYHFNYSQLKKFVRASLAYSFLPG
                     DGLLPAGKASACQKDRAGAAKLSAACEKLLNSSDKARAQWALEKSFAQFERTF"
     gene            2481..>3377
                     /locus_tag="VE783_01015"
     CDS             2481..>3377
                     /locus_tag="VE783_01015"
                     /inference="COORDINATES: protein motif:HMM:NF019292.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+ dependent nucleoside transporter N-terminal
                     domain-containing protein"
                     /protein_id="HYX52001.1"
                     /translation="MSRFAGLLGIVVLLALAYLCSTNRKAIRLKTILWGLGLQFVFAL
                     IVVYANWGQAVMRRAGDVVNAGLAFAFAGSAFVFGNLGLPADPKVNLPFLPPGHSTVG
                     FVFAFQVLPTIIFISALFAILYYFGIMQVIIKGMAWVMSRFMSVSGAESLDVAASIFM
                     GQTEAPLSIRPLLPECTRSELMTIMTAGMAHVSGGIMAAYIQYGIEARHLLAAVIMTA
                     PGTILMAKMLVPETEHPKTAGTVEISKEDMHKDSNLLAAIARGTIDGGRLAFNVGIML
                     ISFIALIALLNGIMGGIHNHVNW"
BASE COUNT          696 a          924 c          976 g          781 t
ORIGIN      
        1 tctggtcgag aatgcccgca gccatattgg taacgcagga aatggccaga acgttcattc
       61 caagctggcg cgcggctatg acctcaacca cggttgacat gcctacaaga tccgcgccaa
      121 tcgtccgcag aaagcgaatc tccgccggcg tttcgtaact ggggccgagc aggccggcgt
      181 agacgccttc actcagctta atgcccagct tctccgccgc tcgatgcgcc atctctcgat
      241 atcggctgct atatgcatct gtcatgtcaa tgaatcgagg accaaagcgc acgtcttcac
      301 tgccaacaag cgggttattg ccctgcaagt tgatgtgatc ggtgattagc acgagccgcc
      361 cctgaccata atccagcttg atgccccccg cagcattcgt caggatggtg ttgcgaacac
      421 ccatgcgcgc gaacacgcga acagggaaca ctactgtttg cggcgaatag ccttcatact
      481 ggtgaaatct accctgcatg accacggctg gcgtgccgcc aactttcccg atcacgagtt
      541 ggccggcatg gcctatcgcg gtagagagcg gaaagtttgg gatcttgctg taggggatac
      601 gcaccgcatc gctcatatca tcggcgaagc tgcccagacc ggaacccaga acaatcgcga
      661 cttgtggccg gactttgatt tttttctgga tgaactttgc tgcctgctct gccttggcga
      721 atgcatcatt gttcgctgtt aatctggatt ttgatctggc ctgtgccggt ttggtcgcca
      781 cttccgctcc cctgacgtct gtgctggttt cagcaaggga ttgtaaatgc tatattgccg
      841 ggtacatctg catcggagag caaaatgttc gtgccgaagg cgtgtcgctg tgtcgttgtg
      901 tttgtactct gttccgcact cggctgggca cagccggcaa aagctcggaa gaaagccgct
      961 tcgcctgaag cgcgcacggc cgcgtacttc gattcggtca agacccaacc ttcgctcctg
     1021 atggattttc ttcaccagat gcccaagggc ggggaccttc acaaccatct atccggcgcg
     1081 gtgtatgccg agagttttat tcgctgggct gtggaagagg gcctttgtat cgatcgaccg
     1141 agctccacgt ttgtttcctg ccaaacctca aaggacagtt tgcctgccag cgcggctttg
     1201 acggatgtgg tgctctatgc ccaaatgctc gatgcattct ccatgcgcgg gtggatgccg
     1261 gcgcgcgagt ccggacatga tcacttcttt gccactttcg gcaagttcgg cgccgcaact
     1321 aacgggcaca ctgcagagat gctggcggaa gtcagagcgc atgccgcccg cgagaatctg
     1381 caatatatgg agctcatgtt caatcccgat aacggccagg ctgccgggtt agggaagcgc
     1441 gtgggctgga acgatgatct ggccaaaatg cgcgaggcgt tgctccaggc agggctgttg
     1501 gaagtcgtga acagcgcgcg tcagggactt gaccagatcg aaacgaggga aggccaggga
     1561 ctccgctgtg gtacacagca agccgatcct ggctgcaacg tgcaggcccg ctatatctat
     1621 caggtggccc gcggactggc gaaggagatg gtttatgcgc agatccttgc cggatttgag
     1681 atggcatcca gggatccgcg cgtcgtcggg ctcaatctgg tgatggctga ggactggtat
     1741 gttccgatcc atgacttcaa cttgcacatg aagattatcg actttctcca ctcggtctac
     1801 cccaaagttc atatcacgct tcatgccggc gagttgacgc cggagatcgc ggcgccggaa
     1861 gagctcttcc acattcgcgc ctcagtagaa cagggacatg cggagcggat aggccatggc
     1921 gttgatgtga tgcgggagaa caatcctcga gcgctgctta aggaaatggc taaacggaat
     1981 gtgctggttg aagtttgcct gacgagcaat gacgtgattc tgggggtcag tggtgcgcgc
     2041 cacccattgc cgatgtacct gaaattcgca gtgccggttg cgttggctac ggatgatgag
     2101 ggcgtctccc gttccagtat gacgcaggaa taccagaaag cggttgagac gtatcacttt
     2161 aactattccc aattgaagaa gttcgtaagg gcgagccttg cctacagctt cctgcccggc
     2221 gatgggttgt tgccggcggg caaggcttct gcatgccaga aagaccgcgc cggggcggca
     2281 aagctctctg ccgcttgcga gaagctgctt aattccagcg acaaggcgcg cgcccagtgg
     2341 gcgctggaaa agtcatttgc gcagtttgaa cgcactttct gaagtgccac ttcaacccgt
     2401 gccttaacgg ttgacagggc agatacaata gacgggactt tccagcaaca atccattcca
     2461 atcgcaagcg aaggaccaga atgtcacgat ttgcaggact gctgggtatt gttgtgctgc
     2521 tcgcgctggc ctatctttgt tccaccaatc gcaaagccat tcgcctgaag acgattcttt
     2581 gggggctcgg ccttcaattt gtgtttgcgt tgattgtggt ttatgcgaac tggggacagg
     2641 cggtgatgag gcgcgccggg gatgtcgtca acgcagggct cgcgtttgcc tttgccggat
     2701 cggcgtttgt ttttgggaac cttggcctgc cagctgatcc gaaagtgaac ctgcctttcc
     2761 tgccaccagg acattccacc gtgggttttg tgttcgcgtt tcaggtgctg cctaccatca
     2821 tctttatatc ggctcttttt gccatcctct attacttcgg cataatgcag gtcatcatca
     2881 agggaatggc ctgggtgatg agccgcttca tgtcagtgag cggagcggaa tcgcttgacg
     2941 tggccgcctc gatcttcatg ggacagaccg aggcgcctct cagcattcgt ccgctgctgc
     3001 ccgagtgcac acgctcagag cttatgacga tcatgaccgc aggcatggcg catgtctctg
     3061 gcggaatcat ggctgcatat attcagtatg gaatcgaagc caggcatctg ctcgcggccg
     3121 tgatcatgac cgcgcccgga accattctga tggccaaaat gctggtgccg gaaacagaac
     3181 atcccaagac cgccggtacg gtggagattt ccaaagagga catgcacaag gactccaacc
     3241 ttcttgctgc gattgcgcgc ggcaccatcg atggcggcag gctggcgttc aacgtcggca
     3301 tcatgctgat ctcgtttatc gccttgattg ccctgctcaa cggcatcatg ggtggaatcc
     3361 ataaccatgt gaactgg
//
LOCUS       DASQYP010000038         5771 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_149420, whole genome shotgun sequence.
ACCESSION   DASQYP010000038 DASQYP010000000
VERSION     DASQYP010000038.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 5771)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5771)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5771
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_149420"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..410)
                     /locus_tag="VE783_01020"
     CDS             complement(<1..410)
                     /locus_tag="VE783_01020"
                     /inference="COORDINATES: protein motif:HMM:NF015441.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MOSC N-terminal beta barrel domain-containing
                     protein"
                     /protein_id="HYX52002.1"
                     /translation="MHVAEIWRYPVKSLKGEQLQEAEITPLGIPGDREVALVREINNR
                     FLTSRTQPALLGLQGSLDQDGKATINGIPWNTPEAHELINIAAKQAVRLVSTPHPQAF
                     DILPLLVATDGTVGKLGIDRRRLRPNILIAGVDGL"
     gene            complement(480..1244)
                     /locus_tag="VE783_01025"
     CDS             complement(480..1244)
                     /locus_tag="VE783_01025"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HYX52003.1"
                     /translation="MSAHNSRILDQFTRQAVPFSQSPSVSNQEALNFIVQSAGAGSED
                     TVLDVGCGPGLLVCAFAKIVRNATGIDLTPAMLDQARRTQQEQQLSNVTWEQGDVRAL
                     PFRDEQFSIVSSRFVFHHLQEPLVVLKEMKRVCRAGGKVVVADMAPAREKADALNAEE
                     ILRDPSHVRALPEHELRALFSEAGLPEPTIGHYRVECDVDDLLSRSFPNAGDEPKIRK
                     MFADSIAADTMDLRTRLETGKIFYSFPVSVLVAQKR"
     gene            1334..1936
                     /locus_tag="VE783_01030"
     CDS             1334..1936
                     /locus_tag="VE783_01030"
                     /inference="COORDINATES: protein motif:HMM:NF005012.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit B family
                     protein"
                     /protein_id="HYX52004.1"
                     /translation="MSDHLVDPDVEREMLTKRYENTAGNTAADSARHMREVLFGNEQP
                     QGVILTSLDNVVNWMRKSSIWPMTFGLACCAIEMMAMGASRFDIARFGAEVFRPSPRQ
                     SDLMIIAGRVSQKMAPVIRQLWEQMPEPKWVISMGACATSGGVFNNYALVQGVNQVIP
                     VDIYVPGCPPRPEQLIYAITLLQEKIQKERGSFMRALNLA"
     gene            complement(2011..2763)
                     /locus_tag="VE783_01035"
     CDS             complement(2011..2763)
                     /locus_tag="VE783_01035"
                     /inference="COORDINATES: protein motif:HMM:NF019359.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MerR family transcriptional regulator"
                     /protein_id="HYX52005.1"
                     /translation="MYKVSEFAEKAGVTVRTLHHYDRLGILKPSGRTVAGYRLYQDGD
                     FVRLQQIVTLKFIGLPLREIKAVLDRSTMDFAQTLRLQRLILREKRGQVDMAIQAIAE
                     AESSVRAGSAPDLAALKKIIEVMERQNNMEWTKKYYSEEAQAKIAARAATFTPEMQAK
                     VTQQWSELIRDVENAIQHHEEPSSAKARSLAERWSALVGGFTGGDPEIQKGLNKLYAD
                     QGNWPSTMKKPFSDEVHGYIKKAMAVHGISCA"
     gene            2997..4016
                     /locus_tag="VE783_01040"
     CDS             2997..4016
                     /locus_tag="VE783_01040"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="YncE family protein"
                     /protein_id="HYX52006.1"
                     /translation="MLKVKSVLFILILTFGLAAAHAGKLRQVAMVDLPGEPGFNEVAF
                     ANGQVVISRPVTNTIEIFSPVKRRVVARISQVEGPRGIAVDDQASRVYVALRGSSSIA
                     VINSHNWQVEKMIPVQHAPERLLWVPDIKALYASSYLDRTVSVVDPLAGRETSIAELN
                     ALPEDMVFDAARQQLFVSLQDLSEVAVLDRSNKIVNRFRLQASEPTGLALDKARNRLY
                     VAVRFAVLELNADNGSEIIRIPAPGGTDTLVLDPNGNLLFAAGGDGSVLAIDLNKNVV
                     DHELSTDVKGFSIAYDASHHMIFMPGGREGRSKMVILSPISMAEPERPQTAENPKNSG
                     ETARK"
     gene            4130..5767
                     /locus_tag="VE783_01045"
     CDS             4130..5767
                     /locus_tag="VE783_01045"
                     /inference="COORDINATES: protein motif:HMM:NF025017.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cellulose synthase family protein"
                     /protein_id="HYX52007.1"
                     /translation="MVHLSALLSNFLFMLAASSQKGLVQYFKTTFLDKTFKGLYSPNE
                     FDLMLLIPYFVVMIILAGYGLHRYALVYMYYRNRKNKTVEPPSRFDELPRITVQLPIF
                     NEQFVVDRLVESICKLEYPKNKLDVQVLDDSTDETVDVARAVVERYAALGHPITYIHR
                     TNREGFKAGALANGMNTSKGEFIAIFDADFVPSEDWLLRVIHHFADPKIGMVQTRWTH
                     LNRNYSFLTEVEAILLDGHFVLEHGGRSRSMVFFNFNGTAGMWRRKAIEDGGGWQHDT
                     LTEDTDLSYRSQLAGWKFKYVQDIECPAELPIEMTAFKTQQARWAKGLIQTGKKILPK
                     VFRSDVPWRIKVEAFYHLTANISYPLMIVLSTLLLPAMIIRSFGGWFQMLLIDLPLFL
                     ASTFSISSFYLVSQKELMPRTWPRTFLYLPFLMSLGIGLTLTNTRAVLEALFGIKSSF
                     KRTPKYRVQSKADKALGQKYRRRLGIVPWLELLVGTYFFFMCVYAFTSENYWTIPFLL
                     LFVLGYWYTGLMSLLQGRFDKLALAQEPHTKPFPVGV"
BASE COUNT         1182 a         1675 c         1628 g         1286 t
ORIGIN      
        1 agtccgtcaa cgccggcgat aaggatgttg ggacgcaacc gccggcgatc gatgccaagc
       61 ttcccgactg ttccgtcggt agcgaccagc agcggtagga tgtcaaaagc ctgcggatgg
      121 ggagtgctta ccagacgaac ggcttgcttt gccgcgatat tgatcagctc atgagcttcc
      181 ggggtgttcc atgggattcc gttgattgtg gctttcccat cctgatcgag cgagccttgc
      241 aggccgagca gcgccggttg tgtgcgcgag gtgagaaacc gattattgat ttcccggacc
      301 agtgcgactt cgcggtcgcc gggaattccc agcggcgtga tttctgcctc ctggagctgc
      361 tcgcctttca ggctcttaac gggatagcgc cagatttcgg caacatgcat ctacgatgag
      421 atgaggagag tggctggttt gattcaaagc ggcggagcct cacacttctg tcattacatc
      481 tagcgttttt gggccaccag caccgatacg ggaaagctgt aaaaaatttt cccggtctcc
      541 agccgggtac gcaagtccat cgtgtcagcg gcgatcgagt cggcaaacat cttgcggatt
      601 ttcggttcat cgccggcatt ggggaacgag cgcgaaagca ggtcgtcaac gtcgcattcc
      661 actcggtaat ggccgatcgt cggctcgggc agcccggctt cagaaaaaag ggcacgcagc
      721 tcgtgctctg gcagggcgcg gacatgagat ggatcgcgga ggatttcttc tgcgttgagc
      781 gcgtccgcct tctcgcgcgc cggcgccata tcggcaacca ccacctttcc tcctgcccgg
      841 cagactcgct tcatctcctt caaaaccaca agcggctctt gcagatgatg gaatacgaac
      901 cgcgagctga cgatcgagaa ttgctcgtcg cggaaaggca gtgctcttac atctccttgc
      961 tcccaggtta cgtttgagag ttgctgttcc tgctgggtcc tgcgggcctg gtccagcatg
     1021 gccggtgtga ggtcgattcc ggtggcgttc cggacgatct tggcgaatgc gcataccagc
     1081 aaccccgggc cgcaaccgac gtcgagcacc gtatcctctg aacccgctcc cgccgactga
     1141 acaatgaaat tgagcgcctc ctggttgctg acgctcggtg actgagaaaa gggaacagcc
     1201 tggcgggtga attggtcgag aatgcgggag ttgtgcgcgg acatggctca aaaattgtaa
     1261 atttcaaatt ttaaatttca aatttctgct gccttcccct cctctacccc atcgaattag
     1321 aataggaaca gtcatgagcg atcatcttgt agatccagac gttgagcgcg aaatgctcac
     1381 caaacgctat gaaaacacag ccggtaacac ggctgcggac agcgcccgcc acatgcggga
     1441 ggtgctgttc ggcaacgaac agccccaggg cgtgatcctg accagcctgg acaacgtggt
     1501 gaactggatg cggaagagct ccatctggcc catgaccttt ggcctggcct gctgcgcgat
     1561 tgagatgatg gccatgggcg cgtcccgttt tgatatcgcg cgtttcggcg ccgaggtttt
     1621 caggccgtca ccccgccagt ctgacctgat gatcattgcc ggtcgcgttt cccagaagat
     1681 ggcgccagtt atccggcagc tctgggagca gatgccggag cccaaatggg tgatctccat
     1741 gggagcgtgc gccacctccg gcggcgtctt caacaattac gcgctggttc agggtgtgaa
     1801 ccaggtgatt ccggtggata tctatgtccc cggctgcccg ccgcgtccgg aacagctgat
     1861 ttatgccatc accctgttgc aagaaaagat ccagaaagag cgcggatcat tcatgcgggc
     1921 attgaatctg gcgtaaccga ctgctgaagt aattgaaaga ccacggactt acgaaacccg
     1981 tggtctttct gcttgtgggc ctctttacgg ttaggcgcac gagattccat gtaccgccat
     2041 ggctttcttg atgtatccat gcacttcatc gctgaacggc ttcttcatgg tcgaaggcca
     2101 gttgccctga tctgcataca gtttgttcag gcctttctga atttccggat cgccaccggt
     2161 aaagccacca accagcgcgg accagcgttc cgccagcgaa cgtgccttcg cactggaggg
     2221 ttcctcgtga tgttgaattg cgttctccac gtcccgaatc aactcgctcc actgctgggt
     2281 gacctttgcc tgcatctccg gagtgaaagt cgcggccctc gcggcgatct ttgcctgggc
     2341 ttcttcgctg taatatttct tcgtccattc catgttgttc tgcctttcca tgacctcgat
     2401 gatttttttc aaggcagcca gatcaggagc actgccggct ctcacggaac tctccgcttc
     2461 cgcgatggcc tgaatggcca tatcgacctg cccgcgtttt tcccgcagga tcaggcgctg
     2521 cagccgaaga gtttgtgcga aatccatggt gctgcggtcg agcacagcct tgatttccct
     2581 gagaggcaag ccgatgaact taagcgtcac gatctgctga agccggacga aatcaccgtc
     2641 ttgatacagc ctgtacccgg caaccgttcg gccacttggt ttaagaattc caaggcggtc
     2701 gtagtggtgc agggtacgga cggtgacgcc cgctttctcg gcaaattcgc tgaccttgta
     2761 catcgctggc atctctccac aggatcatca gggctgacgt aaggtaaggg tcaagctcct
     2821 tatttggatg tgaacattat ctcgaatcag cagattcata tcaggacatt cggcaggacc
     2881 gctgattccg gccagagtta aagagccacc tccgcctacc gggcaaatgc gacttcagtt
     2941 caggcagcag cacagcccta atccgcatcc gaataccctg acgagcaggt cccctgatgc
     3001 tgaaggtaaa gtctgtcctt ttcattctga ttcttacgtt tggccttgcg gcggcgcacg
     3061 ccggcaagct gcgccaggtc gccatggtgg acctacccgg cgaacccgga ttcaatgaag
     3121 tggcttttgc caacggccag gtggtgatca gccgcccggt caccaatacc attgagattt
     3181 tcagcccggt caagcgtcgc gtggtggcgc gcatctcgca ggtggaaggg ccgcggggaa
     3241 ttgccgtgga tgaccaggcg tcacgagttt acgtggcgct gcgcggcagc agcagcatcg
     3301 ccgtaatcaa cagccataac tggcaggtgg aaaagatgat tccggtgcag cacgcgccgg
     3361 aacgcctgct ttgggtgccg gacataaaag ctctatacgc cagcagctat ctcgaccgca
     3421 cggtgagtgt ggttgaccca ttggcgggac gtgagacttc gattgcggaa ttgaatgctt
     3481 tgccggaaga catggtcttt gatgcagcgc ggcagcagct tttcgtcagc ctgcaggacc
     3541 tgagcgaagt tgcggtgctc gaccgcagca acaaaatcgt gaaccgcttc aggctccagg
     3601 catcggaacc caccggcctt gccctggaca aggcacggaa ccggctatat gtggcggtcc
     3661 gctttgccgt gctggaacta aatgccgata acggctcgga aatcattcgc attcccgcgc
     3721 cgggaggcac ggacaccctg gtgctggatc cgaacggcaa cctgctcttc gccgcaggcg
     3781 gcgatggctc agtgctggct atcgatctca acaaaaacgt ggtggaccac gagctttcca
     3841 cggatgtgaa gggattcagc atcgcctatg atgccagcca tcacatgatc ttcatgcccg
     3901 gcggccgcga aggccgttcc aagatggtga tcctgagccc gatctccatg gcggaaccgg
     3961 agcgccccca gacggcggag aatccgaaga attccggcga aacagccagg aagtgacccg
     4021 gtttcacgag gtactcagtg ctacacggcg ctgccccata accagagttc tcacgaacgc
     4081 tggcctgcag cttcatttac aatcttcttt ctgaatcttc tccccgggag tggttcacct
     4141 gagcgcgctg ctttccaact tcttattcat gctcgcagcc tcctcacaga aggggctggt
     4201 gcagtatttc aagacaacat tcctggacaa aaccttcaag ggcctgtact cgcccaacga
     4261 gttcgacttg atgctgctca tcccctattt cgtggtgatg atcatcctgg cgggatatgg
     4321 cctgcaccgg tatgcgttgg tttacatgta ctaccgcaac cggaagaaca aaaccgtaga
     4381 accgccgagc agattcgacg aactgccgcg catcaccgtg caactgccca tcttcaacga
     4441 gcagtttgtg gttgaccgtt tggtggagtc gatctgcaag ctggaatatc ccaaaaacaa
     4501 gctcgatgtc caggttctgg acgactcaac cgatgagacg gttgacgttg cgcgcgcagt
     4561 cgtagagcgc tatgccgcgc tgggacatcc gatcacctac atccatcgca ccaaccgaga
     4621 gggtttcaag gccggcgcgc ttgccaacgg gatgaacacc tccaagggcg agttcatcgc
     4681 catcttcgat gccgacttcg tgccgtcaga ggactggctg ctgcgcgtga ttcatcattt
     4741 cgccgatcca aagatcggca tggtgcagac acgctggacg cacctgaacc gtaattactc
     4801 cttcctcacg gaagttgagg ccatcctgct ggacggacac tttgttctgg aacacggtgg
     4861 gcggtcccgc agcatggtgt tcttcaactt caatggcacg gcgggaatgt ggcgccgcaa
     4921 agccattgaa gatggaggcg gctggcagca tgacacgctg accgaagaca ccgatctttc
     4981 ttatcgctca cagttggccg gctggaaatt caagtacgtg caggatatcg agtgcccggc
     5041 tgagttgccg atcgagatga cggcattcaa gacgcagcag gcacgctggg caaagggcct
     5101 gatccagacc gggaagaaga tcctgcccaa ggtcttccgc agtgacgtgc cctggcgcat
     5161 caaggtggag gccttttacc acctcacggc caacatcagt tatccgctga tgatcgtgct
     5221 ctccacgctc ctcctgcccg ccatgatcat ccgttccttc ggcggctggt tccagatgct
     5281 gctcattgac ctgccgctct tcctggcatc cacgttctcc atctccagct tttacctggt
     5341 ttctcagaag gaactgatgc cgcggacgtg gccgcgcacg ttcctttacc tgccgttcct
     5401 catgtcgctg ggcatcggac tcacgctcac gaacacgcgt gccgtgctgg aagcgctctt
     5461 cgggatcaaa tcgtcattca agcgcacgcc taaatatcgt gtgcagtcga aggctgacaa
     5521 agctctcggg cagaaatacc ggcgccgcct gggcatcgtg ccatggctgg aattgctggt
     5581 cgggacctac ttcttcttta tgtgcgtgta cgccttcacc agcgagaatt actggaccat
     5641 tccgttcctg cttctgtttg tgcttggtta ctggtacacc gggctgatgt cgctgctgca
     5701 gggccggttt gataagctag cgctcgcgca ggagccgcat actaagccct tcccggtagg
     5761 cgtctaggcg a
//
LOCUS       DASQYP010000039         5200 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_297680, whole genome shotgun sequence.
ACCESSION   DASQYP010000039 DASQYP010000000
VERSION     DASQYP010000039.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 5200)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5200)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5200
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_297680"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1214)
                     /gene="larC"
                     /locus_tag="VE783_01050"
     CDS             complement(<1..1214)
                     /gene="larC"
                     /locus_tag="VE783_01050"
                     /EC_number="4.99.1.12"
                     /inference="COORDINATES: protein motif:HMM:NF014072.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nickel pincer cofactor biosynthesis protein
                     LarC"
                     /protein_id="HYX52008.1"
                     /translation="MRIAYLECFSGISGDMFLGALIDAGVPPEILVKTVGALGVDARL
                     EISRVDRSGISATKVDVIAAGEKELPREEFWAKQQAESHEPSHNHEHAHSRSHDHAHS
                     HSHQHSDHYHSHSHGQESHSHLHGETSLAQSHEPGEGRTHSHSHPHRGLKEIREIILK
                     AKISSTAQQKAIRIFEALGAAEAKVHNSDVEEIHFHEVGAIDAIVDITCAAVGSEALG
                     VDEVVCSPLNVGGGSVVCAHGTFPIPAPATLELLKNAPVYSGEIQKELVTPTGAAIVS
                     VLASRFARFPAMKPHETGYGAGSRDFKGHPNVLRITIGETADETNAEQTVKTKPAYST
                     DEIAILEANVDDMTPQVFGYVMDRVLAQGALDVFGSAVQMKKNRPGMLLTVLCRPEDS
                     QKLTKLIFTETTT"
     gene            1396..3363
                     /gene="argS"
                     /locus_tag="VE783_01055"
     CDS             1396..3363
                     /gene="argS"
                     /locus_tag="VE783_01055"
                     /EC_number="6.1.1.19"
                     /inference="COORDINATES: protein motif:HMM:NF012952.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine--tRNA ligase"
                     /protein_id="HYX52009.1"
                     /translation="MNELLQRQYRVELPRIVVDQPPNVGLGEYALPLSFELAKTLRKA
                     PRQIAQEIVNGLGSVPGFAKFEVAGAGYINAKVDRAGAAKLVMAESVSPKPSDSAEKI
                     LVEHTSINPNKAAHIGHLRNSILGDTFVRLLRASGAHVDIQNYIDNTGVQVADVVVGF
                     LFLEKKSEADVQKLIENPGQRPFDYYCWDLYARVSQWYEEDKKHTKLRLQTLHDIERG
                     GNEPARIGKLISNAIIRRHLETMQRLGIVYDFLPQESEILHLHFWDLAFEQMKQKGVL
                     YFETEGKNKGCWVMKRAGTKDSSSQTTERPPATDGVDASEAKTGPDEDAKVIVRSNNT
                     VTYVGKDIAYHLWKFGLLGKDFGYCRFYRYPDGHEVWISAESGEPDHPHFGGVQAIYN
                     VIDSRQSDPQNNVIEAIRGLGYTEQADNYHHFSYEMVALTPGCALELGYEVSEEDRKK
                     SYIEVSGRKGFGVKADDLLDALITAAKKEVDSRHPEMSEAERQKIAEQIAIGALRYFM
                     LKFTKQSVIAFDFKEALSFEGETGPYAQYAIVRATNIFRKAGVSAEEILAGQTDLRFL
                     EEDDLWELWLRSGQLTAMVRQCIVTTEPAHAAKYAFQLAQMFNNFYHKHHILTEADEA
                     RKRFLLATAAVVRRTLIECLGMMGIEAPTVM"
     gene            3454..4203
                     /locus_tag="VE783_01060"
     CDS             3454..4203
                     /locus_tag="VE783_01060"
                     /inference="COORDINATES: protein motif:HMM:NF016952.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutaminyl-peptide cyclotransferase"
                     /protein_id="HYX52010.1"
                     /translation="MAALGTNGAQKMQSHPAPEYGFKVVHAYPHDPEAFTQGLVFHKG
                     FLYEGTGIRGKSSLRKVKLETGEVLQRFEVSPSYFGEGIAILSDHLIELTWTSHKAFV
                     YNLNDFQIIGQFSYEGEGWGLASDGADLYFSDGTAEIRILDGKTYKEKRRVKVHEGAT
                     PITELNELEIVNGEIFANIWHSDRIARISPKTGQVVGWINLSGLLSPMYKLDKEAVLN
                     GIAYDAAGKRLFVTGKLWPQIFEIELVPPKR"
     gene            4327..5001
                     /locus_tag="VE783_01065"
     CDS             4327..5001
                     /locus_tag="VE783_01065"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF014566.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0071586 - CAAX-box protein processing
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CPBP family intramembrane glutamic
                     endopeptidase"
                     /protein_id="HYX52011.1"
                     /translation="MEKPTKAAPQRWLSLLEFAIGALIVIGHNVFHVLPNEVPILFLL
                     GIVSIRLREGSWRVIGLSRPESWGRTMLIAFLTAVIVILMGLLVISPLVHILGLHYGK
                     SAGTSLGLRKGDILSVLKALGITWTLAAFGEEIAYRRYLLGRAAEAAGGSNLAHWLAL
                     ICVSVLFGFGHYYQGSAGVFRTACDGFVIGAAYLLSRRNLWVAVLAHGFIDSIVFIAL
                     FTGLAD"
BASE COUNT         1096 a         1453 c         1549 g         1102 t
ORIGIN      
        1 gtagtggtct ctgtgaagat gagcttggtg agcttctggc tatcttccgg ccggcagagc
       61 acggtgagca gcatgcccgg acggttcttc ttcatctgaa ccgcgctgcc aaagacgtcc
      121 agcgcgcctt gggccagaac gcggtccatt acgtagccga agacctgcgg cgtcatgtcg
      181 tcaacgttgg cttccaggat ggcgatttcg tcagtcgagt aggccggctt ggttttaacc
      241 gtctgctcgg cgttcgtttc atccgcggtt tcgccgatcg ttatgcgcag cacgttggga
      301 tggcctttga agtcgcgtga gcccgcgccg tagccggtct cgtgcggctt catggcaggg
      361 aagcgcgcga agcgcgaggc cagcacgctt acgatcgcgg cgcccgtcgg cgtgaccagc
      421 tctttctgaa tctcacccga ataaaccgga gcgttcttca gcagctcaag tgttgccgga
      481 gcaggaatgg gaaacgtccc atgggcgcac accacgctcc caccaccaac gttcagcggc
      541 gagcagacga cttcgtccac gcccagagct tcggagccga cggcggcgca ggtgatgtcc
      601 acgatcgcat caatcgcgcc gacttcatgg aagtggatct cctcgacgtc tgagttgtgt
      661 actttggctt ccgccgcgcc gagtgcttca aaaatccgaa ttgctttctg ctgcgcggta
      721 gagctgatct tcgctttgag aatgatttcg cgaatctcct tcagcccgcg atgcggatgg
      781 gagtggctgt gggtgcgacc ttcgccgggc tcatgcgatt gcgcaaggct ggtttcgcca
      841 tgcaaatgag agtgactttc ttgcccgtgc gagtgcgagt gatagtgatc tgaatgctgg
      901 tggctatggg aatgagcatg atcgtgcgaa cgggaatgag cgtgctcatg attgtggctg
      961 ggttcgtgcg actcggcctg ctgcttcgcc cagaactctt cgcgcggcag ctccttttct
     1021 ccggcggcga tcacgtccac cttcgtcgcg ctgattccgc tgcggtcgac acgggagatt
     1081 tccaggcgcg catccacgcc aagcgctccc accgtcttga ccaggatttc aggcggaact
     1141 ccggcgtcga taagggcgcc cagaaacatg tcgccactaa tcccggagaa gcactcaagg
     1201 taagcgatgc gcatagcgga ctaaacagcc atcataggtt tacgctggca gcggcgtcaa
     1261 acccgggccg cgccgcctgg tttgttataa tcgccttttt catcagtaac ttaccgtcag
     1321 cttttacagc ccaacccaaa cctcttaaag gcgaaaactt tgtatctgga attagagcag
     1381 cggcttatcc ggcaggtgaa cgaattgctc cagcggcaat acagggtgga actgccccgc
     1441 attgtggtgg accagccccc gaacgtgggg ctgggggaat acgccctgcc gctgagcttt
     1501 gaactcgcca aaacgctgcg caaggcgcct cgacagattg cccaggagat cgtcaacgga
     1561 ctgggctcgg ttccggggtt cgcgaagttt gaggtcgccg gtgcggggta catcaacgca
     1621 aaggttgacc gggctggagc ggcaaagctt gtgatggcag agtcggtttc gcccaagccc
     1681 agtgactcag ccgagaagat tctggtcgaa cacaccagta tcaatccgaa taaggcggcg
     1741 cacatcgggc acctgcggaa ttcgattcta ggcgacacgt ttgtgcggct gctgcgggcg
     1801 tccggcgcgc acgtcgatat ccagaactac atcgacaaca ccggcgtgca ggtggcggac
     1861 gtggtggtgg gcttcctttt tctggagaag aaatctgaag ccgacgtgca gaagctgatc
     1921 gagaatcccg gccagcgccc cttcgactac tactgctggg acctctacgc gcgagtctcg
     1981 cagtggtacg aagaagacaa gaagcacacg aagcttcgcc tgcaaacgct tcatgacatt
     2041 gagcgtggcg gcaatgaacc cgcacgcatt ggcaagctga tctcgaacgc cataatccgc
     2101 cggcaccttg agaccatgca gaggctgggc attgtctatg atttcctgcc gcaggagagc
     2161 gagattcttc atctccattt ctgggacctc gcttttgagc agatgaagca gaagggcgtg
     2221 ctctacttcg agacggaagg caagaacaag ggctgctggg tgatgaagcg ggctgggacc
     2281 aaggactctt cttcgcaaac cactgaacgg ccgcccgcca cggacggcgt tgatgcttct
     2341 gaagcaaaga caggtcccga cgaagacgcc aaagtgattg ttcgctccaa caacaccgtg
     2401 acgtacgtgg gcaaggacat cgcctaccac ttgtggaagt tcggtctgct cggcaaagac
     2461 ttcggctatt gcaggttcta tcgctatccg gacgggcatg aagtctggat ttcggccgag
     2521 tcgggcgagc cggatcatcc gcatttcggc ggcgtgcagg cgatctacaa cgtcatcgat
     2581 tcacgccaga gcgatccgca gaacaacgtg atcgaggcca ttcgcggcct gggctacacc
     2641 gagcaggcag acaattacca tcacttctct tatgagatgg tggcgctcac gccaggctgt
     2701 gcgctggagt tgggctatga agtctccgaa gaagatcgca aaaagtctta tatagaggtg
     2761 tcgggacgca aaggcttcgg cgtaaaagcc gacgaccttt tggatgcatt gattaccgcg
     2821 gcaaaaaaag aagtggattc ccggcatccg gagatgagcg aagcggagcg gcagaagatc
     2881 gccgagcaga tcgccatcgg ggcgctgcgc tacttcatgc tcaagttcac caagcagtcc
     2941 gtcatcgcgt tcgatttcaa ggaagccctg agctttgaag gcgaaaccgg gccgtacgcg
     3001 cagtacgcaa tcgtgcgggc gaccaacatc tttagaaaag cgggtgtgag cgcggaggaa
     3061 attctggctg gccagaccga cttgcgcttt cttgaagaag acgacctgtg ggagctctgg
     3121 ctgaggagcg gccagcttac ggcgatggtg cggcagtgca ttgtgactac cgaaccggcg
     3181 cacgcggcca aatacgcgtt tcagctggcg cagatgttca acaactttta ccacaagcat
     3241 cacatcctta cggaagccga cgaggcgcgc aaacgctttc tgctggccac ggcggcggtg
     3301 gtgcggcgta cgctgattga gtgcctgggc atgatgggca ttgaagcacc gacagtaatg
     3361 tgagaagact ttgccgcaga ttacgcagat gaacgcagat atgagagttg gctcgtgaga
     3421 ttgcgaactg tttcgcggat tttgctcatc atcatggctg ccctcggaac aaacggagcc
     3481 cagaaaatgc agtcgcatcc ggcccccgaa tatggcttca aggtggtgca tgcctacccg
     3541 catgatcctg aggcattcac gcaggggctg gtgtttcaca aagggtttct ttacgaaggc
     3601 accgggatca gaggcaaatc gtcattgcgt aaggtgaagc ttgagaccgg agaggtgttg
     3661 cagcggttcg aggtatcgcc cagctatttt ggcgagggta ttgccattct cagcgatcac
     3721 ctcatcgaac tcacatggac ttcgcacaaa gccttcgtct acaacttgaa cgattttcaa
     3781 atcatcggtc agttctcgta tgaaggtgaa ggctgggggc tcgccagcga cggcgccgac
     3841 ctttatttta gcgacggcac ggcagagatt cgcattctcg atggcaagac ctacaaagaa
     3901 aaacggcgcg tcaaggtgca cgaaggcgcc acgccgatta ccgaactcaa cgaactcgaa
     3961 atcgtgaatg gcgagatctt cgccaacatc tggcactctg accgcattgc ccgcatttca
     4021 cccaaaaccg gacaggtggt cggctggatc aatctctccg gtcttctcag cccgatgtac
     4081 aagcttgata aagaagccgt gctgaacggc attgcctatg acgcggcagg gaagcggctg
     4141 ttcgtgacgg gcaagttgtg gccacagatt tttgagattg agttggtgcc gccgaagcgc
     4201 tgaactgacg tctcaccttc ggtgcgcggt gcctcactaa tcccggacct gtttgcacga
     4261 agcggctgct tcgaattggc gcccggcgaa tagatttggg gctgttcaag tacaatcctc
     4321 cactcgatgg aaaaaccgac gaaagcggcg ccgcaacgct ggctctcact gctggagttc
     4381 gccatcggag cgctcatcgt tatcggccac aacgttttcc atgtcctgcc gaatgaggtg
     4441 ccgatactgt tcctgcttgg gatagtgtcc atccgcctgc gcgagggaag ctggcgcgtt
     4501 ataggtttgt cgcgcccaga atcatggggc cgtaccatgc ttatcgcgtt cctcactgcg
     4561 gtgatcgtga ttctcatggg cctgttagtc atctcgcccc tggtgcacat tctgggcctg
     4621 cattacggca aatccgctgg cacttctctg gggctcagga agggtgacat tctgagtgtt
     4681 ttgaaagccc tggggattac gtggacactg gccgcgttcg gcgaagagat cgcctatcgc
     4741 cggtacctgc tcggtcgtgc ggccgaagcc gctggcggtt caaacttagc gcattggctg
     4801 gcgctgatct gcgtttcagt cctgtttggg ttcggccact actatcaggg atccgccgga
     4861 gtgttcagaa cggcatgcga tgggtttgtg atcggggccg cgtacctcct cagccggcgc
     4921 aatttgtggg ttgccgtgct ggctcacggc ttcatcgata gcatcgtctt catcgcgctc
     4981 ttcacaggac tagcggacta gaaaagtcag aacggcgggc gctccttcgt ctcaagcgcg
     5041 gcaattcttg ccatgcataa tcgatttaga accccggcgg cctctcccca accacgttga
     5101 acgcacgctc cagcgccagc cccgcgcggc ccaaagttcc ttcttcaaac aaacgcccaa
     5161 tcaacgtgat tccatgcggt acgcgccgcg gcggcgagaa
//
LOCUS       DASQYP010000040         2754 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_65859, whole genome shotgun sequence.
ACCESSION   DASQYP010000040 DASQYP010000000
VERSION     DASQYP010000040.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 2754)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2754)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2754
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_65859"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1394)
                     /locus_tag="VE783_01070"
     CDS             complement(<1..1394)
                     /locus_tag="VE783_01070"
                     /inference="COORDINATES: protein motif:HMM:NF027579.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4910 domain-containing protein"
                     /protein_id="HYX52012.1"
                     /translation="MKTLILTVAAIIVVLVPTRPASAQHLLDQKTFDAIATEYSGEAA
                     QENTRRIVEYHRIQGSPMMAAVAEQVVLPSLKILGLESSIEQFVSDGKIKYGTYISPM
                     GWDMRGGELWVESATGVKDFKPIMLCRYADVPMCVSTYSKGGEWSGELVDVGSGTSDA
                     DYKDHDVHGKVALASGYAANVVRQAVLKHSAVGVVIYPAAGDRPDHPDMVRYNGIWPR
                     AEELDKTSGGFQISRNQYDQLKAFMARGAVRVHGKIDATLGPGKLTLVHAYIRGTEHP
                     EREVLITGHLDHPKWSANDNASGSGAMMEAARTLQALITAKKIAPPRLTIHFMWVPEY
                     FGTLAYVSNHPEVRRQVIANINMDMVGEDTVKTNSRFYFTRSPDSVPSFLDGLLTDVM
                     AQTREADLYAPTGTRSYWMPEAIPYAQGSDHDVFLGLGIPATMLGHDPDWTHHSSEDK
                     IDKTDATEFRRVGT"
     gene            complement(1546..1812)
                     /locus_tag="VE783_01075"
     CDS             complement(1546..1812)
                     /locus_tag="VE783_01075"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52013.1"
                     /translation="MCRANRIYLYIGQIYIEKETAAFMNRFARKRKLIKVDRLLALVT
                     VLWLITSVALLLDWKDSRAQAAHSQPHQVESARLHHAAARALQM"
BASE COUNT          615 a          727 c          827 g          585 t
ORIGIN      
        1 attgtcccaa cgcgccgaaa ttctgttgcg tctgttttgt cgatcttgtc ttcgctggag
       61 tggtgggtcc agtcggggtc gtggccgagc atggtggcag gaatgccaag gccgagaaag
      121 acgtcgtggt cgctgccctg ggcgtaagga atggcttcgg gcatccagta actgcgggta
      181 ccggtaggtg cgtagaggtc agcttcgcgg gtctgagcca tcacgtctgt gagcaggcca
      241 tcgagaaatg aaggaacaga atcgggggac ctggtgaaat agaaacgcga gttggtcttt
      301 accgtgtcct ctccaaccat atccatattg atatttgcga tgacctgccg gcgaacctca
      361 ggatggttgc tgacgtaagc aagcgtgcca aaatattccg gcacccacat gaaatggatg
      421 gtcaggcgcg gcggagcgat ttttttcgcg gtgatgagcg cctgcaaagt gcgcgcagct
      481 tccatcatgg cgccggagcc ggaggcattg tcattggcgc tccacttggg gtggtcgagg
      541 tggccggtga tcaggacttc gcgctccgga tgttccgtgc cacgtatgta ggcgtgaacc
      601 agcgtgagct tgcccgggcc gagcgtggcg tcaatctttc cgtggacgcg cacagcgcct
      661 ctcgccatga aggctttgag ctggtcatac tggttgcgcg agatctgaaa tccgccgctg
      721 gtcttgtcaa gttcttctgc tcgcggccag atgccgttgt agcggaccat gtccggatgg
      781 tcaggccggt cgccagccgc gggataaatc acaacgccga cagcgctgtg cttgagcacc
      841 gcctgtcgca cgacgttggc tgcgtagccg gaagcaagcg ccactttgcc gtggacgtcg
      901 tggtctttgt aatctgcgtc gctggtgccg ctaccaacat caaccagttc gccagaccat
      961 tcaccgccct ttgagtatgt ggagacgcac atgggcacgt cagcatagcg gcagagcatg
     1021 atgggcttga aatctttcac gccagtcgcg ctttccaccc agagttcgcc gccgcgcatg
     1081 tcccagccca tgggggagat gtaggtgcca tatttgattt tgccatcgga gacgaactgc
     1141 tctatcgaac tttccagccc caatattttc aggctcggca gcaccacctg ctcggcgacc
     1201 gcggccatca tggggctgcc ctgaatgcgg tggtattcga cgatgcgtcg cgtgttctcc
     1261 tgggcggctt caccggagta ctctgtggcg atggcatcaa acgtcttctg atccagcagg
     1321 tgctgtgcgg aggcgggccg cgttggcaca agtacgacga tgattgcggc aacagtgagg
     1381 atgagagttt tcatcgccga gaagggtaca gcgaagtttc tgctttatca actcatagga
     1441 agagcggtac gtggaagagc ggtacgtcgc cgattgtagg tatgacgatt ttgcatgtac
     1501 tcgaattggg cgcggctcac ccagtgtagc gagagatgag gaaaattaca tttgcagcgc
     1561 gcgggcagct gcgtggtgca gtcgggcgct ttcaacctgg tgcggctgag aatgagcagc
     1621 ctgagcacgc gaatctttcc agtcaagaag aagtgccacg gaagtaatga gccacagcac
     1681 ggtgacgagg gcgagcaggc gatcaacttt aatcaactta cgtttgcgag caaaacgatt
     1741 catgaaggcg gcagtttcct tttcaatata aatttggcca atgtataaat agatgcggtt
     1801 ggctctgcac acgttactgc tgctgggcag gagctgcgag cataaccttt cattctattt
     1861 caccacggag gcacggagac acggagaaga gcagcttgcc gctgatctgc gcagataagc
     1921 ggtatcagaa gcgaatctat cttctctcca tacctcagct gcgtcgaagg cgatagggat
     1981 ccctcactgc gttcgggatt agagaaagcg ttcggcattt cggcaacagc cttcggcact
     2041 tggcaacaat cgcgactgcg ggaacacgac cacacgtttt ccgaaccttc cacacaaatc
     2101 cacagacttg ccctgaattg cggcgttgac ccttgccatt gatatcacta gagtcgaact
     2161 cacgttctgt tgcagtcgcc acgagcagca tttccagcca aaactgaaac gcattcgccg
     2221 aaggtgggca atccggccac gaaaaaaggc caggtcgtac acccaacgta accctgtgga
     2281 aagcagggtg aaaacccggt gatacacccc tgagtagcgg ataagagacg tgcttgcagc
     2341 aacatatggc gaaagcagga catctgaaaa aagagtacaa tatatagtgt ttgaggcttg
     2401 acttacccca tatacaggcg taatttgtcc ctcacccgca gtactcaact tcctgagccc
     2461 aactagcagg ggccgggaaa actggcaaat cagggcacga aaatccggcg gcagaggtga
     2521 cgccgggaaa cacggtttgc ggtgattcaa aagcaggtct aacacgcgcc gccggctggc
     2581 ctcggcgggg cgaaccaaag ttgggagctc aagatggaaa tgaactggtc gcgatggttc
     2641 cggtgcacat ccagtttcga tctggcgctg gtgccgaagc agccgggggt attcgcgctg
     2701 gcagaggaag ttactcctgc cagcgacacg aacgcgcccc gaatcctggc ggtg
//
LOCUS       DASQYP010000041         3259 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_149478, whole genome shotgun sequence.
ACCESSION   DASQYP010000041 DASQYP010000000
VERSION     DASQYP010000041.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 3259)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3259)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3259
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_149478"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..338)
                     /locus_tag="VE783_01080"
     CDS             complement(<1..338)
                     /locus_tag="VE783_01080"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52014.1"
                     /translation="MPIAVRSFAKINIGLRIGPRREDGFHELRTLYQTLALSDLVRVD
                     YGKGTGIEIYCRDPRVPTDESNTCWRVADRVLRSAKTRGKIRITIEKSLPVQGGLGAA
                     SSNAVATLFAL"
     gene            complement(426..695)
                     /locus_tag="VE783_01085"
     CDS             complement(426..695)
                     /locus_tag="VE783_01085"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52015.1"
                     /translation="MEIMFSMKLKPDGKTVAIEMRCADCKSELEMAQSAAEMRFRCRK
                     HGELGTLTPQEFADGLRQAQEKAAQQYGLSGLKQVRMVGPEPTVQ"
     gene            complement(1163..1561)
                     /locus_tag="VE783_01090"
     CDS             complement(1163..1561)
                     /locus_tag="VE783_01090"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52016.1"
                     /translation="MEQAPLDKSLREEREWAVHWLIDIPDIQVTACPVLAGVRETYRY
                     YPELNGQYSFSMAAFMIEHPDKSKDRVAVNMAGVEGAIRAYRAILKAQPNATSRGMEE
                     LADKQKQGTLEKFVTEATKDCAVEGEQKGL"
     gene            complement(1768..2778)
                     /gene="rocF"
                     /locus_tag="VE783_01095"
     CDS             complement(1768..2778)
                     /gene="rocF"
                     /locus_tag="VE783_01095"
                     /EC_number="3.5.3.1"
                     /inference="COORDINATES: protein motif:HMM:TIGR01229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004053 - arginase activity [Evidence
                     IEA];
                     GO_process: GO:0019547 - arginine catabolic process to
                     ornithine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="arginase"
                     /protein_id="HYX52017.1"
                     /translation="MTTETTVAPSKADATKSDPSKQPVVADNIVPKKIRILGVPLDLG
                     ASRRGVDMGPSAMRVAGLEARLESLGHVVEDGGNVVVALAEQKKEGDPHAKYLKEITA
                     TCTKHAESVFKTLEAGKFPLSLGGDHSMAAGTVAGVAEFFRQQRRVQEQKIGLIWIDA
                     HSDINTPDTSPSGNVHGMPLAAILGLGPSDLANIYNFSPKVHPENCVLVGVRDIDARE
                     KANIKETGIEVYTMRDIDERGMRTVIEEALRVAGRGTAGYHVSLDMDWIDPEDAPGVG
                     TPVRGGASYREAHLAMEIISDHGRMVSFEIVEVNPVIDEHNRTADLAVELALSAFGKK
                     IL"
     gene            complement(2790..>3259)
                     /locus_tag="VE783_01100"
     CDS             complement(2790..>3259)
                     /locus_tag="VE783_01100"
                     /inference="COORDINATES: protein motif:HMM:NF012379.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0043039 - tRNA aminoacylation [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="amino acid--tRNA ligase-related protein"
                     /protein_id="HYX52018.1"
                     /translation="DAVKMLQEGHAKGQVEAKFEWGGDFGSPDETYISSQFDRPVIVH
                     RYPAQVKAFYMEPDPKRPELALACDVLAPEGYGEIIGGSQRIGDYNALRKRIQEHGLP
                     EEAFKWYLDLRKYGGVPHAGFGMGIERAVAWICGLEHVRETIPFARTLTRIYP"
BASE COUNT          603 a         1057 c          870 g          729 t
ORIGIN      
        1 agcgcgaaca gagtagccac ggcattggag gacgctgccc caagcccgcc ctggaccggc
       61 aggctctttt cgatggtgat gcggatcttc ccccttgtct tggccgaacg gagcacgcga
      121 tcagccactc gccagcaggt attgctctcg tccgtgggga cacgcggatc gcggcaatag
      181 atctctatgc ccgtgccctt cccgtagtcg acgcgcacca ggtcagatag cgcaagggtc
      241 tggtagagcg tgcgcagctc atggaacccg tcttcccggc gcggaccaat ccgcaaacct
      301 atgttgattt tggcaaaaga acgaacagcg atgggcatac cgtgagagcc ataatagcac
      361 tgagcagcgc gtctatcgtg ccccggcgct ctcgtcccgt tggccattct cggccttaga
      421 acgtcttact gtaccgttgg ctctggtccc accatcctca cctgttttaa cccgctcagc
      481 ccatactgtt gcgctgcctt ctcctgcgcc tgcctcaacc catcggcgaa ctcctgcggc
      541 gtcagcgttc ctaattctcc gtgcttccgg catcggaacc gcatttccgc tgcgctctgc
      601 gccatctcca gctcgctttt gcagtccgcg caccgcattt caatcgcgac agtctttcca
      661 tccggtttaa gcttcattga aaacatgatt tccataggcg agtcctcttt tcaggagtaa
      721 actttacctt ttattcgcct aacttgtcaa gcaggaagac gggaaggcca agcaattgca
      781 agccttgatt tgcccggccc gagctctctc gttgcgtgtt gaatgtgtgt aggacaggcg
      841 cctcgcctgt cccgcgagac ccgccgcgaa ttaccgccgc ccaataaaga cggctgtttg
      901 tacttcattc gcgtttcaca caagagacct gcgactgtga cgaggcgaag tggttcgtcc
      961 ttgaccattg tttgtaggac gaggcaagcg ctacgagttt gagtcgggta acggtgatga
     1021 gcacccacgt tcacctgata ctgaccccaa tgccggaagg actggatcat gttcgcttgg
     1081 tagcaatcac tggagagtaa tccggcacag gcgagggcgc ccgcgctaca cagccgcctt
     1141 gaaagattgc tgagtagagc tcctacaatc ccttctgctc gccctccact gcgcaatctt
     1201 tcgtcgcctc tgtcacgaat ttttccagcg ttccctgttt ctgcttgtca gccagttctt
     1261 ccatgccacg ggaagtggcg tttggctgcg ccttgagaat tgcgcgatac gcgcggatcg
     1321 ctccctccac gccagccatg ttcactgcca cccggtcctt ggatttgtcc gggtgctcga
     1381 tcatgaacgc agccatggaa aaggaatact ggccgttcag ttcgggatag tagcggtagg
     1441 tctcccgtac tccggccaga accgggcagg cggtcacctg aatatcagga atgtcgatca
     1501 gccaatggac ggcccattcg cgttcctcgc gcaggctttt atcgagcggt gcctgttcca
     1561 tgcgtttggt tacttctaca aaacgcttgc gttcttccgg agtggaaggg ccgcggtcat
     1621 tttgctgttg tgcagtacct attccaagaa cgccaagcaa taggaaaaaa aacaagcgcc
     1681 tgcgcatggg gcctccgcag cttcgctgct ggctgatgaa ttgttcggcc gtaccctgcc
     1741 tctaatcgta agccaggtca gccgtgctta caggattttc ttcccgaacg ccgagagcgc
     1801 cagctccacc gccaggtcag ccgtgcggtt gtgctcgtcg atcaccgggt tcacttccac
     1861 gatctcaaag ctcaccatgc ggccatggtc ggagatgatc tccattgcca ggtgtgcctc
     1921 gcgatagctg gcgccgccgc gcaccggcgt tcccacaccg ggcgcatctt ccggatcgat
     1981 ccagtccatg tccagcgaaa cgtgatatcc ggcggtaccg cggcccgcga cgcgcagcgc
     2041 ctcttcgatc accgtccgca tcccgcgctc gtcaatatcg cgcatggtgt aaacctcgat
     2101 cccggtttcc ttgatgttag ccttttcccg ggcatcaatg tcccgcacgc cgaccagcac
     2161 gcagttttcc ggatgcacct tgggagagaa gttatagata ttggccagat cactcggtcc
     2221 cagcccgagg atggctgcca gcggcatccc atgcacgttg ccgctgggcg aggtgtccgg
     2281 agtattaatg tcggaatgag catcaatcca gatcaacccg atcttctgtt cctgcacccg
     2341 gcgctgctgc cggaaaaatt ccgccacccc ggccacggtc cccgccgcca tggagtggtc
     2401 gcctcccagg ctcagcggga acttgccggc ctcaagggtc ttgaacaccg attccgcatg
     2461 cttggtgcag gtggcggtga tctctttcag atacttcgcg tgcggatcgc cttccttctt
     2521 ctgttcggcg agagccacca ccacgttgcc gccgtcttcc accacgtgtc ccagcgactc
     2581 cagccgggcc tcaagtcctg ccacgcgcat ggcggaaggg cccatatcta ctccgcggcg
     2641 tgaggcgcca agatccagcg gcacccccag aatcctgatc ttcttgggga cgatattatc
     2701 ggccaccacc ggctgcttgg acggatcaga tttcgtcgca tccgccttgc ttggagctac
     2761 agtcgtttcg gtcgtcataa acgctctttt taaggataga tgcgcgtcag agtacgtgcg
     2821 aatggaatcg tctcgcgcac gtgttccagg ccgcaaatcc atgccacggc gcgctcaatg
     2881 cccatgccaa atcccgcgtg cggcacgcct ccgtatttgc gcaagtccaa gtaccacttg
     2941 aacgcctctt ccgggagccc atgttcctgg atccgcttgc gcaacgcgtt gtaatcgccg
     3001 atgcgctgcg agccgccgat gatctcgccg tagccctccg gagccagtac gtcgcaggca
     3061 agcgccagtt ccggccgctt cgggtccggc tccatataga acgccttcac ctgcgccggg
     3121 taccgatgca cgatcaccgg ccggtcgaac tgcgacgaaa tgtaggtctc atccggcgat
     3181 ccgaagtccc cgccccactc gaatttcgcc tccacctgcc ctttggcgtg cccttcctgg
     3241 agcatcttca ccgcatcgt
//
LOCUS       DASQYP010000042         2416 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_128786, whole genome shotgun sequence.
ACCESSION   DASQYP010000042 DASQYP010000000
VERSION     DASQYP010000042.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 2416)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2416)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2416
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_128786"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            1106..1861
                     /locus_tag="VE783_01105"
     CDS             1106..1861
                     /locus_tag="VE783_01105"
                     /inference="COORDINATES: protein motif:HMM:NF012257.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0030552 - cAMP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Crp/Fnr family transcriptional regulator"
                     /protein_id="HYX52019.1"
                     /translation="MSASSNRSWQSGDDIESLAAAASGDQPSDLLNRSGLAGSMLDIG
                     PRRVIFHQGDSADSVYLIHCGTVKLTVVSDDGKEATVALLGSGDLLGEACITGKVSDR
                     ISTAQTVTKCRLLRVSRASMAQVIHKDPQFLDYFLSFVVSRNLKMQDDLLAQLFTSSE
                     KRLARTLLMLAGFGHDHAEQAHVQRMSHEELAEIVGTTRSRISYFMNRFRRQGHIDYS
                     GITGELVINHSLISIAHGLPACQLCPRRDKAAS"
BASE COUNT          561 a          675 c          656 g          524 t
ORIGIN      
        1 gagcgtgtag ggccgggaga gccgtgtaga tgatgagccc gcaacaaaat cccagcttca
       61 ataaacaatg gccgagagga ccagaaacgg tggatacaga cgcccagttc cgagcggcag
      121 gtttactcag catgtacagc ctcctgttgg agcagtttga tgtccagcta ttctatctgc
      181 ccaccgcgac cgcctcctcc ctagcgaaaa gcctatcgaa aagcgcggag cctagggcgt
      241 gcaaaagatg cccaggctcc gcggctgcag gctacgggat acaaaggaaa attggataag
      301 cggcagcagc agtggtcttg agctgctgaa cggggagaac aacgatcttc ttcatggctt
      361 gtatgctcct ttttcaaaat tgcgctcagg cagtatgtag ctcctgcgaa cgcatgaaga
      421 aagactaacc gcttgtctag tcatttattg tggataccac tgaaaattac aacttcagta
      481 tcccaaaatg aaaccaccat tcccataatg gaaccgaatt cactctccct gggacttatt
      541 tatagaggat aacaagtctt gtcttggcaa tcttataggt tacctagttc cgacgtgcag
      601 gccaaaccaa tggccggtgt gagtttgccg gtctcggcag ggctgtctcg catggcaatg
      661 gttggctgag gaacgggcgc cgagcctgtc cggaacacag caattctcgg ctgcgtgttc
      721 cgccggtttt cctgacggaa tcccgcggaa ttcccgggga tacgattcgc ccgcgtggcg
      781 cttaacaatt tttaatcaac agataagcac ctgcgttttc aaagcggtca cgcgttcttg
      841 tggcctatcc gctcgattcc agctgtttac aaaagcgctg ctttgcgata tgagatgtag
      901 gcaaaagccc ccgaccaggg tccgcttaat cgatagtaaa gaggactttg gagggaatac
      961 tgcagcaagc accgcgcgac ttccgggttg cgggtaactg aaagcgagtt acggccgaag
     1021 cgcacttctg tttcttcttc gcgctcgtta gcccatcgct gcgccttttt tcggcgcgac
     1081 aacgctgaag tttagaaagc acgagatgag cgcaagttcg aaccgatcct ggcagtcggg
     1141 tgatgacatt gaatcactag ccgcagccgc atcaggggat cagcccagcg accttcttaa
     1201 ccgatccggc cttgccggca gcatgctgga tatcgggccc cggcgagtga tctttcatca
     1261 gggcgattca gccgattctg tatatctcat ccattgcggc actgtgaaat tgacagtggt
     1321 ttccgatgac ggcaaagaag ctacggtcgc gctgctcggc tcgggcgatt tgctgggaga
     1381 agcctgtatc accggcaaag tctcagaccg catcagcaca gcgcagaccg tgaccaaatg
     1441 ccgacttctc cgcgtatcgc gagcttccat ggcgcaggtc atccacaaag acccgcaatt
     1501 cctggattat tttctttcat tcgtagtgag ccgcaacttg aaaatgcagg atgaccttct
     1561 ggcgcagctt ttcacttcca gtgaaaagcg tcttgcgcgt actctgctga tgttagccgg
     1621 atttggtcac gatcatgcgg agcaagctca cgtccagaga atgagccatg aagaactggc
     1681 ggagattgtg ggcaccacac gttcgcggat cagctacttc atgaaccgct tccgccgtca
     1741 gggacatatt gactactcgg gcattacggg tgaactggtg atcaatcact cgttaatctc
     1801 cattgcgcat ggcctgccag cctgccaact atgccccagg cgggataagg ccgcttcgta
     1861 atggcggcgg ctctcaaatc ctaagcgtcc gccacgatat aaagctcgag ttgagcaaaa
     1921 ttgcacaact cgctcccgcg tgctgaccga agatgctgcc caattgcatc ccgcaaaaag
     1981 gcgggcccgc cctgttttga aggagaacaa gccgatggga gcagtgtgtc cagcggacgc
     2041 gcggttccgg gtaaggactt gaaagcagcg tgtcttgaga gacaacaagc gatgcgcccg
     2101 cgcgcctaag cggagaacat cgcctaaaag cggtccaatc gcggtctctg gcggaactgc
     2161 tcctctacgt tctccagtcg ccgcattctt ccggtgaagc ggccatctcc gccgagcctg
     2221 taattaggag tgaacacgcc aatgagtatc ttctatctgc cccgaaacgc atccaaagcc
     2281 cgcttgcgcg atgccgagaa cgctcgcaag aaccgggcgg aagtcctggc cgcctactcg
     2341 cagggccagg tcagccgtcg tgaactgatc aagtggggac tcttcaccac tgccggagcc
     2401 cttgctccca tcggcg
//
LOCUS       DASQYP010000043         3634 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_276437, whole genome shotgun sequence.
ACCESSION   DASQYP010000043 DASQYP010000000
VERSION     DASQYP010000043.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 3634)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3634)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3634
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_276437"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(50..679)
                     /locus_tag="VE783_01110"
     CDS             complement(50..679)
                     /locus_tag="VE783_01110"
                     /inference="COORDINATES: protein motif:HMM:NF012955.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HYX52020.1"
                     /translation="MIHKILAVGPLQCNCSIIGDEQSREAMVIDPGDQIEDILAILKN
                     ERLTLKQIVITHAHIDHVGGAMKLKAATGAPILLNQNDEALLKMLDVQAAWIGMRAPG
                     EVKVDESADAGTLVKAGSITGNVIHTPGHTEGSICVYFPEQKTLIAGDTLFAGSIGRT
                     DLPGGSFEKIMRSLHTQVLALPDETQVVPGHGPVTTIGEERESNPFLQK"
     gene            complement(803..1096)
                     /gene="secG"
                     /locus_tag="VE783_01115"
     CDS             complement(803..1096)
                     /gene="secG"
                     /locus_tag="VE783_01115"
                     /inference="COORDINATES: protein motif:HMM:TIGR00810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015450 - protein-transporting ATPase
                     activity [Evidence IEA];
                     GO_process: GO:0043952 - protein transport by the Sec
                     complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecG"
                     /protein_id="HYX52021.1"
                     /translation="MLTGLITAIHVIVCAILIVVVLLQHGKSADIAATFGGMGSQTAF
                     GPRGAATALSRLTTWCAIIFMLTSISLTIFASRRAGSNSIMQNVKTPVAPAQK"
     gene            complement(1134..1218)
                     /locus_tag="VE783_01120"
     tRNA            complement(1134..1218)
                     /locus_tag="VE783_01120"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(1182..1184),aa:Leu,seq:gag)
     gene            1442..2419
                     /locus_tag="VE783_01125"
     CDS             1442..2419
                     /locus_tag="VE783_01125"
                     /inference="COORDINATES: protein motif:HMM:NF024816.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HYX52022.1"
                     /translation="MPEAKPSLEQLRDQLRQAEAAGDPWKQGIVLNNLGSYFKEKRET
                     ATALQYFHKALEFFTALDDGEKKGTVLVNLGGTFLDARDPQRALEMFAMALGTYGALN
                     HSFGQGVALNNMGGVHLGQKAYEEARNQFVLASSFFRSANALTWEAQALENLAAAESG
                     MGNMKAAMDSYGRALEIWQKQDQFERQALILNRIATLQTNLGDSRRALELHGRALALA
                     QKANNISIAASARSSLGRIYFDARNFNAARTEFQAALLSYEELGDKRGQAQMLLSLAK
                     IDIASGQELAGFAARLFREAGDKAGEQAASELIPSDPAPARPAQKDKSA"
     gene            2581..3060
                     /locus_tag="VE783_01130"
     CDS             2581..3060
                     /locus_tag="VE783_01130"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52023.1"
                     /translation="MKRFANIQDALEFAAANHSLKFPFNCRCNGFTLKVLSPDLARTT
                     DRDRPTLVVSRSSSGQIELGYIVSLQALQSILKQLSAPQARYSLLCGREEVTVLCDEP
                     LGETQRFTFPIARKHPELAEQTAEYVLLLSRSQAKAWHRFWLPLESRLLHSSIASVT"
     gene            complement(3062..>3634)
                     /gene="tpiA"
                     /locus_tag="VE783_01135"
     CDS             complement(3062..>3634)
                     /gene="tpiA"
                     /locus_tag="VE783_01135"
                     /EC_number="5.3.1.1"
                     /inference="COORDINATES: protein motif:HMM:NF012349.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004807 - triose-phosphate isomerase
                     activity [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="triose-phosphate isomerase"
                     /protein_id="HYX52024.1"
                     /translation="EVGAQDMHWEKEGAFTGAISAHMLQAAGCTHVIIGHSERRQYFG
                     ETDDTVNLKLKSALVVGLKPIVCVGEVIQEREAGLTEDVLRRQCGIAFRQISGDAART
                     IIVAYEPVWAIGTGKTATPELAGEAHRVIRAEAAEALGDEIASNMRILYGGSVKPDNA
                     KLLMAHPDIDGALVGGASLDPKSFAAIVRY"
BASE COUNT          782 a         1073 c          983 g          796 t
ORIGIN      
        1 gtggctgacc gacggcgcgg acgtgaacgt cagcaccagc aaatgaagtc tatttctgca
       61 gaaaaggatt actttcgcgc tcttcgccaa tcgtagttac tgggccgtgt cccggcacaa
      121 cttgtgtctc gtctggcagc gcaagcacct gagtgtgtag agagcgcatg atcttctcga
      181 atgatccgcc tggcaggtct gtccttccaa tgctgcctgc gaacagtgtg tctcctgcaa
      241 tgagagtctt ctgttcaggg aaatagacgc agatgcttcc ctcggtgtgg cccggcgtgt
      301 gaattacatt gccggtaatc gatccggcct tcaccagcgt acctgcatct gctgattcat
      361 ccactttcac ctcgcctggc gcccgcatcc ctatccacgc ggcttgcacg tcgagcattt
      421 tgagcaatgc ctcatcgttc tggttcagca ggataggggc gccggtcgcc gctttcagct
      481 tcattgctcc gcccacgtgg tcgatgtgcg catgggtgat cacaatctgc ttcagcgtga
      541 gccgctcgtt cttcaggatg gcgagaatgt cttcgatctg gtcaccggga tcgatgacca
      601 tggcttcacg gctctgctcg tcgccgatga tcgagcaatt gcattgaagc ggaccgaccg
      661 cgaggatttt gtgaatcatg aagagatgct actagcttcg agctgctggc cgctagcttt
      721 cgcgcccatc atgggcagaa tgagaacgcc ctccaaatag ggagggcgtt tcgagcttca
      781 gctaaaagct agttgctcgc agctattttt gggctggagc taccggggtt ttcacgttct
      841 gcatgatcga attcgatcct gccctgcggc tggcgaagat ggtaagcgag atcgaagtga
      901 gcatgaagat gatcgcgcac cacgtggtca ggcgagagag cgcggtagcg gccccacgag
      961 gtccaaaggc cgtctggctg cccattccgc caaacgtggc ggcaatatca gcgctcttgc
     1021 cgtgctgcag cagcaccacc acgatgagga tggcacaaac gataacgtga attgcagtga
     1081 tcagaccggt aagcattctt ttgctggatt ccttcggaaa atttcttttc ttatggtgcg
     1141 gaagggggga tttgaacccc cacgcctctc ggcgccaccc cctcaagatg gtgtgtctgc
     1201 cagttccacc acttccgcac tggtacgacc agtaactccc aattgcggtt gatgacgccg
     1261 aatcggtgag gagggaatct cattatagca aattcccgtg gccacttacc cgaacgtcag
     1321 gcgcccgaaa aattctgctt gcttccactc tgctctccgt ggatgattgg cctcaacgtt
     1381 ttcgttcgag atcgtccaac ccttacaatt gacccctgct ttttagctcc aggacggtaa
     1441 tttgcccgag gctaagccca gtttagagca gctccgcgat cagcttcgcc aggcagaagc
     1501 cgccggagat ccgtggaagc aggggattgt cctcaacaat ctgggcagct atttcaaaga
     1561 aaagcgtgaa accgccaccg ctctgcaata ctttcataaa gcgctggaat tcttcacggc
     1621 gctcgatgac ggagagaaga agggcacagt ccttgtaaac cttggcggca cgttccttga
     1681 tgcgcgcgac ccccagcgcg ccttggagat gtttgccatg gctctgggca cctacggagc
     1741 gttaaaccat agcttcggac agggagtggc gctcaacaac atgggcggcg ttcacctggg
     1801 gcagaaggct tatgaagaag cgcgcaatca gtttgtgctt gcgtcttcgt ttttccgctc
     1861 ggccaatgcg ctcacctggg aagctcaggc gctggaaaac ctggccgctg ccgaatcggg
     1921 catggggaac atgaaggcgg caatggacag ctacggccgc gcgctggaga tttggcagaa
     1981 gcaggaccag ttcgagcgac aggccctcat cctaaaccgc attgcgacgc tgcaaaccaa
     2041 tctgggcgac agccggcgcg cacttgagtt acacgggcgc gctcttgccc tggctcaaaa
     2101 agccaacaac atctccattg ccgcatcagc aaggtccagt ctcggtcgga tttattttga
     2161 cgcgcggaac ttcaacgctg cccgcaccga attccaggca gcgctcctgt catacgaaga
     2221 actcggagac aaacgcggcc aggcgcagat gctgctctcg ctggcgaaga ttgatatcgc
     2281 ttctggtcag gaactggccg gttttgctgc caggcttttc cgtgaagcag gagacaaagc
     2341 cggggaacag gcagcctctg agcttatccc cagcgatccc gcaccggcga gacccgctca
     2401 aaaggacaaa tcagcatgag ggccgctcga aacacaagct agagggtttt ccgcgcattg
     2461 gtgcgccgaa ttcggccaca acgacaatca ttaaaacttc taatctttca tcaatcttaa
     2521 tctaatcaga gatcaataga acaaagctcc aatggcgcag cggggcgcaa gggagctgcc
     2581 atgaaacgat ttgcgaatat tcaagatgct ttggagttcg ctgcggcgaa ccacagcctg
     2641 aagttcccat tcaactgccg atgcaacggt ttcactctga aagttctctc gcctgatctc
     2701 gcccgtacca cagaccgtga tcgcccgact cttgtggtga gcagaagcag ttcggggcaa
     2761 atagagctcg gctacatcgt gagcctgcaa gctctacaaa gcatcctcaa acaactttca
     2821 gcgccacagg ctaggtacag tctgctgtgc ggcagggaag aggtaacggt cttatgcgac
     2881 gagccgctcg gtgaaaccca gcgctttacg tttccaattg cgcggaagca ccccgaactt
     2941 gcagagcaga cagcagagta tgtactttta ctttcacgtt cccaggccaa agcctggcac
     3001 cgcttctggc tgcccctgga atcgcggctg ctgcactcgt cgatcgcctc cgtcacgtga
     3061 gttaataccg cacaatagcc gcgaacgatt tgggatcgag gctggcccca cccactagcg
     3121 cgccgtcgat atcgggatgc gccatcagca gcttggcgtt gtcaggtttc acgctcccgc
     3181 catagaggat gcgcatgttc gacgcaatct catctcctaa cgcctccgcc gcttctgctc
     3241 ggatcacccg gtgggcctct ccggcgagct ccggcgttgc ggtcttgcca gttccaatcg
     3301 cccagaccgg ctcatacgcc acgataatcg tgcgcgccgc gtctcctgaa atctgccgga
     3361 aagctatgcc gcattgccgc cgcaaaacgt cttcggtcaa acctgcctcg cgctcctgaa
     3421 tcacctcgcc tacgcagaca atcggcttta gcccaactac caatgcagat ttgagtttga
     3481 gattcaccgt gtcatctgtc tcaccgaaat actgcctccg ctcagagtgg ccgatgatca
     3541 cgtgcgtgca ccctgctgcc tgcagcatat gcgcggagat tgcgccggtg aaagcgcctt
     3601 ctttttccca atgcatgtcc tgggcgccca cctc
//
LOCUS       DASQYP010000044         5453 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_107119, whole genome shotgun sequence.
ACCESSION   DASQYP010000044 DASQYP010000000
VERSION     DASQYP010000044.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 5453)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5453)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5453
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_107119"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(1..429)
                     /gene="rpsK"
                     /locus_tag="VE783_01140"
     CDS             complement(1..429)
                     /gene="rpsK"
                     /locus_tag="VE783_01140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004633577.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S11"
                     /protein_id="HYX52025.1"
                     /translation="MAKAAAAGGGATGTKGKKKVFKKKERKNVPHGICYIQASFNNTI
                     VTITDGEGRTLSWKSSGSLGFRGSRKGTPFAAQQAAMNAANQARDHGMRSIEVRVNGP
                     GSGRESAIRALAAAGLDVKSIRDVTPIPHNGCRPPKRRRV"
     gene            complement(538..924)
                     /gene="rpsM"
                     /locus_tag="VE783_01145"
     CDS             complement(538..924)
                     /gene="rpsM"
                     /locus_tag="VE783_01145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009125149.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S13"
                     /protein_id="HYX52026.1"
                     /translation="MARISGVDLPRNKHVDIALTYIYGIGNARSKTILSAAKVEPLKK
                     VQDLNEDEVNRIRQVIENEGSVEGDLRKDISMHIKRLIEIGSYRGYRHRRNLPVRGQR
                     THTNARTRKGPRKGTVANKKKAAAKT"
     gene            complement(995..1108)
                     /gene="rpmJ"
                     /locus_tag="VE783_01150"
     CDS             complement(995..1108)
                     /gene="rpmJ"
                     /locus_tag="VE783_01150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003720928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L36"
                     /protein_id="HYX52027.1"
                     /translation="MKVRASVKKICDKCKIVHRKGVVRVICENSKHKQRQG"
     gene            complement(1283..1501)
                     /gene="infA"
                     /locus_tag="VE783_01155"
     CDS             complement(1283..1501)
                     /gene="infA"
                     /locus_tag="VE783_01155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012039277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003743 - translation initiation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006413 - translational initiation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-1"
                     /protein_id="HYX52028.1"
                     /translation="MSKEDAIEVMAVVIEPLPNAMFRVELENKHQVLAHVSGRMRKNF
                     IRILPGDKVAVELSPYDLTRGRIVYRYK"
     gene            complement(1585..2334)
                     /gene="map"
                     /locus_tag="VE783_01160"
     CDS             complement(1585..2334)
                     /gene="map"
                     /locus_tag="VE783_01160"
                     /EC_number="3.4.11.18"
                     /inference="COORDINATES: protein motif:HMM:TIGR00500.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type I methionyl aminopeptidase"
                     /protein_id="HYX52029.1"
                     /translation="MINCKSHSELEKMRRSGQIVRQVLETVKALVKPGVSTMDLERVA
                     EEKIKELGAKPAFKGYYDYPCVLCTSVNNEIIHGIPSEKRVLKEGDIVSIDCGVVLDG
                     YYGDSAITVPVGQTLAPELKKLLEVTEQSLKNAIAEVRLGKTVGDVGAAVQEYVEANG
                     FSVVRDFVGHGIGTRLHEDPQVPNFGVRGHGTRLREGMVLAIEPMVNIGRPGAKVLED
                     KWTAVTEDGSYSAHFEHCVAVTRNGPMILTE"
     gene            complement(2337..3044)
                     /locus_tag="VE783_01165"
     CDS             complement(2337..3044)
                     /locus_tag="VE783_01165"
                     /EC_number="2.7.4.3"
                     /inference="COORDINATES: protein motif:HMM:NF001380.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016776 - phosphotransferase activity,
                     phosphate group as acceptor [Evidence IEA];
                     GO_function: GO:0019205 - nucleobase-containing compound
                     kinase activity [Evidence IEA];
                     GO_process: GO:0006139 - nucleobase-containing compound
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate kinase"
                     /protein_id="HYX52030.1"
                     /translation="MSATSAQFNARTVGPIILLGAPGAGKGTQSMVVSGRYGIPQIST
                     GDILRINVARGTDLGKKADPIMKAGNLVPDELMLPMVGERLKQPDCQRGFILDGFPRT
                     VGQAEWLDSFLEVTTFDGRKVEPVVISIEVGYNQLLQRLTGRRSCPVDGRIYNIYFQP
                     PEKEGVCDSCGSALVQRKDDKEEVISERLKSYEHMTRPLVEYYRKRGCLNMVNGELPV
                     DEVTHQTLAMIEGAVAV"
     gene            complement(3051..4451)
                     /gene="secY"
                     /locus_tag="VE783_01170"
     CDS             complement(3051..4451)
                     /gene="secY"
                     /locus_tag="VE783_01170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004868351.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015450 - protein-transporting ATPase
                     activity [Evidence IEA];
                     GO_process: GO:0043952 - protein transport by the Sec
                     complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecY"
                     /protein_id="HYX52031.1"
                     /translation="MLEKMGNIFRVPDLRKRVLFTLAMLAVYRLGSHIPTPGINTDAL
                     QKAFEQQSGGLLGFYDLFSGGNLRKLTIFALGIMPYITSSIILQLLTVVWEPLARLQK
                     EGELGRRKITQWTRYLTLILSLLQSMGIAFTLQTQGYVLTGGAWFIIMTMITLTAGSI
                     FIMWLGEQITERGIGNGMSLLIFAGIVVGLPRAVFDLYKKATSAWLGSFTIPAMIILI
                     ALMIAVVAFIVFMERSERRIPVQYAKRVVGRRIMGGQATHLPLRVNSGGVMPVIFASS
                     LLSIPQMLTYSAAFKQGSTLNRYFGWLLDGLRWGEPLYTLLYAVGIVFFAYFYVSIVF
                     NPADVADNMRKHGGFIPGIRPGHRTRDYINDVLTRVTLVGGLYLILISLIPEWMIAGI
                     HLNHLPWWLGGNVFEKFPSWFLTGLGVNFYFGGTSLLIVVGVAMDTVNQIESQLVMRH
                     YEGFTSRGGRIKGRRW"
     gene            complement(4523..4960)
                     /gene="rplO"
                     /locus_tag="VE783_01175"
                     /pseudo
     CDS             complement(4523..4960)
                     /gene="rplO"
                     /locus_tag="VE783_01175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004074878.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L15"
     gene            complement(5099..5284)
                     /gene="rpmD"
                     /locus_tag="VE783_01180"
     CDS             complement(5099..5284)
                     /gene="rpmD"
                     /locus_tag="VE783_01180"
                     /inference="COORDINATES: protein motif:HMM:TIGR01308.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L30"
                     /protein_id="HYX52032.1"
                     /translation="MAAKKTIKIKYVRSKICTPVKHKLVVKGLGFTRLNQVIEREDTP
                     SIRGMIAKIPHLVEIVQ"
     gene            complement(5289..5441)
                     /locus_tag="VE783_01185"
     CDS             complement(5289..5441)
                     /locus_tag="VE783_01185"
                     /inference="COORDINATES: protein motif:HMM:NF015664.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52033.1"
                     /translation="MTSAGVQNVLTKSIGTANPHNVIKATFDALNRLRDKQEVATMRG
                     KAAQEL"
BASE COUNT         1023 a         1724 c         1410 g         1296 t
ORIGIN      
        1 ttatactctg cgccgtttcg gtggccggca gccgttgtgc ggaatcgggg taacgtcgcg
       61 gatcgacttt acatccaggc ccgcggcggc caaagcgcgg atcgccgact cccggcccga
      121 tcctggcccg ttcacacgca cttcaatgct gcgcatgccg tgatcgcgcg cctggttggc
      181 ggcgttcatc gccgcctgct gcgcggcaaa cggagtgcct ttacgcgacc cgcggaagcc
      241 cagcgagcca gagctcttcc atgagagcgt acgcccttcg ccgtccgtga tggtcacaat
      301 ggtgttgttg aacgaagcct gtatgtaaca gattccgtgc ggaacgttct tgcgttcctt
      361 cttcttgaaa accttcttct tgcctttggt tccggtggcg ccgccaccgg ccgctgctgc
      421 ttttgccatt tacgtattcc tcagatccct gttcgcatcc atcacgctgg attcaccagc
      481 ggtgtggccg ttagcttctg gcctctagct acttagctag cagctggaag ctcgcggcta
      541 tgtcttcgcc gctgccttct tcttgttcgc taccgtgccc ttgcgcggtc ccttgcgggt
      601 gcgggcattg gtgtgcgtac gctgtccgcg caccggcagg ttgcggcgat ggcggtagcc
      661 gcggtacgag ccgatttcga tcagccgctt gatgtgcatg gagatgtctt tgcgcagatc
      721 accttccacg ctgccttcgt tctcgatcac ctggcggatg cggttgacct cgtcttcgtt
      781 caggtcctgc accttcttga gcggctcaac cttggccgcg ctcaggatgg tctttgaccg
      841 ggcattgccg attccgtaga tataagtcag cgcgatgtcc acatgcttgt tacgcggaag
      901 atcgacgcct gaaatacgtg ccatgttttc tccttggtgc ttctgctgat cggtttacag
      961 cctggccggc ggtcatcccg atccgtttga aaatttatcc ctggcgctgc ttgtgttttg
     1021 aattctcgca gatcacacgc accacaccct tgcggtgcac gatcttgcac ttgtcgcaaa
     1081 tcttctttac tgatgcccga accttcatgt ttttccgcct actctgttgt tccaacctgc
     1141 cgccatgtgt tgccggcggc gttcactact gagttggtaa ttttgtaact tggtaaatgg
     1201 gtaattgaat ctcgccagcg cctggctaaa ttaccaactt accaaattac ccgattacca
     1261 atttctcgag gccgtacagg ccttatttat atctgtacac aatcctgcca cgcgtcaaat
     1321 cgtagggcga aagctcaacc gctactttgt cgccgggaag aatacggatg aagttcttgc
     1381 gcatccggcc ggagacgtgc gccagcacct gatgtttgtt ctccagttcc acccggaaca
     1441 tggcattcgg caggggctcg atcaccactg ccataacttc aatcgcgtct tctttgctca
     1501 ctcagctcct ataccgacaa gtcgcttgta actgtgcccg ctggatctca cctgtgcggc
     1561 taattgctaa ttaccaattg ctaattactc agttaaaatc atcggcccat ttcttgttac
     1621 ggccacgcaa tgctcgaagt gtgcgctgta gctgccatct tccgtcactg cggtccattt
     1681 gtcttccagg accttggcgc cgggcctgcc gatgttcacc atcggctcaa tcgccagcac
     1741 catgccctcg cgcagccttg ttccgtggcc gcgaacacca aaattcggta cctgcggatc
     1801 ttcgtgcaac cgcgtgccga ttccgtgtcc cacaaaatcg cggaccacgc tgaagccgtt
     1861 ggcttccaca tattcctgca ctgccgcgcc cacgtcgccc acagtcttgc ccagccggac
     1921 ctccgcgatc gcgttcttca gcgactgctc cgtgacttcc agcagctttt tcagctccgg
     1981 agccagcgtc tgtcctaccg ggaccgtaat tgccgaatcc ccgtagtagc cgtccagcac
     2041 cacgccgcag tcgatcgaga cgatgtcgcc ttccttcagc acccgttttt ctgacggaat
     2101 gccgtggata atctcattgt tcactgaggt gcacagcacg caagggtaat cgtaatatcc
     2161 cttgaaggcc ggcttcgcgc ccagttcctt gatcttctct tccgccacgc gctccaggtc
     2221 catggtggaa acgcccggct taaccagcgc tttcaccgtc tccaatacct gtcggacaat
     2281 ctgcccgctg cggcgcatct tttccagttc cgaatgtgac ttgcagttaa tcattgctag
     2341 accgcgacgg cgccttcaat catggccagc gtctggtgtg tcacttcatc caccggaagc
     2401 tctccattca ccatgttcag gcagccccgt ttgcggtaat actccaccag cggccgagtc
     2461 atgtgttcat agctcttcaa ccgctcggaa atcacttctt ccttgtcgtc tttgcgctgc
     2521 actagagcgc tgccgcagga gtcacaaacg ccttcttttt caggcggctg gaagtagatg
     2581 ttgtaaattc tgccatcaac gggacacgag cgacggcccg taagccgttg cagtaattga
     2641 ttatatccca cttcgatgct gatcacaacc ggctcaacct tgcggccgtc aaaggttgtc
     2701 acctctaaaa atgaatccag ccattccgcc tgtcccaccg ttcttgggaa gccatccagg
     2761 ataaaaccgc gctggcagtc cggctgcttc aacctttctc cgaccatcgg cagcatcaac
     2821 tcgtccggga caaggttccc cgctttcatg atcgggtcag ccttcttgcc cagatcagtt
     2881 ccacgggcca cgttgatccg caggatgtct ccggtggaaa tctgcggaat gccatacctt
     2941 cccgaaacca ccattgactg tgtgcccttg cccgctcccg gcgctcccag gagaatgata
     3001 gggcccaccg ttctcgcatt gaattgtgca ctggtggcgg acacagccgg ctaccacctc
     3061 ctgcctttaa tgcgacctcc ccgggaagta aagccttcgt agtggcgcat caccagctgt
     3121 gactcaatct ggttgaccgt atccatggcc acgcccacca cgatcagcag cgatgtgccg
     3181 ccgaagtaga agttcacgcc cagcccggtc aggaaccagc tcgggaactt ctcgaaaacg
     3241 ttgccgccca gccaccatgg caggtggttc aggtggattc cggcgatcat ccattccgga
     3301 atcagcgaga tcagaatcag gtacagtccg cccaccagcg tcacgcgcgt cagcacgtca
     3361 ttgatgtagt cgcgcgtgcg gtgtcccggc cggatgcccg ggataaagcc gccatgcttc
     3421 cgcatgttgt ccgccacgtc cgccgggtta aagacaatcg aaacgtaaaa gtacgcgaag
     3481 aaaacaatgc caacggcgta gagcagcgtg tagagcggtt ctccccagcg caggccgtca
     3541 agtagccagc cgaagtagcg gttcagggtg ctgccctgct tgaacgccgc cgagtaggtc
     3601 aacatctgcg gaattgagag cagcgaagac gcgaagatca ccggcatcac accgccggag
     3661 ttcacgcgca gcggcaggtg cgtggcctgt ccgcccatga tgcgccgtcc gaccacgcgt
     3721 ttggcgtact ggaccgggat tctgcgttcc gagcgctcca taaacacgat gaatgccacc
     3781 accgcgatca tgagcgcgat cagaatgatc atcgccggga tggtgaagct gcccagccat
     3841 gcggaagtcg ccttcttgta aagatcaaag accgcgcgcg gcagtcccac cacgatgccg
     3901 gcaaaaatca gcaatgacat gccgttcccg attccgcgct ccgtgatctg ctcacccagc
     3961 cacatgatga agatactgcc cgccgtgagg gtgatcatgg tcatgatgat gaaccaggcc
     4021 ccacccgtca gcacgtagcc ctgcgtctgc agcgtaaagg caatccccat gctctgcagg
     4081 agcgagagga tcagcgtcag gtaacgcgtc cactgcgtga tcttcctgcg cccaagttcg
     4141 ccttctttct gcaaacgggc cagcggctcc caaaccaccg tgagcagctg caggatgatc
     4201 gaagaagtga tgtagggcat gatgcccagg gcaaaaatgg tcagctttcg caggttaccg
     4261 ccgctgaaca ggtcataaaa gccgagcagc ccgccgctct gctgctcaaa ggccttctgc
     4321 agcgcgtccg tgttgatgcc cggcgtggga atgtgcgagc ccaggcgata caccgcgagc
     4381 atggccagcg tgaacagcac acgcttgcgc aggtcgggca ctcggaagat gtttcccatt
     4441 ttttccagca tggagaccta ctttacttct tcttgccttt ggcttcgggc ttcttctctt
     4501 ctgccactgc ggccgcgccg ccgatcactt ccgccttgcc gcctgcctta atgatcttat
     4561 cctgcgccga tttcgaaaac ttgtgcgcct gaacgctgat cgctgatttc agttcaccat
     4621 cacccagcac cttgatcagg tcgttcttgt gcgccagccc gttcttgacc agcaattcct
     4681 gggtgatgtt cgcctcgccc aactccgcca gccgctccag gttgatggcc cggtactcgg
     4741 tgcggaaaat gttggtgaag ccgcgcttcg gtatccggcg atgcaatggc atctggccgc
     4801 cttcaaagcc gcgcatgctg cgcgaacccg agcgcgatcc ctggcccttg tggccacggg
     4861 ttgatgtctt gcccatgccg ctgcccatgc cgcgacccac acgcttgcgg ttcgcagtgg
     4921 cgcccttcgg cggacgcaat gtggaaagat tcgttggcac ttaagttccc tctgtcgcag
     4981 cggtcgattt acttctttct ccgctactcg gtttccctgt caattaatcg ccagatcgtt
     5041 cttcttgcga tccgaaatcg acaattgtca attttggcaa tcctggcaat tttggcaatt
     5101 actgaacgat ctccaccaga tgcgggatct tcgcaatcat cccgcgaatc gacggtgtgt
     5161 cttcccgctc aatcacctgg ttcaggcggg taaagcccag ccctttcacc accagcttgt
     5221 gcttcaccgg ggtgcagatc ttcgaacgta catatttgat cttgattgtt ttcttggctg
     5281 ccatgttctt acagctcctg tgcggctttg ccgcgcatgg tcgccacttc ctgtttgtcg
     5341 cgcagccggt tgagcgcgtc aaacgtggcc ttgatcacgt tatgcgggtt cgccgtgcca
     5401 attgacttgg tcagcacgtt ctgcacaccc gctgaagtca tgaccgcgcg cac
//
LOCUS       DASQYP010000045         4301 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_214373, whole genome shotgun sequence.
ACCESSION   DASQYP010000045 DASQYP010000000
VERSION     DASQYP010000045.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 4301)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4301)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4301
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_214373"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..113
                     /gene="rpmH"
                     /locus_tag="VE783_01190"
     CDS             <1..113
                     /gene="rpmH"
                     /locus_tag="VE783_01190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008650850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="50S ribosomal protein L34"
                     /protein_id="HYX52034.1"
                     /translation="KHGFRTRMKTKSGQAVLSRRRAKGRKRVSVKPGYRD"
     gene            136..516
                     /gene="rnpA"
                     /locus_tag="VE783_01195"
     CDS             136..516
                     /gene="rnpA"
                     /locus_tag="VE783_01195"
                     /EC_number="3.1.26.5"
                     /inference="COORDINATES: protein motif:HMM:NF013022.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004526 - ribonuclease P activity
                     [Evidence IEA];
                     GO_process: GO:0006396 - RNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease P protein component"
                     /protein_id="HYX52035.1"
                     /translation="MPLPAESQPSGSFPRTSRLLKHSDFQAVYKQGRKTFSGNMTAFY
                     RERNDGASARVGLAVGRVLGGAVQRNRIKRRLRAAVQPNLAELTRPLDVVLHPRKAVL
                     TMVFAELKAEVGKLFAVVEKGRGR"
     gene            513..731
                     /gene="yidD"
                     /locus_tag="VE783_01200"
     CDS             513..731
                     /gene="yidD"
                     /locus_tag="VE783_01200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012865047.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein insertion efficiency factor
                     YidD"
                     /protein_id="HYX52036.1"
                     /translation="MKTALLWLLRQYKRFISPALPAACRYVPSCSEYAQEAVARHGAL
                     RGAALSLRRLLRCHPLVRGGFDPVPKND"
     gene            744..2510
                     /gene="yidC"
                     /locus_tag="VE783_01205"
     CDS             744..2510
                     /gene="yidC"
                     /locus_tag="VE783_01205"
                     /inference="COORDINATES: protein motif:HMM:TIGR03593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0051205 - protein insertion into membrane
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein insertase YidC"
                     /protein_id="HYX52037.1"
                     /translation="MTEYHNPQEDPGAQKRMMLAFMLIFAAVFVMQLFLPKPQQPPKS
                     QQPGQQQQTSQPGPTGAATPAAAAVAKPGASATKAGPKGETKQAAAESETVLENDFYR
                     ITFTNRGALVKSWILKKYKDDKNRPLDLVNASAAGSYGNPLSLFASDKELEKKLNESL
                     YVITQGASGEVQFDFSDGDVTARKTFRPDHMYVVDVDTEVTRAGQGITVLPQWPAALG
                     DQVTAGAYAQARIDWNQNGSVERKPAFSGNFITGRKWVANGQAFNGPFSWTALVDQYF
                     SVAFMPQRPDGTQLVTFHNQIEIPRNASKPDEAKDKASVLGFALGQTNGSSKLRVFAG
                     PKAVDVLESTQAQPGGPDLRGVLDFGTFGFIAKPLFLWLKWTHEHMIPNWGWAIAFLT
                     LVITMALLPLRISSQKSMLKMQKIQPQIKAITEKYKRYSMTDPRRQDMQKEMSELYKR
                     EGVNPVGGCFPMLLQMPFLFAFYSMLGNAIELRQANWLWIHDLSATDPYHILPIAIGL
                     SMFVMQRSTPQTGMDPAQQKMMNFLGPVMLGGFSWGMPAGLCVYWAISNLLGWFQQFF
                     LNRSELAQQVRKSQERRASRKK"
     gene            2549..3070
                     /locus_tag="VE783_01210"
     CDS             2549..3070
                     /locus_tag="VE783_01210"
                     /inference="COORDINATES: protein motif:HMM:NF013583.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="R3H domain-containing nucleic acid-binding
                     protein"
                     /protein_id="HYX52038.1"
                     /translation="MLQDKVTAAKKIDALLKGLISSGGFRLKYRITVNPPAVPGQETE
                     RPEILVELAGPDSDLVLARGGELLRAFENISHEAVHLSPDEHERIAFDCRGYRAARQQ
                     ELKMAADVAAERVLRTGTPYSFAPMSSRERRLIHLKFRDHQSLTTQSEGEGGRRYVVL
                     YPRDYKPSKPARR"
     gene            3175..4014
                     /locus_tag="VE783_01215"
     CDS             3175..4014
                     /locus_tag="VE783_01215"
                     /inference="COORDINATES: protein motif:HMM:NF017970.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1003 domain-containing protein"
                     /protein_id="HYX52039.1"
                     /translation="MSTNVTMIGEVPIFQLLDDEEREALAQMMDCRDYAEGETLFNYG
                     DPGGEIFILRHGKVELSVESNDGEKIILAENEQGDVLGELSFLDGGPRTATAVARAET
                     HTLCMHRDRLMEFIDKHPHAAVDLLTVVGRRLRITDDLLRTRVSRNVNVEQEEMMTVG
                     DRIADKVASFGGSWKFIIVFCAVMLIWVILNTSALFRNHFDPYPYILLNLFLSMTAAI
                     QAPVIMMSQNRQAAKDRLNADLDYDVNLKAELEVAQLHRKLDNMYERLEEHFARIEHN
                     HQR"
     gene            4011..>4301
                     /locus_tag="VE783_01220"
     CDS             4011..>4301
                     /locus_tag="VE783_01220"
                     /inference="COORDINATES: protein motif:HMM:NF021882.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52040.1"
                     /translation="MNLDETIVAIATPPGRGGIGVVRLSGDRARSIAESMLRVRAQLE
                     PGRALFGELKEPATGERIDEVVATFFAKPHSYTADDVVEISAHGAPVVLRHVI"
BASE COUNT          934 a         1259 c         1273 g          835 t
ORIGIN      
        1 agaagcacgg cttccgcact cgcatgaaga ccaagagcgg acaggcggtt ctctcgcgcc
       61 gccgcgcgaa aggacgcaag cgggtttccg taaagcccgg atacagggat taatctcttc
      121 cggcaggtaa gtagcatgcc cctaccagct gagtcgcagc cttcgggctc gttccccagg
      181 acttcacggc tgctgaaaca ttctgatttc caggccgtat acaagcaggg taggaaaacg
      241 ttctcgggca acatgacggc cttctaccgg gaacgaaacg atggtgcatc tgcccgtgtg
      301 ggacttgcag tggggcgcgt gcttggcggg gctgtgcagc ggaacaggat caagcggcgg
      361 ctgcgtgccg ccgtccagcc caacttagcg gagctgacgc gccctctgga tgtggtcctg
      421 catccgcgca aggcagtttt aacgatggtg tttgcggagc tgaaagccga agtcgggaag
      481 ttgttcgcgg tggttgagaa aggccgggga cgatgaaaac ggcactgctc tggctgctgc
      541 gccagtacaa gcgattcatt tctccggcgt tgccggccgc ctgccgctat gttccttcct
      601 gttctgagta tgcacaggaa gcggtggcac gccacggggc gctgcgtggt gcagcgcttt
      661 ccctgcgccg gcttctccgc tgccatccat tggtgcgcgg cggctttgac cctgtaccga
      721 agaatgacta gagaccaaaa tccttgaccg aatatcacaa tcctcaagaa gatcccggcg
      781 cgcagaagcg catgatgctg gctttcatgc tgatctttgc ggccgtgttc gtgatgcagc
      841 ttttcctgcc caagccgcag caacctccca agtcacagca gccaggccaa caacagcaga
      901 catcgcaacc gggcccgacc ggggcagcaa ctcccgcagc tgcagccgtc gccaaacctg
      961 gcgcctctgc cacaaaagca ggaccaaaag gggaaaccaa acaggctgca gcggagtccg
     1021 agaccgttct tgagaatgac ttttatcgga tcaccttcac caaccgtgga gcgttggtga
     1081 agtcgtggat cttgaaaaaa tacaaggacg ataagaatcg gccgctcgac ctggtgaacg
     1141 cctccgccgc aggcagctac ggtaatcccc tttccctctt cgccagcgac aaggagctgg
     1201 aaaagaagct gaacgaatcg ctctatgtga taacgcaggg cgcatccggc gaagtccagt
     1261 tcgatttttc tgacggcgat gtgaccgcgc gtaaaacatt ccgtcctgac cacatgtacg
     1321 tggtggatgt ggacaccgag gtgacgcgcg ctggccaggg cattaccgtg cttccgcaat
     1381 ggcctgcggc cctgggcgac caggtgacag ccggagctta cgctcaggcg cgcattgact
     1441 ggaaccagaa cggcagcgtg gagcgcaagc cggctttctc cggcaacttc atcacgggac
     1501 gcaagtgggt tgcgaacggt caggctttca acgggccgtt cagctggacc gctctggtgg
     1561 atcaatattt cagcgtggcc ttcatgccgc aacggcctga tggcacccag ctggtgacat
     1621 tccacaatca gatcgaaatc ccccgcaatg caagcaagcc agacgaggcc aaagacaaag
     1681 cctcagttct cggctttgcc ctgggccaga ccaacggatc ctcaaaactg cgagttttcg
     1741 ccggtcccaa agctgtggat gtcctggaaa gtacgcaggc gcagcccggc ggacctgatc
     1801 tgcgcggtgt tctcgatttt ggaaccttcg gcttcatcgc caagccgctg ttcctctggc
     1861 tcaagtggac tcacgagcac atgattccga actggggctg ggccattgct ttcctgaccc
     1921 tggttattac catggcgctc ctgccgctgc gcatctccag ccagaaatcg atgctcaaga
     1981 tgcagaagat ccagccgcag atcaaggcga tcacggaaaa gtacaagcgc tacagcatga
     2041 ctgacccgcg ccggcaggac atgcagaagg aaatgtcaga gctctacaag cgcgaaggcg
     2101 tgaacccggt gggcggctgc ttccccatgt tgctgcagat gccgtttctg ttcgccttct
     2161 actccatgct gggcaatgcc attgagcttc ggcaggccaa ctggctatgg atccatgatc
     2221 tctccgcgac tgacccgtac catattcttc ctatcgcgat tgggttaagc atgttcgtga
     2281 tgcagcggag cacgccgcag acggggatgg atccggcgca gcagaagatg atgaacttcc
     2341 ttgggccggt gatgctcggc ggcttcagct ggggcatgcc tgccgggcta tgtgtctatt
     2401 gggccatcag caaccttctg ggctggttcc agcagttctt tctcaatcgc tcagagctgg
     2461 cgcagcaggt tcgcaaaagc caggagcgac gcgcatcacg caagaaataa gagcggtaca
     2521 gctataattt ccagtttgga cgtgactgat gcttcaggac aaggttaccg cggcaaagaa
     2581 gattgatgcg ctgctcaaag ggctgatcag ctcgggtggc ttccgcctga agtaccggat
     2641 caccgtgaac cctcccgcgg tacccggcca ggagacggaa cggccggaga tcctggtgga
     2701 gcttgccggc ccggatagcg acctggtgct ggcacgcggc ggcgaactcc tccgcgcttt
     2761 tgagaacatc tctcacgaag ctgtacatct ttcgccagac gaacacgagc gtattgcctt
     2821 tgactgccgg ggctaccggg cagcccgcca gcaggaactc aagatggccg ctgacgtagc
     2881 agcagaaagg gtcctgcgca ccggcactcc ctactcattt gcgcctatgt catcccgcga
     2941 acgccgcctg atccatctca aattccgcga tcaccagtca ctgacgacgc agagtgaagg
     3001 ggagggcgga cggcgctacg tggtgctcta tccacgggat tacaagccga gcaaaccggc
     3061 gcggcggtaa gagtctattc gcaaagttat ctcaacaggc acagcgcacc tgcattagac
     3121 ttactcacgg gcgcgagccc aagctgtacc agaccaactc ctgagagccc ctgcatgtct
     3181 accaacgtca ccatgattgg cgaagtgcca atcttccaac tgctcgacga tgaagaacgc
     3241 gaagccctgg cccagatgat ggactgccgc gattacgctg aaggggaaac gctgtttaat
     3301 tatggcgacc ccggcggcga gatcttcatc ctgcgccacg ggaaagtgga gctctccgtc
     3361 gagagcaatg atggcgagaa gattatcctg gcggaaaacg aacaaggtga cgtgctggga
     3421 gaactatcat tcctggatgg ggggccaaga acggccacag cggtagcccg cgcggagacc
     3481 catacgctct gcatgcatcg cgaccgcctg atggaattca tcgataagca cccgcatgcc
     3541 gcggtggacc tgctgacggt cgtcggccgc cggctgagaa tcactgacga tctgctgcgt
     3601 acccgcgtct cccgcaacgt aaacgtggaa caagaagaaa tgatgactgt cggagatcgc
     3661 atcgctgaca aagtggccag ctttggcggt tcgtggaagt tcattatcgt attctgcgcg
     3721 gtcatgctga tctgggtcat cctgaatacc agcgcactct tccggaacca tttcgatccg
     3781 tatccgtata tcctgttgaa cctttttttg tcgatgaccg cggccattca ggcgcccgtg
     3841 atcatgatgt cgcagaaccg gcaggcagcg aaagacaggc tgaacgcgga cctggattat
     3901 gacgtaaacc tgaaagccga gcttgaggtg gcgcagctcc accgcaagct ggacaatatg
     3961 tacgaacgcc tggaagagca tttcgcgcgc attgagcaca atcatcagcg gtgaatctgg
     4021 acgaaacgat cgtcgccatt gcaactccgc cggggcgcgg cggcatcggt gtggtgcggc
     4081 tctccggcga tcgcgccagg agcatcgcgg aatccatgct gcgcgtgcgg gcccagcttg
     4141 aaccgggacg cgcgcttttc ggcgagttga aagagccggc gacaggcgag cgcattgatg
     4201 aagtggtggc gaccttcttc gccaagccgc actcctacac cgccgacgac gtggtggaaa
     4261 tttctgctca tggcgcgccg gtggttctgc ggcacgttat t
//
LOCUS       DASQYP010000046         2963 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_107231, whole genome shotgun sequence.
ACCESSION   DASQYP010000046 DASQYP010000000
VERSION     DASQYP010000046.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 2963)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2963)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2963
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_107231"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..905
                     /locus_tag="VE783_01225"
     CDS             <1..905
                     /locus_tag="VE783_01225"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52041.1"
                     /translation="SIAKAPEVAGRPEQVAVQAATASAHKQLEYVRFQPRHLVMHACM
                     VLSFITLALTGLSLKFSYTGWAAKLSRILGGFETAGFIHRSAAVLMFSVFVAHLYDIV
                     RAKKSQGKPWGEMLFGKDSLLLNKQDLREFFGTMKWFLSLGPRPRYGRWTYWEKFDYF
                     AVFWGIFVIGSTGLTLWFPILFTRLLPGWFINVATIIHSDEALLATGFIFTIHFFNTH
                     LRPEKFPMDVTVFTGHMQLAELKRDKPREYEELLASGRLEEHLAEPHQPVVVKTVRFF
                     AWIALATGFSIVVWIIYAMIFAYR"
     gene            1061..2533
                     /locus_tag="VE783_01230"
     CDS             1061..2533
                     /locus_tag="VE783_01230"
                     /inference="COORDINATES: protein motif:HMM:NF015237.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NapC/NirT family cytochrome c"
                     /protein_id="HYX52042.1"
                     /translation="MRSVRHWLRPLVFLSNNVLSLAGVVIVTTATLLWLYFLQITLRG
                     GVPHPYLGIVIYMLIPALFLLGLILIPIGIWWNRRGKIRKGEMPAEFPPLDPSNPDLR
                     RLAGFVTVTTVLNIIITMQFTYSAVNYMDSVSFCGQTCHTVMRPEFTAHQQSPHSKVE
                     CVNCHIGPGASWFVKSKLSGAGQLVAVALNNYPRPIPVPVRNLRPARETCETCHWPQK
                     FDEDRLRDIVTYGSDEQNTQTHTVLMLHLGGGHSRIGIHGRHVGEGITVRYYASDDKR
                     ENIPWVEYTAGGQTTVFAASGASKPDESKLRTMDCIDCHNRPTHIYLLPERAIDQAIA
                     AGDISPTLPFVKKTAVSILKQQYASSQDADATIPAAFENFYKDKYAQIYADRRGDISR
                     AAQAVKAAFDHNVFPEMKVGWGTYANNLGHTDFTGCFRCHDESHTSTNGKAITQDCSA
                     CHNLLASDEKNPKILVDLGLEKASPEPAKQGGEKKAGGSK"
     gene            complement(2585..>2963)
                     /locus_tag="VE783_01235"
     CDS             complement(2585..>2963)
                     /locus_tag="VE783_01235"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52043.1"
                     /translation="GSMWVDPIARHLTKIEGQLFEDVTFGWGFLARLNKGGTFKVIQK
                     DVGDGHWDVTSLDVSMNGHAILFKTIVARQREIKSDYRRVPDNLSIAQAYTLLEKGDA
                     FNAEGSTHSAASHQSQGQASGQK"
BASE COUNT          638 a          824 c          832 g          669 t
ORIGIN      
        1 cgtcgattgc caaagcaccg gaagtggcgg gccgcccaga gcaggttgct gtgcaggctg
       61 caacggccag cgctcataag caacttgagt atgtgcgctt tcagccgcgg cacctggtga
      121 tgcacgcatg tatggtgctt agctttatta ctcttgctct caccggtctt tctttgaagt
      181 tttcctatac cggatgggcc gccaagctct cccgtatcct gggtggcttt gaaacggcag
      241 gcttcattca ccgtagtgca gcagtactga tgttcagcgt gttcgttgcg catctctacg
      301 acatagtgcg ggcgaaaaag agccagggaa agccctgggg ggagatgttg ttcggaaaag
      361 acagcttgct tctcaacaag caggacctca gggagttctt cggcaccatg aagtggttcc
      421 tgagccttgg gccacgtcca cgctacgggc gctggaccta ttgggagaag tttgactact
      481 tcgccgtgtt ttggggcatt ttcgtgatcg gctcaaccgg gctcacgctc tggttcccga
      541 tcctctttac ccgcttgctg cccggctggt tcatcaacgt agctacaatt atccacagcg
      601 atgaagccct gctggctacc ggatttattt tcactatcca tttcttcaac acgcaccttc
      661 gtcccgagaa attccccatg gacgtaacgg tgttcaccgg acatatgcag ctggcggagc
      721 tcaagcgcga taagccgcgc gagtatgaag agttgctggc gagcgggagg ctggaagagc
      781 acctggctga acctcaccag ccggtcgtag taaaaactgt gcggttcttt gcctggatcg
      841 cgctggccac aggcttcagc attgtggtat ggatcatcta cgccatgatc ttcgcctatc
      901 gctaaaacga atccatcgcg ctacgagcct tgagcttcct tttgcctggg tgccgggctc
      961 ctctatcatg tcagcgcttt gcttgtgatt gatatcacag tagccgggtg cgctgtttca
     1021 cgataatcag agttcttgtt cgaggaaggg gaaacgaccc atgcgcagcg ttcgccattg
     1081 gcttagaccg ctggtttttc tctcaaacaa cgtcctgagc cttgccggtg tagtgattgt
     1141 gaccacagcc acgctgctgt ggctttattt cctgcagatt acgctacgtg gcggagtccc
     1201 gcatccttac ctcggaattg tgatttacat gctgattccg gccctgtttc ttctgggcct
     1261 gattctcatt cccattggaa tctggtggaa ccggcgcggc aagatccgca aaggagagat
     1321 gccggccgag tttccgccgc tggatccatc gaatcccgac ctccggcggc tcgccggttt
     1381 cgtgaccgtc accacggtac tgaacatcat catcaccatg cagttcactt acagcgccgt
     1441 gaactacatg gacagcgtga gcttttgtgg ccagacctgc cacaccgtga tgaggccgga
     1501 gtttacggcc catcagcagt cgccccactc gaaggtggag tgcgtgaatt gtcatatcgg
     1561 gccgggagct tcctggttcg taaagagtaa actttccggc gcggggcagc ttgttgcggt
     1621 ggcattgaat aactatccgc ggcccatccc cgtacccgtg cgaaacttgc gcccggcacg
     1681 cgaaacctgt gagacctgcc actggccaca gaagttcgac gaagaccggc ttcgcgatat
     1741 tgtgacctac ggttccgacg agcagaatac ccaaacccat accgtgctga tgctgcatct
     1801 tgggggtgga catagccgga tcggcatcca cggacgccac gtcggagagg gcataacggt
     1861 tcgctattac gccagtgatg ataaacgcga gaacatccca tgggtggagt acaccgcggg
     1921 tggccaaacc actgtcttcg ctgccagcgg ggcttcaaag cccgacgaat cgaagctgag
     1981 gacgatggac tgcatcgatt gccacaatcg gccgacccat atttatctct tgccggaacg
     2041 ggcgattgat caggcgatcg cagctggaga catttcaccc actcttccat ttgtgaagaa
     2101 gacggcggtc tccatcctga agcagcagta tgcaagcagc caggatgctg acgcgacgat
     2161 tccggcagca ttcgaaaact tctacaagga caaatacgcc cagatttacg ccgatcggcg
     2221 cggggacatc agccgtgctg cccaggccgt gaaagccgcg ttcgaccaca acgtcttccc
     2281 ggagatgaaa gtaggctggg gtacgtatgc aaacaacctc ggccataccg acttcaccgg
     2341 ctgcttccgc tgccatgatg aatcccatac ttcaacaaac ggcaaagcaa tcacacagga
     2401 ctgcagcgcc tgccataatc tgcttgcttc agacgagaag aacccgaaga ttctggtaga
     2461 ccttgggttg gaaaaggcgt caccggaacc agccaagcag ggaggagaaa agaaagccgg
     2521 gggcagcaag tagacgagtg aggtagtcgg acttttcaga gcgcctgccc gtatggtggg
     2581 cgctttattt ttgtccggag gcctgtccct gagattggtg actcgcggcg gaatgagtag
     2641 atccttccgc attgaacgca tcacctttct ccagcagggt ataggcctgg gcgatactca
     2701 ggttatcggg aacgcggcga tagtcggact tgatctcgcg ctggcgggcc acaatggttt
     2761 tgaagagaat cgcatggcca ttcatgctta cgtccaggga ggtaacatcc cagtgaccgt
     2821 cgccgacatc cttttggata actttgaaag tcccgccttt gtttaagcga gcaaggaagc
     2881 cccagccgaa agtgacgtct tcaaagagct ggccttcgat tttggtcagg tggcgcgcga
     2941 ttgggtcaac ccacatggag ccg
//
LOCUS       DASQYP010000047        10839 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_255582, whole genome shotgun sequence.
ACCESSION   DASQYP010000047 DASQYP010000000
VERSION     DASQYP010000047.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 10839)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10839)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10839
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_255582"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            382..870
                     /locus_tag="VE783_01240"
     CDS             382..870
                     /locus_tag="VE783_01240"
                     /inference="COORDINATES: protein motif:HMM:NF013923.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(2Fe-2S)-binding protein"
                     /protein_id="HYX52044.1"
                     /translation="MKKISVNVNGTTHQSEVEPRLLLVHYLRDVLGLTGTHVGCETSL
                     CGACTVMVDGQAVKSCTMLAAQADGSSVTTVEGLAASGQLHPVQQAFWEHHGLQCGYC
                     TPGMIMATAQILARNPDPSEEEIRHGLEGNLCRCTGYQHIVQAVQCAAKKMKGKTAVA
                     AR"
     gene            1157..3568
                     /locus_tag="VE783_01245"
     CDS             1157..3568
                     /locus_tag="VE783_01245"
                     /inference="COORDINATES: protein motif:HMM:NF042649.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043546 - molybdopterin cofactor binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase family protein
                     molybdopterin-binding subunit"
                     /protein_id="HYX52045.1"
                     /translation="MAERFVGKSVKRTEDPRMIQGLAHYVDDIKLPDTLHAAFLRSIH
                     AHARIKSIDVGEAQKLPGVVAVYTGKDIAQKLGPVPCGAAIPDMKVPDHRVLATDKVY
                     WVGHPVAVVVATSKYIARDAVDLIQVDYDELPAVVDEEKAADPKSPVIHEKLGSNIAY
                     KLTAGEGDIEAALKSADKVVKQKILHRRLAPIPMEPRGVLARYYPGEQELTLWTSTQI
                     PHLARTQVSLMLGMPENKLRLIAPEVGGGFGSKLNVYAEEAVLGYCSMQLGKPVKWIE
                     GRRENIQGTIHGRGQTGYIEIGCKKDGTITGFRYNVFADMGSYFQLLTPAIPTLTGLM
                     LSGCYKIPAIQMNVTATFTNKMSTDAYRGAGRPEATYVIERAMDLVAAELKMDVVEVR
                     RRNFPAPFDNNSFKTATGLFYDSGNYQGALDKALKMADYTKLRDEQQKARSEGRLLGI
                     GVSTYVEICAMGPSPALPAGGWESATVRIEPTGKVTVLTGASPHGQGQETSFAQIVAD
                     ELGVDVNDVTVIHGDTAIVQYGIGTFGSRATAVGGTAVYMATQKLKEKASKLAAHLLA
                     CENVNFASGKFHESAGKAKAATVPEPVVPVGQAPGASLPEPHPSGKHVTIQEVALAAH
                     LAKNMPPDMEPGLSATTFFEPKNFTFPFGTHICVVEVDRETGEIHIQRYIAVDDCGNQ
                     INPLLVHGQVHGGIVQSLGQALYEEVVYDENGQLVSGSLMDYAVPRASMIPWFELDST
                     VTPSPVNPLGVKGVGEAGSIGATPAIVAAVVDALAPFGVTHLDMPIKPENLWRIISSG
                     KAGAA"
     gene            3585..4448
                     /locus_tag="VE783_01250"
     CDS             3585..4448
                     /locus_tag="VE783_01250"
                     /inference="COORDINATES: protein motif:HMM:NF013134.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase family protein subunit M"
                     /protein_id="HYX52046.1"
                     /translation="MIPANFDYVTVKSLDEALSLLAKHKDDAKILAGGHSLLPAMKLR
                     LAQPSLLIDLSRVKDLSYIREEGGTVKIGAMTTHFQIESSELLKRICPLLNETATHLG
                     DMQVRNKGTMGGSLAHADPAADWPAAVLALGAEMVAVSPKGERVIKAEDFFVEMMTSA
                     LEPGEILKEIRFAAPKGKFGQAYVKFRHPASGFAVVGIAVNLAAEGSKCGSCAVGVTG
                     VASKPYRAKGVESAMKGAALDGKMMAAAADHVADGVRANTDLFASGEYRKHLAQVYTR
                     RALEMAAGRAK"
     gene            complement(5115..6548)
                     /locus_tag="VE783_01255"
     CDS             complement(5115..6548)
                     /locus_tag="VE783_01255"
                     /EC_number="6.3.4.21"
                     /inference="COORDINATES: protein motif:HMM:NF006629.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004514 - nicotinate-nucleotide
                     diphosphorylase (carboxylating) activity [Evidence IEA];
                     GO_process: GO:0009435 - NAD biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinate phosphoribosyltransferase"
                     /protein_id="HYX52047.1"
                     /translation="MRPFHAMLRTERQNLVLQTDSYKFTHWKQYPPGTEYVYSYLESR
                     GGMFGQVVFFGLQYYLLRYLQGSVVNAEDVAEAQRFVDQHLGPGMFNHKGWMHIVERH
                     GGRLPVAIKSVQEGSIVDVRNVLMTIENTDPVCYWLPNYLETLLLKVWYPITVATLSR
                     AIRRVFLTALERSGDPSLIDFKLHDFGYRGVSSEETAGIGAAAHLINFKGTDTVAGIR
                     ILQEYYSSQQMEGFSVPAAEHSTITSWGREHEADAYRNMLHSFPQGIVAVVSDSYNVY
                     DAAQKLWGGILRDEVLKREGTLVVRPDSGNPREVVLKVLDILGERFGYELNPKGYRVL
                     NPHVRVIQGDGVNYWTIQDTLMAMNRAGWSADNITFGMGGALLQQLNRDTQKFAFKSS
                     SITVSGRDRDVFKDPVEGHDKMSKRGRLALRFREGKWSTDRIDRGAAPKDDLLRPVFR
                     DGEILAQHTVADIRERANTQEQVELAK"
     gene            complement(6603..10550)
                     /locus_tag="VE783_01260"
     CDS             complement(6603..10550)
                     /locus_tag="VE783_01260"
                     /inference="COORDINATES: protein motif:HMM:NF016260.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translocation/assembly module TamB
                     domain-containing protein"
                     /protein_id="HYX52048.1"
                     /translation="MNWNWKKIILWAVIAVFVLVIGIGLTAVLLVQHNSGFRGYLLAK
                     VESSVKESTGATLQVRDFGLRLSTLTLDMYGIVVHGTEPASAPPLLQADHLGVGVTID
                     SVLQRKFHFRAIEVNHPVVSVRVNTAGENNLPKPEKKSTSSSNTNVFDLGIRQLLLDH
                     GEIYYNDQKTPLSANLRNLELTAGYDPGPKRYQGHLQYEDGHIQYGHYAPLPHNMDAG
                     FALTPQRFVLDRMVLGLGQSQVVLNATVDDYSNNPNVQANYQASLVTGELAAVLKNPS
                     VPEGTVRLTGTAQYQGKPGEPALNSAVVRGMVSSPELYVKTSSVHTAIRNLSAKYELE
                     HGNATVENMRAELLGGRFQGKLALLDVAGNGQGRLQASLKDVSLDVLQKIAQANSLRE
                     AHLVGNLNADAQVSWIKSISNLTASANATLQAAIGQNPSTPIDGVIHADYSAARQEVA
                     LHQSYIKTPKTSINLDGKVSELSQLQIRMHSDDLHEIETVAANFKTASASGTPQRLDL
                     FGTADFVGSVSGSTKNPSIQGQFSANNLRVKGSSWRLVRTNINASPSQATLSNGELLS
                     ATQGRFTFTVHTGLREWAYTPNSPITVQLNASQVSIADLERLANKTYPVSGTLAMNVS
                     LHGSQQNPVGNGTLTVTNAKVSNETVQSLNLNFKGDGNAVNTKLQIKMPAGTTEATGV
                     IYPRTQAYELKVTGNNIRLEKLQAVAAKNLQIAGAIDINAQGKGTLKNPQLSASIDIP
                     QLQVQKQTIQRIKFQTTVQNHVANFALDSAVAQTYVKGRGTVGLNAPYPSDVHLDTGR
                     IAFAPLLALYAPAQAGDVGGETELHVSLRGPLAEKNRLEAHLEIPVLVANYKEVKLAA
                     ARPIHLDYQSGIAVLQPTSIQGTGTDVRMQGSVPVNNLKAATFLLQGTVDLSIAKMVQ
                     PDIISKGQIQFDIDSRRYSAGSNLNGQLKIVNASFHTPASPVGLDNANGVISVTRQRL
                     EIASFQGQVGGGTVTARGGVAFSPAVQFDLAMSAKQIRLRYPEGLRTIIDSNLAYTGN
                     LQASTVTGAVTVDHMSLTPEFDLSSFTDQFSGSGGGAPSSPFEQSIKLNIAVQSSSQM
                     DLASSQVSIQGNANLRVTGTAAQPVILGRTNLTGGELFLAGNRYIIQQGTIEFLNPVR
                     TEPVVNLQVRTTINEYNISLNIQGPVERLHTNFTSDPALPPVDIINLIARGQTTEAAA
                     ASQGQPLALGAQSALASAVSGQVSNRIAKVAGISHLSVDPALGGNGQDPGARISIQQR
                     VTSNMYLTFATDVTSTQRQAIELEYRLNRRWSLQGVRDQNGGFGVDAHYTKEY"
     gene            complement(10561..>10839)
                     /locus_tag="VE783_01265"
     CDS             complement(10561..>10839)
                     /locus_tag="VE783_01265"
                     /inference="COORDINATES: protein motif:HMM:NF013283.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0019867 - outer membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="BamA/TamA family outer membrane protein"
                     /protein_id="HYX52049.1"
                     /translation="TVPVGGPQLLILNSELRFPSSLLNKLGGVVFYDGGNVYSHLGKP
                     WDGYSNTIGIGARYATPVGPVRFDIGRNLNPVTGVSAWQYFITLGQAF"
BASE COUNT         2196 a         3015 c         3392 g         2236 t
ORIGIN      
        1 ggggggatga agatcgccgt gatcgccgga atcgcgcgtc atcgccgtaa tcggaaaagc
       61 aaaacatagc ttgcatgtag cgcagcacaa tagggattgg gaatctggtg ccctcgggga
      121 tgcgtggagg taagtgcttt ggaatcctag ttgaggtagg gggtaccccc tccctatcgc
      181 cgaaatggcc gggaatcgcg ggtcatcgcc gtgatcgccg tagtcggaaa aaccaacgcg
      241 ctttgccgtg aggatagaac gacttggaac cagccggcat tgcatgcact ggccgtgatg
      301 tagaggatgg gagcggtcgg gcatgaactc aggaaaaggt ttagaatgct ttcgctttgc
      361 ggagtgaggc tgaggtaaac gatgaagaaa atcagtgtga acgtgaacgg gaccacgcac
      421 caaagtgaag ttgagccgcg gctgctgctg gtgcactacc tgagagacgt gctggggctg
      481 accggcacgc atgtgggctg cgaaacctca ctctgcgggg cgtgcaccgt aatggtggac
      541 ggccaggcgg tgaagagctg caccatgctg gccgcacagg ccgatggctc cagcgtgact
      601 accgtggaag ggctggcggc gagtgggcag ctgcatccgg tgcagcaggc tttctgggag
      661 caccacggat tgcagtgcgg atattgcacg ccggggatga tcatggcgac ggcgcagatc
      721 ctggcgcgca atcccgatcc cagcgaagaa gagattcggc atgggctgga gggcaatttg
      781 tgcagatgca cgggatacca gcacattgtc caggcggtgc agtgcgcggc gaagaagatg
      841 aagggcaaga cggcggtggc ggcaaggtga tttcttcttc catgtcgctc cgctacgctg
      901 cgcgacggcc tacggcgtgc ggaaggttct tttggcaacg ctacccagcc cttatccctc
      961 agctcgcttt gctcgcctcg ggaacggact gggctaactt atgccgcgcc ttacggcgct
     1021 ggagtataga gatttgaaaa gacttggcag ctcccgttgg caggactcaa caggatggta
     1081 cggggctaag tgcttaccgc tgaatgcttg tcagcgctgg gaacaatgag ttcttaaaga
     1141 aacacacgag ggcatcatgg cagaacggtt tgtcggaaaa agcgtaaagc gcaccgaaga
     1201 tccccggatg atccaggggc tggcccatta tgttgatgac atcaagctgc cggacacgct
     1261 gcatgcggcg tttctgcgtt ccatccacgc gcacgcgcgg atcaagagca ttgacgtggg
     1321 cgaggcgcag aagctgcccg gcgtggtggc cgtgtatacc ggcaaggaca ttgcgcagaa
     1381 gctgggcccg gtgccgtgcg gcgcggccat tccggacatg aaagttccgg accatcgcgt
     1441 gctcgccacc gataaggtct attgggttgg gcatccggtg gcggtggtgg tcgcgacgag
     1501 caagtacatc gcgcgcgatg cggtggacct gatccaggtg gactatgacg agctgcccgc
     1561 agtcgtggat gaggagaagg ctgccgatcc aaagagcccg gtgatccatg aaaagctggg
     1621 ctccaacatt gcctacaagc tgaccgcggg tgagggcgat attgaagcgg cgctgaagtc
     1681 ggcagacaaa gtggtgaagc agaagatcct gcataggcga ctggcgccga ttccgatgga
     1741 gccgcgcggc gtgctggcgc gctactatcc gggcgaacag gagctcacgc tctggacatc
     1801 gacgcagatt ccgcatctgg cgcgcacgca ggtatcactg atgctgggca tgccggaaaa
     1861 caagctgcgc ctgattgccc cggaagtggg cggcggattt ggctccaagc tcaacgtgta
     1921 tgcggaagag gcggtgctgg gctattgctc catgcagctg ggcaagccgg tgaagtggat
     1981 tgaaggccgg cgcgaaaata tacaaggcac catccatggc cgcggacaga ccggctacat
     2041 tgagattggc tgcaagaaag atggaacgat caccggcttc cgctacaacg tgtttgccga
     2101 catgggatcg tacttccagc tgctgacccc ggcgattccg acgctcacgg gcctgatgct
     2161 ttccggctgc tacaagatcc cggcgatcca gatgaacgtg acagcgacgt ttaccaacaa
     2221 gatgtcaact gacgcatacc gcggcgcagg acgcccggaa gcaacctacg tgattgaacg
     2281 cgccatggac ctggtggccg ccgaactgaa gatggatgtg gtggaggtgc ggcgcaggaa
     2341 tttccctgct ccgtttgaca acaactcatt caagaccgcg accggccttt tctatgacag
     2401 cggcaattat cagggcgcgc tggataaagc gctgaagatg gccgattaca ccaagctgcg
     2461 cgacgagcaa caaaaagccc gcagcgaagg ccggctattg ggcattggag tatctactta
     2521 tgtggagatt tgcgccatgg gaccttctcc ggcgctgccc gcgggcggat gggaatctgc
     2581 cacggtacgc attgagccca ccgggaaagt tacggtgctg accggagctt ctccgcacgg
     2641 acaaggccag gaaacttcgt tcgctcagat cgtggccgac gagcttggcg tggacgtgaa
     2701 tgacgtgacg gtgatccacg gcgataccgc gattgtgcaa tacggcattg gcacatttgg
     2761 cagccgagcc acagccgtgg gcggaacggc ggtgtatatg gccacgcaaa agctgaaaga
     2821 aaaagcctca aagctggccg cgcacctgct ggcgtgcgag aacgtgaact ttgccagcgg
     2881 taaatttcac gagagtgcgg gcaaggccaa ggcggccacg gttccggagc cggtggtgcc
     2941 ggttgggcag gctcccggcg cgtcattgcc ggaaccgcat ccctcaggca agcacgtcac
     3001 cattcaggaa gtggcgctgg ccgcgcacct ggccaagaac atgcctccgg acatggaacc
     3061 tgggctatcc gcaaccacat tctttgaacc gaagaatttt accttcccgt tcgggacgca
     3121 catttgcgtg gtggaagtcg atcgcgagac cggcgagatt catatccagc gctacatcgc
     3181 ggtagatgat tgcggcaatc agatcaaccc gctgctcgtt catggacaag tccatggcgg
     3241 aatcgtgcag tcgctggggc aggcgctcta tgaagaagtg gtgtatgacg agaatggcca
     3301 gctggtgagc gggtcgctga tggattacgc cgtgccgcgc gcttcgatga ttccgtggtt
     3361 tgagctcgac agcacagtga cgccttcacc ggtgaacccg ctaggcgtga aaggcgtggg
     3421 cgaagccggc agcattggcg cgaccccggc gattgtagcc gcagtggttg acgcgcttgc
     3481 gccattcggc gtgacacacc tggacatgcc gatcaagcca gagaacctgt ggcgcattat
     3541 cagcagcggc aaagcgggcg cagcataatt taaggagacg agaaatgatt ccggcaaatt
     3601 tcgattacgt gacggtgaag agcctggacg aagcactctc tctcctggcc aaacataaag
     3661 acgacgccaa gatcctggcc ggcgggcata gcctgctgcc agcgatgaag ctgcgcctgg
     3721 cgcaacccag cctgctgatt gacctgagtc gggtgaagga cctttcttac atccgcgaag
     3781 agggcggcac ggtgaagatc ggagcaatga ctacgcactt ccagatcgag agctctgagc
     3841 tgctgaagcg catctgcccg ctgctgaacg agactgccac gcatctgggc gatatgcagg
     3901 ttcgcaacaa aggcaccatg ggcggcagcc tggcccatgc cgatcccgcg gccgactggc
     3961 ccgcggcggt gctggcgctg ggcgcggaga tggttgccgt gagccccaaa ggcgagcgcg
     4021 tgatcaaggc tgaagatttt tttgtggaaa tgatgaccag cgcgctggag ccgggcgaga
     4081 tcctgaaaga gattcgcttt gccgcgccga aaggcaagtt cggccaggct tatgtaaagt
     4141 tccgccatcc ggcttcagga tttgcggtgg tgggaatcgc ggtgaatctg gcggcagagg
     4201 gctccaagtg cggctcgtgc gccgttggag tgaccggagt ggcgtcgaag ccgtatcgcg
     4261 cgaagggagt tgagtcggcg atgaaaggcg cggcgctgga tgggaagatg atggcagcgg
     4321 cggccgacca tgtggctgat ggcgttcgtg cgaataccga tctctttgcg tccggcgaat
     4381 atcgcaaaca cctggcgcag gtatatacgc gtcgggcgct ggagatggcg gcggggagag
     4441 cgaagtagca aacggctaag cacgaagtcg caatgaacgg ggcgttctca aacgagcatg
     4501 aaatgacttt tcttttgtcg ctgcgctttg tttcggtcgc tccgctgcgc tgcgctttgt
     4561 ttcggtcgct gcgctgcgcg accggccaca ggcgtaagga agaggtcttt tcttaccgct
     4621 tcccccggtt tcggcgctgc gcgccttcac cgggggctaa gctcacttcg cgcctacggc
     4681 gctcgggatc ccgcatgtga caggacctta gtggctcccg gttgcattta cgagagagga
     4741 acacgaagga tcacgaattt cttagccaga gacttcccag gaggtcaccg caaacagtgg
     4801 gggttggttc ttggaaaact gaatattgat caaaacctgc cgggaatttg taggaacgaa
     4861 ccacagtcgt ctaacgggat cccacacgag ggcgtgaaaa gagctttgca ggctcacgct
     4921 cgacggcagc ggagccggtc cctcacacac cttccattcg gtcggtctcg gttcgggatg
     4981 ggtccttcag agggggtgga ctcccggcga tcgatgagcg tgaatgaaga aaggctcttt
     5041 tcagagcaga ggccacggag gatcacagag gcgaaccttc gtgttcccct gtgtcctctg
     5101 tggtaaagag atgcctactt cgccagttcc acctgctcct gcgtgttggc gcgctcgcgg
     5161 atatctgcca ccgtgtgctg cgcgaggatt tctccgtcgc ggaacacagg gcgcagcagg
     5221 tcgtctttcg gtgccgctcc gcggtcaatg cggtcggtgg accactttcc ttcgcggaaa
     5281 cgcagcgcaa gccggccgcg cttggacatc ttgtcatggc cttctaccgg atctttgaac
     5341 acgtcacgat cgcggccgct cacggtaatg ctggaggact tgaaggcgaa cttctgcgtg
     5401 tcgcgattga gctgctgaag gagcgcgccg cccatgccga aggtgatgtt gtcggccgac
     5461 cagccggcgc ggttcatggc catgagggtg tcctggatgg tccaataatt cacgccgtcg
     5521 ccctggatga cgcgcacgtg cgggttcagc acgcgatagc ctttggggtt cagttcgtag
     5581 ccgaagcgct ctccgaggat gtcgagaact ttgagcacga cttcgcgtgg attgccggag
     5641 tcgggacgga cgaccagcgt gccttcgcgc ttgagtactt catcgcgaag aatgccgccc
     5701 cagagtttct gtgctgcgtc gtagacgttg taggagtcgc tcaccacggc cacgattccc
     5761 tgcggaaacg agtggagcat gttgcggtac gcgtcggctt cgtgctcgcg tccccaggag
     5821 gtgatggtgg aatgctcggc ggcgggtacg ctgaaacctt ccatctgctg cgacgagtag
     5881 tattcctgca gaatgcggat gccggcgaca gtgtcagtgc ccttgaaatt aatcaggtgc
     5941 gcggcggcgc cgatgccggc tgtctcttcg ctggagacgc cgcgataacc gaagtcgtgc
     6001 agcttgaagt cgatcaaact ggggtcgccc gagcgttcca gcgcggtcag gaagacgcga
     6061 cggatcgcgc gcgaaagagt ggcaacggtg atgggatacc agactttcag cagcagcgtt
     6121 tcgaggtaat tcggcagcca gtagcagacc ggatcggtgt tctcgatggt catgagcacg
     6181 ttgcgcacgt caacgatgct gccttcttgt actgacttga tcgcgacagg caggcggccg
     6241 ccgtggcgct ccacgatgtg catccagcct ttgtggttga acatgccggg gccgaggtgc
     6301 tggtcaacga agcgctgcgc ctcagcaaca tcttcggcgt ttaccactga gccctgaaga
     6361 tagcgcagca ggtagtattg caggccaaag aaaaccacct ggccgaacat gccgccgcgc
     6421 gattcaaggt agctgtagac gtattcggtg ccgggtgggt actgcttcca gtgcgtgaac
     6481 ttgtagctgt cggtttggag aaccaggttc tgccgctcgg tcctgagcat cgcatggaat
     6541 ggtctcatgc gatgcttgcg gcgcgcaata cgtgtttgcc gcgcggcggt aagcgatccg
     6601 cgctagtact ccttggtgta atgcgcgtcc acgccgaagc cgccgttctg gtcgcgtaca
     6661 ccctgcaatg accagcggcg attcaagcgg tactcaagct cgatcgcctg gcgttgcgtg
     6721 gaggttacgt ccgtggcgaa ggtgagatac atgttgctgg tgacgcgctg ctggatggaa
     6781 atgcgcgctc cgggatcctg gccattgccg ccgagcgcgg ggtccaccga cagatgcgag
     6841 ataccggcga ccttggcgat ccggttgctt acctgtccgc tcacggctga agccagagcc
     6901 gactgagctc caagcgcaag tggctggccc tgcgatgccg ctgcggcttc cgtcgtctgg
     6961 ccgcgcgcga tcaggttgat gatgtccact ggaggcagcg cgggatcaga ggtgaagttt
     7021 gtatgcagtc gctccactgg accctggatg ttcagcgaga tgttgtactc gttaatagtg
     7081 gtccgcacct gcaggttcac gactggctcg gtgcgcaccg gattcaggaa ctcaatggtt
     7141 ccctgctgga tgatatagcg gtttcccgcg aggaacagtt cgccgccggt caggttggtg
     7201 cggccaagaa ttaccggctg tgccgctgtg ccggtaaccc gcagattggc attcccttga
     7261 atgctcacct ggctgctggc cagatccatt tgcgaagaag attgcaccgc gatgttgagc
     7321 ttgatgcttt gctcaaacgg agaagaaggc gctccaccgc cgctgccgct gaactgatca
     7381 gtgaagctgc tcaggtcaaa ctctggcgtg agcgacatgt gatccacagt cacggcgccc
     7441 gtcacggtgg aagcttgcag gttgccggtg taagcgaggt tcgaatcgat gatcgtacgc
     7501 agaccttcgg gatagcgcag acgaatctgc ttggccgaca ttgccaggtc aaactgcacg
     7561 gccggactga acgcgacgcc gcctctggcc gtcaccgttc cgccacccac ctggccctgg
     7621 aaactcgcga tctccagccg ttgccgcgtc acgctaatga cgccgttcgc gttgtcgagc
     7681 ccgactgggg aagcaggcgt atggaagctg gcatttacga tctttagttg cccattgagg
     7741 tttgatccgg cggaatagcg ccgcgagtcg atgtcaaact ggatctggcc tttgctaatg
     7801 atatcgggct gcaccatttt ggcgatgctg aggtcaacgg ttccctgcaa cagaaaggta
     7861 gctgccttca ggttgttcac cgggacgcta ccctgcatgc gaacgtcagt cccggtgccc
     7921 tggatgctgg tgggctgcag caccgcgata ccactctggt aatcaaggtg aatcggacgc
     7981 gcggccgcga gcttcacctc tttgtaattt gccacgagga caggaatctc aagatgggct
     8041 tccaaccggt tcttttctgc cagcggtcca cgaaggctga cgtgcagctc tgtctcgccg
     8101 ccaacgtcgc ctgcctgggc gggagcgtaa agagcgagca gcggagcaaa ggcgatgcgt
     8161 ccggtatcca gatgcacgtc ggacggatac ggtgcattaa gccccacggt cccgcgccct
     8221 ttcacatatg tttgcgccac tgcggaatcg agcgcgaagt tcgccacatg gttctgaaca
     8281 gtcgtctgga acttaattct ctgaattgtc tgcttctgca cctgaagctg cggaatgtcg
     8341 atggatgcac tgagctgcgg gttcttgagc gtgcctttgc cttgcgcgtt gatgtctatt
     8401 gctccggcga tctggaggtt cttcgccgcc accgcctgca gtttttcaag gcggatgttg
     8461 ttgccggtca ccttcagttc ataagcctga gttcggggat agataacccc ggtggcctcc
     8521 gtggtccctg ccggcatctt gatctggagt ttggtgttca cggcatttcc gtcgcccttg
     8581 aagttcaggt tcagggactg cacagtttcg ttggacactt tggcgtttgt caccgtcagc
     8641 gtgccgtttc caaccgggtt ctgctgcgat ccgtgcagag agacgttcat cgccagcgta
     8701 ccgctcaccg gatatgtttt gttggcgagc cgctccagat cagcaatgga aacctgcgat
     8761 gcattgagtt ggaccgtgat tggactgttc ggagtgtagg cccactctct gagcccggta
     8821 tgaacggtga aggtaaatcg gccctgcgtg gccgaaagca gctcgccgtt gctcaacgtc
     8881 gcctgcgatg ggcttgcgtt gatgttggtc cgcaccagcc gccacgagct ccccttcacc
     8941 cgcagattgt tggcgctgaa ctgtccctga attgaaggat tttttgtgga cccactcacc
     9001 gagccaacaa aatctgcagt accgaacaaa tcaagccgct gcggagttcc ggaagccgac
     9061 gccgtcttga agttcgccgc cacggtttca atctcatgca gatcgtcact gtgcatacgg
     9121 atctgcagtt gcgagagctc gcttacctta ccatcgaggt tgatggaggt cttcggcgtc
     9181 tttatgtagc tctggtgcaa agccacttct tgccgggcag ccgaataatc ggcatggatc
     9241 acaccgtcaa tgggcgtgga gggattttgg ccaattgccg cctgcaatgt tgcattagcg
     9301 cttgcggtga ggttactgat gctctttatc catgaaacct gggcgtcggc attcaggttg
     9361 ccgaccagat gcgcctcgcg gagcgaattg gcctgcgcga ttttttgcag cacatccagc
     9421 gacacatctt tcagcgacgc ctgcagccgg ccctggccgt ttcccgccac gtccaacagc
     9481 gccagcttgc cctggaagcg tccgcccagc agttcagcgc gcatgttctc aacggtggcg
     9541 tttccgtgtt caagctcgta tttcgcgctc aggttgcgga tggcggtgtg cacgctggag
     9601 gtcttcacgt acagctccgg actgctcacc attccacgga ccactgcgct gttcaacgct
     9661 ggctcgccgg gtttgccctg atactgcgcc gttccggtca atcgaacggt gccttccggc
     9721 acagacgggt tcttcaggac cgcagcaagc tctcccgtga ccagcgatgc ctgataattc
     9781 gcctgcacat tcggattgtt gctgtaatcg tcgactgtgg cgttcaagac gacctgcgac
     9841 tgcccgagcc caagcaccat gcggtccagc acaaaccgtt gcggcgttaa ggcgaaccct
     9901 gcatccatat tgtgcggcaa cggagcgtaa tgtccgtact gaatgtgtcc atcttcatat
     9961 tgcaggtgtc cctgatagcg ctttggtccg ggatcataac ctgccgtgag ttccaggttg
    10021 cgcagattgg ccgagagcgg cgtcttctgg tcgttgtagt aaatttcacc gtgatccagc
    10081 agaagctggc gaatcccaag atcaaacaca ttcgtgttgc tgctgctggt ggatttcttt
    10141 tcaggcttcg gtagattgtt ctcgcctgcc gtgttcacgc gaactgaaac cacaggatga
    10201 ttgacttcga tggcgcgaaa gtgaaacttc cgttgcagaa cggaatcaat cgtcacgccg
    10261 acgccaagat ggtcggcctg aagcagaggt ggcgcgctcg ccggctcagt tccatgcacc
    10321 acgatcccgt acatatccag cgtaagcgtg gaaagccgca gcccgaagtc gcgcacctgg
    10381 agcgtggctc ccgttgactc ctttactgaa ctctcaacct tcgccagcag gtatccgcgg
    10441 aagccggagt tgtgctgcac cagcagcacc gccgtcaaac cgatgccgat cacaagaacg
    10501 aaaactgcta tcactgccca gagaatgatt tttttccagt tccaattcac gagtgcacca
    10561 tcaaaatgct tgtcccaaag tgatgaagta ttgccacgca ctgactccgg taaccgggtt
    10621 caggttcctt ccgatgtcaa agcgcacagg ccccaccggc gttgcgtagc gagcgccaat
    10681 gccgattgtg ttcgagtaac cgtcccacgg cttgccaaga tggctataca cgttgccgcc
    10741 atcgtaaaaa acaactccac ctaacttgtt cagcagcgaa gatggaaacc gcagctccga
    10801 attcaggatc aacaactgcg gcccgcccac cggaaccgt
//
LOCUS       DASQYP010000048         6918 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_86274, whole genome shotgun sequence.
ACCESSION   DASQYP010000048 DASQYP010000000
VERSION     DASQYP010000048.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 6918)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6918)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6918
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_86274"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            61..771
                     /locus_tag="VE783_01270"
     CDS             61..771
                     /locus_tag="VE783_01270"
                     /EC_number="1.1.1.47"
                     /inference="COORDINATES: protein motif:HMM:NF005559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucose 1-dehydrogenase"
                     /protein_id="HYX52050.1"
                     /translation="MRGIGAAIAEKLGREGANVVVNYASDKAGAQRVVTTIISLGGKA
                     VAVQADVSKTADIDKLFAETIRSFGKVDILVNNAGVYEFRPLEAVDVEHFRKQYDLNV
                     LGLLLTTREAVKHMNGDGGSVINISSVVAKTPPPAASVYAGTKAAVDAISRTLAQELA
                     PRHIRVNSLSPGFTETEGLKASVGEDQTFRNYAVSRTPLGRAGTGADIADAALFLASE
                     DSRWITGEELLVGGGIRL"
     gene            complement(850..1941)
                     /locus_tag="VE783_01275"
     CDS             complement(850..1941)
                     /locus_tag="VE783_01275"
                     /EC_number="1.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012335.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent alcohol dehydrogenase"
                     /protein_id="HYX52051.1"
                     /translation="MSTTIQPHSTSSAQTTKAFGYAAQSATSPLAPFSFARREPGPQD
                     VAIDILYCGVCHSDLHTVRNEWQNTIFPVVPGHEIVGRVTAVGNKVSRLKPGDLAAVG
                     CMVDSCRTCPSCRDGLEQYCDPGFTGTYNSEDKVLGGMTYGGYSDHIVVNEYFVLNLP
                     AQKDLSGVAPLLCAGITTYSPLRHWNVGRGQKVGIVGLGGLGHMGVKIAHALGANVTL
                     FTTSPGKQEDARRLGADEVVISRDANQMQKQAGSFDFILDTVSAQHDINAYLELLRRD
                     GTLVQVGAPEQPLPVAVFSLIFKRRNFAGSLIGGIPETQEMLDFCARHNLTADVEVIP
                     IQKINEAYERLLRSDVKYRFVIDMASLKG"
     gene            2154..2789
                     /locus_tag="VE783_01280"
     CDS             2154..2789
                     /locus_tag="VE783_01280"
                     /inference="COORDINATES: protein motif:HMM:NF013695.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008324 - monoatomic cation transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006812 - monoatomic cation transport
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation transporter"
                     /protein_id="HYX52052.1"
                     /translation="MATQVITREALARRGRRLEYFTIGWNTLEGLVAIVSGAAAGSVA
                     LVGFGIDSFIEVLSGSALLWRMSVDSDEERREQNERRALRIVGLCFVALAIYVGYEAV
                     HNLVTRDAARPSVPGIVLALAALIAMPLLSRAKRKIGDGMESAAMHADARQTDFCAYL
                     SGILIVGLLLNRLFGLWWADPLAGLVMVPIIAKEGYDGLRARACHSCQCGH"
     gene            complement(2799..4091)
                     /locus_tag="VE783_01285"
     CDS             complement(2799..4091)
                     /locus_tag="VE783_01285"
                     /inference="COORDINATES: protein motif:HMM:NF013594.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M48 family metallopeptidase"
                     /protein_id="HYX52053.1"
                     /translation="MSTLAMAQSAPPASSGVFMPSVVTVPADAQARPGFNADRATEAY
                     LAEIPPQAKARSDSYFEGGYWLILWDFLYAVAVTLLLLYLRWSAGFRNIAERITRFKP
                     LQTFLYWGQYSVVGFVLSLPIAIYEGYFREHKYGLATQTFGPWMGDQLKELLLSLVLG
                     GLVVTTLFGIVRRLRNTWWIWGAVVTFIFVTIGILISPVFIAPMFNTYKRLDDPKVTA
                     PILSMARANGIPARDVFKVDASRQSSRMSANVSGVGSTMRITLNDNLLMRASPEEVQA
                     VMGHEMGHYVLNHIYKLLLFFGVIIFVFFALLRWGLDWSLARWGQRWQIRDIGDPAVV
                     PLVVLIASIFFFVLTPLDNTFIRTQEHEADMFGINASRQPDGFAQAAIHLGEYRKMSP
                     GVWEERLFFDHPSGRNRIHDAMQWKQENLSLMEGNQKK"
     gene            4301..5767
                     /locus_tag="VE783_01290"
     CDS             4301..5767
                     /locus_tag="VE783_01290"
                     /inference="COORDINATES: protein motif:HMM:NF013775.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNase adapter RapZ"
                     /protein_id="HYX52054.1"
                     /translation="MDVLRDLFEKHFQLPAEQVKPLQGQLGGSGRNIFRISGGGRSAI
                     GVQYEVREENVAFLEFSRHFRRHGLPVPEIYAEDLKQNAYLEEDLGNTTLFEFLARNR
                     SGEKIAPAVAEAYQKVVDWLPRFQIEAGKDLNYKVCYPRASFDRQSIAWDLNYFKYYF
                     LKLAGISFNEQALEQDFGRLTRFLLTAPRDYFLYRDFQSRNVMLLEGEPYFLDYQGGR
                     KGALQYDIASLLFDAKADLPPYLRQQLLERYMERLKSFVEIDRETFLHHYYAFVYVRV
                     MQAMGAYGFRGFYERKPTFLQSVPYALKNVRWLLENVELPIQTPALLAAFRGMLESEK
                     LLSLAPSSESENVSGAEVRSDKLTVRVFSFSFHRGAPPRDDAGHGGGFVFDTRSIPNP
                     GREERFKQLTGKDRPVMEYLEQQPSAHEFLGHAASLVDASVGDYQRRGFKNLMVSFGC
                     TGGQHRSVYLAEQLARHLRERNSVNVELRHLELEKMGR"
     gene            5764..6498
                     /locus_tag="VE783_01295"
     CDS             5764..6498
                     /locus_tag="VE783_01295"
                     /inference="COORDINATES: protein motif:HMM:NF012695.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyltransferase family protein"
                     /protein_id="HYX52055.1"
                     /translation="MKAMVLAAGLGTRLRPLTNDRPKALVEIHGHTLLEMTLMRLREF
                     GIKEAIVNAHHFADRMIQYLREHGNFGMKIEVSREDMLLDTGGGLKRAGWFFQDSPEP
                     FLLHNVDVLSNIDLAALVDSHHVSGALATLAVQARQTSRYLLFDNRMFLCGRRKGEAG
                     KPEMARPSKALHAFAFSGIHVISPRLLTQISEQGVFSIIDVYLRLAAAGEKITGFRAD
                     QYYWRDLGTPQSLEQAAQDMERKLVS"
     gene            6690..6857
                     /locus_tag="VE783_01300"
     CDS             6690..6857
                     /locus_tag="VE783_01300"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52056.1"
                     /translation="MQDTQAIMRFTFRAAASANEQPEQINTVVDFIDRFTARIMTKLQ
                     NLEAEGHGAST"
BASE COUNT         1511 a         1865 c         2097 g         1445 t
ORIGIN      
        1 atctgctggc aatagcactc ggtgagtcgc ttattgtggc gcccggaagc acagcggtcc
       61 ttgcgcggaa tcggcgcagc tattgcggag aaactcggac gcgaaggcgc gaatgtggta
      121 gtgaactacg cgtcagataa ggctggagca cagcgggtgg tcacaaccat aatatccctg
      181 ggcggcaagg ctgtggccgt gcaggcggat gtttccaaaa ctgccgacat cgacaagctg
      241 tttgccgaaa cgataaggtc ttttggcaaa gtggacatcc tggtgaacaa tgccggcgtt
      301 tatgaattcc ggccgttgga agccgtggac gtggagcatt tccggaaaca gtatgacctc
      361 aatgtcctgg gactgctgct gaccacccgg gaggcggtga agcatatgaa cggggatggt
      421 ggatccgtga tcaacatcag ttcggttgtc gcaaagaccc cgccgccggc agcttcagtt
      481 tacgcgggta ccaaggccgc ggtggacgcg atcagccgca cgcttgcaca agaactggcc
      541 ccgcgacata tccgagtgaa ttcactttcc ccgggattca ccgagactga gggattgaaa
      601 gcctcagtgg gcgaagacca gaccttccgc aattatgcgg tttcgcgaac accgctcggt
      661 cgtgcgggaa ctggcgctga catagccgat gccgcgctct tcctggcctc agaggattcg
      721 cgctggatca ccggcgaaga gctgctggta ggtggtggaa ttaggctgta agtgccgctt
      781 cagattaaga aagggacagg ccgctcgaaa ttgatcggcc tgttctttct tatgtgcgca
      841 caaatgcgct cagcccttca gtgaagccat atcgatcaca aagcggtatt tcacgtcgct
      901 cctgaggagc cgttcgtagg cttcattgat cttctgaatc gggatcactt ccacgtcagc
      961 cgtgaggttg tgtcgagcgc agaaatcgag catctcctgc gtttctggaa tgcccccgat
     1021 caacgatccg gcaaaattcc ggcgcttgaa aataaggctg aagacagcga cgggcagcgg
     1081 ctgctccggc gcgcctacct gaaccaacgt tccatcgcgc ctgagcaact cgaggtacgc
     1141 gttgatgtcg tgctgggcgg agactgtgtc gaggatgaaa tcgaagctgc cggcttgctt
     1201 ctgcatctga ttggcgtcgc gtgagattac aacttcatct gcacccaacc ggcgtgcgtc
     1261 ttcctgtttg cccggcgagg tggtgaagag cgttacgttg gcgccgagcg catgcgcgat
     1321 tttgactccc atatggccga gtccgccgag gcccacgatt cctaccttct ggcccctgcc
     1381 cacattccag tggcgcagcg gcgagtaggt ggttattccg gcgcagagca gaggcgcgac
     1441 tcctgagagg tccttctgtg ccggaaggtt cagaacgaaa tactcattca cgacaatgtg
     1501 gtcggaatag ccgccgtagg tcatgccgcc caggacttta tcttcgctgt tgtatgtgcc
     1561 ggtaaatccc ggatcgcagt attgttccag gccatctctg caactgggac aggtgcggca
     1621 cgaatcaacc atgcagccga cggcggcgag atcgcccggt ttgaggcggc tgactttgtt
     1681 tcctactgcg gtgacgcggc cgacaatctc atggccggga acaacgggga agatggtgtt
     1741 ctgccattcg ttgcgcacgg tgtgcagatc agagtggcag actccgcaat aaagaatgtc
     1801 aatggccaca tcctgagggc cgggctcgcg gcgagcgaaa gagaaaggag ccagcggaga
     1861 agtggcggat tgagcagcgt atccgaatgc tttggtggtc tgcgctgagg aagttgaatg
     1921 cggctggatg gtggtgctca ttgctctcct tggaatgaaa aagttggtta tgaaaagttg
     1981 ggccgatcag caggcaacgt gagtggcggt tgaaagagac ccgaacatag ttggatgatc
     2041 aatcaggaga taacgtgagt aacggccgag tgaaaccaga atagtagctg ggcggcgcgc
     2101 attgcgacgc cccagcggac agagactcag gaagggatta agatgttgtt cagatggcca
     2161 cgcaggtgat cacgcgcgaa gctctggccc gtcggggcag gcggcttgag tacttcacca
     2221 tcggctggaa cacgcttgag gggctggtag caattgtgag cggcgctgcc gctgggagcg
     2281 ttgcgctggt cgggttcggg atcgacagct ttattgaagt gctttccggt tcggcgctgc
     2341 tctggcgcat gtctgtggac agtgacgaag agagacgtga gcagaacgag cgacgagcgt
     2401 tgaggatcgt gggattatgc tttgtagcgc tggcgatcta tgtgggctac gaagcggtgc
     2461 acaatctggt gacgcgagat gctgcgcgac ccagtgtgcc tggaattgtg cttgcccttg
     2521 ctgcgctcat cgcgatgccg ctgctctcgc gcgccaagcg caagatcgga gatgggatgg
     2581 aaagcgcggc catgcacgct gacgcgcgcc agacagattt ttgcgcttat ctctcgggca
     2641 ttctgattgt ggggctgctg ctcaaccggc ttttcggact ctggtgggct gacccgctgg
     2701 ccgggctggt gatggtgccg atcatcgcta aagagggata cgatgggttg cgtgcccgcg
     2761 cctgccattc atgccagtgc gggcactgaa agtgcaatct acttcttctg gttgccctcc
     2821 atcaggctga gattctcctg tttccactgc atggcatcgt ggatgcgatt gcgtccgctg
     2881 ggatgatcga agaagagccg ctcttcccac actcccggac tcatcttgcg gtactcgccg
     2941 aggtgaatgg cggcctgggc gaagccgtca ggctgacggc tggcattgat gccgaacatg
     3001 tctgcttcat gttcctgcgt gcggatgaag gtattgtcta gaggcgtgag cacgaaaaag
     3061 aagatggatg cgatgagcac aacaagagga actacggcgg gatcgccgat gtctcggatc
     3121 tgccagcgct gaccccagcg cgcgagtgac cagtccagtc cccagcggag cagcgcgaag
     3181 aatacaaaaa tgattacgcc aaaaaacagc agcagtttgt aaatgtggtt cagcacgtag
     3241 tgccccatct catgtcccat taccgcttgc acttcctcag gagaagcacg catgagcaga
     3301 ttgtcgttga gcgtgatgcg catggtgcta cccaccccgc tcacgtttgc gctcatgcgc
     3361 gatgactggc gtgaggcgtc taccttgaaa acgtccctgg ctggaatgcc attcgcgcgc
     3421 gccatactaa ggatgggcgc cgtgactttg ggatcatcga gccgcttgta ggtgttgaac
     3481 attggcgcga tgaagacagg cgagatcaga atcccgatgg taacaaagat aaacgtcacc
     3541 actgcgcccc atatccacca tgtgttgcgc agccggcgaa caattccaaa gagagtagtg
     3601 accaccaatc ctcccagcac aaggctgagg agcagttcct tgagttgatc gcccatccat
     3661 gggccgaacg tctgcgtggc gaggccgtat ttgtgctcgc ggaagtagcc ttcgtagatg
     3721 gcgatgggca atgacagcac gaagccaaca acggagtact ggccccagta gagaaaggtt
     3781 tggagcggtt tgaatctcgt gattcgttcg gcgatgttgc ggaaaccagc cgaccagcgc
     3841 aggtacagga gcagcagagt caccgcgacg gcgtaaagga aatcccacag aatgagccag
     3901 tagccgcctt caaaatagga gtctgagcga gctttggcct ggggtgggat ttcagcgagg
     3961 tacgcttcgg tggcgcggtc agcattgaat ccgggacggg cctgcgcatc ggcgggaaca
     4021 gtcaccacgg aaggcatgaa gacgccagac gaagcaggcg gagcggactg cgccatcgcc
     4081 agggttgaca cggaaccaga taatgctagc aacaggacgc aaagggacca cgggcgctga
     4141 ttcatcaaga ttgtgccttc cagatctgga ttggttgttg ggtattgtac gcgcaaggcc
     4201 ccgggaaggt tcctggatga gttttcatcg ggttgcggat gagcgggcgt tgcaagccgc
     4261 gagcccttcg atgttatctt gttggttacg gcgctaactc atggacgttc tccgggacct
     4321 tttcgaaaag cattttcaac ttccggccga gcaggtgaag cctctacagg ggcagcttgg
     4381 cggctcggga cgcaacatct tccgcatttc aggcggtggt cgcagcgcca tcggcgtgca
     4441 atatgaagtg cgcgaagaaa acgttgcctt cctcgagttc tcgcgccatt tccgtcgcca
     4501 cgggctgccg gtaccggaga tctatgccga agacctaaag cagaacgcct atctggaaga
     4561 agaccttggc aacacaactc tgtttgagtt tctggcccgc aatcgaagcg gcgagaaaat
     4621 cgctccggcg gtggcggagg cctaccagaa agtggtggac tggctgccac gcttccagat
     4681 cgaggctgga aaggacctga actacaaggt ctgttatccg cgggcgagct ttgatcgcca
     4741 gtcgattgcc tgggacctca actatttcaa gtattacttc ctcaagctgg ccggcatcag
     4801 cttcaatgag caggcactgg aacaggactt tggccgactg acccggtttc tgctcacagc
     4861 accgagagat tactttcttt atcgcgattt ccaatcccgc aacgtgatgc tgctggaagg
     4921 agaaccatat tttctcgact atcagggagg gcgcaaaggc gcgctgcagt atgacattgc
     4981 atcgctgctg tttgatgcca aggccgatct gccgccatat ttaaggcaac aactcctcga
     5041 gcgatacatg gagcgactga agagctttgt ggaaatcgac cgcgagacct tcctccacca
     5101 ttactatgca ttcgtttatg tccgcgtgat gcaggcgatg ggagcctacg gttttcgcgg
     5161 cttttacgag cgtaaaccta cctttctgca gtctgtgcca tacgcgctca agaatgtgcg
     5221 ctggctgctg gagaatgtcg aacttcccat ccagacgccg gcacttctcg ctgctttccg
     5281 cgggatgttg gaatcggaaa agctgttatc gcttgcgccg agctctgaat cagaaaacgt
     5341 cagcggcgcc gaagttcgat ccgacaagct gacggtccgc gtttttagct tctccttcca
     5401 tcgcggcgcg cctccgcgcg acgacgccgg ccacggcggc ggatttgttt ttgacacgcg
     5461 gagcattccc aatccgggca gggaagaacg gttcaaacag ctcaccggca aagaccggcc
     5521 ggtgatggaa tacctggaac agcagccgag cgcgcatgaa ttcctgggcc acgcggcctc
     5581 acttgtggat gcaagcgtag gcgattatca gaggcgcggc ttcaaaaatc tgatggtttc
     5641 atttggttgt accggcggac aacatcgttc ggtgtatctt gcggagcaac tggcacggca
     5701 tctgcgcgaa cgcaacagcg tgaacgtgga actgcggcat ttggaactgg agaagatggg
     5761 ccgatgaagg ccatggtgct ggcggcggga ctcggaacac ggctgcgtcc gttgaccaac
     5821 gatcggccga aagccctggt tgagatccat ggccacacgc ttctcgaaat gaccctgatg
     5881 cgtctccggg agttcggcat caaggaagcc attgttaacg cgcaccactt tgctgatcgc
     5941 atgattcagt acctgcgtga gcacggcaat tttgggatga agatcgaagt ctcgcgcgaa
     6001 gatatgctgc tggataccgg cggcggcctg aaaagggccg gctggttctt ccaggattcg
     6061 cccgagccct ttctgctgca caacgtggac gtgctcagca acatcgatct ggcggccttg
     6121 gttgattcgc accatgtttc cggagcgctg gcgaccctgg ccgtgcaggc ccggcagact
     6181 tcgcgatacc tgcttttcga taaccgcatg ttcctgtgcg gacggcgcaa aggcgaagcc
     6241 ggtaagccgg agatggcgcg accgtccaag gccctgcacg cattcgcgtt ttccgggatt
     6301 catgtaattt ctccgcgact tctgacccaa atcagcgaac agggcgtctt ctccatcatc
     6361 gacgtttatc tgcggctggc agctgccgga gaaaagatca ccggcttccg cgccgaccaa
     6421 tactactggc gcgatctagg cacgccgcag agcctggagc aggcggcaca ggatatggaa
     6481 cgaaagctgg tttcctagtc cctgctcaag atttgccaac actcctcagc aaagcttgaa
     6541 tctgcacgac gacaccacgc tcgcggacat gaccttccgg gacagcgaaa tgtgacattt
     6601 gtcacccaaa gcggccaaat tgtccgtcta tactccaagc aactttgaaa ctaaacgatt
     6661 gactgacccc gagaaatgga gcacccccga tgcaagatac tcaggcaatc atgcgattca
     6721 ccttccgagc agcggccagc gcgaacgaac agccggagca gatcaatacg gtggtggatt
     6781 ttattgaccg ctttaccgcc cgcatcatga caaaactcca gaacctggaa gccgaagggc
     6841 acggcgcttc aacatagaag ccaagcgccg gttgcacctg cgccacctca gaccagcgtg
     6901 acgtcaggcg tattcctt
//
LOCUS       DASQYP010000049         2664 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_22769, whole genome shotgun sequence.
ACCESSION   DASQYP010000049 DASQYP010000000
VERSION     DASQYP010000049.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 2664)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2664)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2664
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_22769"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            480..1397
                     /gene="xerD"
                     /locus_tag="VE783_01305"
                     /pseudo
     CDS             480..1397
                     /gene="xerD"
                     /locus_tag="VE783_01305"
                     /inference="COORDINATES: protein motif:HMM:NF001399.0"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0009009 - site-specific recombinase
                     activity [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific tyrosine recombinase XerD"
     gene            1394..2314
                     /locus_tag="VE783_01310"
     CDS             1394..2314
                     /locus_tag="VE783_01310"
                     /inference="COORDINATES: protein motif:HMM:NF001399.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0009037 - tyrosine-based site-specific
                     recombinase activity [Evidence IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA];
                     GO_process: GO:0007049 - cell cycle [Evidence IEA];
                     GO_process: GO:0007059 - chromosome segregation [Evidence
                     IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine recombinase XerC"
                     /protein_id="HYX52057.1"
                     /translation="MSAELKGSPEVRKGIVRFLEYLRSERHASPHTLRAYSNELQRFA
                     EYAGPEIRWKDIDHVFVRGFLSSLHEAGLSKVSIARALAAVRSMYKWLAREGIVKQNP
                     AKLVATPKLPKKLPRVPTMEEMNGLLNAELPEHAAFPERDKAIFELLYGCGLRNSELV
                     GIELNDLQEANGVILVRGKGKKQRYVPLEGAAEESLRTYRTERQKLLNAAGKSTRRLF
                     INRRGGPLTTRSVGRIVKQIAIARGLPPDIHPHTLRHAFGTHMLAEGADLRAIQELLG
                     HERLSTTQKYTQLSMTQVMEVYDKTHPRAK"
     gene            2436..>2664
                     /locus_tag="VE783_01315"
     CDS             2436..>2664
                     /locus_tag="VE783_01315"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52058.1"
                     /translation="MKRIASLLLLAALATTLLAQKPAAPAQKAPEKQPVTGAPTEQEV
                     LKLLDLLQVEDGVKATIETMKDQLKAGAEQNF"
BASE COUNT          623 a          709 c          797 g          535 t
ORIGIN      
        1 gaaacctttt gtgttgccgg aaaagaaacg tgcagttaag aagagttcgg cagaacacct
       61 ttgagacgta ggaacagagg gcaggaattg ccaggatcgc cgagattgcc aggattgatg
      121 atttggaatc gacgatgcag gcggttgagc acaccttgga aacaaagagg aacagagggt
      181 aggaatttgc caggattcgc gaaaacaaag gctcaacctg tctcttttca ccacctctga
      241 cgctttatcc cagccaaact gcaatgcgct tgaatttctt cttaatccct ctgcgtcctc
      301 tgttcctccg tgtttcaaag gtgtacttag aaaatcgcgt cgtcaatccg aaatcatcac
      361 tcctggcaac ctcggcgatt tgcaggtatc aattttgcta gaccgagaac cttgccggtt
      421 atttgccgag cggctgccgt gcagccatac tgatgtacat gaagctggcc gaccagagag
      481 tgctccgggg gtttctcgac tatctcaaag tcgagaaggg gctggcggcg cttaccatca
      541 gcggatacgg ctctgacctg gagcaatttg ccagttttct ggagcagaaa cgccgcgagc
      601 tgctgcaggc gcgcaaggaa gacattcgcg gattcctgaa ccagcttttt gcgaatggag
      661 tgggcgaccg gtcagtggcg cgaaagcttt ccgccctaag gcacttttac aagtatcttt
      721 tgttggaccg catgattcag cacgatccca ctctggatat cgactcgccc aaacagtgga
      781 aggtactgcc caaggcgctg gcgtcaactg agattcatgc catgctgagt tctagaagag
      841 caactgaagc cgccggcgat ccaaagcttg cagcggccct ttcccgacgg gacttggcga
      901 tgctggaagt gctttatgca gcggggctgc gcgtttccga aatcgtggga atcaaactgg
      961 aggacctgaa gctggagttc gggcacgtgc tggtgcgcgg caagggcgac aaggagcggc
     1021 tggtgccgct gggacgcgcc gcgcaggagg cgcttcaggg ttatctttgc gatggccgcg
     1081 gtgttttgct gggtcagaga gtctcgccga tgttgtttgt gcgccgcggc ggagccaagt
     1141 tgacgaggca gcgcgtctgg cagatggtga agacggcttc ctcacagggg aggcatgcga
     1201 gcccacatat gctgcggcac agctgtgcta cgcacatggt ggaaaacggt gccgatctgc
     1261 gtacggtgca gacaatcctg ggccatgcag atgtctcaac cacgcaggtg tacacgcacg
     1321 tagctctgga tcggttgaaa aatgtgtacc gccgctatca tcccaggatg aagaacaaag
     1381 gtgagaaccg agcgtgagcg ctgaactcaa ggggagcccg gaagtccgaa agggtatcgt
     1441 gcgctttctg gaatacctgc gctcggaacg gcatgcatca ccgcacacgc ttcgcgccta
     1501 ctcgaatgag ttgcagcgct tcgctgagta cgcgggcccg gagatccgct ggaaagatat
     1561 tgatcatgtt ttcgtgcgtg gattcctgtc gtcgctgcat gaggcaggct tgagcaaggt
     1621 ttccattgca agggcactgg ctgcggtgcg ctcaatgtac aagtggctgg cgcgagaagg
     1681 catcgtaaag cagaacccgg caaagctggt tgccactccc aagttgccga agaagctgcc
     1741 acgcgtgccg accatggaag agatgaacgg tctgctcaac gccgagcttc cggaacacgc
     1801 agcatttcct gagcgcgaca aagccatctt cgaactgctt tatggctgtg gactgcgcaa
     1861 ctcagagctg gtgggaatag agctgaacga ccttcaggag gcaaacggcg tgatcctggt
     1921 tcgcggaaaa gggaagaagc agcgctacgt tccgctggaa ggcgctgcgg aagaatcact
     1981 acgcacctat cgaaccgaac gccagaaact gctcaatgct gccggaaaga gcacaagaag
     2041 gctgttcatc aatcgccgag gcgggcctct taccacgcgc agtgtgggac gaatcgtaaa
     2101 gcagattgcc attgcccggg gactgccgcc agacatccat ccccacacac tgcgacatgc
     2161 ttttggcacg cacatgctgg ccgagggcgc cgacttgcgg gcgatccagg agttgctggg
     2221 gcatgagcgc ctatctacta cccagaagta tacccagctt tccatgacgc aggtgatgga
     2281 ggtgtacgac aagactcatc ctcgggccaa gtagtatcgg accgaggggg catgattccg
     2341 tctcgcttac ataatgagca aggcggcttc ccgcctgatc acgctacctc gccgaatcgg
     2401 ctgctgtatg atgctgatgc aggcaggttc cccacatgaa aagaattgcg tcacttctcc
     2461 ttttggcagc tcttgccaca acactccttg cccaaaagcc ggccgctcca gctcagaaag
     2521 cgccagaaaa acagccggtg accggcgcgc ctacggaaca ggaggtgctg aagctcctgg
     2581 atctgctgca ggtggaagac ggagtaaagg cgacgattga aaccatgaag gaccagctta
     2641 aggcgggcgc agagcaaaac ttcc
//
LOCUS       DASQYP010000050         8375 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_66353, whole genome shotgun sequence.
ACCESSION   DASQYP010000050 DASQYP010000000
VERSION     DASQYP010000050.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 8375)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8375)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8375
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_66353"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            169..786
                     /locus_tag="VE783_01320"
     CDS             169..786
                     /locus_tag="VE783_01320"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52059.1"
                     /translation="MARESLGEARRQTMGCGMGCLGSIIGTIIAGVIIIVLFAPWAFY
                     IGGRPTPMTTWEGYGKLHSSTGADYGLYLKLSYYHVKRSRQNLSGGAVLCTPNGKTLQ
                     YGIDGRIDNVWLYTEGKQTKLSLEKSKTDTLNATFDLYGEWQNGRLILGDRGSMGKPF
                     HADGSLDAKGRYNPRPNKNEQANVTVSYGTKFDFYEFCSNEITRR"
     gene            complement(787..1482)
                     /locus_tag="VE783_01325"
     CDS             complement(787..1482)
                     /locus_tag="VE783_01325"
                     /inference="COORDINATES: protein motif:HMM:NF024811.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD hydrolase-like protein"
                     /protein_id="HYX52060.1"
                     /translation="MISQTLLIDADDTLWENNVYFEQAIAGFIERLNHQHMSPKEVRL
                     FLNEVERETILERGYGSHSFAHSLVKCFERLAEQPVTPELHDFIWGFAHKVSNYPIEL
                     ISGVPETLNYLDERQHHLILMTKGDLTEQAGKVERSGIKNYFAAVEIVAEKTTTAYKG
                     IVEKYQLEVATTWMIGNSPRSDINPALAAGINAVFVPHDMTWILERETIDSPPDGVRL
                     LQVERFTDLQQHF"
     gene            1623..3368
                     /locus_tag="VE783_01330"
     CDS             1623..3368
                     /locus_tag="VE783_01330"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52061.1"
                     /translation="MHQTAKIFIAMKSFRFAVRFLIIAAMCSTALAQAGRRAGAAPKK
                     ADQCTINEPIHEDLAAQVAKFKMVSMPFSVVGLSEQEQQMVYKLVEAAQKLDLIYWQQ
                     SDPKGLALLKKISGCNQVQNQKLRRLLIINGSRYDLLEDNKPFVGNDPYPPGRNLYPA
                     GLTRQEIEAYVAKHPEQKERIYSPFTVIKKQGTQLITVPYHVEYKALLTEAATALREA
                     AGMSPDKAFAGFLRLRADALLTDNYYPSDLAWLDLENPKFDIIFAPYETYLDGVLGVK
                     TSYGAAVMIRNEQESVKLAVFKKYVPEIQAALPLAPEDKPSLEGKSSPMEVMDTPYRG
                     GDLRHGYQAVADNLPNDPRIHQEKGSKKIFFKNFMDARVNYVVLPLGKLLMREDQANL
                     ASMDGYLSAVLMHEICHALGPAYARTPQGQQDIRASIGPTYGGLEEAKADMVGLWALD
                     WLMEKGVLQREAAPEVYASHVAGIFRTVRFGVAEAHGRAEMMEFNYLSEQGAITHDPK
                     SGRYVIDFAKMPAAIASLAKELLEIEATGDRNRAEQWFKKYDSMPAALKSALDGIKDV
                     PVDIDPVSALEIQVQ"
     gene            3372..3728
                     /locus_tag="VE783_01335"
     CDS             3372..3728
                     /locus_tag="VE783_01335"
                     /inference="COORDINATES: protein motif:HMM:NF018894.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0035438 - cyclic-di-GMP binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PilZ domain-containing protein"
                     /protein_id="HYX52062.1"
                     /translation="MIKEMPEPKMIEKRRFERIDLKKPAQVLVLDNKGRRVGTLRQLA
                     RGGFAMEPERAYEKDGKVHHFTIHELAEDIRADVSARVRFADNQLAGFEFVDLTPAAA
                     VEIGIIIGKYYETAKE"
     gene            4377..4919
                     /locus_tag="VE783_01340"
     CDS             4377..4919
                     /locus_tag="VE783_01340"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52063.1"
                     /translation="MMKRLLEALASGEDIGQYGRLVFAMVARHFISREELVEQLCKCP
                     AFSQEQALSLVDQVSQRDYNPPRREKILAWQQEQDYQICPVPGDPDACNLYKNLKFPG
                     WRLRQDRGLPPGAGKLRRAGGRRAKKFIKSCSPGSGRVSYQSGCKDGSKEFQKLIGCG
                     RQGGNPRRPFFCRKKARPLF"
     gene            complement(4944..6254)
                     /locus_tag="VE783_01345"
     CDS             complement(4944..6254)
                     /locus_tag="VE783_01345"
                     /inference="COORDINATES: protein motif:HMM:NF014081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HYX52064.1"
                     /translation="MNRTYYLLVLLAAFLCFNCVPASALQAKEDGDGIIVLHAGHMLD
                     VKTGQLLNNPTLVIEGGKITKVGAPTWGNRPAHVTEINLPNATLLPGLIDVHTHITYD
                     PQFGYQQLGISIPKEALIGAKNARVTLEAGFTTVRNVGASGYTDVALRDAINEGMVPG
                     PRMIVSGPALSITGGHCDDNLLPFEYHHAAEGVADGVEAVQHKVRETIKYGADVIKVC
                     ATGGVLSKGDDPRASQFTLEEMKAIVADAHRLGRRVAAHAHGAQGIAWASEAGVDSIE
                     HGSYIDDNGIKVMKEHGTYLVPTQYLMDWMRENATRIGLPAMFAGKMKEVTAASRENV
                     KQAMQAGVKIAFGTDAAVYPHGLNAHEFAVYVQMGLTPIQAIQTATVNAADLLGWSDR
                     IGVLEAGKFADIIAVNGDPIKDVTLLQSPVFVMKNGTVYKKTAQ"
     gene            complement(6324..6860)
                     /locus_tag="VE783_01350"
     CDS             complement(6324..6860)
                     /locus_tag="VE783_01350"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52065.1"
                     /translation="MKPLCVLLVLFAGTLAAQQSSDNPHFDLIKLSQGNCINQGRVQD
                     SDLKNRENIMEHVQHHGVNSVDSLGKVISNGHPLNHPILCGWHGMQVGDVALIVLLDL
                     FKDPAGRSTAHELEWDTFLERSSPALTPEQVLRSFVRTHRRSGLQEKWNYFWQEHKDQ
                     IIWDVEARCYRMQPGHPR"
     gene            complement(7063..>8375)
                     /gene="purF"
                     /locus_tag="VE783_01355"
     CDS             complement(7063..>8375)
                     /gene="purF"
                     /locus_tag="VE783_01355"
                     /EC_number="2.4.2.14"
                     /inference="COORDINATES: protein motif:HMM:TIGR01134.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004044 - amidophosphoribosyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="amidophosphoribosyltransferase"
                     /protein_id="HYX52066.1"
                     /translation="VVTSDGLTSRVHKAMGTVADIFTEEVLAKLRGTLAIGHTRYSTA
                     GDSAVLNAQPIMVDCNKGMIALAHNGNLVNAWEIRARLEAQGSIFQTTSDTEVIVHLI
                     AQSKEQTLPEAVCDALRRIEGAFSLVMMTRDRVFAVRDPRGFRPLSMGRIHNGGGSER
                     DTIVFASETCAFDLIGAVYERDVKPGEMVVVGPEGTSSRFFGAELKKSACIFEHVYFS
                     RPDSMVFGRPVQASREAMGRRLAIESGVPADVVVPVPDSGVTAALGYAAEAGIPFRFG
                     LIRNHYVGRTFIEPEQRVRDFGVKLKLNPVRSLLAGKRVVLIDDSIVRGTTSRKIVRM
                     VRDAGAKEVHMRISCPPTISPCYYGVDTPSRNQLIAANKSLEEIRDYIGADSLAYLTL
                     EGLREACAEGEKTTYCTSCYTGIYPTEFVPLEALIPASVPEKTR"
BASE COUNT         1878 a         2272 c         2496 g         1729 t
ORIGIN      
        1 ccctgtttca agcagggtgc tttttctgcg gctggtcaga gcagagctgt gtctgaactc
       61 gggatgcttg aggtctgcgc tgcgatataa tcccgcgcaa attcaacaaa aaaggtagca
      121 acgttggcac aaacaccgga tccgaagcag cttgagctgg cgagggagat ggcacgagaa
      181 agcctcggcg aggcccgccg ccagactatg ggctgcggga tgggctgcct gggatcgatt
      241 atcggaacga ttatcgccgg cgtgattatc attgtgctgt tcgcgccctg ggcgttctac
      301 attggcgggc gtcccacgcc gatgaccaca tgggaaggat acggaaagct gcattcctca
      361 accggcgccg attacggtct ttatctaaag ctctcttatt accacgtgaa gcgaagccgg
      421 cagaacctga gcggcggcgc cgtgctatgc acgccaaacg ggaaaactct gcagtatggc
      481 attgatgggc gcattgacaa tgtctggctg tataccgagg gcaagcagac aaaactttcg
      541 ctggagaagt cgaaaaccga cactctgaac gccacgtttg atctttatgg cgaatggcag
      601 aatggcaggc tcatcctcgg cgaccgcggg agcatgggca agcccttcca tgccgatgga
      661 tcactcgatg ccaaaggccg ctacaatccc aggcccaaca agaacgaaca ggccaatgtg
      721 accgtaagct acggaacaaa gttcgatttt tacgagttct gcagtaacga gatcacaagg
      781 cgctagttaa aaatgctgct ggagatcggt aaaacgctca acctggagca ggcgtacgcc
      841 gtcaggtggt gagtcgatgg tttcgcgttc gaggatccac gtcatgtcat gcggcacaaa
      901 gaccgcattg atgcctgcgg cgagcgcggg attgatgtct gaacgagggc tgttgccaat
      961 catccaggtg gtggccacct cgagctgata tttctccacg atacccttat acgcagtagt
     1021 agtcttttcc gcgacaatct ccacagctgc gaaataattc ttgatcccgg agcgctcgac
     1081 ctttcccgcc tgctcggtga ggtcgccctt agtcatcagt atgaggtgat gttggcgctc
     1141 atccagatag ttgagcgtct cggggactcc ggagatcagt tcgatggggt agttcgagac
     1201 cttatgagcg aaaccccaga tgaagtcgtg caactcaggc gtgaccggtt gttcggcaag
     1261 ccgctcaaaa cacttgacca gcgaatgcgc gaagctgtgc gagccataac ctcgttccag
     1321 gatggtttca cgctccacct cattgagaaa gagcctgacc tccttcggcg acatgtgttg
     1381 gtgattcaga cgctcaatga acccggcgat cgcctgctca aagtagacgt tgttttccca
     1441 gagcgtgtca tcggcgtcaa tgaggagcgt ctgggaaatc atgagaatta gacatgataa
     1501 atcctcagaa gccgcgggca gcagtgccgc tgatgattgc aaaagctgct ggctaacagc
     1561 tactagcttc agtcgtttgg ccttggcctt tggcccttgg atcccattgg gcaaacctgt
     1621 tcatgcacca gactgctaaa atcttcatcg cgatgaaaag ctttcgtttc gcagttcgct
     1681 tcctgataat cgcggccatg tgctcaacag cgctcgcaca agcaggccgt cgcgcagggg
     1741 cggcgccgaa aaaggccgac cagtgcacga tcaatgagcc tatccacgaa gatcttgcgg
     1801 ctcaggtggc aaagttcaaa atggtttcca tgcccttcag cgtggtggga ctgagtgagc
     1861 aggaacagca gatggtttac aagctcgtgg aggccgcgca gaagctggac ctgatctact
     1921 ggcagcagag cgatccaaaa gggctggcgc tgctcaagaa gatcagcggg tgcaatcagg
     1981 tgcagaacca gaagctgcgc cggttgctta tcatcaatgg cagccgctat gacttattgg
     2041 aagataacaa accattcgtc ggcaatgatc cttatccgcc ggggcggaat ctttatccgg
     2101 cagggttgac acggcaggag atcgaagcct acgtcgcaaa gcatcctgag cagaaggaaa
     2161 gaatctacag tcccttcacg gtgatcaaga agcagggcac gcagctgatc acggtcccat
     2221 atcacgttga atacaaggcg ttgctgaccg aggcagcgac ggcgcttcgc gaagctgccg
     2281 gcatgagccc ggacaaagcg ttcgcgggat ttcttcggct gcgggccgat gctctgctga
     2341 ctgacaatta ttatccgagc gatctcgcct ggcttgacct ggagaacccc aagttcgaca
     2401 ttatctttgc accctacgag acttaccttg atggcgtgct gggcgtgaag acctcttatg
     2461 gcgcggcggt gatgatccgc aatgaacagg agagcgtcaa gctggcggtg tttaagaagt
     2521 atgtcccgga aatccaggca gcgctgccgc tggcgccgga ggacaagccg tcgctcgaag
     2581 gcaagagttc tcccatggaa gtaatggaca ctccgtaccg cgggggagat ctgcggcatg
     2641 gatatcaggc tgtggcggac aatctgccga atgatccacg gatccatcaa gaaaagggat
     2701 caaagaagat ttttttcaag aactttatgg atgcccgcgt caactatgtg gttctgccgc
     2761 tgggcaaact gctgatgcgg gaagaccagg ccaacctcgc ctctatggat ggctatctat
     2821 cagcagtgtt gatgcacgaa atctgccacg cgctgggacc agcctatgct cgcacaccgc
     2881 agggacaaca ggacatcagg gcctccattg ggccgactta cggcggcctg gaagaagcca
     2941 aggcggacat ggtgggcttg tgggcgctgg actggctgat ggaaaaaggc gtgctgcagc
     3001 gggaagctgc gccggaggtc tacgcttcgc atgttgccgg aatcttccgg acggtgcgtt
     3061 tcggtgtggc tgaagctcac ggtcgcgcgg agatgatgga gttcaactac ctcagcgagc
     3121 aaggggcgat cacgcatgat cccaaaagcg gacggtacgt catagatttt gcgaagatgc
     3181 ccgctgcgat agcctctctg gccaaagagc tcctcgagat tgaagcaacg ggcgaccgga
     3241 accgcgctga acaatggttt aagaagtatg attccatgcc ggctgcgcta aaatcagcgc
     3301 tggatgggat caaggacgtg cccgtggaca ttgacccggt gagcgcgctg gaaatacagg
     3361 tgcaatgaac catgatcaag gaaatgccgg aacctaagat gattgagaag cgtcgctttg
     3421 agcgcattga cctgaaaaag ccggcgcagg tgctggtgct ggacaacaag ggccggcgag
     3481 tgggcacgct acgccagctg gcgcgcggcg gcttcgccat ggagccggag cgtgcctacg
     3541 agaaagacgg caaggtacac catttcacca ttcacgagct ggctgaggac atacgggcag
     3601 acgtgagcgc acgcgtgcgc ttcgcggaca accagcttgc cggctttgaa tttgtggatc
     3661 tcaccccggc ggcggccgtg gagatcggga tcatcatcgg aaagtattac gagacggcta
     3721 aagagtagcg ggcggcagcc cgggtttttc ctggccaccc ttactcctcg atcaaataga
     3781 aaacctcggt gcgtatttgg gacgaatcgg cgttccagct ttcctgccaa tggccataaa
     3841 cctcccagca aatgtttgag agccggtgtc cctgctgaag gcaccactcg cggatggcgt
     3901 catgcgcctc gccaaggcgg gggtaggggc caaaatggac ggttgtggca acgcgccctg
     3961 ccggcagctg cgagcacttg acgcgatcat ttcccgcgaa ccgctcgctt acttcggcgc
     4021 cgacctcgac tgatccgtgg ccatcaccca agtaaagagc gacatggcgc ccgggcttcg
     4081 gcaaaccggc agagcgaatg aaattccaga cctcgccgca tgctgctgga acgaaccttg
     4141 aggtgttgag gagatacccg gcttcggatc acagccttat gttggttcgc actgcctgac
     4201 tttgatctcg gaatgcatgt gtgtccttca gcaagccaga cattctagcc cgcatctgct
     4261 cgcgattcta agcacccatc gaccgcgcat ccgcgtggta ttagaaacaa aagcgaatag
     4321 ttactattat ccacggagga gatgctatgc ctgggcgaga actgactgat aatcccatga
     4381 tgaaaagatt gctggaggcc cttgcttccg gcgaagacat tggccagtac gggcggctgg
     4441 tttttgccat ggtggcgagg cacttcatat ctcgggagga gttggtggag caactctgca
     4501 agtgcccggc cttcagccag gaacaggcgc tcagtctggt ggaccaggtc agccagcgtg
     4561 actacaaccc accgcggcgg gagaagatcc tggcttggca gcaggaacag gattaccaga
     4621 tctgtccggt tccaggcgat ccggacgcgt gcaacttata caaaaatctg aagtttccgg
     4681 gatggcgtct acgacaagat cgaggattac cacctggcgc gggcaaactc aggcgagcgg
     4741 gagggcggag agcaaaaaaa ttcataaaaa gctgttcccc cggaagcggc cgcgtgtctt
     4801 accagtcagg ttgtaaagac ggttctaaag agtttcaaaa actcattggc tgcggtcgcc
     4861 agggcggcaa ccctcggcgg cccttttttt gtcgcaaaaa ggcccggccg ttattttgac
     4921 cagccttccc gttttcggcg aagttactgc gcagttttct tgtaaacggt gccgttcttc
     4981 atcacgaaaa ccgggctctg caggagcgtg acgtctttaa ttggatcgcc gttcaccgcg
     5041 atgatgtcgg caaatttgcc ggcctcaagc acgccgatgc ggtctgacca gccaagcagg
     5101 tcagcggcat tcaccgtggc agtctgaatg gcctggatcg gggtaagccc catctgcaca
     5161 tacacggcga actcatgagc attcaggccg tggggataaa ccgcagcatc cgtgccgaac
     5221 gcgatcttca caccagcttg cattgcttgc tttacgttct cgcgagaagc agcagtcact
     5281 tccttcatct ttccggcaaa catggccgga aggccgattc gagtggcatt ctcgcgcatc
     5341 cagtccataa ggtactgcgt agggacaaga taggtgccat gctctttcat caccttgatt
     5401 ccgttatcgt cgatataaga tccgtgctcg atcgaatcga cacctgcctc tgaagcccag
     5461 gcaattccct gcgcgccatg ggcgtgcgcg gctacacggc ggccgagccg gtgcgcgtcg
     5521 gccacgatgg ccttcatttc ttccagcgtg aactgtgagg cccgcgggtc atctcctttg
     5581 gagagcacgc cgccggtggc gcagactttg atcacgtcag cgccgtactt gatggtttcg
     5641 cggactttgt gctgaacggc ctcaacgcca tccgctacgc cttccgcggc gtggtgatat
     5701 tcaaacggaa gcagattgtc gtcgcagtga ccgcccgtga tggaaagcgc cgggccgctg
     5761 acgatcatgc gcggcccagg caccatgcct tcattgatgg cgtcgcgcag agcgacatct
     5821 gtatagccgc tggccccgac attacgaacg gtagtgaagc ccgcttcgag cgtgacgcgc
     5881 gcattcttgg cgccgatcag ggcttccttg gggatgctga tgccgagctg ctgataacca
     5941 aactgcggat cataggtgat gtgggtatgg acatcgatga gcccgggcag cagggtggca
     6001 ttgggaagat tgatctccgt cacgtgggcc ggacgattgc cccaggtggg cgcgccaact
     6061 ttggtgatct ttccgccttc aatcaccagc gtggggttgt tgagaagctg gccggtcttc
     6121 acgtcgagca tgtggccggc gtgcaggaca ataatcccat caccatcttc cttggcttgc
     6181 agagcggaag cagggacaca gttgaagcag agaaatgctg caagcagcac gagcaggtag
     6241 taagtgcgat tcataggtgg gcgggattat agcaggcgcg ttttttgaag cagcttatcc
     6301 cgcgttgcga tacggggttg ccgctagcga ggatgcccag gctgcatgcg gtagcagcgc
     6361 gcctcaacat cccagatgat ctggtctttg tgctcctgcc agaaatagtt ccacttctct
     6421 tgcagtccgc tacggcgatg cgtgcggaca aagctgcgca gcacctgttc tggtgtgagc
     6481 gcgggtgagc tgcgctccag aaatgtgtcc cattccagtt cgtgtgcggt agaacggcca
     6541 gccggatctt taaaaagatc gagaagcacg atgagcgcaa catcgccaac ctgcatgccg
     6601 tgccagccgc aaaggatggg atggttcaaa ggatggccgt tgctgattac cttccccaga
     6661 gaatccaccg aattcacgcc atgatgctga acgtgctcca tgatgttttc gcggttcttc
     6721 aggtcggaat cctgcactcg tccctgattg atacagttcc cctgcgaaag cttgatcaaa
     6781 tcaaaatgcg gattgtcaga cgattgctgg gcagcaaggg tgccggcgaa gagtacaagc
     6841 aggacacaca ggggtttcat agcaagcaga ttgtgtgtct gaaggggaga tggatgcagt
     6901 ggcggccatc acatggcttt tgctggcgtt tgtagattgc aaatgaatca gtgaggcctt
     6961 ggatcacgcg gccattcaag ccttagccac taaatccaag aagatcatag agatccctcg
     7021 cctcgctcgg gattttagaa acatgcgttc gaattgccca gattatctgg tcttttccgg
     7081 caccgacgcc gggatcagcg cctccagggg cacgaactcg gtcggataaa taccggtgta
     7141 acaagaagtg cagtaggtag ttttctcgcc ttcagcgcag gcttcgcgta gcccttccag
     7201 ggtaaggtag gcgagcgagt cagccccgat gtaatcgcgg atttcttcca aagatttgtt
     7261 ggccgcgatc aactggttac gcgaaggcgt gtccacaccg taatagcagg gcgagatggt
     7321 gggcgggcag gagatgcgca tgtgaacttc ttttgcccca gcatcgcgca ccatgcggac
     7381 aatcttgcgg ctggtggtgc cgcgcacaat ggaatcgtca atcagaacta cgcgcttacc
     7441 tgccagcagg ctgcgcacag gattgagctt cagcttcacg ccgaagtcgc gcacgcgctg
     7501 ctccggctcg atgaaagtgc ggcccacata gtgattgcgg atcagtccga agcggaacgg
     7561 aatgccggcc tccgcggcgt agcccagagc tgcggtgacg ccggagtcag gcacggggac
     7621 aacgacatcc gcgggaacac cggattcaat ggccagacga cggcccatgg cttcgcggct
     7681 tgcctgcaca ggacggccaa agaccatgct gtccggccgg gagaagtaga catgctcgaa
     7741 gatgcaggcg gacttcttca gttccgcgcc gaagaagcgc gaagaagttc cttccggccc
     7801 aaccactacc atctcgccgg gcttcacgtc gcgttcgtat accgcaccga tcagatcgaa
     7861 ggcgcatgtt tcagaggcaa aaactatagt gtcgcgctcc gatccaccac cgttgtggat
     7921 gcgtcccatg gaaagcggac ggaagccgcg cggatcgcgg acggcaaaga cgcggtcgcg
     7981 ggtcatcatg accagcgaga atgcgccttc aatgcggcgc agagcgtcgc agactgcttc
     8041 aggcaacgtc tgctcttttg attgcgcaat cagatgaacg ataacttcgg tatcgctggt
     8101 ggtctggaag atcgagccct gggcctccag acgtgcgcgg atctcccatg cattgaccag
     8161 attcccattg tgcgcgaggg cgatcatgcc cttgttgcag tccaccatga ttggctgggc
     8221 gttgagcacg gcggaatcgc cggcggtgga atagcgcgtg tggccgatcg caagggttcc
     8281 gcgcagcttc gccaggactt cttccgtgaa aatgtcggcc actgttccca tggctttgtg
     8341 aactcgtgaa gttaggccgt cagaggtaac gaccc
//
LOCUS       DASQYP010000051         3246 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_255721, whole genome shotgun sequence.
ACCESSION   DASQYP010000051 DASQYP010000000
VERSION     DASQYP010000051.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 3246)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3246)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3246
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_255721"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1002)
                     /locus_tag="VE783_01360"
     CDS             complement(<1..1002)
                     /locus_tag="VE783_01360"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain S-box protein"
                     /protein_id="HYX52067.1"
                     /translation="MSSPATRLAPSQVHQSIGASGWVLSAFALTIFVDWALHVSFLAG
                     VAALNPRWEAAFSLAVVLASVMLYLMLLIIRNAARADREAIALRESEKRFRVIANAAP
                     VMIWISGTDKLCNYFNDPWLKFTGRTLEAETGNGWADGVHPDDISSCMQTYLGAFDGR
                     ESFQMQYRLRRHDGQYRWVLHNGVPRFSDDGYFAGYFGSCIDITDSKLAEKALAEMGH
                     KLIEAEENERRWIARELHDDINQRIAALAFELERWGEDLSASATEFHNFVSQFVQQLS
                     HLGTDIQSLSHHLHSSRLEYLGLVAAADSFCRELAQNHKLEIDFIHDTLPEIPREIAL
                     "
     gene            1258..1331
                     /locus_tag="VE783_01365"
     tRNA            1258..1331
                     /locus_tag="VE783_01365"
                     /product="tRNA-Gln"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1290..1292,aa:Gln,seq:ctg)
     gene            1446..3134
                     /locus_tag="VE783_01370"
     CDS             1446..3134
                     /locus_tag="VE783_01370"
                     /inference="COORDINATES: protein motif:HMM:NF004952.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S1"
                     /protein_id="HYX52068.1"
                     /translation="MDNPSIPDTPATPENNESFSDILTQYERSHTHKPEAGTQGLEGT
                     VVAVTADSVLLDIGYKTEGILPLSYFQEQNEAVKPGDKLIVNIKGRDPEGYYELARGR
                     VRRPTDWSALEKAFAEKAVIAGTVSGLVKGGLTIDVGVRAFMPASRTGTRDSAEMEKL
                     VGQEVRVRITKLDVTDEDVVVDRRGVLEEEERANKERRYAELKEGDTVHGTVRSLTDY
                     GAFVDIGGTDALLHVGDISWARVSKPSDVLSVGQEIEARIAKIDAEKHRISLSVKQLQ
                     PHPWEQASDKYKVSERVSGVVSHIVDFGAFVELEPGVEGLIHISELSWSRRIKKVSDV
                     VKNGDTVEAVVLGMNPADRRISLGLKQTLGDPWVEAGQRFVVGTIVEGPITNITKFGA
                     FVQVAEGVEGMIHVSDISAEKRINHPQDVFKVGQTLKAQVLEIDKEKRRLRLGIKQMA
                     PSSLDEYIAEHKVGDQVTGRMGEVSGGYAQVELGEGVFGVCHVKAGAAATAAQESGAA
                     AKADLSSLSSMLQARWKSGSANQVRSQVTSGQVRSFKISKLDPATKKIELEMAT"
BASE COUNT          760 a          844 c         1003 g          639 t
ORIGIN      
        1 aagagcgatc tcccggggta tttccggcag cgtgtcatga atgaaatcaa tctcgagttt
       61 gtgattctgg gccagctccc tgcagaagct atcggcggcc gcgacaaggc ccagatattc
      121 gagtctggag gagtgcagat ggtgcgacaa actctgaatg tctgtgccta gatgagaaag
      181 ttgctggacg aattgactga cgaaattgtg gaactcggtc gcagaagcgg aaaggtcctc
      241 cccccagcgt tccagttcga aggccaaagc cgcgattctc tggttaatat cgtcatggag
      301 ctctctggca atccatctgc gctcgttttc ctctgcctcg atcagtttgt gccccatctc
      361 cgcgagggct ttctcggcca gcttgctatc ggtaatgtcg atgcacgagc cgaagtatcc
      421 ggcaaagtat ccgtcgtcac tgaatctcgg caccccgtta tggagcaccc agcggtattg
      481 tccatcgtgt cgtcgcagcc tgtactgcat ctggaaagat tcacggccat caaaggctcc
      541 tagataagtc tgcatgcagg agcttatgtc atccgggtgc actccatctg cccagccgtt
      601 gcccgtttcc gcttcaagag ttcggccggt aaacttcagc catgggtcat tgaaatagtt
      661 gcacagcttg tcggtgccgg agatccagat catcaccggc gctgcgtttg caatgacacg
      721 aaagcgcttt tcgctttccc gaagtgcaat tgcttctcga tcggctcgcg cggcgttccg
      781 aatgatgagc agcatgagat aaagcattac tgaggcaagg accacagcaa gcgaaaatgc
      841 cgcttcccac cgcgggttca aggcggccac gccagcaagg aaagagacgt ggagtgccca
      901 atcaacaaag atggtcaggg caaaggcgga cagaacccag ccactcgcgc cgatcgactg
      961 atgaacttgt gagggagcaa gacgtgtggc gggggatgac atactgcgga aagactcctt
     1021 atcgagagta gaagcctcca agtggcggtc gtcggtgact ttcgtcacac tgtccgtgtt
     1081 acctgtttca ttttgagcga tggacggaac tgagcgggaa gcagtccgtg cacggcgaga
     1141 tgttcgctgg ttcggagtga tcgcttgtgc gttgacgaac aggacatttg acctgcccgg
     1201 aaagccatca taaaatcaag aagaaccagt gctcaccaac tggcttttct tcattgctgc
     1261 cccctcgttc aacggcagga cagctgactc tggatcagca tatcggggtt cgaatccctg
     1321 gggggcagcc aaatctacga aactcgcctt cgtttctcaa cacttttttt agacgttcgc
     1381 tttgcgtata agccctgcgg accagtggta tcctattgaa atcacatacg agaactcaca
     1441 cattcatgga caatcccagc atcccggata cccctgcaac tcctgaaaac aacgagtctt
     1501 tcagcgacat tctcacgcag tacgagcgca gccacacgca caagcccgag gcaggcacgc
     1561 agggtctgga gggcacagtg gtggccgtta cggccgattc ggtactgctg gatatcggct
     1621 acaagacaga aggcattctg ccgctgtcct attttcagga acagaatgaa gccgtaaaac
     1681 caggcgacaa gctgatcgtc aacattaagg ggcgtgatcc ggagggctac tacgagctgg
     1741 cgcgcgggcg agttcgccgt ccgacggact ggagcgcgct ggagaaggcg tttgctgaga
     1801 aagctgtgat tgccggcacc gtatccggcc tggtgaaagg cgggctaaca atagacgtgg
     1861 gagtgagagc gtttatgcct gcttcacgca ccggcacgcg cgactccgcc gagatggaaa
     1921 agctggtggg gcaggaagtt cgggtacgca tcaccaagct tgatgtaacg gatgaagatg
     1981 tggtggtgga ccggcgaggg gtgctggaag aagaagagcg cgccaacaag gagcgacgct
     2041 acgcggagtt gaaagagggc gataccgtac acggcaccgt tcgcagcctg accgattacg
     2101 gagcgtttgt tgatatcggc gggacggacg cgctgctgca tgtaggcgac ataagctggg
     2161 cacgtgtgag caagcccagc gatgtgcttt ccgtgggcca ggagatcgaa gcgcgcattg
     2221 caaagattga tgcggagaag caccgcatct cgctcagcgt gaaacaactc cagccgcatc
     2281 cgtgggaaca ggccagcgac aaatataaag ttagcgagcg cgtaagcggc gtggtcagcc
     2341 acattgtgga ctttggcgcc tttgtagagc ttgaacccgg tgttgaaggg ctaatccata
     2401 tctctgagct gtcatggtcg cggcgcatca agaaggtcag cgatgtggtg aaaaacggcg
     2461 acacggtgga agccgtggtg ctggggatga atccggctga ccggcgcatc tcgctggggc
     2521 tgaagcaaac gctgggcgat ccgtgggtag aggcaggaca gcgatttgtg gtcggtacga
     2581 tcgtggaagg cccaatcacg aacatcacaa agttcggcgc gtttgtgcag gtagcggaag
     2641 gcgtggaagg gatgatccac gtgagcgaca tcagcgcgga aaaacggatc aaccatccac
     2701 aggatgtgtt caaagtcggc cagacgttga aggcccaggt gctggagatc gacaaagaga
     2761 agcgccggct gcggcttggc atcaagcaga tggctccatc aagcctggat gagtacattg
     2821 ctgaacacaa agtcggcgat caggtgaccg gacgcatggg tgaagtttcc ggtggctacg
     2881 cgcaggtgga attaggtgaa ggcgtgttcg gtgtgtgcca cgtgaaggca ggcgcggctg
     2941 ccacggccgc tcaggaaagc ggcgctgctg caaaggcgga tctttcatcc ctcagctcga
     3001 tgctccaggc gcgctggaag agtggcagcg cgaatcaggt gcggtcacag gtcacgagcg
     3061 gccaggtccg gagcttcaag atcagcaagc tggatccggc tacgaagaag atcgagctgg
     3121 agatggccac ctaatcgccg acatttcacc ccaaaagcca acagcgggct tttcggggac
     3181 cccgacatcg ccgtgagcgc aacgtgatcg ccgtaatcgg aaaggcgggg aagtgcccgg
     3241 tcggcg
//
LOCUS       DASQYP010000052        16043 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_234631, whole genome shotgun sequence.
ACCESSION   DASQYP010000052 DASQYP010000000
VERSION     DASQYP010000052.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 16043)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16043)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16043
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_234631"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1238
                     /locus_tag="VE783_01375"
     CDS             <1..1238
                     /locus_tag="VE783_01375"
                     /inference="COORDINATES: protein motif:HMM:NF019869.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006418 - tRNA aminoacylation for protein
                     translation [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="class I tRNA ligase family protein"
                     /protein_id="HYX52069.1"
                     /translation="PTSLLITGFDILFFWVARMIMLGCHFMADHPQGSVPFKEVYIHA
                     LVRDADRQKMSKTKGNVLDPIEVTEKFGTDAVRFTLASMASPGTDIAFSESRTDGYRA
                     FANKIWNAARFMFMHLDRVGGVSITGGEPKDAQNNLEYRWILSRLNHVAGTVNQSLTE
                     YRFDEAANTVYSFFWGEFCDWYLEIIKPRLTGSETEARSALAFLGYVFEAALRLLSPF
                     MPFITEEIWHAMYEGKPPSKSISLTRYPQCDPAELNNEAEEQMALLQELIVNIRNLRA
                     ELKVETKEKTGVRIHAGADIEKLVNENRSMLERLANVEGIQFVPESLAKEKVSRATAR
                     FEVTLIYEQKIDIAAETERLTKELKKNQTLLAAAEARLTNEQFLSKAPPHVVEGLKKQ
                     VEELRIVIQKLQRRLDELK"
     gene            1248..2126
                     /gene="nadC"
                     /locus_tag="VE783_01380"
     CDS             1248..2126
                     /gene="nadC"
                     /locus_tag="VE783_01380"
                     /EC_number="2.4.2.19"
                     /inference="COORDINATES: protein motif:HMM:TIGR00078.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004514 - nicotinate-nucleotide
                     diphosphorylase (carboxylating) activity [Evidence IEA];
                     GO_process: GO:0019363 - pyridine nucleotide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carboxylating nicotinate-nucleotide
                     diphosphorylase"
                     /protein_id="HYX52070.1"
                     /translation="MEWHSRRISAILENALLEDKATSDATTRACIDPQQRATATILAK
                     QDSILSGVGAIARILEIYETLDQNVIGHPEVISHGEIFDGVRLKKGQVIAVVRHNARV
                     LLSCERVILNILQRLGGIATYTRQFVEAVQGTSVKILDTRKTVPGLRVLDKYAVRCGG
                     GHNHRLDLSDGVLIKNNHIALAGGVAGVLHRAIRNRRSEQPIVIEVRNLAELEEALAN
                     GAEQVLLDNMTVDTVKGAVERVKEAGRKVPLEVSGGIRLDNVREYAETGVDYISVGVL
                     THSPRAVDLSMRIVPA"
     gene            2415..3026
                     /locus_tag="VE783_01385"
     CDS             2415..3026
                     /locus_tag="VE783_01385"
                     /inference="COORDINATES: protein motif:HMM:NF016176.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YceI family protein"
                     /protein_id="HYX52071.1"
                     /translation="MRNKLFVLLLGVVAFYGSALAADEFKIDPVHSTVAFSVKHMVVN
                     TVHGRFNDYSGTILLDDKDPSKSSVEVSIKTASINTDNAQRDGHLKSPDFLDAAKYPE
                     ITFKSNSVEKKGDGYMAHGTLAIRGVSKNVDMPFKLNGPINVGGSSLLGAEASLTINR
                     QDYGVSWSKTLDGGSLVVSNDVKIDINVEAKQAKPAAAAGASK"
     gene            3049..3909
                     /locus_tag="VE783_01390"
     CDS             3049..3909
                     /locus_tag="VE783_01390"
                     /EC_number="6.3.4.15"
                     /inference="COORDINATES: protein motif:HMM:TIGR00121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004077 - biotin-[acetyl-CoA-carboxylase]
                     ligase activity [Evidence IEA];
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="biotin--[acetyl-CoA-carboxylase] ligase"
                     /protein_id="HYX52072.1"
                     /translation="MSTELLLPEKLVPLVRNTIFSGNIRFYESTESTNSLAVEIGEQQ
                     SKSPEHAPEGVVFLADEQTRGRGRGAHAWHSERGTGIYCSFLLHPPMSPADALWLSLI
                     SGIAVQDAVREMTGLQADIRWPNDLLLNAKKFAGILTETNSEGSHVNYAVIGIGINVN
                     QAQLPAELAEIATSLRMESGKEWPRLEFAGALIRALDREYRGLLRAMNSPIRTPALRF
                     EPIIRRVESRSSYAHGKLVHVEEDGGYSGVTDGLDPRGFLRVRTDRGMRMVVSGTVRP
                     LARRDDAAGS"
     gene            3893..4708
                     /locus_tag="VE783_01395"
     CDS             3893..4708
                     /locus_tag="VE783_01395"
                     /EC_number="2.7.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011996181.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III pantothenate kinase"
                     /protein_id="HYX52073.1"
                     /translation="MLLVLDVGNTNTVLGVYQMGTPGFTGSHNPKLIAHWRVATIKTH
                     TVDEYGVLFRNLFAFGKIESTEVRGIIISSVVPPMDSTLREVCERYFHLKPLFVEPGI
                     KTGMPIHYDNPQEVGADRIVNGVAAFEKYGGPCVVVDFGTATTFDAVSRKGEYMGGVI
                     APGIGISAQALFEHTARLPLVDIRQPSKLIGTNTVGSIQSGLFFGYLGLVDGILERIT
                     EELGPGTKVVATGGLAPLIGSSSKHIKEVDDLLTLDGLRIIWERNTTVQKQKA"
     gene            4714..5406
                     /locus_tag="VE783_01400"
     CDS             4714..5406
                     /locus_tag="VE783_01400"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52074.1"
                     /translation="MENYFNYFTEIEHRYQKRRGTGLLLSTVDWALIETWKDAGIPLE
                     AVLRGIDETFDKYEKRPAKPKKINSLTYCSQEVLSAAEEMKEAAVGAATTKPGGAPGL
                     EQQQIVNYLAKNAGLLRAVKEPEQVAKVAAECASAIDEVAAEISSKSEIGRLEDVERR
                     MTVLEEKLLAALTVTAEESRLVQLRAEAEREIAPYRSKMPGPQIQQLIKQFVHKRLFE
                     QAKMPRLSLFYM"
     gene            5403..6674
                     /gene="rlmD"
                     /locus_tag="VE783_01405"
     CDS             5403..6674
                     /gene="rlmD"
                     /locus_tag="VE783_01405"
                     /EC_number="2.1.1.190"
                     /inference="COORDINATES: protein motif:HMM:TIGR00479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008649 - rRNA methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (uracil(1939)-C(5))-methyltransferase
                     RlmD"
                     /protein_id="HYX52075.1"
                     /translation="MNLTIEKMIYGGDGLARLSDGKAVFLPFVLPGEEVSATIAREKS
                     SFARATADQVLKASEKRVTPHCPYFGSCGGCHYQHTDYNTQLEFKKAILRETFQRNAK
                     LEWNGEIITHGSEPWGYRNRTRMKVRGGEDFALGYHRFGTHDLLPIAECPISSNAINL
                     VIKQLWEAGRAGGVPADVTEIEFFVDQADARLVLEVIHKPGAKRIREFAGELQNRIPN
                     IQGVGIFEEGPPGANALPELKDSLGNPSLLYQVGEKAFRVSAGSFFQTNRFLINELVK
                     TVVADFFGNIALDLYSGVGLFANHLAKRFTQVFAVESAPASAADLQTNVLKNVIPVKT
                     PVEQFLPRCLNMNPEIVVVDPPRAGMGINTTQLLASLRVKKICYVSCDPATLARDLKL
                     LLETGYNVEEVHMVDLFPQTFHIETVVRLGR"
     gene            6707..9313
                     /locus_tag="VE783_01410"
     CDS             6707..9313
                     /locus_tag="VE783_01410"
                     /inference="COORDINATES: protein motif:HMM:NF015714.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ComEC/Rec2 family competence protein"
                     /protein_id="HYX52076.1"
                     /translation="MQAGSSSLPAPLAVAAASFAAGILIADRLYRPAGLWFSAACLLT
                     TCAMVGNRHARVYLARFAVIAALVCAGAFGRSGTPPARLEVTPLQFINGDPVEVTGFV
                     SSDAQLLPGGDRQRMDVIAESMKLGSETFSKPTGLRITFYARDIAFDPEGEAADEHTV
                     PRLAYGQRLRFVAKLRPPRNFKNPGAFDYEGYLRGLGIVAVGSGAAEVLQLLPGQAGT
                     RLGRWRSSIRRSLMAHITGARYALWSHEDGAIFAAMIIGEDSLLLRDVREEFQATGVY
                     HLLVVSGMNVGLLAFAVFWLARRTRAPEWLASAITAGLACFYAYVAGMGVPIQRAVLM
                     LCLYLLARLFYRGRAPLNATGFAALGVLVISPQALYEPGFQLTFLALLAIAGISVPIL
                     ERTSEPARKALLHLDSTSYDLALAPKLAQFRLDLRLAIGRLERFVGRLPARWMVRGSA
                     SLVIAIFEILVVSAITQATLVLPMRAYFHRTAIIGLPANVLVLPLAGLMLNSGVAAIA
                     LSYFSLSFARLAGWLAAAALHWTLACLHRLGHFHISLQRLPDPNAALWIIATIAVITA
                     LALVRRRPAVVWGGLAVLFTAAWVCALYTGKPQTFTGKLEVTTIDVGQADSILVISPE
                     SKAMLVDAGGSLGPVRSEFDYGEDVVSPYLWSRGIERLDVVILTHAHADHIAGLARII
                     QNFRPRELWVGRNPATAAMEHVYETASEAGVSVQTHVAGETLAWGGAKIRFLSPPANW
                     LTKARPDNNDSLTFLISFDHSSALLAGDVQKKIEEFIATESPRADLLKVAHHGSATST
                     TPDFVAAVQPSFAVISVGRNTFGHPRAEVLERLQQNHVRTYRTDRFGAVTFLLDGKRV
                     QPVLTNLASGLP"
     gene            complement(9379..10572)
                     /locus_tag="VE783_01415"
     CDS             complement(9379..10572)
                     /locus_tag="VE783_01415"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF025072.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HYX52077.1"
                     /translation="MKIALICCPFKTSYGAYADSLRAELEKLGGNTVQWVGSNCGCGD
                     PIETSRAFQTKDCSYFDMPILVDFRSKTPWKRKARGAARSVILYARAKRYAELSAGAD
                     VVHFQQILNAYGSKAVFPWLKRPSDAARVITVHELDPDQQERPETNLTYNLADAVLVH
                     CEDLRQQLTKLGVQPEKVHVMLYGTNVPPPAPDALRDGIVFYGGHKLMTGKGIDTFFQ
                     AMAMVKERLGARMPRLKIHGHFGPVTPEGGKELAAANGLTEITDWLNQIDDQKIFTLY
                     QHSLVCVLPFTGSFAGLPAAMAGICGLPVVCTRKAGLPDHLGESGIYIDEKNPQQLAD
                     RALELLTDQARWQRASDGILQRAQENLTWEVIARKTYNIYQQAIANRKKKHQSVEEEA
                     MALSR"
     gene            complement(10657..11838)
                     /locus_tag="VE783_01420"
     CDS             complement(10657..11838)
                     /locus_tag="VE783_01420"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF024871.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HYX52078.1"
                     /translation="MRLCFVCPNLRAKLENGGEDLLFRYADAWNELCDRATAAPFHRP
                     EWIRAYLQAFEPKAEVTLLTISSGEKLLAVLPLLQQRGWYAGVPVAKLAGPGNAHSVR
                     FDLVVAPELALETAVSLMWAELKRMPGWQLLMLPVFPQRGGCDMMIQLAAAEGHHTLT
                     YLFQDSPILRMPSNDAGKLDPFARTNRHFRHELRRYARLLEEETGHTPRLVCHIDDDP
                     NRLSKFYELEAAGWKGERGSAIACDPGTRRFYDAIAQEGSRRGYFCLHTLETNGTVAA
                     AAFSVKTEHCFAPMKIAYDESLHRGGPGQLLFNGILQECAERQIPEFFFGGAKDRYKT
                     SWTEETLPHFNGYIFRPGVLGRLAYESRTRILSPLGQLRRRMKERMKERKRDQTPGRA
                     A"
     gene            12368..14269
                     /gene="selB"
                     /locus_tag="VE783_01425"
     CDS             12368..14269
                     /gene="selB"
                     /locus_tag="VE783_01425"
                     /inference="COORDINATES: protein motif:HMM:TIGR00475.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003746 - translation elongation factor
                     activity [Evidence IEA];
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0001514 - selenocysteine incorporation
                     [Evidence IEA];
                     GO_process: GO:0006414 - translational elongation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="selenocysteine-specific translation elongation
                     factor"
                     /protein_id="HYX52079.1"
                     /translation="MKPIIIGTAGHIDHGKTSLVKALTGIDADRLEEEKRRGITIDLG
                     FAHLELTAPSGERLRLGFIDVPGHERFVRNMLAGVGGIDLVLLVIAADESIKPQTREH
                     FEICRLLSVPRGITVITKADLVDEDTLSVVKLEVEDFVRGSFLDASRSPIIAVSALKG
                     AGLDELKREIVRLAADIPARDTEAILRLPVDRAFVMKGFGTVATGTLIAGKVKKEDEV
                     EIFPSGKRARVRGLQVHGASTEQAIAGQRTAVNLSGVQVEELGRGMTLAPLETLGTTQ
                     RIDVQISLLKDARPLRNRARVHLHAFASETIAEVTLHEGGELKPGNTAVAQLRTEDPI
                     VVLPGDRAILRQFSPVITIGGALVLDAFPLPRQKKQARLSFLKSLIGGSREESVLARV
                     GRAGKNGSSMRATVRETGLKSSLLKPMFSALVQQGRIVQSGELYIAPDAFKTTREAAL
                     LALDSFHKANPLVAGISKEELRSKLDLNPGVMEGLLVQLVRDKKVEVAGEQVRLSGRG
                     VELKDEEAKAKEQIEKAFAAAGLKVPLMKEVLATVPVDKVRAQKLVTLLLRDRVLVKL
                     ADELVFHHSALHQLRDMIAGYKTRSLKIDVGAFKDLTGVSRKYAIPLLEYLDRERVTR
                     RVGDERVIV"
     gene            complement(14287..15624)
                     /locus_tag="VE783_01430"
     CDS             complement(14287..15624)
                     /locus_tag="VE783_01430"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="catalase family protein"
                     /protein_id="HYX52080.1"
                     /translation="MKKILILALKWLGGIVLLLALAVIYLYNHDRGPSDAPMGEHVTA
                     NEDFLTAEIVRSAIDVSIQDRTKLIQNTAAHEPPPTTDKTAPGFRSHNYQRDVHTKGH
                     GCVKATFKVDRVPPQFAFGVFAKPAEYDALVRFSSGNPGVFPDSEKDARGIAIKLFNV
                     PGKKLLPGEEDDTTQDFLLMNNPIFFFRTIEEYAQFNQMLAYNDALHYFINPRVSPLR
                     WHLRELKLLFDTKKKPPESLLTEPYWSASAYALGPSQYVHYKMVPCDRNKPMLDAKAK
                     REYGYDFLRLDLAKQAATGGACFDFMVQPQVPGKNMPVEDTTVEWSESDSPFVKVASL
                     ELKPDPDMNTAERNTQCEGLSYNPWHSLVEHRPVGVMNRARKALYQEMGRFRRAKNCP
                     EFCQDKCSAGNCAAGCVEGCVSACPLLNEPAGTELPAGACKAEPALKAKLQAK"
     gene            complement(15621..>16043)
                     /locus_tag="VE783_01435"
     CDS             complement(15621..>16043)
                     /locus_tag="VE783_01435"
                     /inference="COORDINATES: protein motif:HMM:NF045061.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52081.1"
                     /translation="LAGIWATPPFLHNGSVPTLYQMLVPAYERSKKFYRHTTLFDPYA
                     VGLQSDASEKGAFLFDTSRTGNSNQGHEFRAGYQPWTPGSPPSYGVIGPELTEHQRWA
                     LVEYLKVHRDDPNDHSCSVYIPPPPPRCRPSSTRCELP"
BASE COUNT         3380 a         4491 c         4709 g         3463 t
ORIGIN      
        1 atccaacatc gctgctgatt accggctttg acattctgtt cttctgggta gcccgcatga
       61 tcatgctggg ttgccacttc atggcggatc atccccaggg cagcgttcct ttcaaagagg
      121 tttacattca cgctttggtg cgcgacgccg accggcagaa aatgtcgaag accaaaggca
      181 atgttctgga cccaatcgag gtcacggaga agttcggcac ggacgcggtc cgcttcacgc
      241 tggcgtccat ggcatcgccc ggaactgaca tcgccttcag tgagagccgc actgatggct
      301 atcgcgcctt tgccaacaaa atctggaacg ccgcccgctt catgttcatg caccttgatc
      361 gggttggcgg cgtcagcatc accggcgggg agcccaaaga tgcccagaac aaccttgagt
      421 accgctggat tctttcgcgg ctgaaccacg tggccggtac cgtcaaccag agcctcaccg
      481 agtatcgctt tgacgaagcc gcgaacacgg tttacagctt cttttggggt gagttctgcg
      541 actggtacct ggaaatcatc aagccacggc ttaccggatc ggaaaccgaa gctcgatcgg
      601 cgctggcgtt ccttggctat gtttttgaag cggcattgcg gctgctctcg ccgttcatgc
      661 cttttatcac cgaagagatc tggcatgcca tgtacgaagg caagccacca tcaaaatcca
      721 tttcgcttac acgatatccg cagtgtgatc ctgcggaact gaacaatgaa gctgaagagc
      781 agatggcact gcttcaggaa ctgatcgtca acatccggaa cctgcgtgcg gaactgaaag
      841 tggagacgaa ggagaagaca ggcgttcgca tccatgccgg cgccgatatc gagaagctcg
      901 tcaatgagaa ccggtcaatg ctcgagcgtc tggccaacgt tgaaggcata cagtttgttc
      961 ccgagtcgct tgcgaaagag aaggtttccc gcgctactgc tagatttgaa gtcaccttga
     1021 tctatgagca aaaaattgat attgcggctg aaactgagcg cctcacaaaa gaacttaaga
     1081 agaaccaaac gttgctggca gctgcggaag ctcgcttgac gaatgaacaa ttcctttcga
     1141 aggccccacc gcatgtggtt gaagggttga aaaagcaggt ggaggagctc aggatcgtca
     1201 ttcagaagtt acagcgacgc ctcgatgaat taaagtaatt cacagctatg gaatggcaca
     1261 gccgaagaat cagcgcgatc ctcgaaaacg cgctgctgga agataaagcc accagtgacg
     1321 ccaccacgcg cgcctgcatt gatccgcagc agcgggccac cgccaccatc ctggccaagc
     1381 aggattccat cctgtccggc gtgggcgcta tcgctcgcat ccttgaaatt tacgaaacgt
     1441 tggaccagaa cgtaatcggg catccggaag tgatcagcca cggtgaaatt tttgacggtg
     1501 tgcgcctgaa aaagggccaa gtgatcgcgg tggttcgcca taacgctcgt gtgctgctct
     1561 cttgcgagcg agtgatcctg aatatcttgc agcgcctggg cggaatcgcc acctataccc
     1621 gacagtttgt agaggcggtg cagggaacca gcgtgaagat acttgacacg cggaaaactg
     1681 ttcccggcct tcgcgtgctg gataaatacg ctgtccgctg cggcggcggc cacaatcacc
     1741 ggctcgatct ttccgatgga gtgctgatca agaacaacca tatcgcgctg gcgggcgggg
     1801 tcgccggagt gctccatcgc gcgattcgca atcgccgcag cgagcaacca atcgtcattg
     1861 aagtccgcaa cctggccgaa cttgaggaag cgctggccaa cggcgccgaa caggttctgc
     1921 tggacaatat gacggtcgac acggtcaaag gagctgtcga gcgcgtaaaa gaggcaggcc
     1981 gcaaggtgcc gctggaagtt tctggcggta tacggctgga caacgtccgc gagtatgcgg
     2041 aaaccggcgt cgactatatc tccgtgggcg tgctcaccca ctccccccgg gcagtcgact
     2101 tgagcatgag gattgtgcca gcctgatctg cgtttatact aggcaattcc agggctacag
     2161 gatgcatcag ataagccttg gcagggagcg gcagcgaacc gctccagact tggttcttcc
     2221 gaaaactctg tgtggccttc gtcccagtct cctctggctc gcgacggcca aagtacatgt
     2281 aagtatctga aagtaaagcg ccaggcgacc ggatgacacc tctgcatcca tttgccggag
     2341 ccgttatttt tgtatcgttt gctggatgag tgtgctccaa tagcaaaact ttgttaagga
     2401 gacgtttgct cgatatgcgg aataagctct tcgtgctgtt gctcggagta gtggctttct
     2461 acggctcggc tctggctgcc gatgaattca agatcgatcc tgttcattca actgtagctt
     2521 tctcggttaa gcacatggtc gtgaacacgg tccatgggcg cttcaacgat tacagcggga
     2581 caatcctttt ggacgataag gacccatcca agtcctcggt tgaggtcagc atcaagacag
     2641 ccagcattaa tactgacaat gcgcagcgcg atggccacct gaaatctcct gactttttgg
     2701 acgcggctaa atatccggaa atcaccttca aaagcaattc cgtggagaaa aagggagacg
     2761 gctacatggc ccacggaacg cttgccatac gcggcgtttc gaagaatgtt gacatgccgt
     2821 tcaagctgaa tggccccatt aacgtggggg gttccagcct tctgggtgcg gaagccagcc
     2881 tgaccatcaa ccgccaggat tatggcgttt catggagcaa gactctggac ggcggaagcc
     2941 ttgtggtaag taacgacgtg aagattgaca tcaacgtgga agccaaacag gccaagccgg
     3001 ccgctgcggc aggcgcgagc aaataaaccg tcaagagatt ctgaagtgtt gtccaccgag
     3061 ctactattgc cggaaaagct tgttccgctg gtgcggaata cgatcttttc cggcaatatc
     3121 cgtttttacg agagcaccga gtcaaccaac tctttggcgg tggaaatcgg cgagcagcag
     3181 agtaagtcgc ccgagcatgc gcctgagggg gttgtctttc tggccgatga gcaaacgcgt
     3241 ggccgcgggc gcggcgctca tgcctggcat tccgagcgtg gcaccggcat ttactgctct
     3301 ttcctgctgc atccacccat gtctccggca gacgctttgt ggctttccct gatttccggg
     3361 attgcggtgc aggacgcggt aagagaaatg accggacttc aggccgacat acggtggccc
     3421 aacgacctgc tgctcaacgc taagaagttt gccggcatcc tgacggaaac aaattctgag
     3481 ggttcgcacg tgaattatgc cgttatcgga atcggcatca acgtgaacca ggctcagctc
     3541 ccagccgagc tcgcagagat tgcaacctca ctgcgcatgg aatcaggaaa agagtggccg
     3601 cgactggagt ttgcaggtgc tttgattcgg gccctggacc gcgaataccg tggcttgctg
     3661 cgcgccatga acagccccat acgcacaccg gcgctgcgct ttgaaccgat tatccggcgc
     3721 gtagaatcgc gctcttcata tgctcacggc aagctggtgc atgtggaaga agatggtggc
     3781 tacagcggcg ttactgacgg gctggatccc cgcggctttt tgcgcgtgcg cactgaccgg
     3841 ggcatgcgca tggtggtttc gggcaccgtt agacctctcg caaggagaga tgatgctgct
     3901 ggttcttgac gtcgggaaca cgaataccgt gcttggcgtc taccagatgg gaacgccggg
     3961 atttacgggc agccacaatc ccaaactgat tgcacactgg cgggtagcca ccatcaagac
     4021 acacaccgtg gatgaatacg gtgtgctctt ccgcaatctg tttgcgttcg gcaagatcga
     4081 atctactgag gttcgcggga tcatcatctc ttccgtggtg ccgcccatgg attccaccct
     4141 tcgcgaagta tgtgagcgtt acttccacct gaagcctctg tttgtggagc ctgggatcaa
     4201 gacgggaatg ccgatccatt acgataaccc gcaggaagtg ggagcggatc gcattgtgaa
     4261 cggcgtggcg gcgtttgaaa aatatggtgg cccctgcgtg gtggtggact ttggtaccgc
     4321 aacaactttc gatgcggtct cccgcaaagg cgagtatatg ggaggcgtaa tcgccccggg
     4381 gatcggcatt tcagctcagg ctctgtttga gcacactgcc cgcctgccgc tggtagacat
     4441 tcgccaaccc tcaaaattaa tcggaacaaa tacagtcggg agcatccagt caggattgtt
     4501 ttttggctat ctcggcctgg tggatggaat cctcgagcgc atcacagagg aactcgggcc
     4561 gggaacaaag gtggtggcga ccggtggtct ggcgcccttg atcggcagca gttcgaagca
     4621 catcaaagaa gtggacgacc tgttgaccct ggatggcctg cgcatcatct gggagcgcaa
     4681 cacaacggtg cagaagcaga aggcctgagc gcgttggaaa attacttcaa ctacttcacc
     4741 gaaattgaac accgttacca gaagcgccgc gggacaggcc tgcttctctc aaccgtcgat
     4801 tgggcgctga tcgaaacgtg gaaagacgcg gggattccct tggaagcagt cttgcgcgga
     4861 atcgatgaga cgtttgacaa gtacgagaag cgacctgcga agccaaagaa gatcaacagt
     4921 ttgacttact gctcgcagga agtgctgagc gcggccgagg agatgaaaga agcagcggtg
     4981 ggagcggcca ccaccaaacc gggaggcgcg cccgggctgg aacagcaaca gattgtcaat
     5041 tacctggcga aaaatgccgg gctgctgcgg gctgttaagg agcctgagca ggtcgccaaa
     5101 gtggcagccg agtgcgcgag tgcgatcgat gaagtagcag ccgagatttc gtcgaaatca
     5161 gagatcggca gacttgaaga cgttgagcgg aggatgactg tcctggaaga gaagctgctc
     5221 gcagctttga ccgtaacggc tgaagagagc cggctggtgc agttaagagc ggaagcggag
     5281 cgggagatcg cgccttatcg cagcaagatg ccggggcctc aaatccagca gctgatcaaa
     5341 caatttgttc acaagcggtt gttcgaacaa gctaaaatgc ccagactcag tctcttttac
     5401 atgtgaatct gacaatcgaa aaaatgattt acggaggcga cggattggcc cgtctctccg
     5461 atgggaaagc cgtgttcctg ccttttgtgc tgcccggaga agaggtaagc gcaactattg
     5521 ccagggaaaa aagcagcttt gcccgggcca cggcggacca ggtgctcaag gcctctgaga
     5581 aacgcgtcac gccgcactgc ccctattttg gttcctgcgg cggctgccat taccagcaca
     5641 ctgactacaa cacgcaactc gagttcaaga aggcaatatt gcgggagacg ttccagcgca
     5701 acgccaagct ggagtggaac ggcgagatca ttactcacgg ctcggagccc tggggttatc
     5761 gtaatcgcac gcgcatgaaa gtgcgcgggg gcgaggactt tgctctcgga tatcatcgtt
     5821 tcggcacgca cgatctgctg cccatagcgg aatgtccgat cagttccaat gcgattaacc
     5881 tcgtgatcaa gcagctatgg gaggcaggcc gggccggcgg agtccctgcc gatgttaccg
     5941 aaattgagtt tttcgtggac caagccgatg ctcgcttagt gctggaagtg atccacaagc
     6001 cgggcgcaaa gcgaatccgc gaattcgcgg gcgaactaca aaaccgtatt cccaatattc
     6061 agggagtggg aattttcgaa gaaggtcctc caggcgcaaa cgcgctgccg gaattgaagg
     6121 acagcctggg caatcccagc ctgctgtatc aggtgggcga gaaggccttc cgcgtgagcg
     6181 ccgggtcttt ctttcaaacg aaccggttcc tcatcaatga gctggtgaaa acggttgtcg
     6241 ccgacttctt cggcaacatc gctctcgatc tctactcggg cgtcggactg ttcgccaatc
     6301 atctggccaa acgctttacc caggtttttg cggtggagtc cgcgccggcc tcagccgccg
     6361 atctgcagac caacgtgctc aagaacgtga ttcctgtgaa aactccggtg gagcagtttc
     6421 tgccgcgctg cctgaacatg aatcctgaaa tcgtggtggt tgatccacct cgagccggca
     6481 tgggaatcaa caccacacaa ctgctggcct cattgcgggt gaaaaaaatc tgctacgtgt
     6541 cttgtgatcc cgccacgctg gcgcgcgacc tcaagctcct gctggagacc ggctacaacg
     6601 tggaggaggt ccacatggtc gacttatttc cgcaaacctt ccacattgaa acggtggttc
     6661 ggctgggtcg ctgaagtaga atagctgcgc ttcattccga cccaacgtgc aagccggctc
     6721 ctcatcgctc cctgctccgc tggccgtggc ggctgcctca ttcgcagccg gtattctgat
     6781 tgccgaccgc ctctatcgcc ctgccgggct ctggttctca gcagcttgcc tgctcaccac
     6841 atgtgcaatg gtcggcaacc gccatgctcg ggtttatctg gccaggttcg ccgtgattgc
     6901 cgcactggtg tgcgccggcg cgtttggccg gagcggaacg ccgccggctc gtctggaagt
     6961 gacgccattg cagttcatca atggtgatcc agttgaagtc accggattcg tttccagcga
     7021 tgcgcagctc ctgccgggcg gggaccgcca gcgtatggac gtaatcgccg agtccatgaa
     7081 gctgggtagc gagacattca gcaagccaac aggtctgcga atcacgttct acgcccgcga
     7141 catagctttc gatccggaag gcgaagccgc cgatgagcac acagtcccgc ggctcgctta
     7201 cggtcagcgt ctgagatttg tcgccaagct ccgtccgcct cggaatttca agaacccggg
     7261 cgccttcgac tatgaaggat acctgcgcgg ccttggcatt gttgcggtgg gatcgggggc
     7321 cgctgaagtc ctgcagctct tgcccggcca ggccggtact cgcctgggac gctggcgatc
     7381 ttctatccgg cgcagcctga tggcgcacat caccggcgcc aggtatgcat tgtggagcca
     7441 tgaagacggc gcgatctttg cggccatgat catcggtgaa gactccttac tgttgcgcga
     7501 tgtccgcgag gagttccagg ccaccggcgt ttatcacctg ctggtagtct cgggaatgaa
     7561 tgtcggcctg ctggcctttg ctgtgttctg gctggccaga cgaacccgcg ctccagagtg
     7621 gctcgcttcc gccatcaccg ccggactcgc ctgcttttac gcttacgttg ccggaatggg
     7681 tgttccgatt caacgtgccg tgttgatgtt gtgcctctat cttctggcca ggctgtttta
     7741 ccgtggccgg gcgccgctga atgccaccgg gtttgccgcg ctcggtgtgc tcgtgatctc
     7801 accgcaggca ctctacgaac cgggttttca gcttacgttc ctggctctgc tcgccattgc
     7861 gggaatcagc gtgccaattc tggagcgcac atctgaaccg gctcgaaaag cgctgttaca
     7921 tctcgattcc acctcctacg accttgcgct cgctcccaag ctggcacagt ttcggctcga
     7981 tttgcgattg gcaatcggca ggctggagcg gtttgttggc agattgccgg ctaggtggat
     8041 ggtgcgcggc tctgccagcc tggtaattgc gatcttcgag attctggtgg tctcggccat
     8101 cacccaggcc acactagtgt tgccgatgcg ggcatacttc caccgcacgg cgattatcgg
     8161 cttgcccgca aatgtcctgg tgctgccttt ggctggactc atgctgaatt ccggcgtggc
     8221 tgcaattgca ctcagttact tcagcctctc ctttgcgcga ctggcaggat ggctggccgc
     8281 cgcggctctg cactggacgc tcgcctgtct tcaccggctc gggcattttc acatctcgct
     8341 tcagcgcctg cccgatccca atgcagctct ctggatcatt gccacgattg cggtaatcac
     8401 cgcgctggcg ctggtacgcc ggcgccccgc agtggtatgg ggtggcctgg ccgtgctctt
     8461 caccgccgcc tgggtttgcg cactttatac cgggaagccg cagacgttca ctgggaagtt
     8521 ggaggtcacc acgatcgatg tgggccaggc agattccatc ctggtgatct ccccagaaag
     8581 caaagcgatg ctggtggatg caggcggaag ccttggaccg gttcgcagcg aattcgatta
     8641 cggcgaggac gtggtctcgc cctatttatg gagccgcggt attgagcggc tggacgttgt
     8701 gatcctcacc cacgcgcacg cagatcacat tgccggcctg gcgcgcatca tccagaattt
     8761 ccgcccccgg gaactttggg ttggcagaaa ccctgcaacc gccgcaatgg agcacgttta
     8821 tgaaacagct tctgaagccg gcgtttcggt gcagacacac gttgctggag aaacgctcgc
     8881 ctggggtgga gcaaaaatcc gatttctttc tcctcccgcg aactggctta caaaggccag
     8941 gcccgacaat aacgactcgc tgaccttcct gatctccttt gatcacagca gcgccctgct
     9001 cgcaggtgac gtacagaaga aaattgagga gttcattgcc acggaatcgc ctcgcgcgga
     9061 cctgctgaag gtggcgcatc atggcagcgc cacttccaca acgcctgatt ttgttgctgc
     9121 ggtgcagccc agctttgcgg tgatttccgt tggccgcaac acatttggcc atccccgagc
     9181 cgaggtgctg gagcgcctgc aacagaatca tgtacggact taccgcactg acagattcgg
     9241 cgcagtcacg tttcttctgg atggcaagcg cgttcagccg gtgctgacaa accttgcaag
     9301 tggtctgccg tgacgcaaat tgctggcgac agcaaacctg gcctccaggc gttatccgcc
     9361 gcgctttcaa gaattggcct atctcgataa cgccattgct tcttcttcaa cgctctggtg
     9421 cttcttcttc ctgtttgcaa tggcttgctg atagatgttg tacgtcttgc gggcaatgac
     9481 ttcccacgtc aggttttcct gcgcccgctg caagatcccg tcacttgcgc gttgccagcg
     9541 tgcctgatcg gtaagcagtt ccagagcacg gtccgcgagc tgctgcgggt tcttttcgtc
     9601 aatataaatg ccgctctcgc ccagatgatc cggaagccca gctttgcgcg tacagaccac
     9661 cggcagacca cagatgccgg ccattgcggc gggcaagccg gcgaaactcc cggtaaatgg
     9721 cagaacgcaa accagcgagt gctggtacag ggtgaagatc ttctggtcat cgatctggtt
     9781 gagccagtct gtaatttcag tgaggccgtt cgcggcagcc aattctttgc cgccttccgg
     9841 agtgacagga ccgaagtgcc cgtggatctt aaggcgcggc atcctggcgc cgagccgctc
     9901 cttcaccatc gccattgcct ggaagaacgt atcaatacct ttgccggtca tcagcttgtg
     9961 accgccatag aagacaatgc cgtcccgcag agcgtctgga gcaggtggcg ggacgttggt
    10021 tccgtagagc atcacatgta ctttttccgg ctgcactccg agtttagtca gttgctggcg
    10081 caaatcttcg cagtggacca ataccgcgtc ggcaagattg taggtcaggt ttgtctcggg
    10141 ccgttcctgc tgatcaggat caagctcgtg cacggtgatc acgcgcgccg cgtcagacgg
    10201 ccgcttcagc cacgggaaga cggcttttga tccgtacgcg ttgagaatct gctgaaaatg
    10261 gacaacgtca gccccggcag aaagctccgc gtaacgtttg gcacgcgcgt agagaattac
    10321 gctgcgagct gcgccgcggg ccttgcgctt ccacggcgtt ttcgacctga agtcgaccag
    10381 gatgggcatg tcgaagtagc tgcagtcctt ggtctgaaag gcgcggctcg tctcaatggg
    10441 atcgccgcaa ccacaattgg aacctaccca ttgcactgtg ttgccaccca gtttctccag
    10501 ttccgcgcga agcgaatcag catatgcgcc ataagaggtc ttgaatgggc agcagataag
    10561 tgcgattttc atggttgcgt tctccttcgt tcttttgctc tcaagcaagg gcggtatatg
    10621 gcaggtgcaa gaatcgcgcc agatcgccac gctgcctcac gctgcgcgtc caggagtctg
    10681 gtcacgcttc cgttctttca tccgctcctt cattctgcgc cgcaattgcc ccagcggcga
    10741 aagaatcctc gtccttgatt catacgccag ccggcccagc acgccggggc ggaagatgta
    10801 gccattgaaa tgtggcagag tctcttcggt ccaggaggtc ttgtacctgt ctttggcacc
    10861 gccgaagaag aactccggta tctgccgttc agcgcactcc tgcaggattc cgttgaagag
    10921 cagctggccg ggaccaccgc gatggagtga ctcgtcatag gcgattttca ttggagcaaa
    10981 gcagtgctct gtttttacgc tgaacgcggc ggccgccacc gtgccgtttg tctcaagcgt
    11041 atgcaggcag aagtagcctc gtcgcgagcc ttcctgcgca atcgcgtcat aaaatcggcg
    11101 cgtgccggga tcgcaggcta tggctgaccc tcgttcccct ttccatcccg ccgcctctag
    11161 ttcgtaaaac ttactcaggc ggttcggatc gtcgtcaata tggcagacca aacgaggagt
    11221 gtgtcccgtt tcttcttcaa ggaggcgggc atatcggcgt aactcatgcc ggaagtggcg
    11281 gttggttcgc gcgaatggat cgagctttcc tgcatcattg ctgggcatgc ggagaatcgg
    11341 gctgtcctga aagaggtatg tgagcgtgtg atgcccttct gctgccgcca gctgaatcat
    11401 catgtcgcag ccgccacgct gcgggaagac gggcagcatc aggagctgcc atcctggcat
    11461 ccttttgagc tctgcccaca tgagtgagac tgcggtttcg agcgcgagtt ccggggccac
    11521 gacaagatcg aaccggacgg aatgggcgtt ccccgggccg gccagtttag ctaccggcac
    11581 acctgcgtac cagcctcgct gctgcagcaa cggcaacaca gccagcagct tctcaccgga
    11641 gctgattgtc agcaaagtga cttcggcctt aggctcgaaa gcctgcagat aagccctgat
    11701 ccactccggg cgatgaaatg gcgcagcagt agcacgatca caaagctcat tccacgcgtc
    11761 tgcatagcgg aaaagcaggt cttcgccgcc gttttctaat ttagctctca ggttcgggca
    11821 cacaaagcac agcctcatag cgcttctttt actgtctgaa gcatccggaa actcttttgc
    11881 tatgcacggc ggttgccaga gtagctgttt tgagaacggt acgttgtgcg ggctgcaggc
    11941 gcctgaaatg cttccaattg cggccaaaag gctgcatctt gtttgatcct atgatgcatc
    12001 tcgtctaagt ctcaggaagg cttatgcacc gttttgcatg atttgggata ccgctctggg
    12061 gcaaacttgc ggcagtcacg cggcggatgt gacaaagcgt tggagcgccg agagatgaat
    12121 aaatgtaggt tggacttata gtcaaacaaa agaggaccgc aggttctcgg tcctcttcgt
    12181 caagccgcgc cattgtgggg agcggcccta atcttgtctt tcgttctaat agatgcgatc
    12241 acctcaggcc gggttgcaga atcgaactgc agccgagccg cgtgaggcta tgaattagac
    12301 tggtctcggc gctaccggac aactttagcg atctctgcgg tttgagtggg cttcgggatc
    12361 ctttcgaatg aaaccaatca tcatcggaac ggccggtcat atcgatcacg gcaaaacgtc
    12421 actggtgaag gcgctcaccg gcattgacgc cgaccggctg gaagaagaaa agcggcgcgg
    12481 catcaccatt gacttagggt ttgctcatct tgaactcacg gcgccgagcg gcgaaaggct
    12541 gcggctcgga ttcattgatg tacccggcca tgaacgtttc gtgcggaaca tgctcgccgg
    12601 cgtgggaggc attgatcttg tcctgctggt tattgctgcg gacgaatcca tcaagccaca
    12661 gacacgcgag cacttcgaaa tctgccgatt gctctctgta ccacgcggaa tcacggtgat
    12721 cactaaagcc gatctggtgg atgaagacac tttgagtgtc gtgaaactcg aagtggagga
    12781 cttcgtacgc ggatcgttcc tcgacgcaag ccgctcgcca ataattgccg tgagcgcgct
    12841 taagggcgcc ggccttgacg aactgaagcg cgaaattgtc cgtttggccg ccgatatccc
    12901 cgcccgcgat acagaggcca tcctgcgcct gccggttgac cgcgctttcg tgatgaaggg
    12961 ctttggcacg gttgccacag gaactctgat cgctgggaaa gttaaaaaag aagacgaggt
    13021 tgagatcttc ccctcgggta agcgcgcgcg cgtgcgtggc ttgcaagtcc atggggcctc
    13081 cacagagcag gccattgccg gccagcgcac ggcggtgaac ctttcaggcg tgcaagtgga
    13141 agagcttggc cgtggcatga cccttgctcc actggaaacg ctaggcacca cccaacgcat
    13201 tgacgtgcag atttcgcttc tcaaagatgc caggccactc aggaaccgcg cgcgcgtgca
    13261 tctgcacgcg tttgcgtcag agaccatcgc tgaagtcacg ttgcatgagg gaggtgagct
    13321 caagcctgga aataccgccg tggcccagct tcgcactgaa gatcccatcg tggttcttcc
    13381 cggagatcga gccatcctgc gtcagttctc gcctgtgatc accattggtg gagcgctggt
    13441 gctcgatgct ttcccactac ctagacaaaa aaagcaagca cggctgagct tccttaagtc
    13501 acttataggt ggttcgcgtg aagaaagtgt gctggcgcgc gtcggccgtg ccggcaagaa
    13561 tggcagcagc atgcgcgcaa ctgtgcgcga aactgggttg aagtcttcat tgctgaagcc
    13621 gatgtttagc gcactggtgc agcagggccg gatcgtgcaa tcgggcgagc tatacattgc
    13681 acccgatgca ttcaaaacca cgcgagaagc tgcgctcttg gcgctcgatt ctttccataa
    13741 agccaatccg ctcgtcgccg gcatcagcaa ggaagaactg cgttcgaagc ttgacctgaa
    13801 tccgggagtg atggaaggac tcctggtaca gctcgtgcgt gacaagaaag tcgaagtcgc
    13861 cggcgagcag gtgcggcttt cgggccgagg cgtggagctg aaggacgaag aagccaaggc
    13921 caaggaacag atcgagaagg cctttgccgc cgcgggattg aaggtgccgc tgatgaaaga
    13981 agtgctcgca actgtcccgg tggataaagt ccgcgcccag aagctggtga cgctactgtt
    14041 gcgggaccgg gtgctggtga aactggccga tgaactcgtg tttcaccaca gtgcgctgca
    14101 tcagttgcgg gacatgattg ccggctataa aacgaggtca ctgaagatcg acgttggcgc
    14161 gttcaaggac ctgaccggtg tctcgcgcaa atacgccatt ccgctgcttg aatatcttga
    14221 tcgcgagcgg gtcacgcgcc gcgtgggcga cgagcgcgtc atcgtctgac ttctcgagca
    14281 gcaaaatcac ttggcctgca attttgcttt aagcgcaggc tctgccttgc acgcacctgc
    14341 aggcagctca gttccggcag gctcgttcag tagcggacag gcggaaacgc aaccttcgac
    14401 gcagccagcc gcacagttac cggctgagca cttatcctgg cagaactcag ggcaattctt
    14461 ggcgcggcga aagcgcccca tctcctggta gagcgccttt cgcgcccggt tcatcacgcc
    14521 tacgggccgg tgttccacca gagagtgcca gggattgtag gaaagcccct cacactgggt
    14581 gttccgctca gcggtgttca tatcaggatc gggcttgagc tcaaggctgg cgaccttgac
    14641 gaagggcgag tccgactcgc tccactccac cgtggtgtct tccacaggca tgttctttcc
    14701 cggcacctgg ggctgcacca tgaagtcaaa gcatgctccg ccggtagccg cctgcttcgc
    14761 caggtccaat cgcaaaaagt cgtagccata ctcacgcttg gccttcgcgt cgagcatggg
    14821 cttatttctg tcgcacggga ccatcttgta gtggacatac tggctgggtc ccagcgcata
    14881 tgctgatgcg ctccagtagg gctcggtcaa caggctctcc ggcggcttct tcttggtgtc
    14941 aaacagcagt ttcagttcgc gcagatgcca cctcagcggg ctcacgcgcg ggttgatgaa
    15001 gtaatgcaga gcatcgttat aggccagcat ctggttgaat tgcgcgtatt cttcgatcgt
    15061 ccggaagaaa aagatcgggt tgttcatcag caggaagtcc tgcgttgtat cgtcttcttc
    15121 tccgggcagc agcttcttgc cggggacgtt gaaaagcttg atggcgatgc cgcgagcgtc
    15181 cttctctgag tctggaaaca ctcccgggtt gccgctggaa aagcgcacca gcgcatcgta
    15241 ctcagcaggt ttggcaaaca cgccgaaagc aaactgcggc ggaacacggt cgaccttgaa
    15301 tgtcgccttt acgcagccgt gccctttggt atgaacgtcg cgctggtagt tgtgcgagcg
    15361 gaacccggga gcagttttgt cggtagtagg cggtggctcg tgcgcggcag tgttctggat
    15421 cagcttggta cggtcctgga tggacacatc gatcgcggag cgcacgatct ccgcggtgag
    15481 aaagtcttcg ttagcagtca cgtgctcgcc catgggagca tcggacggtc cgcgatcgtg
    15541 attgtagaga tagatcactg ccaaagcgag gagcagcacg attccaccaa gccatttgag
    15601 agccaggatc aatatcttct tcatggcagt tcgcacctcg tggatgaagg ccggcagcgc
    15661 ggtggcggcg gcggaatgta aaccgagcac gaatgatcgt tgggatcgtc gcggtggacc
    15721 ttcagatatt ccacaagcgc ccagcgctgg tgctcagtaa gttcaggtcc aatcacgccg
    15781 taggatggcg gtgatcccgg cgtccagggc tgataacctg cgcggaattc atgcccctgg
    15841 ttggaatttc cggtccgaga ggtatcgaaa aggaaggctc ctttttcgga tgcatcgctc
    15901 tgaaggccga cggcgtaggg atcgaagagc gtggtatggc gataaaactt cttgctgcgc
    15961 tcatacgcgg gcaccaacat ctggtagagc gtgggcacgg agccgttgtg caggaaaggt
    16021 ggagtcgccc agattcccgc gag
//
LOCUS       DASQYP010000053         6100 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_66605, whole genome shotgun sequence.
ACCESSION   DASQYP010000053 DASQYP010000000
VERSION     DASQYP010000053.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 6100)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6100)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6100
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_66605"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..409
                     /locus_tag="VE783_01440"
     CDS             <1..409
                     /locus_tag="VE783_01440"
                     /inference="COORDINATES: protein motif:HMM:NF013052.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="SET domain-containing protein-lysine
                     N-methyltransferase"
                     /protein_id="HYX52082.1"
                     /translation="TAPIKKGTKVLEYTGPRLSSEATDGMYSDNEVTYLFTMDDNKTV
                     IDGFGMAAFVNHSCSPNCESDQFGDRIWIVALRNIKAGEELTYDYCLWDGEVGDEAPC
                     YCGASNCRGTMYSEEEIERQKKLMAEQAAKKRA"
     gene            complement(443..862)
                     /locus_tag="VE783_01445"
     CDS             complement(443..862)
                     /locus_tag="VE783_01445"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52083.1"
                     /translation="MVLIPTGSRIEGEVADSDEGEAGRALSAMKDRGKLSLRFRDVLL
                     PTGASLPLSAHLVSLNSANGLSTKHIDDERRGSRSVTVGSQPGTGASFGPPLKGLAVG
                     NLSGGGYVIATRDKEKTFNLPAQTGMVIRLDQPATPR"
     gene            1014..1283
                     /locus_tag="VE783_01450"
     CDS             1014..1283
                     /locus_tag="VE783_01450"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52084.1"
                     /translation="MVPVILPALESAATPGPDEDELIPEAELAPVGAVEVALPALAGD
                     AVLPEDDVPAGVAFWLAEVEDCAFAAAATASNSGKRKSTAAFRII"
     gene            1451..1831
                     /locus_tag="VE783_01455"
     CDS             1451..1831
                     /locus_tag="VE783_01455"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HYX52085.1"
                     /translation="MTSVNGQPSKPRVLVVDDERVIADTLSIILNQNGFQASPVYTGT
                     AAVDMARETRPQLVISDVIMPDMNGIEAAIRIRQILPECKILLFSGQAATADLLENAR
                     AQGHEFEILAKPVHPQDLLAKLRL"
     gene            complement(1905..2504)
                     /gene="recR"
                     /locus_tag="VE783_01460"
     CDS             complement(1905..2504)
                     /gene="recR"
                     /locus_tag="VE783_01460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008301521.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="recombination mediator RecR"
                     /protein_id="HYX52086.1"
                     /translation="MARFAEPMAQLIDELKKLPGIGGKSAQRLAFHILRSSGEDAEAL
                     AGAIRNLKEKLHLCSVCSNITDVDPCSYCTNATRNQRLVCVVEEPTNIAAIEKTRSYN
                     GVYHVLHGAISPLQGIGPEQLRITSLMKRIDSGSVDELIIATNPTIEGEATAVHLTHL
                     IKPSGVKVTRIATGIPAGSDIEYADEVTMLKAMEGRREL"
     gene            complement(2513..2827)
                     /locus_tag="VE783_01465"
     CDS             complement(2513..2827)
                     /locus_tag="VE783_01465"
                     /inference="COORDINATES: protein motif:HMM:TIGR00103.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YbaB/EbfC family nucleoid-associated protein"
                     /protein_id="HYX52087.1"
                     /translation="MDGFNTRQFQEMLEQAQKQAQSLQQKMQQTTVEASAGGGSVTIK
                     MNGQKQVLETRIDPELVKSGDLEMLQDLVTAAVNAAGQKVDEAMQSTAAGMLNGLGIP
                     GM"
     gene            complement(2843..4669)
                     /gene="dnaX"
                     /locus_tag="VE783_01470"
     CDS             complement(2843..4669)
                     /gene="dnaX"
                     /locus_tag="VE783_01470"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: protein motif:HMM:NF004046.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009360 - DNA polymerase III complex
                     [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit gamma/tau"
                     /protein_id="HYX52088.1"
                     /translation="MAYQVLARKYRPQRFSDVIGQDHVTRTLKNAIEQQRIAHGYIFS
                     GHRGIGKTTIARILAMALNCRSSDRPTPEPCGVCDSCVEVRAGSAVDVIEIDAATNRG
                     IDEIRELREAARYRPARDRYKIYILDEAHQITDAAFNALLKTLEEPPSHVIFMLATTQ
                     AEDIPQTIRSRCQHFSFHAVKFDDIVKQLGDIAKQENIQADQEALAVLAEAGDGSMRD
                     ALSIMDQAIACCGTTVTAEGVRGLVGTVGSEILEQLIGTVARNSSEDALRLLDRLMTE
                     GQNPAFFARQLVRFLRNVLVAKVASSNSELLQVSSDERARAARVAEQFSEEDLARFLQ
                     IMLRTYDEIGYRQEQRFHLELGVLKLVHAQRLLPLEQVLSQVSSDAPRAAASRKPSGV
                     SATPVAAAPAPRRNETFTSPFEADRARKSRSFDPEMSTSPIAESVIQTTPAAVAVALE
                     EPPGESDRNGAAHVESQPEPVQQASGDPNVILGAVLSELENAGHKMLASTLEEGSIEL
                     RETELVISIAQSAAVVDLMMGPEPKRIANAAAGKAAGRPLKVKVMGGAAGQRNGNGAP
                     AARPVRNGAGARSRAAEDPMVRRMQEKFGAEIRTVIDHREKN"
     gene            complement(4741..5307)
                     /locus_tag="VE783_01475"
     CDS             complement(4741..5307)
                     /locus_tag="VE783_01475"
                     /inference="COORDINATES: protein motif:HMM:NF024273.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DinB family protein"
                     /protein_id="HYX52089.1"
                     /translation="MMMDAAALSREINDCRQRADDLLKDLTPGQFVQRPDPAKWSIAE
                     CIAHMSATAAVVRKIMRKGIARAREHNLRGQGPFAYGWRGHLLIWIAEPPPKFRIPAP
                     KSVAPALAIDHPHQIVPDFMKAQDDWENLLKEADGLDLSRITCGKLSSLFRCQMSGGL
                     MWMMAHQRRHLWQAENVKRQLMAKAATA"
     gene            complement(5381..>6100)
                     /gene="guaA"
                     /locus_tag="VE783_01480"
     CDS             complement(5381..>6100)
                     /gene="guaA"
                     /locus_tag="VE783_01480"
                     /EC_number="6.3.5.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003771338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003922 - GMP synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine-hydrolyzing GMP synthase"
                     /protein_id="HYX52090.1"
                     /translation="ATDLFLSKLACVTDPEKKRKIIGNTFIEVFEQESHRLEQKFRNV
                     EWLVQGTLYPDVIESRSVRGPSQTIKTHHNVGGLPEKMKLKLIEPLKDLFKDEVRRIG
                     RELGMPEEILQRQPFPGPGLAVRILGEVTPERIRLLQEADDIVVTEIRRAGLYTKIWQ
                     SFAVLLPVMSVGVMGDQRTYAYTCAIRAVHSEDGMTADWVPLPHEVLKTISNRIVNEV
                     RGINRVVYDITSKPPGTIEWE"
BASE COUNT         1220 a         1778 c         1747 g         1355 t
ORIGIN      
        1 cactgctccc atcaagaaag gcacaaaggt cctggaatac accggaccac gcctttccag
       61 cgaagcaact gatggaatgt actccgacaa cgaagtcacg tatctgttca cgatggacga
      121 caataagacc gtgatcgatg gattcggcat ggcggcattc gtcaatcact cgtgctcgcc
      181 caactgtgaa agcgatcagt ttggcgaccg aatatggatt gtggccctgc gcaacatcaa
      241 ggcaggagag gaactaacgt acgattactg cctttgggac ggcgaagtgg gcgacgaggc
      301 tccgtgctat tgtggcgcgt caaattgccg cggcaccatg tattcggaag aagaaattga
      361 gcgccagaag aagctgatgg cagaacaggc tgcgaagaag cgggcttgag gcactgcagt
      421 tcgcaagctt gcccgcggag ttctagcggg gagtggcagg ttggtcgagc ctgatcacca
      481 tgccggtttg cgccggaaga ttgaacgtct tttctttatc cctggtggcg atcacgtatc
      541 cgccgccgga gagattgccg accgcgagcc ctttcagcgg tggcccgaag gatgcgccgg
      601 taccaggctg ggaaccaacc gtcacgcttc tcgagcctcg gcgctcgtcg tcgatgtgct
      661 tcgtgctgag tccgttggcg ctgttgagcg ataccagatg cgcgctgagc ggcagactag
      721 cgccggtggg cagcaggaca tcgcgaaaac gaaggctcag tttgccacgg tctttcatgg
      781 cggacaaagc gcgaccggct tcaccctcat cggaatcggc gacttcgcct tcgatgcgtg
      841 agccggtggg aattagaacc atgccgttgg ctccgcgcac cggttgtgaa acggttgcag
      901 taaagcgatc tccagctttt gccgttttag tggagagggg cgtatcgagt gttgcctgga
      961 gcaaagtatt tggctccatt tgatctaggg cagaggcgtc cagcgggcgc gaggtggttc
     1021 cggtcatact tccagcgctg gaatcggccg ccactccagg gccagatgag gacgaactca
     1081 tacctgaagc ggaattggct cctgtgggtg ctgtcgaggt cgcgctgcct gcgctggccg
     1141 gcgatgctgt gctgccggag gatgatgtgc ccgctggcgt tgcgttctgg ctggctgagg
     1201 tggaggactg cgcattcgcg gcagccgcaa ccgcgagcaa cagcggaaaa agaaagagca
     1261 cggcagcttt ccgcatcatt taacacctca tccgtgagtt tgcataagct gagaagcatc
     1321 aataggatag gtaggttggc cgcgcgtcaa acttttccgc ttccagcggc atctctgtat
     1381 aagcggaatt gcgggctcag ataatttcat gagggcgtgc tgatttgagt ggatcaggag
     1441 taaacaaact ttgacgagcg ttaatggtca gccatccaag ccccgcgtcc tggtagtgga
     1501 tgacgaaagg gtcatcgcgg acaccctctc catcattctc aaccagaatg gattccaggc
     1561 ttctcccgtc tacactggca ctgcagcagt ggacatggcg cgggaaaccc gcccgcaact
     1621 tgtcatcagt gacgtgatca tgccggatat gaacggcatt gaagccgcta tccgtattcg
     1681 ccagatcctt cctgaatgta agatcctgct cttttcaggt caggccgcca cggcagatct
     1741 tttggagaac gcccgagcgc aaggccatga gtttgagatt ctggccaagc ctgttcaccc
     1801 tcaggatttg ctggcgaagc tgaggctata gccagctttc tcacagcgac agcaacgggt
     1861 gctggtgtgc gattccggcg ccgacgctcg atcgtggcga tcagttatag ctctcgtctt
     1921 ccttccatcg ccttcagcat cgtgacttcg tcagcatact caatgtcact gcctgcggga
     1981 attccggtgg cgatgcgcgt cactttgacg cctgagggct tgatcagatg cgtcaggtgt
     2041 acggccgtgg cttcgccttc aatagtggga ttcgtggcga tgatgagttc atccaccgaa
     2101 ccgctgtcaa tgcgcttcat cagtgaagta atccggagct gctccggacc gatgccctgc
     2161 agtggcgaaa tcgcgccgtg cagcacgtga taaacaccgt tgtacgagcg cgtcttctca
     2221 attgccgcaa tgttggttgg ctcctccacc acgcagacca gccgctggtt gcgagtggca
     2281 ttagtgcagt agctgcaggg atcaacatct gtaatgttgc tgcaaaccga gcaaaggtga
     2341 agcttttctt tcagattgcg aattgcgccg gccagcgctt cagcgtcttc accgctcgag
     2401 cgcaggatgt gaaacgccag ccgctgcgcg ctcttgccgc ctattccggg aagctttttc
     2461 aattcatcga tgagttgagc catcggctca gcgaatctgg ccacagccct ccttacatgc
     2521 ccggaatgcc cagaccgttg agcattcccg cagctgtgga ctgcatggcc tcatccactt
     2581 tctggccggc tgcatttacc gcggccgtca ccaggtcctg aagcatttct agatcgccgg
     2641 atttcaccag ttcaggatcg atacgcgtct caagcacctg tttttgcccg ttcatcttga
     2701 tggtcactga tccgccgcct gccgaagctt ccaccgtggt ttgctgcatt ttctgctgaa
     2761 ggctctgtgc ctgcttttgc gcctgctcca gcatttcctg aaattgacgt gtattgaagc
     2821 cgtccattgc tttacttctc tcctaattct tttctcggtg gtcaataacg gtgcgaatct
     2881 cggcgccaaa tttctcctgc atgcgcctga ccatcggatc ttccgcggcc cggctgcgtg
     2941 cccccgcgcc gttgcgcacc ggacgtgccg cgggcgcgcc atttccgttg cgctgccctg
     3001 ctgcgccgcc cattaccttg actttcagcg gacgtccagc cgccttccct gctgccgcgt
     3061 tggcaatgcg cttcggctcc ggtcccatca tcaagtcgac gacggcggca gactgcgcaa
     3121 tactgatgac cagctccgtc tcgcgaagtt cgatgctgcc ttcttcaagc gtggacgcca
     3181 gcatcttgtg gcccgcgttt tccaattcgc tcagcaccgc gcccaggatc acgttgggat
     3241 cgccagaagc ctgctgaacc ggctccggct gagattcaac atgagctgcg ccgttacgat
     3301 ctgattcgcc gggaggctct tccagggcaa ccgccacagc cgcaggcgtt gtctgaatca
     3361 cagattccgc tattggactg gtagacatct ccggatcgaa gctgcgggac ttgcgcgcac
     3421 gatcagcttc aaagggagat gtgaatgtct cattccgtcg cggagccggc gctgctgcaa
     3481 ccggggtagc tgatacgcct gagggcttcc ggctggctgc cgcacgcggc gcgtccgatg
     3541 aaacttggct taagacctgt tcgagcggca atagccgttg agcgtgcacc agcttcaaca
     3601 cgcccagttc cagatgaaac cgctgctcct gccgatagcc gatctcatcg taggtgcgca
     3661 gcatgatctg gagaaatcgc gctagatctt cttctgaaaa ttgctccgcc actcgcgcgg
     3721 cacgggcacg ctcgtcagac gaaacctgca acagctccga gttgctgctg gccactttag
     3781 ccacaagcac gttgcgaaga aagcggacca actgccgggc aaagaaggct gggttttgcc
     3841 cttccgtcat caagcggtcc agcagccgca aagcgtcctc gctggagttg cgggcgactg
     3901 tgccgatcag ttgttccaga atctctgaac ctacggtgcc caccagacca cgcacacctt
     3961 ccgccgtaac ggttgttccg cagcacgcga tggcctggtc catgatggag agcgcgtcac
     4021 gcatagagcc gtcgccggct tcggccagca cagccaacgc ttcctgatcg gcctgaatgt
     4081 tttcctgctt cgcgatatca ccgagttgtt tcacgatatc gtcaaacttc acggcatgaa
     4141 agctgaaatg ctggcagcgc gagcggatgg tctgcggaat gtcctccgct tgcgtggtcg
     4201 ccagcatgaa aataacgtgg ctgggcggct cttccagcgt tttaagcagc gcattgaacg
     4261 cggcatcagt gatctggtgc gcttcgtcaa ggatgtaaat cttgtagcga tcgcgggctg
     4321 ggcggtagcg cgcagcctca cgcagctcgc gaatttcatc gatgccgcgg ttcgtcgcgg
     4381 cgtctatttc gattacgtcc acggcactgc ccgcgcgaac ttcaacacac gaatcgcaga
     4441 cgccgcaggg ttcaggcgtg ggccggtcgc tggatcgaca gttgagcgcc atggcaagga
     4501 tgcgcgcgat ggttgttttg ccgattcccc gatgcccact gaaaatatag ccgtgcgcaa
     4561 tacgctgctg ctcaatggcg tttttcagcg ttcgggtgac gtggtcctgc ccaatcacgt
     4621 cagaaaagcg ctgcggccgg tatttgcggg ctaagacctg gtaagccatg gagtggacta
     4681 ctcaattata acgtctgcaa accggcgaga ttttcacagg ccagagttcc agaacaaagg
     4741 ctaagcggtt gccgccttcg ccatgagctg ccgcttcaca ttttctgcct gccacagatg
     4801 acgccgctgg tgagccatca tccacatgag cccgccgctc atctggcagc ggaacagaga
     4861 cgacagcttc ccgcaggtaa tgcgcgagag atcgagccca tcggcttctt tcagaaggtt
     4921 ctcccagtca tcctgcgctt tcatgaaatc aggaacgatc tggtgcggat gatcaatggc
     4981 gagcgcaggc gccacacttt tcggagcggg aatgcggaat ttgggtggcg gctccgcaat
     5041 ccagatcagg agatggcctc tccagccgta agcaaaaggt ccctggccgc gaagattgtg
     5101 ctcgcgagcc cgcgcaattc ccttccgcat gatcttccgc acaacagccg ctgtcgcact
     5161 catatgcgca atacactccg caatagacca cttcgcggga tcaggacgct ggacgaattg
     5221 gcccggggtg agatctttca gcagatcgtc agcccgttga cgacaatcgt tgatctcgcg
     5281 ggagagcgct gctgcgtcca tcatcatgag gtccctccgg gaatgacgct gcactgtatc
     5341 gcgcaaccgt tgcgatttca agaatacttt tccggcagcc ctattcccat tcaatcgtgc
     5401 ccggtggctt ggaagtaatg tcgtacacca cgcggttgat tccgcggact tcattcacga
     5461 tgcgattgga aatcgtcttc agcacttcat gcggaagcgg cacccagtcc gcggtcatac
     5521 catcttcgga atgcacggcg cggatcgcgc aagtgtacgc gtaagtccgc tggtcgccca
     5581 tgacgccgac tgacatgaca ggaagcagca cggcaaacga ttgccatatc tttgtataca
     5641 gccctgcgcg gcgtatttcc gtgaccacaa tgtcatcagc ttcctgcagc agccggatgc
     5701 gctcaggcgt cacctcgcca aggatgcgca ccgctagccc aggcccggga aatggctggc
     5761 gctggagaat ttcttccggc atgccgagct cgcggccaat gcggcggact tcatccttaa
     5821 aaaggtcttt gagcggctca atcagtttca gtttcatttt ctccggcagg ccgcccacgt
     5881 tgtggtgggt ttttatggtc tgcgacgggc cgcgcacgct gcgggactca atcacgtcag
     5941 ggtagagcgt accctgtacc agccattcaa cgttcctgaa cttctgttcg agccggtgag
     6001 attcttgttc gaacacttca atgaacgtgt tcccgatgat cttgcgtttc ttttccggat
     6061 cggtaacgca ggcgagcttg ctaaggaaaa ggtcagtggc
//
LOCUS       DASQYP010000054         6508 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_192348, whole genome shotgun sequence.
ACCESSION   DASQYP010000054 DASQYP010000000
VERSION     DASQYP010000054.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 6508)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6508)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6508
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_192348"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(245..640)
                     /locus_tag="VE783_01485"
     CDS             complement(245..640)
                     /locus_tag="VE783_01485"
                     /inference="COORDINATES: protein motif:HMM:NF019301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DoxX family protein"
                     /protein_id="HYX52091.1"
                     /translation="MIFDLTRFADIGFLLLRLMVAAIFGTSGWSHLKDPEGRSKSIGM
                     SKGFTVFLGAAELAGALGVAFGVLTQLAALGLILLMLGAIQKKMFVWHTGFWGKHGTD
                     GWHYDLMMIIMNLVIVLTGGGAYVLWPRA"
     gene            complement(705..1856)
                     /locus_tag="VE783_01490"
     CDS             complement(705..1856)
                     /locus_tag="VE783_01490"
                     /EC_number="6.5.1.1"
                     /inference="COORDINATES: protein motif:HMM:NF006078.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003910 - DNA ligase (ATP) activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA ligase"
                     /protein_id="HYX52092.1"
                     /translation="MARPSHANKKKAADVSAGAVPAEDLGQAFPAIDLPITPPYPPAE
                     ARAVDEIPHEHGWLYEPKWDGFRCLAFRSGDEIVLQSKAGQPLGRYFPEMVEALRNLP
                     AQKFVLDGEIIIRSGNGLDFDALLQRIHPAASRIKKLSQETPATYLVFDLLVTEKGRS
                     IADQPLSARRMELQHFAAPNFQGNPQVHLSPAASDFETAERWMRQGAAHGLDGIVAKR
                     LDCEYTSGERTGMVKIKRMRTADCVVGGFRWAQKGGEVGSLLLGVYNHEGQLDHIGFS
                     SSFSKEDRKKLKPIITPLIAKESGVDAGFNGKAPGGPSRWAREDRNTEWFPLKHKLVG
                     EFQYDHFSGGRFRHGTKFLRWRPDKKPEQCSIDQVKPGRSRDGWKVFGL"
     gene            1992..2585
                     /locus_tag="VE783_01495"
     CDS             1992..2585
                     /locus_tag="VE783_01495"
                     /inference="COORDINATES: protein motif:HMM:NF024834.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HYX52093.1"
                     /translation="MKTFIFGLIIGLLIPAIVGYCYFRYGYAPVATASAPMPFEKTMA
                     RMALRARISKEAPKNVPLQPTEQNLTEGAKIYVQNCAFCHGWPNQPATVAAKGMFPLP
                     PQLFSKDEMVTDDPVGVTWWKVKNGIRMTGMPGFGEMVPDNQIWQVSLLLHEADKLPA
                     SAQNALTRMSPMPPAQTENNTPAPEKSPAPPAQGKKK"
     gene            complement(2672..2851)
                     /locus_tag="VE783_01500"
     CDS             complement(2672..2851)
                     /locus_tag="VE783_01500"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52094.1"
                     /translation="MAKIAKTADRKKMMDTSKSTDCPKCGKPTRIVKRVKDRERNVPG
                     GIFISCSGCDFYEKL"
     gene            3122..3469
                     /locus_tag="VE783_01505"
     CDS             3122..3469
                     /locus_tag="VE783_01505"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52095.1"
                     /translation="MKRFVLVLFAFFAIGAFAADSTVSGYLVDLACAAEDGQKADFGL
                     KHKKSCLEMDECAKSGYGVLTSDKKVVKFDKAGNEQAKKFIADLKKGSDIKVNVTGSV
                     NGDTMSVSKIALQ"
     gene            complement(3539..3913)
                     /locus_tag="VE783_01510"
     CDS             complement(3539..3913)
                     /locus_tag="VE783_01510"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52096.1"
                     /translation="MCSQGNLQERRKNTVMIVSLDRPLGDRRKQALEKAGIPAFVVYE
                     VEGVSSACNQHHPRAVVFGRSLPPAEKRRAWLQVRNACHVPIIELFEHDVPEEMPAAY
                     LHQLATPDDFVDTVKKLLKRRR"
     gene            complement(4043..4318)
                     /locus_tag="VE783_01515"
     CDS             complement(4043..4318)
                     /locus_tag="VE783_01515"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52097.1"
                     /translation="MSPKRLLSSADLKKVHNAAATRPLTIEEIRLVADLRVMHAKIDE
                     LYQVVTNLKRRHGEESVRIYSDRKVLEENIHRVDEIYLWFVSLKERR"
     gene            4534..4884
                     /locus_tag="VE783_01520"
     CDS             4534..4884
                     /locus_tag="VE783_01520"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52098.1"
                     /translation="MPRPTVLVAEPEPAQALSVRKLVLETAKFNVLTAHSTREATELF
                     RLFPNSNAVVVAPGDGIHCETIVGHIKSLTKKVPVIGIRCEDGDYTVPSYEPEELLHL
                     LRDLLGDPRTLDGK"
     gene            complement(4886..5185)
                     /locus_tag="VE783_01525"
     CDS             complement(4886..5185)
                     /locus_tag="VE783_01525"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52099.1"
                     /translation="MAENKKKATKKVIARRSAAESQVRLVTSRTLVPEEKVDRVIVPE
                     PVISVVQEKTYITTEPEVEIRRPATLAQALTEPKVAVVKPKTKVKKVRTRTRRAA"
     gene            5738..6163
                     /locus_tag="VE783_01530"
     CDS             5738..6163
                     /locus_tag="VE783_01530"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52100.1"
                     /translation="MNDEVDAALWNDLIRIVPAGHRVHLGTFRVAGIRFQHTIRVSHP
                     LMGMWLNLFAHLRPENETLYSAHACAGKEDADAGGMQSRPPERWPTLHSALRQAGLEE
                     QVIGELKEWLDRDPVRPVQVEITTHQASLLGLDIGDTIQ"
BASE COUNT         1361 a         1871 c         1850 g         1426 t
ORIGIN      
        1 cttcgtaatt ccgaaatccc tgctcagcca ttagtggttc tccctgatcc tcagacagaa
       61 atcatttcga tgcgggccgg gcggcggagc cggtggatca aagatgctga cgacctgctg
      121 aatatccaca cgctcggctt ccgaggcgag gcgctgccct cgatcggttc cgtagcgcgc
      181 ccggcggcgc gtagctcacg cgcaggattc tactatgtag ctgctttccg gcggcggaag
      241 gcgatcacgc tcgcggccac agaacataag ctcctccgcc ggtcagcaca atgaccaagt
      301 tcattatgat catcatcagg tcgtagtgcc agccgtcggt accgtgcttg ccccagaagc
      361 cggtgtgcca cacaaacatc ttcttctgga tggcgccgag catcagcagg atcagcccga
      421 gtgcagccag ttgcgtcagt acgccaaaag ctactcccag cgctccagcg agttccgcgg
      481 cgccaagaaa taccgtgaag cccttgctca tgccgatgct tttgctgcgt ccttcaggat
      541 ctttcagatg gctccatccg ctcgtgccaa aaattgcggc caccatcagg cgaagcagga
      601 gaaatccaat atcggcgaat cgcgtgaggt cgaaaatcat gcgcacctcg ctggaggttg
      661 agaaacgagg ggcccgaaga gcgattcagt ttagcaaggc agttctataa gccaaagact
      721 ttccatccat cgcgcgacct gcccggcttg acctgatcaa tgctgcactg ctccggcttc
      781 ttatctggac gccagcgcag aaacttcgtg ccgtggcgga agcggccacc ggagaagtgg
      841 tcatattgga attcgcccac cagcttgtgc ttaagaggga accattcggt attgcgatct
      901 tcgcgcgccc agcggctggg accgccggga gccttgccgt tgaagcccgc gtccactccg
      961 ctttctttgg cgattagtgg cgtaatgatg ggcttcaact tcttccggtc ttccttgctg
     1021 aagctggaac tgaagccaat gtggtcgagc tgcccttcat ggttgtagac gccgagcagc
     1081 agtgagccca cttccccgcc cttctgcgcc cagcggaatc cgccgacaac gcagtcagcc
     1141 gtgcgcatgc gcttgatctt gaccatcccg gtgcgctcgc cggaggtgta ttcgcaatcg
     1201 agccgttttg ccacgatgcc gtcgaggccg tgggccgctc cctgtcgcat ccagcgctcg
     1261 gcggtttcga agtcggaggc cgccggcgaa agatggacct gcggattgcc ctgaaaatta
     1321 ggagcagcaa agtgctgcag ctccatgcgt cgcgccgaga gcggctgatc ggcaatcgac
     1381 ctgccttttt cggtgaccaa caaatcaaag accagatacg tagcaggcgt ttcctgcgaa
     1441 agctttttga tcctgctggc cgcggggtga atgcgttgca gtagcgcgtc aaagtccagg
     1501 ccattgccgg agcggatgat gatctcgccg tctagaacaa acttttgcgc gggcaggttc
     1561 ctgagcgcct ccaccatctc cggaaagtaa cgcccgagcg gctggccggc tttggattgg
     1621 agcacaattt catctccgga gcgaaaagcc agacagcgga atccgtccca cttgggctcg
     1681 taaagccagc cgtgctcatg gggaatttcg tccacggcac gcgcctctgc gggcgggtat
     1741 ggaggagtga tgggcaggtc aatcgcagga aacgcctgtc ctagatcttc cgccgggact
     1801 gctcccgcgc taacatcagc tgctttcttt ttgttcgcat gacttggccg ggccatacac
     1861 attgagatgc cggggagaag ccggccgtct attccctaaa tactgcgcag cactggttgt
     1921 aaattctggt tcggattggg acacatcccg ttcccaggcc ttagaatctt ccaccgagga
     1981 gattaagcac tgtgaagaca ttcatcttcg gcctgatcat cggcctgctg attcctgcca
     2041 tcgttggtta ttgctatttc cgatatgggt atgcgccggt ggcaacggct tccgcgccca
     2101 tgccgtttga aaaaaccatg gcgcgcatgg cgctgcgcgc gcgcatcagc aaagaagcgc
     2161 ccaaaaacgt tccgctgcag cctacggagc agaacctgac ggaaggcgcc aagatttatg
     2221 tgcagaattg cgcgttctgc cacggctggc ccaaccagcc cgctaccgtc gctgcaaaag
     2281 ggatgttccc gctgccgccg cagcttttca gcaaggatga aatggtgacc gatgatcctg
     2341 tgggagtgac atggtggaag gtgaagaacg gcattcgtat gaccggcatg ccgggtttcg
     2401 gtgagatggt gcctgataac cagatttggc aggtcagcct gctgctgcat gaagcggaca
     2461 aactgccggc atccgcgcag aacgcactga ccaggatgtc gcccatgcct cccgcccaga
     2521 ccgagaacaa cactccggct ccggaaaaga gtcctgctcc gcctgcgcaa gggaagaaaa
     2581 agtaagaaga gaaccagcag atttacggtt ctcaaataca aaaagctgcc gcgatctgtg
     2641 tcgcggcagc tttactcttt ccaggctctc tttacagctt ctcgtagaag tcgcagccgg
     2701 agcaggaaat gaagataccg ccgggcacgt tgcgctcacg gtctttcacc cgcttcacaa
     2761 tgcgggtggg cttgccgcac ttagggcaat ccgtgctctt ggaggtatcc atcatctttt
     2821 tgcggtcggc cgtcttggca atcttagcca tgtctcaaaa ttctcctgtt tcagtggttc
     2881 ccgtgtggct ggcgagccgc cgggcattgc ggtgtggaaa ttccaggggc agaaaaccga
     2941 ttgagctttg cttgccgtac cgctctctta ttctacaacg ccggtcattt cctgtctttt
     3001 gcgggccgcg ccaggccagc acaccattga gcaattcccg gttttgagga aatcatgtaa
     3061 cctaatgcca agttttcaat ctgtacagag ttgatttcga tccaaccgcg aggggaaatt
     3121 catgaaacgt ttcgtactgg tcctgttcgc cttttttgcc attggcgcgt tcgctgctga
     3181 tagcacagtc agcggctacc tggttgatct ggcctgcgcc gcggaagacg ggcagaaagc
     3241 cgatttcggc ctgaagcata agaagagctg cctggagatg gatgaatgcg ccaagagcgg
     3301 ctatggcgta ctcaccagcg acaaaaaggt ggtgaagttc gataaggccg gcaacgagca
     3361 ggccaagaag tttatcgccg acctgaaaaa aggctccgac atcaaggtca acgtcaccgg
     3421 ctcagtgaat ggtgacacca tgagcgtgag caagatcgcc ctgcaataac gaaagacatt
     3481 tcgtgcgacg agagctgccg tggcttaggg cttcggcagc tttagttttt gccgcgactt
     3541 atctccgacg tttcagcagt tttttcaccg tatccacaaa atcgtcgggc gtagccagtt
     3601 gatgcagata ggctgcgggc atttcttccg gcacgtcgtg ctcgaaaagt tcaatgatgg
     3661 gaacgtggca ggcattgcgc acctggagcc atgcccgccg tttctccgcc ggcggcaggg
     3721 accgtccaaa taccacggcg cggggatggt gctggttgca cgcggagctg acgccttcca
     3781 cttcatacac cacaaatgca ggaatgccgg ctttttccag cgcctgcttt cgcctatcgc
     3841 cgagtggccg gtccagagac acgatcatca ccgtgttctt ccggcgctcc tgaaggttgc
     3901 cctggctgca cattgacgcc aatcccgctc actggcctta gatgctgaaa aaaataaagc
     3961 gtgcattcct gcgccggcaa tcaagcaggg gattaaagag aatttaagat gtgtttgtga
     4021 ggccaaacgc cgagcggcgt gactatcgcc gctctttgag tgaaacgaac cagagataaa
     4081 tctcgtcgac gcggtggatg ttctcttcca gcaccttgcg atcagagtag atacggaccg
     4141 actcctctcc atgccggcgc ttcaggttag tgaccacttg atacagttcg tcaatttttg
     4201 cgtgcatgac acgtaaatct gcgaccagcc ggatttcttc aatggtgaga gggcgggtag
     4261 cggcggcatt atggactttc ttcagatcag cggatgagag cagccgtttg ggagacacct
     4321 caagtttcct ctccggtcag agttgctgcg cagcagccga ggaaccccgc gttccaggtg
     4381 cgccatttcg cgcaatacat tctaagttgg tcagagacgt tgcgaggttg caagtaaagg
     4441 caacccttca tcttttttgc cgcaacccag aactaagggg cccgatttta gcgctgcaac
     4501 ctgtatcgcg ccgcgactca tccactggga agtatgccca gaccaacggt gcttgtcgca
     4561 gaacccgagc ccgcccaggc gctttctgtg aggaagctgg tgctggaaac cgccaagttc
     4621 aacgtgctca cggcccacag caccagagaa gctacggaac tcttccgact gttccctaat
     4681 agcaatgcgg tagtggtcgc gcccggagat ggcatccact gcgaaacgat cgtgggacac
     4741 ataaaatcac tcaccaagaa agttcctgtg atcggcattc gctgcgaaga cggcgactac
     4801 actgtcccga gttacgaacc agaggagctg ctgcatctgc tccgcgacct gctgggcgac
     4861 cccagaacgc tggacggcaa atagctcacg cggcccggcg cgttctggtc ctgaccttct
     4921 tcaccttagt cttaggtttc accacggcga ccttcggttc agtcagggcc tgcgccaggg
     4981 ttgccggcct ccggatctcc acctccggct ctgtggtgat gtaggtcttc tcctggacga
     5041 cgctgatcac aggctccggg acaattacgc ggtcgacctt ttcctctgga accagagttc
     5101 gcgaggtcac cagccgcact tgcgattccg ctgcacttct cctggcaatc accttctttg
     5161 tggctttctt cttgttctct gccatgtgtg gtccccctga agatgagagc gatggttact
     5221 tcaggcggtt gcactcaatg gcaagcagaa cccgaaatcc gagccgcagg gtgccttaaa
     5281 gtctctaatg ccgagccaac accgttttaa tgaaggccct gcaagatggg tgcagttcgc
     5341 gctcaaggca aggcgaattc cattacggct tcttgaggca gccggggtgg ggcgtgccct
     5401 caatcctttc cgggatctgt gcgtagatga gggacggagc gcagcgcgtg ggcgtgaact
     5461 acagagccgg gatctgtgcc gagaacccgg ccgtgtaatt gcagcaggca gctcgaacct
     5521 tgatagaaag tgtgctctcc tcactgaggc ccgctcgtcc cgtcagcggg cctcgtcttc
     5581 ttcttcccgc agttcaagct gatacagatg gatgtggtca tggcctacat ccgacacttc
     5641 cagcaacaac tcatttcacc gcgtcactgc actgcgagca gcgggggaaa cggtctccgg
     5701 agaaaagcct gaccgtgcga atcagccggt gccgctcgtg aacgacgaag tagacgccgc
     5761 tttgtggaat gatctcatcc gtattgtgcc tgcgggacat cgtgttcacc tggggacctt
     5821 tcgcgtagct gggattcggt tccaacacac aatccgggta tcgcatccgt taatgggtat
     5881 gtggctcaac ctttttgcgc atctgcgtcc cgagaacgaa acgctgtatt ctgcccatgc
     5941 ctgtgccgga aaagaagatg ctgacgccgg cggaatgcag tcgcgtccgc cggaacgctg
     6001 gcctacactg cacagcgcgc tccgccaggc tgggttggaa gaacaggtga tcggcgaact
     6061 gaaagagtgg cttgaccggg acccggtgcg gccggtgcag gtggagatca ccacgcacca
     6121 ggcgagcctg ctcggattgg acatcgggga tacgattcag tagcaaacgg tgtaatggta
     6181 aaccatcgag attaaataca agctgagaag tccacaagtt cccctgtgtg cctggcgcat
     6241 caggacactt atcgcggaag ctgccggcat ctgctcactt gagtggctga gccatgtcgc
     6301 atcttttcgt gttgattgtt gtattccttt tgcttccttg atcctgtcgc atctttaatc
     6361 ctgtaatcct gtcgcatgtt ggcgtttgcg gaccctgccg ggggcgggca aaatcggctg
     6421 gcggctcgtc ccagcgatca gaccataaca acttgccccg atccgggagt atcgagcgcc
     6481 ggcgggggct tactcgtgcc ttggctgg
//
LOCUS       DASQYP010000055        14510 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_214866, whole genome shotgun sequence.
ACCESSION   DASQYP010000055 DASQYP010000000
VERSION     DASQYP010000055.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 14510)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14510)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14510
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_214866"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2522
                     /locus_tag="VE783_01535"
     CDS             <1..2522
                     /locus_tag="VE783_01535"
                     /inference="COORDINATES: protein motif:HMM:NF037085.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="MBG domain-containing protein"
                     /protein_id="HYX52101.1"
                     /translation="VGTYAIVATLSDNGTGALANYTVTVNNGTLTVNPAPLTVVANNA
                     TMIYGDPLPSFTGTVTGIKNGENITASYSTTATSASSVGTYSIVPSVSDNGTGVLSNY
                     AVTLTNGTLTINPAPLTVTAANATMIYGDPLPSFTGTISGIKNSDNITASYSTTATSA
                     SPVGTYSIVPAASDNNTGKLTNYTVTLVNGTLTINQAPLTVTAANASMTFGDAVPALT
                     GTITGIKNGDAITASYSTTASSSSPVGNYPIVPTASDGGTGKLANYAITVVNGTLTIS
                     PAPLTVTAASATMIYGDPIPALSGTITGIKNGNNITASYSTVATSASPVGAYPIVPTV
                     SDNGTGALANYTVTLVNSTLTIGQAPLTVTGANATRVYGDPNPAFSGTVTGIKNGDNI
                     TATFASATDPTTTVGNYPIVGTASDNGTGTLANYKVTLVNGTLSITPAPLSATANNAT
                     RVYGDPNPAFTGTITGLKNGDNITFGATSADPTVAVGTYPIVPALVDPTGKLVNYTVT
                     ATNGTLTVTPAPLTVTAANASMLFGDPVPTLTGSVSGIKNGDNITGIYTTTASSTSPV
                     GAYPITASASDNGTGKLSNYTVSLGNGTLTVNPAPLTVTASNSSMIYGDPVPAVTGTL
                     TGVKNGNNITAGFSVAVTSASPVGTYAILAAVSDNGTGALANYSVTINNGVLLVAPAP
                     LSVTAANGSRLYGDPNPVFTGTIVGIKNNDNITAAFSSATDPTTTVGNYPIVPSASDN
                     GTGALANYTVTLNNGTLTINQAPLTIQANDATGTAGQPIPALSGTITGIKNNDTITAS
                     YSTTADQTSPAGTYPITPSADPNPLLVNYSITLINGTLTLQ"
     gene            2945..4627
                     /locus_tag="VE783_01540"
     CDS             2945..4627
                     /locus_tag="VE783_01540"
                     /EC_number="6.3.4.2"
                     /inference="COORDINATES: protein motif:HMM:NF003792.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003883 - CTP synthase activity [Evidence
                     IEA];
                     GO_process: GO:0006221 - pyrimidine nucleotide
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0006241 - CTP biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CTP synthase"
                     /protein_id="HYX52102.1"
                     /translation="MAAKYIFVTGGVVSSLGKGLAAASIGSLLESRGLKVNLMKFDPY
                     LNVDPGTMSPFQHGEVFVTDDGAETDLDLGHYERFTHAKLSRDNNWTTGRIYEQIITK
                     ERRGDYLGKTVQVIPHVTNEIKAAMKKVAQEVDIAIVEIGGTVGDIESLPFLEAIRQM
                     RQELGRDNTLFVHVTLVPWIGAAGELKTKPTQHSVKELLSIGIQPDILLCRTDRFLSK
                     DLKGKIALFCNVEDEAVITAKDVASIYECPLVFHREGVDRLLLRYLRIDSREPDLTRW
                     EELVHKIYNPKDEVHIGIVGKYVEYEDSYKSLKEALVHAATAQNLKLTVTWVEAEGLE
                     HKDAANRDFEIQLEGFDGILVPGGFGKRGIEGMLNAIRYAREKKVPYFGICLGMQTAC
                     IEYARNVCGLDDANSSEFDPATAHRVIYKLRELRGIDELGGTMRLGAWTCKLEPNSNA
                     SEAYKSVEISERHRHRYEFNREYEAILTGAGLRITGATPDGTYVEIVEIPGHPYFLGC
                     QFHPEFKSKPLEPHPLFLSFVKASYANSMARREAKQNEDVEMFLRPERIVRR"
     gene            4639..5469
                     /gene="kdsA"
                     /locus_tag="VE783_01545"
     CDS             4639..5469
                     /gene="kdsA"
                     /locus_tag="VE783_01545"
                     /EC_number="2.5.1.55"
                     /inference="COORDINATES: protein motif:HMM:NF003543.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008676 - 3-deoxy-8-phosphooctulonate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-8-phosphooctulonate synthase"
                     /protein_id="HYX52103.1"
                     /translation="MEQANAFNLDGFTVGGHALFLIAGPCVIESEEHVLKMAEAIKAV
                     TKKLGMPYIFKASYDKANRTSVRSFRGPGIVEGLRTLRKVKEQTGLPVLTDVHEAKDV
                     PAVAEAVDVVQIPAFLCRQTDLLVQAGRHAKSVNIKKGQFVSPWDMRHAVEKVRDAGG
                     KNVFLTERGSSFGYNNLVVDMRSLAIMREFTPVVFDATHSVQLPSAGGKGEAVSGGQP
                     QFIPLLSRAAVAAGVDGIFMEVHDNPAEAKSDGANALDLKLLESVLRELLAVRKAVSG
                     "
     gene            complement(5554..6579)
                     /locus_tag="VE783_01550"
     CDS             complement(5554..6579)
                     /locus_tag="VE783_01550"
                     /inference="COORDINATES: protein motif:HMM:NF014667.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SCO family protein"
                     /protein_id="HYX52104.1"
                     /translation="MKSKLMALALAVLGIGLGIFQGVRSSALDNSKWGANYFPNIELT
                     TQDGKKVKLYDDLLKGKIVAVNMIYTRCVDSCPLETARLAQVQRYLGDRMGKDIFFYS
                     ITLDPKHDTPEVLKDYAEKYHAGPGWLFLTGKKDDIDQVSKKLGLYSDPDPNNRDGHT
                     PGLLVGNETTGQWMRNSATDNPRFLATMLSDFMDPHKDRTKETRASYEQAKPMNFDKG
                     EYFFRTRCGACHTVGQGDKIGPDLIGVTSVRENAWLTRFIMMPDKMLQEKDPVATALF
                     KQYKEVLMPNLRMGDQDTAAILDYLARVTAARDKAVKDPAATTPEPAASHQEKMPSPG
                     GSAPQQY"
     gene            complement(6691..8910)
                     /locus_tag="VE783_01555"
     CDS             complement(6691..8910)
                     /locus_tag="VE783_01555"
                     /inference="COORDINATES: protein motif:HMM:NF019351.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005507 - copper ion binding [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="multicopper oxidase domain-containing protein"
                     /protein_id="HYX52105.1"
                     /translation="MSIFYLPKDASKARLKEAENARKNRAEILKAYSQGQVSRRDLIK
                     WGLFTSAGALAPIHGLNPFVASSEASIPTGLNPSPLFGVQPFSTPMPRFDLIQRGNNP
                     LGGDLTPVPQAAANQTQQAVDPVLGGGTGPIEGRPPGDIWAHQRFNQFLPQVSVEMSQ
                     AQAQTNTVYNPGVASNMNSGIDPTAAIPLKFHPQLPTQQPNAVWTFNGTIPPKLVQGR
                     YGEPILFRHHNKLPADVAANNGFGRHTISTHEHNGHHGAENDGFTGAYFFPGQFYDYH
                     WPIVLAGHFTINTAATDPRAGSPADNGGINKVPGDWRETMSTHWFHDHMFTFTSQNVY
                     KGNAAMFNIYSSLDRGNEAINDGVNLRLPSGTAKSWGNLEYDVNLMLAEKAFDANGQL
                     FMDIFDFDGFIGDVMTVNLTYKPFFEVERRKYRFRILNASVSRFFKYGLSDGSPMIQI
                     ANDGNLLPSPVVQTQSDEQGIAERYDWVIDFSRYSIGSKVWLVNMCEHQDGKKPAKDL
                     TLAQALSGGSGDPCVGKFLEFRIVRDPAQPDQSQVPNVMIPNPDLSSIPVSRQRTFVF
                     GSGASQPQNDPVTSFILGAGNKPGPWGVGVDGGKTLNADFGRISAAPSFGTREVWTLV
                     NGGGGWDHPIHIHFEEGQILARNGSASNVPAWEKGRKDVYRLRPGGSVTLTMQFRDWG
                     GMFMEHCHNTVHEDNAMLVRWEIDNGGAPFLRPLPTPIPTAQGVTFEAPDDIAPTAF"
     gene            9331..10179
                     /locus_tag="VE783_01560"
     CDS             9331..10179
                     /locus_tag="VE783_01560"
                     /inference="COORDINATES: protein motif:HMM:NF013594.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc metalloprotease HtpX"
                     /protein_id="HYX52106.1"
                     /translation="MNGLKTTFLLTAMTVLAVLVGDYFGGRNGLVFAFVLAAIMNFVS
                     YFFSDKIALAMYRAQPVTREQLPRVYAVVERLAAKIGIPTPKIYVIPTDSPNAFATGR
                     NPNHASVAVTEGILNLMDDEELEGVLAHELGHVRNRDILTSSIAATIAGSITMLARLG
                     FWFGGALGGDDRDRRGGGAGALLMLILAPIAATLIQLAVSRTREYEADASGAHYTGNP
                     YALARALQKLDAYSKRIPMVATPSTAHLFIVQPLLGMNFGNLFSTHPPIHKRIERLTG
                     RPEQFQ"
     gene            10346..11245
                     /locus_tag="VE783_01565"
     CDS             10346..11245
                     /locus_tag="VE783_01565"
                     /inference="COORDINATES: protein motif:HMM:NF019127.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1259 domain-containing protein"
                     /protein_id="HYX52107.1"
                     /translation="MKTMLSLAVLVLAISSANSQSQKSTKSATDWKAVDDAMGRAGQD
                     QPDGTHKFSMARGDLKVTVDDVQVKPGFALGSWAAFHKIAKGSEVMGDLVLAEDEVAP
                     VMDKLQAAGLEITALHNHLLHETPRVMYMHIHGNGDAVKLASGIKDALSATKTPPPST
                     PPAQPPDLGFDTKQIDSILGHLGKNNNGVYQVAVPRAEKITENAMVVPNSMGLATALN
                     FQPTGGGKAATTGDFVLIGKEVNPVIKALRAGGVQVTALHSHMLGEQPRLFFMHFWGN
                     DDALKLARTLRTALDQTNSVKAK"
     gene            complement(11315..12022)
                     /locus_tag="VE783_01570"
     CDS             complement(11315..12022)
                     /locus_tag="VE783_01570"
                     /inference="COORDINATES: protein motif:HMM:NF017532.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phytanoyl-CoA dioxygenase family protein"
                     /protein_id="HYX52108.1"
                     /translation="MSTTSAIEQSWTAQLHERGYAIVPEVVSASEVMVLLVAMADLVS
                     RRGRAAVRHVLNHPSVNVIANDRRLLAMAQEVLGPEAFPFRATLFDKSPESNWLVTWH
                     QDTALPLRAKMNLPGWGPWSVKDGVTYAHAPAFALNQVLALRLHLDASTERNGPLKVL
                     PATHRMGVLTEDEIARCAAEREPVECLAGKGGIVAMRPLVVHASSKSAAEMPRRLLHI
                     EYAITKEFSGGLELAIT"
     gene            complement(12139..12915)
                     /locus_tag="VE783_01575"
     CDS             complement(12139..12915)
                     /locus_tag="VE783_01575"
                     /inference="COORDINATES: protein motif:HMM:NF015338.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease/exonuclease/phosphatase family
                     protein"
                     /protein_id="HYX52109.1"
                     /translation="MRGRRAVGMKGRMVKGTPSFRIATYNTHKCRGMDGRIRPHRVAQ
                     VLQELDADIIALQEIMSLAGGRREQNQAQYLADAVGLDYRMGETRKYRGAAYGNVLLT
                     RFPIKDVEAYDLTASRREARGCLRLDLEVAPGKIVHVFNIHLGTGYLERRKQAKLLVS
                     RQVLLSPKLKHPRLILGDFNEWTRGLVSRMLAQRFESVDIQFHLNRRKTYPGVLPIMH
                     LDHMYFDRQLALEEFVLHRSRMALMASDHLPLVAYFRLDK"
     gene            12953..13855
                     /gene="pgeF"
                     /locus_tag="VE783_01580"
     CDS             12953..13855
                     /gene="pgeF"
                     /locus_tag="VE783_01580"
                     /inference="COORDINATES: protein motif:HMM:NF014619.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan editing factor PgeF"
                     /protein_id="HYX52110.1"
                     /translation="MTTSTQRRTARPAPLKNKPTILQVPALRKLPWLVHGFSTRPGGS
                     STAYGGKSLNLGFTAHDERAHVEHNRALLLGNIGAGTAKRPWPIATVRQIHSDLIHMV
                     RSPEPKRPAGDGMVTNVPEIVLAVLTADCFPVLLVDKKNRAVGAFHAGWRGTVQRIAV
                     KGLGIMRHEYGTEPRHVLAVIGPGIQKCCYEVDEEVRAKFESQFAFTDKLFHYTRDSD
                     PVREKYPLLFMNMRAPGHGDLCEKLHLDLHLANRLQLEEAGVPAKQIATISECTACDT
                     RRFFSHRGEKGHTGRMMAAIGIKK"
     gene            complement(13862..14191)
                     /locus_tag="VE783_01585"
     CDS             complement(13862..14191)
                     /locus_tag="VE783_01585"
                     /inference="COORDINATES: protein motif:HMM:NF037081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0030261 - chromosome condensation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HU family DNA-binding protein"
                     /protein_id="HYX52111.1"
                     /translation="MTKADLIEEVSRLAELTRKDSEIIVETIFDSVVRSLRAGDKIEI
                     RGFGSFRTRQRKPRVGRNPKTGARVEVPAKKIPYFKPSKELKDVINHGEAAPAASTAA
                     AEPPPQQ"
     gene            complement(14281..>14510)
                     /locus_tag="VE783_01590"
     CDS             complement(14281..>14510)
                     /locus_tag="VE783_01590"
                     /inference="COORDINATES: protein motif:HMM:NF039905.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52112.1"
                     /translation="VCLVGVMSKLKVLFWLPTVFFGQHLRIRQVEYLQTSRLKLDTEP
                     PLDIYADGEPAGQTPAEFRMVPRALRVIVPE"
BASE COUNT         3165 a         4296 c         4134 g         2915 t
ORIGIN      
        1 cggtgggaac ttacgccatc gttgctacgc tgtctgacaa cggaactggt gcgctggcca
       61 actacactgt gacggtcaac aacggaactc tcaccgttaa cccggcgccg ctgaccgtag
      121 tggccaataa tgcgaccatg atttacggtg acccgctgcc ctccttcacg ggaacagtta
      181 ccggaatcaa gaatggtgag aacatcaccg cctcctacag caccacggcg acttctgcca
      241 gttcggtggg aacctactcc attgtgcctt cagtctcgga taacggcacg ggagttctct
      301 cgaattacgc ggtgacgctg accaatggca cgctgaccat caacccggcg ccgctgactg
      361 tgacagccgc aaacgccacc atgatttacg gtgatcctct cccgagcttt accgggacga
      421 ttagcggaat caagaatagt gacaacatca cggccagcta tagcactaca gcgacttcag
      481 cgagcccggt gggaacttat tccatcgtgc ccgccgcgtc tgacaacaat acgggcaagc
      541 tcacgaacta cactgtgacg ctcgtgaatg gcacgctgac cattaaccag gccccgctga
      601 ctgtgactgc ggcgaacgcc agcatgacgt tcggtgatgc ggttcccgcg cttaccggaa
      661 ccatcaccgg aatcaagaac ggtgacgcca taacggcctc ttacagcacc acagccagct
      721 ctagcagccc ggtggggaac tatccaatcg tgcccaccgc atctgacggc ggcactggca
      781 aactcgcgaa ctacgctata acggtcgtga acggaactct caccattagc cctgcgccac
      841 tgactgtgac cgcggcgagc gcaaccatga tctacggtga tcctattccg gctctgagcg
      901 gcacgattac cgggatcaag aacggtaaca acatcacggc cagctacagc accgtggcga
      961 cctccgcaag cccggtggga gcttatccca tcgtgcccac ggtttctgac aacggaaccg
     1021 gtgcgttggc taactacact gtgacgctcg tgaacagcac tctgaccatc gggcaggctc
     1081 ctctgaccgt cacgggcgcg aatgcaaccc gtgtctacgg cgatccgaac ccagccttct
     1141 cgggaaccgt gaccggcatc aagaatggcg acaacatcac tgctacattt gccagcgcta
     1201 cggatcccac cacgaccgtg ggtaactacc cgatcgtggg cacggcttcg gataacggaa
     1261 ctggaaccct ggcgaactac aaggtcacgc tcgtgaacgg gacgctgtcc atcactccgg
     1321 ccccattgag tgcgaccgcc aacaatgcga cccgcgtcta tggagatccc aacccggcct
     1381 tcaccggaac catcaccggc ctgaagaacg gtgacaatat caccttcggc gcgaccagtg
     1441 ctgatccgac cgttgcagtt ggcacgtacc cgatcgttcc tgccctggtc gatccgacgg
     1501 gcaaactggt caactacacg gtaacggcta cgaacggaac tcttactgta actccggctc
     1561 ctctgaccgt gactgcggct aacgccagca tgcttttcgg agatccggtt ccaaccctca
     1621 ccggctcagt tagcggcatc aagaacggag ataacatcac cggcatctac acgacaacgg
     1681 cgagttccac cagcccggta ggagcgtatc cgattactgc ctcggcatcg gacaacggta
     1741 ccggcaagct ctcgaactac acagtaagcc tcgggaatgg gaccttgacg gtcaatccgg
     1801 cgccgctgac cgtgactgcg agcaacagca gcatgattta cggtgatccg gttcccgcag
     1861 tcaccgggac cctgaccgga gtcaagaacg gcaacaacat tacggcgggc ttcagcgttg
     1921 ccgtaacgtc cgccagccct gtgggaactt acgccatcct ggctgcggtg tccgataacg
     1981 gcaccggagc gctggcgaat tattcggtaa caatcaataa cggcgtgctg ctggtggcgc
     2041 ccgctccgtt gagcgtgacc gctgccaacg gcagccgctt gtatggcgat cccaacccgg
     2101 tcttcacggg aacaatcgtc ggcatcaaga acaatgacaa catcacggct gccttctcca
     2161 gcgccactga cccgaccacg acggtaggga actatccgat cgttccttct gcctcggata
     2221 acgggaccgg agcgctcgca aattacaccg tgacactcaa caatggaact ctaaccatca
     2281 accaggcgcc gctgaccatt caggccaatg acgcgaccgg cactgcaggt cagccgatac
     2341 cggccttgag cggaaccatt actggtatca agaacaatga cacgatcacg gccagctaca
     2401 gcaccacagc tgaccaaacc agtcctgcag gtacgtaccc gatcactccc agcgctgacc
     2461 cgaatccgtt gcttgtcaac tactcgatca cgctcatcaa cggcacactc accttgcaat
     2521 aagcaacgaa cgttgctcga tagcttacag gccggcaaac cagccggcct gtactgtttt
     2581 atcctctttc tttatcttcc cttcgtcgtt cagcctgcaa agttctttgc gccgcggtgg
     2641 acctggtaag cgcacttctc tcctgctaaa tacaactatc ggccggacag aagaccagaa
     2701 gaggatgcgc accagcgtac ggaccatata cgttcgcgag tgcctgtccg ggttgcgccc
     2761 cgtaaagccc gcaaaagatc gtcagtttct gcccgtcttt tccacaattg aattctgtat
     2821 aattaatcgt gcaccccaac gcgccccacg gccactggca gcagccaatc tcgagccggg
     2881 gaggcgaatc cccaaaaatc agctcagcac gatccgcagc tctaaccatc agcgtgagga
     2941 gttcatggca gcgaaatata ttttcgtgac cggtggtgtt gtttcgtctc tcggcaaggg
     3001 tctggcggct gcgagcatcg gcagcctctt ggagagccgc gggctcaagg tcaacctgat
     3061 gaagtttgac ccgtacctga acgtggaccc cggaaccatg tcgccatttc agcatggcga
     3121 agtctttgtg accgacgacg gtgcggagac cgacctcgac ctcggccatt acgagcgctt
     3181 cacccacgcc aaactctctc gcgacaacaa ttggaccacc ggccgcattt acgaacagat
     3241 cattaccaag gagcgccgtg gcgactacct gggcaagacc gtccaggtga ttccgcacgt
     3301 aaccaacgaa atcaaggccg cgatgaaaaa agtcgcgcaa gaggtggaca tcgcaatcgt
     3361 ggaaatcggc ggcaccgtgg gtgacatcga atcgctgccc ttccttgaag ccatccgcca
     3421 gatgcggcag gagctgggac gcgacaacac tttgttcgtc cacgtaacgc tggtgccgtg
     3481 gattggcgca gccggcgagc tcaaaactaa gccgacgcag cactcggtga aagagctgct
     3541 aagcatcggc attcagccgg acatccttct ttgccgcaca gaccgcttcc tctccaagga
     3601 tttgaagggc aagatcgcgc tcttctgcaa cgtggaagat gaagccgtga tcacagccaa
     3661 agacgtggca tcgatttatg aatgcccgct ggtgttccac cgtgaaggtg tggaccggct
     3721 tctgctgcgc tatctgcgca ttgattccag ggagcccgac ctcacgcgct gggaagaact
     3781 ggtgcacaag atctataacc cgaaagatga agtgcacatc ggcattgttg gcaagtacgt
     3841 ggagtatgag gactcctaca agtctctgaa agaagcactg gtccacgcag ccacggctca
     3901 gaacctgaag ctcacggtca cgtgggtgga agcggaaggg ctggagcaca aggacgcagc
     3961 aaatcgcgat tttgaaatac agctcgaggg cttcgatgga atcctggttc ccggcgggtt
     4021 tgggaagcgc ggcattgaag gcatgctcaa tgctatccgc tatgcgcgcg agaagaaggt
     4081 cccttatttc ggcatctgtc ttggcatgca gacggcctgc attgaatatg cccgcaacgt
     4141 ttgcgggctt gacgatgcga attccagcga attcgatccg gctacggcgc accgcgtgat
     4201 ctacaaattg cgcgagctgc gtgggattga cgaactgggc ggcaccatgc ggcttggcgc
     4261 gtggacctgc aagctggagc cgaacagcaa tgcctcagag gcgtacaagt ccgttgagat
     4321 cagcgagcgc caccgccacc gctatgagtt caaccgcgag tatgaagcga tcctcaccgg
     4381 cgccggactg cggattaccg gagcgacgcc ggacggcact tacgttgaga tcgtggaaat
     4441 ccccgggcac ccgtatttcc tgggatgcca gttccatccc gaattcaaat ccaaaccgct
     4501 tgagccccat ccgcttttcc tctccttcgt aaaagcgtcg tacgcaaaca gcatggctcg
     4561 gcgtgaagcc aagcagaacg aagacgtgga gatgttcctg cgccctgaac ggattgtaag
     4621 aaggtaaccg gctacgccat ggagcaggca aacgcattca acctggacgg attcacggtg
     4681 ggaggccacg cgctcttctt gattgctggt ccctgcgtga ttgaaagcga agaacacgtc
     4741 ctcaaaatgg cggaggcgat taaagccgtc acaaaaaaac tcgggatgcc gtacatcttc
     4801 aaggcgtctt acgacaaggc caatcgcacg tctgtaagaa gctttcgcgg cccggggatc
     4861 gtggaaggct tgcgcaccct gcgcaaagtg aaagagcaga ccggtctccc ggtcctgact
     4921 gacgttcacg aagcaaaaga cgttccggcg gtggctgaag ccgtggatgt ggtccagatc
     4981 cccgcgtttc tatgccgcca gactgacctg ctggtgcagg caggccggca cgctaaatcg
     5041 gtaaacatca aaaaagggca gttcgtctcg ccctgggaca tgcgccatgc cgtggagaaa
     5101 gttcgcgacg ccggcggcaa aaacgtcttc ctgaccgagc gcggcagctc gttcggttac
     5161 aacaatctgg tcgtagacat gcggtcgctc gcgatcatgc gtgagttcac accggttgtc
     5221 ttcgacgcca cgcattcagt ccagttgccc tccgcagggg gaaagggcga ggcagtttcc
     5281 ggtgggcagc cgcaattcat acccctgctc tcgcgtgccg cagtggcggc cggagtggat
     5341 ggcatattca tggaagtgca cgacaatcca gcggaagcga agtcagacgg agcaaatgcg
     5401 ctcgacctga agctgctgga atccgttctc agggagctgc ttgccgtacg aaaagcggta
     5461 agcggttaaa aggttcaagg ctcgtccggg agaggaactg tcgtgcaggg gcgagtcctc
     5521 tcccgccaaa aacgaaacga gcgcagccaa aaactaatac tgttgcggag ctgaacctcc
     5581 cggcgagggc atcttttcct ggtggctggc cgctggctca ggcgtggttg ccgcagggtc
     5641 cttcactgct ttgtctcgcg ctgccgttac gcgcgccaga taatcgagaa ttgccgcggt
     5701 atcctggtcc cccatgcgga gattaggcat cagcacttct ttgtattgct tgaacagcgc
     5761 cgtggcgacc ggatcttttt cttgcagcat cttgtccggc atcatgatga atcgagtcag
     5821 ccacgcgttc tcacggacgc tggtcacgcc gatcaggtct ggcccaattt tgtctccctg
     5881 tcccacggtg tggcacgcgc cgcagcgggt cctgaagaaa tactcgccct tatcgaaatt
     5941 catgggcttt gcctgctcat agctggcgcg cgtttccttg gtgcggtctt tatgaggatc
     6001 cataaagtcg cttagcatgg tggcaaggaa gcgaggatta tccgtggcgg agttgcgcat
     6061 ccactggcct gtggtttcat tacccaccag taggccaggc gtatggccgt cgcgattgtt
     6121 tggatcgggg tcagagtaga gacccagctt cttgctgacc tggtcgatat cgtccttctt
     6181 gccggtcagg aagagccacc cgggtccggc atgatacttc tcggcgtaat ctttcagcac
     6241 ctcgggcgtg tcatgcttgg gatcgagcgt gatggagtag aagaagatgt ccttccccat
     6301 ccggtcgcca agatatctct gcacctgcgc caggcgcgcc gtctccagcg ggcaggagtc
     6361 cacgcaccgc gtgtaaatca tgtttacagc cacgatcttg cccttcagca gatcgtcata
     6421 cagctttacc tttttgccgt cttgcgtggt cagttcgata ttggggaagt aattggctcc
     6481 ccatttcgaa ttgtccagcg cagacgaacg cacgccctgg aaaatcccca gacctatgcc
     6541 caaaacggcc agtgcgagcg ccatcaactt agatttcatg aactttaccc cgcaactcag
     6601 ttcggtaccc gtgcgaaaag cattgtatct aaattgaagg gccgcaggtt cgcggccctt
     6661 caaggttttt acattaccaa ggtctagacc ttagaacgca gtaggagcga tgtcgtccgg
     6721 agcttcgaac gtgacgccct gggcagtcgg gatcggcgtg ggcagcggac gcaggaacgg
     6781 cgcgccaccg ttatcgattt cccaacgcac gagcatggcg ttgtcttcgt ggaccgtgtt
     6841 gtggcagtgc tccatgaaca tgccgcccca gtcacggaac tgcatggtca gggtcacgct
     6901 tccacccgga cgcagacgat agacgtcctt gcggcctttt tcccacgccg gcacgttgga
     6961 ggcgctgccg ttgcgggcca gtatctgccc ttcttcaaag tggatgtgga tcgggtgatc
     7021 ccagccaccg ccgccgttca ccagggtcca gacttcgcgc gtaccgaagc tgggcgcagc
     7081 ggagatgcgg ccgaagtcag cgttcaacgt cttgccgcca tccaccccca caccccaggg
     7141 tccaggcttg tttcccgcac caagaatgaa cgaggtgacg gggtcgttct gcggctgaga
     7201 agcgccggag ccgaatacga acgtacgctg ccgggaaacc gggatgctgg aaagatccgg
     7261 gttcggaatc atgacattgg gaacctggct ctggtcgggc tgagccgggt cgcgcacgat
     7321 gcggaactca aggaacttgc caacgcaggg atcaccggag ccgccggaaa gggcctgtgc
     7381 aagcgtgaga tccttggccg gctttttgcc gtcctggtgc tcacacatgt tcacgagcca
     7441 caccttgctg ccgatggagt agcgcgagaa gtcgatcacc cagtcatagc gctcggcaat
     7501 tccctgctcg tcagactgag tctgcacaac cggtgagggc agcaggttac cgtcgttggc
     7561 gatctggatc atcggtgagc cgtcagacag gccgtacttg aagaagcgcg acacgctggc
     7621 gttcaggatg cggaagcgat acttgcggcg ctctacttcg aagaacggct tgtaggtcag
     7681 gttcacggtc atcacgtcgc cgatgaaacc atcgaagtcg aagatgtcca tgaagagctg
     7741 gccattggcg tcaaacgcct tctcagcgag catcagattg acgtcgtact ccaggttgcc
     7801 ccagctcttc gccgtgccgg agggcaggcg gaggttcacg ccgtcattga tggcttcgtt
     7861 gccacgatcg agcgagctgt agatgttgaa catcgcagcg ttgcccttgt acacgttctg
     7921 gctggtgaag gtgaacatgt gatcgtggaa ccagtgggtc gacatggttt cacgccagtc
     7981 acccggcacc ttgttgatgc cgccattgtc agcggggctg ccggcgcgag gatcggtcgc
     8041 tgcggtgttg atggtgaagt ggcccgcgag cacgataggc cagtgatagt catagaactg
     8101 gccggggaag aagtaagctc cagtgaagcc atcgttttcc gcgccgtggt gaccattgtg
     8161 ctcgtgggtc gagatcgtat gacgaccgaa gccgttgttc gccgcgacat ctgctggcag
     8221 cttgttgtga tggcggaaca ggatcggctc gccataacgg ccctggacca acttcggcgg
     8281 aatggttccg ttgaaggtcc acaccgcgtt aggctgctgc gtgggcagct gcggatggaa
     8341 cttaagcgga atcgccgctg tggggtcgat accggagttc atgttcgatg ccacaccggg
     8401 gttgtaaacg gtgttcgtct gcgcctgcgc ctgcgacatt tcaaccgaaa cctgaggcag
     8461 gaactggttg aagcgctggt gtgcccaaat gtctcccggc ggacggcctt cgattgggcc
     8521 tgttccaccg cccagaacag gatctaccgc ctgctgggtc tggttggctg cagcctgggg
     8581 aaccggcgtc aaatcgccgc ccagcggatt gtttccgcgc tggatgaggt caaagcgggg
     8641 catgggagtg ctgaacggct gaactccaaa gagcggactg gggttcaggc cggtcggaat
     8701 ggaagcttcc gaactggcaa cgaacgggtt cagaccgtga ataggcgcca gcgccccggc
     8761 tgaagtaaag agaccccact taatgaggtc acgacgggaa acctggcctt gagaataagc
     8821 ctttagaatt tcagctcgat tcttccgggc gttctcggct tccttaagac gcgctttcga
     8881 tgcgtctttt gggaggtaaa aaatgctcat tggctacgct ccttattgtt ttgctcctgc
     8941 taagaggcga gtcgtgcata ggcattccta ttgcacgaag ccggttcccg gagccggcat
     9001 agctccggtt gctccctggg attatgagga gccgtcaaag caggaacccg tttacaacac
     9061 ttcgctctgg cttgccttgc gaagcgaaaa gcccggaagg gcatcgtatt ggtaaggccg
     9121 caccacggcg cggacacttc cctctcttac gattacaagc caagagcaga gtagccagtg
     9181 aggaaacgga aaagtattag aacggaatta aaaaccctaa tacgccacta aattctcaaa
     9241 tgagcaaccg gaaaacccga tttcgcagcg gatcaggtgc agtttgccat cagaatcccg
     9301 cacgggccgc cagcatctat attgataagt atgaatggcc tcaaaacaac ttttctcttg
     9361 accgcgatga cggtcctggc agtgctggtg ggagactact ttggcggacg caacgggctg
     9421 gtgttcgcct tcgtacttgc cgcgatcatg aacttcgtct cgtatttctt ttctgacaag
     9481 attgccctgg ccatgtaccg ggcccagccg gtcacgcgcg aacaactgcc gcgtgtctac
     9541 gccgttgtgg aacggcttgc ggctaagatt ggcataccca caccaaagat ttacgtcatt
     9601 cccacggatt cgccgaacgc ttttgccacc ggccgcaacc ctaatcacgc ctcagtcgcg
     9661 gtgacggaag gcatcctgaa cctgatggac gatgaggaac ttgaaggcgt gctggcgcac
     9721 gagctcgggc acgtacgcaa ccgcgacatc ctaaccagct caattgccgc aaccatcgcc
     9781 ggctctatca ccatgctggc gcgactgggc ttttggttcg gcggagcgct gggcggcgac
     9841 gatcgcgacc gccgcggcgg gggagccggc gcgctgctca tgctgattct tgcccccata
     9901 gccgcaactt tgattcaact tgccgtatca cgcacccgcg agtatgaagc ggacgccagc
     9961 ggcgcccact acactggaaa tccatacgcc ctggcgcgcg ctctgcagaa gctggacgct
    10021 tattcgaagc gcattcccat ggtggcaaca ccttccacgg cgcacctgtt catcgtgcag
    10081 ccgctgctcg gcatgaactt cggcaatttg ttctcgaccc atccgcccat tcacaagcgc
    10141 atcgagcggc tgacgggacg cccggagcag tttcagtaac gatcgtcgga aatcctcaat
    10201 tttctaacgg cccctttcgg ggcccttgtt tctgccttac tgctctcgac cggcattcgc
    10261 tcacatgatc gcactttgcg agtagtatat tgatgccccg ttcgtgaaat atcctggagc
    10321 catataaaca aagaaaggcc agagaatgaa gacgatgctc tcgctcgccg tgcttgtatt
    10381 ggcgatcagc tctgccaaca gccagtctca aaaatcaaca aagtctgcaa ccgactggaa
    10441 agccgttgac gatgcaatgg gccgcgctgg gcaggaccag ccggacggta cccacaagtt
    10501 ttccatggct cggggagacc tgaaagttac cgtcgacgac gtgcaagtga agccaggctt
    10561 cgccctcggt tcatgggcgg catttcacaa aattgccaaa ggctcagagg tcatgggaga
    10621 tctggtgctt gcggaagatg aagtcgcacc cgtaatggac aagctgcaag cggcaggcct
    10681 cgaaatcact gcgctgcaca atcatctgct gcatgaaacg cctcgcgtca tgtatatgca
    10741 tatccacggt aatggagacg ccgtaaagct ggcttcgggc atcaaagacg cactctcggc
    10801 gacaaagact cctccgcctt ccactccgcc tgcccagccg ccggacctcg gcttcgacac
    10861 taaacagatc gacagcattc ttggacacct gggcaagaac aacaatggcg tttaccaggt
    10921 ggcggtgcca cgagcggaaa agatcacgga aaatgccatg gtagtgccca actccatggg
    10981 cttggcaacc gcactgaact tccagccgac cggcggcggc aaagcagcca ctacaggcga
    11041 ctttgttctg atcgggaagg aagtgaatcc cgtgatcaag gccttgcgcg ccggcggcgt
    11101 gcaggtcact gcgctccaca gccacatgct gggtgagcaa ccccgactct tcttcatgca
    11161 cttctgggga aatgatgacg cactgaaact cgcgcgcacg ctgcgcacag cgctggatca
    11221 gactaactcc gtcaaagcga agtgagtttc gggtcaagag ctttgatcgt cggaagcgca
    11281 ttggggcgtt ctcctggggc tttccgtctg cgcgctacgt gatcgccagt tccaagccgc
    11341 cggagaactc tttcgtaatc gcatattcaa tgtggagcag gcgtcgcggc atctccgcag
    11401 ccgacttcga cgacgcatgc accaccagcg gccgcatcgc cacaattccg cccttccctg
    11461 ccaggcattc cacaggctca cgctcggcgg cacagcgggc gatctcatcc tcggtaagca
    11521 cgcccattct gtgggtggca ggaaggactt tgagcggacc attgcgttcg gtcgaagcat
    11581 cgagatggag ccgcagagcc agcacctgat tcagagcgaa ggcaggcgca tgggcatagg
    11641 tcaccccatc tttcactgac cacggtcccc agccgggaag gttcatcttt gctcgcagtg
    11701 ggagcgcagt gtcctgatgc caggtgacga gccaattgga ttcgggagac ttgtcaaaca
    11761 aggttgcacg aaacgggaaa gcttccggcc caagaacttc ctgcgccatc gctaagagcc
    11821 gacgatcatt cgcgatcacg ttcacacttg gatggttcag aacgtgacga acggcggcgc
    11881 ggccgcgtcg cgagaccagg tccgccatgg ccaccagcag caccatcact tcgctcgcgc
    11941 ttacgacttc agggacaatc gcgtaaccgc gctcgtgcag ctgagctgtc cagctttgtt
    12001 ctatcgccga agttgtgctc aaacgttctc cattcgctga ctgccagctc ttacaactga
    12061 aaccggaaga ccagcacagg cattctactg gcgttcggga gattccggct cctcacgttg
    12121 gtaacagtcg ggaatgtgtt atttgtccag ccggaaatac gctaccagcg gtagatggtc
    12181 agaggccatg agcgccatgc ggctgcggtg cagaacgaac tcttccaggg cgagctgccg
    12241 gtcgaagtac atatgatcca aatgcatgat cggcagcacg ccgggataag tcttgcggcg
    12301 attgagatgg aactgaatgt cgacgctttc aaagcgctgg gccagcatgc gcgaaaccag
    12361 ccctcgggtc cactcattga aatctcccag gatcaggcgc gggtgtttca gcttgggtga
    12421 gagcagcacc tgccggctca ccagcagttt ggcctgcttg cgccgctcca ggtagcccgt
    12481 tcccaggtgg atattgaaga cgtgaacgat cttgccgggc gcaacctcaa gatccaggcg
    12541 caagcagccg cgcgcctcac gacgagacgc ggtgagatcg taagcttcaa catccttaat
    12601 gggaaaacgc gtgagcagca cgtttccata ggctgcaccg cgatatttgc gggtttcgcc
    12661 catgcggtaa tcgagtccta cggcgtcggc cagatactgc gcctggttct gctcgcggcg
    12721 gccgcccgcc aggctcatga tttcctgcag ggcgatgatg tccgcatcca gctcttgcag
    12781 cacctgcgca acccgatgcg gacggatgcg cccgtccatc ccacggcact tgtgcgtgtt
    12841 gtaggtggcg atcctgaagc ttggcgttcc cttgaccatc cggcccttca tcccaaccgc
    12901 gcgacgaccg cgcattctga gaggcagttg ccaaaccagc tagaatagct cagtgacaac
    12961 ctcgactcag cggcgcaccg cgcggcccgc ccctctcaag aataaaccaa caatccttca
    13021 ggtccctgcg ctgcgcaaac tgccatggct ggtgcatggc ttcagcaccc gtcccggcgg
    13081 gagttctacc gcatatgggg gtaagtcact gaatcttgga ttcaccgcgc acgatgagcg
    13141 tgcccacgta gagcacaatc gcgcgctgct gctgggcaac attggcgcgg gtaccgcgaa
    13201 aagaccctgg ccaatcgcaa cggttcgaca gattcattct gacctgatcc acatggtccg
    13261 ttcgcctgaa cccaagcgcc cagccggcga tggcatggtg acgaacgtgc ccgaaattgt
    13321 gctggccgtc ctcacagcgg attgctttcc cgtgctgctg gtcgacaaga agaaccgtgc
    13381 cgtgggcgcg ttccatgccg gatggcgagg tacggtccaa cggatcgccg tgaaagggct
    13441 gggcataatg cggcacgaat acggcactga gccgcgccat gtgctggcgg tcataggacc
    13501 aggaatccag aagtgctgtt acgaggtgga cgaagaggtg cgggcaaagt ttgagtcgca
    13561 gttcgccttt acagacaagc tctttcacta cacgcgagat tcagacccag tccgggagaa
    13621 gtatcccctt ctcttcatga acatgcgcgc gcccggccac ggcgacttgt gcgagaagct
    13681 gcatcttgat ctgcatctcg ccaaccggct gcaactggaa gaagcgggag ttccggcgaa
    13741 acaaatcgcc acgatctcag aatgcaccgc ttgcgatacc cgcaggttct tctcgcatcg
    13801 gggtgaaaag gggcacaccg gccgtatgat ggccgctata ggaataaaga agtaagtctt
    13861 tttattgctg aggcgggggc tcggccgccg ccgtgctggc agcaggcgct gcttcgccgt
    13921 ggttgatcac gtctttaagc tctttgcttg gcttgaagta cgggattttt tttgccggca
    13981 cttccacccg ggcgccggtc ttgggattgc ggccaacgcg aggcttgcgc tggcgggtac
    14041 ggaaactgcc aaagccgcga atctcaatct tgtcgcccgc gcgcagggag cgaaccacgc
    14101 tgtcaaagat cgtttccacg atgatttcgc tgtctttgcg ggtaagttcc gctaaacgtg
    14161 agacttcttc gatcaggtcg gctttggtca tggcctttat tccaccccaa atatgcggcg
    14221 acgtcaagaa aggtttttcg ctgagttatt tattctaaag ggctttttag cgcgccaaca
    14281 ctactcagga acaataacgc gaagcgcccg gggaaccatg cggaactcgg ctggagtttg
    14341 accggcaggt tctccgtcag catagatatc cagtggtggc tcggtatcga gtttcaggcg
    14401 ggaggtctgg agatattcca cctgccggat ccggagatgc tggccgaaga agactgtggg
    14461 cagccagaac aggaccttca acttgctcat gacgccgaca aggcagacat
//
LOCUS       DASQYP010000056         2912 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_276852, whole genome shotgun sequence.
ACCESSION   DASQYP010000056 DASQYP010000000
VERSION     DASQYP010000056.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 2912)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2912)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2912
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_276852"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(156..1052)
                     /locus_tag="VE783_01595"
     CDS             complement(156..1052)
                     /locus_tag="VE783_01595"
                     /EC_number="1.14.19.-"
                     /inference="COORDINATES: protein motif:HMM:NF012699.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006629 - lipid metabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fatty acid desaturase"
                     /protein_id="HYX52113.1"
                     /translation="MSLTNDRTFREEISWITTFFMVAFHIGAVAALFMFSWKALALAA
                     FLWWVSGSLGIGMAYHRLLTHRGFKTYKWMEYFLTLCATLALEGGPFFWVATHRVHHQ
                     NTDVDGDPHSPRDGGFWAHMGWIITGRVMHNHSDALLPYIPDLRKDKFHTFISKYHWV
                     PITLSGVVLLAIGGWSWVFWGVFLRTVVGLHATWLVNSATHMWGRQRFLTGDTSKNSF
                     WVALLTFGEGWHNNHHAYPQMARHGLAWYEIDLNWYGLSVLRMLGLIWDVKAPSLQAL
                     EEKAAARASLLQPVASAAGGDD"
     gene            complement(1691..2341)
                     /locus_tag="VE783_01600"
     CDS             complement(1691..2341)
                     /locus_tag="VE783_01600"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52114.1"
                     /translation="MFLLAFYLVLAAGLCALWYWLWMRHRQRRAGEIARWIQSAISGQ
                     GCVLGIRWLSAATFRVPLRLTRSPFHNASVKIEMAPHGLPVRWLMSKFRKEQETLIFQ
                     ADLDLPPSFALHLQNFRWFARSSRKPVREDQNWQIHRADPIIISTRLDWQREVSDVMV
                     SLAESEPQDFLRIDFQRRSPHFSVKLPLEAIAPGAPGRSYVLDSMKELASRSANIS"
     gene            complement(2470..>2912)
                     /locus_tag="VE783_01605"
     CDS             complement(2470..>2912)
                     /locus_tag="VE783_01605"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HYX52115.1"
                     /translation="FMSVVHLARAVIPYMQRHRWGRIITITSVTVKQPLADLVLSNAV
                     RAAVVGLVKSLSNEFGKDGILVNNVGPGFTATERLKELAGVRALAGGTSPEQIYELWA
                     ADAPVKRLGEPGEIADLIVWLASERASYITGQTVLADGGIYHGL"
BASE COUNT          660 a          790 c          874 g          588 t
ORIGIN      
        1 gcaatctcgg aaaatttgct tcgacaatcg gctctttctg acggtacaaa gacgcgaatg
       61 agtatagggt tccctcgctg cgctcgggat gtaaggcaga aaaaatggct cccgaaatcg
      121 ggagccatat ctcaggggaa caaggaactt cttttttagt cgtcgccgcc ggcggccgaa
      181 gccactggtt gcagcagcga tgcgcgggct gcggcttttt cttccagcgc ctgaagagaa
      241 ggcgccttaa cgtcccagat cagtccgagc atgcgcagga cgctgaggcc gtaccagttc
      301 aggtcaatct cataccaggc aagtccatga cgggccatct gcgggtacgc atggtgattg
      361 ttgtgccagc cttcaccaaa cgtgagcagc gcaacccaga agctgttttt agaggtgtcg
      421 ccggtgagga agcgctgccg tccccacatg tgcgtggcgg agttcaccag ccaggtggca
      481 tgcagcccaa ccacagtgcg caggaagacg ccccagaaca cccaggacca gccgccgatg
      541 gccagcaata ccacgccgga gagcgtgatc ggtacccaat gatacttgct gatgaaggta
      601 tgaaacttgt ctttgcggag atcgggaata taggggagca gcgcgtcaga gtggttgtgc
      661 atcacgcggc cggtgatgat ccagcccatg tgcgcccaga agccgccatc gcgcggtgaa
      721 tgcggatcgc catctacgtc agtgttttgg tgatggacgc gatgcgtggc cacccagaaa
      781 aacgggccac cctccagcgc cagcgtggcg cagagggtga ggaagtattc catccattta
      841 taggtcttga accctcgatg cgtcagaagc cggtgataag ccataccgat gccaaggctt
      901 ccggaaaccc accagagaaa agccgccagg gccagcgcct tccagctgaa catgaagagc
      961 gctgccaccg cgccaatgtg gaaggccacc atgaaaaagg tagtgatcca gctgatttct
     1021 tcccggaaag tccggtcatt tgtaagactc aagggtgtct cccgtccgca aaaagtttgt
     1081 ctgagtgttt gatctccaac gtatcaggaa ggactgagag gcactgtaat agttctgtaa
     1141 ttgtggattc gcgtaatcca ttcggatcaa tgtaagttgc tgatttggaa agcacatgaa
     1201 acaggagcgt gctaaggcga aagagggtta cttcagttca gattaccgga tgggagctat
     1261 ctcataatgc gctaaccagg ctgaaaaagg ttcgggcgcg tttgatcgcc cggccggctt
     1321 ctcgcttgca tattgaatgt agccttttgt taactgtgta gcagaggcgc ctcgcctgtg
     1381 ccgcaagaat gacaatttac caccgcaaat tgccgcagct tgaaagagac ggcgcttaat
     1441 gatgaggcga agtgggtggt ccggcagtgg attcactatc agctgagcgg gtgctttggg
     1501 gccaagactc tctacatcgc cgtgaacgtg gtgggaaccg ggacccggag tccggtggaa
     1561 tatccccggt attggcgacg tggcatgaga aggcctaaac gaaagcagaa gatcaaggac
     1621 agtaaccggc accggcgagg gcgcctgtgc tacaaagcgt gtgcccccga tggaatcatt
     1681 tctgaggctt ctaactgatg tttgcgctgc ggctggcgag ttctttcatg ctgtcaagca
     1741 cgtagctccg gcccggggct ccgggtgcga tagcctcaag gggcagcttc actgaaaaat
     1801 gcggagagcg gcgctgaaag tcaatgcgga ggaaatcctg aggctcggat tcagccagcg
     1861 agaccatcac gtcagagacc tcgcgctgcc agtcaagccg cgtactgatg atgatgggat
     1921 cagctctgtg tatttgccag ttctggtctt cgcgcaccgg cttgcggctg ctgcgggcga
     1981 accagcggaa gttctggaga tgaagcgcaa acgagggcgg cagatccagg tctgcctgaa
     2041 agataagcgt ctcctgttcc tttcggaatt tgctcatcag ccacctcacg ggcagcccgt
     2101 gaggcgccat ctctattttt acgctggcgt tgtgaaacgg agagcgggta aggcgcaagg
     2161 gtaccctgaa ggtagcggcg gacagccagc ggatgccgag cacgcatccc tgaccggaga
     2221 tggctgactg aatccagcgc gcaatctcgc cggcgcggcg ctggcggtga cgcatccaga
     2281 gccagtacca gagcgcacaa aggcctgctg ccaaaaccag gtaaaaggcg agaaggaaca
     2341 tcccgccact aagatgctaa tttgctccgg gatgatgttt tttgctcacg gttttgcgcc
     2401 gccggtcacc ggttcgactg ggagcggggc cgagttctgc accgcatttt gtgcgactct
     2461 gagccatgct cagagcccgt gatagatgcc accatcggcc aacacggtct ggccggtaat
     2521 ataggaagca cgttcggagg ccagccagac gatcagatcg gcgatttctc ccggctcgcc
     2581 gagccgcttc acaggcgcat cggctgccca gagttcgtat atctgttccg gcgatgtgcc
     2641 gccggccaga gcacgaactc ccgccagttc tttcaaccgc tctgtggcag tgaagccggg
     2701 gccaacgttg ttcaccagaa tgccgtcttt gccgaattcg ttcgaaagac ttttcaccag
     2761 ccccaccaca gctgctcgaa cggcgttaga gagcaccaga tcggcaagcg gctgcttcac
     2821 cgtgactgaa gttatggtga tgatccttcc ccagcgatgc cgttgcatgt agggaattac
     2881 ggccctggca agatggacca cgctcatgaa gt
//
LOCUS       DASQYP010000057        18372 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_192454, whole genome shotgun sequence.
ACCESSION   DASQYP010000057 DASQYP010000000
VERSION     DASQYP010000057.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 18372)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18372)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18372
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_192454"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..852)
                     /locus_tag="VE783_01610"
     CDS             complement(<1..852)
                     /locus_tag="VE783_01610"
                     /inference="COORDINATES: protein motif:HMM:NF025006.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxypeptidase-like regulatory
                     domain-containing protein"
                     /protein_id="HYX52116.1"
                     /translation="MSPIARDFSRHAAGLNFYLAVKKTLSSRFFMVLVLFGVCLCFRP
                     LAAQVSADISGVITDQSGAAVVGAHVTAKNLDTGLTRTSSTDQSGRYRFVGLPVGMYE
                     VRAAREKFAEAVRSGIRLAVGQDATADLSLRVGQVTQEVKVEEDAPIINVSTQDISGL
                     VGERQVKDLPLNGRSFDLLMTLNPGIVNFSWEKTGGAGVSNSTTGNDFSVSGNRPQQN
                     LFQLNGVEFTGAAENNMQPGGTSGQLLGVDAVREFNVLRDSYGAEYAKRPGGQVNIVT
                     QSGTNEVH"
     gene            complement(1846..3144)
                     /locus_tag="VE783_01615"
     CDS             complement(1846..3144)
                     /locus_tag="VE783_01615"
                     /inference="COORDINATES: protein motif:HMM:NF017760.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HYX52117.1"
                     /translation="MRNILEQRGLRLVFTANLISMIGSGLNSAGVTWFVLQTTHSETA
                     LGLMLMLQTIPAMLLLPFSGVVIDRQDRRHLVMLLDALRGLVVLAIAVLALLGKAALW
                     QVYLMSILVAAGFWMFWPTMNALIQELTPESGFAHANSFILAGFQGGWLIAGAVVGFV
                     YNHIGLSGVLFIDFLSYVISFSCYLFVREGKVVVARPASVHHESEVARFFHDMREGIA
                     YIRQRPRLFFLGAAWALFMGGMLTQGIITAPFSDRLLKAGAVGYGWLNSGWAVGACGM
                     ALFTPRLLRLTGHRRAIGVAMAVLGCCLISLPYVGTYLHHPFRLFGVLVTAGLMLAVV
                     IYLVMGCGRAYGGVAITSGMMEMVPRHFMGRVQNTFYFAATALQLGLSMLVGSIAHRR
                     GLAPAFAIVGSLYLLACLSGTWPAAATLTPTEEKDLVGQT"
     gene            3248..3886
                     /locus_tag="VE783_01620"
     CDS             3248..3886
                     /locus_tag="VE783_01620"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52118.1"
                     /translation="MTRALVVALGLGLSGATNVSSTKPFNAYHDGEKIVFSPETTGTR
                     RQATFGPWNLGERLAEGKPRDQRLNLYLVVPGGQYRSVAQPEFDHNRVVNKYTIDGKP
                     REWDIFYCFVLDPTLKGDLRSESDLLMAAHQTFRPAALFEVSDVPASSALREKLGVSS
                     MADLRKYRRKNGTLPRAIIVPAQLAVRATAEQPDVTFTVPVAASASATQESH"
     gene            3963..4796
                     /locus_tag="VE783_01625"
     CDS             3963..4796
                     /locus_tag="VE783_01625"
                     /EC_number="2.5.1.145"
                     /inference="COORDINATES: protein motif:HMM:NF013915.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008961 -
                     phosphatidylglycerol-prolipoprotein diacylglyceryl
                     transferase activity [Evidence IEA];
                     GO_process: GO:0009249 - protein lipoylation [Evidence
                     IEA];
                     GO_process: GO:0042158 - lipoprotein biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prolipoprotein diacylglyceryl transferase"
                     /protein_id="HYX52119.1"
                     /translation="MGPLDVPTFGLFMIIAFAVAYLALAGDLKRRQIKIDPYNVVLYV
                     AIAGIIGAKIWHVFDTPEDRLHWQILGHPRELLNWFRGGFAWFGGFVAGIGTLLVLGH
                     RYKINLLRMLDIASPAAAIGYAVGRIGCLVSGDGDYGKPTNWAWPWGMAFPNGQMPTT
                     QTCPQAIDAAHPNGWPADCNVYPTPIYEFVAGVAIFWYIWRRGRAGQTLPPGVLTGEF
                     LMLSGAERFLIEFIRINPRVILGMSNAQFTALLSMIAGAVLMLWASRGSARPVVAAEQ
                     P"
     gene            5012..5650
                     /locus_tag="VE783_01630"
     CDS             5012..5650
                     /locus_tag="VE783_01630"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52120.1"
                     /translation="MEAIAAAYWRPVYKYIRLRWNLEPEDAQDMTQEFFARLIEKEFL
                     GAYDGRKARLRTFLRSCIDHMMMNRSRDAVREKRGGGAAHLSLDFSEAEHELRGAASV
                     PASMDEFFEREWVRSLFEIAVARLKEQCTESGKIKQFAVFEAYDLVDEDEKPSYAALA
                     KRFALAVTDVTNYLSFTRREFRRCVLDQLRAMTGSDEEFRHEARALLGVEPR"
     gene            5647..6612
                     /locus_tag="VE783_01635"
     CDS             5647..6612
                     /locus_tag="VE783_01635"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HYX52121.1"
                     /translation="MTRLTDNVIARLQTEMAVPDLAGTRYQPIKMLGSGGMATVWLVR
                     DTVLQREVAMKVLAPEASGGDLASRLQREAQLLARLEHPGIVPVHDAGTLVDGRTFYC
                     MKYVQGRTLDEFVQELGLRERLELLRRLAEPVAFAHARGFVHRDLKPGNIMIGAFGEV
                     LVMDWGLAKSLQERAGFAEPAGGQTIRELETAKTAHGTVLGTRGFMSPEQESGDQQEV
                     DERSDIFALGAILRLLLADAGEQPSRALRAIAEKAMSADKTLRYRSVLEFTADIGRYL
                     LGEPVAAYPETLMERSLRQLRKHQVAVVLVLVYLLMRLAFILFSK"
     gene            6675..7040
                     /locus_tag="VE783_01640"
     CDS             6675..7040
                     /locus_tag="VE783_01640"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52122.1"
                     /translation="MNKVLLGIVLGAVLGAVDGLTAWFTPEVRNAMVGIVIGSTIKGI
                     IAGVLIGFFARKVNSLVLGVIFGLAVGALLAFGIAAMQHGHYFAIMLPGSMVGLIVGY
                     ATQRYGAQPQITRTAGAKA"
     gene            complement(7055..7666)
                     /locus_tag="VE783_01645"
     CDS             complement(7055..7666)
                     /locus_tag="VE783_01645"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52123.1"
                     /translation="MMPLRSMPAWVSLAFVLLTTGCAHRKPVLVVPREQPATTAPVAA
                     EPTPAPSPQEPANAQQAEQTPEAQPSPSPVPEKAKKRIHAGTHAGGKKPSPLERSGTR
                     NTEVADARQPAATSTPVPISPTLSAADAARDQTSTEQLLQNTQNNLNSIKRQLSADEQ
                     NMVSQVRNYVAQSRQATKDNDPVRAHNLAVKANLLSIDLVKPR"
     gene            complement(7663..9561)
                     /locus_tag="VE783_01650"
     CDS             complement(7663..9561)
                     /locus_tag="VE783_01650"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HYX52124.1"
                     /translation="MPSISLKTKLVIAYTFMVVVIVATLATFYVYEVVRQKIRETDGD
                     IKVAAQEVWSLAKIALQVDLRDAKIDLNDSKAVNEVLTELLETDSAVNSTLESFISDQ
                     PTIYDIAITDSTGKVLSHSNSDLLGKTVAHRADLSALVNAGIREQIRAVYGPPRIYEV
                     RLPLERQDKTPFGEVRVGVITTYLKSEISDRMRHAIAASGLAIVLALIISVAVSNLSL
                     RPLTAINRRLDLLASGQAEPAEGGLRRSDEFGAVSSKIERLGRQVRDVKEVFSALKEN
                     LDQMMANLQDGVMLFTSDFRAVMVSASVERFVGKPRSAMLGCDVSEIFDNNNPVGRNI
                     LQAFRDRQPINQLEIQNEHGREVQITLDFIEERGERIGALLTLRDAESVHSIEHEIEL
                     SRRLAAIGRLTSGVAHEVKNPINAIVVHLEVLRQKLKEIDPDTRRHMDVIGSEIQRLD
                     RVVQTLVDFTRPVELRLSEIDLRKLVEDVVILASPAAEQNNVSIDRQNADHPLVSRVD
                     SDLVKQAVLNIVINGVQAMPEGGTLRLSLRREAESAVITIRDYGQGIPTDIRDKIFNL
                     YFTTKKGGSGIGLAMAYRVVQLHHGSLEFTSTPGHGTTFYLRFPLTETTTSGDQARIS
                     SEDSVSKA"
     gene            complement(9571..10968)
                     /locus_tag="VE783_01655"
     CDS             complement(9571..10968)
                     /locus_tag="VE783_01655"
                     /inference="COORDINATES: protein motif:HMM:NF025885.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54 dependent transcriptional regulator"
                     /protein_id="HYX52125.1"
                     /translation="MNAQEKVLIVEDEENERTGLAELISAWGYRTETARDGLEGLEKV
                     ATWFPGIVVTDFKMPRMDGLELLQRLADQPQPVAVVLLTAQGSIDVAVDAMKAGAYDF
                     IQKPVDPARLKQILQNAARQRGTSMELEATKRKLRDTGIFGQMVGNSKPMQEIFRLIE
                     MVAPSTASVLITGESGTGKEMVARTIHEMSPRKNKPFVAINCSAIPETLIESEIFGHE
                     KGAFTGALERRAGCFELAEEGTLLLDEIGEMPAATQAKLLRVLEDRKLRRLGSKVETS
                     VDVRVLAATNKVPEEAVARGELRGDLYYRLNVFNIHMPPLREHKQDLPILVESLLNDM
                     NHKHGRDVASVSDTVMQLFQNHNWPGNVRELRNTLERAVIVCESKTIEQRHLPPNFGS
                     SGVKVAASDGESIRLDVGTTVGEAEKALILRTLAATNNNKTRAAEILGISLKTLHNKL
                     KEYGTGSGAAGEVAS"
     gene            11192..12049
                     /locus_tag="VE783_01660"
     CDS             11192..12049
                     /locus_tag="VE783_01660"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52126.1"
                     /translation="MKTCSSILGSICITLAFASGPQVSRAQAAQHPLPKKQVPTPTVA
                     TIDPGTQLVAEFDGPLNVTKLKPGSEVKAVLTQDLISRGVLVAAAESKLIGHVAEVSP
                     RQAQTGDSRLLVIFDKLKSKKTKAEIPLTAIVLALAPPAPRSSMVDKPDQMMPPMTLS
                     PGQSVNNRTNGRGSTPTSSSGATLNSSTLVLLQSMNQTPVVQSTPGSDASAGMARHNP
                     AEQQKKAAAISSGAGVRGVYGMKKVALQGGTAAVPTPTVIIGLDSNLKLDRATQVILL
                     VTNPLVAKQ"
     gene            12208..14190
                     /locus_tag="VE783_01665"
     CDS             12208..14190
                     /locus_tag="VE783_01665"
                     /inference="COORDINATES: protein motif:HMM:NF027232.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52127.1"
                     /translation="MLRRLSIIIAALFWLVFSCLVSLHAQTWQPLGPEGGSVRSLAVN
                     PKKPERVLLGTSAGRIYASDDGGRDWTRFARLGNSAEMVLDHIVIDPVNPKIIYVAAW
                     NAQAPNSDGDVYYTRDDGKTWDLFAEMHGKSVRALAMAASNPKILVAGALDGIFRTLN
                     GGETWERISPEHHAEIRNVESIAIDPLNSDVIYAGTWHLPWKTEDGGKTWHSIKKGVI
                     DDSDVFTIVIDPQNTAVVYISACSGIYRSENGGELFRKIQGIPYSARRTRMLRIDPNE
                     HRAVYAGTTEGLWKTADAGATWKRMTGANIVVNDVIIDPRKSERVMLATDRAGVLASD
                     DSAETFAASNRGFTHRQVSALLVDRRDPAVLYAGLLNDKEFGGVFSSRDAGRSWTQLS
                     DGLDGRDVFVLRRAVDGSLVAGTDRGIFQLNKDAPRWVPLNITEEEITAPTPRGKVKA
                     VKAAGSALAARVNGLELVGKSWFAATSAGVFASFDAGTNWHRQELPAIKYAVSLAAAD
                     RMVVVAGRNAIAVSVNAGESWISPKPLDADFAINSVYVDSAGTIWLAAREGVFRSSDV
                     GDTWKRVTSLRLSNVTGLQFDEENQRILATGAASMNVFESSDNGRTWSAINAGWLVRQ
                     VQPAGGHLVAATPFDGVIIQSEGATAAIQGSSTGNR"
     gene            14342..15007
                     /locus_tag="VE783_01670"
     CDS             14342..15007
                     /locus_tag="VE783_01670"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52128.1"
                     /translation="MKATTQVLIAMVLAAMLAGCNSVAAPTAENPAAKDNPASAPADS
                     QQTPFAETKPLVIPAKTPIYVRLNESLSSATAQSGQVFSAILDEPLVLDGKTVAAQGA
                     PVRGKVVAARDSGHLHNSGYLRIALSSITVNGKAIPVETNSVFVSGGTYKKRNLAFIG
                     GGAAGGALIGGLAGGGKGAAIGSLIGAGGGTGAAYATGKKDVGFAAERRLGFRLAQPV
                     NIS"
     gene            complement(15081..17279)
                     /locus_tag="VE783_01675"
     CDS             complement(15081..17279)
                     /locus_tag="VE783_01675"
                     /inference="COORDINATES: protein motif:HMM:NF014896.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prolyl oligopeptidase family serine peptidase"
                     /protein_id="HYX52129.1"
                     /translation="MDVDLISVTLKRAAIGLTFIFVSICAMAQNHVTAPGSDTPTKSS
                     MKPPQARTETVVDDYHGHKIADPYRWLENAGSPETQKFVEEQNAYTRRVLDSTPVDKN
                     ALRSRIEQLLTIGRVDPPRPAGNYYFYTRRDGRQNQPVLYVREGLNGKDRPLVDVNAL
                     APDGTIALDWFFPSDDGKYLAYGTSPNGSEISTLEILETTTGKHLPEKIGRTRAASVA
                     WLPDNSGFYYTRYPRPGDVPAGQEMYNRHVFLHKFGDPANADGLKDPQLFPFAGESVD
                     PQSWPNIRLSNDGKCLIVKLEEGWAKSELYIKNLGDPSAALQKITTGKEFLYDADAYN
                     GQLYIVTNDEAPRFRVMKADCAHPQRENWREIVPQSEAVLEEAPVTGGRLFLRYTHNA
                     ASELKIADLDGKHLADVRMPMLGSIYALGGDWSSKEGFMGFTSFAVPTTVYQVNFDGK
                     ISIWAGVESNVDPNRYEVKQVWFNSKDGTRVPMFLVNRKGIAKNGKTPTLLSGYGGFN
                     VGRLPVFDRNAMLVLLEHGGIYADVQLRGGNEFGEDWHTAGMLEKKQNVFDDFIAAAE
                     YLISEKYTDKDHLAIQGGSNGGLLMGAALTQRPDLFRAVICQVPLLDMLRYQNFQIAK
                     LWIPEYGSAENPAQFNYIYAYSPYQHVKKGTVYPATFFMTADSDTRVDPMHAKKMAAL
                     MQADAPNGADRPILLRVDTKAGHGVGKPIAKLVEDNLDLWTFLFWQLGLK"
     gene            complement(17409..17855)
                     /gene="trxA"
                     /locus_tag="VE783_01680"
     CDS             complement(17409..17855)
                     /gene="trxA"
                     /locus_tag="VE783_01680"
                     /inference="COORDINATES: protein motif:HMM:NF012314.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0015036 - disulfide oxidoreductase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin"
                     /protein_id="HYX52130.1"
                     /translation="MSVVRACATCGQKNRIPTSHLADTGRCGACKSALAPVAEPLAVD
                     AAEFDEIIQNARVPVLVDFWAAWCGPCRMAAPEVSTTAANMAGKAIVLKVDTERNQQL
                     AARFRIQGIPYFAVFANGRPVIQQAGVVDHRQMEQWIMSARGASAA"
     gene            17949..>18372
                     /locus_tag="VE783_01685"
     CDS             17949..>18372
                     /locus_tag="VE783_01685"
                     /inference="COORDINATES: protein motif:HMM:NF016062.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004671 - protein C-terminal
                     S-isoprenylcysteine carboxyl O-methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006481 - C-terminal protein methylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isoprenylcysteine carboxylmethyltransferase
                     family protein"
                     /protein_id="HYX52131.1"
                     /translation="MKATDWEFSNRAMLFGLVFGLTFSLYSLDHQNATAAFANWAGAH
                     LNANIERIARVIFVLATLAMAGAALLRTWASAFLHSGIVYAAEVKSAVLVAEGPYRRV
                     RNPLYFGNIIMAVAMGKMMSRLGFLLCLPLMWLFCYRLI"
BASE COUNT         3756 a         4970 c         5642 g         4004 t
ORIGIN      
        1 atgcacttcg ttcgtcccgg actgggtgac aatgttcacc tgcccgccgg ggcgcttggc
       61 gtattcggcg ccgtaagaat cacgcagcac gttgaattcg cggaccgcat ccacgcccag
      121 cagctgcccg ctcgtgccgc cgggctgcat gttgttctcc gcggccccgg taaactccac
      181 gccattcaac tgaaacaggt tctgctgcgg ccggtttccg gagacgctga aatcgttgcc
      241 ggtggttgaa ttggaaacgc cggcgccgcc ggtcttctcc cagctaaagt tcacgatgcc
      301 cggattcagg gtcatcagca ggtcaaagct gcgtccgttc aggggcaggt ccttgacctg
      361 cctttcccca accaggccgg aaatgtcttg cgtgcttaca ttaatgatgg gcgcatcctc
      421 ctcaaccttc acctcctgcg tgacctggcc gacgcgcaga ctcaagtccg cggtggcatc
      481 ctgtcccacg gccagccgaa tgcccgagcg gaccgcctcc gcaaattttt ccctggccgc
      541 cctgacttca tacataccca ccggcagacc aacaaatctg tagcgcccgc tctggtctgt
      601 ggacgaggtg cgtgtaagtc cggtgtccag atttttggcg gtcacgtggg ctcccaccac
      661 ggcagctcca gattgatcag taatcacgcc ggaaatgtcc gccgagacct gggcggcaag
      721 cggccggaag cagagacaga cgccgaacaa caccagcacc atgaagaaac gggacgaaag
      781 cgtttttttc acagcgaggt aaaaattcaa tccggcggcg tggcgcgaaa agtcacgtgc
      841 aataggggac acttgttctc tccggggcga ttggattcaa acggacaaat cggcaagaag
      901 tgtatacgga gaacggtttt tgtgtcgaat cgttatgcga atgtaggcga gttggtcacg
      961 gattgagccg tgcacggcgt cagaagaaac ctaccgcgga ttgacgcgga tgcacgcgga
     1021 tcaaatagcc tgcgagattt ttggacgagg agcgacggtg tcctatttcg ctgttgcttc
     1081 cggagcgaaa atggtggtaa gttagcctga tttcctgacc aggtacttgg tatttggtag
     1141 ttggtagttg gtgaaaaccc taggcgcttg ggacagattg ggacgacctt gggatcaacc
     1201 gggatatccc ggtgggacga ggccgggatc aacggggacg aggccgggac ggagtgggac
     1261 gaagcagaaa atcgggtgat ctggtgaccg gaaaggcaaa tgcttcccag gaggcgccgc
     1321 cagagtggcg ggaaagatct ttgacaactc agcaatggca aatagcaatt tgcgattggc
     1381 ggcacagtcg agctgttggc agattggtaa acctggagtg gttcggcgag ggcacaaaat
     1441 attgggaagc ttcccgatat ttcggggagg gctctgggaa gctcgccggg gaggggttgg
     1501 cgagctttga gctaagtgct ttgttttcgg ggaggggtgg gggtaccccc gggggctcct
     1561 ttcatggttg atcaagtggt aatttttggg attggtggaa ggtggacgca atcgccggaa
     1621 tcccacccca gaaaaccaac accaggtttt ctgggggccc cggaatcgcg cgtaatcgcc
     1681 gtaaattgcc gtgatcgccg gaatcggaga agcaagacca tttgccgcag atgaacgctg
     1741 acaaacggaa gataaacata gatcattcca ggagattgac gccgggatag cgcgccgtaa
     1801 gtcctttaga tttggggatg atggggatga accccggggc aggagtcagg tctgaccgac
     1861 gaggtctttc tcttctgttg gagtgagcgt tgcggcggcg ggccaagtgc cggagaggca
     1921 ggccagcagg tacaggctgc ctacgatggc gaaggccgga gcgagtccgc ggcggtgggc
     1981 gatggagccg accagcatcg acaggccgag ttggagcgcg gtggcggcga agtagaaggt
     2041 gttttggacg cgtcccatga agtggcgtgg gaccatttcc atcatgccgc tggtgatggc
     2101 gacgccgccg taagcgcggc cgcagcccat gaccagataa atgaccacgg cgagcatgag
     2161 cccggcggtg accagaacgc cgaagagccg gaacggatgg tgtagatacg tgccaacgta
     2221 cggcagagag atgaggcagc agccgagcac ggccatggcg acgccgatgg cgcggcggtg
     2281 gccggtgagt cgcaggagac gcggagtgaa caaggccata ccgcaggcgc cgacggccca
     2341 tccggagttg agccagccat agccaacggc cccggctttg agcagacggt cactgaatgg
     2401 cgcggtgatg atgccctggg tgagcatgcc tcccatgaag agggcccagg cggcaccgag
     2461 gaagaaaagt cgcgggcgct ggcggatgta ggcgatgcct tcgcgcatgt catggaagaa
     2521 acgggcgact tcgctttcat ggtggactga agccggccgc gcgacgacga ctttaccttc
     2581 gcgaacgaag agataacacg agaaggagat gacgtaagac agaaagtcga tgaagagcac
     2641 gccgctcagg ccgatgtggt tgtaaacgaa gccgacgacg gctcctgcga tgagccatcc
     2701 gccctgaaag ccggcgagga tgaagctatt ggcgtgagcg aagccggatt ccggcgtgag
     2761 ttcctggatg agggcgttca tggtgggcca gaacatccag aagccggcgg ccaccaggat
     2821 actcatgagg tagacctgcc agagcgcagc tttgccgagc agagcgagca cggcgatggc
     2881 cagtacgacg aggccgcgca gggcgtcaag gagcatgaca aggtggcggc ggtcctggcg
     2941 atcgatgacc acgccgctga aaggaaggag cagcatggca gggatggttt gaagcatgag
     3001 catgaggccc agcgcggttt ccgagtgtgt ggtttggagc acaaaccagg tgacaccggc
     3061 ggagtttaac ccgctgccaa tcatagagat aaggttggcg gtgaaaacca ggcgcagccc
     3121 gcgctgctca aggatgttac gcatgtgcta ttcactttag cgcaaaggag tgtggaaatg
     3181 gtgccttgcc ggacgatggg acgagttgac ataatctcag cccgtgttta tccggcaaat
     3241 tccgggtttg accagagcgc tggtggtggc gttgggactg ggcctgagcg gcgcaaccaa
     3301 cgtgagcagc accaagccgt tcaacgcgta ccacgatggc gagaagattg tgttctctcc
     3361 ggagacgaca ggtacgcgac ggcaggcgac gttcggtccg tggaacctgg gtgagcgcct
     3421 ggcagaaggc aagcctcggg accagcgact gaatttgtac ctggtggtac cgggcgggca
     3481 gtatcgttcg gtggcgcagc cggagttcga ccacaatcgc gtggtgaaca agtacacgat
     3541 tgacggcaag ccgagggagt gggacatctt ttattgtttt gtgctggatc ccaccctgaa
     3601 aggcgacctg cgcagcgaga gcgatctgct gatggccgcg caccagacgt ttcgtccggc
     3661 ggcgctgttt gaagtgagcg atgtgcctgc cagttcggcg ctgcgcgaga agctgggggt
     3721 gagttccatg gctgatttgc ggaaatatcg gcgcaagaat ggaacgctgc ccagggcgat
     3781 cattgtgccg gcgcagctgg ccgtccgcgc aactgcggaa cagccggatg tgacgttcac
     3841 cgtgccggtt gctgccagcg catccgccac gcaggagtcg cattgatcgg cgggacgttt
     3901 atttatactt gaaccgaaaa ttcccggttt gaaggaaaaa cgccctgctc ccatttatcc
     3961 acataggccc actggacgtg cccacgtttg ggctgttcat gatcattgca tttgccgttg
     4021 cgtatctggc attggcaggc gatttgaaac ggcggcagat caagattgat ccctacaacg
     4081 tggtgctgta cgtggcgatt gccgggatta tcggcgcgaa gatctggcat gtgtttgaca
     4141 cgccggaaga ccggctgcac tggcaaattc tgggccatcc gcgcgagctg ctgaactggt
     4201 tccgcggagg ctttgcgtgg tttggcggat ttgtggcggg catcggcacg ctgctggttc
     4261 tggggcatcg ctacaagatc aacctgctgc ggatgctgga catcgcaagc ccggcagcgg
     4321 cgattggtta tgccgtggga cggattggct gcctggtatc gggcgacggc gactacggca
     4381 agcccacgaa ctgggcatgg ccgtggggca tggcgttccc gaacgggcag atgccgacga
     4441 cacagacttg tccgcaggcg attgatgcag cgcacccgaa tggctggccg gcagactgca
     4501 atgtttatcc gacgccgatt tatgagttcg tggcgggggt agcgatcttc tggtacatct
     4561 ggcggcgagg aagagccggg caaacgctgc cgccgggagt gcttacggga gagttcctga
     4621 tgctgagcgg cgcggagcga tttctgatcg agttcatccg catcaacccg cgggtgattc
     4681 ttggcatgag caacgcacaa tttacggcgt tgctttcaat gatcgctgga gcggtgctga
     4741 tgttgtgggc gagccgtgga agcgcgaggc cggtggtggc ggcggagcag ccgtagtcgc
     4801 ccaatagagt ttgttgctgc tgggcgtgtg ttgagctcgg tggactgcat gtccccttga
     4861 tgctcactga gagtcacagt agactcgcgc tactctaacc gatctgaggt acattctgcc
     4921 gtcttttgcc caaggcgatg cgtttcccgc gacgcgccat tccattgttg cggccgcaaa
     4981 gagcagcgat gcgaaagaac gcgatcgcgc ggtggaagcc attgccgccg cgtactggcg
     5041 accggtgtac aagtacattc ggctgcgctg gaacctggag cccgaagatg cgcaggacat
     5101 gacgcaggaa tttttcgcgc ggctgattga gaaggagttc ttaggcgcat acgatggccg
     5161 caaggcccgg ctccggacgt tcctaagaag ctgcattgat cacatgatga tgaaccggtc
     5221 acgcgatgcg gtgcgggaga agcgaggcgg aggcgctgcg catttgtcgc tcgatttttc
     5281 cgaggctgag catgagcttc gtggtgctgc gagcgttccc gcatccatgg acgagttctt
     5341 tgagcgcgag tgggtgcgca gcttgtttga aattgcagtt gcacggctga aggagcagtg
     5401 cacggagtca gggaagatca agcagtttgc ggtgtttgag gcttacgatc tggtggacga
     5461 agatgaaaag ccgtcctatg ccgctttggc gaagcgcttt gcgctggcgg tgactgacgt
     5521 gacgaactat ctttccttca cgcgccgcga atttcgccgc tgcgtgttgg atcaattgcg
     5581 cgccatgacc ggcagtgacg aagagttccg ccatgaagca cgcgccttgc tgggagttga
     5641 accgcgatga cgcgcctcac tgacaacgtg attgcgcggc tgcaaaccga aatggcagtc
     5701 ccggacctgg cgggaacacg ttaccagcct ataaagatgt tgggcagtgg cggcatggcc
     5761 acggtatggc tggtgcggga cacggtcctg cagcgcgaag tcgcgatgaa agtgctggcg
     5821 ccggaagcga gcggaggcga tctcgcgtcg cggctgcagc gcgaagctca actgctggcg
     5881 cgactggagc atccgggaat tgttcccgtg catgacgccg gaacattggt ggatggccgc
     5941 actttctatt gcatgaaata cgtgcaggga aggacgctgg atgaatttgt gcaggagctt
     6001 ggtctgcgtg agcgacttga acttttgcgc cggttggctg agccggtcgc ctttgctcac
     6061 gcgcgcggct ttgttcaccg cgatctcaag ccggggaaca tcatgatcgg cgctttcggc
     6121 gaagttctgg tgatggattg ggggttggcg aagtccttgc aggaacgagc cggctttgcg
     6181 gagcccgcgg gagggcaaac aattcgtgaa ttggagacgg caaagaccgc gcatggcaca
     6241 gtgctaggca ccagggggtt catgtcgccc gagcaggaga gcggagatca gcaggaggtg
     6301 gatgaacgca gcgatatttt tgcgctcggc gcaattctgc ggcttctgct tgcggatgcg
     6361 ggagaacagc cctcgcgagc gctgcgcgcc atcgcggaga aagcgatgtc tgctgacaaa
     6421 acattgcgct accgttcggt acttgagttt acggcggaca tcgggcgcta tcttctcggg
     6481 gaaccggttg ctgcttatcc agagaccttg atggaacgga gcctgcggca gttgcgcaag
     6541 catcaggttg cggtggtgct ggtattggtt tatctgctca tgaggctggc cttcattctt
     6601 ttttccaaat gacttaaaga acggctgaag cacgggtaat agaacaggca agaccaaaaa
     6661 tgaggagcta tttaatgaac aaagttttgc tgggaattgt gctgggagcc gtgctcggcg
     6721 ctgttgatgg cctgactgcg tggttcacgc ccgaggtgcg caacgcgatg gtagggatcg
     6781 taatcggctc aaccatcaaa ggcatcatcg caggtgtgtt gatcggattc ttcgccagaa
     6841 aagtaaactc gctggtgctg ggcgtgatct ttggcctggc agttggagcg ttgcttgcct
     6901 tcgggattgc tgccatgcag cacggacatt atttcgccat catgctcccg ggttccatgg
     6961 tcggattgat tgtaggttat gctacgcaac gctatggagc gcagccacag ataaccagaa
     7021 cagcgggtgc aaaagcctga tagtgcggcg accgctagcg cggcttgacc aagtcgatgg
     7081 aaagcaggtt ggccttcacg gccagattgt gcgcgcggac cggatcatta tctttcgtcg
     7141 cctggcggct ctgggcgacg taattgcgca cctgtgaaac catgttctgc tcatcggctg
     7201 agagctgtcg cttaatgctg ttgagattgt tctgagtatt ctgcaggagc tgctccgtgc
     7261 tggtctggtc gcgcgccgca tcggcggcag agagagtggg agagataggg acgggcgttg
     7321 aagtggctgc aggttgccgt gcatccgcaa cctcggtgtt gcgggttccg gatctttcca
     7381 atggtgaagg ttttttgcct ccggcgtgcg tgcctgcgtg aattcgcttc tttgcttttt
     7441 ccggaacggg tgaaggtgaa ggctgcgctt cgggagtttg ctctgcctgc tgcgcattcg
     7501 caggctcctg cggcgagggc gcaggcgtgg gctcggcggc aactggggcg gtagtagcgg
     7561 gttgctcacg cggtaccacg agcacgggct ttctgtgggc gcatccggtg gtcaggagca
     7621 caaaagccag cgaaacccag gccggcatgg agcgaagtgg catcatgctt tgctgaccga
     7681 gtcttcagat gagattcggg cttgatctcc tgaagttgta gtttcggtga gcggaaagcg
     7741 caagtagaaa gtagtaccgt gtccgggagt ggaagtgaat tcgagcgagc cgtggtgcaa
     7801 ttgcacaact cgatatgcca tggccagacc aattccgctt ccaccttttt tggtggtgaa
     7861 atagaggttg aagatcttgt cgcgaatgtc tgtgggaatg ccctggccgt aatcgcgaat
     7921 ggtaatgacc gcgctttcgg cttcacgccg caggctcaag cgcagcgtgc cgccttcggg
     7981 cattgcttgc actccattga tcacgatgtt cagcactgcc tgtttcacca gatcggagtc
     8041 aacgcgggag acaagcgggt gatcggcgtt ctgccggtcg atgctgacgt tgttctgctc
     8101 ggccgcaggt gaagcgagga tcacaacgtc ttccaccagc ttgcgcaagt cgatttcgct
     8161 gaggcgcagc tcaaccggac gcgtaaagtc aaccagggtc tgcactacgc gatcaaggcg
     8221 ctggatttca ctgccaatca cgtccatgtg gcggcgggtg tccggatcaa tctccttgag
     8281 cttctggcgc agaacttcaa ggtggaccac aatggcgttg atcgggttct tgacttcatg
     8341 cgccacgccg gaagtgaggc ggccgatggc ggccagccgg cgcgacaatt cgatttcatg
     8401 ctcgatgctg tgaacagact cggcatcccg cagcgtgagc agcgcgccaa tgcgttctcc
     8461 gcgctcttca atgaagtcaa gggtaatctg gacttcgcgg ccatgttcgt tctggatttc
     8521 cagttgattg atcggctgcc ggtcgcgaaa ggcctgcaga atattgcgcc ccactggatt
     8581 gttattgtcg aatatctctg agacgtcgca gcccagcatg gcgctgcgcg gcttgcctac
     8641 aaatcgctct acggaagcgc tgaccattac cgcgcggaag tcgctggtga acagcatgac
     8701 gccgtcctgg aggttggcca tcatctggtc caggttttct ttcagtgcgg agaatacttc
     8761 ctttacgtca cgcacttgcc ggccaagccg ctcaatcttg ctggatacag ctccaaattc
     8821 gtctgaacgg cgcagccctc cttcagccgg ttcagcttgt ccggaggcca gcaggtcgag
     8881 tcgtcgattg atagcggtca gcggtcgcag ggacaagttc gaaactgcaa ccgagatgat
     8941 gagcgcaagc acaatcgcca ggccggaggc ggcgatggcg tgccgcatgc ggtcactgat
     9001 ttcgctcttc aagtaagtcg tgattacgcc tacgcggact tctccaaagg gtgttttgtc
     9061 ctgtctttca aggggaagcc tcacctcata aattcggggc ggcccataga cagcacgaat
     9121 ctgttcccgg atgccggcgt tcaccagagc ggaaagatcg gctcggtgcg ccaccgtttt
     9181 tcccagcagg tcactattcg aatgagagag gactttccct gtactgtcag tgatggcaat
     9241 gtcgtaaatc gttggctgat cgctgatgaa ggattccagc gtggaattta cggccgagtc
     9301 ggtttccagc agttcggtca acacctcatt cacggccttg gaatcgttga gatcgatctt
     9361 ggcgtcacgc aggtcaacct ggagtgcaat cttcgcaagg ctccagacct cctgcgcggc
     9421 gactttgatg tcgccatccg tctcgcggat cttctgccgg actacttcgt aaacgtagaa
     9481 agtcgcgagc gtggccacga tcaccaccac catgaaggtg taagcaatga ccagcttcgt
     9541 ctttaagctt atcgagggca tgcccgcgaa ttaactcgcc acttctccgg cggcaccgga
     9601 cccggtgcca tactccttca atttgttgtg caaagtcttc aggctgatgc ccaggatctc
     9661 ggctgcacgg gtcttgttgt tgttggttgc cgccagcgtc cgcaggatga gggctttctc
     9721 agcctcccca actgtggtgc ccacgtcgag ccggatgctc tcgccgtcag aggccgcaac
     9781 ctttacgcca ctgctgccaa agttgggcgg aagatgccgt tgctctatgg tcttgctttc
     9841 acacacgatc acagcgcgct ccagcgtgtt gcggagttcg cgaacgtttc cgggccagtt
     9901 gtgattctgg aatagttgca tgaccgtatc gcttacgctt gccacatcgc ggccatgctt
     9961 gtgattcatg tcattcaaga gcgactccac caatatgggc aggtcctgct tgtgttcgcg
    10021 gagcggcggc atatgaatat tgaagacgtt gagccggtaa tagagatctc cccggagctc
    10081 gcctctggca actgcctcct ccgggacttt attcgtcgcg gccagaacgc ggacgtccac
    10141 cgatgtttcc accttgctgc caagtcggcg cagcttcctg tcttccaaaa cgcgtagcag
    10201 cttggcctgc gttgcggcag gcatctcgcc aatctcgtcg agcagaagcg ttccttcttc
    10261 cgcgagttcg aagcagccgg cacggcgttc cagcgcgcct gtaaacgcgc ctttctcgtg
    10321 gccgaagatt tcgctttcaa tcaatgtttc cggaattgcg gaacagttga tcgccacgaa
    10381 cggcttgttt ttgcggggac tcatttcgtg gatggtgcga gccaccatct ccttgcctgt
    10441 gccgctctcc ccggtgataa gcactgaggc ggtgctgggt gccaccatct ctatgaggcg
    10501 gaaaatctcc tgcatgggct tggaattgcc aaccatctgc ccgaagatgc cggtatcacg
    10561 gagtttgcgc ttggtcgcct ccagttccat ggaggtgccg cgctggcgcg ccgcattctg
    10621 caggatctgt ttcagtcgcg ccggatccac gggtttctgg atgaaatcat acgcgccggc
    10681 tttcatcgca tctaccgcca cgtcgatgct tccctgggca gtaaggagca ccacagcaac
    10741 cggctgcggc tggtccgcaa gacgttgcag cagttccagg ccgtccatcc ggggcatttt
    10801 gaaatccgtc accacgatac ctggaaacca ggtcgccacc ttttccagcc cttcaagtcc
    10861 atcgcgcgcg gtttccgtgc gatagcccca tgcggagatg agttccgcca ggccggttct
    10921 ttcgttctcc tcgtcctcaa caatcagaac cttttcctgt gcgttcaagc tgttcatcct
    10981 aagagagatt acaccagttc aggcttcagg caggagcact cttaacgctt tccggcggaa
    11041 aacagcgaaa acactggcca acctcagctg gtacatagcc catctccatg aaggttgcct
    11101 gttttctttt tgggcacgtt ggggcacaat tagcggatca aagtttcgtt tcggccgctt
    11161 ccgggtgctt gcaatctcag agaggtggaa tatgaaaacc tgctcgagca ttctaggctc
    11221 aatctgtatc accctggcat tcgcctcagg gccgcaagtt tcacgcgcgc aagcagcgca
    11281 acatccgctc cccaaaaaac aggttccaac acccacagtg gccactatcg atccgggaac
    11341 ccagttggtt gctgagtttg acggacctct taacgtgaca aagctgaagc cgggatcgga
    11401 agtgaaagcc gttctgaccc aggaccttat ctcacgaggg gtactcgtgg cagccgcgga
    11461 atccaagctg attggtcacg tggcagaagt atcaccgcgg caggcccaga ccggggattc
    11521 gcggctgctg gtgatttttg acaagttgaa gtcgaagaag acgaaagcgg aaattccgtt
    11581 gacggccatc gttctggcct tggcgccgcc ggcgccccga agttccatgg tggataagcc
    11641 ggaccagatg atgcctccta tgaccctttc accaggccaa tctgtgaata atcgcaccaa
    11701 cgggcgtggg tctactccca cctcctcttc tggagcaaca ctcaatagtt caactctggt
    11761 cctgctacag tcaatgaacc aaacgccagt tgttcagagt actcccggca gcgatgcaag
    11821 cgccggcatg gccagacaca atcctgctga gcagcaaaaa aaggcagctg ccatcagtag
    11881 cggtgcgggc gtgcgcggtg tgtatggcat gaagaaagta gctctgcagg gcgggactgc
    11941 cgcggttccc acgcctacag tcatcatcgg tttagattca aatctgaagc ttgaccgcgc
    12001 aacccaggtg attctgctgg taacgaatcc tctggttgca aagcagtagg actgtcactt
    12061 tccggtttta tctttcaccc aaaggcgcga tcagttccgg tcgcgctttt tcttttagag
    12121 acactcttgg cccttggtaa cttgttggtg cacaattggc atggcactct caagtagcga
    12181 gcttgcagct aaagggtttt gattcaagtg cttcggcgtc tctccatcat aatagcagcg
    12241 ctcttctggc ttgtcttctc atgtcttgta agcctgcatg cccagacgtg gcagcccctc
    12301 ggtccagaag gaggctcggt aagaagcctg gctgtgaatc caaaaaagcc tgaaagggtc
    12361 ttgctgggaa ccagcgccgg aaggatttat gcctccgatg atgggggtcg agattggacg
    12421 cgattcgccc ggctgggaaa ttctgctgag atggtcctcg atcacattgt gatcgatccg
    12481 gtaaatccaa aaatcattta cgttgcggcg tggaacgctc aggccccgaa tagcgatggc
    12541 gatgtttatt acacccgcga cgacggaaag acttgggacc tgtttgccga gatgcacggc
    12601 aaatccgtgc gggccctggc tatggcggcg agcaatccga agatactggt tgccggagcc
    12661 ctcgacggca tcttccgtac cctcaatggc ggagagactt gggagcggat ttcacctgag
    12721 catcacgccg aaatcagaaa tgtggaatca atcgccatcg atcccctgaa ttccgacgtg
    12781 atttacgccg gcacttggca ccttccctgg aagacggaag atggcggcaa gacatggcac
    12841 agcataaaaa aaggcgtgat tgacgattct gacgttttca ctatcgtgat tgatccgcag
    12901 aatacggctg tggtttacat cagcgcctgc tccggcattt atcgcagcga gaatggcggc
    12961 gaattgttcc gcaagatcca gggtatccca tattctgcgc gacgaacccg gatgctccga
    13021 atcgatccca acgagcaccg cgcggtttac gccggcacaa cggaaggttt gtggaagacc
    13081 gcggatgcgg gcgcaacatg gaagcgcatg acgggcgcga acattgtcgt gaatgacgtg
    13141 attatcgatc cgcggaaatc agaacgagtg atgctcgcta cggatcgggc tggagtgctc
    13201 gccagcgacg attctgctga aacctttgct gcgtccaatc gtggatttac tcaccgccag
    13261 gtgtctgcgt tgctggtgga tcgtcgtgat cctgcagtac tctatgccgg gctgctcaac
    13321 gataaggagt tcggcggcgt attctcgtcg cgcgacgccg ggcgttcatg gactcagctc
    13381 agtgacggat tggacggccg tgacgtcttc gtgctgcgcc gtgcggtcga tggttcgctg
    13441 gtggcgggca ccgatcgggg tatcttccag ttgaacaaag atgctccccg ctgggtgccg
    13501 ctgaacatca ctgaggaaga gatcactgcg ccaaccccgc gcggaaaggt caaagctgta
    13561 aaggccgccg gcagcgcact ggcggcccga gtcaatggtc tggaactcgt cggcaagtcg
    13621 tggttcgccg ccacatctgc cggagttttt gccagcttcg atgcgggcac gaactggcat
    13681 cgtcaggagt taccggccat taagtatgca gtgagtctcg ccgcagcaga ccgcatggtt
    13741 gtagtggcgg gacgaaatgc gatcgctgtt tccgtcaacg ccggcgaaag ctggatttcc
    13801 cccaagccgc tcgacgctga ttttgcgatc aattccgttt acgtggattc tgccggaacc
    13861 atatggctgg ctgcgcgcga aggagtgttt cgcagcagtg acgtgggcga cacctggaag
    13921 cgcgtaactt cgctgcggct ctccaacgtc actggtttgc agttcgatga agagaaccag
    13981 cgcattctcg ccactggcgc agcttccatg aacgtctttg aaagcagtga caatgggcgc
    14041 acgtggtccg cgatcaacgc gggatggctt gtccggcagg tgcaaccggc aggcggtcat
    14101 ctcgtggcgg ccacgccctt tgacggcgtt attatccagt ccgaaggcgc cactgccgcg
    14161 atccagggct ccagtaccgg caatcggtga ctccgcttgg ggtgccatct cccgcgtaaa
    14221 aagtacacgc atcgaacccg aaaactcagt ttcaaatcca gcgaaatcag cagcttagga
    14281 tggcagcgtt cttgcattcc aagtctctgg gcagtgttcc ccctctgctt ggagtctgta
    14341 tatgaaagct acaactcaag tgctgatcgc gatggttctg gctgccatgc tggctggctg
    14401 caacagtgtt gcggcgccca cggcagagaa tcccgctgcc aaagataatc ctgcttctgc
    14461 gcctgcggat tcacagcaga ccccatttgc cgagactaaa ccgctcgtta tcccggcgaa
    14521 aacccccatc tatgtccgtt tgaacgagtc gctctcaagt gctaccgcac agtcgggtca
    14581 ggtgttcagc gcgattctcg atgaaccgct tgtcctcgac ggcaaaactg ttgcggccca
    14641 gggcgcacca gttcgcggaa aagttgtagc cgcacgcgat tccggccatc tgcacaattc
    14701 cggatatctt cggattgctc tctcttccat tactgtgaat ggaaaggcca ttccagttga
    14761 gaccaacagc gtcttcgtga gcggaggcac ctacaagaag cgtaacctcg catttatcgg
    14821 cggaggcgcc gctggaggcg ctttaattgg cggtctagca ggtggaggta aaggcgctgc
    14881 tattggctcg ttgatcggcg ccggcggagg tacgggcgcc gcttacgcga ctgggaagaa
    14941 agatgtggga tttgccgctg aacggcggct cgggttccgg ctggcccagc cggtgaacat
    15001 cagttaggta ttccgcggtt aaggtagaaa ggagctgcaa gctttcgcag ctccttttct
    15061 tttgcgcttg tgtgcgcgaa tcacttcaga cccagctgcc agaacagaaa tgtccaaagg
    15121 tccaggttgt cttccaccag cttggcaatt ggttttccca cgccgtgacc cgctttggta
    15181 tccacgcgga gaagaattgg ccgatcagcg ccattagggg cgtccgcctg catcagcgcg
    15241 gccatctttt tcgcgtgcat gggatccacg cgcgtgtcgc tatctgccgt catgaagaag
    15301 gtcgcaggat agaccgtccc ttttttcacg tgttgatacg gcgagtaggc gtatatgtaa
    15361 ttgaactgcg ccggattttc cgctgaacca tactcgggaa tccatagttt ggcgatctgg
    15421 aaattctggt aacggagcat atccagcagt ggaacctggc agatcactgc gcggaataga
    15481 tcagggcgct gagtgagtgc cgcacccatc agcaggccgc cattgctgcc accctggatg
    15541 gcaagatggt ctttatctgt gtacttctct gaaatcagat actccgctgc agcaatgaag
    15601 tcatcaaaga cgttctgctt cttctcgagc atccctgccg tgtgccagtc ttcgccgaac
    15661 tcatttccac cccgaagttg cacgtcggcg taaatgccgc cgtgttccag caagacgagc
    15721 atggcgttgc gatcaaagac cggcagcctt cccacgttga accctccgta gccggagagc
    15781 agagtaggcg tcttgccatt tttggcgatc cccttgcggt tcaccaggaa catggggacg
    15841 cgcgtgccgt ccttcgaatt aaaccagacc tgctttactt cgtagcggtt cgggtccaca
    15901 ttggattcca cccccgccca aatcgaaatc ttcccatcaa agttcacctg atacaccgtg
    15961 gtgggcacgg cgaatgaggt gaagcccatg aagccttctt tactgctcca gtcgccgccg
    16021 agggcgtaga tgcttccgag cattggcatg cgcacgtcgg ccagatgctt gccatccaga
    16081 tctgcgatct tcagctccga tgcggcattg tgcgtatagc gaaggaagag gcggccaccc
    16141 gtgactggag cttcctccag caccgcctct gattgcggca cgatctcgcg ccagttctcg
    16201 cgttgcggat gcgcacaatc agctttcatt acgcggaagc ggggtgcttc atcgttggtg
    16261 acgatgtaga gctggccgtt gtaggcgtcg gcgtcataaa gaaattcttt gcccgtagtg
    16321 atcttctgta gcgcagcgct gggatcgcca aggttcttga tatacagctc agattttgcc
    16381 cagccctctt ccagctttac gatcagacac ttgccatcgt tggaaaggcg tatattgggc
    16441 cagctctgcg ggtccacaga ctcacccgca aaagggaaga gctgagggtc tttgagaccg
    16501 tcagcgtttg ccgggtcccc gaatttgtgc aagaagacgt gtcggttata catctcctgg
    16561 cctgccggaa cgtcgccggg ccggggatag cgtgtgtagt agaagcccga gttgtccggc
    16621 agccaggcca cgctcgccgc gcgcgtgcgc ccgatctttt ccggcaggtg cttgcctgta
    16681 gtagtctcca gaatctcaag cgtgctgatc tcagaaccgt tgggcgaggt gccgtacgca
    16741 aggtacttgc catcgtctga aggaaagaac caatcgaggg cgatggtccc atccggcgcc
    16801 agcgcgttca cgtcgaccag cggccggtct tttccgttca ggccttcacg gacgtagaga
    16861 acaggctggt tctgccggcc gtcgcgccgc gtatagaagt agtagttccc ggcgggccgc
    16921 ggaggatcaa cccggccaat ggtcaacagc tgttcaatgc gggagcgcaa cgcattctta
    16981 tccacgggcg tgctgtccag aacccgccgg gtatatgcgt tctgctcttc tacaaacttc
    17041 tgtgtttcag gagagccggc attctcgagc cagcgatatg ggtccgcaat cttgtggccg
    17101 tggtaatcgt cgacaaccgt ttctgttcgc gcctgaggtg gtttcataga ggattttgtg
    17161 ggtgtatcgc tcccgggtgc ggtcacgtgg ttttgagcca tggcacagat ggaaacgaaa
    17221 atgaatgtca gaccaatggc tgctcgcttc agtgttactg aaatcagatc tacatccatg
    17281 catcgcctcc cgcgggaatc atcgtaaaga aattaccaga tttgagcggg tgataataac
    17341 aaccaccgga ggggcgcttc agttgacgag tgccggcgaa gcgctgaaag aaacagtgct
    17401 gaccgatttc aggccgcaga cgccccgcgt gccgacatga tccattgttc catttgtcga
    17461 tggtcaacta ctccggcctg ctggatcacc ggtctgccat tagcgaagac ggcgaagtac
    17521 ggaatgccct ggattcgaaa tcgcgcagca agctgctggt tgcgctcggt atccaccttc
    17581 agcacgattg ctttgccggc catgtttgct gctgtggtag aaacctcagg agctgccatc
    17641 cggcacggac cgcaccacgc cgcccaaaag tccacgagta ctggaacgcg agcgttctgg
    17701 atgatctcat caaattcagc agcgtccact gcaagcggct cagcaacggg agccagtgcg
    17761 gatttacaag cgccgcagcg gccggtgtct gccaggtggg atgtgggaat gcgatttttc
    17821 tggccacagg tggcgcacgc gcggaccact gacatagctt cactccaata atctgagatg
    17881 ccgcagagca cgcaagtgtt cagcaattca gctttacaga cgcgtcgtgg ggcgttatcg
    17941 tctgccggat gaaagccacg gattgggagt tttcgaatcg cgccatgctc tttggccttg
    18001 tcttcgggct caccttctca ctctacagtc tcgatcacca gaatgcgacg gccgcgttcg
    18061 ccaactgggc tggagcacac ctgaacgcca acatagagcg gattgcgcgc gtgattttcg
    18121 ttttggcgac tctcgcgatg gcaggcgcgg ctctattgcg gacctgggct tctgcttttc
    18181 ttcattcagg aatcgtatat gccgctgaag taaagtcggc agtgctggtg gccgaggggc
    18241 cgtatcggcg cgtgagaaac cctctgtact ttgggaatat catcatggcc gtggccatgg
    18301 gcaaaatgat gagccgtctc ggctttctgc tgtgtctccc gctgatgtgg ttattttgtt
    18361 atcgattgat ct
//
LOCUS       DASQYP010000058        10169 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_1663, whole genome shotgun sequence.
ACCESSION   DASQYP010000058 DASQYP010000000
VERSION     DASQYP010000058.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 10169)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10169)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10169
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1663"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(424..1803)
                     /locus_tag="VE783_01690"
     CDS             complement(424..1803)
                     /locus_tag="VE783_01690"
                     /inference="COORDINATES: protein motif:HMM:NF039822.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5666 domain-containing protein"
                     /protein_id="HYX52132.1"
                     /translation="MLAALPGCGSGTLQPAPAPPRQPSGATTAAQLRIGDAPADRVFS
                     FEITLGSSITFNPADGGAPSVIMLNSNRLELSHTAAKLQPITLTALEPGTYSSADMII
                     QSPSITYAKQLFVPNPVTLIDRFSGNDQVLHVTFDPPIVIGSAPLLLNLDVDTADALI
                     IDGGGSIIGTNFKPASISFGTHAVGPASSQQDNDGEIEGETGKIVQASSNSFVLQTGQ
                     SGAQLLFTVDSTTELPAGVSLQNLANQIVKIEGITRSNGTLFATEVELLGDQNASQLE
                     GTIWQVGSFNNPALVAMAAQDGLGAGVTVSQLGQDFLIDISALPNSSYVVDFGNCGMG
                     ASLDPALVVDSAHLKAGQRVEVITESGVSPNQSVVPTQVRLQQQAISGNVANITPGSG
                     GASNFDVILPADSYLTLLSGESRVHVIQEARTDNRFGALNDGVPIRVRGALLWTGTQF
                     IMVARRITP"
     gene            2066..2755
                     /locus_tag="VE783_01695"
     CDS             2066..2755
                     /locus_tag="VE783_01695"
                     /inference="COORDINATES: protein motif:HMM:NF036525.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HYX52133.1"
                     /translation="MPISPAETRAAASAPSTRGRQAAQEPESRYDRQLARVLEHAAKI
                     FCDKGYEGASMRDLSRACGMSLAGLYHYFESKEELLYRIQKHAFETIIENAKSRLASA
                     SDPEERVRVFIENHLEYFLANKEAMKVLTHEDETLKNGRGAEIRAIKREYYRICFELL
                     EDLKREQGLQFPVRLAVLSLFGMVNWIYTWHNPRVDADAGALAKEMGDIFLHGLVQNG
                     NGRKKVSKSKP"
     gene            2803..3612
                     /locus_tag="VE783_01700"
     CDS             2803..3612
                     /locus_tag="VE783_01700"
                     /inference="COORDINATES: protein motif:HMM:NF012596.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase/isomerase family protein"
                     /protein_id="HYX52134.1"
                     /translation="MATTTATETKTLVNYRVEDGVAVIELFDPPANTYTYEMNRQLDD
                     CILKARMDNNVYVIVLTGNGDKFFSAGANIKMLSSVDPTFKYYFCLHANETLLRLEHT
                     PKLVIAAINGHCVGGGLEIAMACDLRIARRDAGKIGLPEINLGVLPGTGGTQRLSRLV
                     GKSKAIELMVTGNTFTFEEAKELGVINDIYERENFMENIMEYARQFTPPNKAAKAVGN
                     IKRSVQTGWEIPLESALAVERELQQRLFSSEDAKEGLAAYVDKRPATFTAK"
     gene            3736..5202
                     /locus_tag="VE783_01705"
     CDS             3736..5202
                     /locus_tag="VE783_01705"
                     /inference="COORDINATES: protein motif:HMM:NF012398.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HYX52135.1"
                     /translation="MLTATKAKVAPGKLLINGQWGEGSGKAFDTVNPATGEVLTQIAE
                     ASAQDIDLAVTAARKAFDDAAGPWRKMSASDRGKILWKIAELIEKNIDELAELETLDN
                     GKPIFESRYVDMPMVADVFRYYAGWATKIHGETVNSFSNAFTYTLREPVGVVGAIVAW
                     NFPLLLASWKLGPALACGNTVVLKPAEDTPLTALRFGELCLEAGLPAGVLNIVTGGPA
                     TGQALVKHPGVDKVAFTGSTSVGKEIMRASADTLKRVTLELGGKSPNIVFSDSQMDAA
                     VKGAVNGIFYGKGEVCCAGSRLFVEKKVEDEFVTKLVEYCKKIKLGDPLDPKTRLGAI
                     VSQKQMDTVMSYIEAGKKEGATILTGGKRASVNGDHGFFLEPTVFGGVKNDMKIAQEE
                     IFGPVLATLTFDDVEEVAELANRNVYGLAAAVWTNDLKKAHQMSRRLKAGTVWINTYG
                     LMDASLPFGGYKQSGFGRELGMHAIEHYTELKTVWMNL"
     gene            5328..6509
                     /locus_tag="VE783_01710"
     CDS             5328..6509
                     /locus_tag="VE783_01710"
                     /inference="COORDINATES: protein motif:HMM:NF016993.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0010124 - phenylacetate catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Phenylacetic acid catabolic protein"
                     /protein_id="HYX52136.1"
                     /translation="MPGKVPKIGTFSDWVGLFNEWRKEVGVDHDNIKAFKFDTLYGAI
                     ETDEITFGYYKGRNKWENMRQIPTQNMRDALMNLIVYQGDTEFASVEQQRYLFESAPT
                     DWDRSALTRVMIEEMRHGWQMCALLIDFFGDTGKVEARKMLERRAYENKRLLGSFNEE
                     CDNWLDFFAFTDFVDRDGKFQLQMLKYSAFAPLGRSMSYMLREEAFHMGTGNTGLARI
                     AEAGVVPHWLLQKYLNKWISSSYDLFGTDHSSSAHWAYTWGLKGRYDEPKNPNPPNME
                     ELNDYNRHLYRDECATLVKRISAAQKPGNDPLYCPDIRFNRNIGKWKGQFFHPETGQQ
                     IEEKEYREQFDTWMPTEADKKLLKDIIAAEKKWIAPRAGAKDPLLTIGEVRKNAINAS
                     V"
     gene            complement(6585..7001)
                     /locus_tag="VE783_01715"
     CDS             complement(6585..7001)
                     /locus_tag="VE783_01715"
                     /inference="COORDINATES: protein motif:HMM:NF027967.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fibronectin type III domain-containing protein"
                     /protein_id="HYX52137.1"
                     /translation="MKFLFVLVATLLLCLCIGVAQTPAAPAANQAANPPEVTHGPVLE
                     YVTDHDAVIAWTTKQPYDMQIHYGTSPTSLTQASEVRENGKGTNHRVQLNNLQPSTTY
                     YIQMTNNTGGAIGSVVQFQTTAKGAAPQRQNVDLGK"
     gene            7355..8110
                     /locus_tag="VE783_01720"
     CDS             7355..8110
                     /locus_tag="VE783_01720"
                     /EC_number="2.8.3.-"
                     /inference="COORDINATES: protein motif:HMM:NF013323.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008410 - CoA-transferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA-transferase"
                     /protein_id="HYX52138.1"
                     /translation="MSYTLNELMVVAAAREIKDAEIVFVGMRLPLISFVVAKKTHAPN
                     AIGLFENGVIRSTPSPELIYTMADPPNIKGATQCVDMLSVMGLLQSGRVSLGFLGAAE
                     VDRFGNLNSTQVQGKNGLVRLPGSGGASDIASMAQRFVALLEHSRHRLPERVAYITSP
                     GNGEGNGWRRKVGLPRGGPSAVITSKCVLRFREDSGEAYLATYHPGVAVEDVRVNTGW
                     ELKVAEDVKPTPEPTAAELQAIREYDTKGFWTS"
     gene            8145..8534
                     /locus_tag="VE783_01725"
     CDS             8145..8534
                     /locus_tag="VE783_01725"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HYX52139.1"
                     /translation="MGNPEKRVIGVGGIFFKAKDPVAMYAWYEKHLGIKGKPGQGSMF
                     PWRRADDPTQQSMTVWSVFPAHTKYFEPSDSSFMINYLVEDLPAVLEALRAEGVTIEK
                     SEEHEYGRFAWIIDPEGNKIELWEPAK"
     gene            8609..9370
                     /locus_tag="VE783_01730"
     CDS             8609..9370
                     /locus_tag="VE783_01730"
                     /inference="COORDINATES: protein motif:HMM:NF012596.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase-related protein"
                     /protein_id="HYX52140.1"
                     /translation="MNRVRVEQHGPLARIVFTHPPLNVFGFELMDECSEALNRVEAQP
                     QVVAVIISGEGKAFSAGVDVAVHTPDNIQTMFQKFHGLVMKLVKYPKITIAKVHGACL
                     GGGAELAMVCDMCFTTPDAKWGFPEITLGCYPPVACTALAALVGQKLAADLIFTGRTF
                     SGEVAVAWELANAAQTEERLEAEIQSRLDHVVKLSPAALAYAKKAFYAWDSIHLDKGL
                     ARAEKIYTEELMKTEDATEGVKAWMEKRKPMWKGR"
     gene            complement(9487..>10169)
                     /locus_tag="VE783_01735"
     CDS             complement(9487..>10169)
                     /locus_tag="VE783_01735"
                     /EC_number="3.4.13.-"
                     /inference="COORDINATES: protein motif:HMM:NF013413.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0070573 - metallodipeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="membrane dipeptidase"
                     /protein_id="HYX52141.1"
                     /translation="KTDLRRFLSTRMPGQVAGLLGSEGSQPLEGKLENLDDLFNAGIR
                     MMAPTHFTDTAVGGAAAGMNKGGLTDLGRQWVHELEHRGIIVDLAHASPATLRDVTSI
                     ATRPLFVSHTGLKGTCNNPRNLSDDELRMVAKTGGVIGIGLWDTATCGTDAHATARAI
                     RYAVGIVGVDHVGLGSDFDGAVTTPFDASGWVLVTDALLQEGFSEQDIHKIMGENVVR
                     VLLDVLPE"
BASE COUNT         2320 a         2698 c         3109 g         2042 t
ORIGIN      
        1 gcaaacaatt taccagtgtt gctaaacatt ttagaatctc cttctcgcag gactttcttt
       61 ttcagaattt tggtttcgat cattaagccc gggggcatcc agagtgggct cctgagcgag
      121 gcaggttttc caggctcaca agcgttggtc ctgtttgggg gctggctcca ggacggcaac
      181 tcctccgtca taaacaactg ctgaacttca taagtgctgt tctacggata ctctggttgg
      241 taagacacgc tccatccaga tctggaacag cttttttgtt tttcctgagt aaatcccggt
      301 tttctatgaa gtggcggccg gcgaggagcg ttgatataag cggaataccg gagacgaagc
      361 ccgcttcgac gcagcaaaca acttcgcgga gtgtgctgcg aagaagaagg cagggggatg
      421 gggttacgga gtgatgcgtc gcgcgaccat gatgaactgc gtgcctgtcc acagcagcgc
      481 tccgcgcacc cggattggca cgccgtcgtt gagggcgccg aagcgattgt ccgtgcgcgc
      541 ttcctggatt acatgcacgc gggattcgcc ggagagcagc gtaaggtagg aatcggcggg
      601 cagaatgacg tcaaaatttg aagctccccc cgaccccgga gtgatatttg caacgtttcc
      661 gctgatcgcc tgctgctgca acctgacctg ggttggaaca accgactggt tcgggctaac
      721 gcccgattcg gtgatgactt ccacacgctg gccggctttg agatgggcgg agtcaacaac
      781 cagtgccggg tcgaggctgg cccccattcc gcagttcccg aagtccacga catacgaaga
      841 gttggggagg gctgagatgt caatcaggaa gtcctgccca agttgcgaca cagttacccc
      901 agcgcccagc ccgtcctggg cagccatggc cacgagcgcc ggattgttaa agctaccgac
      961 ctgccagatg gttccttcga gttgagaggc gttctggtcc cccaacagtt cgacttcggt
     1021 cgcaaacagc gtaccgttgg agcgcgtaat gccttcaatc ttcacaatct ggttcgccag
     1081 attctgcagg ctgacaccgg ctggcagttc ggtagtggaa tccacggtga agagaagttg
     1141 tgccccgctc tggccggttt gcagcacaaa gctgttgctc gacgcctgga cgatcttgcc
     1201 ggtttcgcct tcgatctcgc cgtcattatc ttgctggctg ctcgccggcc ctaccgcgtg
     1261 agtgccgaaa ctgatggagg ccggcttgaa gttggtccca atgatacttc ctccgccgtc
     1321 gatgatgagc gcgtctgcag tgtcaacgtc caggttcagg agaagcgggg ctgagccgat
     1381 cacaatcggc ggatcaaaag tcacgtgcag gacctgatcg ttcccggaga aacgatcaat
     1441 cagggtcacc ggattcggca cgaacaattg cttcgcgtag gtgattgaag gcgactgaat
     1501 gatcatgtcg gccgaagagt aagttcccgg ctccagcgcc gtgagcgtga tcggttgcag
     1561 cttcgctgcg gtgtggctga gttccaggcg gttggaattc agcatgatca ccgaaggtgc
     1621 gccgccatcg gcggggttaa aggtgatcga actgccgaga gtgatttcaa aagagaagac
     1681 ccggtcggcg ggcgcatcgc caatgcgaag ctgggcggca gtggtggcac cactcggttg
     1741 tcgaggtggc gcgggcgcag gctgcagggt tcccgaaccg catcctggca gagcggcaag
     1801 cacgaggctg tatgcaatta tttgcaactt tcgtggtaag tgaagtttac tcatcctgcc
     1861 acctcgaccg ggagaagccg cgcaagtgct tgaaatcagg tcccatccca cccactgggt
     1921 gttcattgcc tcaaggccgc acatgcgcgc ggtgatatga atgcgcaatt ttttacccaa
     1981 tgggccggcg cgagttgtgg aatttgacgc agaggcaacc cacgcgagat aattagagtc
     2041 gaacgaacgt tcggtaaccg tcctcatgcc gatttccccc gctgaaacac gtgccgctgc
     2101 ttctgcgcct tccacgcgag gacggcaggc cgcccaggaa ccggaatcca gatatgaccg
     2161 ccaattggcc cgggtcctgg agcatgccgc gaagattttc tgcgacaaag gatatgaggg
     2221 cgcatccatg cgcgatttgt cgcgggcctg cggcatgtca ctggcggggc tatatcacta
     2281 cttcgagtcg aaagaagaac tgctctaccg gattcagaag catgcctttg agacgatcat
     2341 cgagaatgcg aagtcgcggc tggcgagcgc gagcgatcct gaagagcgcg ttcgcgtctt
     2401 catcgaaaac catctggaat atttcctggc caacaaagag gccatgaagg tcctcaccca
     2461 tgaggatgag acgctgaaga acggccgcgg ggcggagatc cgggcgatta agcgcgagta
     2521 ttaccgcatc tgttttgagc tgctggaaga cctgaagcgc gagcagggac tacaatttcc
     2581 tgttcgcctg gccgtgctga gcctgtttgg catggtgaac tggatttaca cctggcacaa
     2641 cccgcgcgtg gatgccgatg ccggtgcgct ggcaaaggag atgggcgaca tctttctgca
     2701 cgggctggtg cagaacggca acggccgcaa aaaagtttcg aaatcaaagc cctgaagata
     2761 tctcaactga tcaagccgga ctaatgaagg agcgaatgca acatggccac aaccacagca
     2821 actgaaacca aaaccctggt gaattaccgt gttgaagacg gcgtggccgt catcgaattg
     2881 tttgatccgc ctgccaacac ctacacctat gaaatgaacc gccagctcga tgactgcatt
     2941 ctgaaggcgc gcatggacaa caacgtctat gtgatcgtgc tgaccggtaa tggcgacaag
     3001 ttcttttccg ctggcgccaa tatcaagatg ctttccagcg tggatcccac gttcaaatac
     3061 tacttctgcc tgcatgccaa cgaaacactt ctgcggctgg aacacacgcc caagctggtg
     3121 attgcagcga tcaacggcca ttgcgtgggc ggcggactgg aaatcgccat ggcatgcgac
     3181 ctgcgcattg cccgccgcga tgccggcaag atcggtctgc cggaaatcaa ccttggcgtg
     3241 ctccccggaa ccggcggaac acagcgcctg agccgtctgg taggcaagag caaagccatt
     3301 gaactgatgg ttaccggcaa caccttcacc tttgaagagg caaaggagct cggagtcatc
     3361 aatgacatct atgagcgcga gaacttcatg gaaaacatca tggagtatgc gcgccagttc
     3421 actccaccca acaaggccgc caaggccgtt ggcaacatca agcgctccgt gcagaccggc
     3481 tgggaaattc cgctcgagtc cgcgctggcg gtggaacgcg aacttcagca gcgcctgttc
     3541 tcgagcgaag acgccaaaga aggtctggcg gcttacgtag acaagcgtcc agcgacgttt
     3601 acggcgaaat agcgacgagc tgctagcttc cagcggctag caaccaactt gcctttgtcc
     3661 gaggcgtggg gaactacgcc tcgggctgcg tctaaacagg ctaacagcca acagctagca
     3721 gccaggagct tgttcatgct tacagctacc aaagcaaaag ttgcacccgg aaaactgctg
     3781 atcaacggcc agtggggtga gggttcaggc aaggcattcg acactgtgaa tcccgccacc
     3841 ggcgaggtgc tgacgcagat tgctgaagcc agtgcacagg acatagatct ggcagtgacg
     3901 gcggcgcgca aggcgtttga tgacgctgca ggtccatggc gcaagatgtc ggccagcgat
     3961 cgcggcaaga ttctgtggaa gattgcagag ctaatcgaaa agaacatcga cgagctcgcc
     4021 gaactggaaa cgctggataa cggaaagccg atcttcgaat cgcgctatgt ggacatgccc
     4081 atggtggcgg atgtgtttcg ctactacgcc ggatgggcga ccaagatcca cggtgagacg
     4141 gtgaactcct tcagcaatgc gtttacttac actctgcgcg agcccgttgg ggttgtgggc
     4201 gcgattgtcg catggaattt cccgctgctg ctggcgagct ggaagcttgg tccggcgctg
     4261 gcctgcggga acacagttgt gctgaagccg gcggaagaca cgccgctgac cgcactgcgt
     4321 ttcggtgagc tctgccttga agccggattg ccggcaggcg tgctcaacat tgttacaggc
     4381 ggccctgcta cggggcaggc gctggtgaag catcccggag tcgataaggt cgcctttacg
     4441 ggatcgacct cggtgggtaa ggaaataatg cgtgcttcgg cagacacgct gaagcgagtg
     4501 acgctcgaac taggcggcaa gtcgccgaac atcgttttct ctgattcgca gatggatgcc
     4561 gccgtcaaag gcgcggtcaa tggcatcttc tatggcaaag gcgaggtctg ctgcgcgggc
     4621 tcgcggttgt tcgtcgaaaa gaaagtggaa gacgagttcg tgaccaagct ggtggagtac
     4681 tgcaaaaaga tcaagctggg cgaccctctt gatccaaaga cccgcctggg cgcaattgtg
     4741 agccagaagc agatggacac cgtgatgagc tacatcgaag cgggtaagaa ggaaggcgcc
     4801 acgatcctca ccggcggcaa acgcgcttca gtcaacggcg accacggttt cttcctggag
     4861 ccaacggtgt tcggcggcgt gaagaacgac atgaagatcg cgcaggaaga gatcttcggt
     4921 ccggtgctgg ccactctgac gtttgacgac gttgaagaag tagccgaact ggccaaccgc
     4981 aatgtctatg gtctggctgc cgcggtctgg accaatgatt tgaagaaagc acaccagatg
     5041 tcccgccgtc tgaaagccgg aacggtatgg atcaacacgt acgggttaat ggacgcgtcc
     5101 ctgcccttcg gagggtataa gcagtcagga tttgggcgcg agctgggaat gcacgcgatt
     5161 gagcattaca cggaactgaa aacagtttgg atgaatctat aaagaagcag ttagcaatca
     5221 gcaattagta attagccatt agccagaccg tgaagtccca agatgctggg ctaaaggcca
     5281 acggccaaag gctaattgcc aattgctaaa ttgctacgga gttttacatg cctggtaaag
     5341 taccgaaaat cggaacgttc agtgactggg tcggcctgtt caatgagtgg cgcaaggaag
     5401 tgggcgtcga ccacgacaat ataaaagctt tcaagtttga cacgctctac ggcgcaatcg
     5461 aaaccgatga gatcacgttc ggatattaca aaggccgcaa caagtgggaa aacatgcgcc
     5521 agattcccac gcagaacatg cgcgacgccc tgatgaacct gatcgtttac cagggcgaca
     5581 ccgagttcgc cagcgtggag cagcagcgct acctgtttga gagcgcgccc accgactggg
     5641 accgcagcgc cctgacccgc gtgatgatcg aggaaatgcg ccacggctgg cagatgtgcg
     5701 cgttattgat agacttcttc ggcgataccg gcaaggttga ggcgcggaag atgctcgaac
     5761 gtcgcgccta cgaaaacaag cgcctgctgg gcagcttcaa tgaagagtgc gacaactggc
     5821 tggacttctt cgccttcact gactttgttg accgtgacgg caagttccag ttgcagatgc
     5881 tcaaatattc ggcattcgcg ccgctgggcc gctccatgag ttatatgctg cgcgaagagg
     5941 ccttccacat gggcaccggc aacaccggac tggcgcgcat tgcggaggcc ggcgtggttc
     6001 cacactggct cctgcagaaa tacctgaata agtggatttc cagctcgtat gacctgttcg
     6061 gcacagatca ctcatcctcg gcgcactggg catatacctg gggactgaag ggccgctatg
     6121 acgagccgaa aaatcccaat ccgccgaaca tggaggagct gaacgactac aaccggcact
     6181 tgtatcgcga cgaatgcgcc acgctggtca agcgcatcag cgccgcgcag aagcccggca
     6241 acgatccgct ttactgcccg gatatcaggt tcaaccgcaa catcggaaaa tggaaggggc
     6301 agttcttcca tccggaaacc ggccagcaga ttgaggagaa ggagtatcgc gagcagttcg
     6361 acacctggat gccgaccgag gcagacaaga agctgctcaa ggacatcatt gccgcggaaa
     6421 agaaatggat tgcgccacgt gcaggagcaa aggacccatt gcttacgatc ggcgaggtaa
     6481 ggaaaaacgc catcaacgcg agcgtataac gctgagatgg ggaaaaagtc agggctgcta
     6541 cggcatgctg ccacggcagc cctgttttta tgcctaccag cagtttattt tcccagatcg
     6601 acgttttgcc gctgcggagc tgcccctttg gccgtggtct ggaactgcac cactgaaccg
     6661 atcgctccac cggtgttgtt cgtcatttgg atgtaatagg tcgtgctcgg ctggagattg
     6721 ttgagctgca cccggtgatt ggtgcccttg ccgttctccc gaacttcaga tgcctgcgta
     6781 aggctggtgg ggctggtgcc gtaatggatc tgcatgtcat acggctgttt ggttgtccat
     6841 gcaattaccg catcgtgatc ggtaacgtac tcaagcaccg gtccatgtgt tacttccggc
     6901 gggttggccg cctggttggc tgcaggagcg gcaggagtct gagctacacc gatgcacagg
     6961 caaagcagca gagtggctac caaaacaaat aagaatttca tacgagtctc cctaggtgac
     7021 agttgacgag tggcctattc ttgcgaagcg tagcgggcag agaaggttgt cttggcgaat
     7081 cggcagaccg gattcgggag atcgggtggg gagatcggga aacagagtct cacgataagg
     7141 agaaggagca gagctggaag cctggggagc aaagaaccgg cgagagtgga tgatgttatc
     7201 tcagcgtggt cattcgcggg tgatgggtaa gcgcaggtgc gctgcgcata gttcgtcgtg
     7261 tgcggcagag cagcgtacct gcacgcgggt ttctcgttac aattcatggt tccatcttcg
     7321 gcttgggatt cggaatactc ggaattgaga acagatgtcc tataccctca acgaacttat
     7381 ggttgtggct gcggcgcgcg agatcaaaga cgccgagatc gtcttcgtcg gcatgcggct
     7441 gccgctgatc tcctttgtag tggcgaagaa gacccacgcc ccgaatgcga ttggtctgtt
     7501 tgaaaatggc gttatccgga gtacgccctc gcctgagctg atctacacca tggcagaccc
     7561 gcccaatatc aaaggagcca cgcaatgcgt ggacatgctg agcgtgatgg ggctgctgca
     7621 gtccgggcgg gtgagcctgg gtttccttgg cgcggcggag gtggaccgct tcggcaacct
     7681 gaactccacg caagtgcagg gaaaaaatgg gttggtccgg ttgccgggat cgggcggcgc
     7741 cagtgacatt gcttccatgg cgcagcggtt cgtggcattg ctggaacact cgcggcatcg
     7801 cctgccggaa cgcgtggcct acatcaccag ccccgggaac ggagagggta atggctggcg
     7861 caggaaagtc ggcctgccac gcggcggacc ttcggcggta atcaccagca aatgtgtgct
     7921 gcggtttcgg gaggattcag gggaagccta tcttgccacg taccatccgg gtgttgccgt
     7981 ggaagatgtt cgtgtgaata ccggctggga gctgaaggta gctgaggacg tgaagccaac
     8041 accggagccg actgcggccg agttgcaggc aatacgcgag tacgatacca aggggttctg
     8101 gaccagctga ggaatcgccg aaatcggcag aaatcggagg caaaatgggc aatcccgaga
     8161 agagagtcat aggtgttgga ggtatctttt tcaaagctaa agatcccgtt gcaatgtatg
     8221 cctggtatga gaagcatctc gggattaagg gcaagcccgg ccagggcagc atgttcccct
     8281 ggcgacgggc tgacgatccg acgcagcaaa gcatgaccgt ttggtccgtc tttcctgccc
     8341 acaccaaata tttcgaaccg agtgattcct cattcatgat caactacctg gtggaagacc
     8401 ttcccgcggt tctggaagcg ctacgcgctg agggggtgac catcgaaaag agcgaggagc
     8461 atgaatatgg gcggtttgcc tggatcattg atcctgaagg gaacaagatt gagctctggg
     8521 aaccggcgaa gtgaagtgta agaatgcgtg gtcgcagtga aggcatcacc aaagggatac
     8581 ggaggcacgg agaagctgcc cctttgctat gaatagagtc cgagttgaac agcacgggcc
     8641 acttgcccgg atcgtcttta ctcacccgcc actgaatgtc tttggcttcg agttgatgga
     8701 cgaatgctca gaagccctca acagagttga agctcaaccg caagtggtgg cggtgatcat
     8761 ctccggcgag ggaaaggcct tttctgccgg cgttgatgtg gcggtgcata cgccggacaa
     8821 cattcaaacc atgttccaga agttccatgg gttggtcatg aagctggtga agtacccaaa
     8881 aattaccatc gccaaagttc atggggcgtg tttggggggc ggcgccgaac tggctatggt
     8941 ctgcgacatg tgcttcacca cgccggatgc gaaatgggga ttcccggaaa ttacgctggg
     9001 atgctatccg ccagtagcat gcacagcgct ggcggcgctg gtgggccaga agctggccgc
     9061 cgaccttatc ttcaccgggc ggactttttc gggcgaagtt gcggtcgcct gggaattggc
     9121 caatgcggcg cagacggagg agcggctaga ggcggaaatc cagagccggc tcgatcatgt
     9181 cgtcaagctc agtccggcgg cgctggccta cgcgaagaag gccttctacg catgggactc
     9241 tattcacctg gataaaggcc tggcgcgtgc ggagaaaatc tacacggaag agttgatgaa
     9301 gaccgaagac gctactgagg gtgtaaaggc gtggatggag aaacggaagc cgatgtggaa
     9361 aggacgataa actccttcgc cgcagatttc cgcagatgaa cgcagatcag atagccgcga
     9421 ataaatgcga atttggcaaa gaatggaacc gcctacgctt caatgtcccc gaggtgagag
     9481 gctggtttac tccggcagca cgtcgagcag aacccgcacc acgttctcgc ccatgatctt
     9541 gtggatgtcc tgctcggaaa agccttcctg aagcagcgca tcggtcacta gcacccagcc
     9601 gctggcgtca aatggagtgg taacggctcc gtcgaagtcg gagccaaggc cgacgtgatc
     9661 gacgccgacg attcccaccg catatctgat ggctcgcgcg gtggcatggg cgtcggtgcc
     9721 gcaggtggcg gtgtcccaga gcccgattcc gatcaccccg ccggtcttcg cgaccatacg
     9781 cagttcgtca tcagaaagat tgcgcggatt attgcaagtt cctttcaggc cggtgtgcga
     9841 cacgaataga ggccgggtgg caatcgaagt tacgtcgcgc agcgtagctg gggaggcatg
     9901 cgccagatcg acgatgatgc ctcggtgctc gagttcgtgt acccattgcc tgccgagatc
     9961 ggtgagacct cctttgttca tgcctgcagc tgcgccgccc actgccgtgt cagtgaagtg
    10021 ggtaggcgcc atcatacgga taccggcatt gaagagatca tccaggttct ccagcttccc
    10081 ctccaacggt tgggaacctt ctgatccgag aagtccggca acctgccccg gcatgcgcgt
    10141 gctgaggaag cggcgcagat cagtcttgc
//
LOCUS       DASQYP010000059         6277 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_1667, whole genome shotgun sequence.
ACCESSION   DASQYP010000059 DASQYP010000000
VERSION     DASQYP010000059.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 6277)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6277)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6277
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1667"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            114..1589
                     /locus_tag="VE783_01740"
     CDS             114..1589
                     /locus_tag="VE783_01740"
                     /EC_number="3.4.13.19"
                     /inference="COORDINATES: protein motif:HMM:NF013413.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0070573 - metallodipeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dipeptidase"
                     /protein_id="HYX52142.1"
                     /translation="MKPSRLLLSLVLIANLAVAQPTQHKKSAPASAKKSGMAKPASAA
                     AVHQSAIVVDTHADTPQRFLDENFDLAQNTPVSEGHMDFDKIKKGNLGAEFFSIWVEP
                     SFKGHYAKRAMDLIDSVYQQAARHPDKMTMAFTADDIAKAHEQHKFAALMGIEGGHAI
                     ENDIRLLRDFYRLGVRYMTLTWSNTNEWADSSGDIQDPNVKHHNGMTDFGKDVVREMN
                     RLGMMVDVSHVSDATFFQALLISQAPVIASHSSSRALTPHPRNMTDEMLRAVALNDGV
                     VMVNFYSAFIDADYLKASTDPEKVKERDQMIASYEKEHAHPDGTPLTYNEEVELEKRW
                     AAQFPRPPFKSLIDHIDHIAKVAGIDHVGLGSDFDGVTSLPQGIDSVADLPKITEALM
                     QRGYSEADVRKILGGNILRVMRQVEETAKRIQSERKESDALSVEDIDLMLGNRVTPAH
                     LVEIIRQHGVNFDLTPERRTRFKNENADEAVLTAIIKSRRR"
     gene            complement(1638..2477)
                     /locus_tag="VE783_01745"
     CDS             complement(1638..2477)
                     /locus_tag="VE783_01745"
                     /inference="COORDINATES: protein motif:HMM:NF024743.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4097 family beta strand repeat-containing
                     protein"
                     /protein_id="HYX52143.1"
                     /translation="MNRNQHMFLPTILFTVVLGCSGFGQGAPDGRVVAKIADPSRPAS
                     VSVHIIQGNITVQGGNAQDVTVEARLRDDHEERRSDRNAAGMKRIPMTSSGLNVEAEN
                     NQVRITTDQTQRTVDLTITVPVRSSLSLKTINDGNIVVTGVDGELDVNDINGNVTLKN
                     VSGSVVAHALNGNVVVTMNRADAKPMAFSSLNGNIDVTFPADLKATVSMRTDNGEVYS
                     DFDVQLDTTAPRQIVEDGRSSGGKYRVRMDKTVRGKIGGGGPEIQFKNFNGNIYIRKA
                     GAK"
     gene            complement(2482..3609)
                     /locus_tag="VE783_01750"
     CDS             complement(2482..3609)
                     /locus_tag="VE783_01750"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52144.1"
                     /translation="MLKNRLVVAAVIVAGVVAFAGTRFSSTVKAANHLSFQRVHEAPE
                     RQDKDRQNKDQQDKDFDHENEPQVEADLNEGPEIETPDVDDHEGPAMDGADHDSEPAD
                     MDDDRDDDDSAMSLKEQETIRKTFTLSAAHKTLEIDNVQGSIEVVASNSDQVQMVVNK
                     TLRAESKERMEAAKKEVKLDITEQPDLLKLYVDGPFRCNCNNGCDGWHGDRGYSVKMD
                     FQLQVPRNLDLKLKTVNAGKVFVRGTAGNFSVHNVNGPLEMQDVAGSGQARTVNGGVK
                     VTFRENPKEKSDFGTINGNVELGFVRPLSADFRFKTMNGGVFSDFEMTALPSQPVSAE
                     RHNGRFVYRSDRFTGGRVGSGGPEIKAENLNGEIRILERHE"
     gene            complement(3653..4462)
                     /locus_tag="VE783_01755"
     CDS             complement(3653..4462)
                     /locus_tag="VE783_01755"
                     /inference="COORDINATES: protein motif:HMM:NF025030.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HEAT repeat domain-containing protein"
                     /protein_id="HYX52145.1"
                     /translation="MTCESMAELLADYLQGRLQPQQAEKLEEHLRQCAECRADAVMWQ
                     ALGSIPGQQPSPAMKSRFNAMLESYQEGRWEKANLKQEHGRFLDFGAIVQWARTPAVS
                     VAASFVLVLCGFLAGRYVDRPQPAAVQGVAEMRQELASMRQLVVVSMLKQQSASERLQ
                     GVSYSLAQNEADPRILEALLHTLRYDNSVDVRLAALDALGHFSSHQDVRKGLIDSLGT
                     QQSPLVQVALIDVLVDMRDRSAVEQLKKLQQEPGLDPSVKKRADWGIQQLS"
     gene            complement(4459..5061)
                     /locus_tag="VE783_01760"
     CDS             complement(4459..5061)
                     /locus_tag="VE783_01760"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor"
                     /protein_id="HYX52146.1"
                     /translation="MTQTISDEQLMSQVRSGVGESLGVLFERYQAPLLNFYYKLTGDR
                     GLSEDLVQEVFFRILKYRHSYRPETGFRAWMYQIARNTRVDHWRRQKPETSWEPEMSP
                     PVMPKDMADQAQQHELLHVALMELAEEKREVLVLSRFQDLKYEEIAALLGCEVNTVKV
                     KVFRALRELREIFEALESGKLVRKQGFKGAGMRPGSGSVQ"
     gene            5236..5970
                     /locus_tag="VE783_01765"
     CDS             5236..5970
                     /locus_tag="VE783_01765"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: protein motif:HMM:NF012387.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA];
                     GO_function: GO:0016018 - cyclosporin A binding [Evidence
                     IEA];
                     GO_process: GO:0000413 - protein peptidyl-prolyl
                     isomerization [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HYX52147.1"
                     /translation="MLRVAVMVLCLGIAGAAQSGAQKPADTKKSTAAPKSGTAAHEPT
                     AIIHTTAGDLKCELFPDKAPKTVANFIGLAKGTKDWKNPSTGQMEHGKPLYDGVIFHR
                     TIPGFVIQAGDPTGSGSGDIGFTFEDEPSDLLYDRPGRLAMANRGPSTNSSQFFITES
                     PLPALNPQPPRVYTIFGQCDDPSMELVKKIARMPCQGGGTCTSNNSRPENPVKITHID
                     IQNAPGAKSSASADKAAKTTKSSTKK"
     gene            5988..>6277
                     /locus_tag="VE783_01770"
     CDS             5988..>6277
                     /locus_tag="VE783_01770"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016634893.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA];
                     GO_process: GO:0000413 - protein peptidyl-prolyl
                     isomerization [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HYX52148.1"
                     /translation="MARAAGTYATFDTTEGKIVCRLFEKEAPVTTKNFIDLAEGKRSW
                     KDRVSGKGGDGPLYSGTIFHRVIPDFMIQGGDPSGTGMGGPGYKFEDETKGSP"
BASE COUNT         1342 a         1896 c         1648 g         1391 t
ORIGIN      
        1 aacctgattg aagctgcgga agagcgccgg caggcctgct tccacgtgat gatttccgat
       61 cgctacaccg aatggcgtga agcgaaccag gtggctgata aaattgcggc tgaatgaagc
      121 cgagccgact ccttcttagc cttgttctca tcgcgaacct tgcagtagct caacccacgc
      181 agcataaaaa atctgcgcct gcttcggcga agaagtccgg catggccaag ccggcttcgg
      241 cggcagctgt ccatcaatcc gcaattgtcg tcgatacgca tgcggacacg ccgcaacgct
      301 ttctcgatga gaatttcgac cttgcccaga acacgcccgt ttctgaaggg cacatggatt
      361 tcgacaagat caaaaaaggg aatctgggcg ccgagttttt ctccatctgg gttgaaccgt
      421 cattcaaagg tcattatgcc aaacgcgcca tggacctgat tgacagcgtc taccaacagg
      481 ccgcgcgaca tccagacaag atgacgatgg cctttaccgc ggatgacatc gccaaagccc
      541 acgagcagca caaattcgcc gcgctgatgg gcattgaagg cgggcacgcc atcgaaaatg
      601 acatacggct gctgcgtgac ttctatcgcc tcggcgtgcg ctacatgacc ctgacgtggt
      661 cgaacaccaa cgaatgggcg gattcctccg gtgacattca ggatccgaac gttaagcacc
      721 acaacggcat gacggatttt ggcaaagacg tggtgcgcga gatgaaccgg ctgggaatga
      781 tggtggatgt ctcccacgtt tctgacgcca cgtttttcca ggcgctgttg atcagtcagg
      841 ctccggtgat tgcgtcgcat tcttcttcgc gtgctctaac gccgcatccg cgcaacatga
      901 cggacgaaat gctgcgagcc gtggcgttga atgacggcgt tgtgatggtc aatttttact
      961 cggcgttcat tgatgcggac tacctgaagg caagcaccga tccggagaag gtcaaagagc
     1021 gtgaccagat gattgcttcc tatgagaagg aacacgctca ccctgacggc accccgctca
     1081 catacaacga agaggtggag ctcgagaaaa gatgggcagc acagttcccg cggccgcctt
     1141 tcaagtcgct catcgatcac attgaccata tagccaaggt cgcagggatt gaccacgtgg
     1201 gactgggttc cgacttcgat ggcgtgacct cccttcccca agggatcgac tctgtggcgg
     1261 acctgccgaa gattaccgaa gcactgatgc aacgcggcta cagcgaagcg gacgtaagaa
     1321 aaatccttgg cggaaatatc ctgcgcgtga tgcgccaggt ggaagagacc gcgaagcgca
     1381 ttcaatcgga gcgcaaagaa tctgatgcgc tctctgtgga agatatagac ctgatgctgg
     1441 gcaaccgagt tacgccagcg cacctggtcg agatcatccg gcagcacggg gtcaattttg
     1501 acctcacacc ggagcggcgc acgcgattca agaatgaaaa tgccgacgag gccgtgctga
     1561 ctgcaattat caagagccgc cgaaggtgaa ataccggcgg catcgggcaa tacggccggc
     1621 catggaatca tccgatttta tttcgcgccg gctttgcgga tgtagatgtt cccgttgaaa
     1681 ttcttaaact gaatctccgg accgcccccg ccgatctttc cgcgcacagt cttgtccatg
     1741 cgcacccgat acttgccacc gctggagcgc ccatcttcca cgatctggcg cggcgccgtc
     1801 gtatccagtt gcacgtcaaa gtcgctgtag acttcgccgt tgtccgtgcg catgcttacg
     1861 gtcgctttaa gatcggctgg gaatgtcaca tcaatgtttc cgttgagtga gctgaaagcc
     1921 attggtttgg catcggcgcg attcatggtg accaccacgt ttccattcag cgcatgggcc
     1981 accacgcttc cggaaacatt cttgagcgtg acgttcccat tgatatcatt cacgtccagt
     2041 tcgccgtcaa ctccggtcac aactatgttt ccgtcattta tcgtcttcag gctgagcgag
     2101 cttcgcacag gtacggtgat ggtcaaatcc accgtgcgct gcgtctggtc ggtggtgatc
     2161 cgtacctggt tgttctctgc ctctacattt agcccgctgg aggtcatggg aatgcgcttc
     2221 attccggcgg cattgcggtc agagcgccgt tcctcgtggt catcacgcag tcgcgcctca
     2281 accgtcacgt cctgcgcatt cccaccctgc accgtgatgt tgccctgaat aatgtggacg
     2341 ctcacgcttg ccggccggct cggatcagcg atctttgcta ccactctgcc atccggcgcg
     2401 ccctggccga agccggagca gccgagaacg actgtgaata atattgtcgg aagaaacata
     2461 tgttgattgc ggttcataag tttactcgtg gcgttcaaga atgcgaattt ctccattaag
     2521 gttttctgcc ttgatttccg ggccgccgga gccgacgcgg cctccggtaa agcgatcgga
     2581 ccgataaaca aaccttccgt tgtggcgctc agcactcact ggctgcgaag ggagagcggt
     2641 catctcaaaa tcgctgaaca cgccgccatt catcgtcttg aagcggaagt cagcggaaag
     2701 cggacgcaca aaccccaatt ccacgttgcc gttgatggtg ccgaaatccg acttctcttt
     2761 gggattctcg cggaaggtca ccttcacgcc gccattcact gtgcgcgcct gccctgagcc
     2821 ggcgacgtcc tgcatctcca gcgggccgtt gacgttgtgc acggagaaat tccccgccgt
     2881 gccgcgaacg aacacctttc ctgcattcac ggtcttgagc ttgagatcga ggttgcgcgg
     2941 gacctgaagc tgaaagtcca tcttcaccga gtaaccgcgg tccccatgcc agccatcgca
     3001 cccgttgttg caattgcaac ggaacggccc gtccacgtag agtttcaaca agtcgggctg
     3061 ctcggtgatg tcgagcttta cttctttctt cgcagcttcc attcgctctt tggattcggc
     3121 gcgcagcgtc ttattcacca ccatttgcac ctggtcagag ttactggcca caacttcaat
     3181 cgagccctgc acattgtcta tctccaacgt cttatgtgca gcactcagcg tgaacgtctt
     3241 ccgaatggtc tcctgctcct tgagcgacat ggctgaatca tcatcatctc gatcatcgtc
     3301 catatccgct ggctcggagt cgtgatctgc cccgtccatg gccggccctt cgtgatcatc
     3361 cacatcaggc gtctcgatct ccggtccttc gttcaggtca gcctcgacct gcggctcgtt
     3421 ttcatggtca aaatctttgt cctgctgatc tttattctgc cgatctttgt cctgacgctc
     3481 cggcgcctcg tggacacgtt ggaagctcag atgattggcc gctttcaccg tgctgctgaa
     3541 acgagttccg gcgaaggcca ctacgcctgc gacgattact gctgcaacaa ctagcctgtt
     3601 tttgagcata gctctccttc tgctttctca agctgggcgg cccggccgcc ggttaactca
     3661 gttgttggat accccagtca gcgcgcttct tcacggaagg atcaaggccc ggttcctgct
     3721 gcagcttttt gagctgctcc accgcgctgc gatcgcgcat atcaaccaga acgtcgatca
     3781 gcgcaacctg caccagcgga gattgctgcg tccccagcga atcgatcagt cctttgcgca
     3841 catcctggtg actggagaag tggccgagtg catcgagagc ggccagccgc acatcaacgc
     3901 tgttgtcata gcgcagcgtg tgcagcaggg cttcaagaat tcgcggatca gcttcatttt
     3961 gcgccaggct gtagctcact ccctgcagtc gttcactggc cgactgctgc ttcagcatcg
     4021 aaaccaccac cagctgccgc atgctggcta actcttgccg catctccgcc acgccttgca
     4081 cagcggcagg ctgcggccga tcaacatatc gtccagccag aaagccacaa agcaccagaa
     4141 caaacgaagc cgcgacactt actgctggag tgcgggccca ctggacaatc gcgccgaaat
     4201 ccagaaaccg gccatgctcc tgcttcaggt tcgccttttc ccagcggcct tcctggtagc
     4261 tctccagcat ggcgttgaag cgcgatttca ttgccgggct gggttgctgt ccagggatcg
     4321 aacccaatgc ctgccacatc accgcatcgg cacggcattc agcacactgt ctcaggtgtt
     4381 cttccagctt ttctgcctgc tgtggctgca aacgtccttg cagataatca gccagcaatt
     4441 ccgccatgga ttcgcacgtc attgcacact ccctgaaccg ggccgcatcc cggcgccttt
     4501 gaaaccttgt ttccttacca gcttgccgct ctccagcgct tcaaaaatct ctcgcaactc
     4561 gcgtaatgcc cggaatacct tcactttcac tgtgttcacc tcgcagccaa gcagcgctgc
     4621 gatttcctca tacttcaggt cctgaaaccg gctgagcacc agcacttccc gcttctcttc
     4681 tgccagctcc atcagagcca cgtgaagcag ctcgtgttgt tgtgcctgat cggccatatc
     4741 tttcggcatc actggcggtg acatctccgg ctcccaactc gtctccggct tctgcctgcg
     4801 ccagtggtcc acccgagtgt tgcgggcaat ctggtacatc cacgctcgaa agccagtctc
     4861 aggccggtag ctgtgccgat acttcaaaat gcggaaaaag acttcctgca ccagatcttc
     4921 gctcagtcct cgatcgcccg tcagcttgta ataaaagttc agcaagggag cctgatagcg
     4981 ctcaaaaagc acgcccagtg attcgcccac accgctgcgg acctgggaca tcagctgttc
     5041 atctgagatc gtctgggtca tgcgctttca ggccgcccgt tttgtccttt catggatgat
     5101 taccggggcc ttgggaaaag gttacacgct tcttctcgcg gctgccgcca agtgggcgaa
     5161 cagccggcct gcccctcgct ttacttatgc tcctgatcca tttttaatag tcgtttgcgt
     5221 gtagaggaga aacgaatgct tcgagttgca gtcatggtgc tgtgtctggg cattgccggg
     5281 gccgctcaga gcggtgcgca gaaacccgca gacacaaaga agtcaacggc tgcgccaaaa
     5341 tccggaacag ccgcgcacga gccaaccgca attattcaca ctactgccgg cgacttgaaa
     5401 tgcgagctct ttccagacaa agcccccaaa accgtggcca atttcatcgg gctcgcaaag
     5461 ggtaccaagg actggaagaa cccttccacc gggcaaatgg agcacgggaa gccgctctat
     5521 gacggtgtga ttttccatcg cactataccg ggctttgtga ttcaggcggg cgacccaacc
     5581 ggcagcggct caggggacat tggtttcacc tttgaagacg aaccgagcga ccttctttat
     5641 gatcgccccg gccgtctcgc catggccaat cgcggtccca gcaccaacag ctcgcagttt
     5701 ttcatcactg aatcaccact tccggcgctc aatccgcagc cgccacgtgt gtacaccatc
     5761 tttggccagt gcgatgaccc aagcatggag ttggtcaaga agattgctcg tatgccttgc
     5821 cagggtggcg gtacctgcac cagcaataac agccgtcccg aaaatccggt aaagatcact
     5881 cacatcgata ttcagaatgc tcctggagca aagtcgtccg cctcagcaga caaagccgct
     5941 aagacgacca agagctcaac caagaagtaa ggagaaggga ttttttaatg gcacgcgccg
     6001 ctggaaccta cgcaaccttc gataccacgg aaggcaagat cgtctgccgg ctgtttgaaa
     6061 aagaagcgcc ggtcaccacg aaaaacttca ttgaccttgc tgaaggcaag cgcagctgga
     6121 aagaccgcgt gagtggcaag ggtggtgacg gcccactcta tagcggcacc atcttccatc
     6181 gcgtgattcc ggattttatg atccagggtg gcgatcccag cggcacgggt atgggtggcc
     6241 ccggatataa gttcgaagac gaaaccaagg gctcgcc
//
LOCUS       DASQYP010000060        10574 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_192497, whole genome shotgun sequence.
ACCESSION   DASQYP010000060 DASQYP010000000
VERSION     DASQYP010000060.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 10574)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10574)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10574
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_192497"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..838)
                     /locus_tag="VE783_01775"
     CDS             complement(<1..838)
                     /locus_tag="VE783_01775"
                     /inference="COORDINATES: protein motif:HMM:NF024910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HYX52149.1"
                     /translation="MANLFATKPLNTILAEAHETGEHSLRRALGATNLITLGIGAIIG
                     TGIFVITGTATAEHAGPAIILSFIVAALGCVFAGLCYAEFASMIPVAGSAYTYGYATL
                     GEIFAWIIGWDLVLEYAFGAATVASGWSGYLISLLGDFGIKLPASLAGTRWDEFIFYN
                     NHWEPVKLILPKLKQAGIDPTTLPHAFGIFNLFGFIAIMIATIILVIGIKESANFNSA
                     IVVIKVCVLIIFVAIGANFLLKHPSLTTTNWHPFIPPNTGAFGQFGWSGILRAAGIIF
                     FAY"
     gene            complement(945..2432)
                     /locus_tag="VE783_01780"
     CDS             complement(945..2432)
                     /locus_tag="VE783_01780"
                     /inference="COORDINATES: protein motif:HMM:NF012544.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HYX52150.1"
                     /translation="MFRTKSIDRLRAESQETPLKRTLGPWSLVALGIGAIIGAGLFVR
                     TADAIAQRSGPSVTLAFILAGVGCAFAGLCYAEFASMIPIAGSAYTYSYVTMGELIAW
                     IIGWDLVLEYAVGAATVAISWSQYFNKVLEFIRPGLHVPYQWSHSPFETQMVTGTHGI
                     INLPAVGILLLLSMLLVRGTQESAIVNGLIVITKVSIVVMVILLGWGFINPANHTPFI
                     PAATNYVTSEGVSHPYGGLMGILGAAGVVFFAYIGFDAVSTAAQEAKNPRRDMPIGIL
                     GSLVICTLLYVLFSYVLSGLASVQDFRLEGKEASVAFAISHYMPGYAWLAKLVTVAIL
                     AGFSSVILVMLLGQSRVFYSMSEDGLVPKVFSDVHPKYRTPWKSNMLFFVFTSGFAAF
                     FPEDIVGEMTSIGTLFAFILVCIGVWLLRNRRPDLERAFRAPMVPVTATLGILVCGAM
                     IYGLGWTNWARLIGWLLIGFIFYFGYGRSHSKLAREEAASPATAR"
     gene            complement(2511..4049)
                     /locus_tag="VE783_01785"
     CDS             complement(2511..4049)
                     /locus_tag="VE783_01785"
                     /inference="COORDINATES: protein motif:HMM:NF024910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HYX52151.1"
                     /translation="MSTSAEVTPNSARNAESSELVKGLGLTSATTLVMGSMIGSGIFI
                     VSAEIAREVNSPGLLILAWAVTGFMTIVGALSYGELAAMMPRAGGQYVYLREALGPIW
                     GFLYGWTLFMVIQTGTVAAVGVAFGKFLGYFFPSVSADNWILHLWKVPPIHIGPMVLG
                     NMDVGLNTQNLCGIVIVVFLTGLNIFGIRGGALVQNIFTIAKVAALAALVLAGIFVGR
                     NAQAIAANFSNFWRWDAPHSATGTLAGPFVGVLTILAVAQVGSLFSADAWNNVTFTAG
                     EVKNPKRNLPLSLAIGTGVVILLYIAVNFIYLAVLPMNGDPNGATVFARGIKYATAER
                     VGTAALQQMFGSSGAGLMAIAILISTFGCCNGLILSGARVYYAMAKDGLFFKSAGEVH
                     ARYRTPVISLLVQAVWTCILCLSGTYGQLLDYIIFAVLVFYILTIGSLFVLRRTEPNA
                     ERPYRAIGYPLLPAIYIVMALFIDVVLLRYKPQYTWPGLIIVLLGIPVYFVWTRRTPR
                     TAGA"
     gene            complement(4068..4703)
                     /gene="thiE"
                     /locus_tag="VE783_01790"
     CDS             complement(4068..4703)
                     /gene="thiE"
                     /locus_tag="VE783_01790"
                     /EC_number="2.5.1.3"
                     /inference="COORDINATES: protein motif:HMM:TIGR00693.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004789 - thiamine-phosphate
                     diphosphorylase activity [Evidence IEA];
                     GO_process: GO:0009228 - thiamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine phosphate synthase"
                     /protein_id="HYX52152.1"
                     /translation="MILPLLYPIIEFSHFAAADDPLDEMLVFTEELLSAGATLIQYRD
                     KSSNSGRFLSHARELRRVMRDRAALIINDRPDLALACDADGVHLGQDDLSPEAARRIF
                     TAAGREKMLVGFSTHNLDQVRLADAMPIDYLAVGPVFATSSKANPDPVIGVEGVRQAR
                     AATEKPLVAIGGITRGNYREVREAGADSVAVISDLFESPGKAVADFLRVLG"
     gene            4839..7673
                     /locus_tag="VE783_01795"
     CDS             4839..7673
                     /locus_tag="VE783_01795"
                     /inference="COORDINATES: protein motif:HMM:TIGR00976.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CocE/NonD family hydrolase"
                     /protein_id="HYX52153.1"
                     /translation="MRIAVLAVLFSVLALNAGGRSSAPQANSKSGQSNTVSGVTGGFL
                     GTIQGEWHGTLDAGAQKLRLVLKITKADDGSYNATMDSVDQGAKDIPASSVKQEGSHV
                     TIQVAAIGGSYEGRLDPAKSEIQGEWKQGPASLPLTLQRTSGQNAGNQAEATPKEATG
                     LPASLAGFEDEATFNLIVNEEQLGTLKGSWKKDGSFENHATITFAGQTVNASIKIIPD
                     ETGRWKQIDIESPAATAKLVREGSSVTRTLKDKTTTFETHEGALLYENNAPLLASQAI
                     RAYDRAKGGVQKFQLVILPGVTKEVTLEAKEKLQRSVAGKDLSLIKFIYALPGVDLEV
                     YADDADKVYDIEVPAQKAAFVREGYATLRHAEAADPLLSAPKYDVEVQRAVGVPMRDG
                     VKLATDIFLPKGVEKPPLILVRTPYKKDMSELQARYYARRGYAFAVQDCRGRFASPGT
                     WEPFVNEAHDGYDAIEWLAKQPFTNGKVGLIGGSYLGWVQWWAASEHPPHLVTMIPNV
                     APPDPFYNLPYEYGAFFMWGSIWWADVLESEATADLSGAALSKIGDKKYGKLLRSLPV
                     IDLDKTVLGKENPYWRTWIAHPTNDAYWQRANFLERLKDVNIPVFHQSGWFDGDGIGS
                     KLNYLKMASYKHANQKLTLGPWGHTDTAGRMIGERDFTEKAIIDLQRDYLRWFDHWLK
                     GVDNGITKDPLVSIFVMGSNKWLHGATYPLEVTKFQKLYLASGGKANTAKGDGTLTFD
                     APAADNPADHYTYDPGDPTPDPRFYEESEADEKRVRSEDERKKERQGYHQKLSEERQD
                     MLVYSTPPLTKPLTFAGPVSAVLYASTSARDTDWYMTISEVEKDGKIFQLAQGKIRAR
                     FRKSMSAPELLKPDQVYEYTLDLWHTGITIPPGAQLRVEVASASFPLFSRNLNTGGHN
                     ETETKYVSAQQTIYHNAKYPSHVLLPVIPE"
     gene            complement(7990..9378)
                     /gene="accC"
                     /locus_tag="VE783_01800"
     CDS             complement(7990..9378)
                     /gene="accC"
                     /locus_tag="VE783_01800"
                     /EC_number="6.3.4.14"
                     /inference="COORDINATES: protein motif:HMM:NF006367.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009317 - acetyl-CoA carboxylase complex
                     [Evidence IEA];
                     GO_function: GO:0003989 - acetyl-CoA carboxylase activity
                     [Evidence IEA];
                     GO_function: GO:0004075 - biotin carboxylase activity
                     [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase biotin carboxylase
                     subunit"
                     /protein_id="HYX52154.1"
                     /translation="MFKKILIANRGEIALRVICACKELGIKTVAVYSDADRNSLHVRF
                     ADEAVCIGPPRSAESYLNIPAVISAAEITGVDAIHPGYGLLSENANFAEVCETSHLKF
                     IGPPPEVIRLMGEKEKARQAMKKTNVPILPGSDGVIASAEEAREWAKQIGYPVIVKAS
                     AGGGGRGMRVIRKEDELEGFFNSAQAEAAAAFGNGNLYMEKFIERPRHIEFQVMGDEH
                     GRVISLGERECSIQRRHQKLLEESPSTQVSEELRQQIGDKLSECLSEIGYVNAGTVEF
                     LMDEDGSLHFIEMNTRIQVEHPVTEMVTGIDLVKSQILLAVGAKLDEIIPCIPRKGQR
                     GHAIECRINAEHPEKFTPSAGKIKTFHTPGGLGIRVDTAAYAEGVIPPYYDSLIAKLI
                     SHGKDRAEAIMRMRRALEMFIVEGIHTTIPLHRRILADPDFQAGNFDTKYMERFLTKL
                     QEERAQESLVSA"
     gene            complement(9560..10078)
                     /gene="accB"
                     /locus_tag="VE783_01805"
     CDS             complement(9560..10078)
                     /gene="accB"
                     /locus_tag="VE783_01805"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR00531.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009317 - acetyl-CoA carboxylase complex
                     [Evidence IEA];
                     GO_function: GO:0003989 - acetyl-CoA carboxylase activity
                     [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase biotin carboxyl carrier
                     protein"
                     /protein_id="HYX52155.1"
                     /translation="MNQKELKELIEFLIDKDISEFELERGDVKVKIKRRGETVTQVIS
                     APVAPILAPIAAAPMAQASAGAHIPAAAAAATGGAGSAPAAPAEAEEDLHIVKSPIVG
                     TFYEAPAPGAPPFIKPGDIVSAGQVLCIIEAMKLMNEIESDASGEIVKILAANGKPVE
                     YGQPLFSIRARK"
     gene            complement(10097..>10574)
                     /locus_tag="VE783_01810"
     CDS             complement(10097..>10574)
                     /locus_tag="VE783_01810"
                     /inference="COORDINATES: protein motif:HMM:NF012766.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="M24 family metallopeptidase"
                     /protein_id="HYX52156.1"
                     /translation="GRASAQPVPSNGFIIVDYGVILAGYCSDMTRTLHVGPVSQKHHR
                     MYEAVRQAQLASIAAVRPGAEADEVDLAGRQVLKRAGFDAYFTHSTGHGVGIEIHEQP
                     RIARGQKQKLAPGMVITIEPGIYIPEEGGVRIEDMVLVTEAGHEVLTPTPKDLITV"
BASE COUNT         2403 a         3073 c         3035 g         2063 t
ORIGIN      
        1 tgtacgcaaa aaagatgatg cctgcggccc gcagaattcc tgaccagcca aactgcccaa
       61 atgctcctgt gttcggggga atgaagggat gccagttggt cgtggtgaga ctggggtgct
      121 tcaagagaaa atttgcgccg attgccacaa agatgatcag cacgcaaacc ttgatcacca
      181 cgatggcgga attgaaattc gccgactcct taattccaat caccaggatg atggtggcga
      241 tcatgatggc aataaagccg aagaggttga aaatcccaaa ggcgtgcggc agtgtcgtgg
      301 ggtctatccc cgcctgcttc aacttcggca ggatcagctt caccggctcc cagtgattgt
      361 tgtagaagat gaactcgtcc cagcgcgtgc ccgccagcga ggcaggtagc ttgatgccga
      421 aatccccaag cagcgaaatc agataaccgc tccagccgga agccacggtc gccgcgccga
      481 aagcgtactc cagcaccagg tcccagccga tgatccaggc aaagatctcg cccagagtgg
      541 catatccgta ggtgtaggcc gagcctgcca ccgggatcat cgaagcaaat tcggcataac
      601 agagccccgc aaacacgcag cccagcgcgg caacgataaa cgagaggatg atggccggcc
      661 cggcatgttc cgcggtggcg gttccggtga tcacaaaaat tccggtgccg atgatcgcgc
      721 cgatgccgag tgtgatcagg ttcgtagcgc cgagcgcgcg cctcaggctg tgttcgcccg
      781 tctcgtgggc ttcggcaaga attgtgttca gtggcttggt ggcgaaaagg ttggccattc
      841 tggttccttg ggagatttag acgcagtatt tgcgccggag aaaactgctc attttaaata
      901 aaaagccctc cgccgcggcg gagggctcaa tggaattgct ttgttcaacg agcagtggca
      961 ggcgaagcag cctcttccct tgccagcttg ctgtggctcc gcccgtatcc gaaatagaag
     1021 ataaagccga tcagcagcca gccgatgagc cgcgcccagt tggtccagcc caacccgtag
     1081 atcatggcgc cgcaaaccag gatgccgagc gtggccgtaa ccggaaccat cggagcgcgg
     1141 aaggccctct ccaggtccgg ccggcggtta cgcagcagcc acacgccaat acagaccagg
     1201 atgaaggcaa acagcgtgcc gatactcgtc atttcgccga cgatgtcttc cgggaagaag
     1261 gcggcgaagc cggacgtgaa gacaaagaaa agcatgttgg atttccatgg cgttctgtat
     1321 ttcgggtgaa cgtctgaaaa gaccttcggc accagcccgt cttcgctcat cgagtaaaag
     1381 acgcgggatt gtcccagcaa catgaccaga atcaccgacg agaagccggc gaggatggcg
     1441 acggtcacga gcttagccag ccacgcatag cccggcatgt aatgagaaat tgcaaatgcc
     1501 acggaagctt ccttgccttc gagccggaag tcctgcaccg aggccaatcc gctcagcacg
     1561 taggagaaca acacgtatag aagggtgcag atgaccagag atcccaggat gccgatcggc
     1621 atgtcacgtc tgggattctt ggcttcctgc gccgcggtgg aaacagcgtc aaacccgatg
     1681 taagcgaaga acacgacgcc ggcggcgccg agaattccca tgaggccgcc ataaggatgg
     1741 ctcacaccct ctgacgtcac gtagttagtc gctgcgggaa taaatggcgt gtggttcgcc
     1801 ggattgataa aaccccaacc cagcaagatg accataacaa cgatgctgac cttcgtgatc
     1861 acgatgaggc cattcacgat ggcagattcc tgcgtgccgc ggaccagcag catcgaaagc
     1921 agcagcagaa tccctaccgc cggaagatta atgatgccgt gcgtaccagt gaccatctgc
     1981 gtttcaaagg gagagtggct ccattgatag ggaacgtgta gacccggacg aatgaactcc
     2041 agcaccttgt tgaagtactg gctccatgag atcgccacgg ttgccgcgcc gaccgcgtat
     2101 tccaacacca ggtcccagcc aatgatccag gcaatcagct cacccatggt cacatacgag
     2161 taggtgtagg cgctgcccgc gatggggatc atcgaggcga attcggcgta acacagtccg
     2221 gcaaaggcgc aacccactcc ggccaggatg aaagccagag tcaccgaggg tccggaacgc
     2281 tgtgcgatgg cgtcggcggt gcgcacaaac aggcccgcgc cgatgatggc gcctatgccg
     2341 agcgcgacca gcgaccaggg accgagcgtg cgcttgagcg gtgtctcctg gctttccgct
     2401 ctcaggcgat caatggattt ggttctaaac aatgagccag ccaaattttt cccctcgctg
     2461 tgtttgaatt tgagttgagt tccaacttca tccgcagatc aagatgtttc tcacgcccca
     2521 gccgtgcgcg gcgtccggcg ggtccacacg aagtacaccg gaatccccag cagcacaatg
     2581 atcaggcccg gccaggtgta ttgcggtttg tagcgcaata atacgacatc gataaacaag
     2641 gccatcacga tataaatggc gggaagtaac ggatagccga tggcgcggta tggccgctcg
     2701 gcattcggct ccgtacggcg cagcacaaaa aggctgccga tggtcaatat ataaaagacc
     2761 agcacggcaa aaatgatgta atccagcaat tgcccataag tgccggacag gcacagaatg
     2821 caggtccaca ccgcttgcac aagcagcgag atcaccggcg tgcgatagcg ggcatggact
     2881 tcacccgcag acttgaaaaa caggccgtct ttggccatgg cgtaatagac gcgcgcgccg
     2941 gagaggatca ggccgttgca gcagccaaac gtagaaataa ggattgcgat ggccatcagc
     3001 cccgcgccgg aactgccgaa catctgctgc agtgcggcgg tgccaacccg ttcggcggtc
     3061 gcgtatttga tcccgcgggc aaacacggtt gctccattgg gatcgccgtt catcggcaac
     3121 acggccagat aaatgaagtt gacggcgatg tagagcagga tcaccacgcc ggtgccgatc
     3181 gccagcgaga gcggcaggtt gcgcttggga ttcttcactt ctccggcggt gaaagtcacg
     3241 ttgttccacg cgtcagccga aaacagcgag cccacctgcg cgacggccag tattgtcagc
     3301 acgccgacga atgggccggc cagagtgccc gtggctgagt gcggcgcatc ccagcgccag
     3361 aagttggaga agttggccgc gatcgcctgt gcattgcgac caacaaaaat tccggcgaga
     3421 accagcgccg ccagtgccgc gaccttggcg atcgtaaaaa tgttctggac cagcgcgccg
     3481 ccacgaatac cgaaaatgtt gagtccggtc agaaacacga caatcacgat tccgcagagg
     3541 ttctgcgtgt tcagtcccac gtccatgttg cccagaacca tggggccaat gtgaatgggc
     3601 ggcaccttcc agagatggag aatccagtta tcggcggaga ctgaggggaa gaaatatccc
     3661 agaaattttc cgaacgccac gccaaccgcc gcgaccgtcc ctgtctggat gaccatgaag
     3721 agcgtccatc cgtagagaaa tccccagatt ggtccaagcg cttcgcgcag ataaacgtac
     3781 tgcccgccgg cgcgaggcat catcgccgcc agctcaccgt aggaaagcgc gccgacaatc
     3841 gtcatgaaac cggtcacagc ccacgccagg atcagcaggc cgggcgagtt cacctcgcga
     3901 gcgatttcgg cagacactat gaagatgccg gaaccgatca tggaacccat gaccagggtg
     3961 gtggcgctgg tcaggccaag gcctttcacc agctcagaac tttcagcgtt ccgggctgag
     4021 ttgggggtga cttccgctga ggtggacata atttggttct gtatgtttta ccccaaaacc
     4081 cgcagaaaat ctgcaactgc tttccccgga gactcaaaaa ggtcagagat gacggccacc
     4141 gaatcggcgc ctgcttccct cacctcgcgg taatttcctc gggtaatccc cccaattgcg
     4201 accagcggtt tctcagtagc tgcacgcgcc tgccgcacac cttctactcc gatcacagga
     4261 tcagggttgg cctttgacga agtcgcaaac accggcccga cggcgaggta gtcgatcggc
     4321 atcgcgtcgg ccaaacgcac ctggtccaga ttgtgcgtgg aaaatccgac cagcattttt
     4381 tctcgacccg cagcggtgaa gatgcggcgc gctgcttcag gactaaggtc gtcctggccg
     4441 aggtggacgc cgtcggcatc gcaggccagc gcaagatcgg gccggtcgtt aatgatcagc
     4501 gcggcgcggt cgcgcatcac gcgccgcagc tcgcgtgcgt ggctgagaaa gcgccctgaa
     4561 ttggaagact tgtctcgata ttgaatcagc gtggcgccag cagacagaag ttcttcggta
     4621 aagacgagca tttcgtccaa gggatcatct gccgcagcaa aatgagagaa ctcgataatc
     4681 ggataaagga gcggaagaat catttttgta ggttgaaact tcagagacac tcaatcgtat
     4741 ttcaggtgag cattgacttc cactctgtcg cgtggtcaga tcagctttcc cccaccacga
     4801 cctcagggtc ccctgtgctg ttcaaggaga tatgcactat gcgcatcgca gtcctggctg
     4861 tgctcttttc agttctggcc ctgaacgctg gcggcaggtc ctcggcgccg caagccaaca
     4921 gtaagagcgg acaatcgaat acagtaagcg gagttacagg aggattcttg ggaacgattc
     4981 aaggcgagtg gcacggaacg ctcgacgccg gcgcgcaaaa gctgcggctg gtgctgaaga
     5041 tcactaaagc agacgacggc agttacaacg caactatgga cagcgttgat cagggggcca
     5101 aggacattcc cgccagcagc gtgaagcagg aaggcagcca cgtaaccatt caggttgccg
     5161 cgatcggcgg ctcctatgaa ggccgtttag atcccgccaa atcagagata cagggcgagt
     5221 ggaagcaggg ccccgccagc ctgccgctta cgcttcagcg gacttcaggc caaaatgcag
     5281 ggaaccaggc ggaagccacg cccaaagaag ccacaggact gcccgcaagc cttgcgggtt
     5341 ttgaagatga agccacgttt aacctgatcg tgaatgaaga acagcttggg actctgaaag
     5401 ggtcgtggaa gaaagacggc agctttgaga accacgccac cataaccttt gcgggccaaa
     5461 ccgtgaatgc cagtatcaag attatcccgg acgaaaccgg ccggtggaaa cagatcgata
     5521 ttgagtctcc ggcggcgacg gcgaagctgg tacgcgaggg ttcatccgtc acccgcaccc
     5581 tcaaagacaa gaccaccacg tttgagacgc acgagggcgc tttgctttat gagaacaatg
     5641 ccccactgct ggccagccag gccatccgcg cttacgatcg cgcaaagggc ggcgtgcaaa
     5701 aatttcaact ggtgatcctg ccaggcgtaa cgaaggaggt cacgctggag gccaaagaaa
     5761 agctgcagcg atccgtcgcg ggcaaagacc tctcactcat aaaattcatc tatgccctgc
     5821 ccggagtcga tcttgaggtt tatgccgacg acgccgacaa ggtctatgac attgaggtcc
     5881 cggcgcagaa ggcggctttc gtgcgcgaag gctacgccac gctacgtcac gctgaagccg
     5941 cggacccgct tctctctgcg ccgaaatacg atgtcgaggt gcagcgcgcg gtcggcgtac
     6001 ccatgcgcga tggagtgaag ctggcgaccg atatctttct tcccaaaggc gtcgagaagc
     6061 ctccgctgat tctggttcgc acgccttaca agaaggacat gagcgagttg caggcccggt
     6121 actacgcgcg ccgcggctac gccttcgccg tgcaggattg ccgcggacga tttgcatcgc
     6181 cgggcacgtg ggaaccattc gtgaacgaag cgcacgatgg ctatgacgca atcgagtggc
     6241 tggccaagca gcctttcacc aacggcaaag tcggcctgat tggcggatca tatctgggct
     6301 gggtgcagtg gtgggcggcc agcgagcatc cgccgcacct ggtcaccatg attccgaacg
     6361 tcgctccgcc cgatccgttc tataacctgc cttacgaata cggcgcgttc tttatgtggg
     6421 gctccatctg gtgggcagac gtgctggaga gcgaggccac cgccgatctc tcaggcgccg
     6481 cactcagcaa aattggcgac aaaaaatacg gcaagctgct gcgctcgctg ccggtgatcg
     6541 atctcgataa aaccgtgctg ggcaaggaga acccatactg gcgcacgtgg atcgcccatc
     6601 ccacgaacga cgcatattgg cagagggcca acttccttga gcggctgaaa gacgtaaaca
     6661 ttcccgtctt ccatcagtca ggctggtttg acggcgacgg cattggcagc aagctcaatt
     6721 atctaaagat ggccagctac aaacatgcca accagaagct gacgctcggc ccatggggac
     6781 acaccgacac cgccggccgg atgattggcg agcgcgactt caccgagaaa gccatcatcg
     6841 atctgcaacg cgattacctg cgctggttcg atcactggct caaaggcgta gacaacggaa
     6901 ttaccaaaga tccgctggtc agcatttttg tgatgggctc gaacaagtgg ctgcatggcg
     6961 caacctatcc gctggaagtc acgaaattcc agaagctcta tctcgccagc ggcggcaaag
     7021 ccaatacggc gaaaggtgac ggcacgctta cattcgacgc gcctgccgca gataatccag
     7081 ccgaccatta cacctatgat cctggcgatc ccacgcctga tccacgcttc tatgaagaat
     7141 ctgaggcgga cgaaaagcgc gtgcggtcgg aagacgaacg caagaaagaa cgccagggct
     7201 atcaccagaa actgagcgaa gagcggcagg acatgctggt ttattccaca ccgcctttga
     7261 ccaaacccct cacctttgcc gggccggttt cagcggtgct ttacgcttcc acctcggcac
     7321 gcgataccga ctggtacatg acgatttccg aagtagaaaa agatgggaaa atctttcagc
     7381 tcgcgcaagg caagatccgt gcgcgctttc gcaaatcgat gtcagcgccg gagttactca
     7441 aacccgatca ggtttacgag tacacgctcg acctgtggca cacgggaatc accattccgc
     7501 ccggagcgca gctgcgtgtg gaggtggcca gcgcgtcatt cccgctcttc tcgcgcaacc
     7561 tgaataccgg tggtcacaac gagaccgaaa ccaagtacgt gtcagcgcag cagacgattt
     7621 atcacaacgc gaaatatcct tcgcatgtgt tgttgccggt cattccggaa tagatattgt
     7681 ttttatcccg agcgttagcg aggggaaccc tattgccgga aaaggacagg acgtgagatc
     7741 agaagatatc tgataactga gttaacccgg ctaatacccg gtcccgggcc gatgattgat
     7801 tgcccggccg tctcctctca gcacatctga acgcagctct tcttggcttt gtagcacagg
     7861 cgctgtgcta caaaccggat tacccgattg agtagtttga gagacagctg tgaatcgccc
     7921 tcagatcttc gaagtcatta gggatccctc gcttcgctcg ggactgaagg cgaccagcga
     7981 tgctgagatc tatgcgctga ccaggctctc ctgcgcgcgc tcttcctgca gcttcgttag
     8041 gaaacgttcc atgtatttgg tatcgaagtt gccggcctga aaatcggggt cggccagaat
     8101 gcggcggtgc agcgggatgg tggtatgaat gccttccaca ataaacattt ccaaagcccg
     8161 acgcatgcgc atgatggctt cggcgcggtc cttgccgtgg ctgatcaact tggcgatgag
     8221 tgaatcgtaa tagggtggaa tcacgccttc agcataggcc gcggtatcca cgcggatgcc
     8281 aaggccgccg ggagtgtgga aggttttgat cttccctgcc gatggcgtga atttttccgg
     8341 atgctcggcg ttgatgcggc attcaatggc gtgtccgcgc tggcctttgc ggggaataca
     8401 gggaatgatt tcgtccagct tagcgccgac cgcgagcaga atctgcgact tcaccaagtc
     8461 aatgcccgtc accatctcag taaccggatg ctccacctgg atgcgggtgt tcatttcgat
     8521 aaagtgcagg ctcccgtctt catccatgag gaactcaacc gtgccggcgt tcacgtaacc
     8581 gatttcagac agacattccg aaagcttgtc accgatctgc tgccgcaact cttcactgac
     8641 ttgcgtagaa ggcgactctt ccagcagctt ctggtggcga cgctggatac tgcactcgcg
     8701 ctccccgagg ctgatcacgc ggccgtgctc atcgcccatc acctggaact caatgtggcg
     8761 tggccgctcg atgaactttt ccatataaag attgccgttg ccaaaggcag ccgcagcttc
     8821 ggcctgagcg gaattgaaga agccttccag ttcgtcttct ttgcggatga cgcgcatacc
     8881 gcgtccaccg ccgccggctg aggccttcac aatcaccgga taaccaatct gcttcgccca
     8941 ctcgcgggct tcttccgccg acgcaatcac gccatccgac ccgggcagga tcgggacatt
     9001 ggtctttttc atggcttggc gggccttttc tttttcgccc atcaggcgga tgacctcggg
     9061 cggcggcccg ataaatttca ggtgactggt ctcgcagacc tcagcgaagt tggcgttctc
     9121 gctcagcagg ccgtaaccgg gatggatggc atcaacgccg gtgatttcgg cagcgctgat
     9181 caccgccggg atgttcagat agctttcggc cgagcgcggc gggccgatgc agacggcttc
     9241 atcggcgaaa cggacatgca gcgagttgcg gtccgcgtca ctgtagaccg cgacagtctt
     9301 gatcccaagt tccttgcacg cgcagatgac gcggagcgcg atttcaccac ggttggcaat
     9361 taatatcttt ttaaacattc agattagctt gtgtgccgcc cctgacgggg ctccctcttt
     9421 aggctttggc ttcccggggc tttccgcccc ggcttgcact attccgccct tcgggctggt
     9481 tgtttggctg caaattcgtt tgcctcaacc gagtactgct atcgggccag actcagcttg
     9541 gcatccgcga gcactagcat tatttccgcg cccggatgga gaacagcggc tgaccgtact
     9601 ccacaggttt accgttcgcg gccaggattt tcacaatctc gcccgaggca tcagactcaa
     9661 tctcattcat gagcttcatg gcttctatga tgcacaggac ctgtccggca gaaacaatgt
     9721 cgcccggctt gatgaagggc ggagctccgg gggcaggcgc ttcatagaag gtgcccacga
     9781 tcggcgactt cacaatatgc aggtcttctt cggcttccgc cggcgcggca ggcgcggacc
     9841 cggcaccacc ggtagctgct gcagcagcgg ccggtatatg tgctcccgcg gaagcctgcg
     9901 ccatgggcgc tgccgcgatt ggcgcgagga tcggcgcgac cggcgccgag atcacctggg
     9961 tcacggtctc gccgcggcgt ttgatcttca ccttcacatc tccgcgttcc agctcgaatt
    10021 cggagatgtc cttgtcaata agaaattcga taagctcttt cagctctttt tgattcatga
    10081 actcgctggt ctccggctac accgtgatca ggtcctttgg ggttggggta agaacctcat
    10141 ggccggcctc agtgaccagg accatgtctt caatgcgcac tccgccttct tccggtatat
    10201 agatgcctgg ttcgatggtg attaccatgc ccggcgcaag cttttgcttt tggccgcggg
    10261 cgatgcgggg ctgctcgtgg atttcaatgc ccaccccgtg gccggtggag tgggtaaagt
    10321 aagcgtcaaa tccggctctt ttcagcacct gacgccccgc aaggtccact tcatccgcct
    10381 ccgccccggg ccgcacggct gcaatggaag ccagctgcgc ctgccgcacc gcttcataca
    10441 tccggtgatg tttctgggaa acaggaccca cgtgaagcgt gcgggtcatg tcagaacagt
    10501 aaccggcgag tataacaccg taatccacga ttataaatcc attgctggga acaggttgcg
    10561 cggaagcccg cccg
//
LOCUS       DASQYP010000061         5380 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_129285, whole genome shotgun sequence.
ACCESSION   DASQYP010000061 DASQYP010000000
VERSION     DASQYP010000061.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 5380)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5380)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5380
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_129285"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            144..968
                     /locus_tag="VE783_01815"
     CDS             144..968
                     /locus_tag="VE783_01815"
                     /inference="COORDINATES: protein motif:HMM:NF024743.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4097 family beta strand repeat-containing
                     protein"
                     /protein_id="HYX52157.1"
                     /translation="MRLAPVASLLLSIGLVGCMDGPAREGSFDRTFSVSGKVMLSVED
                     GAGNIVVHPGTDQKVIVNAHIRARGSFTGMSSEEKVKRITANPPITQSGSTIRITRPS
                     DSELTRNVFIDYDITAPAQSQVSAFTGAGKIDIRGMQASVEATSGAGAIIVEDLSDDA
                     RVHTGAGNIDVRTVRGRVDAESGAGRITVRGEPQKDWRVTTGAGSIKLELPPDASLDL
                     DAETGMGRVNLASEFQMKDASVSTGRVHGTMGKGGPSVKITNGAGSIEIARGTEQN"
     gene            1187..3760
                     /locus_tag="VE783_01820"
     CDS             1187..3760
                     /locus_tag="VE783_01820"
                     /EC_number="3.6.1.1"
                     /inference="COORDINATES: protein motif:HMM:NF001950.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium-translocating pyrophosphatase"
                     /protein_id="HYX52158.1"
                     /translation="MHSWLLTGLMRRANSTRRILAPVAMVFMVALAISSLAYPQAAAP
                     AAQPATTANAQQTAAQPEPTPGSTTPAHHAGGEAGLILPDMKSVDFLGGTNGYKLLSI
                     GLIFCALGLLFGLMIYVQLKNLPVHRSMREISELIYETCKTYLITQGKFILILEAFIA
                     IVIVLYFGVLQPLGAMRVIIVLLFSLVGIAGSYGVAWFGIRVNTFANSRTAFAGLRGK
                     PYPIYAIPLKAGMSIGMLLISVELLIMLCILLFIPGDYAGPCFIGFAIGESLGAAALR
                     IAGGIFTKIADIGSDLMKIVFKIKEDDARNPGVIADCTGDNAGDSVGPSADGFETYGV
                     TGVALITFILLAVHDPRVKVQLLVWIFVMRIMMLVASAVSYFANEAIAKGRYANSDDM
                     NFEAPLTSLVWITSIVSIVLTFIVSRLMIPELGGDTSLWWKLSLIISCGTLAGAIIPE
                     LVKVFTSVDSRHVKEVVTSSEEGGPSLNILSGLVAGDFSAFWLGISIVALMAIGFYVS
                     TQGLGAAMLAPAVFSFGLVAFGFLGMGPVTIAVDSYGPVTDNAQSVYELSLIEQIPNV
                     QAELKKDFGFTVNFERAKHLLEENDGAGNTFKATAKPVLIGTAVVGATTMIFSIMMAL
                     TNGLTEHTENLSLLHAPFVLGLITGGAIIYWFTGASTQAVTTGAYRAVEFIKRNIKLE
                     GVEKASVADSKKVVQICTEYAQKGMFNIFLTVFFATLAFAFAESYFFIGYLISIAIFG
                     LYQAIFMANAGGAWDNAKKVVEVELKMKGSPLHDATVVGDTVGDPFKDTSSVAMNPVI
                     KFTTLFGLLAVELAESLRGGENHITAILAVIFFLIAAFFVFRSFYGMRIGTQKAQAAA
                     K"
     gene            complement(3827..4165)
                     /locus_tag="VE783_01825"
     CDS             complement(3827..4165)
                     /locus_tag="VE783_01825"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52159.1"
                     /translation="MIRWAPEVLAQREPRTPSQMEKDQETQRLKEANSRRQEDLRADT
                     DRLLQLATELKAAVDKSNENLLSLDVVRKADEVEKLAKRVRDKMKDAVGPGPRTEPVI
                     VPKVPGRPPG"
     gene            4331..5200
                     /locus_tag="VE783_01830"
     CDS             4331..5200
                     /locus_tag="VE783_01830"
                     /inference="COORDINATES: protein motif:HMM:NF044972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008381 - mechanosensitive monoatomic ion
                     channel activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="mechanosensitive ion channel family protein"
                     /protein_id="HYX52160.1"
                     /translation="MEERFSNIWAQWHNYLVEWTRDRAPKLLVIIVLAFIFARLLRVI
                     TSKVVALSEKGGKRSPVRSQQVKTVAGVVYSAGLFLIIFFTGMSALRDAFNINIEPLL
                     ASAGIAGLAIGFGAQTLVKDVINGFFILAENQFDVGDTIKAAGVSGTVEEITMRRTIL
                     RDADGTLHIVPNGSIQIVSNTTRDWSQVSLHVAVDYGENSDRIVRLLKEVAEAFYGDE
                     DMRPDVVAEPQVHGIERIRGQEVDYLMTVKVRPGKQYPVARELRRRIKTCFEQQKVKA
                     GSPTQMYIGQGPI"
BASE COUNT         1118 a         1549 c         1526 g         1187 t
ORIGIN      
        1 acatttgtcc aggcagcggt ggggcatcca ttgctcgcca taggcagata agaacacgct
       61 aaatcgacga gagacaaagg gaacttttcg gggtgatcgc acgtttacta tttcagagtc
      121 gatttctgcc gaggagtgtg ctcatgcgtc tcgcgccggt tgcttccctt ctcttgtcga
      181 ttggtctggt cggctgtatg gatggtccgg cccgcgaagg cagttttgat cgtactttca
      241 gtgtttccgg caaggtgatg ctgagcgtgg aagacggcgc cggtaatatc gtggtgcatc
      301 cgggtacgga tcagaaagta atcgtcaacg ctcatatccg tgcgcgtggc tccttcactg
      361 ggatgagcag cgaggagaag gtcaaaagga taaccgcgaa tccgccgatc acgcagagcg
      421 gcagcaccat ccgtatcact cgcccttcag attccgagct gacgcgaaat gtatttatcg
      481 attacgacat caccgcgccc gcacagtcgc aggtaagcgc ctttaccggc gcgggcaaga
      541 tcgacattcg cggcatgcag gcatcggtgg aagccacgtc aggagccgga gcaatcattg
      601 tggaagacct gagcgatgac gcgcgcgttc acaccggagc cggcaacatc gacgtaagaa
      661 cggttcgcgg gcgcgttgac gccgagagcg gcgccggaag aatcaccgtg cgcggcgagc
      721 cacagaagga ctggcgcgtt accaccggcg cgggctctat caagctggaa ctcccgcccg
      781 acgcttcgtt ggaccttgac gccgaaaccg gcatgggcag ggtcaacctt gcgtctgagt
      841 tccagatgaa ggatgcaagt gtttcaaccg gccgtgttca tggcaccatg ggcaaaggcg
      901 gacccagcgt gaaaataacg aatggggcag gaagtatcga aattgcgcgc ggaacggaac
      961 agaactaagg cccttctgcg gaattgacct gactttcttc gaaatgatat aaagacacgt
     1021 ttcaccgcga gcttgaagtg tgcttgcttt gcggtggact ccgacgcggc caaacctcaa
     1081 accacggttc ttgatgtgga agcgcgtatc cggaattgcc caagaaggcg ttaagtaaaa
     1141 ttacaaaccc ccaatttctt tcagtgtgtt atttggagga atctttatgc acagctggct
     1201 cctaacgggc ctgatgcggc gtgcaaattc cacacgccgg attctcgcgc cggtagccat
     1261 ggtgttcatg gtggccctgg caatttcgtc tctcgcttac ccacaggcgg cagctccagc
     1321 agctcagccg gccacaacgg ctaatgcgca gcaaacggca gcccagcccg aaccgacccc
     1381 gggatcaacc acacccgccc accacgccgg gggcgaagcc ggtttgatcc tgccggacat
     1441 gaagagcgtc gatttcctgg gtggcaccaa cggctacaag ctgctctcca tcggactgat
     1501 cttctgcgcg ctcggtcttc tcttcggctt gatgatttac gtccagctta agaacctgcc
     1561 ggtgcatcga tccatgcggg aaatttccga gctgatttat gagacctgca aaacgtatct
     1621 catcacgcag ggcaagttca tcctgattct tgaggccttt attgcgatcg tgatcgtgct
     1681 ttatttcggc gtcctgcagc cgctcggcgc catgcgcgtg atcatcgtgc tgctgttcag
     1741 cctggtggga atcgccggca gctacggcgt ggcgtggttc ggcatccggg tgaatacctt
     1801 tgcgaactcg cgtaccgcgt ttgccgggct tcgcggcaag ccctatccga tctatgccat
     1861 tcccctcaag gccgggatga gcatcggcat gctgctgatc agcgtggaac tgctgatcat
     1921 gttgtgcatc ctgctcttca ttccgggcga ctacgcgggt ccgtgcttca tcggattcgc
     1981 gatcggtgaa tctctcggcg cggcggcgct gcgcattgcc ggcggaattt tcaccaaaat
     2041 cgccgacatc ggttccgatc tgatgaagat cgtcttcaag atcaaggaag acgacgcgcg
     2101 taaccccggc gtgattgccg actgcacggg cgacaatgcc ggcgactccg ttggcccgag
     2161 cgccgacggc ttcgaaacct atggcgttac aggcgtagcg ctgatcacct tcatcctgct
     2221 cgccgtacac gatccgcgag tgaaagttca gctgctggtc tggatcttcg tcatgcgcat
     2281 catgatgctg gtggccagcg cggtctcgta cttcgccaat gaagccatcg ccaagggccg
     2341 ctacgcaaat tcagacgaca tgaatttcga ggcgcccctg acctcgctgg tctggatcac
     2401 ctccatcgtc tcgattgtcc tgaccttcat cgtttccagg ctgatgatcc ctgagctcgg
     2461 tggtgacacc agcctgtggt ggaagctttc cctgatcatc tcctgcggaa ccctggctgg
     2521 cgcgatcatc cccgaactgg tcaaagtctt cacttcggtt gactcgcggc acgtgaaaga
     2581 agtggttaca tcgtcagaag aaggcggacc ttctctcaac atcctttccg gacttgtggc
     2641 cggtgacttc tcagccttct ggcttggtat cagcattgtg gccctcatgg ccatcgggtt
     2701 ctacgtgagc acccagggat taggcgcagc catgctcgct ccggctgtgt tctccttcgg
     2761 acttgttgcc tttggcttcc tcggcatggg ccccgtcacc atcgccgtgg actcctatgg
     2821 tccggtaact gacaacgctc agtccgttta tgaactctcg ctcatcgagc agattccgaa
     2881 tgtccaggcg gaactgaaga aggactttgg cttcaccgta aactttgagc gcgccaagca
     2941 cctgctggaa gaaaacgacg gtgcgggaaa caccttcaag gcgacggcca agccggtgct
     3001 gatcggaact gccgtagtag gcgccaccac aatgattttc tccattatga tggccctgac
     3061 caacggtctt accgagcaca cggaaaacct ttccttgctg catgcgccct ttgtgctcgg
     3121 actcatcacc ggcggcgcca tcatctactg gttcaccggc gcttccactc aggccgtgac
     3181 caccggcgct tatcgagcgg tggagttcat taaacgcaac atcaaactgg aaggcgtgga
     3241 gaaggcttcg gtggcagact ccaagaaagt ggtgcagatc tgcactgagt acgcgcagaa
     3301 aggtatgttc aatatcttcc tgaccgtgtt ctttgcgact ctggcgttcg cgttcgccga
     3361 atcgtacttc ttcatcggct acctgatctc aatcgcgatt ttcggcttgt accaggcgat
     3421 cttcatggcc aacgccggcg gtgcttggga taacgccaag aaggttgtcg aagtcgagct
     3481 gaagatgaaa ggctcgccgc tgcatgatgc caccgtcgtc ggcgacactg tcggcgatcc
     3541 tttcaaggac acttcttccg tggccatgaa ccccgttatc aagttcacca cgctcttcgg
     3601 gcttctggcg gttgagctgg cggaaagcct tcgcggcggc gagaaccaca tcaccgccat
     3661 tctggccgtc atcttcttcc tgattgcagc attctttgtg ttccgttcct tctacggaat
     3721 gcggatcggc actcagaagg cgcaagcggc agcgaagtag gccacaatca ctcaaaacta
     3781 aaatgggccc gtcgcaagac gggccttaaa cttttctggt cttgttctat cccggcggcc
     3841 ttcctggcac tttgggcacg atgacgggct cggttctcgg ccccggccca accgcgtcct
     3901 tcattttgtc gcgcacacgc tttgccagct tctccacttc atcggcttta cgcaccacat
     3961 ccagtgaaag caggttctcg ttcgatttgt ccaccgcagc tttgagttcc gttgctagtt
     4021 gcagcaggcg gtccgtgtcg gcgcgcaggt cttcttgcct cctggaatta gcttctttga
     4081 gacgctgggt ctcctggtct ttttccatct gcgagggcgt acgtggctct ctttgggcca
     4141 gcacttccgg cgcccagcga atcataaaca cgaataagaa aatcgacaga agcagaatga
     4201 gaagtcgtgg ttttgacggc acaacaatgc ctttcatccg ctggcaagcg ccgcggcaga
     4261 aatatcaatg gtgaatgaat ctgctgcaat tataaccagc catttcctct cagctataat
     4321 ccgcatcgtg atggaagagc gtttcagcaa tatctgggcg caatggcaca actatctggt
     4381 ggagtggacc cgcgaccgcg ctcccaagct gctggtcatc attgtcctgg ccttcatctt
     4441 tgcccggctg ctgagagtca tcaccagcaa agtggttgcg ctctcagaaa aaggcggcaa
     4501 gcgcagcccg gtacgtagcc agcaggtcaa gacggtagcg ggtgtagttt acagtgcggg
     4561 attgttcctg atcatcttct tcaccggcat gagcgcactc cgtgatgcgt tcaacatcaa
     4621 tattgaaccg ctcctggcca gcgcggggat tgccgggctc gcgatcggct tcggcgccca
     4681 gactctggtg aaggacgtga tcaatggctt cttcatcctc gccgaaaatc aattcgatgt
     4741 tggggatacc atcaaggccg cgggcgtgag cggcacggtg gaagagatca ccatgcgccg
     4801 cactatcctg cgcgacgccg atggcacgct tcacatcgtt cccaacggct ccatacagat
     4861 cgtaagcaac accacgcgcg actggtcaca ggtgagcctg catgtggcgg tggattatgg
     4921 tgagaacagt gatcgcatcg ttcgcctgct gaaggaagta gcagaggcat tctacggcga
     4981 cgaagatatg cgtcccgacg tggtggccga accgcaggtc cacggaatcg aacgcattcg
     5041 cggccaggaa gtggattacc tgatgaccgt aaaggtccgg ccgggcaagc agtacccggt
     5101 cgcgcgcgaa ttgcgccgcc gcatcaagac ctgctttgag cagcagaagg taaaggccgg
     5161 ttcgcccacc cagatgtaca tcggacaagg gccgatttaa tttgaggaga agaaaacaat
     5221 ggatctcggg ctcaaaggcc gcggtgtaat cgttgcggca tccagcgaag gcattggact
     5281 ggcgacggcg gaagcctttg cccgcgaagg cgcgcaggtt gccatgtgtg cgcgcaccga
     5341 gacgacgctg cgggaagctg ccgataagct acgcaaacaa
//
LOCUS       DASQYP010000062         6494 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_44170, whole genome shotgun sequence.
ACCESSION   DASQYP010000062 DASQYP010000000
VERSION     DASQYP010000062.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 6494)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6494)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6494
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_44170"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..216
                     /locus_tag="VE783_01835"
     CDS             <1..216
                     /locus_tag="VE783_01835"
                     /inference="COORDINATES: protein motif:HMM:NF015251.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52161.1"
                     /translation="FCVWDDQIGKYRICFEPAVNLVSTGDADSDAIANTAAFTRVIER
                     YVRQYPDQWLWVHRRWKTRPAGEPPIY"
     gene            complement(210..446)
                     /locus_tag="VE783_01840"
     CDS             complement(210..446)
                     /locus_tag="VE783_01840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017979466.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52162.1"
                     /translation="MFAVTPLSVFGLVAVTAMVTFYALEDRAPGWIMAFAGACVLGSI
                     YGFLQGAWPFGLVELVWAGIAVKKWNGRKRETVQ"
     gene            complement(546..740)
                     /locus_tag="VE783_01845"
     CDS             complement(546..740)
                     /locus_tag="VE783_01845"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52163.1"
                     /translation="MFLHYLAIVLEIIFFVGLIGSLVVAILAFVGDLHVFFEDEKTED
                     SGRSVPAPGIATAEPHAGRS"
     gene            complement(893..1585)
                     /locus_tag="VE783_01850"
     CDS             complement(893..1585)
                     /locus_tag="VE783_01850"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HYX52164.1"
                     /translation="MSDDPKKILVVDDEAQITRVLQRGLESAGYQVRTANDGRTGLES
                     FRSWVPDLVISDLSMPGFNGLELCERIRQLSDIPILVLSVRDDEPTKVRALDLGADDY
                     VAKPFGMAELTARVRALLRRSAPPLETESGFEVGDFKIDPDQRLVMVKSRPVHLTPKE
                     FDLMQFLMANRGKVLTHKTILSAVWGSNSTEQPEYLRVFIGALRKKLEENPRAPRYLK
                     TEPWIGYRFDPE"
     gene            complement(1582..2613)
                     /locus_tag="VE783_01855"
     CDS             complement(1582..2613)
                     /locus_tag="VE783_01855"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HYX52165.1"
                     /translation="MHSLPRWAHYLVALIALSATVALAHVLRENLNQTAVALLLVLLV
                     IFVAVRAGRGPAIFIAIVAGIFFNFFFIGPVYSLRIHRTQDIIAYVVFVVAAVLVGHL
                     SSHLERRVIESEELQRSEQLKTALLDAVTHDLRTPLTSIKAAITTLRSGGVAEPVQRE
                     LEEVIDQEADRLNHFIQGMMDLARLEAGELSLQSRAVTADEIMEDALARAEPLLANHP
                     VEAEVDPGLPKLSADPRLISQVLFTIIENAAKYSPPGTPISVSAARNGSGAVCFSIAD
                     QGPGIAPEMRDEVFRKFVRAGGRPGFGVGLAIARGIVEAHRGKIWIESGKGTQGTRVQ
                     FSVPAGDTA"
     gene            2751..3389
                     /locus_tag="VE783_01860"
     CDS             2751..3389
                     /locus_tag="VE783_01860"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52166.1"
                     /translation="MALVVVGGHSRNVGKTSVVAGIIAALPELNWTALKITQFGHGIC
                     SADGKPCDCDTGDDHFRAISEERDLSGETDSSRFLTAGARKALWVRTRQGRLAEAVPD
                     IERKIAGAENVIMESNSIVRFLKPDLYISVLDPDTEDFKVSAMDALDRADALIIHCDV
                     HNGGATDRSPRWQFVKPEHLAGKPTFHIQPPPYVTTEIVEFVRARLATQPVS"
     gene            3414..4445
                     /locus_tag="VE783_01865"
     CDS             3414..4445
                     /locus_tag="VE783_01865"
                     /inference="COORDINATES: protein motif:HMM:NF012770.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HYX52167.1"
                     /translation="MHSNLSLAKLVACYPARREVFMFKELAAAFLVLSSALMSAQVQH
                     TRGMAHSTDIDIAYETLGRQGSALPVFAINGGPGLTHAYMVQNDLWERAARKRLVVFY
                     DQRGTGASKPKGTMAVSQSIQAQVADLDAVRQALKLEKIALVGDSYGGLVAMAYAAAH
                     PEHVTKLVLSDSPGPSWKSIVHLLPDVFPDVGEQNEQEMKKLGGGNSGAQPGDQQNEI
                     TRRANQNDAAARAGLRNHFKMIFYSPEKRDAYMSGMGDLGYEPSVAEAVSKATEGLDL
                     SSKLTDFKFPTLVINGRYDMNVAPLTAWRLAHDIPGAKVVFFEKSGHLPSYEEPEKYL
                     QVLEEFLGR"
     gene            4591..5094
                     /locus_tag="VE783_01870"
     CDS             4591..5094
                     /locus_tag="VE783_01870"
                     /inference="COORDINATES: protein motif:HMM:NF015862.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme-binding protein"
                     /protein_id="HYX52168.1"
                     /translation="MKSLRFTVLVSVITLAFAAVPLHTQMLPNPYGPPISLDSAKKIA
                     AAALAEAAKNHWNMAVAIVDPNGTLIYYEKMDNTQIGSAQVSINKARSAALYKRPTKA
                     FQDALAGGGAGLRVLNLEGAVAVEGGVPLLADGKIIGAVGVSGDTSDHDGQCAQAGAA
                     SLSQAQH"
     gene            complement(5163..6359)
                     /locus_tag="VE783_01875"
     CDS             complement(5163..6359)
                     /locus_tag="VE783_01875"
                     /inference="COORDINATES: protein motif:HMM:NF016101.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016788 - hydrolase activity, acting on
                     ester bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alkaline phosphatase family protein"
                     /protein_id="HYX52169.1"
                     /translation="MNRTKLLTRIINAGILLLLAGLGLSVTVAHAGAQVPRSKHVYIV
                     AEENRSYEEIIGSSAMPYLNSIIAKGALATQFYANEHGSLENYLLVTAGQYITHNNST
                     TATFSVDNIERHLLAKGMTFKSYAQSLPYAGYTGLYSGAYMKRHAPLIYYNEMAKSSL
                     IKDHQSSADLAKDIANNTLPNFAFITPDGNHDLHNCPSGITVCKQTADAWLKANIGPL
                     LASPPFQPGGDGVLIIWSDEADLNTDNRCSATVSTGCGGRVVVTMIGPQVKAGFKSVS
                     LYHQQSVLKTMLMLLGEETSFPGAAQTAPAMAEFFKGANSVTILAPTSSTVTSTSVRL
                     AASAKASNPITAMKIYVNGVNKGSVSGALIDKTISLPVGSHNVVYQAWDSKGNIYKNS
                     KAVTVQ"
BASE COUNT         1444 a         1799 c         1888 g         1363 t
ORIGIN      
        1 ttttgcgttt gggatgatca aatcgggaaa tacaggattt gtttcgagcc agcggtgaat
       61 ctggtgagca ccggagacgc agattcggat gcaatcgcca acacagcggc ttttacccgg
      121 gttatcgagc gttatgtgag gcaatacccg gaccagtggc tgtgggttca tcgtagatgg
      181 aagacgcgcc cggctggcga gccgccgatc tattgaacgg tctctctctt tctgccgttc
      241 cattttttca cggcgatccc cgcccatacc aattccacca ggccgaaagg ccacgcaccc
      301 tgaaggaatc cgtaaattga gcccaggaca cacgcgccgg cgaaagccat tatccaaccg
      361 ggagcgcggt cttcaagcgc gtagaatgtt accatcgccg ttacggcaac cagcccgaac
      421 acgctgagcg gagtgacggc aaacatcgca tgcattctaa ccgttagccg atagcctggg
      481 actgcgatca ggacgggcag aaaaagtccc gttcgaggcg aaacggggcg tccttggaaa
      541 gccttttagg atctgccggc gtgcggctcg gctgtagcaa tgcctggggc gggcactgaa
      601 cggccggaat cttcagtctt ttcgtcttcg aagaacacgt gcaaatcacc tacgaaagcc
      661 agtatcgcga ctaccagcga acctataagg ccaacgaaaa aaatgatctc aagtactatc
      721 gccagataat ggagaaacat gactcgaacc cttctaaatc cattttcgag cgagatgccg
      781 taaaggagtc ataaagagag ccgcaagaat gtgtaaggaa tctgaagggt tgaagaacgg
      841 aacgctttga gataaatgag tttaaggatc acaaacgagc cgcgtcaatt tactattccg
      901 ggtcgaagcg atacccgatc cacggctccg ttttcaggta acgcggggcg cgtggattct
      961 cttccagctt ctttcgcaat gcgccgataa acacccgcag atactccggt tgttcagtgc
     1021 tgttactgcc ccaaacggcg gaaagaatcg ttttgtgcgt gaggactttg ccccgattcg
     1081 ccatgagaaa ttgcatgagg tcgaattctt taggcgtgag atggacaggt ctgctcttga
     1141 ccatcacgag gcgctggtca ggatcaatct tgaagtcgcc gacctcaaat cctgactcgg
     1201 tctccagcgg aggagcggaa cggcgcagca gcgctcgcac ccgtgcagtc agttcggcca
     1261 tgccaaacgg cttggctacg tagtcatcgg ccccgagatc aagtgcacgg accttggttg
     1321 gctcatcgtc gcgcaccgag agcacgagaa tgggaatgtc acttagctgg cggatgcgct
     1381 cgcataattc caggccattg aagccaggca tcgacaggtc ggaaatgacc agatcaggta
     1441 cccaggagcg aaaactctcg agcccagtcc tcccatcgtt cgcggtgcgc acctgatatc
     1501 cggcggactc caggccgcgc tggagcacgc gcgtgatctg cgcctcatcg tcgaccacca
     1561 ggatcttttt tgggtcgtcg ctcacgccgt atctcccgcg ggaaccgaga actgtacgcg
     1621 tgtaccctgt gttcctttac cgctttcaat ccagatcttg ccgcgatgcg cctctactat
     1681 gccgcgagct atcgcgagcc caacgccaaa gcctgggcgt ccgccggcac gcacaaactt
     1741 acggaagact tcatcgcgca tttccggggc aatgccggga ccctggtctg caatggagaa
     1801 gcataccgcg ccggagccgt tgcgggctgc ggaaacgcta atgggtgtgc ccggaggtga
     1861 atactttgca gcattctcaa tgatggtgaa cagtacctgc gaaatcaggc gcggatcggc
     1921 gctcagcttc ggcagccccg ggtccacctc ggcctccact ggatgattgg ccagcagggg
     1981 ctccgcccgc gccagtgcgt cttccatgat ttcatcagca gtcaccgcgc ggctctgcaa
     2041 tgagagctca ccggcctcaa gacgcgccag gtccatcatg ccctgaatga aatggttcag
     2101 ccggtcagct tcctggtcga tcacttcttc aagctcgcgc tgtactggct cagccacacc
     2161 gccgctgcgc agagttgtga tggcggcttt gatcgaggtc aacggagttc gcagatcatg
     2221 tgttaccgcg tccagaagcg cagtcttcag ttgctcgctc cgttgcagct cctcactttc
     2281 aattacgcgc cgctccagat gcgacgaaag atggcctacg agcacggccg ccacaacgaa
     2341 aacgacatag gcaatgatgt cctgtgtgcg atggatgcgc agcgaatata ccggcccgat
     2401 aaaaaagaag ttaaaaaata tgcccgctac aatggcgatg aagattgcag gtcctcttcc
     2461 tgcgcgtacc gcaacgaaaa tcaccagcag caccagcagc agcgcgacgg cagtttggtt
     2521 caggttctcc cgcaaaacgt gcgccagcgc cacggtcgca ctcagcgcaa tcagcgcgac
     2581 caggtaatga gcccagcggg gtagggaatg catcaggtac attctatcga ctgagcgtga
     2641 aagcagcctg aaatagatag ttggttaatc agcgctagga ggcgtacggc gggtaaatcg
     2701 ccggtgaaaa tcgcctttat aaaccctctg gaagctgcga aaatagagct atggcactgg
     2761 tggtggtcgg cggacactcg cgcaacgtag gcaaaaccag cgtggttgcc gggattattg
     2821 ccgcgctgcc ggaactgaac tggaccgcgc tcaagatcac gcagttcggt catggcatat
     2881 gctccgcaga cggcaagccc tgtgactgcg acaccggcga cgaccacttc cgagcgatca
     2941 gcgaagaacg cgacctgagc ggggaaaccg acagctcacg ctttctcacc gctggcgcac
     3001 gcaaggcttt atgggtacgt acccggcagg gtcggctggc tgaagccgtt ccggacatag
     3061 agcggaagat tgccggagcg gagaatgtaa ttatggaatc gaacagcatc gttcgcttcc
     3121 tcaagcccga tttgtatatt tcggttcttg atccggatac cgaagacttc aaagtctctg
     3181 ccatggacgc cctggatcgc gccgatgcat tgatcattca ctgtgacgtg cacaatggtg
     3241 gagcaacgga ccgctctccg cgctggcagt tcgtgaagcc ggagcatctt gccggcaagc
     3301 ccaccttcca cattcagcca ccgccctacg tgaccacgga gattgtagag tttgtgcgcg
     3361 cccgcctggc aacccagccg gtctcctgag cactgcagcc cgcgattgct ccggtgcatt
     3421 cgaacctctc actggccaaa ctggttgcgt gctatcctgc ccggcgcgag gtattcatgt
     3481 tcaaagagct ggcagcagcg tttctggttc tctcctctgc gttgatgagc gctcaggtgc
     3541 aacatacgcg cggcatggcc cacagcaccg atatcgacat tgcttatgaa actctgggac
     3601 ggcagggaag cgcgctgcca gtgttcgcaa tcaatggcgg accggggctc acgcacgcgt
     3661 atatggtgca gaacgatctg tgggagcggg cggcgcgtaa gcggctggtg gtgttctatg
     3721 atcagcgcgg aacgggcgcg tcaaagccga aagggacgat ggccgtctcg caaagtatcc
     3781 aggcgcaggt ggcggacctg gacgctgtgc ggcaggcgtt gaagctggag aagatcgcgc
     3841 tggtaggaga ttcctacggc gggctggtgg ccatggccta tgccgcagcc catccagagc
     3901 acgttacgaa gctagtgctg tcggattctc cgggaccttc atggaagagc attgtgcacc
     3961 tgttgcccga cgtttttccc gacgttggag agcaaaacga gcaggaaatg aagaagttgg
     4021 gcggcggcaa ttccggcgca caaccggggg atcagcagaa cgagattact cgccgggcca
     4081 accagaacga tgccgccgcg cgggccggcc tgcgcaacca tttcaaaatg attttctatt
     4141 ctccagagaa gcgcgacgcc tacatgagcg gcatgggcga tctcggttac gagccttcag
     4201 tcgctgaagc agtttcgaaa gcgactgaag gcctcgacct cagctcgaag ctgacggact
     4261 tcaaatttcc aacccttgta atcaatggtc gttatgacat gaacgtggcg ccgctcacgg
     4321 cgtggcgttt ggcccatgac atccccggag cgaaagtcgt ctttttcgaa aagagcggcc
     4381 acctgccatc gtatgaagaa ccggagaaat acctgcaagt gctggaggaa ttcctcggaa
     4441 ggtagcgctc agctgtcgaa aatattgaca ctctgtcctg cgcaacttaa actcccatgc
     4501 tcgcgggcgc ccttcatttt tgaagtctcg tctttttagc tcgagtcgtt tgttcaagat
     4561 atgtttctaa ccaaaaagag gagcacatcc atgaagtctt tgcgctttac tgttctggtc
     4621 tccgtcatca ctctggcctt tgcggcagtt ccgctgcata cgcaaatgct gcccaacccc
     4681 tacggcccac ccattagtct ggacagcgcg aagaagattg ccgccgcggc gctggcggaa
     4741 gctgcaaaga accactggaa catggctgtg gcaattgtgg acccgaacgg aacgttgatt
     4801 tactacgaga agatggacaa cacgcagatt ggcagcgcgc aggtctcgat caacaaagca
     4861 cgttcagcag ccttgtacaa gcggccgacc aaggcattcc aggacgcact cgccggcggc
     4921 ggcgccgggc tgcgcgtctt gaatcttgaa ggtgctgtgg cggtggaggg cggcgtgccg
     4981 ttgctggcgg atggcaagat tatcggcgcg gtcggcgttt ctggtgatac cagtgatcac
     5041 gatggccagt gtgcgcaggc cggagccgca agcctcagtc aagcgcaaca ctagttcgtg
     5101 catagaaaca gggagcaggt tgggccctgc tcccttgtcg agcgctgagg agacttgaga
     5161 gattactgca ctgtaaccgc tttactgttt ttgtaaatgt ttcctttgct gtcccacgcc
     5221 tgatacacca cgttatggga gccaaccggc aaggaaatcg tcttgtcgat tagcgcgcct
     5281 gagacgctcc ctttgtttac tccgttcacg taaattttca tcgcggtaat cgggttcgac
     5341 gccttcgcgc tggcggccag ccgcacggac gtgctggtta cggttgagct ggtcggcgcg
     5401 agaatcgtca cgctgttcgc tcccttgaag aactcagcca tggcaggcgc ggtttgtgct
     5461 gcgccgggga agctggtttc ttcacccaac agcatgagca tggtcttaag aacgctctgt
     5521 tgatggtaga gggagacgga cttgaagcca gccttcacct gtggaccgat catagtcacc
     5581 acgacgcggc ctccgcagcc agtagaaacc gtggcgctgc accgattgtc agtgttgaga
     5641 tcggcttcgt cagaccagat gatgagcacc ccgtcgccgc cgggttgaaa cggtggcgaa
     5701 gccagcagcg gcccgatatt ggctttgagc caggcatcag cggtctgctt gcaaacagtg
     5761 atgccgctgg ggcagttgtg cagatcatgg ttgccatccg gcgtgatgaa ggcaaagttc
     5821 ggcagcgtgt tgttggcaat gtctttggca aggtccgcac ttgactggtg gtctttgatc
     5881 aagctgcttt tggccatttc gttgtagtaa atcaggggag catggcgctt catataggcg
     5941 ccggagtaca ggccggtgta gccggcgtaa ggcagtgact gcgcgtaaga cttgaacgtc
     6001 atgcctttgg ccagcaggtg tcgctcgatg ttatcaacgc tgaaggttgc cgtggtcgag
     6061 ttgttgtgcg ttatgtactg gcccgcagtg accagcaaat aattctcgag cgacccgtgt
     6121 tcgttggcat agaactgggt tgcaagggcg cctttagcaa ttatgctgtt gagatacggc
     6181 atcgcagagc tgccgatgat ttcttcgtag ctgcggttct cttccgcaac aatgtagacg
     6241 tgctttgagc gagggacctg cgcgcccgca tgcgccacgg tgaccgacaa tccgaggccc
     6301 gccagcagca gcagaatccc agcatttatg attctggtga gcagttttgt acgattcatc
     6361 atgccccgca ctatggcgca aggcagagta ggtgcaaatc agcccggaaa cctaaaacgc
     6421 ctaaggttac agaacgctaa tttcctgtgg atttaagggg taagaatctg aaggcaaaga
     6481 atttagcaca tcca
//
LOCUS       DASQYP010000063        17710 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_67042, whole genome shotgun sequence.
ACCESSION   DASQYP010000063 DASQYP010000000
VERSION     DASQYP010000063.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 17710)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17710)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17710
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_67042"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..592
                     /locus_tag="VE783_01880"
     CDS             <1..592
                     /locus_tag="VE783_01880"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HYX52170.1"
                     /translation="LDKFQALDVIVNNAGYTWDGVVHKMTDQQWQAIVDCHLTAPFRI
                     VRAASSFIRETAKKEQAEKGKASPRKIIFISSTSGTRGNPGQANYSAGKSGVIGLAKT
                     IAKEWGMFNVQSNAVAFGWIDTRLTHAKEEQVKIKRGEVEIELGIPAERIQMMPKFIP
                     LGRAGTTHEAAGAVLFFASSLSDYVSGQVLEIAGGL"
     gene            618..1085
                     /locus_tag="VE783_01885"
     CDS             618..1085
                     /locus_tag="VE783_01885"
                     /inference="COORDINATES: protein motif:HMM:NF024844.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MaoC family dehydratase"
                     /protein_id="HYX52171.1"
                     /translation="MPKREFESLDALKQAIGHEVAVTDWFQMTQDRVQQFADATLDHQ
                     WIHVDVERAKRESPFKGPIAHGFLTLSMLAHFMHQAVGIKSGLRMGVNYGLNKVRFVS
                     PVRVGSNIRARFTLQAIKDVEPNGFEALYNATVESEGADKPALVAEWLVRYYK"
     gene            complement(1090..2157)
                     /locus_tag="VE783_01890"
     CDS             complement(1090..2157)
                     /locus_tag="VE783_01890"
                     /inference="COORDINATES: protein motif:HMM:NF013775.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphotransferase family protein"
                     /protein_id="HYX52172.1"
                     /translation="MSGDFLDHSSSIRSGEELDLARLGPYLREHFPDVAGPLAVKQFP
                     SGHSNLTYSIALGEKQMVLRRPPFGSKVRSAHDMGREFHVLSKLHGHFPAPQPLLHCT
                     DDSILGAPFYVMERVRGVVLRRNLPEGFQLSPEKARGLSAAFIDNLAALHRLDYKAIG
                     LGDLGKPDGYLQRQVKGWIERYYGSKTHELPEVARLADWLNANMPQQSGATLIHNDYK
                     YDNVVLDETEITHIHAVLDWEMCTVGDPLTDIGTALAYWVNADDPPYLKMVRWGPTHV
                     PGSLTRRELAERYAQKTGRDLSQIVFYYVFALFKVAVIIQQIYYRYFHGLTKDQRFAS
                     LGEVTKMLLGVAVKAIEGAQL"
     gene            complement(2163..3368)
                     /locus_tag="VE783_01895"
     CDS             complement(2163..3368)
                     /locus_tag="VE783_01895"
                     /inference="COORDINATES: protein motif:HMM:NF012656.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HYX52173.1"
                     /translation="MDFSISPQMQKTLADIQQFMEREVYPLEPEVATKGYRASLPKLK
                     AARQKVKDLGLWCPQISKEYGGMGLDLMEHGMVSSVLGRSLLGHYIFNCQAPDAGNME
                     ILIEHGTQEQKKAFLEPLLRGDIRSCFAMTEPEHAGSNPTWMSTTAVKEGSDYVINGH
                     KWFASSADGATFAVTMAVTNPDAPPHQRASQILVPTNTPGFRIVKNLSVMGHVGEDHA
                     SHAEVRFENCRVPQKNLLGKEGAGFAIAQERLGAGRIHHCMRWLGLCERAYDLMCKRA
                     AERELAPGKPLGTRQIVQAWIAESRAEINAARLMVLEAAWKIQQHGQRNAREEISCIK
                     FYVAGVLLNVLDRAIQTHGGMGLTTETPLAAFWAAERGARIYDGPDEVHKMVVARQAL
                     KKYGVQVST"
     gene            complement(3384..4100)
                     /locus_tag="VE783_01900"
     CDS             complement(3384..4100)
                     /locus_tag="VE783_01900"
                     /EC_number="3.1.3.-"
                     /inference="COORDINATES: protein motif:HMM:NF012521.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine phosphatase family protein"
                     /protein_id="HYX52174.1"
                     /translation="MSYLLLVRHGQASFLEENYDKLSLKGEQQARMLGEYWARHKFEF
                     DHVYSGPRARQQDTARIAGEAMRSAGLGWPKVEILPEFDEFRAEAVVAQTLPGLMESD
                     PGVRALYQDFEKAEGQAARFKTFQRVFEVIVHRWAHGELPAPEIEPWSAFCDRIHGAL
                     ARLCGEPSGRRVVVFSSGGPTAVAMQRALDLSTENTLRTAWMVPNTAYSVFVFSRNRF
                     TLSSYNSYPHITDSEFLTYR"
     gene            complement(4199..6013)
                     /locus_tag="VE783_01905"
     CDS             complement(4199..6013)
                     /locus_tag="VE783_01905"
                     /inference="COORDINATES: protein motif:HMM:TIGR03436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VWA domain-containing protein"
                     /protein_id="HYX52175.1"
                     /translation="MKSIVRGLVVLFYLLICLASSIHSQSDSKQPAGKNSKEQLPTLK
                     VATRLVVVDVVATDHKGNAIPDLKPDDFTVLEENRQQNIKVFAFADASKMAADDPPPM
                     ALPLNRYTNVPRFRPHGPVTVILLDGINTHSMNQGYVKEEMLKLLPKLPSGQPVAVYA
                     LGLKLRLLQDFTTDPALLRAAIDKKGASLKPLGDPSDSVTRDLGPAVMENMPDLMRQQ
                     VLAFERESVANQMDLRVELTLSQLRALARNLAGVAGRKNLVWLSESFPAYLYTVAAAA
                     NGNFSGPGTVNSASRPYYDTIEKTSDLLANAQVAVYPVDARGISNDDPYAQLSNSDGQ
                     GNYLGRSSMGMVSGARGSGTMTELGVSSDARMSSHTTMNDVADLTGGKAFYNTNNLTD
                     AVRQGIQDGSAYYTLGYYPDNKDWNGRFRKITVTTRRPRVKLRFRQGYFAVDPYASAH
                     MNENQRAQELGEVMNLDFPASTALTFQAAVIPPSTANRNTVVNFAIDSHKLVFESGDD
                     GKQHAAVECAVRVFDSKDNIVQTRGNTLNAALPPEQYQLVMKKFMPCSQALDLPAGKY
                     LLRLAVRDNTSGLIGSTNASLTIAEASASAAPPADKKN"
     gene            complement(6140..6943)
                     /locus_tag="VE783_01910"
     CDS             complement(6140..6943)
                     /locus_tag="VE783_01910"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52176.1"
                     /translation="MNRLTSIAAVGVAVLVLSPLQAQMRGGRGPVSSPRVSSGPRAGS
                     GFRGGPVAPPRFAPGSFGTPARFARGPVVVPNHGFGSFRTGGGVFFNNRGFHHHHNNF
                     ISPFGCFGFNCGGLLLGGGFFLGGAPYYGAYYPGYYPLFPEDYSYPQQQPQQIIVSGD
                     NQNSALTMEIQRLSDEVQDLRDQQQRQYEDSRRPAPPPAVTNVLPAVPALFVFKDGRR
                     VSAKNYAIAGQTLWILDEHNARKYQVSELDRDATERANAPNGIELRIPQ"
     gene            7148..8110
                     /locus_tag="VE783_01915"
     CDS             7148..8110
                     /locus_tag="VE783_01915"
                     /inference="COORDINATES: protein motif:HMM:TIGR01250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="proline iminopeptidase-family hydrolase"
                     /protein_id="HYX52177.1"
                     /translation="MSVTRERQQKNVMTTVEGANIYKQEEGFVDASGVLIYYKTIGRG
                     TPLMILHGGPGASHDYLLPYLLPLARTNRLVFIDERGSGRSEKLQDTTQYTIENMVED
                     VEAVRQTLALGKIALMGHSFGGVLAQAYALKYQQNLARLILAGTFSSTTEMNKVLARE
                     KQSMPPAELKKLQELEKAGLFGKGKPWEQRRYPEEYARLAWGDGYFPYLYGARPDPNY
                     DPLSGNTTTSWELYREMWGSDGEFVIDGNLKTVEYTARLSTIKLPTLIICGDHDEVDP
                     LLSRAMHEKIAGSKLAIMPNSGHLAFVDQPKLYIQSVNEFLHGK"
     gene            complement(8115..9728)
                     /locus_tag="VE783_01920"
     CDS             complement(8115..9728)
                     /locus_tag="VE783_01920"
                     /EC_number="1.1.99.1"
                     /inference="COORDINATES: protein motif:HMM:NF002550.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016614 - oxidoreductase activity, acting
                     on CH-OH group of donors [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="choline dehydrogenase"
                     /protein_id="HYX52178.1"
                     /translation="MFDYIIIGAGSAGCVMANRLSQDPTVKVLLLEAGGQDTQKEIHI
                     PAAFSKLFKTASDWAYYTEPEAACANRSMYWPRGKVMGGCSSMNAMIYIRGHRYDYDH
                     WRDLGNPGWAYADVLPSFKKSEANENGASEYHGGDGPLHVTNLRSPNPLGHAFVEAAE
                     QSGFKRNPDFNGASQEGFGPYQVTQFEGKRCSTTAAFLQPIRKRPNLTIKSTAQVFDI
                     IFEGRRAIAVSYQHRDGSAQEHAEREIILCAGAIGSPQLLMLAGIGPADHLRSLNIPV
                     TCNLPGVGSNLQDHPAVPVVFQCTQPITLASAESASSLARYLCTKKGMLTSNVAEAGG
                     FVSVGGDSPAPNLQFHFAPGYFVDHGFQKFTGHAVTFGPTMIRPRSRGRITLRSSNPL
                     DAPVIKANYFSDPYDLDVMLEGVKLSRKLASAPAFQKYIGREMHPGPDALDDLALRAH
                     IAKFAATLYHPVGTCKMGNDAGAVVDSELRVHGLEGLRVVDASIMPTVIGGNTNAPTI
                     MIAEKAADLIRSGGKRSTTADPVLAGTRS"
     gene            9884..10786
                     /locus_tag="VE783_01925"
     CDS             9884..10786
                     /locus_tag="VE783_01925"
                     /inference="COORDINATES: protein motif:HMM:NF019843.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HYX52179.1"
                     /translation="MAWSRVLAAAILITASALGAQETPQGLQRKMRLLDENEVRIVLN
                     RAEEGNPVSQLWAGLIYDLGQHVTADHKTAAQYYAKAASQGSAPAAFLLADMYLKGSA
                     LEKDPAKALQLYKQAADAEYGPAMTALANIYVSGGAPEQSVAEAFKLLTRAAKQGEPE
                     AEYKLGLMYRDGQGTNRDCELAIKWIVAAANQKYAPAQAGVGDVYSSGTCVPQDYARA
                     AKVYELAANQNEAAAAAKLGELYADGHGVKQDPETAYKWFTIAKAEGIASDRQEKLRS
                     QLSKDQIGAAETAAEVWIKAHKKE"
     gene            complement(10854..11417)
                     /locus_tag="VE783_01930"
     CDS             complement(10854..11417)
                     /locus_tag="VE783_01930"
                     /inference="COORDINATES: protein motif:HMM:NF014038.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class IV adenylate cyclase"
                     /protein_id="HYX52180.1"
                     /translation="MAANDNHEVEIKFRIQDLNELTARLSSAGFHEVTARTHEKNTLY
                     DLPGDPLRKRGALLRLREYGPKWTVTYKDKPSVSGPHKSRREIETDVTNGPALAAMLE
                     ALGYQPRFTYEKFRREWTDGSGHVVIDETLIGNFGEIEGQPAWIDRTAQLLEIAKSEY
                     ITLSYTELFFRWKAETGSTIDNMVFGS"
     gene            complement(11443..12621)
                     /locus_tag="VE783_01935"
     CDS             complement(11443..12621)
                     /locus_tag="VE783_01935"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR01930.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006635 - fatty acid beta-oxidation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiolase family protein"
                     /protein_id="HYX52181.1"
                     /translation="MADVFILSAVRTPIGKFGGKLANLSSPDMGVIAAKAALERAAVD
                     PGRVEEAIFGCARQAGNGPNPARQISIRSGAPKEAPAYTVNQACASGMKAIALGYQEI
                     LAGNMECVLTGGSESMSRVPDYLDGGRWGYRLGNQELVDGLYRDGFLCQICKLVMGET
                     AELLAQQYHIPRDEQDQFALRSQKRAESAIKSARFQDEIVRVKLQTKKGEETFQQDEH
                     PFLGASMEKMAKLSPVFSKTGTVTAGNSSGITDGAAAVVLAGEEFVGRNNLKPLARIM
                     GVTSAGVDPSTMGVGPVPAVAKLEKKLGMKLADFDLIELNEAFAAQVLACDREMHMDP
                     EKLNVNGGSIALGHPIGCTGTRITATLLHEMRRRNAKRGLATLCVSGGMGMALGLELA
                     "
     gene            12996..13514
                     /locus_tag="VE783_01940"
     CDS             12996..13514
                     /locus_tag="VE783_01940"
                     /inference="COORDINATES: protein motif:HMM:TIGR00413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septal ring lytic transglycosylase RlpA family
                     protein"
                     /protein_id="HYX52182.1"
                     /translation="MKRVLSILAVAGFMATNVGAAPVPNHRQQQPQDKAATDKKVAVS
                     AKTEKSLTPKAVAAKSAAKPYQVGNASWYGKQFHGKQTASGEDFDMFELTAAHRQLPL
                     GTYVKVTNLRNGKWIIVRVNDRGPYVGNRIMDLSYSAARMLNFYGGIEKVRIDLVQPT
                     TMAANQPAVGAP"
     gene            13544..14287
                     /gene="pyrF"
                     /locus_tag="VE783_01945"
     CDS             13544..14287
                     /gene="pyrF"
                     /locus_tag="VE783_01945"
                     /EC_number="4.1.1.23"
                     /inference="COORDINATES: protein motif:HMM:NF001273.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004590 - orotidine-5'-phosphate
                     decarboxylase activity [Evidence IEA];
                     GO_process: GO:0006207 - 'de novo' pyrimidine nucleobase
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0044205 - 'de novo' UMP biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="orotidine-5'-phosphate decarboxylase"
                     /protein_id="HYX52183.1"
                     /translation="MSPQNPEITTAAAPLQTRDRLIVALDVSTAREAGELVRRVGDAA
                     GLFKVGLQLFANEGPALVREMIASGHRVFLDLKLHDIPNTVSHAVKAAAELRVDMLTV
                     HASGGRAMLRAATEAAGRVNLLAVTVLTSFAEPDLNEVGVPGEIAPQALRMAELARQS
                     GIRGVVSSPREASLLRKNLGEDFLIVTPGIRPAGADVNDQQRIATPASALAAGASHLV
                     VGRPITHAADPARAAREIVEEMAGVQAAV"
     gene            14364..15191
                     /locus_tag="VE783_01950"
     CDS             14364..15191
                     /locus_tag="VE783_01950"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52184.1"
                     /translation="MRSLAVFAIFTALSLSAQNAPAPQTDHPSGAAPLSSAQPAQPQQ
                     ITDQPPAQPANDGRHVTVPAGTEVLLQLKSAIDSRNNHVGDGVYCQTSFPVTVGNVIA
                     IPAGTYVKGEIVKLQRAGRVKGRGEVLFKFNSMIFPNGYTVDMPGSVHNDSGTSAASV
                     DKEGKIKADGSVGKDVETVAKGGAYGLGGGTIATGTLNGARIGGGIGLAAGLATVLLT
                     RGNEVRIEPGASFRMVTQLPLTVDIVGVDPNRMATETVPRPTVNNRLPQPAASSNPK"
     gene            complement(15201..16130)
                     /locus_tag="VE783_01955"
     CDS             complement(15201..16130)
                     /locus_tag="VE783_01955"
                     /inference="COORDINATES: protein motif:HMM:NF024583.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain S-box protein"
                     /protein_id="HYX52185.1"
                     /translation="MESPAPHYREAEFFRISVSITQILAESTDSNECTFAITSLLGIS
                     FGWDIGFLWVVDDATLHLRCNSAWNSVNAAQFESVSRSRTFGPGEGLPGRAWLERQTV
                     WLNDLRSEMNFPRNSVAQLEGVRSGVAFPLYAQSGVLGVLELFSREQRDQDSQLANFF
                     YYAGGQIGVFLERARIKSEMKSLDAELRLLASGSADAVLTIDENSTVLYANPKVLEVF
                     GYQPEELIGQNLTMLIPEPLRGHHHAGLKHYRETGKRRIPWEGVGLTAKHKDGREIPV
                     EISFGEFSRQGRRIFTGFARLKTKTSAAGQAMS"
     gene            16570..>17710
                     /locus_tag="VE783_01960"
     CDS             16570..>17710
                     /locus_tag="VE783_01960"
                     /inference="COORDINATES: protein motif:HMM:NF025092.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxypeptidase-like regulatory
                     domain-containing protein"
                     /protein_id="HYX52186.1"
                     /translation="MHRKVATFPWILLLILSWVSVAAFGQTTASIKGTVTDASGAAVS
                     GATVTVKNPDLGIERTTQSNSAGDYEVPALPPGTYSVQVQGKGFETQIAKEVILAVSK
                     NSVQNFNLKVASTSEVVTVEATAPIIEATTMTVGQTIDQRTVQEIPLNGRHFVDLALL
                     IPGTVTPPQNGFLTAPLRGQGSFAFNTAGNREDAVNFMINGINLNDMVQNQVTFQPTI
                     NTVSEFKVDNSTYSAEYGRNSGAIVNIATRSGTNQFHGELYDYLRNDFFDARNAFNRT
                     TVVTNGVTVPNPIASFKRNQFGGDFGGPIYHDKTFFFLSYEGLRQRQGLPFAANVLDD
                     PTRAAILAGTNPVAKSLTNLLPAANGTLNNAPAFLGSGVAPVDIDQ"
BASE COUNT         3889 a         4883 c         5249 g         3689 t
ORIGIN      
        1 actcgataag tttcaggcgc tcgatgtgat cgtgaataac gccggctaca cctgggacgg
       61 cgtggtgcac aaaatgaccg accaacaatg gcaggcgatt gttgattgcc atctcactgc
      121 gcccttccgc attgtgcgcg ccgcttcaag ctttatccgc gagacggcaa aaaaggaaca
      181 agcggaaaag ggaaaagcca gtccgcgcaa gatcatcttc atcagttcga cttcaggcac
      241 acgcggcaat ccggggcagg caaactactc cgccggcaaa tcgggcgtga ttggactagc
      301 caagaccatt gccaaagaat ggggcatgtt caacgtgcag tcgaacgccg ttgctttcgg
      361 ctggattgat acgcggctta cgcatgccaa ggaagagcag gtcaagatca agcgcggaga
      421 ggttgagatc gagttgggca ttccggccga gcgaatccag atgatgccca aattcatacc
      481 tctggggcgc gcgggaacta cgcacgaagc cgcgggcgcc gtgctgttct ttgcttcatc
      541 gctttccgat tacgtatcag gacaggtgct ggagatcgcc ggcggtctgt gatcccgtcg
      601 cccagaggag atgactgatg cccaagaggg aatttgaatc gctcgacgcg ctcaagcagg
      661 caattggcca cgaagtcgcg gtgacggact ggttccagat gacgcaggac cgggttcagc
      721 aatttgccga tgccacgctt gatcatcagt ggatccacgt ggacgtggag cgcgcgaaac
      781 gcgagtcgcc ctttaaaggg ccgattgcgc acggttttct aacgctctcc atgctggcgc
      841 atttcatgca ccaggcggtg gggatcaaga gcggcctgcg catgggcgta aattacgggc
      901 tcaataaagt ccgctttgtc tcgccggtgc gcgtgggatc gaacatccgg gcacgtttca
      961 cgctacaggc gatcaaagac gtggagccaa acggttttga ggcgctttac aacgccacgg
     1021 tggaaagcga aggcgccgac aaaccggcgc tggttgcgga gtggctggtg aggtactaca
     1081 agtagagagc tacagctgtg caccttctat cgccttcacg gccacgccca acagcatttt
     1141 tgtgacttca cccagactag cgaagcgctg gtcttttgtg agtccgtgga agtagcggta
     1201 atagatctgc tggatgatta ccgctacttt gaacagcgcg aaaacgtaat agaagacaat
     1261 ttgcgaaaga tcgcggccgg tcttctgcgc ataacgctcg gctagctccc ggcgcgtgag
     1321 gctgccgggc acgtgcgtcg gtccccagcg aaccatcttc aggtagggcg gatcgtcggc
     1381 gtttacccag taagccagcg ccgttccaat atcggtgagc ggatcgccaa ccgtgcacat
     1441 ctcccagtcg agcaccgcgt gtatgtgcgt gatctcggtt tcgtccagca ccacgttgtc
     1501 gtacttgtaa tcgttgtgga tcagcgtggc gccgctctgc tgcggcatgt tggcgttgag
     1561 ccagtcggcg agccgcgcca cctcaggcag ttcgtgcgtc ttcgatccgt agtagcgctc
     1621 aatccatcct ttcacctgcc tttgcagata gccgtcgggt ttacccagat ctcccaggcc
     1681 aatcgctttg tagtccagcc tgtgcaacgc agcaaggttg tcaatgaatg ctgcgctgag
     1741 gccgcgcgcc ttttccggag aaagctgaaa cccttccggc aggttgcgac ggaggaccac
     1801 gccgcggacg cgttccatca cgtagaaagg cgcaccaaga atggagtcgt ccgtgcagtg
     1861 cagcagtggc tgcggagcag ggaagtggcc gtgcagtttg gagagcacgt gaaactcgcg
     1921 gcccatgtcg tgcgcggacc tcaccttgct tccaaaaggc gggcggcgca gcaccatctg
     1981 cttttcgcca agggcaatgg agtaagtcag gttggagtgc ccgctgggga actgtttgac
     2041 tgccagcgga ccggcaacgt cagggaagtg ctcgcgcaga taaggcccca gccgggcaag
     2101 atcaagttcc tcgccactgc gaatcgagct ggagtgatcc aggaagtcgc cagacatgtg
     2161 atttaggtgg agacctgcac tccgtatttc ttcaacgcct ggcgcgccac caccatctta
     2221 tggacctcat ccggcccgtc gtagatgcgc gcgccacgct cagctgccca gaacgctgca
     2281 aggggcgtct ccgttgttaa ccccataccg ccgtgcgtct ggatggcgcg atcgagcacg
     2341 ttcagcagca cgccggcaac gtaaaacttg atgcaggaga tttcctcgcg cgcgttgcgt
     2401 tgtccgtgct gctggatctt ccatgccgct tccagcacca tcaggcgggc ggcgttgatt
     2461 tcggcgcggc tctcggcaat ccatgcctgc acgatctgtc gcgtgcccag cggcttgccc
     2521 ggagccagtt cacgttcagc ggcgcgcttg cacatcaagt cataagcgcg ctcacacagg
     2581 ccgagccagc gcatgcagtg gtggattcgt ccggcgccga gccgttcctg ggcgatggca
     2641 aagcctgcgc cttctttgcc cagcaggttc ttctgcggaa cgcggcagtt ctcaaagcgg
     2701 acttcggcgt ggctggcatg gtcctcccca acatggccca tcacgctcag gtttttcacg
     2761 atcctgaatc ccggcgtgtt cgtaggcacc agaatctggc tcgcgcgttg gtgcggagga
     2821 gcatcgggat tggttactgc catggtcacg gcgaaggtgg cgccatcggc ggaagacgca
     2881 aaccacttgt ggccgttgat cacatagtcg ctaccctctt ttacggcggt ggtgctcatc
     2941 catgtgggat tcgagccggc gtgttcgggc tccgtcatgg caaagcagct gcggatatct
     3001 ccgcgcagca gcggctctag aaaagctttc ttctgctcct gcgttccgtg ctcgatcaga
     3061 atttccatat tgccggcatc gggtgcctgg caattaaaga tgtagtggcc aagcaggctg
     3121 cggcccagaa cggagctgac catgccgtgc tccatcaggt ccagccccat tccgccgtat
     3181 tctttcgaga tctgaggaca ccacaagcca aggtccttta ctttttgccg cgcagctttc
     3241 aatttcggga gtgaggcccg gtagcccttg gtcgccactt cgggttccaa tgggtaaact
     3301 tcgcgctcca tgaactgttg aatgtctgcg agcgtcttct gcatctgcgg agatatggaa
     3361 aagtccattg cgcctcccgg cttttacctg taggtcagga actcgctgtc agtgatatgc
     3421 ggataagaat tatatgagct tagcgtgaag cggttgcggg aaaacacaaa cacgctatat
     3481 gccgtgttgg gaaccatcca ggcggtacgc agcgtatttt ctgtgctcag gtcgagcgcc
     3541 cgctgcatcg cgaccgcagt tggccctccc gagctgaaaa cgacaacccg tcgcccgctg
     3601 ggctcgccac agaggcgcgc cagggcgccg tgaatgcggt cacagaatgc cgaccacggc
     3661 tcaatttccg gcgccggcag ctcgccgtgt gcccagcgat ggacgatgac ttcgaatact
     3721 cgctggaagg tcttaaatcg cgccgcctgc ccttcggctt tctcaaagtc ctgatagagc
     3781 gcgcgcacgc cgggatcgct ctccatcagg cctggcagcg tctgcgcaac cacggcttcg
     3841 gcgcggaatt catcgaactc gggcaggatt tcgaccttcg gccagcccag accggcggag
     3901 cgcatggctt cgcccgcgat gcgggcagta tcctgctggc gcgcgcgcgg tccggagtaa
     3961 acatggtcaa attcgaattt gtgacgggcc cagtactcgc ccagcatgcg ggcctgctgc
     4021 tcgcccttca gcgacagctt gtcatagttt tcctcgagga aagacgcctg tccatggcgt
     4081 acaagcaaga gatagctcat gaaattaata tcgtgtgtct tcgaaagaaa ggaaacggca
     4141 gaggatatca cacccgcgtt gagcaggaaa tctcacatcg tgggtgtgac aaaggcagtt
     4201 agtttttctt gtcagcaggc ggagcagcag aagcagacgc ttcagcgata gttaggctgg
     4261 cattggtgct gccaatcagg ccactcgtgt tgtcgcgaac ggcaagtcgc agcagatatt
     4321 tgccggctgg aagatccagg gcctggctgc acggcatgaa cttcttcatg acgagctgat
     4381 attgttccgg cggcagcgcg gcattcagcg tgtttccgcg cgtctggacg atgttatctt
     4441 tggaatcgaa cactcgaacg gcacactcga cggcagcatg ctgtttacca tcatcgcccg
     4501 attcgaaaac aagcttatgc gagtcgatag caaaattgac gaccgtattc cggttggccg
     4561 tgctcggcgg tatcactgcc gcctgaaacg tgagcgccgt ggaagcggga aagtccaaat
     4621 tcattacctc gccaagctct tgcgcccgct ggttctcatt catgtgagct gacgcgtagg
     4681 gatctaccgc aaaatagccc tgccggaagc ggagtttgac ccgaggacgc cgggtagtga
     4741 cagttatctt gcggaatctt ccgttccagt ccttattgtc cggataatat ccaagcgtgt
     4801 aataagcgga gccgtcctga atgccctggc gcaccgcatc ggtgagattg ttggtgttgt
     4861 agaacgcttt gccgccggta agatcagcaa cgtcattcat ggtggtgtga gagctcatcc
     4921 gcgcgtcgga cgagacccct agctctgtca ttgttcctga tccgcgagct ccgctgacca
     4981 ttcccatgga actacggcca agatagttgc cttgcccatc gctgttgctg agctgtgcgt
     5041 aaggatcatc attgctgatg ccgcgggcat ccacggggta aaccgcaacc tgggcattgg
     5101 ctaggaggtc agaggttttt tcgatggtgt catagtatgg cctgctggcg ctgttcacgg
     5161 taccgggacc ggagaagttt ccgtttgcgg cagcagcaac ggtgtaaagg taggccggaa
     5221 agctttcgga tagccagacc aggttttttc tacccgccac gccggcgaga ttccgtgcca
     5281 aggcacgcaa ttgagaaagg gtcagttcca cgcgcaaatc catctggttg gcgacgctct
     5341 ctcgctcgaa agcgagcacc tgctgccgca tcaggtccgg catgttctcc atgactgcgg
     5401 gaccaagatc ccgagtgacc gaatccgagg gatctcccaa cggcttgaga gaggcgcctt
     5461 tcttgtctat ggcagccctg agcagcgcgg ggtcggtggt aaagtcctga aggagacgca
     5521 gcttgagtcc aagggcataa actgccaccg gttgacccga cggcagcttt ggtagcagct
     5581 tcagcatctc ctctttgacg tatccctgat tcattgagtg ggtatttatc ccgtccagca
     5641 aaattacggt gactggtccg tgcggcctga atcgaggaac attggtatac cgattcagcg
     5701 gaagggccat gggaggcgga tcgtcagcgg ccatctttga agcgtccgcg aaagcaaaga
     5761 cttttatgtt ctgctggcga ttctcttcga ggaccgtgaa atcatccggc ttcaggtcag
     5821 gtatagcatt ccccttatga tcggtcgcta ccacgtctac gacgacgagt cgggtcgcca
     5881 cctttaacgt ggggagctgt tccttagaat tcttgcccgc aggctgtttg ctatcagact
     5941 gtgaatggat ggaagaagcc aggcaaatta gcagatagaa gagaacaacc agaccccgaa
     6001 ctatcgattt cacgaaataa cctccgcatc tgcggaccag agctgaatcg ctggccatgg
     6061 tagcagatca ggctgcgcac aaaaataaaa aaaacctcga acagcagtgt ccgaggtttt
     6121 aggagattgg gtaaggatgc tactgaggaa ttcgcaactc gattccgttc ggtgcgttgg
     6181 cccgctccgt agcgtcacga tccagttcag aaacctgata cttgcgggcg ttgtgctcgt
     6241 cgagtatcca gagcgtctgt ccggcaatcg catagttctt ggctgaaacg cggcggccat
     6301 ctttgaacac aaacagagca ggtaccgcag gcaggacatt tgtgaccgcc ggaggtggcg
     6361 cgggacggcg cgagtcttca tattggcgtt gctgctgatc gcggaggtcc tgcacttcgt
     6421 ccgagagccg ctgtatttcc atggtcaacg cagagttctg gttgtcgccg ctcacaatga
     6481 tctgttgtgg ctgctgctgg ggataggagt agtcttccgg gaagagcgga tagtatccgg
     6541 gatagtaagc gccatagtaa ggagcgccac ctaggaagaa gcctccgcca aggagaagtc
     6601 ctccgcagtt aaagccaaag cacccgaacg gcgaaataaa gttgttgtgg tgatgatgga
     6661 agcctcggtt gttgaagaac actccgccgc ctgtccggaa actcccaaag ccatgattgg
     6721 gtaccaccac cgggccgcgc gcgaaccggg caggagttcc gaatgagccc ggcgcgaagc
     6781 gcgggggcgc tacaggtcca ccgcgaaatc cggagccggc gcgcgggccg gaagaaactc
     6841 tgggtgacga gactgggccg cgacctccac gcatctgtgc ttgcagcggg gagagaacga
     6901 gcacggccac tccaactgcc gcgatggatg tgagcctgtt catatctata ttttatctcc
     6961 gttctgagaa cgggggccgg gaactatttg tgcaatgttt tcaatcacgt ggcggctgtg
     7021 cgcgaggact ataatgccgc gcatgagaac tcaggcactt attttggctg tgctgtcgat
     7081 aacaagtttc gttccggcac agacgaaaaa atccgcgcag cagccaacaa ccccctcctc
     7141 ggcaaccatg agtgttaccc gagagcgcca gcaaaagaac gtaatgacca cggtggaagg
     7201 cgcgaatatc tacaaacagg aagaaggatt cgtcgatgcc agcggtgtgc tgatctatta
     7261 caagaccatt gggcgtggca cgccgctgat gatcctgcac ggaggacccg gagcatccca
     7321 tgactacctt ctgccctacc tgctcccgct cgctcgcact aataggctgg ttttcattga
     7381 cgagcgcggc tccggacgct cagagaagtt gcaggacacc acgcaatata ccatcgaaaa
     7441 catggttgaa gatgtggaag ccgtgcgcca gacgctcgcg ctgggaaaga ttgccctcat
     7501 ggggcattct ttcggaggag tactggcaca ggcctatgcg ctcaagtacc agcagaacct
     7561 tgcgcgactg attctggcgg gcacattttc gagcaccaca gaaatgaaca aggtgctggc
     7621 tcgtgagaag caatccatgc cacctgcaga gctaaagaaa ctccaggagc ttgagaaggc
     7681 tggtttgttc ggcaaaggta aaccgtggga gcagaggcga tatccggaag aatacgcccg
     7741 gctggcctgg ggggacggct atttcccgta tctctacggc gcgcgaccag acccgaacta
     7801 cgatcccctg tcaggaaaca caacaacatc gtgggagctg taccgcgaga tgtggggatc
     7861 cgatggcgag ttcgtcatcg atggcaattt gaaaacggtg gaatacacgg cgaggctgtc
     7921 cacaatcaag cttcctacgc tgatcatctg cggcgatcac gacgaagtag atccgttact
     7981 ctcgcgggca atgcatgaga agatcgcagg atcgaagctc gcaatcatgc cgaactccgg
     8041 tcatctggcg tttgtggacc agccgaagct ctacattcaa tcggtgaacg agttcctgca
     8101 cggaaagtag tggcctagga gcgggttccg gcgagcactg ggtccgcagt agtgctgcgt
     8161 tttccgcccg acctgatcag gtcagcagct ttttcggcga tcatgatcgt gggagcgttc
     8221 gtgttgccgc cgatgacggt cggcatgatg gaagcgtcca ccacgcgcag gccttccagg
     8281 ccatggacgc gcagctcgga atcgacgact gctccggcgt cgttccccat cttgcaggtg
     8341 ccaacgggat ggtacagggt ggccgcaaac tttgcgatgt gggcgcgcaa ggcaagatcg
     8401 tccaacgcat ccggtccggg gtgcatctct cgcccaatgt acttttgaaa ggcgggcgca
     8461 gaagccagct tgcgggagag tttcacgcct tcgagcatta cgtcgagatc gtagggatca
     8521 gagaaatagt ttgccttgat taccggagca tccagcggat tgctggaacg cagcgtgatt
     8581 cggccacggc tgcgcgggcg gatcatggtg gggccaaagg tgacagcatg ccctgtgaac
     8641 ttctggaagc catggtcgac aaaatagccg ggagcaaagt ggaattgaag gttgggcgca
     8701 ggagagtcgc cgcctacgga gacaaaaccc ccggcttcag caacgttgga cgtcagcatg
     8761 ccctttttcg tgcagagata gcgcgccagg ctgctcgcgg attccgcact ggccagtgtg
     8821 atgggttgcg tgcattgaaa aacaactggc acagcgggat gatcctggag atttgatccg
     8881 acgcccggca ggttgcacgt aaccggaatg ttgaggctgc gcagatggtc tgccgggccg
     8941 atgccagcca gcataagcag ttgcggagag ccaatggcgc cggcgcatag gatgatctcc
     9001 cgctcggcat gctcctgcgc gctgccatct ctgtgctgat agcttacggc gatggcgcgg
     9061 cgaccttcaa aaataatgtc gaagacctgc gccgtgctct tgatggtgag attaggacgt
     9121 ttcctgatcg gctggaggaa agccgccgtg gtactgcacc gtttaccttc gaactgggta
     9181 acctgatacg gcccgaagcc ttcctgagat gcgccgttga aatccggatt ccgcttgaat
     9241 ccgctctgct ctgccgcttc cacaaatgcg tggcccaggg gattgggtga tcgcaggttg
     9301 gtgacgtgaa gggggccatc gccgccgtgg tattccgagg cgccgttttc gttggcctcc
     9361 gacttcttga aagagggcag aacatccgcg taggcccatc cgggatttcc cagatcacgc
     9421 cagtgatcgt aatcgtagcg atgcccgcgg atatagatca ttgcgttcat ggagctgcaa
     9481 ccgcccatta cctttccgcg cggccaatac atgctgcggt tggcgcatgc cgcttcaggt
     9541 tcggtgtagt aagcccagtc agatgcggtc ttgaagagct tggagaaagc cgcaggaatg
     9601 tgaatttctt tttgtgtgtc ctggccgccc gcttccagca gcaagacttt cacagtgggg
     9661 tcttggctga gcctgttggc catgacacag ccggcagaac ctgcgccgat aatgatgtag
     9721 tcgaacatcc ggggctcctg cggtttacga ttgtagtacc aaacacagcg gcaacgaggt
     9781 aatagttgcg aacggcatct ctcaatcgga tcggaaagca tctgatcgtc gtagtcggac
     9841 gaacgagtga agcgaaatga gaactggaag aacattccgg agcgtggcat ggagcagagt
     9901 gctggctgca gccatcctga taaccgcgag tgctctaggc gcacaggaga ctccgcaggg
     9961 tctgcagcgc aaaatgcggc tgctggatga aaatgaagtg cgtatagtgc tgaaccgggc
    10021 tgaagaagga aatccggtga gccagttgtg ggccgggctg atctacgatt tgggccagca
    10081 cgtaacggcc gaccacaaga ccgctgctca atactatgcc aaggcggcga gccagggctc
    10141 agctccggcg gcgttcctgc tggctgacat gtatttgaaa ggttctgcgc tggagaagga
    10201 ccctgcaaaa gccctgcagc tctacaaaca agcagccgac gcggagtatg gtcccgcgat
    10261 gacggcgctc gcgaatatat atgtgagcgg cggggcaccg gagcagagcg ttgcggaagc
    10321 cttcaaactg cttacacggg cggcgaaaca gggcgaaccg gaagccgaat acaagctggg
    10381 actgatgtac cgggatggcc aggggaccaa cagagactgc gagttggcga tcaagtggat
    10441 tgttgctgcg gccaaccaga aatacgctcc cgcacaggcg ggcgtaggtg acgtgtacag
    10501 ctcaggcacc tgtgttccgc aggactatgc gcgagcggcc aaagtttacg agctcgcggc
    10561 aaaccagaat gaggctgctg cggcggcaaa gctcggcgag ctttatgccg atgggcatgg
    10621 agtgaagcaa gatcccgaga ccgcatacaa atggttcaca attgccaaag ccgaagggat
    10681 tgccagcgat cgccaggaga agctgcgaag ccaactttcc aaggatcaga ttggggcagc
    10741 ggaaaccgct gcagaagtct ggatcaaagc ccacaaaaaa gagtgagttc tgcgcgcaga
    10801 gcttaaagcg ggcgctttgt attaacaaat ctgctgcgct cacgtgtcct ggatcagctt
    10861 ccaaaaacca tgttatctat cgtgctgccc gtttctgctt tccagcggaa aaacagctcg
    10921 gtgtaggaaa gcgtgatgta ctcgcttttc gcgatctcca ggagttgtgc ggtgcgatca
    10981 atccacgccg gctggccctc aatctcgccg aagttgccaa tcagagtttc gtcgatgacc
    11041 acgtgacccg agccgtccgt ccattcgcgt cggaattttt catacgtaaa acgaggctgg
    11101 taccctagcg cctcgagcat ggctgccagg gcgggaccgt tggtgacatc ggtttcaatt
    11161 tcccggcgtg acttgtgcgg acctgaaact gagggcttgt ctttgtacgt gacggtccat
    11221 ttggggccat attcgcggag ccgtagcagt gcgccccgct tccggagggg atcgcccgga
    11281 agatcgtaga gtgtgttttt ctcgtgggtg cgtgccgtaa cttcgtgaaa cccggcgctg
    11341 ctcagccggg cggttagctc gttcaggtct tgaattctga atttgatctc gacttcgtga
    11401 ttgtcattgg cagccatggg ctgaacttgt tggatgcggg acttaggcca gttcgagtcc
    11461 gagtgccatg cccatgccgc cgctcacgca cagcgtggcg agcccccgct ttgcattccg
    11521 gcggcgcatt tcatgcagaa gggtggcggt gatccgtgta cctgtgcagc caataggatg
    11581 tcccagtgca attgatccgc cattgacgtt cagcttttcg ggatccatgt gcatttcccg
    11641 gtcgcaggcc aggacctggg ccgcgaaggc ctcgtttaac tcgatcaggt caaaatcggc
    11701 cagtttcatt cccagcttct tttcgagttt ggccaccgcg ggtacgggac cgacacccat
    11761 ggtgctggga tcgacacctg cggaagtgac gcccatgatt cgggcgagag gcttgagatt
    11821 attgcgaccg acgaattctt cgcccgcaag gaccaccgca gcggccccgt ctgtgatgcc
    11881 ggacgaattt ccggcggtca cagtcccggt tttagaaaag accggtgaga gtttggccat
    11941 cttttccatg ctggcgccaa gaaacgggtg ctcatcttgc tggaaggttt cttcgccttt
    12001 tttggtttgg agcttcacac gaacgatctc atcctggaaa cgagcgctct tgatggctga
    12061 ctccgctctc ttctgggagc gcaacgcaaa ctggtcctgt tcgtcccgcg gaatgtgata
    12121 ctgctgggcg agaagttctg cggtttcccc catcaccagc ttgcagatct ggcagaggaa
    12181 gccgtcgcgg tacaggccgt cgaccagctc ctgattgccg aggcggtagc cccagcggcc
    12241 gccatccagg taatcgggga cgcgggacat ggattccgat ccgcccgtga gaacgcattc
    12301 catgtttccg gccaggattt cctgatatcc gagcgcgatg gccttcatgc cggaagcgca
    12361 ggcttgattc actgtgtagg ctggggcttc tttaggagct ccactgcgga tcgaaatctg
    12421 ccgggccgga tttgggccgt tgccggcctg ccgggcacaa ccgaaaatcg cctcttccac
    12481 ccgcccagga tcgacagcgg ctcgttccag ggcggctttc gccgcaatta cgcccatgtc
    12541 cggcgagctc aggttcgcga gcttgcctcc gaattttcca attggggttc ttactgcgga
    12601 aagaatgaaa acgtccgcca agggccatca acctccagca cgttaagtgt aacagggcgt
    12661 tgccgggctc actgaaggcc cgatttatgc tgccaaacaa tgaatatgca ttataattta
    12721 tgcataacaa aagtaattca ggaacaacgt ttctttgggc cggaccgtct aatgatgaga
    12781 taattagggt gatcagccta cgcaagaggc caatgtcccc acgttcggca gtaggcggaa
    12841 aagcaaccac cgcagtacta caaaacgatt tcttgagagg ctcactcaaa tccggggctt
    12901 gaaaaaccga gattagctta atcgttcgga ttcatatact tacaactcat atcagtagct
    12961 gggggatcaa ctaaatttga agccaaggag tgttcatgaa acgagtactg tccattctgg
    13021 cggtagccgg ttttatggct accaacgtgg gggcggctcc cgttccaaac caccgacagc
    13081 agcaacccca agacaaagcg gcgaccgata agaaagtcgc tgttagcgcc aagacggaaa
    13141 agagcctaac tcccaaagcg gttgcggcaa agtccgcagc caagccatac caggtaggaa
    13201 acgcatcgtg gtatggcaag cagttccacg gaaagcagac tgccagtggc gaggatttcg
    13261 acatgttcga actcaccgct gcacaccggc agcttcctct gggaacttat gtgaaggtga
    13321 cgaaccttcg taacggaaaa tggatcatcg tccgcgtgaa tgatcgggga ccctacgtgg
    13381 gcaaccggat catggacctg agctacagtg ccgccagaat gctgaacttc tacggcggca
    13441 tcgaaaaggt gcggattgac ctggtccaac cgacaaccat ggcggcaaac cagccggcgg
    13501 ttggagctcc ataatttccg aaatccggga ctatactgag ggtatgtccc ctcaaaatcc
    13561 tgaaataaca accgcagcag cccccctgca aactcgcgat cgcctcatag tggcgttgga
    13621 cgtaagcaca gcgcgggaag caggggagct ggtgcgtcgt gttggggacg cggcggggct
    13681 tttcaaggtc gggctccagc tttttgctaa cgaaggacca gccctggtcc gagagatgat
    13741 tgcctccgga caccgagtat ttctcgatct aaaactccac gacattccaa ataccgtgag
    13801 ccacgcagtg aaggctgcag cggagctccg tgtggacatg ctgactgtgc atgcttccgg
    13861 gggccgggcc atgctgcgcg ctgcgacgga agctgccgga cgggtaaacc tgctggcggt
    13921 gacggtactc accagtttcg ccgagcctga tctgaacgag gtgggagtgc cgggagaaat
    13981 cgcaccgcag gcgcttcgca tggcggagtt ggcgcgacaa tcgggcatac gaggcgtggt
    14041 ttcctcgccg cgcgaggcga gcctgctacg caagaatttg ggagaggatt tcctgatcgt
    14101 gacgccgggc atccggccag ccggggcaga cgtcaatgac cagcagcgga ttgcgactcc
    14161 ggcatcggcg ttagccgccg gggccagtca tctggtggtt ggacgcccga ttacgcatgc
    14221 cgcagatcct gcccgggcag cgcgggaaat tgtggaagaa atggcgggtg ttcaggcagc
    14281 tgtttaaggc tgcctcagca tctactctgg acagcttttt ttgccgaaaa tatagttgca
    14341 atcagcatgg aggagaagtc cttatgcgta gcctggctgt gtttgcgatt ttcaccgctc
    14401 tgagcctcag cgcccagaat gctcctgcac ctcaaaccga ccatccttcc ggcgccgcgc
    14461 ctctttccag cgcacagccg gcgcagccac agcagatcac cgatcaacca ccggctcagc
    14521 ccgcaaatga cggcaggcat gtaacggtgc cggccgggac tgaagtcctg ctgcaactga
    14581 agagcgcgat tgatagccgc aacaaccatg tgggcgacgg ggtctactgc cagacctcat
    14641 ttccggtcac agtagggaat gtaattgcga ttcccgccgg aacttatgtg aagggcgaaa
    14701 tcgtgaagct gcagcgggca gggcgcgtga agggccgcgg cgaagtattg ttcaagttca
    14761 acagcatgat cttcccaaac ggctatacgg tggacatgcc tggcagcgtt cataacgatt
    14821 ccggcacttc tgcggcgagt gtggacaagg aaggaaagat caaagcagat ggcagcgtag
    14881 gaaaagatgt ggagactgtg gcgaagggcg gcgcttacgg gttaggagga ggcacaattg
    14941 ccacggggac gttgaacgga gcgcgaatcg gcggcggcat aggtctggcg gcaggtctgg
    15001 ctacagtgct cctgacccgc ggaaatgaag tgaggatcga acccggagct tcattccgga
    15061 tggtgacgca gctaccgctg acggtggaca tcgtcggcgt ggatccgaac cggatggcga
    15121 ctgaaacagt cccgcggcca acagtaaata accggctgcc gcagccagcg gcttcttcca
    15181 acccgaaata gcggtttcaa tcaactcatg gcctgcccgg ctgccgatgt cttcgttttt
    15241 agacgggcaa agcctgtgaa aatccgccgc ccctgccggg agaactctcc gaaagatatt
    15301 tctaccggaa tctctcttcc atctttgtgc tttgccgtca gccctacgcc ttcccagggg
    15361 atacggcgtt tgccggtttc acggtaatgc ttcaggccgg cgtgatggtg tccgcgcagt
    15421 ggttcaggga tcagcattgt gaggttctgg ccaatcagct cttcaggctg atagccgaaa
    15481 acctcaagca cctttgggtt ggcatagaga acggtggagt tctcgtcgat cgtcagcacc
    15541 gcatcggctg atccactggc gagcagacgc aattcggcgt cgagtgactt catctcgctc
    15601 ttaatgcgtg ctcgctcaag aaacactccg atctgcccgc cggcatagta gaagaagttc
    15661 gcaagctgag aatcctggtc tctctgctca cgagaaaaca gctccagtac gccaagaaca
    15721 ccgctctgcg catagagagg gaaggccacg ccggaacgaa cgccctcaag ctgcgcaacc
    15781 gagttgcgcg ggaagttcat ttcactccgc agatcattga gccatacggt ctgacgttcc
    15841 aaccacgcgc gtccgggaag gccttcgccc ggcccaaacg tacggctgcg ggagacgctt
    15901 tcaaattgcg cggcattgac gctgttccat gctgagttgc acctcagatg aagagtggca
    15961 tcgtctacta cccagagaaa accgatgtcc caaccgaaac tgatgcccag taggctggtg
    16021 atggcaaagg tgcattcgtt ggagtcagta ctttccgcca gtatttgcgt gatggagacg
    16081 ctgatgcgga agaattcggc ttcgcgatag tgcggtgctg ggctttccat ggcagcttgc
    16141 gtttttgagt ttatgctgca gggtggctac cgtaaagcaa atgtgaccaa atgaaggcaa
    16201 ttcgtttccc aaaatgaacc acatgactca gtgagggctg gcccgtgagc gcgcgcttta
    16261 tgaaagcaaa gtcgagcggt cgcccaagga tggcaaagct cgtattaaat tctgtaaagc
    16321 tcgatctttc ctcattcaca ttttggaatt cccggcggca cgagaagagc taagtgactg
    16381 aggaatatcg attctcgaac cttctgtttt gtggaacttt ggatgcacct ttatagatgt
    16441 tgttcctgct gagcgcgacc cgggcgcgtg aagtcaaaca tcatcattct ccattttcat
    16501 aaaccaaact tgtcagatcg ccttcatttc gttcgcagga attgttttac ccacaggagg
    16561 gagcgagaga tgcataggaa ggtagccaca ttcccctgga ttctgctgct gatattaagt
    16621 tgggtgtcag tggcagcatt cggccaaacc accgcaagca tcaaaggcac ggttaccgat
    16681 gcaagcggag ccgccgtctc cggagccacg gtgacggtga agaacccaga cctcggtatt
    16741 gaacggacga cccagagtaa ttcggcgggc gactacgagg tgccagcact gccgcctgga
    16801 acgtattcgg tgcaggttca gggaaaagga tttgaaaccc agatcgcaaa agaagtgatt
    16861 ctggcggtca gcaagaactc agttcagaac ttcaacctca aagtcgcgag cacaagcgag
    16921 gtcgtaacgg tcgaagccac ggccccaatc attgaggcga caacgatgac ggtagggcag
    16981 acgatcgatc agcgcacggt gcaggagata cccctgaatg gccgccactt cgtggatctt
    17041 gcgctgttga ttcctggcac cgtgacaccg ccccagaacg gcttcctcac agccccgctg
    17101 cgtggccaag gctctttcgc cttcaacaca gccggaaacc gcgaagatgc cgtgaatttc
    17161 atgatcaacg gcatcaactt gaacgacatg gtgcagaacc aggtcacgtt ccagcccacc
    17221 atcaacaccg tttctgaatt caaggtcgat aattcgactt acagcgccga atacgggcgg
    17281 aactccggcg caatcgtcaa catcgctacc cggtctggca caaaccagtt ccatggcgag
    17341 ctatacgact acttgcggaa tgatttcttc gatgcgcgca acgcctttaa taggaccacg
    17401 gttgtgacga acggcgttac cgttccgaac ccgattgcga gcttcaaacg caaccagttc
    17461 ggtggcgatt tcggcggtcc aatctaccac gacaaaacgt tcttcttcct tagctacgaa
    17521 gggctccgcc agcgtcaggg gctgccattc gcagcgaacg tccttgatga tccaacccga
    17581 gcggcgattc ttgcggggac taaccctgtt gcgaaatcgc tcacgaacct gctgccggcg
    17641 gcgaacggaa cgctcaacaa cgctccggca ttcctgggat caggcgtggc gcctgtggat
    17701 atcgatcagg
//
LOCUS       DASQYP010000064        23926 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_129328, whole genome shotgun sequence.
ACCESSION   DASQYP010000064 DASQYP010000000
VERSION     DASQYP010000064.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 23926)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 23926)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..23926
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_129328"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..208)
                     /locus_tag="VE783_01965"
     CDS             complement(<1..208)
                     /locus_tag="VE783_01965"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52187.1"
                     /translation="MCTLTFIPKPGGYLIGMNRDENRLRAAALLPFVSDREGLEAVYP
                     REAATGGTWIAANAAGAAIAILNQN"
     gene            452..1342
                     /locus_tag="VE783_01970"
     CDS             452..1342
                     /locus_tag="VE783_01970"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF024836.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acyltransferase"
                     /protein_id="HYX52188.1"
                     /translation="MRIGWAIKEQRSGETGHRKRSFAPDVLTNPFLPAFLWARGALAQ
                     KFPPFQRLASTRQLFSPPYRACLANTKEERKAAFRLRFEVFNIELKEGLAAAFQTGED
                     TDRYDRYCDHIIVTDERTGRTVGTYRLQTGTAAARHIGYYSEQEFDFAPYRILRDELV
                     ELGRACIHPDHRGYEVLMLLWKSITHYAADRKARYMIGCSSLSSQDPAEGRGVYSRLK
                     PALVTEALQTSPTPAYSLPPCEIQVDARPPKLLRTYLALGAKICGPPAFDREFKTIDF
                     LTLMDLNNLTPSIRARLFDS"
     gene            1339..2139
                     /locus_tag="VE783_01975"
     CDS             1339..2139
                     /locus_tag="VE783_01975"
                     /inference="COORDINATES: protein motif:HMM:NF013702.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysophospholipid acyltransferase family protein"
                     /protein_id="HYX52189.1"
                     /translation="MSKARSAATKLFRIVGRGIPLAFFIFGAFIDLVWRALGRRLDET
                     TRAAVLQKWCKRVANALRLQVTTEGPLHSSGLIVSNHLSYLDVLAFSIACQSCFVSKM
                     EVRSWPLVGWAAHLAGTIFIDRSRAAATHEIQPEMEAALAAGVRLVLFPEGTSSSGEG
                     LLPFRSSLLQPAIDLNAPITAAAISYTLPEGDPAQEVCYWGAMTLAPHLLHLLTKEQI
                     LAHLRFAPQQLRFQDRKEAARALQLVIEGLRLPPTPAAKPEPGAIRSL"
     gene            2252..2923
                     /locus_tag="VE783_01980"
     CDS             2252..2923
                     /locus_tag="VE783_01980"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HYX52190.1"
                     /translation="MSSSAVPIPALQPGGRTHEQEIALMERVCQGEKGLFYELISPYQ
                     KSVYMAALSVLQNEADAEEVAQEAFLKAFSHLAGFRRESKFSTWLIQIALNEARMKRR
                     KDRKSLYESMDQQDSTEEGDYIPKDFADWREIPSEALQHKELRRALERALKGLDSKYR
                     EVFVMRDIEDLSIAETAQALGITEASVKTRLLRARLQMRDALAPGYDGAWRIGDGTWK
                     KVRPW"
     gene            2925..3170
                     /locus_tag="VE783_01985"
     CDS             2925..3170
                     /locus_tag="VE783_01985"
                     /inference="COORDINATES: protein motif:HMM:NF024881.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zf-HC2 domain-containing protein"
                     /protein_id="HYX52191.1"
                     /translation="MPIIEISCYHVWQEISNYIEDEVDPELRRRMEEHFKGCEHCAAV
                     LDGTTNVLRLVGDGRTFELPAGFSERLKKKLEKEIGD"
     gene            complement(3167..3625)
                     /locus_tag="VE783_01990"
     CDS             complement(3167..3625)
                     /locus_tag="VE783_01990"
                     /inference="COORDINATES: protein motif:HMM:NF025887.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HYX52192.1"
                     /translation="MTPDEELIAAARTEYREAYNSGDVERLLRVFAPQFIDWSDGEPS
                     FYGADSPKALRHRLTSLFARYTAKLGVMMVKITVLGNHATERGWYKLRLTDKITGEVT
                     NSLYRYFETWIMIGAEWKINFTITNTEQPPRMLPEDETALQGSVAGSDGG"
     gene            3725..4384
                     /locus_tag="VE783_01995"
     CDS             3725..4384
                     /locus_tag="VE783_01995"
                     /inference="COORDINATES: protein motif:HMM:NF013866.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HYX52193.1"
                     /translation="MHVAVTEVDEIACLPPVRGFLHTPDQKNGDGLVLTHGAGANCNS
                     KLLNALAAAFAEAGYVVLRCNLPFRQERPHGPPSPAIAERDRSGLRRAVEFIRARCGG
                     RIFLGGHSYGGRQATILAAEEPEIASALVLFSYPLHPPRKPLQLRTAHLPNLRTPSFF
                     VHGTRDPFGSLEEMQSALELIPAKHELLAAEGAGHEILGRKTAEDFILAVVGRFQGFA
                     N"
     gene            4482..6185
                     /locus_tag="VE783_02000"
     CDS             4482..6185
                     /locus_tag="VE783_02000"
                     /inference="COORDINATES: protein motif:HMM:NF015679.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase family protein"
                     /protein_id="HYX52194.1"
                     /translation="MRWLVLAVAFAALIFWPFHAGAPGASKGVLAATFDISSTGVSSS
                     AEISVPDNIRSLVTGSELRTLRWPNFSYFKSAVNALYAPGYQALWLAADQPIGPARAL
                     IAILERAEEKGLQPDDYEGPKWQARLQNLSAGGTLAQAEFDVALTISALRYATDLHSG
                     RVDPSRLGFGIPTHPFNAAEFVRNRLLTSGDIKTELDRIEPQFARYKQTLKALALYNE
                     IAKMPEEAPLPQVPDKGLAPGQTYTGAQQLARRLVEFGDLPPQATLPQQPDLYAGELV
                     SAVKNFQRRNDFNADGKLTKETVRELNVPAAQRLKQLQYALERWRWLPDNIKPPMVEV
                     NLPEFRLRAYEHDELSVTMKVVVGKAAGHHTPVFTDEMEYVIFRPFWNVPTSIIRNEI
                     IPALRRNPDYIEHHNMQVTGSNGQIVSEGAVSGDTLSGLRSGRYDIRQRPGPKNSLGL
                     VKFDFPNSYDVYMHGTPQNELFSRTRRDFSHGCIRVEDPTALAEWVLGLELPGVWPLE
                     RIKEAMYGDRTQRVNLPHRIPVLIMYQTAMATETGEVQFFQDIYKLDAELERALAGPH
                     R"
     gene            complement(6208..6651)
                     /locus_tag="VE783_02005"
     CDS             complement(6208..6651)
                     /locus_tag="VE783_02005"
                     /inference="COORDINATES: protein motif:HMM:NF017736.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF882 domain-containing protein"
                     /protein_id="HYX52195.1"
                     /translation="MYQLRLFETHTGEHIKIVYREGDNYVPQAIDDLNHFLRDHRTQT
                     VSHYDPRVFDLLHDLTASVGHPEAEINVVCGYRTPWSNNFLRSRSKAVAKNSLHMQAK
                     AIDIRIPGVQTATLRDAALNLQRGGVGYYAGEQFVHVDVGRVRRW"
     gene            complement(6869..7333)
                     /locus_tag="VE783_02010"
     CDS             complement(6869..7333)
                     /locus_tag="VE783_02010"
                     /inference="COORDINATES: protein motif:HMM:NF012257.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030551 - cyclic nucleotide binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic nucleotide-binding domain-containing
                     protein"
                     /protein_id="HYX52196.1"
                     /translation="MVADLPNREQEGLEPMIANQPQVYFPSGSVLFREGEKAEGAYFI
                     VTGEVTSSMESPEKGNLPLGCIHPPAYLALVDSLAGERYSCTIRALRDTRGIFIPRET
                     LLQTMADQKNNIALLKALAEEVSSSYDELRTVRDKFCGRSGSRKHKHSLAQA"
     gene            complement(7404..8111)
                     /locus_tag="VE783_02015"
     CDS             complement(7404..8111)
                     /locus_tag="VE783_02015"
                     /inference="COORDINATES: protein motif:HMM:NF012257.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0030552 - cAMP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Crp/Fnr family transcriptional regulator"
                     /protein_id="HYX52197.1"
                     /translation="MRSPYGFEIQENCITCPARAQREFCNVSAGALEQLQKSKSTSVY
                     PTGTLLYIEGQAPRGVFILCNGRAKLYTSSKQGKVIILKVAQPGEVLGVEAALGNREH
                     EETAELLESCQVNFMSSKDFMSYISANTEAALKTAAQLTADCRAAQEGIRCMGLSGSV
                     EEKLARLLAGWAAGANAEGRFKMPYKHEEVAQMIGSTRETVTRILGNLKRKKVIEVRG
                     ATVILKDLDKLKELAGG"
     gene            complement(8283..9188)
                     /locus_tag="VE783_02020"
     CDS             complement(8283..9188)
                     /locus_tag="VE783_02020"
                     /inference="COORDINATES: protein motif:HMM:NF012791.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0032559 - adenyl ribonucleotide binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HYX52198.1"
                     /translation="MSSTQVARHVQFKHIAFLSDLKSGAEAALSYAADLANWYGAKLV
                     LAHAFEPEPPLQIPPEPLEDWIGTPTAREEAEQKSRSIISSLALGDAVEGVVLADAGI
                     AGLMHDLERRHPDLLVVATHARHGLRKLLEGSVTEEVFRRSTWPVLVLPPGSMEEQRR
                     AEFRRVLYCTDLSEVAGTGLLYAAGIAEDHGAEFIVLHVDTDGSAGFSFDRIIDLKKL
                     EDWLVEQRHDLSGVMETAEKIVRFGNPAEETVQAARQLEADLIVLGARGLGSISGVAS
                     HFLGGTAYQVACSAACPVLIVPHQA"
     gene            complement(9206..9664)
                     /locus_tag="VE783_02025"
     CDS             complement(9206..9664)
                     /locus_tag="VE783_02025"
                     /inference="COORDINATES: protein motif:HMM:NF012780.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CBS domain-containing protein"
                     /protein_id="HYX52199.1"
                     /translation="MKVEQIMTPNPACCLGDDFVQVAASIMRRLDVGIVPVVDTLGPQ
                     GKLVGVITDRDLCLGVIAEARDPNITRVSELMSKHPETVKPNDTMEHVLGHMRHAQIR
                     RIPVVNDEFAILGMVSLSDVVRDRATPEGEVCKTLAAISAPMHRKIARAA"
     gene            9899..10957
                     /locus_tag="VE783_02030"
     CDS             9899..10957
                     /locus_tag="VE783_02030"
                     /EC_number="2.7.1.11"
                     /inference="COORDINATES: protein motif:HMM:NF002872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003872 - 6-phosphofructokinase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006002 - fructose 6-phosphate metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent 6-phosphofructokinase"
                     /protein_id="HYX52200.1"
                     /translation="MRTLGICTGGGDCPGLNAVIRAVVKSAIVQHGWRVLGIRDSFDG
                     LLAPEKTRELRLDDVAGLLSRGGTILGTTNRNNPLRYPTQEGSQKVRDMSDQCIVNAR
                     TLGLDAMVVAGGDGTAAIALELYRKGLPVLFVPKTIDNDLQETEMSVGFDTALHTASE
                     ALDKIHTSAESHHRVMMVELMGRTAGWIALEAGMAAGADVILIPEIPFRLQNVCRAIQ
                     QRESSGKNFTIIAMAEGIALPADLAAEHDPHDGRTGEIMRTAIARQTGKETRLTVLGH
                     IQRGGAPSPYDRLLATRFGVKAVELASKGAFGQMVCLREGLIQSSALENAVRGPRLVN
                     PNGEMVRAARAMGTCFGD"
     gene            complement(11038..12099)
                     /locus_tag="VE783_02035"
     CDS             complement(11038..12099)
                     /locus_tag="VE783_02035"
                     /inference="COORDINATES: protein motif:HMM:NF013646.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HYX52201.1"
                     /translation="MNSFDVVVAGGGPAGAVTALDLSRRGFRVALIEQSAYENLRVGE
                     TLPPQIRQPLMELGVWERFLSTEPLESYGIRTAWETQTARHRDFLNNPYGCGWHVDRA
                     RFDAMLAAAAADGGAELLLSAHVKSCMTIGGPCQLDVVHDKTNLSFSGRVLVDATGRK
                     ALLASRLGAQADVADRLIGAVTFCDLPEPARWTLIEAAEEGWWYSAPLPRDRMVFAYM
                     TDSDLWNADRWHELIAAAPLTFERVGTKQILPPSMVVSAGSLVRHPVAGANWIATGDA
                     ALAFDPLSGQGVLKSIESGTRCAAAIAGYLAGNRDAFNSYVAWVQETYNGYLSVRRQF
                     YSAVLRWPGSQFWKRRQSM"
     gene            complement(12118..13620)
                     /locus_tag="VE783_02040"
     CDS             complement(12118..13620)
                     /locus_tag="VE783_02040"
                     /inference="COORDINATES: protein motif:HMM:NF036537.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LodA/GoxA family CTQ-dependent oxidase"
                     /protein_id="HYX52202.1"
                     /translation="MSWVFKIFPSIGVARIGNCPDDSPSGFYVGPEIPGSVIVPTNGY
                     KDAQGRVRRQAARFRVYGWENGVFMGEITSSVANITWTVELANKKAAFNRFEGIGRTG
                     PLRNASVTDRSSLMITPGPRTLTGPNGTALFDTGSFLGTPVSLGEIQTDANGRLLVLG
                     GFGSSSSPTNAPLVTFANNDGWHDDVSDGPVTATVTLHGNQPPVQASGAWVICPPPRF
                     APPIGHIISLYDALLQSAVDRLGFKVPTVPSFTKDVYPIIKKAIDYQWVTTKIGNNHN
                     PLPAVIPPPATADQRNAIFQALRDPAITPTVDTPHLMPAIWTDSFADLFLQRGHGSPN
                     TGHWANHALTPTQYNVMKNWAAGNFINDWVGPPALDTNVTPDGLTRAALENCSGGPFF
                     PGIETSFFTRDVYPYVEPFRLDGSQLSAGDLSKQQAIPWQADFFDCVFQSPLSWWPAA
                     HPDNVFTATSNNYVTWDRGMNSFQDMVNFWSGLGFMVQSGDAIIESERTL"
     gene            complement(13639..14415)
                     /locus_tag="VE783_02045"
     CDS             complement(13639..14415)
                     /locus_tag="VE783_02045"
                     /inference="COORDINATES: protein motif:HMM:NF019590.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NIPSNAP family protein"
                     /protein_id="HYX52203.1"
                     /translation="MISRRSALYWLGVSAGAAGALNTFPAFAKNVRPENGTRVIALES
                     FSVIDAGQVEHLRSYIHEALLPATDHVRNSSTMCLEAVVAPHTPQTLLLTVYSRFDEM
                     LEERARIAADPHVRRAWAGIESAQVLDDVRSQVLVVNAESVRFPAQSASLKSGLFEVR
                     TWHAAAWRGGPAPEVSSVLSRIGAHPIVAGATVAGEHLPRFTYVLPFESLAARQQVWD
                     RLDGDGQWMAMQQESVARFGSGARTTAKAIYRLAPWSPLA"
     gene            complement(14615..14704)
                     /locus_tag="VE783_02050"
     tRNA            complement(14615..14704)
                     /locus_tag="VE783_02050"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(14668..14670),aa:Ser,seq:tga)
     gene            14792..15331
                     /locus_tag="VE783_02055"
     CDS             14792..15331
                     /locus_tag="VE783_02055"
                     /inference="COORDINATES: protein motif:HMM:NF012780.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CBS domain-containing protein"
                     /protein_id="HYX52204.1"
                     /translation="MSASLRWNKEEARMRVQEVMTPDPICCTQNDDIASAAAIMTDGS
                     TSMVPVTEYHYRPSRFLGVITQRDLCGAVAQGKDPVATRIEECMSANSPSCLPTDDVA
                     HALRAMRASGLLRIPVLSHKKELLGTISMGDIIRHHAADSGELFRTLSVIAITNAPAK
                     VPVAKFRTYTRDKGFSAAS"
     gene            15540..16715
                     /locus_tag="VE783_02060"
     CDS             15540..16715
                     /locus_tag="VE783_02060"
                     /inference="COORDINATES: protein motif:HMM:NF024824.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HYX52205.1"
                     /translation="MGNRSFQLQSWATVALSVCLVAPLALAQRSGGTGTPSRGTSTPR
                     NTTPDPNAQPTFIYGRVAMEGGGALSEPVAIERVCNGVARREGYTDFKGQFQLQLGQN
                     FGFQDASENDPRTSPTAPVRPSGQSVSRQAINLQGCEFRAILAGFVSTTVSYRYTGDS
                     FQTDIGTIMLKRMGDGRGSTVSVTSMSAPKNAKQAFEKAERAYSANKLEDAEKELNKA
                     VRDYPQFAAAWSMLGDIHQKGQQLEQARGDYEKSIAADPQYVNPAFGLALVAIQEKKW
                     EEAARFTAQASSLNAYAYPVAYFYNAVSNYNLGKYDDAEHSARKYKSVDAEHKHPDVS
                     LLLSTILEIRKDYAGAAQEIREYLQNVPDSPKAEELKSRLKTLDDLSVASNQQQPRQ"
     gene            complement(16773..18077)
                     /locus_tag="VE783_02065"
     CDS             complement(16773..18077)
                     /locus_tag="VE783_02065"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52206.1"
                     /translation="MKRCLLLIYVVPALAVTALAMDRRHFNELNKKGRELRQKQDWKA
                     LREVLLEIGKELPAPTPVYLLRRASVEAHLGNNTEALNWLERYAAMGLTYDVAADDDL
                     KPLLSDPAWPKVADEMKRAAVPVNKVQKFCTLPVPDLMPEDLTFDGSGSLILSSVRHH
                     SLYRASLSRTDKGNCILQELGLPPEAKRWPVLATSYDPQRKLLWASTAAIPDFPDVPK
                     KDSGRTALLAIDPQTGKLLRRIDLGSSTPALLGDMSVGADGSVYLGDSLGDGSYRVSG
                     DVKSAKLEKIAEGLFSPQTPALARDGKRLFVADYSLGIAVVDPSGHSKSVTYLAHPEN
                     IACTGIDGLLLTGNSLIGVQNGVEPARVVRFQLNPEQTRIESVEVLAQGFEGLGEPTH
                     AAAHDGWIYVTANVGWNKLDNKGNLKTGESFTAPVVFRFREK"
     gene            18212..19258
                     /gene="ruvB"
                     /locus_tag="VE783_02070"
     CDS             18212..19258
                     /gene="ruvB"
                     /locus_tag="VE783_02070"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: protein motif:HMM:NF000868.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0009378 - four-way junction helicase
                     activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction branch migration DNA helicase
                     RuvB"
                     /protein_id="HYX52207.1"
                     /translation="MAASGQNEKDLNRERLVSAVQADDDASFELKLRPKYLREFVGQR
                     KVKENLQVAIEAARTRGEALDHVLLYGPPGLGKTTLATIIANEMGVDYQQTAGPAIQI
                     KGDLTAILTNLREKQVLFFDEVHRLQPALEEILYSALEDYKLDIIIGQGPSARTHTID
                     VHPFTFIAATTRAGLLSAPLRSRFGIILRLEFYDTEELKFIIERSAEILGVQIDDEGA
                     NELAGRARGTPRIANRLLRRVRDFAQVRGGGKIDKATAQAALEMLEVDKHGFDEIDRR
                     LLLTIIQKYGGGPVGLGTLAAALAEEPEALEEIYEPFLIQIGFLDRTPRGRVATRLAY
                     DHFGIRYGRQPDLF"
     gene            19355..21748
                     /locus_tag="VE783_02075"
     CDS             19355..21748
                     /locus_tag="VE783_02075"
                     /inference="COORDINATES: protein motif:HMM:NF039587.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5916 domain-containing protein"
                     /protein_id="HYX52208.1"
                     /translation="MARFFAKAPKHRGPKLPLSGLLAFIAILASGFARAQEPASTPKP
                     APPSLAAEISSLDVPRLEISPKLSDFEGEGMEPVTPLARKMLKVGRFVQRDPKDGAPV
                     SQRTEAYMGYTERSFFVVFLAFDSNPRLMRARMLRREQIDDDDQVGLFLDTFHDHRHA
                     YMFYANPYGIQQDALFSETDGPDLSWDTVWRTQSKITRQGYMVEFDIPFKSMRFQPSA
                     EHTFGILLGRVIPRNSERSYYPENSSTKQGWLIHEGDIKGFEQISPGRNIQFIPYSSL
                     SAFRDLDQRDPAGDRFSGKHLQPKEGVDAKMVLKDSLVVDATVNPDFGQIESDDPQVT
                     VNQRFEVFFPEKRPFFQENSSYFATPMALLFTRRVVDPLYGARLTGKVGQWDIGSFVA
                     NDRAPGKAVIDTDPLSGNDAFFGVFRLNREIGKNNSVGFIFTDRELNTNPNSFCTITE
                     CIVRNNRVGGFDTQIKLNQNWRVNAQAVTSETEFNDGTRLAGPAYRALGEYSSRKVEF
                     NSTYDDISPGFTTEVGFIPRTDMRRVNNFARYFFRPEGKVLTAHGPFVVEQSLWDHSG
                     SSLLQQAMAGYEWDLQRSSFINLFALAEDESLRPIDFTALPANRGYRHQQGGINAATQ
                     YFKWLNLNVEYEMGTTTNFVPAIGAPVLANYSSGSARAVVRPTKRLTVENTYLLTRLR
                     NQDSNLNIFNNHIFRSKLNYQFTKEFSLRLIGQYDTTLGNPALTSLVNTKHFNGDVLF
                     TYMVTPGTAIYAGYNSNLQNLDPTLQHDALGNLLRTRSNFINDGRQIFIKVSYLFRY"
     gene            21783..22958
                     /locus_tag="VE783_02080"
     CDS             21783..22958
                     /locus_tag="VE783_02080"
                     /EC_number="6.3.2.4"
                     /inference="COORDINATES: protein motif:HMM:NF002526.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008716 - D-alanine-D-alanine ligase
                     activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanine--D-alanine ligase"
                     /protein_id="HYX52209.1"
                     /translation="MTKTRVGVLFGGRSGEHEVSLLSAASVIKAINQKKYEVVPIGIT
                     KEGRWVSAREAEKLLRGEALAPSHGLRAGDPQSTASAAVLARGEAVIMPPSPEAHGLV
                     PLESAAKNQGGAIEVDVIFPVLHGTFGEDGTIQGLMELADLPYVGAGVLGSSAGMDKD
                     VMKKLFAAAGLPIVRHVTVLRSRWEKEPKKAVKDIEGRLKYPVFVKPANLGSSVGISK
                     AHNKKELPTAMDEAARFDRKIVIEQGVGGKKRKARELECAVLGNDDPKASIVGEIVPA
                     AEFYDYNAKYVDEGSKLLIPAPIGKKLAKQVQEMAVRAFQSVDCSGLARVDFLMDPDN
                     ERIYLNEINTMPGFTSISMYPKLWAATGIEYSELIGRLIELGLERFREKKRNQYSKN"
     gene            23019..>23926
                     /locus_tag="VE783_02085"
     CDS             23019..>23926
                     /locus_tag="VE783_02085"
                     /inference="COORDINATES: protein motif:HMM:NF025006.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxypeptidase-like regulatory
                     domain-containing protein"
                     /protein_id="HYX52210.1"
                     /translation="MKKAVPSLFVLIFLCAAPLRAQTDTGSLEGTVVNAQNERVIPRA
                     TVLARNVKNASDVTSVRADDSGHFAFTNLKAGAYRITAEQQSFYVDPHRRIFQPVVEV
                     AAGELRSGVVVRLQPTAVVTGQIVDEHNDPMEHVQVKLLAREYHKGRLSLTMAGLGLT
                     DDRGEYRIYDVRPGNYYLLAEVNPALRKKGVEVIATTGMTGVIDRSGLRKEDGGPVPP
                     APYTFPPQFFPSTRDFLDATSLPIHPGDETHGDFVMFSTPSVSVSGVVLNGMTGDRVN
                     NAAVAAYWTDIFGGAGGNIAATSKPNG"
BASE COUNT         5191 a         6941 c         6912 g         4882 t
ORIGIN      
        1 ggttctggtt gagtatggct attgcggcac cggcagcatt ggcagctatc cacgtgccgc
       61 cagttgcagc ttcgcgagga taaaccgcct ccaaaccctc ccggtcggag acgaatggta
      121 ataaagcggc agcgcgcagg cgattctcat cgcggttcat gccgatcaga tagccacccg
      181 gcttagggat gaaggtcagt gtgcacatgg tcccacttac taagtccgca acaaaccttg
      241 tcgcacggtt ggatgagaaa aggcagcttc ccgttccgat aaaaattcgt gaaaacccgc
      301 caacttaagt cgcaagtctc aaccccagag taatcaccct ttcggcgcat gtgtactcag
      361 aaaacacatt tggacttccg gccactcgaa ttcactgaac catcacaagc ctttcatttt
      421 tatttaactg ccgctcgcta cgctcccaaa catgcgaata ggctgggcca taaaggaaca
      481 gcggagcggc gaaaccggcc accgcaagcg cagtttcgct ccagatgtgc tcaccaatcc
      541 ttttctgcct gcttttttgt gggcacgcgg cgcgctcgcg cagaagttcc cgccgtttca
      601 gcgcctggcc agcactcgtc aattattctc gcctccgtac cgcgcctgcc ttgccaacac
      661 aaaggaagaa cgcaaagcag cgtttcgtct gcgttttgaa gttttcaata tcgaactgaa
      721 ggaaggactg gctgcggcat ttcaaaccgg cgaagacacc gaccggtacg atcgctattg
      781 tgaccacatt attgtgaccg acgagcgcac cggcaggacg gtgggaacct accgcttgca
      841 aacaggaaca gccgcggcgc gtcacattgg ctattacagc gagcaggaat tcgattttgc
      901 gccctatcgc attctccgcg acgagttggt ggaactcggg cgcgcctgca tccatcccga
      961 ccaccgcggt tatgaagtgc tgatgctgtt gtggaagtca atcactcatt acgctgcaga
     1021 ccggaaagcc cgctatatga tcgggtgcag ttcgctcagc tcacaggacc ccgcggaagg
     1081 acggggcgtg tattcgcgat taaagccggc gctggtgact gaagcgctgc aaaccagccc
     1141 tactcccgcc tattcgttgc cgccttgcga aattcaggtg gacgcgcgac ctcccaagct
     1201 tctccgcacc tatctcgctc tgggcgccaa aatctgcggg cctccggcct ttgatcgcga
     1261 attcaaaacc atcgactttc tcacgctcat ggacttaaat aaccttacgc cgtcaatccg
     1321 cgccagatta tttgactcgt gagcaaagcc cgtagcgcag ccacaaaact gtttcgcatc
     1381 gtaggccgcg gaatccctct ggcttttttc atcttcggtg cctttatcga tctggtctgg
     1441 cgagctctcg gcaggcgcct tgacgaaaca acccgcgccg cggttcttca gaaatggtgc
     1501 aagcgggtgg cgaacgcgct tcgtcttcaa gtcaccacag agggacctct gcactcctcg
     1561 gggctcatcg tttccaatca cctgagctat ttagatgtcc tggcgttcag cattgcatgc
     1621 caaagctgct ttgtttccaa aatggaggtg cgctcctggc cgttagtggg ctgggcggcc
     1681 cacttggcgg gcaccatttt cattgaccgt tcgcgagcag ccgccacgca cgagattcag
     1741 ccggagatgg aggccgccct cgccgccggc gtgcggctcg tattatttcc agaaggcacc
     1801 agctcgagcg gagagggcct gctgccgttt cggtcgtccc tgttgcagcc ggccattgac
     1861 ttgaatgccc ccatcaccgc tgccgcaatc tcctacacgc ttccggaggg tgacccggca
     1921 caggaggttt gctattgggg cgcgatgacg ttggcccccc acctgcttca tctcctcacc
     1981 aaagagcaga tcctcgccca tctccgcttt gccccgcaac agcttcgttt tcaggaccgg
     2041 aaagaggctg cccgggcgct tcagttagtg attgaaggtc tgagactgcc tccaactcca
     2101 gccgcgaagc ccgaaccggg cgcaattcgc agcttgtaac ttccaacacc ctcgcgaatc
     2161 tcaaatgccg gccaggaaaa accttctccg aacttccaga aaggcggact agaatgacgt
     2221 tccgagacag ttcagatgtc acggaggccc ggtgagttcc tctgctgtcc caatcccggc
     2281 tctgcaaccc ggcgggcgca cacacgagca ggagatcgcg ctgatggaac gggtgtgcca
     2341 gggcgagaag ggtctgtttt atgaactcat cagtccttac cagaaatctg tctacatggc
     2401 ggccctttcc gtcctgcaaa acgaagctga tgccgaagag gtggcacagg aagcattttt
     2461 gaaggccttt tcgcacctgg ccggcttccg cagggaatcc aagttcagta catggctcat
     2521 ccagatcgcc ttaaatgagg cgcggatgaa gcgccgcaaa gaccgcaaat ctctttacga
     2581 atccatggac cagcaggaca gcaccgagga aggcgattac atcccgaaag atttcgctga
     2641 ctggcgcgag ataccttctg aggcgctcca gcataaggaa ctcaggcggg cgttggagag
     2701 agcattgaaa gggctcgatt ccaagtaccg cgaggtgttc gtgatgcgtg atattgaaga
     2761 tctgagcatc gcggaaactg cgcaagctct ggggataact gaggcgtcag tcaagacacg
     2821 gctattgcgt gcccgcctgc aaatgcgcga tgcactggcg cctgggtatg acggcgcctg
     2881 gcgcatcgga gacggaacct ggaagaaagt gaggccctgg taacatgcca atcatagaga
     2941 tcagctgcta tcacgtgtgg caagagattt ccaactacat tgaggacgag gtcgatcccg
     3001 agctgcgccg ccgcatggag gagcacttca agggatgcga acactgcgct gcagtacttg
     3061 acggaaccac gaatgtgctg cgcctggtcg gcgacggccg taccttcgaa ctgcccgcag
     3121 gcttcagcga gcgcctgaag aaaaaactgg agaaggaaat tggagactaa ccaccgtcac
     3181 ttcccgctac actcccctgt aatgctgtct cgtcttccgg cagcatccgc ggcggctgct
     3241 ctgtattggt aatcgtaaag ttgatcttcc actcggcccc tatcattatc caagtttcaa
     3301 agtaacgata aagcgaattc gtgacctcac ctgtgatctt gtctgtgagc cgcagcttgt
     3361 accagccgcg ttcggtggca tgattgccta aaacggtgat cttcaccatc atcacgccca
     3421 gttttgccgt atagcgcgcg aaaagacttg tcagccggtg ccgcagcgct ttgggactat
     3481 cggcgccata gaagctcggt tccccgtctg accaatcgat aaactgcgga gcaaacaccc
     3541 ggagcaggcg ctcgacatcc ccactgttgt aggcttcgcg atactcggtc ctggcggccg
     3601 cgatcagctc ctcgtctggg gtcactggtg tttcctttat tttgaaatgt gagcgcactc
     3661 tatctgagtc tattgagtgt gtcaaaagct cactggaatt gctgatcgcc tatacttagg
     3721 cagcatgcat gttgcggtta ctgaggttga tgagattgcc tgccttccgc cggtgcgcgg
     3781 atttctccac acgcccgacc agaagaacgg tgatggcctt gtactcacgc acggcgccgg
     3841 cgcgaactgc aactcaaaac tgctgaatgc tcttgccgcc gcgttcgccg aagccggata
     3901 cgtggtgctg cggtgcaacc ttccattccg gcaggaacgg ccgcacgggc cgccatctcc
     3961 cgcaatcgct gaacgcgacc gctcaggtct gcgacgcgcc gtagagttca tacgcgcccg
     4021 ctgcggcggc cgcatcttcc tgggcgggca ctcatatggc ggacggcaag ccaccattct
     4081 cgcggcagaa gaacctgaga tcgcctcagc gctcgtgctc ttctcgtatc cattacatcc
     4141 gccacgtaag ccgctccaac ttcgcacagc acatctcccc aatctgcgaa ctccttcgtt
     4201 ctttgtgcac ggaacgcggg atccgttcgg ctcgctggag gaaatgcaat cggctttgga
     4261 gctcataccc gcgaaacatg aattgctcgc agcagaaggg gccggccatg agatattagg
     4321 caggaaaacg gcagaagatt tcatactagc cgtcgtcggt cgcttccagg gctttgcaaa
     4381 ctaacgaccc gcccgtaccg tagtctcacc tgctttggtg actccagtca cggcgcaggc
     4441 acacgcaaat tgagcaacat atactgtgtg cctctagaga gttgcgctgg ctggttctcg
     4501 cggtcgcctt cgcggccctg atcttctggc ccttccatgc aggcgcgccg ggtgcgagta
     4561 aaggcgtact cgctgcgact ttcgatatct cctcgaccgg cgtttcatcc tccgcagaaa
     4621 tcagcgtgcc cgataacatt cgttcgctgg tgaccggatc agagctaaga actttgcgct
     4681 ggccgaattt ctcctacttc aagtctgcag taaatgcttt gtatgctccg ggatatcagg
     4741 cattgtggct ggctgctgac cagccaatcg gtccggcgcg ggctttgatt gcaattctgg
     4801 agcgcgccga agagaaaggc ctgcaaccgg acgattacga gggcccgaag tggcaggcca
     4861 ggctgcaaaa cctcagcgcc ggtggcacat tggcgcaggc agaatttgat gtggcgctta
     4921 cgatttcggc gcttcgctat gccactgacc tgcactccgg ccgcgttgat ccgtcacgcc
     4981 tgggtttcgg cattcccaca catcctttca atgccgcaga gttcgtccgc aaccggctgc
     5041 tgacttccgg cgacattaag accgagctgg atcgcattga gccgcagttc gcccgctaca
     5101 agcagacact gaaggcgctg gcgctttata acgagatcgc caaaatgccg gaggaggctc
     5161 cgcttccgca ggtgcctgat aaaggactgg ccccgggaca gacctacacc ggagcgcagc
     5221 agctggcgcg gcggctggtg gagtttggcg atctgccgcc acaagccacg ctcccacagc
     5281 agccggatct ttacgccggc gagctggtca gcgcggtcaa aaacttccag cgcaggaatg
     5341 acttcaatgc agacggcaag ttgacgaagg agacggtcag agaactgaat gttcccgcgg
     5401 cacagcggct gaagcagttg cagtacgcgc tcgaacgctg gcgctggctt cccgacaaca
     5461 tcaagccgcc catggtggaa gtgaatcttc ctgagttccg gttacgcgcc tatgagcacg
     5521 acgaactctc cgtgacaatg aaggtagtcg tcggcaaggc cgccgggcat cacacgccgg
     5581 tattcactga cgagatggaa tacgtgatct tccggccgtt ctggaatgtg cccaccagca
     5641 tcattcgcaa tgaaatcatt ccggccctgc ggagaaatcc tgattacatc gagcatcaca
     5701 acatgcaggt caccggttcc aatgggcaga tcgtcagtga aggagccgtc tccggtgaca
     5761 cgctgagcgg gcttcgctcg ggccgatacg acatacgcca gcgtccaggt ccgaagaatt
     5821 cgctgggact ggtgaaattc gacttcccga attcttacga cgtttacatg cacggcacgc
     5881 cgcagaatga acttttctca cgcacgcggc gcgatttcag ccacggctgc attcgcgttg
     5941 aggatcccac ggcgctggcc gaatgggtgc tggggcttga gcttccaggt gtgtggccgc
     6001 tagagcgcat aaaggaagcc atgtacggag accgcacgca gcgcgtcaac ctgccccatc
     6061 ggattccggt gctgatcatg taccagacgg cgatggctac cgagaccggc gaggtccagt
     6121 tcttccagga catctacaag cttgatgctg aattagagcg ggccctggcg ggcccgcata
     6181 gatgaacccg gaaaaacgcc gagcagatta ccagcggcgt acccggccca cgtccacatg
     6241 cacgaactgc tcaccggcgt agtagccgac cccaccgcgt tggaggttca gagcagcgtc
     6301 gcggagcgtg gcggtctgga ctccgggaat gcgaatgtca atggccttag cttgcatgtg
     6361 caggctgttt ttggccacag ctttcgaacg gctgcgaagg aaattgttgc tccatggagt
     6421 gcggtatccg cataccacgt taatttcggc ctcaggatgt cccacggagg ctgtcaggtc
     6481 gtgaagcagg tcaaaaacac gtgggtcgta gtggctgacg gtctgggtcc gatggtcgcg
     6541 caggaaatgg tttaaatcat caatcgcctg aggaacgtaa ttgtcccctt cgcggtaaac
     6601 aatcttgatg tgctcgcccg tatgcgtctc gaacaagcgc agctggtaca ccttggcaga
     6661 tgtagcaggc gaggttatgg gttctgggcg tgccccggtc gagataaaga ggcaaaggag
     6721 ggaagttaca acaactctga acacaactcg gtgagtttat cacggcgagc cgatgataag
     6781 cgaacgagtg ttcgaacttt tttgccctac gaaaagctca gtgttttcag cttatgaaaa
     6841 ctattgcagc cttgcaaaaa tttgcccact aagcctgcgc cagcgaatgt ttatgcttgc
     6901 gcgagccgga acggccgcaa aatttgtcgc gaacggtgcg cagctcgtca taactgctgc
     6961 tcacttcttc agccagtgcc ttcagcagtg cgatgttgtt cttctggtcc gccatggtct
     7021 gcagcagtgt ttcccgtgga ataaagattc cgcgggtatc gcgcagcgcc cggatggtgc
     7081 aggaatacct ttcccctgcc agggagtcaa ccagggcaag atacgctggc gggtgaatgc
     7141 accccagcgg caggttgccc ttttccggcg attccatgga gctggtaact tcgccggtca
     7201 cgatgaaata agcgccctcg gccttctcgc cttcacgaaa caggacactg cctgaaggga
     7261 aatatacttg tggttgattg gcgatcatgg gttccaatcc ttcctgctcg cgattgggga
     7321 gatcggcgac catcatgtga ctcagactag agttctttaa aattttgtgc tgtgtccacc
     7381 atcaccgaaa tcggtgacga tgctcacccg ccggccagtt ctttcaattt atccagatct
     7441 ttcaggatga ccgtggcgcc acggacctct atcaccttct tgcgcttgag gttacccaga
     7501 atccgggtaa cagtctcgcg ggtgctcccg atcatctggg ctacttcttc gtgcttgtaa
     7561 ggcatcttga agcggccttc cgcgttggcc ccggctgccc agcctgcgag caggcgggcc
     7621 agcttttcct ccactgagcc agaaagtccc atgcagcgga tgccttcctg tgccgcgcgg
     7681 caatcggccg tcagctgggc tgcggtcttc aatgcggctt ctgtattcgc gctgatatag
     7741 ctcatgaagt ctttgctgct catgaagttg acctggcagg actccagcag ctcggccgtc
     7801 tcctcatgct cgcgattgcc cagcgctgct tccacgccca gcacttcacc gggctgcgca
     7861 accttcaaaa tgatgacttt cccctgcttg gaagaggtat ataactttgc cctgccatta
     7921 cagagaataa acacgccgcg gggtgcctgg ccttctatat agaggagggt gccggttgga
     7981 tacacgctgg ttgacttgct cttttgcagc tgctccaggg cccccgccga gacgttacag
     8041 aattcccgtt gcgcccgggc cgggcaagta atgcagtttt cctggatctc aaaaccgtag
     8101 ggcgaccgca tgttcacacc accgggtgcc gccccatctc aggctcaaag cgcagcgcca
     8161 aaaaaatttc gctcaaaaaa tcgcgcttct ggggtagaca tctcccattg gcagtgtcac
     8221 ccggcttggg ccggcttcgc cgtgacggtg gtcacgtaaa ccgctgaaat tgatatacct
     8281 atttacgcct gatggggcac gatcagtacc gggcatgccg ccgagcatgc cacttggtag
     8341 gcagtgccac cgagaaaatg actcgcaaca cctgaaatgc tgcccaggcc gcgcgcgccg
     8401 agcacgatca ggtcggcttc cagttggcgc gcagcttgaa ccgtctcctc ggcaggattg
     8461 ccgaagcgca cgattttttc tgctgtctcc attacaccgg agagatcatg acgctgctcg
     8521 accagccagt cttccagctt cttgagatcg ataatgcggt cgaaggagaa tcccgccgaa
     8581 ccgtcagtat ccacatgtaa cacgatgaac tccgcgccgt gatcctcagc aattcctgcg
     8641 gcatagagaa gaccggtgcc ggcaacttca gagagatcgg tgcaatagag gacgcgccgg
     8701 aactccgcac gccgttgttc ttccatactg ccgggcggca acaccaggac gggccaggtg
     8761 gaacgtcgaa atacttcttc cgtcaccgag ccttccagca gcttgcgaag gccatgacgc
     8821 gcatgtgtgg ccacgaccag cagatcagga tggcgccgtt caagatcgtg catcaacccg
     8881 gcaataccgg cgtcagcaag caccacccct tcaactgcgt cgcccagcgc cagactcgag
     8941 atgatggagc gactcttttg ctccgcttct tctcgcgccg taggcgttcc tatccagtct
     9001 tcgagcggtt caggcgggat ctgtaagggc ggctcaggct caaaagcatg ggccagaacc
     9061 agctttgctc cgtaccagtt cgccaggtcg gcggcatagc tcagagcagc ctccgcacca
     9121 ctcttcagat cggaaagaaa agcaatgtgc ttgaactgca catgacgggc gacttgcgtt
     9181 gatgacatgg tgcttctccg tttaattacg cggctctggc gatctttctg tgcattgggg
     9241 ctgagatggc tgccagggtc ttgcaaacct cgccctcggg tgtggcgcgg tcgcgcacca
     9301 cgtcactcag tgagaccatt ccaagaattg caaattcatc atttaccacc gggatacggc
     9361 ggatctgggc gtggcgcatg tgccccagca cgtgctccat cgtgtcattc ggctttaccg
     9421 tttcggggtg tttcgacatc agctcgctca cgcgagtgat gttcgggtca cgggcctctg
     9481 cgatcacgcc gaggcagaga tcgcgatccg taattacgcc gacgagtttg ccctgcggac
     9541 cgagcgtgtc cacaaccggc acaattccga catccagccg gcgcatgatg ctggccgcaa
     9601 cctggacaaa gtcgtcgccc agacagcatg ccgggttcgg agtcatgatt tgttcaacct
     9661 tcattgcttt catggcgggc ctccttggcc atgcgggggt tcaagttcat gccgtttaaa
     9721 cgcaccacct gaccttatcc tgcgcggtaa caaccactta atctgtgatc cctgataccg
     9781 ccacatgtga cggggttcaa tgcaccgaag agcgccccgg cggtgaccag catcaccgag
     9841 ccggtaagag aagcggctta cgctggaaca gcggaaatgc gctggaccgg aatcaaagat
     9901 gagaactctg ggaatctgca caggcggagg cgactgcccg ggtcttaatg cagtgatccg
     9961 agcggtggta aaaagcgcca tcgttcagca tggctggcgc gtgctcggca ttcgtgacag
    10021 ctttgatggt ctgctggctc cggagaaaac ccgggagctt cggctggacg acgtggcggg
    10081 gctcctctcg cggggcggaa cgattctggg caccaccaac cgtaataatc cactccgtta
    10141 tcccactcag gaaggcagcc aaaaagtccg cgacatgagc gaccagtgta ttgttaacgc
    10201 tcgcacgctg ggcctggacg ccatggtcgt ggcggggggc gatggaacgg ccgcgattgc
    10261 gctggagctt taccgcaaag ggttgccggt tctctttgtg cccaagacga tcgacaacga
    10321 tctccaggaa acggagatga gcgtaggctt tgacacggcc ttgcacacgg cctcagaggc
    10381 gctcgacaaa attcatacgt ccgcagagtc gcatcaccgc gtgatgatgg tggaactgat
    10441 gggccgcacc gccggatgga tcgcgcttga ggccggcatg gcggcaggag cggacgtgat
    10501 tctgatcccg gaaataccat ttagattgca gaacgtctgc cgggccatcc agcaacgcga
    10561 aagttcaggc aagaatttca ccatcatcgc catggcagag ggaattgcgc ttccggcaga
    10621 tttggccgca gagcacgacc cgcatgacgg ccgcacgggc gagatcatgc ggacggccat
    10681 cgctcgccaa accgggaagg agacgcgcct gacggtgctg ggccacattc aacgcggggg
    10741 agcgccatca ccctatgacc ggctgctcgc gactcgcttc ggagtgaagg ccgtggagct
    10801 ggcgtcgaaa ggcgcattcg ggcagatggt gtgcctgcgt gaaggactga tccagagctc
    10861 cgccttggag aacgcggtgc gcggtccaag gcttgtgaat cccaatgggg aaatggtgag
    10921 agcggcccgg gcgatgggaa cgtgctttgg cgattaatcg gcaatgcgtc tgagcctaga
    10981 gccaatatac tgaacgctcg cgtccacgcg ccgtaatggc atcggggcaa gctgccatca
    11041 cattgattgc cttcgcttcc agaattgcga accaggccag cgcagtacgg cactataaaa
    11101 ctggcggcgc acagaaagat aaccattata ggtttcctgc acccaggcaa cgtatgaatt
    11161 aaacgcgtct ctgttgcctg cgagatagcc ggcaattgcc gcagcgcatc gcgtcccact
    11221 ctcaatagat ttaagcacgc cctgcccgga cagcggatca aacgcgaggg ccgcgtcgcc
    11281 cgtagcaatc cagttcgcgc cggcaacggg atggcgcacc agagagccgg ctgaaacgac
    11341 catagatggc gggaggattt gttttgttcc cacgcgctcg aaagtcagtg gcgccgctgc
    11401 tatcagctca tgccagcggt ctgcattcca taagtcggaa tcggtcatgt aagcgaagac
    11461 catgcggtcg cggggcagtg gggcagagta ccaccaccct tcttcagcgg cttcgatcaa
    11521 agtccaccgc gctggttcag gcagatcaca gaaggtaacc gccccaatca gccggtccgc
    11581 cacatcggcc tgcgctccca gccggctggc gagcaaggcc ttgcgtccgg tggcgtctac
    11641 cagcacccgg ccagagaagc tgagattagt tttgtcatga accacgtcga gctggcacgg
    11701 accgccaatc gtcatgcagg atttcacatg cgcggagagg agcagttcgg ctcccccgtc
    11761 ggcagcagcg gcggccagca tggcatcaaa gcgggcgcga tcaacgtgcc atccgcagcc
    11821 gtatggattg ttcaggaaat cccgatgacg cgcggtttgc gtctcccacg ccgtgcgaat
    11881 gccgtacgac tccagtggtt cggtcgagag aaagcgctcc cagacaccca actccatcaa
    11941 cggctgtcgt atttggggtg gcagtgtctc gccaacgcga agattctcgt aggcggattg
    12001 ctcgattaag gcaacgcgga agccgcggcg gcttaggtca agcgcagtca ctgcacctgc
    12061 cggcccgccg ccggcgacca caacgtcgaa tgaattcatg ccggttccgg gagaaggcta
    12121 cagcgttcgc tcggattcga tgatggcatc accactctgg accatgaagc ccagaccgct
    12181 ccagaaattc accatgtcct ggaagctgtt catccctcgg tcccacgtca cgtaattgtt
    12241 cgaggtcgca gtaaatacgt tgtcaggatg cgccgctggc caccacgata acggtgactg
    12301 gaacacgcaa tcgaagaagt ctgcctgcca gggtatcgcc tgctgcttgc tgagatcacc
    12361 ggcactcagt tggctgccat caagccggaa cggctcgaca tacgggtaca cgtcacgggt
    12421 gaaaaagctg gtttcgattc ccgggaagaa cggaccaccg ctgcagttct ccagagctgc
    12481 gcgagtgagg ccgtcaggag tgacattcgt atcgagcgcc ggcggtccaa cccagtcgtt
    12541 gatgaagttc ccggctgccc agttcttcat cacgttgtac tgcgttggag tcagtgcatg
    12601 gttcgcccaa tgtccggtgt tgggcgatcc gtggcctctt tggaggaaaa gatcggcaaa
    12661 ggaatccgtc cagattgccg gcatgagatg cggcgtatct accgtgggtg taatggccgg
    12721 atcgcgcaac gcctgaaaaa tcgcgttccg ctggtcagcg gtggcgggcg ggggaatcac
    12781 cgcaggcagt gggttatggt tgttgccgat tttggtagta acccactgat agtcgatggc
    12841 cttcttgatg atcggataaa catcttttgt gaacgaaggg accgtcggca ctttgaaacc
    12901 caggcggtcg accgcggact ggagaagtgc gtcatacagg ctgatgatgt ggccgatcgg
    12961 cggtgcgaag cgcggcggag gacagatcac ccatgcgcca ctggcctgaa ccggtggttg
    13021 gttgccgtgg agtgtcaccg tcgcggtcac aggaccatcg gaaacgtcgt cgtgccagcc
    13081 gtcgttgttg gcaaacgtta cgagcggcgc gttggtgggc gaactggaag agccgaatcc
    13141 gccaagtacg aggagacggc cgttcgcgtc ggtctgaatt tctcccagcg acactggggt
    13201 tcccaggaaa ctgccggtgt caaaaagcgc ggttccgttg ggaccggtca gcgtgcgcgg
    13261 accgggtgta atcatgagcg agctgcgatc ggtcaccgag gcgtttctga gcgggcccgt
    13321 acggccaatc ccctcgaacc ggttaaacgc cgccttcttg ttcgcaagtt cgacagtcca
    13381 cgtgatgttc gcgacggacg aggtaatctc gcccatgaag acgccgtttt cccacccgta
    13441 aacgcggaat cgggcggcct ggcggcgaac acgcccctgc gcgtccttgt agccattcgt
    13501 gggaacaata accgatcccg gaatctcggg tcccacatag aaaccggaag gagaatcatc
    13561 ggggcagttg ccgattcggg cgacgccaat cgaagggaaa atcttgaaaa cccagctcat
    13621 gggtaaaatt cctccgcctt aagccaacgg cgaccaggga gcgagtctat aaattgcctt
    13681 tgcggtcgtc ctcgcgccgg atccaaacct ggcgaccgac tcttgctgca tcgccatcca
    13741 ttgcccgtca ccatcaagtc tgtcccacac ctgctggcgg gcggcaaggc tctcaaatgg
    13801 aagcacgtaa gtgaaccttg gcagatgctc accagcaacc gtggctccag ccacaatggg
    13861 atgagcgcca atccggctta aaacggagct gacttctgga gccggtccgc cgcgccacgc
    13921 tgcggcatgc caggttcgaa cttcaaataa ccccgacttc aaggacgcgg actgtgcggg
    13981 gaatcgcact gattccgcgt tgacgactaa cacctgagat cgaacatcgt cgagcacctg
    14041 cgctgactcg attcctgccc aggcgcgacg tacgtgcgga tcagccgcaa tgcgcgcgcg
    14101 ctcctcgagc atctcatcga agcgggagta caccgtgagc agcagcgttt gtggcgtatg
    14161 cggcgcaacc acagcctcca aacacatcgt ggaagagttg cgcacgtggt ccgtggcagg
    14221 gagcaacgcc tcatgaatgt aggagcgcag atgttccacc tgaccggcat cgatgacgct
    14281 gaagctctcg agtgcgatca ctcgcgtccc attttcaggt cgcacgttct ttgcgaatgc
    14341 gggaaacgta ttgagggcgc cggctgcgcc agcggatacc ccaagccagt aaagcgcgga
    14401 gcgacgggag atcatgtgga atagaccctt tccccgaagg tattaaagcc gcatacacgt
    14461 atacgacccg acttcggtcc actcagctcg cgcccgagat tctgctctta cgcaggtcgg
    14521 agtgtcaatg caaaaagttg aggggtttgc gcggcgtgtg agccgcgagc cgaaatcctc
    14581 agagcgcggc gagtcgaagg aacccgacaa ggagtggcgg agggagaggg attcgaaccc
    14641 ccgatacggt ttcccgtata gcggttttca agaccgcctg tttcaaccgc tcacacatcc
    14701 ctccgcgtga gcacatattc agtttaccag catatcccgc agcacaaggc cggctctcac
    14761 ccgcggcggt gagccgcgtc actgagcgcg aatgtcagct tcgctacgct ggaacaaaga
    14821 ggaggcgcgt atgcgagtcc aggaagtaat gacgcccgat cccatctgct gcacacaaaa
    14881 tgacgacatt gcttcggcgg ccgcgataat gacggacgga agcacgagca tggttccggt
    14941 taccgagtat cactatcgtc catcgcggtt cctgggcgtg atcacacagc gcgacctgtg
    15001 cggcgcggtg gcccaaggca aggaccctgt ggcaacgcgg attgaagaat gcatgtccgc
    15061 aaactcgcca agctgtctgc cgaccgatga cgttgcgcat gcgttgcgtg cgatgcgtgc
    15121 ctccggcctg ctccgcatcc cggtactcag ccacaaaaag gagctgcttg ggaccatttc
    15181 catgggcgac atcattcgcc accacgccgc cgacagtggc gaacttttca gaacgctatc
    15241 ggtcatcgcg attaccaacg ccccggccaa ggtgccggtc gcgaaattca ggacttacac
    15301 acgtgacaag ggtttttctg ctgcgtcgtg agcttgaaaa tcagaatctt gatcaccctt
    15361 ctttgagtcc tttaagaagt tagcgcctgg ctctgaatgc ggtgcagcgc aacttctcag
    15421 aatttcatcg tcccgccagc gcgaaaaggg gtaacatctt cagatcaccc gtagcagtcg
    15481 gggagcatct gcactaaagc ggccactcgg aagtgggatc ttcgctcgcg gagggcagta
    15541 tggggaaccg ttcttttcaa ctgcagtcct gggccacagt tgcgctttca gtttgtctcg
    15601 ttgcgccact ggcattggcg caacgcagcg gaggcactgg cacgccgtca cgtggaacga
    15661 gcactccgcg caacactacg ccggatccga acgcccagcc cacattcatt tatggtcgtg
    15721 tggcaatgga gggtggcggc gcgctctcag agccggtggc gattgagcgc gtgtgcaacg
    15781 gagtggcgcg acgggaaggc tacacggatt tcaaaggaca gttccaactc cagcttgggc
    15841 agaacttcgg cttccaggat gccagcgaga acgatccacg cacctcgccc acggccccgg
    15901 tgcggccttc agggcagagc gtgagccgtc aggcaatcaa cctgcaaggc tgtgagtttc
    15961 gcgccattct ggccggcttt gtttccacca cggtgagcta ccgctacacc ggcgactcat
    16021 tccagacgga cattggaacc atcatgctga agcgcatggg tgatggccgc ggcagcaccg
    16081 tgagtgtaac cagcatgtcc gcgccgaaaa atgccaagca ggcattcgag aaggcggaaa
    16141 gggcgtattc ggcgaacaaa ctggaagacg cggaaaaaga gctgaacaaa gcggtacgtg
    16201 attatccgca gttcgctgcc gcctggtcca tgctcgggga tatccaccag aagggccaac
    16261 agctagagca ggcgcgcggt gattatgaaa agtccatcgc ggcagacccg caatacgtga
    16321 atccggcgtt tggtctggcg ctggtggcga ttcaggagaa aaagtgggag gaagccgcgc
    16381 gcttcaccgc gcaagcttcg tcactgaatg cttacgccta ccccgtagcg tacttctaca
    16441 acgcggtttc aaactacaac ctgggcaagt acgacgatgc ggagcacagc gcgcgcaaat
    16501 ataaaagcgt ggacgcggag cataagcatc ctgacgtttc attgctgctc agcaccatcc
    16561 tggagatcag aaaggattac gcgggtgcgg cgcaggaaat tcgcgagtac ctgcagaatg
    16621 tgccggattc accaaaagcc gaggaactga aatccaggtt gaagacgttg gatgatttga
    16681 gcgtagccag caaccagcag cagccgcggc aatagaaatc agacaatccc attcttaaac
    16741 gataaaacaa tgagccgcgg catgccgtgg cttcactttt cacggaaacg aaacactacc
    16801 ggcgccgtga aactttctcc agtcttcaga ttgcctttgt tgtccagctt gttccagccc
    16861 acgttcgcgg ttacataaat ccaaccgtcg tgagccgcgg cgtgggtcgg ttcgcccagt
    16921 ccttcaaagc cctgcgccag cacctccacg gactcaatac gagtttgctc gggattgagt
    16981 tggaaacgca ccacgcgggc cggctctact ccgttttgca cgccgataag agaatttccg
    17041 gtgaggagaa gaccgtcaat accggtgcag gcaatatttt cgggatgagc aagataagtg
    17101 acgctcttgc tgtgaccgct cgggtcaacc acggcaatgc ccagcgagta gtcggccacg
    17161 aagagacgtt tgccgtcgcg cgcgagcgct ggcgtctggg gcgagaagag gccttccgcg
    17221 attttctcca gctttgccga cttcacatca ccactgacgc gatagctgcc gtcccccaaa
    17281 ctgtccccga ggtagacact tccgtccgcg ccgactgaca tgtctcccag aagcgccgga
    17341 gttgatgagc caaggtctat ccgtcgcaaa agtttcccgg tttgcggatc gatcgccagc
    17401 agtgcggtcc tgccactatc ttttttggga acgtctggga aatcgggaat tgccgctgtg
    17461 ctcgcccaaa gaagctttcg ttgggggtca tacgaggtgg cgagcacggg ccagcgcttt
    17521 gcttcaggag gaagaccaag ctcctgcaag atacagtttc ctttgtcggt tcgggaaagc
    17581 gaagcgcgat aaagcgaatg atggcgcacg ctactgagaa tcaaggaacc tgacccgtca
    17641 aaagtcaggt cttcaggcat caggtccggc acaggaagcg tgcagaactt ttggacttta
    17701 ttgaccggaa ctgcggcgcg cttcatctcg tccgcaactt tgggccatgc ggggtcgctt
    17761 agcagtggct ttagatcgtc atccgcggcc acgtcatagg tcaggcccat ggctgcatag
    17821 cgctccagcc aattcaacgc ctctgtattg tttcccagat gggcttccac cgatgccctg
    17881 cgcagcaggt aaaccggggt tggggcagga agctctttgc cgatttcgag cagcacctcg
    17941 cgcagcgcct tccagtcctg cttctgccgg agttcacgcc cctttttgtt gagctcatta
    18001 aaatgccggc ggtccatggc caacgctgtt acagcgaggg cggggaccac atagatcaaa
    18061 agaaggcagc gtttcatgga ctctccggca ggttagacgt atcaaggaca atttggcttc
    18121 gctggcatag caaggagaaa actgcgtcca attttgttca ccagaatttc ccatctggta
    18181 atttttttcg gttcgcttta gcatcgccca agtggctgca tcgggacaaa acgagaagga
    18241 tttgaatcgc gagcggctgg tttcagccgt ccaagcggac gatgatgcct cttttgagct
    18301 caagctgcgg ccgaagtacc tgcgcgaatt cgtgggccag cggaaggtga aggaaaacct
    18361 gcaggtcgcc attgaggctg cccgcacccg tggcgaagcg ctggaccacg tactactcta
    18421 tgggccgccg ggtctgggca agaccacgct cgccaccatc atcgcgaatg agatgggtgt
    18481 ggactaccag cagaccgccg gaccagcaat ccagattaag ggcgacctca cagcgattct
    18541 cacgaatctt cgcgaaaagc aggtgctttt ttttgatgag gtccaccggc ttcagccggc
    18601 actggaagag atcctctatt ctgctctcga agattacaag ctggacatca tcatcggaca
    18661 ggggccttcc gcgcggacgc atacgattga cgtgcatccg ttcaccttca tcgcggccac
    18721 cacgcgcgcc ggattgcttt cagcgccgct gcgctcgcgt tttgggatca tcctgcggct
    18781 tgagttctat gacacggagg aactcaaatt catcatcgag cgctcggcgg agattttggg
    18841 cgtgcagatt gatgacgaag gcgcgaatga actggccggc cgggcgcggg ggacgccccg
    18901 catcgctaac cggctactaa ggcgagtccg cgattttgcc caggtccgcg gcggaggcaa
    18961 aatcgacaaa gccaccgccc aggccgcgct cgagatgctg gaagtggata agcacggctt
    19021 tgatgagatt gaccgccggc tgctcctgac tattatccag aaatatggcg gagggcccgt
    19081 gggacttggc actttggccg cagcgcttgc agaagagccg gaagcactgg aggagattta
    19141 tgagcctttc ctgatccaga taggttttct cgaccgcacc ccccgtggcc gggtggccac
    19201 ccggctggct tatgaccatt tcggaatccg ttacggacgc cagccagatc ttttctaaga
    19261 atcttctcag gcaatcgccg tcttcccaaa atgtaagttt ttggttacgc ttctgagacc
    19321 taccgtaatc cataggcagc aaggagtttt cgttttggca cggttcttcg caaaggcccc
    19381 gaaacatcgc gggcccaagc tgccactttc aggtttgctg gcgttcatcg ctattctggc
    19441 gagcggcttc gcgcgcgcgc aggagcccgc gtccacgcca aagccagcac cgcccagcct
    19501 tgccgctgag atttcgtcgc ttgatgtccc ccggctggaa atctcaccca agctcagcga
    19561 ttttgaaggc gagggaatgg aaccggtaac gccgcttgcg cgaaaaatgc ttaaagtcgg
    19621 acggtttgtg cagcgcgatc cgaaagatgg cgcccctgtg agtcagcgca ccgaggccta
    19681 catggggtac accgagcgca gcttttttgt agtgttcctt gcattcgaca gcaacccgag
    19741 actaatgcgc gcgcgcatgc tccgccggga acaaattgac gatgacgacc aggtagggct
    19801 ttttctggac acattccacg accatcgcca tgcctatatg ttctacgcaa acccgtacgg
    19861 aattcagcag gatgctctgt tctcagaaac tgacgggccg gacctttcct gggacaccgt
    19921 gtggcgcacg cagagcaaga tcacccgaca ggggtacatg gtggagttcg acataccctt
    19981 caaatccatg cgcttccagc cttcagcgga gcatacgttc gggatcttgc tgggccgtgt
    20041 aattccaaga aacagcgagc gatcgtacta ccccgagaac tcgtctacca agcagggctg
    20101 gctgatccat gagggcgaca tcaaaggctt cgagcagatc tcaccgggcc gcaacatcca
    20161 gttcattcct tacagttcgc tgagcgcatt ccgtgatctg gaccagcgcg atcccgcggg
    20221 ggaccgcttc agcggcaagc acctgcagcc gaaggaaggc gtagatgcca agatggtcct
    20281 gaaggacagc ttggtggtgg atgccacagt gaatcctgac ttcggccaga ttgagtctga
    20341 tgatccacag gtcacggtga atcagcggtt tgaagtcttc tttccggaga agaggccttt
    20401 cttccaggag aactccagct actttgccac gcccatggcg ctgctgttca ccaggcgcgt
    20461 ggtggatcct ctctatggtg cgcggctcac cggcaaggtg ggacagtggg atattggcag
    20521 ttttgtcgca aacgatcgcg cgccgggcaa ggcagtgatt gatactgacc cgctttccgg
    20581 taatgatgcg ttcttcggcg tgtttcgcct taaccgcgag atcggaaaga acaacagtgt
    20641 cggcttcatc ttcactgacc gggagctgaa cacgaacccc aacagcttct gcaccatcac
    20701 agaatgtatc gtccgaaaca accgggtggg cggctttgat acccagatca agctgaacca
    20761 gaactggcgc gtcaacgccc aggctgtgac gagcgagacg gaattcaatg acggaacgcg
    20821 gctggccggc cccgcttatc gcgctttggg cgaatacagc tcacgcaagg tcgagttcaa
    20881 ctcgacttat gacgacatct caccaggctt caccacggaa gtgggcttca tcccgcgcac
    20941 tgacatgcga cgggtgaaca actttgcccg gtatttcttt cgtcctgaag gcaaggtgct
    21001 cactgctcac gggcctttcg tggttgagca gtcactgtgg gaccacagcg gatcaagcct
    21061 gctgcaacag gcaatggccg gttatgaatg ggacctgcag cggagcagct tcatcaatct
    21121 ttttgcgctc gcggaggatg agagcctgcg gccgattgac tttactgctc tcccggcgaa
    21181 tcgcggatac aggcaccagc agggcggaat caatgctgcc acgcaatatt tcaaatggct
    21241 gaacctgaac gtggagtacg agatgggaac caccaccaat tttgttcctg ctatcggggc
    21301 ccccgtcctg gcaaattaca gttcaggctc tgctcgcgcc gtggttcgcc ccaccaaacg
    21361 tcttacggtt gagaatactt atctgctgac ccgactccgc aatcaggaca gcaacctgaa
    21421 catcttcaac aaccacatct tccgctcgaa attgaattac cagttcacca aagagttctc
    21481 actgcggcta atcgggcagt atgacaccac actcggcaat ccggcgctga ccagcctggt
    21541 gaataccaag cacttcaatg gcgacgtgct cttcacctac atggtgaccc cgggaaccgc
    21601 aatctacgcg gggtataaca gcaatctgca gaaccttgat cccacgctcc agcatgatgc
    21661 cttggggaac ctgctgcgca cccgcagcaa tttcatcaat gatggccgcc agatctttat
    21721 caaggtctcc tacctcttcc gctactgacg ctttcgcggc cattgcttta gagtaaacac
    21781 tgatgacgaa aaccagagtt ggcgttctat tcggcggacg cagcggcgaa cacgaagtgt
    21841 cactgctttc agcagcttcc gtgatcaagg caattaacca gaagaaatat gaagtagtgc
    21901 ccatcggcat caccaaagag gggcgatggg taagcgcgcg cgaagcggaa aaattgctgc
    21961 gcggtgaagc gctggcgccc tcgcacggct tgcgcgcggg cgatccgcag agcacggcct
    22021 ctgccgcggt gctggccaga ggcgaggcgg tgattatgcc gccatctccg gaggcgcacg
    22081 ggctggtgcc gctggaaagt gctgccaaaa accaaggcgg cgccattgag gtggatgtga
    22141 tctttccagt gctgcacggc actttcggag aagacggcac tattcagggg ctcatggaat
    22201 tggccgacct gccttacgtg ggcgcgggcg tattgggctc ttccgccggc atggataagg
    22261 acgtaatgaa gaagctcttt gccgccgccg ggctgccgat tgtgagacac gtgaccgtgc
    22321 tgcgctcgcg ctgggaaaaa gagccgaaga aggcggtgaa agacatcgag ggcaggctga
    22381 agtatccggt ctttgtgaag cccgcgaatc tcggctcttc cgttgggatc agcaaggcgc
    22441 acaataagaa ggaactgcct accgccatgg acgaagcggc ccggttcgat cgcaagatcg
    22501 tgatcgaaca gggcgttggc ggcaagaaac gcaaggcgcg cgaactggag tgcgcggtgc
    22561 tgggcaatga tgatcctaaa gcttcaattg tgggtgagat cgtcccggcc gcggagttct
    22621 atgactacaa cgcgaaatac gtggatgaag gatcaaagct gctgattcca gcgcccatag
    22681 gaaaaaagct cgcgaagcag gtgcaagaga tggcggttcg ggcgttccag tcagtggatt
    22741 gctctggcct ggcgcgtgtg gatttcctga tggatccgga caatgaacgg atttacctga
    22801 atgagatcaa caccatgccg ggctttacct ccatcagcat gtatcccaag ctgtgggcgg
    22861 ccacgggaat tgagtattct gagttgattg gccgactgat tgagctgggc ctggagcgct
    22921 tccgggaaaa gaagcgcaac cagtacagca aaaattaacg ccggtttcat gtggtcgctg
    22981 tctggcaagt agcaacatag aactgaaagc aagcacgtat gaagaaggcc gtccccagcc
    23041 tttttgttct gatctttctg tgcgccgcgc cgctacgtgc gcaaaccgat accggcagcc
    23101 tggaaggcac ggtggtgaat gcccagaatg agcgcgtaat tccgcgtgcc accgtgctgg
    23161 cccgcaacgt gaaaaacgcg agcgacgtta cttctgttcg cgccgatgac tccggccact
    23221 tcgccttcac caatctcaag gcgggcgctt accgtataac cgccgagcag cagagctttt
    23281 acgtggatcc gcaccggcga atctttcagc ctgtagtaga agttgctgcg ggagagctgc
    23341 gcagcggtgt tgtggtgcga cttcaaccta ccgcagtggt aaccggccag atcgtggatg
    23401 agcataacga tcccatggag cacgtgcagg tgaagctgct ggcgcgtgaa taccacaagg
    23461 gccgcctctc actcactatg gcggggctcg ggctgaccga cgatcgaggt gaatatcgga
    23521 tttacgatgt gcgtccggga aactattacc tgctggcgga agtgaatccc gcgctccgaa
    23581 agaaaggagt ggaggtgatt gccaccaccg ggatgacggg cgtgatcgac cgcagcgggc
    23641 tgcgaaaaga agatggtggc ccagttccgc cggcgccgta cacttttccg cctcagttct
    23701 tcccctccac acgcgacttc ctggatgcaa cgtctctgcc gatccatccg ggcgatgaga
    23761 cgcacggcga ttttgttatg ttcagcacgc caagcgtgag tgtgagcgga gtggtcctaa
    23821 acggaatgac cggtgaccgc gtgaacaacg cggctgtggc ggcttactgg acggacattt
    23881 tcgggggcgc tggagggaac atcgccgcca cgagtaaacc aaatgg
//
LOCUS       DASQYP010000065         3677 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_67318, whole genome shotgun sequence.
ACCESSION   DASQYP010000065 DASQYP010000000
VERSION     DASQYP010000065.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 3677)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3677)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3677
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_67318"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..444
                     /gene="era"
                     /locus_tag="VE783_02090"
     CDS             <1..444
                     /gene="era"
                     /locus_tag="VE783_02090"
                     /EC_number="3.6.5.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR00436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0019843 - rRNA binding [Evidence IEA];
                     GO_function: GO:0043022 - ribosome binding [Evidence IEA];
                     GO_process: GO:0042254 - ribosome biogenesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase Era"
                     /protein_id="HYX52211.1"
                     /translation="LLDKIIRALPEGPRYFPADQFTDQPERFIAAEIIREKVLLKTGK
                     ELPYATAVVVERYEELPKLTRIAAAIYCERDGQKAILIGKGGQKLKDIGTAARLDIES
                     LLGTKLYLELFVKVKPGWRQSQVFVEELDWRNQLTALAERPEPEE"
     gene            1380..2273
                     /locus_tag="VE783_02095"
     CDS             1380..2273
                     /locus_tag="VE783_02095"
                     /inference="COORDINATES: protein motif:HMM:NF037417.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52212.1"
                     /translation="MPFPQKKQITNDEILAAIKDCAEKLGRAPSTDELKKMTGGKIDR
                     AFVARRLGNYTRALEICGLKRHDKAKPRTIMELFVAWATAARRLKRMPTFSEMTPEAG
                     ISAHCYLRKFSKWTMVRDGMRKFMEDEKLEGEWADVADLIRKSAPKRFQKLATALPID
                     TERIQAQTRTRKTVLETGLELVQDALEDYDRPLYGDPINHPCMLNAPTNEDGVLGLFV
                     AMARDLGFIVTRVQRAFPDIEALRKMKGGRWRMTRIELEFESRSFVAHGHDPKGCDLI
                     VCWVHNWPECPVPVIELSKFF"
     gene            complement(2537..3445)
                     /locus_tag="VE783_02100"
     CDS             complement(2537..3445)
                     /locus_tag="VE783_02100"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52213.1"
                     /translation="MRLWAFCALLFIVALPVLAQVQTVGDLSFAVPEGWEYQGKPDGG
                     LMLLKQGQNFWVVTVYAPRPASGNQNADFKTAWQAVISSIPGFAKSLPGYNPYDINKQ
                     TLGYPGKTYDGASDNGQMYVRLYTLETGKAVIPVAVLTLNRQVLDSLNHIVEAVVGSV
                     RVAPLKASPIRNTLSMADLVGEWHAGMTSARMYYDRYTGAYAGSSTTAYSSRYVVGSN
                     GSFTYEMGGLWNSRPVEDKDAGTVELSGDLVNFKGRLHEQKYHFVNLQTAIDGSTVMT
                     VLAGQEDPAKANVSQVGQQLVKEAKK"
BASE COUNT          915 a          955 c         1129 g          678 t
ORIGIN      
        1 ctgctcgata agatcatccg cgcgctgccg gaaggcccgc gttattttcc ggcagaccag
       61 ttcactgacc agccggagcg cttcatcgcg gcggaaatca tccgggaaaa agtcctgctc
      121 aagaccggca aagagctgcc atacgccacg gccgtggttg tagagagata tgaagagctg
      181 cctaaactca cgcgcatcgc ggcggccatc tactgcgagc gcgacgggca gaaggccatc
      241 ctgatcggca aaggcggaca gaagctcaaa gacatcggaa ccgccgcccg gctcgacatt
      301 gaatcccttc tcgggaccaa gctctatctt gagctgttcg tcaaggtgaa gcccggctgg
      361 aggcagtcac aggtgtttgt ggaagagctc gactggcgga atcagctcac ggcgctggcg
      421 gagcgaccgg agccggagga gtagccgggg atttcacgaa aaggacgcga ggaacgcgga
      481 ggaaattgcc gcgaaatgcc aaaattgccc aaagaatcca aagtgaaaac tggatcgccg
      541 cagatttacg cacatgagcg cggatcagaa cggtctggtc tgaaagcaac aacttatggc
      601 ccagcttcga gagcgtgaaa aaaatagttg tgaagtgacg tccccaaaat cagaaaaatc
      661 ggtatataga catataggga gacaatcgcc ggaatcgccg tgatcgccgt aatcgggggc
      721 aaacgcggcg gcctgtccag caccagcatc tccgaaaatc aacaacttac gagcgcgtgc
      781 acggaaaaag atttccacag gtgtccccag acccgggggt aatcgcacat agtagatagg
      841 agggcggttt gatcgccggg atcgctcgta atcgccggga tctgaaagca aaagctcacc
      901 actgatgaca ctgatccgac tgatttgcac tgattgacga cacgcaggca agagtgcctg
      961 cgctccaggc ctttgattcc aaaggaaaaa taattttcaa gggaatttgt ccgggaggtg
     1021 gggggtaaat cgcacagtat ctacaggtgg ccgaaggaat cgccgggacc gccgtaatcg
     1081 aagtaaaagg tcaccgctga tgacgctgat gccactgatt tgccctgaca gaagacaaaa
     1141 gaaaatattc ccaaatccct aatttagaca gcggaacaag aaccttgagg atttcgaggg
     1201 aataaggatc ccctcgctca tgctcgggaa taaccagaaa agccgctcgg gattctgaaa
     1261 tgtagacact aatcgaacat ctgcgcaggc aagagtgcct gcgctccaaa agctttaaaa
     1321 aaaaacaaaa aacaaagcca cccagaccgg gcggcttttt tatttgagag gaccgaaaca
     1381 tgccattccc acagaagaag cagattacga acgatgaaat cctggccgca atcaaggatt
     1441 gcgcagagaa gctgggccgg gcgccctcaa ccgatgaact gaagaagatg accggaggaa
     1501 agattgaccg ggcattcgtg gcgcggaggc tggggaacta tacgcgcgcc ctggagattt
     1561 gcgggctgaa acggcacgac aaggcgaagc cgcgcacgat tatggagctg tttgtggcgt
     1621 gggcgacggc cgcgcgccgg ctgaagcgca tgcccacgtt cagcgagatg acgcccgagg
     1681 ccgggatttc cgcgcattgc tatctgagga agttcagcaa gtggacgatg gtgcgggacg
     1741 gcatgcgcaa gttcatggaa gacgaaaaac tggaaggcga atgggcggat gtggccgacc
     1801 tgatacgaaa gagcgcgcca aaacgctttc aaaaacttgc gacggcactg ccgattgata
     1861 ccgaacggat acaagcgcag acgagaacaa ggaagacagt gctagagaca ggacttgagc
     1921 tggtgcaaga cgctttggag gactatgatc ggccgcttta tggcgacccg atcaaccatc
     1981 cgtgcatgct gaacgccccg acgaatgaag acggcgtgct gggcttattt gttgccatgg
     2041 cgcgcgacct ggggttcatt gtgactcggg tgcagagagc gtttcctgac attgaggcgt
     2101 tgcggaaaat gaaaggaggc cgctggcgga tgacgcgcat tgagctggag tttgaaagcc
     2161 gaagttttgt ggcgcacggt cacgatccga aaggatgcga cctgattgtg tgctgggtgc
     2221 ataactggcc ggagtgtccg gtgccggtga ttgagctgag caagttcttt tagatcgccg
     2281 gaatcgcgcg tgatctggtg atcgggggat cggagggagc agagagcgag gatttgaaaa
     2341 gctgctagct gctagcttga ggcgagcaga agcactcagc aatcagcagt cagcattcag
     2401 cccatcgaca taatcgtgct cttcaggaaa tacggaaacc atttgccgcg agctacgcag
     2461 agagcgcact ggaacctgcc gctgaacgtt gcgataggga tccctcgctg cgctcgggag
     2521 tgaccccaag agcgcgctac ttcttcgcct ctttcaccaa ctgttgcccg acctgtgaga
     2581 cattggcttt tgccgggtct tcctggccgg cgaggaccgt catcaccgtg gaaccgtcaa
     2641 tcgcggtctg caggttgacg aagtgatact tctgttcgtg gaggcgtccc ttgaagttca
     2701 caagatcacc gctcagctcc acggtgccgg cgtctttgtc ttccacgggg cggctattcc
     2761 aaaggccgcc catttcataa gtaaagctcc cgttgctgcc gactacatac cgagagctgt
     2821 aagcagtggt gctgctgccc gcgtaggcgc cggtgtagcg gtcgtaatac atgcgggcgc
     2881 tggtcattcc ggcatgccac tctcccacaa gatcagccat ggacagcgtg ttgcggatgg
     2941 gcgaagcttt gagcggggcc acgcgcacgc tgccgaccac tgcttccaca atgtggttga
     3001 gcgagtccag cacctggcga ttgagcgtga gcaccgccac cggaattacc gccttgccgg
     3061 tttcaagggt gtaaagacgg acatacatct ggccattgtc actggcgcca tcgtaggtct
     3121 tgccgggata gccgagggtc tgtttgttga tgtcgtaggg attgtagccg ggaagcgact
     3181 ttgcgaagcc gggtatgctc gagatcacgg cctgccacgc ggtcttgaaa tcggcgttct
     3241 ggttgccgct ggcgggccgg ggcgcgtaaa cggtgacgac ccagaaattc tggccctgct
     3301 tcagcagcat gaggccgcca tccggcttgc cctgatattc ccagccttca gggacggcga
     3361 aagagaggtc gcccacggtt tgcacctggg ccagtacggg cagggcgacg atgaaaagca
     3421 acgcacaaaa ggcccaaaga cgcataaagg cgagtcctcc atggagggga gtgagagccc
     3481 ggagcccgat ggcgtggtga ttttaccgca gagaagccgc gaagatcgcc ggaatcgcgc
     3541 ggaatcggaa aagccccagc gccgtaggcg cgaaatgagt tagcccagac caggtttggg
     3601 tagccggtca agaagaactg gagcgccgta ggtgcggcac atcatccgaa gacgtattca
     3661 ggatcaaatt caattcc
//
LOCUS       DASQYP010000066         9053 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_299429, whole genome shotgun sequence.
ACCESSION   DASQYP010000066 DASQYP010000000
VERSION     DASQYP010000066.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 9053)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9053)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9053
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_299429"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(162..1442)
                     /locus_tag="VE783_02105"
     CDS             complement(162..1442)
                     /locus_tag="VE783_02105"
                     /inference="COORDINATES: protein motif:HMM:NF033542.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS110 family transposase"
                     /protein_id="HYX52214.1"
                     /translation="MPYRIAGIDVHKKMLAVVMADIEVAGEYQFERYRFGSNPEQLLA
                     LCRWLSDHRAEEVVMESTAQYWKPVWGALEQFWQPDCKQRENAGPMAGALHLAQAESN
                     RGRRGRKQDFADAERLVKRLVSDELVLSLVPDPEQRLWRAVMRRKHQSTRNRVQLQNR
                     LEALLEEMHLKLSSVVSDLLGVSARRMLKAIANGETDATKLASLADQRLRATPEQLCD
                     ALGASRELNPVYRRLLRMLLVELGLLERQVRQLDQEMASLLRPHQDAVKRLAEVPGLG
                     VDSAQQIIAEVGVTASTFPSPKHLASWVGACPGEQESGGVSKSHRSPKGNRHMRRILN
                     QSANAAVKVKGSIFENVYRRLVPRLGHKQTIGAIAHRLCRLIWIILHRRARYEERGPA
                     VSQKARRIRTTKMIKELRNLGYRVEPPTIQPAVS"
     gene            1725..2450
                     /locus_tag="VE783_02110"
     CDS             1725..2450
                     /locus_tag="VE783_02110"
                     /inference="COORDINATES: protein motif:HMM:NF014035.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HYX52215.1"
                     /translation="MPSHPLLLALVALVASTLAAVTGFGGAAVLLPALVSAFGVREAI
                     PILTVAQLIGNASRVWFNRQSLDYRVVAWFALGGVPTALLGGYLFAHAPLTALTRALG
                     IFLLLVVLWRHLHPSPPGKFPVQVFAGIGAGASFLSALLGSVGPLMAPFFLAYGLIKS
                     AYIGTEALSTVVMHVTKLFAYRQTAVLTHFGMLAGLALGPIMILGSFLGKKIVDKLPE
                     KVFVLLIEAVLIAAGLLFLVRGR"
     gene            2647..2796
                     /locus_tag="VE783_02115"
     CDS             2647..2796
                     /locus_tag="VE783_02115"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52216.1"
                     /translation="MSIYRCKLPHFEKDGASCFIMFHTGDFTLNDDTKLFLIRDDETD
                     APQWA"
     gene            3030..3344
                     /locus_tag="VE783_02120"
     CDS             3030..3344
                     /locus_tag="VE783_02120"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52217.1"
                     /translation="MTIYRRKLPHLERDGGSCFITFKARDDLSLNDDAKWLVLDHCLY
                     DDGKRYELESVVVMSTHVHLILTPLPDGLGFPVGNNHECHQGSIITQRQQALEEKRFA
                     LD"
     gene            complement(4069..4218)
                     /locus_tag="VE783_02125"
     CDS             complement(4069..4218)
                     /locus_tag="VE783_02125"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52218.1"
                     /translation="MIESYCLSCYKFVAASRSEFNLKLVELAHRARCKPADEKEFEGG
                     AALGH"
     gene            complement(4519..5001)
                     /locus_tag="VE783_02130"
     CDS             complement(4519..5001)
                     /locus_tag="VE783_02130"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52219.1"
                     /translation="MTANISQASIAPAADVLNSWKEIACYLNRGVRTVQRWEAELGMP
                     VRRPRNKSRSAVIAFRSDLDRWLRQNPAAEAGRELPVSSPGKEMVRRDDLIQAVHRCQ
                     SLCAEMQQTLTGFSNAVSEYRRTVQTLMISRGERPGWQPALQCNVDRPAQSELRRQAS
                     "
     gene            5335..7956
                     /locus_tag="VE783_02135"
     CDS             5335..7956
                     /locus_tag="VE783_02135"
                     /inference="COORDINATES: protein motif:HMM:NF013867.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0008984 - protein-glutamate methylesterase
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006935 - chemotaxis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein CheB"
                     /protein_id="HYX52220.1"
                     /translation="MPTLRPGKSRITKEASTNAVSQNSSSSQAPAQSFPIVGIGASAG
                     GLDAFTQLLNALPGNLGMGYVLIPHLDPSHESAMTELLRRHTRMPVLTVQSGMRVRPD
                     HVYIIPPNTEMTILDSVLRLSTRRAGEHAMPIDVFLRSLAEAHGPDAIAVILSGTASD
                     GTLGISAIKSEGGITFAQEPKTAKYDGMPVSAMATGCVDFVLPPAGIATELDKIRRHP
                     YLARRPEADIETLPPEQDDDLTQLFRILKQETKVDFSEYKPATINRRILRRMALKKFD
                     TVHEYTAYVREHRLEALALYQDILINVTSFFRNPEAFEALKKVVYPRLIKKRPPHDPI
                     RIWVPGCSTGEEAYSHAISLIEYLADERIELPLQVFGTDLNEAAVQKARAGVFKESIA
                     VDVSPTRLRRFFNKVEEGFQITKSVRDVCVFAPQNVFSDPPFSRMDLVSCRNLLIYLG
                     PSLQRRVIPIFHYALRPNGYLLVGNTEGIVGSGAELFDIADKKNRIYEKKAVPSRLFF
                     GFSMEQSDPAGVIMPPREPVESDPQRLPENLQKEADRLLLARYVPPAVVVNEQLDILQ
                     TRGHTGDYLELAPGRASLNLLRMARPGILSELQKAVQAARKAGAPITRERLQVEKNGA
                     VTLVNMEVVPFKVGPGAPATYLIVFNDADSTEKAEKAGRRLPEKEPHVDGDGGLQRQI
                     EQLTHELNATREYLQSIIEEREATNEELQSANEEIQSANEELQSTNEELQTSKEELES
                     ANEELNTVNDEMQHRNLQLTQLSNDLTNLLNSVNMPIVMLGPDLSVRRFTQQAEKILG
                     LGAVDVGRPIGNVKLKLDVPDLERRSLDVIQDAVPQQLTVKHGNSRYMLRITPYRTTG
                     HKVEGVVLTMPDPHDLK"
     gene            8160..8438
                     /locus_tag="VE783_02140"
     CDS             8160..8438
                     /locus_tag="VE783_02140"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52221.1"
                     /translation="MAKGQLPSHMGKGFLLTELRTGITFANVALTAPKYDPGKLSRNR
                     KNARKAYDTFCKFRDRVALSTSDLAELEEIATQLRSALQQLGENIIES"
BASE COUNT         1881 a         2894 c         2370 g         1908 t
ORIGIN      
        1 cccctcggaa tgggtctgga gaacagcccc gtgggctatg ctggaacacg atcctggccc
       61 cgcgctgttg cccactgagg gaatcgccgc aattccgttg cgtcctgcgg tgaaattttg
      121 cttctttcac ccgatcacca gggtcgaaaa tcttgaggcc atcacgagac ggccggttga
      181 atggtgggtg gctcgacccg atagccgagg ttgcgtaatt ccttgatcat cttcgtggtt
      241 cggattcgtc gggccttctg gctcaccgca ggaccacgct cctcgtagcg ggctctccgg
      301 tgcagaatga tccagatcag ccggcaaagg cgatgggcaa tcgctccgat ggtttgcttg
      361 tgcccgagac gcggcaccag acgtcgatag acattctcga agatactgcc tttaactttc
      421 accgcggcgt tggcagattg attgagaata cgtcgcatgt ggcggtttcc tttcggagaa
      481 cgatggcttt tcgacacccc gccgctctcc tgttctcctg ggcaagctcc aacccaggaa
      541 gccaggtgct tgggggaagg aaacgtgctg gctgtgacgc cgacttcggc aatgatctgc
      601 tgcgccgaat cgacccccaa gccgggcacc tccgccagtc gctttaccgc atcctgatgc
      661 ggccgcagca gactggccat ttcttgatcc agttgccgca cttgccgctc cagtaatcct
      721 agttccacca gtaacatcct cagcaaccgg cgatacacgg ggttgagttc ccggctcgct
      781 cccaaggcat cgcacaactg ctctggagtg gcgcgtaagc gctgatctgc cagagaggcc
      841 aacttcgtcg cgtccgtttc cccgtttgca atcgccttta acatgcggcg agcactgaca
      901 cccaaaagat cggaaactac gctagacaac ttcaggtgca tctcttccaa gagcgcctct
      961 agccggttct gcaactgcac tcggttcctc gtcgactggt gtttgcgccg catcaccgct
     1021 cgccaaagcc gttgttccgg atccggtact agactcaaca ccagttcatc ggacaccagc
     1081 cgtttcacca agcgctcggc gtcagcaaag tcctgtttgc gcccgcgccg tccgcgattg
     1141 gactccgctt gcgccaagtg caacgctccc gccatcggcc ctgcgttctc ccgttgctta
     1201 caatcgggtt gccaaaactg ttccagcgcg ccccatactg gtttccaata ttgcgccgtg
     1261 gattccatca ccacttcctc tgccctgtga tcgctcagcc acctgcacaa ggccaacagt
     1321 tgctctgggt tgctaccaaa ccggtaccgc tcaaactggt actcacccgc cacttcgata
     1381 tcggccatca ctaccgccaa catctttttg tgaacgtcga ttcccgctat cctataaggc
     1441 atcactgtcc tcctggcagg agcggagagc gtgccgcaaa ttccttaacc agggtcgcgg
     1501 gctatcgccg ctccttccca ggagagacaa cgcccattca ttcgctcaaa cgcacgctcc
     1561 ggatcagaca gatcagcggc atcaactact ccattgtgat tccgatctcg ccgttcctga
     1621 cctcttccag catgccctat aactaaaacc attttcatga gctttcgcgg gccgaaggcc
     1681 ctctccgaca gatcaccaga ttccccgcat gctaccgttg tcccgtgccc tcgcatcctc
     1741 tgcttctcgc cctcgtcgct ctcgtcgcct ccaccctcgc tgccgtcacc ggcttcggcg
     1801 gtgcagccgt cctgctcccg gcgctggtct ccgctttcgg cgtacgcgaa gccatcccga
     1861 ttctcaccgt cgcgcagctc atcggcaacg ccagccgcgt ctggttcaac cgccagtcgc
     1921 tcgactaccg cgtcgtcgcc tggttcgccc tcggcggcgt gcccacagcc ctgctcggcg
     1981 gatacctctt cgcccacgcc ccactcaccg cgctcacccg cgcactcggg atcttccttt
     2041 tgctcgtagt gctctggagg catctccacc cctcgccacc cggaaagttt cccgtgcagg
     2101 tcttcgccgg aatcggcgca ggcgccagct tcctctctgc gctgctgggc agcgtcggcc
     2161 ccctcatggc gcccttcttc ctcgcctacg gcctcatcaa atccgcttac atcggcacag
     2221 aagcactctc caccgtcgtc atgcacgtga ccaagctctt cgcctatcgc cagaccgccg
     2281 tgctcacaca cttcggcatg ctcgcaggcc ttgccctggg accgatcatg atcctcggtt
     2341 cattcctggg aaagaagatc gtggacaaac taccggagaa agttttcgtg cttctgatcg
     2401 aagctgtcct catcgccgcc ggcctgctgt ttttggtacg gggaaggtga gtctgggata
     2461 tttggtactt ggtacgtggt gtttgtactt aatgtttgaa tacttagtgt cgactaaacg
     2521 cgggtacttc tgtagcaaac aatccagaca ttcgcatatt ccaagctgtc accctgagcc
     2581 gcatcccgga caaactcgct gttattctcg gtgtgtagca caggcgccct cgcctgtgcc
     2641 gcaacaatgt caatctaccg ctgcaaattg ccgcactttg aaaaagacgg cgcttcgtgc
     2701 ttcatcatgt tccatacagg agatttcacg ctgaatgatg acacgaagct gttcctgatc
     2761 cgggacgatg agaccgatgc gccccagtgg gcatgaaatc atcatcaaga atcagtctat
     2821 agacctgagc acaaccgcaa gcacaacggc tcgagcacaa cgtcctgacc acctacgctg
     2881 ttaccgggac gcccggcttg ttgattgccc ggccagctct ctcttgccta ctgaatgtag
     2941 ctcttgttaa ctgtgtagca caggcccggg cccccaacaa acccgctgtt ggtttgttgg
     3001 ggtggaggcg cctcgcctgt gccgcgagaa tgacaatcta ccgacgcaaa ttgccgcacc
     3061 ttgaaagaga cggcggttcc tgcttcatca cattcaaggc aagagacgac ctgtccctga
     3121 atgatgacgc gaagtggctg gtgcttgatc attgtttgta cgacgacggc aagcgctacg
     3181 aactggagtc ggttgtggtg atgagcaccc atgttcatct gatactgact ccactgccgg
     3241 acgggctggg ttttccggtt ggcaacaatc atgaatgcca tcaagggagc atcatcacac
     3301 agcgtcaaca ggctcttgaa gagaagcggt tcgctctgga ttgacgagtc gtttgatcac
     3361 ctgatcagat cggaggagga ttttgaggac aagactctct acatcgccat gaatgcggtg
     3421 gaaaccgggg cacggactcc gcaggaatat ccctggtatt ggcgacgtgg aatgagaaag
     3481 cctaaacgga agcagaagat caaggacccg tggctcagtg gagagtaacc ggcacaggcg
     3541 cctgtgctac aagtcctgcc agccgaccgc gtcattatga gacagcttct agcagcctcc
     3601 aggcccacgg ccaaaggtcc ctctctccct cccgccttcg cagcccgctc gttcgcgcac
     3661 tcccctctga aggacccacc ccgaatcccg agtgcgaacg caggtgagtc gcgagtggtg
     3721 aggggcctgc cccgctgcag cctcgcgtga gccaacgaca atctgtgttg tgttcctgtc
     3781 ctgtgtgaag cgccgccaga ctgtaacaaa gacgctgtcc ctttgcgagg gcgcgcagtg
     3841 gcttccctgc tccagcgcga agcgcggaag agtgcgagcc cggcggcgta agccccggga
     3901 cgtcatcgta ataaattacg agcccgagcg gttccggcgc aaagcggcgg aatcgcgagt
     3961 ggcgaaacaa ccgacgtgcg cggcgccgcg ccaatgcatg cgcaaaaaag actgcgtctg
     4021 cacgagctgg aagctagcag ctagtagcta ccagctaaag gccaatggct aatggccaag
     4081 ggccgctccc ccctcaaact ctttctcgtc cgccggcttg caccttgccc gatgcgccag
     4141 ctccaccagc ttcagattga attctgagcg gctggccgcc acaaacttgt agcagctcag
     4201 gcagtacgac tcaatcactc tttgggtagg ttttcgcaaa tgccaaaagc ggggagatgc
     4261 cgttttcaag tggccctcct ctcttttgct ttcttcaggg cctcttctat ttgaagcaat
     4321 atctccggcg cggtattgct ggccgtctcg caaaattcag aatagctccc tcccggattg
     4381 ttactgagcg ggaaccggga agtcgcgcct gtctgctgct gaatccagat cttctcctct
     4441 taagctactg cgccatgggc tgctgctcca gcgccaacat ccgccgccgg cgcagggatg
     4501 accatatcta ggattttttt aagacgcctg gcgtctcagc tcgctttggg cgggacgatc
     4561 aacgttacac tgaagcgcag gctgccatcc gggtctttcc ccccgcgaaa tcatgagcgt
     4621 ctgcacggta cgccggtatt ccgataccgc gttggagaag cctgtaaggg tctgctgcat
     4681 ctctgcacac aggctctggc agcggtgtac tgcctgtatc aggtcgtcgc gcctgaccat
     4741 ttccttgccg gggctactga ccggcaattc cctccctgct tcagccgcag ggttctgcct
     4801 cagccatctg tccaggtcgg agcggaacgc aatcaccgcg ctgcggctct tgttccgggg
     4861 acgccgcacc ggcattccca gctctgcctc ccagcgctgg actgttctca caccccgatt
     4921 caggtagcag gcaatttctt tccaggagtt cagaacgtcc gcagcgggcg ctatcgaggc
     4981 ttgagagatg ttggctgtca taaatgtctc attcctcctc gagaaaaatc cgggaacaat
     5041 ggatggtgat ttcagtactc aacgttgcat ccgaattccc taagagtcca agcgaagtgt
     5101 atatcaagtt tactcccgtt ttgaagacct cccaccaagc ccactctgga attcgcaagt
     5161 acccggttca ggccttggga aaacgctctc ttccacctca cgcagtctcc ggctcgcaat
     5221 cgttgcgctg tcccgctctc aaaccctccg cgaggactat aattttcgtt gtctggtttg
     5281 ctctctcatt cctgttcgta gcttaggagg attacaccag cccattatcc tcacatgcca
     5341 accctgcgcc ccggaaagag ccgcataacg aaagaagctt ctacgaacgc tgtctctcag
     5401 aattcgtcgt caagtcaggc tcccgcccaa agctttccca tcgttggcat tggcgcctcc
     5461 gccggcgggc tggacgcttt cactcagctt ctgaatgccc tgcccggcaa tctgggaatg
     5521 ggctatgtgc tgattcccca cctggaccca agccatgaaa gcgccatgac cgaactgctg
     5581 cgccgccaca ccaggatgcc ggtgcttacg gtgcagagcg gcatgcgcgt ccgcccggac
     5641 catgtttaca tcatccctcc caacacggaa atgaccatcc ttgactccgt gctccgcctt
     5701 tccacccgca gggccggtga gcacgccatg cccatcgatg tttttctccg ctcgctggcg
     5761 gaagctcacg gccctgacgc gattgcagtg attctctccg gcaccgcttc tgacgggacc
     5821 ctgggcatta gcgccatcaa gagtgaaggc ggcatcacct ttgcccagga accgaagacg
     5881 gcaaagtatg acggcatgcc ggtcagcgcc atggccaccg gctgcgtgga ttttgttctg
     5941 cctccggccg gcatcgccac cgaactcgat aagattcgca ggcaccctta tctcgcccgc
     6001 cgacccgagg cagacatcga aacactcccg cccgaacagg atgacgatct tacccagctg
     6061 ttccgcatcc tcaagcagga aaccaaggtc gatttttccg aatacaagcc cgccaccatc
     6121 aaccggcgca tcctccgccg catggcgctt aaaaaatttg acaccgtgca cgaatacacg
     6181 gcctatgtgc gcgagcatcg actggaagcc ctcgccctgt atcaggacat tctgatcaac
     6241 gtaaccagct tcttccgcaa ccctgaggct tttgaagccc tgaagaaggt cgtatatccc
     6301 aggctcatca aaaaacgccc gccccacgat cccattcgca tctgggttcc gggctgctcc
     6361 accggtgagg aggcctattc ccatgccatc tccctgattg aatatctggc agatgagcgc
     6421 atcgaactgc cgctgcaggt cttcgggacc gatcttaatg aggctgcggt gcagaaggcc
     6481 cgcgccggcg tattcaagga aagcatcgcc gtggatgtct ctcccacccg cctgcgccgt
     6541 tttttcaaca aagtggaaga gggcttccag atcaccaagt ccgttcgcga cgtctgcgtc
     6601 tttgcccccc agaatgtttt cagtgatccg ccgttttccc gcatggacct ggtgagctgc
     6661 cgcaatctgc tgatctatct tggcccctcc ctgcaacgcc gcgtgattcc catttttcat
     6721 tacgctctgc gacccaacgg ttaccttctt gtcggcaata ccgaaggcat tgtcggcagc
     6781 ggggctgaat tgtttgatat cgccgataag aagaaccgga tttacgaaaa gaaagccgtt
     6841 ccctcccgtc tcttttttgg cttttccatg gagcagtctg atcccgccgg agtgattatg
     6901 ccgccacgag aacctgttga gagcgacccg caacgcctgc ccgaaaatct gcagaaagaa
     6961 gcggaccgcc tgctgctcgc gcgttatgtg cctcccgcag tcgtcgtcaa tgaacagctt
     7021 gatattcttc aaacccgcgg ccacaccgga gactaccttg aactggcgcc gggcagggcc
     7081 tctctcaacc tgttgcgcat ggcccgtccg ggaattcttt ccgaactgca gaaggcggtt
     7141 caggccgcgc gcaaagctgg cgcgcctatc acccgcgagc gccttcaggt ggaaaagaac
     7201 ggcgccgtga ccctggtcaa catggaagtg gtgccgttca aggtcgggcc cggcgctccc
     7261 gccacctatc tcatcgtctt caatgacgct gattcaacgg agaaggcgga gaaggccggc
     7321 aggcggctgc cggagaaaga gcctcacgtt gacggggatg gagggctgca gcgccagatt
     7381 gaacagctca cccacgagct caatgccacc agggaatacc tgcagtcgat catcgaagag
     7441 cgcgaagcca ccaacgagga acttcagtcc gccaacgaag aaattcagtc tgccaatgag
     7501 gaactccaga gcaccaatga agagctccag acttcgaaag aagagctgga atccgccaac
     7561 gaagaactga ataccgtcaa tgacgagatg cagcaccgca acctgcagct cacgcagttg
     7621 agcaatgacc tcaccaacct cctgaacagc gtaaacatgc cgatcgtcat gctcggccct
     7681 gacctgagtg tgcggcgctt cacccagcag gcggagaaga tccttggcct cggcgcggtg
     7741 gacgtcgggc ggcccatcgg caacgtgaaa cttaagctcg atgttcccga cctggaacgc
     7801 aggtctctcg atgtgatcca ggatgcggtc ccgcagcagc tcacggtgaa gcacggcaat
     7861 tcccggtaca tgctccgcat cactccctac cgcaccacag gccacaaggt tgagggtgtg
     7921 gtgctcacca tgcctgatcc acacgacttg aaataagcag ccacggttct ggcgcaggct
     7981 cacccgctgc gccttgctcg catcttaaac ggcggtgcgg caaggctgaa aagctgacgg
     8041 gcttcacttt agtaaacgct gtaaatcgca ctctgtagac aggatcagta aacgctgcga
     8101 gttgcgtacg agtgaacgct gttgaatcct gattagtaaa tgcttgttga ggtctcctca
     8161 tggcaaaagg acagcttcca tcccatatgg gcaaaggctt tctgctcacc gaactgagaa
     8221 ccggcatcac ctttgccaat gtcgcgctta ccgcgccgaa gtacgatccg ggaaagctca
     8281 gccgcaaccg caaaaatgcc cgcaaagcct atgacacctt ctgcaaattc cgcgaccgcg
     8341 tggccctgag caccagcgat ctcgccgagc tcgaggaaat cgccacccaa ctgcgcagcg
     8401 cattgcagca actgggcgaa aacatcattg agtcttagtc attcccaaat gcaatagtga
     8461 gcgggagggg tttcccggtg gagcaggcaa cacgaatttc atcggaatta gcacgctcca
     8521 ggccaaaaac cgttgcgacc gcgctgctca atcctgcttc catgctccga gcgccgcagg
     8581 cgcgacgtta gcgtagcccc cggcgaagcg tagcggaacc gggggtacgg tcacaaaaaa
     8641 atccgagcgc cgtaggtgcg acaccgacaa attgaatgcg gcgtcaagat tcaaaaaacc
     8701 acgtcacggc aacctcagcc gacgctctcc ccctgttgtc atcctgagcg aaacgcgagt
     8761 cgagcttgcg agatgagcgt ggagtcgaag gataccgagg atgcgtcctc tgccatgtag
     8821 cttcagggag ttctcgcgac aacttccggc ggcgttttcg tcttcgccga tgaagacttt
     8881 ctcccgctga aggacccacc ccgaatcccc gacgctcggg agcgtaagcg accgaaggag
     8941 cgggtgatgg gcctgctccg ctgcagtttc gcgtaagccg acgatgactg cgtatccccc
     9001 acgactgcgt aaacgggaga atatacgcac tcccactatg aaggacccac tcc
//
LOCUS       DASQYP010000067         5235 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_2088, whole genome shotgun sequence.
ACCESSION   DASQYP010000067 DASQYP010000000
VERSION     DASQYP010000067.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 5235)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5235)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5235
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2088"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            625..1368
                     /locus_tag="VE783_02145"
     CDS             625..1368
                     /locus_tag="VE783_02145"
                     /inference="COORDINATES: protein motif:HMM:NF013307.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52222.1"
                     /translation="MASVVSPVARGVPPIRAGQGHSFFWRRLHSLSGIVPVGAFLVEH
                     FISNAFATNGPWAYRDQVKFLSGLPFVPILEIFGIYLPIAYHAFYGFYIWFRGQSNVS
                     DYPWAGNFMYASQRWTGAIAFFYMGWHTYTMRFSGIHLLTNNGAAFAKVQMELQNPWA
                     GAFYTIGIIAASWHFAYGLYLFCAKWGITVSDRSRKAFGAVCFVIAITFIAVGMATLS
                     AFFRPQWKNTPADLPEKPPAVQGEASAGH"
     gene            1466..3262
                     /gene="sdhA"
                     /locus_tag="VE783_02150"
     CDS             1466..3262
                     /gene="sdhA"
                     /locus_tag="VE783_02150"
                     /inference="COORDINATES: protein motif:HMM:NF006392.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase flavoprotein subunit"
                     /protein_id="HYX52223.1"
                     /translation="MAASRNPKIIVIGGGLAGLSAVIKIAEAGGNVDLFSIVPVKRSH
                     SVCAQGGINAAKNLKGEGDTTWQHFDDTIYGGDFLANQPPVKAMCEAAPGIIDLLDRM
                     GVPFNRTPEGLLDFRRFGGTLYHRTAFAGATTGQQLLYALDEQVRRYESEGRVTKFEH
                     WEFLSAVLDNDKVCRGICAMDLRSMEVRTFPADAIIMATGGIGAIFGKSTNSVVCTGS
                     AQSALYQQGCFYANGEFIQVHPTSIPGEDKLRLMSESARGEGGRVWVPKNKGDKRDWK
                     SIPANERFYFLEEWYPKYGNLVPRDVATRAIHKIVYEHGLGIDGQPMVYLDLTHIDRA
                     TLDRKLEGILEIYEKFVGDDPRDVPMKIFPGMHYTMGGLWVDYNQATNIKGIYACGEC
                     DYSIHGANRLGANSLVSCIYGGFVAGPNAVQYAKNLLKSADGVASTVYDAERKRQEDA
                     NASLISASGTENPFRIWRELGELMTKNCTVIRYNNNLKETDAKLVELLERFNKINMGD
                     KSMWANTSFVFARQLYNMLQLSRVIAQGAAMRDESRGAHYKPDFPDRDDKNWLKTTKA
                     YFAPDVDEPRFEFEPVDISLIQPRPRRYDMAT"
     gene            3359..3559
                     /locus_tag="VE783_02155"
     CDS             3359..3559
                     /locus_tag="VE783_02155"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52224.1"
                     /translation="MEQRQHSNASPQWYRNTAIVFFVIGLALTGAWLKKHDWVYGAFA
                     GITFLNAIMTTLKFITVRGTAQ"
     gene            3559..4305
                     /gene="sdhB"
                     /locus_tag="VE783_02160"
     CDS             3559..4305
                     /gene="sdhB"
                     /locus_tag="VE783_02160"
                     /inference="COORDINATES: protein motif:HMM:NF006391.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase iron-sulfur subunit"
                     /protein_id="HYX52225.1"
                     /translation="MAKTVILKIKRQDSPKAAARWEEFELAWKPGMNVISAMMEIAAN
                     PVTRDGKTTTAIAYDSNCLEEVCGSCAMRINGRARMACSALVDKLEQPITIEPFSKFP
                     VIRDLQVDRSVLFENLKAVKAWVPVDGTYDLGSGPRMAPVEQEERYPISRCISCCCCM
                     EACPQFNDATGFVGAATIAQVKLFNEHPTGSALKQERLRALMGDGGIQECGYAQNCVE
                     VCPKDIPLTKAIADTGREVIKQAFKDFFRG"
     gene            4672..>5235
                     /locus_tag="VE783_02165"
     CDS             4672..>5235
                     /locus_tag="VE783_02165"
                     /inference="COORDINATES: protein motif:HMM:NF039204.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5715 family protein"
                     /protein_id="HYX52226.1"
                     /translation="MAVAATVLPAFAASPANVVRRDTRYRHRRAHVRHVVWNPVLKGS
                     PDSQLRQNEEIDRLQLPRIADDEQLMELERTQELVPIEETRALKVSASIKPEKRYARP
                     WVTLFLADMSQAYYKEFHQPMQVNSAVRTIEQQHKLRRSNRNAAPETGDNGSSHLAGI
                     TVDLAKRGLTRTQHAWIEEYLKNMRDQN"
BASE COUNT         1170 a         1425 c         1574 g         1066 t
ORIGIN      
        1 ttggcgacgt gggatgagaa agcttaaacc gaaacagaag attaaacctc cggagctcaa
       61 tggagagtaa cccggcacag gcgagggcgc ctgtgctaca aagcctgcta tcgatcgact
      121 aatttttgag acagcttcta gtaattttgg caccgtggaa ggtggtggca atctccgaga
      181 tcgccggaat cggaaagaca aaaccaaaac cgtcttaccg cagtcgtcca tgggatttca
      241 tcgcacacag gagcatgaaa aatcggtgtg atctaggctc acgcgagacg gcagcggagc
      301 aggccccctc gtcgtgctca cctcgcaagc tcggctacgc actccgtcgg ggtgggtcct
      361 tcatggggag agagtctgga acgcaaacga cgcgcacgga tgagggtggc tctttcaggg
      421 cagaggacac ggagggcgca gagaattacg gacggagcag gttggcataa atcaggacgg
      481 catcgggaga gggttgatga cggccatcac agaagtttgc gcgcggggtc ggccatagta
      541 attgactgtc cccggaatcg ggcttgataa taaaaggttt gcctcagcag tttattcacg
      601 caaggaaaac ggagagaagt ccgaatggct agcgttgttt ctcccgtggc gcgcggcgta
      661 ccccccatcc gcgcaggtca gggccactca ttcttctggc gcaggctgca ttcattgagc
      721 gggattgtcc cggtaggggc gttcctggtg gagcatttca tctccaatgc ctttgccacc
      781 aacggcccgt gggcgtatcg cgaccaggtc aagttcctga gcgggctgcc ctttgtgccc
      841 atactggaga tcttcggcat ttacctgccg attgcgtatc acgcgtttta cggcttttac
      901 atctggttcc ggggccaatc caatgtgagc gattatccct gggccggaaa ctttatgtac
      961 gcctcgcagc ggtggacggg ggcgatcgcc ttcttctata tgggctggca tacgtacacg
     1021 atgcggttca gcgggataca tctgctcacc aacaacggcg cggcgttcgc caaggtgcag
     1081 atggaactgc agaacccgtg ggcgggcgcg ttttacacga tcggaatcat cgcggcgtcg
     1141 tggcactttg cttatggcct ttatctgttc tgcgcgaagt ggggaatcac ggtgagcgac
     1201 cggtcgcgca aggcttttgg cgcggtctgc ttcgtaattg ccatcacgtt tattgccgtg
     1261 ggaatggcta cgctatcagc tttcttccgg ccgcagtgga agaacacgcc agccgacctg
     1321 ccggagaagc ctccggcggt gcagggcgag gccagcgccg ggcactagtc attgatcgag
     1381 agtcactgat ccaagcggct ataaccaagc ggcggtaaat cggcagagtt cggaaaattt
     1441 ctgggagaca aaaggtcttc aaaatatggc agcaagcagg aatcccaaga tcattgtgat
     1501 cggcggcggg ctggcgggcc tttccgcggt aatcaagatt gctgaagccg gcgggaacgt
     1561 tgacctgttc tcgattgttc cggtgaagcg ctcgcactcg gtgtgcgccc agggcggcat
     1621 taacgcagcc aagaacctga agggtgaggg tgacaccacg tggcagcatt ttgacgacac
     1681 catttatggc ggtgacttcc tggccaacca gcctcctgta aaggcgatgt gcgaggctgc
     1741 gccgggaatc atcgacttgc tagatcgcat gggcgtgccg ttcaatcgca cgccggaagg
     1801 cctgctcgat ttccgccgtt ttggcggcac gctctaccat cggacggcgt ttgcaggcgc
     1861 tactaccggc cagcagcttc tttatgcgct cgatgagcag gttcgccgct atgagtccga
     1921 gggccgggtg accaagttcg agcactggga gttcctgagc gccgtactcg acaacgataa
     1981 ggtctgccgt ggcatttgcg cgatggacct gcgcagcatg gaggtccgca cctttcctgc
     2041 cgacgccatc ataatggcca cgggcggcat tggtgcgatc ttcggcaaat cgaccaactc
     2101 ggtggtttgc accggctcgg cgcagtcggc gttgtaccag cagggctgct tctacgcgaa
     2161 tggcgagttc atccaggtgc atccgacgtc gattcctggc gaggacaagc tgcggttgat
     2221 gtcggagtcg gcgcgcggtg aaggcgggcg cgtgtgggtg ccgaagaaca agggcgataa
     2281 acgcgactgg aagagcattc ccgcgaacga gcgcttctac tttctggaag agtggtatcc
     2341 caagtacggc aacctggtgc cccgtgacgt ggccacgcgc gcgatccaca agatcgtata
     2401 tgagcacggg ctcggcatcg atggacagcc gatggtttac ctcgatctca cgcacattga
     2461 ccgcgccacg ctggatcgga agctggaagg cattctggaa atttacgaaa agtttgtggg
     2521 cgacgatcct cgagacgtgc cgatgaagat tttccccggc atgcattaca ccatgggcgg
     2581 gctctgggtg gattacaacc aggcgacgaa tatcaaggga atctacgcct gcggcgaatg
     2641 cgactacagc atccacggcg ccaaccggct gggagcgaac tcgctggtct catgcattta
     2701 cggcggcttt gtggcgggcc cgaatgccgt gcagtacgcc aagaacctgc tcaagtcggc
     2761 tgatggcgtg gccagcacgg tttacgatgc cgagcgcaaa cggcaggaag acgccaacgc
     2821 cagtttgatt tcggccagcg gcacggaaaa tccgttccgc atatggcgcg aactgggcga
     2881 actgatgacc aagaactgca ccgtcatccg ctataacaac aatttgaaag agactgacgc
     2941 gaaactggtg gaattgctgg agcggttcaa caagatcaac atgggagaca agagcatgtg
     3001 ggccaacact tcgttcgtgt ttgcccgcca gctttacaac atgctgcagc tctcgcgggt
     3061 gattgcgcag ggagccgcca tgcgggacga gtcacgcgga gcgcactaca agcctgactt
     3121 cccggatcgc gatgacaaga actggctgaa gacaaccaag gcctactttg ctccggacgt
     3181 ggacgagccc aggtttgagt ttgagccggt ggatatttcg ctcattcagc cgcggccaag
     3241 acgttatgac atggcgacct aacggaatga accacagagg tcacagaggc acacaggggt
     3301 tccgttcggt tagggacatc cctctgtgct cctccgcgtc gtcagtggta aaggtcttat
     3361 ggaacaacgg cagcacagca atgcttctcc gcagtggtat cgcaatacgg cgattgtctt
     3421 cttcgtaatc gggcttgcgc taaccggcgc ctggctcaag aagcatgact gggtctacgg
     3481 cgcatttgcc ggaattacat tcttaaacgc gattatgact acgttgaaat tcatcacggt
     3541 acgggggacc gcacaataat ggccaagacc gttattctga agatcaagcg gcaggacagc
     3601 ccgaaagccg cggcgcgctg ggaggagttt gagctggcct ggaagccggg aatgaacgta
     3661 atttccgcca tgatggagat tgccgccaac cccgtaaccc gcgacggcaa gacgaccact
     3721 gccatcgcct acgattccaa ctgcctggag gaagtctgcg gctcctgcgc catgcgcatc
     3781 aatggtcgcg cccgcatggc ctgctccgca ctggtcgaca agttggaaca gccgatcacg
     3841 attgagccct tcagcaaatt ccccgtcatc cgcgatcttc aggtggaccg cagcgttctc
     3901 ttcgaaaact tgaaagccgt gaaagcatgg gtgcccgtag atggcactta cgatctgggt
     3961 tcggggccgc gcatggcgcc cgtggagcag gaagagcgtt accccatctc ccgctgcatt
     4021 tcctgctgct gctgcatgga ggcgtgtccg caattcaatg acgccaccgg gttcgttggg
     4081 gctgcgacaa tcgcgcaggt aaagcttttc aacgaacatc cgaccggctc tgcgctgaag
     4141 caggagcggc tgcgcgccct gatgggcgat ggcggaatcc aggaatgcgg ctacgcccag
     4201 aactgcgtgg aagtctgccc caaggacatc ccgctgacca aggcaattgc cgacactggt
     4261 cgcgaggtga tcaaacaggc gttcaaagat ttctttcgcg gataatcagg cttgatctca
     4321 aagtgagacg cgaaatcggg cttattcgca aaaactgttg ctacgggatt tattaaaatt
     4381 tttcttgatt gccgctgatt tgctaatcta tgaaaaagat taatggcgtg acaaaaattg
     4441 tcattctgct gcctaagctg ctgattacta aagtctcaga agatttggtg accaactgga
     4501 ccccagaaat ttggccaatt caggggaacg tctgagccgg gttacggcag ctctggttta
     4561 aactttgtca tctaagcaga ggctttcaaa acaggaaggc ttcaaaacac gaaggctcta
     4621 aatcacgaac caatgggcgc caaaagaata ctaacttcgt cgattctatt gttggcggtt
     4681 gcagccaccg tgctgcccgc gtttgcggct tccccggcca atgtggtgcg ccgggacacc
     4741 cgctatcgcc atcgccgggc ccacgttcgc cacgtggttt ggaatccggt gctgaagggt
     4801 tctcctgact cacagctgcg ccagaacgaa gaaatcgatc gcctgcagct tccacgcatt
     4861 gctgatgatg agcagctgat ggagcttgag cgcacccagg aactggtgcc gatcgaggag
     4921 actcgcgcgc tcaaggtaag cgcctccatt aagcctgaga aacgctatgc gcgcccgtgg
     4981 gtcacgctgt tcctggcgga catgagccag gcgtattaca aggaatttca tcagccgatg
     5041 caggtgaact cggcagtgcg gacgattgag cagcaacaca agctgcggcg tagcaatcgc
     5101 aacgcggcgc cagagaccgg cgacaacggc tcctcacacc tggcgggcat tacggtagac
     5161 ctggccaagc gtggccttac acgcacgcag cacgcatgga ttgaggagta cctcaagaac
     5221 atgcgtgacc agaac
//
LOCUS       DASQYP010000068         7672 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_235322, whole genome shotgun sequence.
ACCESSION   DASQYP010000068 DASQYP010000000
VERSION     DASQYP010000068.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 7672)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7672)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7672
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_235322"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..237
                     /locus_tag="VE783_02170"
     CDS             <1..237
                     /locus_tag="VE783_02170"
                     /inference="COORDINATES: protein motif:HMM:NF013237.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0019346 - transsulfuration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PLP-dependent transferase"
                     /protein_id="HYX52227.1"
                     /translation="GSLRNAKKMLARVRTCTLGESLGGVETLISHPASMTHAALGEAG
                     RKKIGLTDGMVRISVGIEDAQDILADLDQALAAI"
     gene            complement(253..570)
                     /gene="cutA"
                     /locus_tag="VE783_02175"
     CDS             complement(253..570)
                     /gene="cutA"
                     /locus_tag="VE783_02175"
                     /inference="COORDINATES: protein motif:HMM:NF015077.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0010038 - response to metal ion [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="divalent-cation tolerance protein CutA"
                     /protein_id="HYX52228.1"
                     /translation="MTNARIVMTTAGAPEEAKRIAHALVERRLAACVNIIPHIESVYR
                     WQGKIEHASEWLLVIKTQAEAFDRLRDALKDLHSYEVPECVMLSIADGSQPYLDWIEE
                     NTA"
     gene            692..970
                     /locus_tag="VE783_02180"
     CDS             692..970
                     /locus_tag="VE783_02180"
                     /inference="COORDINATES: protein motif:HMM:NF014877.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52229.1"
                     /translation="MATQIKFGTSGWRAIIADEFTVANVRRAITGIARYVVSKKASGA
                     RVVVGRDPRYMGERFVEIASEVLSFTACSPWSSQNPLQRPRFPGKRCV"
     gene            961..2091
                     /locus_tag="VE783_02185"
     CDS             961..2091
                     /locus_tag="VE783_02185"
                     /inference="COORDINATES: protein motif:HMM:NF014879.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52230.1"
                     /translation="MRLKADGAINFTASHNPPEYNGIKFSTPDGAPALPEVTKAIESL
                     VPQNGDYPGGAAAKVAPEKIDPKPAYLAKLRESIDLELIRKSGLKVVFDPLWGAARGY
                     TDELLRSAGIPVTTVHDVRDVLFGGHAPEPDGELLDEMRQQMKATGSRIGIATDGDAD
                     RFGIVDTDGAFIQPNYVLALCFDYLVESRGWKNGVAKSVATTNLVNALAEHHKVELHE
                     TPVGFKYIGELIKQDKLAIGGEESAGLTMRYHVPEKDGLLAGLLCCEAMARRNKSLQQ
                     QIQDVFAKVGSFYPQRENFRLTPEVKQKFTEKLTSDPADFSGRKVKQVVRTDGMKLIF
                     ADGSWVCYRLSGTEPVVRVYSEARSADDLTRLANAAKDWIFN"
     gene            2124..2480
                     /locus_tag="VE783_02190"
     CDS             2124..2480
                     /locus_tag="VE783_02190"
                     /inference="COORDINATES: protein motif:HMM:NF016839.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="septum formation initiator family protein"
                     /protein_id="HYX52231.1"
                     /translation="MKNQKMRKYFEAFAEHALGARHKLATAAILALMCVVGYHVIFGA
                     NGLLAYEAKRRESQDLQRQLESLEQQNVGLQDRIKALKSDPKAIEKEAREHLRYVRPG
                     EVVYTLPAARSAKPAR"
     gene            2662..3030
                     /locus_tag="VE783_02195"
     CDS             2662..3030
                     /locus_tag="VE783_02195"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52232.1"
                     /translation="MKKIAFTLLAIACLATLSLAKDEGKDKGKKETVSGWVSDAKCGA
                     KGANADHAACAKKCADAGEKLVVVKDGDNSIVNVSNQDALKGHEGHHVKVTGTESADG
                     MHVDKVAMLKDKGKSDKKGM"
     gene            complement(3124..3921)
                     /locus_tag="VE783_02200"
     CDS             complement(3124..3921)
                     /locus_tag="VE783_02200"
                     /EC_number="2.8.1.10"
                     /inference="COORDINATES: protein motif:HMM:NF017501.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:1990107 - thiazole synthase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiazole synthase"
                     /protein_id="HYX52233.1"
                     /translation="MQPFVYNKAMDPFLIAGRQFKSRLIVGTGKYKSGQETARAIEAS
                     GAEMVTVAVRRVELDRSKESLLDFINPEKYFLLPNTAGCYTAEEAIRTARLGREVGLS
                     DWVKIEVIGDQKTLYPDVQATIEATRVLVKEGFTVLPYTSDDIVVAKRLVDAGASAIM
                     PLGAPIGSGMGIQNAANIQILREMITDVPLIVDAGVGTASDAALAMELGADAVLMNSG
                     IAHAEDPILMAEAMKHGVIAGRDAYLAGRMPKKLYATASSPVAGVVR"
     gene            3963..4370
                     /locus_tag="VE783_02205"
     CDS             3963..4370
                     /locus_tag="VE783_02205"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52234.1"
                     /translation="MRGFQAFGVFLFFGSSMATLAAVTLLLPGTFLDRAWALNPVGHQ
                     QLSLVGRSAGLFFGLLASVLATAGIGWFRRRLWAWWIAAIVISLQVAGNIGGIIAGQA
                     LRGIFGVTVALLLLIYLLRTKTQAFAPAQTSPR"
     gene            4378..5079
                     /locus_tag="VE783_02210"
     CDS             4378..5079
                     /locus_tag="VE783_02210"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter ATP-binding protein"
                     /protein_id="HYX52235.1"
                     /translation="MSSPPGSIGSEYILTAEHLTRTVGDRSIVNDISIQVRAGEILGI
                     VGPSGSGKSSFLRLLNRLDEPTSGTVFLRGVDYRQIAPRELRRQVGMVTQRPFLFPGT
                     IAENLGFGPRQRGETLSRQECQQLLSRVGLNGYADRDVANLSGGEAQRVSIARALANS
                     PAVLLLDEPTSALDEDAKAGVEALLREIIRDHNLTCVIVTHDMAQAARIAERVLLVEG
                     GKVRKIGTVQEVLRA"
     gene            5072..5878
                     /locus_tag="VE783_02215"
     CDS             5072..5878
                     /locus_tag="VE783_02215"
                     /inference="COORDINATES: protein motif:HMM:NF015605.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HYX52236.1"
                     /translation="MLKHFFSNQLALGLAQAAAAALAAFIVVLLARRRHIHLEGEAAI
                     AMMRGLVQIVAVGSVLVLLLRGPRWTSGFVLAAMIVAAGATSARRAKGIPGAFRVSAC
                     AIACGAGSVIALMTGLGVIDSAITALVPVGSMLIANAMNTNGLALNRFRADVLAHVGE
                     VETALALGAGPRESVAPYVQSSFEASLIPAVDSLRSLGIVWIPGLMAGMLLSGANPTY
                     AAIYQFVTLAMIFAASGLTSLISTMLVRLQAFTAAEQLLLRPVEAGTKKR"
     gene            complement(5905..6837)
                     /locus_tag="VE783_02220"
     CDS             complement(5905..6837)
                     /locus_tag="VE783_02220"
                     /inference="COORDINATES: protein motif:HMM:NF013324.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SPFH domain-containing protein"
                     /protein_id="HYX52237.1"
                     /translation="MSVLISLVVTFVLSFVLVPIFLGFLRMMGVYTVVEEGHCHVYVL
                     FGKVAAIINEPGLHILLFKLGPKAPIVRWLGKLYVLDMRIDQQYLRSQPVNSEEGAPM
                     GIGIWYEMFVSDPVAFLFKNADPRGSLAANVSNSTVRCLSNMKLADMLQSRHAMSQTV
                     RTEVSPQSHEWGYKLGSVYIRKVHFRDTQMIEQIQEKVVNRLRQVTSSIKQEGANQVS
                     IITSTAERQAAAEFAKAAAMRPQIVGDALNQVAADPDVEAAMFEILEIQKIVESKARI
                     TLIPGNAGLLPELLATVARGPEPPAPPRQKAAGA"
     gene            complement(6834..>7672)
                     /locus_tag="VE783_02225"
     CDS             complement(6834..>7672)
                     /locus_tag="VE783_02225"
                     /inference="COORDINATES: protein motif:HMM:NF013324.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="SPFH domain-containing protein"
                     /protein_id="HYX52238.1"
                     /translation="DADEKQRYNYPQVRVIMPGGPYFKLPWQRVYKVSVATQTVNMAY
                     DPESSSANQGGTVLEAVTKDQLNTGLTGQIRYRISERNLYAYLFGVKYPIAHVMGYFV
                     SVLRERIATFEAPPAAEAAAASGTATTTAAPSLGAGSGISINDLRKNLRDLNEHMDRE
                     CASSEARYGIVLDASLITGIDPPPEVESALAAINTAHNMVSSDISLAQAAADQRIEQS
                     KRAAEIETLKAQAEVQPLTALADQLAALKRNGPNALGAYVRNVRLGLFAQAQQVVMES
                     KR"
BASE COUNT         1541 a         2272 c         2235 g         1624 t
ORIGIN      
        1 ggctcgctgc gcaacgccaa gaagatgctg gccagggtgc ggacctgcac gctgggcgaa
       61 tctctgggtg gcgtggagac cttgatctcg catcccgcga gcatgacgca cgccgcgctg
      121 ggcgaggcgg gaagaaagaa gatcggacta acggatggga tggtgcgcat ctcggttggc
      181 atcgaagacg cgcaggacat ccttgctgat ttggaccagg cactggccgc gatttaagct
      241 gctatgcggg cgctacgcgg tgttttcctc gatccagtcg agatacggct ggctgccgtc
      301 ggcgatggag agcatcacgc actccgggac ttcgtaggag tgcaggtctt tgagcgcgtc
      361 gcgcagccga tcgaaggctt ccgcctgcgt cttgatgacg agcagccatt cgctggcgtg
      421 ttcaattttg ccctgccagc gatagacgga ctcaatgtgc ggaatgatat ttacgcacgc
      481 agccagacgg cgttccacca gtgcatgggc gatgcgcttt gcttcctcgg gcgcgcccgc
      541 cgtggtcatt acgattcgag cgttggtcat tcggaagtcc cccgccggga agtgtaacag
      601 cggatgcgcg ggtgggaagc aaaatcgagc gggttcaaag gtgaaccaac aaaaccaaag
      661 cggccgccgc agcaactaag gaaagtgcag catggcaacg cagattaagt tcgggacgtc
      721 aggatggcgg gcgattatcg ccgacgagtt caccgtggcc aacgtgcggc gcgcgatcac
      781 cggaatcgcc cgctacgtgg tgagcaaaaa ggcgagcggc gcccgcgtgg ttgtcgggcg
      841 cgatccgcgc tacatgggcg agcgcttcgt tgagattgcc tcagaggtcc tgagcttcac
      901 ggcgtgcagc ccctggtcat cgcagaaccc gctccaacgc ccgcgatttc ctgggaaacg
      961 atgcgtctga aagccgatgg cgcgatcaac ttcaccgcgt cgcacaatcc gccggagtac
     1021 aacggcatca agttctccac gccggacggc gcgcccgcgc tgccggaagt cacgaaggcc
     1081 attgagtcac tggtgccgca gaacggagat tatcccggcg gcgcggcggc gaaagttgcg
     1141 ccggagaaaa ttgatcccaa gccggcctat ctggcaaagc tgcgcgagag catcgacctt
     1201 gaactcattc gcaagtcagg cctcaaagtt gtctttgatc cgctttgggg cgcggcccgc
     1261 ggctacactg acgaacttct gcgcagcgcc ggcattcccg tgaccaccgt tcatgacgtc
     1321 cgcgacgttc tcttcggcgg ccatgctcct gagcccgatg gcgaacttct ggacgagatg
     1381 cgccagcaga tgaaagccac gggctcgcga atcggcatcg cgaccgatgg agatgcagat
     1441 cgcttcggga tcgtcgacac agatggcgcg ttcatccagc caaactacgt gctggctctc
     1501 tgcttcgact acctggtcga gagccgcggc tggaagaacg gcgtggccaa atccgtcgcc
     1561 accacaaatc tggtgaacgc gttggcggaa catcacaaag tcgagctgca tgagacgcca
     1621 gtggggttca agtacatcgg cgagctgatc aagcaggata agctcgcgat cggaggggaa
     1681 gagagcgcag gactcaccat gcgctatcac gtcccggaaa aagatgggct gcttgccgga
     1741 ttgctgtgct gcgaggccat ggcgcgtcgc aacaaatcat tgcagcagca aatccaggat
     1801 gtttttgcca aagttggttc tttttatccg cagcgcgaaa acttccgctt gacgcctgag
     1861 gtgaaacaga agtttactga gaagttaacc agtgatccgg cggatttttc cggtcgcaag
     1921 gtgaagcagg tggtgcgcac ggacggaatg aagctgatct tcgctgacgg ctcttgggtc
     1981 tgctaccggt tgtcggggac cgagccggtg gtcagggttt attcggaagc gcggtcggca
     2041 gatgatctga ccagactggc caatgccgca aaagattgga tttttaatta gctgttgtga
     2101 ttccagattt gaagaatgca ggtttgaaga atcagaagat gaggaagtac tttgaggcct
     2161 ttgctgagca cgcgctcggc gccagacaca agctggcgac ggccgccatc ctcgcgctga
     2221 tgtgcgtggt ggggtatcac gtgatatttg gagcaaatgg cctgctcgcc tatgaggcta
     2281 agcggcgtga gtcgcaggac ctgcagcgcc aactcgagtc gctggagcag caaaatgtgg
     2341 gactgcagga ccgcatcaag gccttgaagt ctgatccgaa agctattgaa aaagaagcac
     2401 gtgagcacct gaggtatgtt cgtccgggtg aggtggttta caccttgccc gcagcccgtt
     2461 ccgccaaacc tgcccggtga ccagcgggta tccccgcttg ctctaagtaa gtttcccgct
     2521 tgccagttta gcggccttca tttagaaatc ttgtgctgta actcccaagc cattgggaac
     2581 tccataagta ccggcaataa aggggagttt cggcggcacg ccgccggagc cgtacatcta
     2641 ccagaggaga aaaacagttt catgaagaag atcgctttta cactgctcgc aatcgcctgc
     2701 ctggccactc tgtcactggc caaggatgag ggaaaagaca aaggcaaaaa agaaaccgtc
     2761 agtggctggg taagtgacgc aaagtgcggc gccaaaggcg ccaatgctga ccatgccgcc
     2821 tgcgccaaaa agtgcgccga tgccggcgaa aagctggttg tcgtgaaaga tggcgataac
     2881 agcatcgtta atgtctccaa ccaggatgcg ctaaagggcc atgaaggcca tcatgtgaaa
     2941 gtcaccggca ctgagagtgc tgatggcatg catgtggata aagtcgccat gctgaaggac
     3001 aaaggcaagt ccgacaagaa gggcatgtaa ttctgttcgc agaaaagttc aaaggcggcc
     3061 tgattggccg ccttctttat tgtgggcaat gtttggacct cgcgcagcaa atcacatcgc
     3121 cggttagcgc actactcctg ccacagggga acttgctgtt gcgtacagct tcttcggcat
     3181 tctgccggca agatacgcat cccggcccgc gataacaccg tgcttcatcg cttccgccat
     3241 caaaatcggg tcttccgcgt gggcgatccc agagttcatc agcactgcgt cggcgccaag
     3301 ttccatcgct agcgctgcgt ctgaagctgt ccccaccccc gcatcaacaa tcagaggtac
     3361 atcggtgatc atctcgcgca aaatctgaat attcgccgcg ttctggattc ccattccgct
     3421 cccaatgggt gctccgagcg gcataattgc gcttgcgccg gcatcaacta atcgcttcgc
     3481 aaccacaatg tcatcagagg tatagggcag aaccgtaaac ccttccttca ccagcacgcg
     3541 agtcgcttct atcgtcgcct gaacgtcggg ataaagggtc ttctggtccc caatcacctc
     3601 aatcttgacc caatcgctca gccctacctc gcggcccagt cgtgccgttc ggatagcttc
     3661 ctctgcggtg tagcaacccg cagtgtttgg caagagaaag tatttttccg gattgataaa
     3721 atcgagcagc gactctttac tacggtccag ctctacgcga cgtaccgcca cggtcaccat
     3781 ctccgccccg ctggcctcaa tagctcgggc ggtctcctgt cctgacttgt acttacctgt
     3841 gccaacaata aggcgggatt tgaactggcg gccggcaatc agaaaaggat ccatggcttt
     3901 attgtaaaca aaaggctgca ttcgtcggct atcctcaacc ggcggcgtat agtggttttc
     3961 cgatgcgtgg ctttcaggca ttcggcgtat ttctgttctt tgggtcttcc atggcgactc
     4021 tggccgcagt cacgcttctc cttcccggaa cattcctcga ccgagcctgg gctctcaatc
     4081 cagttggtca ccagcagctt tccctcgtcg gccgctcggc ggggcttttc tttggactac
     4141 tcgcatccgt actcgccacc gccggtatcg gctggttccg ccggcgtctc tgggcctggt
     4201 ggatcgccgc aattgttatc tcgcttcagg tcgcgggaaa catcggtggc atcatcgcag
     4261 gtcaggctct gcgcggcatc ttcggcgtga ctgtcgcttt gttgctgctg atctatctcc
     4321 tgcgtactaa aactcaagca tttgctccgg cgcaaacctc accccgataa tgattccgtg
     4381 agctcacccc caggttcaat tggctcagag tacattctca ccgctgagca tctgacccgc
     4441 acagtcggcg accgctcaat cgtcaatgac atctcgatcc aagtgcgcgc tggcgagatc
     4501 ctgggaatcg tcggccccag cggctccggc aaaagctcct tcctgcgact ccttaaccgc
     4561 ctcgatgagc ccacctccgg caccgtcttt ctgcgcggtg tagattatcg ccagatcgcg
     4621 ccgcgcgagc tgcgccgcca ggtcgggatg gtcacgcaaa gaccgtttct atttccggga
     4681 accatcgctg aaaatctggg tttcggcccc cggcagcgcg gcgagacact ctctcggcaa
     4741 gaatgccagc aacttctgtc ccgcgtgggc ctcaacgggt atgcggaccg tgatgtcgcg
     4801 aacctttccg gcggggaggc gcagcgtgtc tccatagcgc gtgcgctggc caactcgccc
     4861 gcggtactgc tgcttgatga accaacttcg gctctcgatg aagatgccaa ggcgggagtc
     4921 gaagccctgc tgcgcgaaat catccgcgat cataacctca cctgcgtgat cgtgacgcat
     4981 gatatggccc aggcagcgcg aattgctgag cgcgtcttgc ttgttgaggg aggtaaagtt
     5041 cgcaaaatcg gcacggtcca ggaggttctg cgtgcttaag cactttttca gcaaccagct
     5101 cgcgctggga cttgcgcagg ctgccgccgc cgcactcgcc gcgttcatcg ttgtgctgct
     5161 cgcgcgccgc aggcatattc acctggaagg tgaggccgcc atcgccatga tgcgcggact
     5221 ggtacaaatc gtggctgtag gatcggtgct ggtgctgttg cttcgggggc cgcgctggac
     5281 gagtggtttc gtccttgccg ctatgatcgt tgctgcgggc gcaacctcgg ctcgccgcgc
     5341 caaaggcatt cccggtgctt tccgcgtctc tgcttgtgcc atagcgtgcg gcgccggatc
     5401 ggtaattgct ttgatgaccg ggctcggcgt gattgattca gccatcaccg cgctcgttcc
     5461 cgtcggcagt atgctgatcg cgaatgccat gaacaccaac ggcctggcgc tgaatcgctt
     5521 tcgtgccgac gtgcttgccc atgtgggcga agtcgaaact gctctcgcac tcggtgcggg
     5581 acctcgcgag agcgttgcgc cttacgtgca atcctccttc gaggcaagcc tgatcccagc
     5641 ggtcgattcg ttgcgctcgc tcggcatcgt ctggattccc ggtctcatgg cgggcatgtt
     5701 gctttccgga gccaatccca cctatgccgc catctaccag ttcgtcacgc tggccatgat
     5761 cttcgccgcc tcgggtctca cctcgctgat ttctaccatg ctcgtgcggc ttcaggcgtt
     5821 caccgcggct gagcagcttt tgttgcgtcc cgtggaagct ggcacgaaga aacgctgata
     5881 tcctgcagct gatcagcgcg ctcgctacgc gcccgcagcc ttctgtcgcg gcggtgctgg
     5941 aggttcaggg ccacgcgcca ccgtcgccag tagctctggt aaaaggcccg catttccagg
     6001 aatcagcgtg atccgcgcct tactttccac gatcttctga atttccagaa tctcgaacat
     6061 ggctgcttcc acgtcaggat ccgctgccac ttgattcagc gcatcaccca caatttgcgg
     6121 acgcatggcc gcagctttgg caaactctgc cgcagcctgg cgttcggcgg tgctcgtaat
     6181 aatgcttacc tggttggctc cctcctgctt gatggacgac gttacctgcc gcagccggtt
     6241 caccactttc tcctggatct gttcgatcat ctgggtgtcg cggaagtgca ctttgcggat
     6301 gtagaccgat cccagcttgt aaccccactc atgcgactgt ggcgagacct ccgtccgtac
     6361 cgtctggctc atggcgtggc ggctctgcag catgtccgcc agcttcatgt tgctcaggca
     6421 gcgcacagtg gagttgctca cgttcgccgc cagtgaaccg cgcgggtcag cgttcttgaa
     6481 cagaaaagcc accggatcgc tgacaaacat ttcgtaccag atgccgattc ccatcggagc
     6541 accctcttct gagttcaccg gctggctgcg caggtattgc tggtcaatgc gcatatccag
     6601 aacgtagagt ttcccgagcc agcgcacgat cggcgccttg ggaccaagct tgaacagcag
     6661 gatgtggagg ccgggctcgt tgataatcgc cgccaccttg ccgaacagca catatacgtg
     6721 acagtggcct tcttccacca ccgtgtaaac gcccatcatg cggaggaagc ccagaaaaat
     6781 cggcaccaga acgaaactca aaacaaaagt gactacaagg gaaatgagga cgctcatcgt
     6841 tttgactcca tcacaacctg ctgggcctgg gcgaacaggc caaggcgaac attgcgcaca
     6901 taggccccca gtgcattcgg cccgttgcgc ttcaacgcgg caagctggtc agccagagcc
     6961 gttaaaggct gcacttcagc ctgcgccttt agggtttcaa tttccgcggc gcgcttggat
     7021 tgttcaatcc gctggtcggc tgccgcctgg gccagactga tgtcggagga gaccatattg
     7081 tgtgcggtat tgatggccgc cagcgcagac tccacttccg gtggcgggtc gatgccggtg
     7141 atcagcgagg cgtccagcac aattccataa cgcgcctcag acgacgcgca ctcgcggtcc
     7201 atgtgctcgt tcaggtcgcg caggttcttg cgcagatcgt tgatggagat gccgctcccg
     7261 gctccaagag aaggggcggc tgtggttgta gcagttccgg aagctgcagc ggcttcagcg
     7321 gccggcggcg cctcaaacgt ggcaatccgc tcgcgcagca cggagacgaa atagcccatc
     7381 acatgggcga tcggatactt cacgccaaac aggtacgcat aaaggttgcg ttcagagatg
     7441 cgataccgaa tctgccctgt aagcccggtg tttaactggt ccttggtcac cgcctcaagc
     7501 accgtgccac cctggttggc gctgctggat tcagggtcgt aggccatgtt caccgtctgc
     7561 gtggcgacgc tcaccttgta aacccgctgc cagggcagct tgaagtaagg accaccaggc
     7621 atgatcaccc gcacctgcgg atagttgtag cgttgtttct catcggcatc ca
//
LOCUS       DASQYP010000069         6209 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_215890, whole genome shotgun sequence.
ACCESSION   DASQYP010000069 DASQYP010000000
VERSION     DASQYP010000069.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 6209)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6209)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6209
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_215890"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1859
                     /locus_tag="VE783_02230"
     CDS             <1..1859
                     /locus_tag="VE783_02230"
                     /inference="COORDINATES: protein motif:HMM:NF019156.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52239.1"
                     /translation="PAAIWYARERKGLHVMTVNDYLARRDAQWMGGIYEFFGLSVGYI
                     QREMTTVERQKAYSCDVTYATANEVGFDLLRDQLALFPEEQVHRPFNAALIDEADSIL
                     IDEARIPLVIAGGDAGVDSLPLRVDALVRRFRGGVHFTLDEHGRNVALTDAGAHEAER
                     FFHSGNLYLERNLNLLCAIQDSIHAHALLHRDVDYLVKDGAIQSVDEFKGRIIQDRRW
                     PAGLHTALEAKEHVGFKEQGQVLGSITLQNLVGLYPQICGMTGTAATQRDEFRKIYEL
                     GVEVIPTNKPVIREDHPDVIFRTKAEKHEALLEEIFETHASGQPVLVGTTSVEESEQL
                     SRKLKEAGVPHHVLNARNEEEEAGIVARAGERDAITISTNMAGRGTDIRLGEGVAALG
                     GLYVIGTNKHESRRIDNQLRGRAGRQGDPGSSRFFVSLQDDLILKYAAGDPIVGQDPD
                     AIQHIVEGQNLAIREFLNKYESVIEGQRQFIQSRRQAILTGEEESATETERLIKLTTI
                     DDLWADFLAEVADYRAGIHFVSWANRDPLHEYLITIDRMFQDLQQKIEEEIADRLQQA
                     ETGSAPSSRQRGATWTYLTTDQPFGTATERILKCFGNFLLGHLPSSGRLPSE"
     gene            2010..2231
                     /locus_tag="VE783_02235"
     CDS             2010..2231
                     /locus_tag="VE783_02235"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52240.1"
                     /translation="MSTAAVLEPKAVEQAVKPQLTVVETEAAVKTEMHPLLVVGIAIV
                     IALFGALTFVGSIIVWLNIRHSGVAHPLF"
     gene            complement(2228..2992)
                     /locus_tag="VE783_02240"
     CDS             complement(2228..2992)
                     /locus_tag="VE783_02240"
                     /inference="COORDINATES: protein motif:HMM:NF012596.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase"
                     /protein_id="HYX52241.1"
                     /translation="MTDQVQVQVENRVMAIRMNRPEKKNALTGAMYNAMRDALRKAGG
                     NPQVRAVLLTGTQDCFTAGNDLADFAAAKPGEPVPALTFLEVLTATPKPVVAAVAGVA
                     VGIGTTMLLHCDLVYAAKSARFQLPFVNLGLCPEAASSMILPAMAGSHRASELLMLGE
                     PFGADVGREIGLVNQVVDDAELFAAAAAKAQALAEKPPAAMRATKALIKGSVSAAIAE
                     AMKRESAQFGALLQGPEAKEAMAAFMERRKPDWSKF"
     gene            3450..4136
                     /locus_tag="VE783_02245"
     CDS             3450..4136
                     /locus_tag="VE783_02245"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52242.1"
                     /translation="MKPLLAATFAVLFSCTLAAQRRQQAQSAPAPARQDLTSMLLDLD
                     RAAAATAADISHLHIEKWKGGWKSGFTVSSAHKQRAEQSAASLQRNLQGALPDLIRDA
                     LASRNISSTFKVYEDLGLVCETLDGLVSTAEQFGKNEEYAHLAGDFTSLTRLRRSFSA
                     VIKAQSAANDGGSVGTPYFPPSGSGMSVTGGDGEAPRRIVVDDTVPEKKPASATPEKK
                     KSTIQYTNYQ"
     gene            complement(4431..4823)
                     /locus_tag="VE783_02250"
     CDS             complement(4431..4823)
                     /locus_tag="VE783_02250"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52243.1"
                     /translation="MVSKRILSVSYEVSLLATRHMLLKQQDHEVTSALGFTEAIAMCE
                     RAGFDLFILGHSIPMNDKLALIGRFKEHCPAPILSLDRAGEPAVDADYHATPDNPERL
                     LQVVSSILEDAPPAGAASKGEEVPRRPP"
     gene            complement(4845..5174)
                     /locus_tag="VE783_02255"
     CDS             complement(4845..5174)
                     /locus_tag="VE783_02255"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52244.1"
                     /translation="MAAICLTLYGAISHLDTLSVDSQYCVAEHLRNMRKKIAKRPQED
                     PDLWVSPNLALRGPNGDRGFHLGGNLPPENGARFLELADIALGLKRPADKPRSRKSVQ
                     HDSPTKR"
     gene            complement(5264..>6209)
                     /locus_tag="VE783_02260"
     CDS             complement(5264..>6209)
                     /locus_tag="VE783_02260"
                     /inference="COORDINATES: protein motif:HMM:NF012382.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HYX52245.1"
                     /translation="GLREAIAEMQSVSVEEVQVVTGASEALTVLMWLAAERGANVILP
                     QPGYPAFSALPESLGMEARFYRMTGEKSFAIDIEEIKRLVDNRTRLIVINSPHNPTGA
                     TISDADMESLHEFTSSRGIQLVSDEVYHPIYHGVETRSAARLPHATVIHDFSKAFSVP
                     GVRTGWMIEHDAERRRQYWNARAFFTICNSTSGEILAEIAMRNRRAVLGRTQRVAKQN
                     LELLDRFMAHHRETLGWVQPQGGMTAFPWLLEEADARPFCELAARRGVLLAPGDCFDM
                     PAYFRLGFAASGTGFAEALDRMGELVRSREKRNERITA"
BASE COUNT         1203 a         2057 c         1669 g         1280 t
ORIGIN      
        1 tccccgccgc gatctggtat gcgcgcgagc gcaaaggtct gcacgtgatg accgtgaacg
       61 actacctcgc ccgtcgcgat gcgcagtgga tgggcggcat ctacgagttc ttcggcctca
      121 gcgtcggcta cattcagcgc gagatgacca ccgtcgaacg gcagaaggcc tactcctgcg
      181 acgtgaccta cgccaccgcg aacgaagtcg gctttgacct gcttcgcgac cagctcgctc
      241 tctttcctga agagcaggtc catcggcctt ttaacgcggc gctgatcgac gaagccgatt
      301 ccatcctgat tgacgaagct cgcatccccc tggtgatcgc aggcggcgac gctggcgtcg
      361 attcccttcc cttgcgcgtc gacgctctgg tccgccgctt ccgcggtggc gttcacttca
      421 ccctcgacga gcacggacga aacgtcgcac tcactgacgc gggcgcgcac gaggcggagc
      481 gtttcttcca ctccggcaat ctctacctcg aaagaaacct gaatctgctc tgcgccattc
      541 aggattccat ccacgcgcat gcgctgctgc atcgcgacgt ggattatttg gtcaaagatg
      601 gcgccatcca gtctgtcgac gagttcaagg gccgcatcat ccaggaccgc cgctggcccg
      661 ccgggctgca caccgcgctt gaggccaagg agcacgtggg ctttaaagag caaggtcagg
      721 tgctgggctc catcacgctg caaaatctcg tcgggcttta tccgcaaatc tgcggcatga
      781 ccggcacggc cgccacgcaa cgcgacgagt tccgcaagat ctacgaactt ggagtcgaag
      841 taatccccac caacaagccg gtgatccgcg aagatcatcc tgacgtgatc ttccgcacga
      901 aagcggaaaa gcacgaagcg ctgctggaag agatttttga aacgcatgct tccggccagc
      961 ctgttctggt gggcaccacc agcgttgaag aatctgagca actgagccgc aaactgaaag
     1021 aagcaggcgt gccgcatcat gtgctcaatg cgcgcaatga agaggaagaa gcgggcatcg
     1081 tcgcccgcgc gggcgaacgc gacgccatta ccatctccac caacatggcc ggccgcggca
     1141 cagacattcg tcttggcgaa ggcgtggccg cgctcggcgg actgtacgtg atcggcacca
     1201 acaaacacga aagccgccgc atcgataacc agcttcgcgg acgcgccggt cgccagggtg
     1261 atcccggcag ctcgcgtttt tttgtctcgc ttcaagacga cctcatcctt aaatatgccg
     1321 ccggtgatcc catcgtcggc caggatcccg acgccatcca gcacatcgtg gaaggccaga
     1381 acctggccat ccgcgagttc ctcaacaagt acgaatcggt gatcgagggc cagcgccaat
     1441 tcatccagag ccgtcgccag gccatcctca ccggtgaaga ggagtccgcc actgaaaccg
     1501 agcggctcat caagctcacc accattgacg atctctgggc agactttctt gctgaagtcg
     1561 ccgactaccg cgccggcatc cacttcgtct cctgggccaa ccgcgatcct ctgcacgaat
     1621 acctcatcac catcgaccgc atgttccagg atctgcagca gaagatcgaa gaagagatcg
     1681 ccgaccgcct gcaacaagcg gaaaccggca gcgctccttc ttcccgacag cgcggcgcca
     1741 cctggaccta cctcaccacc gaccagcctt tcggcaccgc gaccgaacgg atcctgaagt
     1801 gcttcggcaa tttcttactg gggcaccttc ccagcagcgg tagactcccg tccgaataaa
     1861 ccgcggcgtc ggctcgcgtg gaaccgcgca cctcgcctct tcgcctctcc actgtcaccg
     1921 cgcacatgtg acggccatca catacccgcg gtgatcgtcc gccgtaatct gcgctcatcg
     1981 caagtccgta catcggagga gaactttcca tgagcacagc agccgtactt gaacccaaag
     2041 ccgtagaaca ggccgtaaaa ccccaattga ccgtggttga gacggaagcc gccgtcaaaa
     2101 ccgaaatgca tcccctgctg gtggtcggca tcgccatcgt gatcgccctg tttggcgcac
     2161 ttacgttcgt aggctcgatc attgtttggc tcaacattcg gcactccggc gtggcgcacc
     2221 cactgttcta gaactttgac cagtccggct tgcgacgttc catgaacgcc gccatcgcct
     2281 cttttgcttc cggcccctga agcaacgcgc cgaactgcgc tgactcgcgc ttcatcgcct
     2341 cggcaattgc cgcgctcacg ctgcctttga tcagcgcctt agtcgcgcgc atcgccgctg
     2401 gaggcttttc cgccagcgcc tgcgccttcg ccgcagccgc cgcaaaaagc tcagcgtcat
     2461 cgaccacctg attcaccagt ccgatctccc gtcccacgtc ggcgccaaac ggctcgccca
     2521 gcatcagcaa ttccgacgcc cgatggctcc ctgccatcgc cggcagaatc atgcttgacg
     2581 ccgcttccgg gcacagcccc agattcacaa acggcagctg aaacctcgcc gacttcgcgg
     2641 cataaacaag gtcgcaatgc agcagcatcg tcgtgccaat ccccactgcc actcccgcca
     2701 ccgcagccac aaccggcttg ggcgtggccg tgagcacctc aagaaacgtg agcgcaggca
     2761 ccggctcgcc gggtttggcg gcagcaaagt ctgccagatc gttgccggcg gtaaagcaat
     2821 cctgcgtgcc ggtaagcagc acggcgcgca cctgcggatt gccgcccgcc ttacgcaacg
     2881 catccctcat cgcgttgtac atcgcgccgg tcagcgcgtt cttcttctcc ggacgattca
     2941 tccgaatcgc catcacccgg ttttcgactt gtacctgtac ctggtccgtc atcagcttct
     3001 cctccgtcgc atgtcaaacc cgaaagtata gccctccaaa ttcaccgcaa tggacgccaa
     3061 ggacgcaaag gagcacaagt tgatctgtgc tcatctgcgc tatctgcgtt gaacgcggtt
     3121 gttttcatct cgttttttcc ttatcagtgt catcagtgca atcagtggtc tgattttttt
     3181 tccgcttctc tctgagtggc gccctttgcg gtgaaagggt ttgtgtgtac cccaatctcc
     3241 tgattagtgc tttttcgcct tcattcgccg caaaatcttg cttgttgcgc gtttccgatt
     3301 ccggcgattc cgggcgattc cgcacgatta cggcgatctc tggcctatcc ccatccgtca
     3361 cgggacttac tttaggcccg gtcctgtccc ccggtaactg cctcatggtc ttctatttag
     3421 ctatgcttac cgggacgagg agtttcgcaa tgaaaccact tctggctgca acatttgctg
     3481 tactgttttc ctgcacactc gccgcgcaac gccggcagca ggcgcagtcc gctcccgcgc
     3541 cggcccgtca ggacctcact tccatgttgc tcgatcttga ccgcgccgcc gccgccaccg
     3601 ccgcggacat cagccatctg cacattgaaa agtggaaggg cggctggaaa tccggcttca
     3661 ccgtcagcag cgcgcacaag cagcgcgcgg agcaatccgc cgcctcgctg cagcgcaatc
     3721 ttcagggcgc cctgcctgac ttgatccgcg acgcgctggc ctcgcgcaac atctccagca
     3781 cttttaaagt ttatgaagac ctcggcctgg tctgcgagac gcttgacggg ctagtctcca
     3841 ccgccgaaca gttcggcaag aatgaagaat acgcgcacct ggcgggcgac ttcaccagcc
     3901 tcacgcggct gcgccgctcg ttttcggcgg tcatcaaggc gcagagcgca gccaatgacg
     3961 gcggcagcgt gggcaccccg tactttccgc ccagcggaag cggcatgagc gtgaccggtg
     4021 gcgatggcga agccccgcgc cgcatcgttg tggatgacac cgtgccggaa aagaagccgg
     4081 cttccgccac gcctgagaaa aagaaatcca ccatccagta cacgaattac cagtagcttc
     4141 tttccgttaa ttaccttggc ggcgcgtgtg taagcacgcg ccttttttgt tctcctggcg
     4201 ccaatcggaa ttctgtcctt gcatctccaa ctttcctggc cagatcggtt tcagttacct
     4261 gccctcgcgt tccgccccaa ctcacaccgg catctaacgt tgtaccggca gccttccggg
     4321 attctgcgca gacatgtcct tcatgcgctc tcactcccgc actcacccgg acctgctgat
     4381 ttcctactgc ctgcgctgcg gagacttcat tgcagcgccg cctcacgctt ttacggtggc
     4441 cggcgtggca cttcttcgcc cttgctcgca gcccccgcag gtggcgcgtc ttccagtatg
     4501 ctgctgacca cctgaaggag acgctcaggg ttgtcaggcg tggcgtgata gtcggcgtcc
     4561 acggccggct cacctgcgcg gtccagtgaa agaatgggag ccgggcagtg ttccttgaac
     4621 cgcccgatca gcgcgagctt gtcattcatt gggatggaat ggccgagtat gaacaagtca
     4681 aacccggcgc gctcgcacat ggcgatggct tccgtaaaac ccagtgcgga ggtaacctca
     4741 tggtcctgct gcttcagcag catgtgtcgt gtcgccagca ggctgacctc ataagagacg
     4801 gacaggatgc gttttgacac catcagaatc cactcaaaaa ataatcagcg ttttgtagga
     4861 gaatcgtgct gaacagattt ccgggacctc ggcttatccg ccggtctttt cagtcccagc
     4921 gcaatgtcgg cgagctccag gaagcgcgcc ccattctcgg gcggcaggtt tcctcccaag
     4981 tggaaaccgc gatcaccatt tggcccgcgc agggccagat tcggtgagac ccacagatcc
     5041 gggtcttcct gcggtctttt cgcaatcttc ttgcgcatgt tcctcaggtg ttcagcaacg
     5101 cagtattggc tatccacgct caaagtgtca agatggctga tagcgccata aagcgtcaag
     5161 cagatggctg ccatgatctg ctctttgcgt ttccaaaggg tgttatgtgt gatccattgg
     5221 tcatttaact cttccgggga ctaccccgcc cagaaacccc gaactatgcc gtaatccttt
     5281 cattcctctt ctcacggctt cgtaccagtt ctcccatgcg atccaacgcc tccgcgaagc
     5341 cggttccgct ggccgcaaag ccgagccgga aataagccgg catgtcaaag cagtctccgg
     5401 gcgccagcag cactccccgc cgggcggcga gttcgcagaa cggcctggcg tcagcttctt
     5461 caagcagcca tgggaacgcg gtcatgcctc cttgcggttg cacccagccc agcgtctcgc
     5521 ggtggtgtgc catgaagcgg tccagcagtt ccagattctg cttggccacc cgctgcgtcc
     5581 ggccgagaac tgcccttcgg ttgcgcatgg caatctcggc cagtatctct ccggacgtgc
     5641 tgttgcagat ggtaaagaat gcccgcgcat tccagtattg cctgcgccgt tcggcgtcat
     5701 gctctatcat ccagccggtg cgaacgccgg gcacggaaaa ggcctttgaa aaatcgtgga
     5761 tcacggttgc gtgcggcagc cgtgcagcgg acctggtttc aacgccatgg tagatcgggt
     5821 gatagacctc gtcgctcacc agttgaatgc cgcgtgagga tgtaaattcg tgcaggctct
     5881 ccatgtcggc atcgctgatt gtggcgccgg tgggattgtg cgggctgttg atcacgatca
     5941 gccgggtgcg attgtccact aggcgcttaa tctcttcaat gtcgatggcg aagctcttct
     6001 cacccgtcat tcggtagaag cgcgcctcca ttcccagcga ttccggcaac gccgagaacg
     6061 cgggatatcc aggctgcggc aggatcacgt tggctccgcg ttcggctgcc agccacatca
     6121 ggaccgtcag ggcctcagac gcgcctgtga ccacctgcac ctcttccacg ctaaccgact
     6181 gcatttcggc aatcgcttcc ctcaggcca
//
LOCUS       DASQYP010000070         6916 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_215977, whole genome shotgun sequence.
ACCESSION   DASQYP010000070 DASQYP010000000
VERSION     DASQYP010000070.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 6916)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6916)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6916
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_215977"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..513
                     /locus_tag="VE783_02265"
     CDS             <1..513
                     /locus_tag="VE783_02265"
                     /inference="COORDINATES: protein motif:HMM:NF012955.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HYX52246.1"
                     /translation="RLNAKGSREDAQAELAPGELCAALPAGFDTRNYSTRPFTITHWV
                     HNGDKIDLGGRRLTIVATPGHTPDAISLLDEANGLLFTGDTYYPGTVWLYRSETDLDA
                     YEKSLEKMIALAPQLKLLLPAHNVPVADPSELPKLLAAFRQVRAGRAAVEQSGEKKVY
                     TADGFSFLMK"
     gene            complement(559..2574)
                     /locus_tag="VE783_02270"
     CDS             complement(559..2574)
                     /locus_tag="VE783_02270"
                     /inference="COORDINATES: protein motif:HMM:NF024816.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HYX52247.1"
                     /translation="MWKKVSQFLLVVLFSLSCFGQRISHQNAGTPYFVAADKQLAANP
                     GADVIALIRQGWAATQQAGAADQDYATGVESTTRMLSVLNRDLEADGIVKQALAACNT
                     PALALVRAQVLIRHSENLLRRRDLVLAGNFMKESVAREEASGTDPQILLAMKMLLASI
                     EEQRGNTNEAEQILKATLDQGKPSVQAGRRQEFIFQQRLPYFGEPYPMLAALYSRHER
                     TAEAEQIYRDRAASTQADPQEHVLAIRQLAQVLASHGQLEEAMKLQEEILQQEAAQGQ
                     PANTAGDEATLASYQIRAGQKEEGMRLLHSELDRAAAVKGTSSYEYQSALNNLIQNAI
                     EAGELDLAEKMARDALERAQASTGNDTGPVITSMNYLAQVLRAKGDTKTANELNQQIT
                     EMGLRNVSGRAGELQRAFAEVPKLNNEGKTADAMAAVETIASTYYPFQTDELWQFIQS
                     AYSFLNTPQHKAEATRVAEVVMSLVERENLGTDPRSASLLAQWANVYGGFLGDSATAE
                     KLLQRAEDLIRECCGEQSPRMDAVLRDRVSLTKERQDRITALEKLRDFEVQVFGVNGQ
                     DAENTNVMLAQSYMSSGKWEMAQQAYAAALAASSTRDGKKTSHYVNLMGRVAMEFLNY
                     GRYQAALEMNQQALTLSEGVLYADRIRPNLERVQQQILERMAQPVRK"
     gene            2757..3014
                     /locus_tag="VE783_02275"
     CDS             2757..3014
                     /locus_tag="VE783_02275"
                     /inference="COORDINATES: protein motif:HMM:TIGR03898.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mersacidin/lichenicidin family type 2
                     lantibiotic"
                     /protein_id="HYX52248.1"
                     /translation="MEILTTPQSNLDVIRSWKDPKYRRSLTAQQLQAIPEHPAGSFMI
                     TEQEMKVASGLMMEDEDFSIPLTTALGCTDYTFHSWKSCGC"
     gene            3360..6371
                     /locus_tag="VE783_02280"
     CDS             3360..6371
                     /locus_tag="VE783_02280"
                     /inference="COORDINATES: protein motif:HMM:TIGR03897.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 2 lanthipeptide synthetase LanM family
                     protein"
                     /protein_id="HYX52249.1"
                     /translation="MTQVLGTSPESLNFEPPAWLHLLARAYSSPAAEADRPNWGPVAS
                     HPEAGFLRLVDPLLSQAHRELQRRAQEIKHRYPDAPFDSSSATQILYANLPPRLLMII
                     AKTMVLELHVARLQGTLQGSTPAERFLSFTDRLARPAVAENLLSDYPVMARRLALSVE
                     NWKNVSAEFLEHLAIDWPEITRLFNLNAECGLLTLAAAGAGDTHRHGRSVVIAQFASG
                     FQLVYKPRSTAVDQHFQQFLEWTNSKGASPPLRTLKVLDRTSRGWVEFAHTSRCQSDE
                     DVIRFYERQGEYLAILYILQATDFHFENLLACGEHPVLVDLEALLHPWLRQIEIQQPD
                     ARMVVLAKSRSVLRTGLLPRRTGKHADYAGIDLSGLGGAAGQITDNILQWVAEGTDEM
                     AAVRQPFRMPGARNRPTVEGADIDVRYYVESIVTGFARMYELLRAHRDELLSEAGPLN
                     HFARDEVRVVARATRGYGVLLSQSLHPDYLRDSVELELLLDRLWVGVEENSHLLALIN
                     FEHRDLMQGDIPIFTTQPASSDLLSSRGEKLHAYLTKSGLELAREVVEGLADADLRRQ
                     IWFIRASLATLDLAGDDLTRGRYEPVTPSRLLSQEELSPRLIEQARIIGDRLEQLALQ
                     EPSDATWIGFAYVNKIWSLDALLEDLYTGSSGIIFVLAYIGSFGYPNFTELARSGLNT
                     LRSRMEQRTKVLRSIGAFDGWGGIIYLLAHLGALWHDDDLIAWAETIVARLPEFISED
                     KALDVIGGSAGCIGALLALNEVAPSPKTLAVAVQCGDRLLAKVQVVPGGVGWFNNIET
                     EKPITGFAHGAAGIAWALLELASATGKDRYRETALQALTYEHTQYSSATGNWVDNAGE
                     KPTTGPSMAWCYGAPGIGLARVGALRHTSGDSCVQEDLDRAVKVTLSSGFGANHSLCH
                     GDLGNLEFLLQAVQLTRSAELAAKVNELANQILASVEKHGPLCGVPLAVESPALMNGL
                     AGICYGLLRLAAPERVPSVLTLEPPVRNSRG"
     gene            6465..>6916
                     /locus_tag="VE783_02285"
     CDS             6465..>6916
                     /locus_tag="VE783_02285"
                     /inference="COORDINATES: protein motif:HMM:NF026220.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52250.1"
                     /translation="MKLAFAFLLLATATAQDWKPLPVNTTASLRGLSVVNEQIVWASG
                     TGGTVLRTIDSGKTWSVLTVTGAESLDLRGIRAFNANNAVVISSGPAEKGQARIYRTT
                     NGGKSWNKVFEQTIAGIFFDAVAFWDQKHGIVLSDPVAGKFALFTTDDG"
BASE COUNT         1363 a         2144 c         1832 g         1577 t
ORIGIN      
        1 cgcctgaacg ccaaaggctc acgtgaagat gcccaggcgg aactcgctcc cggcgaactc
       61 tgtgcggcac tgcctgccgg attcgacaca aggaactact ctacgcggcc tttcaccata
      121 actcactggg tgcacaacgg cgacaagatc gatctgggcg gacgccggct gaccatcgtc
      181 gctacccccg gccacacgcc cgacgctatc tcgcttctcg acgaagccaa tggcctgctc
      241 ttcaccggtg acacctacta cccgggcacc gtctggcttt accgttcgga aactgacctg
      301 gatgcctatg agaaatcgct ggagaagatg atcgcgcttg cgccccagct caagttgctc
      361 ctgccggccc acaacgttcc ggttgccgac ccgagcgagt tgcccaaact gttggctgcc
      421 ttccgccagg ttcgcgccgg aagagcagca gtggagcaaa gtggtgagaa gaaggtatat
      481 acggctgatg gcttttcgtt cttgatgaaa taagactgcg gaagagagca gaagcaatct
      541 gtgatggcag gaagcccgtc attttcgaac tggttgcgcc atcctctcca gaatctgctg
      601 ttgcactcgc tccaggttgg gcctgattcg gtcagcgtac aggacgcctt cggagagtgt
      661 tagcgcctgt tgattcatct ccaacgccgc ctgatatctc ccataattta gaaattccat
      721 cgccactctg cccatcaggt tcacataatg tgaggttttc ttcccatctc tcgtgctgga
      781 agctgccaag gcggctgcat acgcctgttg cgccatctcc catttgcccg acgacatata
      841 gctctgggcc agcatcacgt tcgtgttctc ggcgtcctgg ccgtttactc caaatacctg
      901 cacctcaaaa tcgcgtagct tctccagggc agtgatcctg tcttgccgtt ctttggtcag
      961 ggaaacgcgg tcgcgcagaa ccgcgtccat cctgggcgac tgttcaccac agcattcccg
     1021 gatgaggtcc tcagctcttt gaagaagctt ctcagcagtt gcgctgtctc ccagaaagcc
     1081 gccataaaca tttgcccact gtgctaacaa agaggccgat cgtggatctg tccccaggtt
     1141 ttcgcgttcc accagtgaca tcaccacttc agccactcgg gtcgcttctg ccttgtgttg
     1201 tggggtgttt agaaacgagt atgccgactg gataaactgc cagagctcat cggtctggaa
     1261 ggggtaatac gtggatgcga tagtctccac ggccgccatc gcgtccgcag ttttcccctc
     1321 attgtttaat ttgggcactt ctgcgaaagc tctttgcaac tcgccagcac ggccgctcac
     1381 gttcctcagt cccatttccg ttatctgttg gttcagttca ttggccgttt tggtgtctcc
     1441 cttcgctcgc agcacctgtg ccaggtaatt catggaagtg ataaccggcc ctgtatcgtt
     1501 gcctgtgctt gcctgcgcgc gttccagggc atcccgtgcc atcttctccg ccaggtcaag
     1561 ttccccggct tcaatcgcat tttgaatcag gttgttgagg gcggactggt attcgtagct
     1621 gcttgtcccc ttcacggccg ctgcgcggtc gagctccgag tgaagcaggc gcatgccctc
     1681 ttctttctgt cctgcacgga tctggtagct tgcaagggtg gcttcatcgc ctgccgtgtt
     1741 ggctggctgt ccttgggcgg cctcctgttg caaaatttct tcttgcaact tcatcgcctc
     1801 ttccagctgg ccgtgactgg ccagaacctg agccaattgt cgaatggcga gaacatgctc
     1861 ctgtggatcc gcctgcgtac tagctgcacg atcgcgataa atctgctctg cctcagcggt
     1921 gcgctcatgg cgcgagtaca gcgctgcaag catcggataa ggctctccga agtacggcag
     1981 cctttgctgg aagatgaatt cctgccttct ccctgcttgc acactgggtt ttccctggtc
     2041 cagagttgct ttcaggattt gttcagcctc gttggtatta cctcgctgct cttcaatgga
     2101 ggccagcaac attttcattg caagcaggat ctgtggatcc gtgccggacg cctcttcccg
     2161 cgccacgctc tccttcatga aattgccggc cagtacgaga tctctgcgcc gcaatagatt
     2221 ttcggagtgt ctgatcaata cttgcgccct gaccagcgcg agcgctggag tgttacacgc
     2281 ggccagagcc tgtttcacaa tgccgtcggc ttccaggtca cgattcagga ctgacagcat
     2341 gcgtgttgtg gactcaacac cggtcgcata atcctggtca gcagcgcccg cctgctgcgt
     2401 cgctgcccag ccctggcgta tcaatgcgat cacgtccgca ccggggttcg ctgccagctg
     2461 tttatccgcc gccacaaagt agggcgttcc agcattttgg tgggaaattc gctgcccgaa
     2521 gcagctcaag ctgaacagta ctaccaaaag gaactgcgag actttcttcc acatatggtc
     2581 tgcctttcaa aatcgcccag agaacctgac tatgaacgat tcaggccagc tttgttgcgt
     2641 tgccggcctg cagttccaaa atggaactgc tctccttgga tttctctaat tacgcttgac
     2701 ccttctccgc gcacggcaga acatgatttc tgccgtacct tcgaaaggag agctcaatgg
     2761 aaattcttac caccccacaa tcaaatttag acgtgattcg ctcctggaaa gatcccaaat
     2821 accgccgcag ccttaccgcc cagcagttgc aggccatccc ggagcacccg gccggttcat
     2881 tcatgatcac tgaacaggaa atgaaagtcg cgagcggact catgatggaa gacgaagact
     2941 tttccatccc cctgactacg gcgcttggct gcactgacta caccttccat agctggaagt
     3001 cctgcggctg ctgacggcca acccttcgaa acggcacggc attagccgtg cctttcctgc
     3061 aactactctt agggattcac gtgcaaaagt gctgcgtttt tcctgaaact gtcaatccat
     3121 aaatcgtgca ttcaacctcg actcagaaac tcccgtcctt cataaccaat cactcctgga
     3181 aacgcgccct ttctctctca gaacgtcttt ttagtcttcg ctccagcgat gcaactgcgc
     3241 ttacctttga cggggatctc gctgcccaga cactcgccct ctggaaatcg acctcgcctt
     3301 tcgataaagg cttatggttt cacaagcgcc tgcagcaaag cggcctcacg gaatctgaat
     3361 tgacgcaggt tctcgggact tcgcccgaat ctctcaactt cgagcctccc gcatggctgc
     3421 atctgctcgc ccgtgcttat tccagccctg ctgccgaagc ggaccgccca aactgggggc
     3481 ccgtggccag ccatcctgaa gctgggttcc ttagacttgt cgacccgctc ttgtcccagg
     3541 ctcaccgtga actgcagagg cgagctcaag agatcaagca tcgttatccg gatgcgccat
     3601 ttgattcctc atctgctacg cagatccttt atgctaacct cccgccgcgc ctgctcatga
     3661 tcattgccaa gacaatggtg cttgagctgc atgttgcgcg tttgcagggt acgctgcagg
     3721 gcagcacgcc ggcggagcgc tttcttagct tcactgatcg gctggcgagg ccggcagtcg
     3781 ccgagaatct actcagcgac tatcccgtca tggcaaggcg cttggccctc tcagtcgaaa
     3841 actggaagaa cgtgagcgcg gaatttcttg agcaccttgc cattgactgg ccggaaatca
     3901 ccaggctctt caacctcaac gccgaatgcg ggctgctcac tctggctgcc gcaggtgcgg
     3961 gagataccca tcgccatggt cgctcggtcg tgatcgccca gtttgccagt ggctttcaac
     4021 ttgtctataa gcctcgctcc actgcggtgg accagcattt ccagcagttt cttgaatgga
     4081 cgaacagcaa aggcgccagc cctccattac gcacgctaaa agtgctcgat cgcacctccc
     4141 gtggctgggt agagttcgcg cacacctcac gctgccagtc ggatgaagat gtcatccgat
     4201 tttatgaacg ccagggcgag taccttgcca tcctttatat tttgcaggcc actgacttcc
     4261 attttgaaaa cctgctggcc tgcggggaac atcctgttct ggtcgacctt gaagcgctgc
     4321 tccatccgtg gctgcgccaa attgaaattc agcagcctga tgcacgcatg gtggtactgg
     4381 ccaaaagccg ctctgtgctt cgtaccggat tactcccgcg gcgtaccgga aagcatgctg
     4441 attacgcggg cattgacctg agcgggcttg gtggcgcagc cggccagatc actgacaaca
     4501 ttttgcagtg ggtggctgaa ggcactgacg aaatggctgc cgtgcgccag ccctttcgca
     4561 tgcccggcgc tcgcaaccgc cccactgtgg aaggtgccga cattgacgtt cgttactacg
     4621 tagaatcaat cgtcacaggc ttcgcccgga tgtatgagct gctgcgtgca catcgagacg
     4681 aactgttgag cgaagccggc ccgctcaatc actttgcgcg tgacgaagtg cgcgtcgtcg
     4741 cccgcgctac acgcggttac ggcgtgctgc tctcgcaatc gctccatcct gactacctgc
     4801 gcgattcggt tgagcttgag ctgctgctcg atcggctgtg ggttggcgtg gaggagaatt
     4861 ctcacttgct ggcgctcatc aacttcgagc atcgcgacct catgcagggt gacatcccta
     4921 tatttaccac ccagccagca tcgagcgatc tcctgagcag ccgtggagaa aagcttcacg
     4981 cctatctgac caagtcgggc cttgaactcg cgcgtgaggt cgtcgaaggc cttgctgatg
     5041 ccgatcttcg gcgtcagatt tggtttatcc gtgcctcact tgccacgctt gatctcgcgg
     5101 gagatgacct gacccgcggt cgttacgagc cggttacccc cagtcgcctt ctgtcgcaag
     5161 aagagctctc accacggctg atcgaacaag ccaggatcat tggcgaccgg ctggaacaac
     5221 ttgcattgca ggagccgagc gacgccacat ggatcggctt tgcctacgtg aacaaaatat
     5281 ggtcgctcga tgccctgctt gaagatcttt ataccggatc ttcaggaatc attttcgtat
     5341 tggcgtatat cggctcattt ggatatccga actttaccga gctagcccgc agcggtttga
     5401 acacgctgcg ctcgcgcatg gagcagcgca cgaaagtcct gcgttccatc ggcgcctttg
     5461 atggatgggg cggcatcatc tatctgctcg ctcatcttgg agcgctctgg catgacgatg
     5521 acctcatcgc ctgggctgaa accatcgtgg ctcggctgcc cgagttcatt agcgaagaca
     5581 aggccctcga cgtcatcggc ggctccgccg gatgcatcgg tgctctgctc gcgctgaatg
     5641 aagtcgcgcc ctcaccgaaa actctggccg tagctgtgca atgtggcgac cgcctgctcg
     5701 ccaaagtgca ggtcgtgccc ggcggtgtgg gatggttcaa caacatcgaa accgaaaagc
     5761 cgatcaccgg gtttgctcac ggcgctgccg gaattgcgtg ggccctgctt gaactggctt
     5821 cggccaccgg aaaagatcgt taccgcgaaa ccgccttgca ggcgctcacc tacgagcaca
     5881 ctcaatattc ttcagccacg ggtaactggg tggacaatgc cggcgaaaag ccgaccactg
     5941 ggccttccat ggcatggtgc tacggggcgc cgggaatcgg ccttgcccgt gtgggagcgc
     6001 tgagacacac gagcggcgac tcgtgcgtgc aggaagacct tgaccgcgcc gtcaaagtga
     6061 ccctctccag cggcttcgga gcgaaccact cgctctgcca cggtgatctc ggcaacctcg
     6121 agtttcttct ccaggcagtc caattaacgc gcagcgcaga gctcgccgcc aaggtaaacg
     6181 aactcgcgaa tcagatcctt gccagcgtcg agaaacacgg gccgctctgc ggagtgccgc
     6241 tggctgtgga atcgcccgcc ctgatgaacg ggctggcagg catctgctat ggcctcttac
     6301 gcctcgcagc gccagaacgc gtgccctcgg tgctcacgct ggagccgcca gtcagaaata
     6361 gccgcggata aacgcgaata gcgctctgca ctgatcccga tcacccgttc acccggtcac
     6421 cagatcccgc gattttccgc ctccgtggta ggtttatctt tgccatgaaa ctcgccttcg
     6481 ctttcttgct tctcgccacc gccaccgcgc aagattggaa gcctcttcct gttaacacca
     6541 ctgccagcct gcgcggcctc agcgtggtga acgaacagat cgtctgggca agcggcactg
     6601 gaggaactgt tctgcgcacg atcgactcgg gcaaaacctg gtctgttctc accgtcactg
     6661 gcgccgaatc gctcgatctc cgcggcatcc gtgctttcaa cgcaaacaac gcagtcgtca
     6721 tcagctccgg cccggcggaa aagggccagg cccgcatcta ccgcacaacc aatggcggca
     6781 agagctggaa caaagtcttc gagcaaacca tcgccggaat tttcttcgat gccgttgcct
     6841 tctgggacca gaaacacggc atcgtgctga gcgatcccgt tgccggcaag ttcgcgctct
     6901 tcaccaccga cgacgg
//
LOCUS       DASQYP010000071         8651 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_216046, whole genome shotgun sequence.
ACCESSION   DASQYP010000071 DASQYP010000000
VERSION     DASQYP010000071.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 8651)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8651)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8651
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_216046"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1017
                     /locus_tag="VE783_02290"
     CDS             <1..1017
                     /locus_tag="VE783_02290"
                     /inference="COORDINATES: protein motif:HMM:NF014516.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52251.1"
                     /translation="SAAAEKQQREAENAQIEERLQALSAEKLAAEATGVQLQHESDQV
                     RARIAEIDQELKAARAELNLARDRRADLGQQLAKLQSDLAHMGETCQNELNVSSDGLR
                     ADSGIPLVEGEQLVAEETTYREMRTKLENMGPVNMMALEEFKETEQRHQFLETQRKDL
                     LDSIENTQATIKEIDEFSRQKFQEAFDRINENFQFTFRKLFGGGQAFMRLTDELNTAE
                     SGIDVVASPPGKKLQNVLLLSGGEKALTALSLLVGIFQYQPSPFCILDEVDAPLDEAN
                     VGRFTELVREMAVQTQFIIITHSKKTMSVAPVMYGVTMQEPGVSKVVSVNFGQESNLQ
                     KASA"
     gene            1239..2150
                     /locus_tag="VE783_02295"
     CDS             1239..2150
                     /locus_tag="VE783_02295"
                     /EC_number="6.3.2.6"
                     /inference="COORDINATES: protein motif:HMM:NF010568.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004639 -
                     phosphoribosylaminoimidazolesuccinocarboxamide synthase
                     activity [Evidence IEA];
                     GO_process: GO:0006164 - purine nucleotide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylaminoimidazolesuccinocarboxamide
                     synthase"
                     /protein_id="HYX52252.1"
                     /translation="MSPATINRIILQTDIPELKLHARGKVRDIYDLGNQLLFVATDRI
                     SAFDYVLPTGIPEKGRVLTQLSLFWFDFLKNVVKNHLITANVSEYPAELQKFADQLRG
                     RSMLVKKAKMVEIECVARGYLSGSGWKEYQRDQSVCGIKLPAGLQDSSKLPEPIFTPA
                     TKALSGHDENISFEQMVQHTGRELAEKLRDLTLNVYKTAADYALTKGIIIADTKFEFG
                     FTEDGLILADEVLTPDSSRFWPADKYEAGRAQASYDKQFVRDYLEQIKWNKQPPAPAL
                     PEEVARQTSEKYIQAYRTLAGRELPTG"
     gene            2165..2716
                     /locus_tag="VE783_02300"
     CDS             2165..2716
                     /locus_tag="VE783_02300"
                     /inference="COORDINATES: protein motif:HMM:NF014704.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CvpA family protein"
                     /protein_id="HYX52253.1"
                     /translation="MNALDWVILLILMFSALLAAAQGFLFEVISLAGAVLGYLTAAWG
                     YARLAPWFLQYVKSQAFADLFGFLTIFFAVVILAGAIARIARWMIREVGLRWVDRALG
                     AAFGFVRGIVIITAGLLALTAFDPGSAELRDSQLAGYFQLAGSGASWLAPSEIRQKFR
                     QGIQSLRGISADPAAGKPDARKK"
     gene            2713..3036
                     /locus_tag="VE783_02305"
     CDS             2713..3036
                     /locus_tag="VE783_02305"
                     /inference="COORDINATES: protein motif:HMM:NF014950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HYX52254.1"
                     /translation="MTQAELITAIEGEDIVKDQLEALVAQMHSSGILYSEAVREFKKR
                     FIMNVLQQNKGNQCKAARELGMHRNTLSRTIAELKMDVRQFREGGRRPVRSERAIPLE
                     KKAVR"
     gene            3074..3883
                     /locus_tag="VE783_02310"
     CDS             3074..3883
                     /locus_tag="VE783_02310"
                     /inference="COORDINATES: protein motif:HMM:NF024811.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD hydrolase-like protein"
                     /protein_id="HYX52255.1"
                     /translation="MPTDTEPLQEQRAFVRPGFEWRTAGAYLFDIDGTLLNSRDLVHY
                     NSFTHAMRDVMGVETTINGLALQGNTEPGILRDALRRVGFDDEAIIPKLPELATAMCE
                     YVREHAQQLRPELCPSILELVNELYGRGKLLGVASGNLETIGWLKLERAGVRHMFSFG
                     SFSVPRQSRAEIFAYGIDQARERLGGSVKVHVIGDTPSDVTAARVVGVPVIALATGIF
                     SYEELLACEPDACFGCGADMLAHTTALNGAGKTAMDETGKATFTSSSATIT"
     gene            3963..4039
                     /locus_tag="VE783_02315"
     tRNA            3963..4039
                     /locus_tag="VE783_02315"
                     /product="tRNA-Asp"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:3997..3999,aa:Asp,seq:gtc)
     gene            complement(4086..6866)
                     /locus_tag="VE783_02320"
     CDS             complement(4086..6866)
                     /locus_tag="VE783_02320"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52256.1"
                     /translation="MEPAPAAASTREERRERVAVIAVHGVGKHEPGASAQGMADLLLG
                     INAFTHPEQGSPYHDFSCENIEIPLPGPEVFKPKEGVKKSDSVFEERRGYFAGQFTPS
                     RWRDERQKRLQVEKAGSPGPDAAKQPAEPDINDEFAVTQLGDYEGDKLVGKYETVRLR
                     GARRGASGEAPNVDIYEMYWADLAKRNNSFIRFFMSFYQLLIHLASLGRTAVDHAALE
                     HGGSIPWLLAQKSCNYASRVLTLGLFNLLVLLPVVAFAPITRALPSDLRPTVAAALLA
                     LGATGAIVWLFSRVFMQGRKSPAAFLAFGAIILITAGGIFFGAKDLFANRNSTGYVLD
                     FAWWLVAFAICSFIFAKYDQVRAGAKRVGQWMLAIVAGGFIGSLIYALKVAPTHAYDA
                     AAFVMVQYIFLALRVLWFSLVGLAVFGWMVELRCLRSVAASSDNQRSGKRARAKAAFR
                     TGRFALAVPTLLLLLLTMFFWNGVFHYSWKTFPIYKTGTALPQAPLPPFLSDALAVKC
                     QELPRLLDSKEAIQCDAGAQDPTSASNEMQLESLLLQSAPVGLPFILVLVTIGFLLLA
                     LLAVPSAIQEEAHPQSATNIASRKLGAWLSGGFAGFPAAIWSFWLAAFGFPAAYMLVV
                     GIHYLMHQHSGESWIFHLYRFALPEFTVRLTLESGPKVAAVAVFIATAGKAIFKSAST
                     ILDTVLDVDNYLRTGPAHRTPRARVVERYVGLLRHVNSRGYDRVVIVAHSLGSLISAD
                     LLRFLNGRRIPALSDFAFAGDQGMCPRIRLFTMGSPLRQLLNRFFPNLYMYIRPVPDD
                     AGEASPVAVPVPAKGTQQIIPVEASPDPEELGIEIWANYYRSGDYVGRSLWLDEWMDR
                     TRGGDNAGAFPHPEAADSFTDANSSRAEACIGLGAHTHYWDRSAPDIGEFLDSLITGR
                     SAEWKDLGATAG"
     gene            complement(7130..8269)
                     /locus_tag="VE783_02325"
     CDS             complement(7130..8269)
                     /locus_tag="VE783_02325"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52257.1"
                     /translation="MLRHFALCALALALHPVSHAITLSVPPDSPRWDLQGNAKVAEYQ
                     GRKALLLDGGAAILKDFELRDGVIDADVATTAKRGFFGFDIRIDKDQANYEEIYLRPH
                     KSGLPDALQYTPVLNTGRNWQLYNGPGFTGAVDIPRDTWFHLRLEVTGAQAKLFVKDM
                     EKPALVMTDLKSGVQKGQIALYVLGGATYYSNFEVRTTPDVPWERHLPPMPAGTLTKW
                     SISPSFDALARNVERPLSPQEIAGIQWQAVEAEPPGFVVLYRYREAPHIRVSFSNDFS
                     KRLDPQPGMKLLYARTTIDSDRDHVKKLEIGYSDDVSVFLNGKILFRGRSAQNFRDPG
                     FLGIVNPEDDVLYLPLHKGSNELVLAVSELGGGWGFICRLSNFEN"
BASE COUNT         1888 a         2312 c         2718 g         1733 t
ORIGIN      
        1 tccgcggcgg cagagaagca acagcgcgaa gccgagaacg cgcagattga agagcggctg
       61 caggcgctct ctgcagagaa gctggcggcc gaggcaacgg gcgtgcagct acagcatgag
      121 tccgaccagg tgcgtgcgcg gatcgcagag attgaccagg agctcaaagc ggcacgggct
      181 gaactgaacc tggctcgcga tcgtcgcgca gatctgggcc agcaactggc gaagctgcaa
      241 tccgatctcg cccacatggg tgagacctgc cagaacgagt tgaacgtaag ctctgacggg
      301 cttcgcgcgg acagtggaat tccgctggtg gaaggcgagc aactcgtggc ggaagagacc
      361 acataccgcg agatgcgcac taagctcgag aacatgggcc cggtgaacat gatggcgctt
      421 gaagaattca aggaaaccga gcagcgccac cagttcctgg agacgcaacg caaagacctg
      481 ctggactcaa tcgagaacac tcaggccacg atcaaggaaa ttgatgagtt ctcgcggcaa
      541 aagttccagg aagctttcga ccgcatcaac gagaacttcc agttcacctt ccgcaagctg
      601 tttggcggcg gccaggcgtt catgcggctc accgatgaac tcaacacggc ggaaagcggc
      661 attgatgtgg tggcctcgcc tccgggcaag aagctgcaaa acgttctctt actctccggc
      721 ggagagaagg ctttgaccgc gttgtcactg ctggtgggca tcttccagta ccagccgagc
      781 ccgttctgca tcctggacga agtggacgcg cctctggatg aagccaatgt gggccgattc
      841 accgaactgg tgagagagat ggcggtgcag acgcagttca tcatcatcac gcacagcaag
      901 aagacgatgt ctgtggcgcc ggtgatgtat ggagtgacca tgcaggagcc cggagtctca
      961 aaggttgtct cggtgaactt cgggcaggag agcaacctgc aaaaagcgtc tgcttaaaaa
     1021 tattttgagc gcgttgttga tctttctgac aacggttact acaaactttt ccgaaaatca
     1081 atgccgtgaa gtccgctaca catgcgggtt tcacggcatc aaacttctga cgcgaagttt
     1141 ttcgaaaaag tccctgacgt ggaccgttaa ccggctcctc acccggttga caaaaacgtc
     1201 tggggcgcta gaataacgcc tcgcctgtct tatctgtcat gagcccagcc acaataaatc
     1261 gcattattct ccagactgat attccggagc tgaagctcca cgctcgcggc aaggtccgcg
     1321 acatatacga tctaggaaat caactgctct ttgttgccac ggacaggatt tccgccttcg
     1381 attacgttct tccaaccggg atcccggaaa aaggccgcgt gctgacgcag ctctcgctgt
     1441 tctggttcga cttcctgaag aatgtggtga aaaaccacct gatcaccgcg aatgtgagcg
     1501 agtatccggc agagctgcaa aaatttgcag accagcttcg tggccgctcc atgctggtga
     1561 agaaagccaa gatggtggag atcgaatgtg tggcgcgcgg atatctctcc ggatcaggat
     1621 ggaaggagta tcagcgggac caatcagtct gcgggatcaa actgccggca ggattgcagg
     1681 attccagcaa gctgccggaa ccgatcttta ctccggcaac gaaagctttg agtggccacg
     1741 acgagaacat ctcgttcgag cagatggtgc agcacacggg acgggaactg gcggagaagc
     1801 tgcgcgacct gacgctgaac gtttataaga ccgccgcgga ttacgcgctg accaagggca
     1861 tcatcattgc cgatacgaag ttcgagtttg gctttacgga agatggattg attctggccg
     1921 atgaagttct cactccggat tcctcgcgct tctggcctgc cgacaaatac gaggcgggac
     1981 gggcgcaggc ctcatacgat aagcagttcg tgcgcgatta tctggagcag atcaagtgga
     2041 acaagcagcc gccagcgcca gctttgccgg aagaggtggc gcggcagacg agcgagaagt
     2101 acatccaggc atacaggacc ctggcggggc gcgagctgcc gaccggttga acggcagcga
     2161 gtgaatgaac gcgctggact gggtcattct gctgatcctg atgttttcgg cgttgctggc
     2221 tgccgcacag gggtttttgt ttgaggtgat ttcgctggca ggagcagtgc tcgggtacct
     2281 gacagcggca tggggatacg cgcggctggc gccgtggttt ctgcaatatg tgaagtcgca
     2341 ggcctttgcg gacctgttcg gtttcttgac gatcttcttt gcggtcgtga tcctggccgg
     2401 agccattgcc aggatcgccc gctggatgat ccgcgaagtc gggcttcggt gggtggatcg
     2461 cgcactggga gcggcattcg gtttcgtacg tgggatcgta atcattactg caggattact
     2521 ggcgctaacg gcttttgatc cgggatcggc agagctgagg gattcacagc tggcaggata
     2581 ctttcagctg gcgggcagcg gagccagttg gctggcgcca tcggaaatcc ggcagaaatt
     2641 caggcagggc attcaatcat tacgcggcat ctcagctgat ccggcagcgg gcaaaccgga
     2701 tgcgaggaaa aaatgacgca agctgagctg ataaccgcga tcgaaggaga ggacattgtg
     2761 aaggaccagc tggaagcact tgtggcgcag atgcacagca gtggcattct ttactcggaa
     2821 gcggtccgcg aatttaagaa gcgcttcatc atgaacgtgc tgcagcagaa caagggcaac
     2881 cagtgcaaag cggcccgcga gctggggatg caccgcaaca ccctcagccg caccatcgcc
     2941 gaactcaaga tggacgttcg ccagtttcgt gagggcgggc gacgcccggt acgaagcgag
     3001 agagccattc cgctggagaa gaaagctgtc cggtagtgac agctatcccc gcagaaactg
     3061 aatcatagac aaaatgccca ctgataccga gccccttcag gagcagcgcg cctttgtgcg
     3121 tcccggattt gaatggcgca cagccggagc atatcttttc gatatagacg gtacgctgct
     3181 gaacagccgg gacctggtcc actacaactc tttcacgcat gccatgcgcg atgtgatggg
     3241 cgtggagacc acgatcaacg gtcttgcgct ccagggaaat accgagccag gcattctgcg
     3301 cgacgcgttg cggcgagtgg ggtttgacga tgaagcgatc atcccaaagc tgccggaact
     3361 ggcgactgca atgtgcgagt atgtacgcga gcacgcgcag cagctgcggc cggagctctg
     3421 cccttcaatc ctggaactgg tgaatgagct ctacgggcgc ggcaagttgc tgggtgtagc
     3481 atcaggaaac ctggagacga ttggctggct caagctggag cgtgccggcg tgcggcacat
     3541 gttttcgttc ggatcgttct cggtgccaag gcaatcgaga gcagagattt ttgcctacgg
     3601 aatcgaccag gcccgtgagc ggttgggagg gtcagtaaaa gttcacgtta ttggggatac
     3661 accttctgac gttacggcag cgcgggtggt tggtgtgccg gtgatcgctc tggcaacggg
     3721 gattttctcg tacgaggagc tgttagcatg cgagccggat gcatgctttg gctgcggtgc
     3781 ggacatgctg gcgcacacca ccgcgctgaa tggggcgggt aaaaccgcga tggatgagac
     3841 agggaaggcg acgtttacca gttcatctgc tacaattacc taagaaagac aaagctgact
     3901 gcgcagtgat acgttgttca tacctgcacc gccggtcgag tgagtccaat cgcaaaaaag
     3961 ctggggacgt agttcagttg gttagaacgc tgccctgtca cggcagaggt cgcgagttcg
     4021 agtctcgtcg tccccgccag ctttttcctt ccttcaaact tttattgctc acgcgagcgc
     4081 gactgctacc cagcggttgc cccaaggtcc ttccactctg ctgatcggcc ggtgatcagc
     4141 gaatccaaaa actctcctat gtctggcgcg ctgcggtccc agtaatgcgt gtgcgctccc
     4201 aatccgatac aggcttccgc acgactggag tttgcatcgg taaacgaatc agcggcttca
     4261 ggatggggaa atgctcccgc gttgtcgcca ccgcgagtac gatccatcca ttcatcgagc
     4321 cataaggatc gcccaacgta atcaccgctc cggtaatagt tggcccagat ctcgatgccg
     4381 agctcctcgg gatctggtga tgcttccact ggaatgattt gttgtgttcc cttcgcaggt
     4441 acgggaacag cgacgggcga agcctctccg gcatcgtcag gcactggacg aatgtacata
     4501 tagagattgg ggaagaaccg gttcaggagc tggcgcagcg ggctgcccat ggtaaacagg
     4561 cgaattcgcg gacacattcc ctggtcgccg gcgaaagcaa agtcgctgag cgcgggaatt
     4621 cttctgccat tcaggaagcg cagcaggtcg gcgctgatca gtgacccaag gctgtgcgcc
     4681 acgatgacga cgcgatcgta tccgcgggag tttacgtgac gcagcagacc aacgtagcgc
     4741 tctaccacgc gagctcgggg ggtgcggtga gctgggccgg tacggagata gttgtccacg
     4801 tcgagcactg tatccaggat cgtgctggcg gatttaaaga tcgctttgcc tgccgtggcg
     4861 atgaagaccg cgacggcggc cactttgggt ccgctttcca gcgtcaagcg caccgtaaat
     4921 tcgggcaagg cgaatctata caggtggaaa atccatgatt cgccggagtg ctggtgcatt
     4981 aagtagtgga taccaacaac cagcatgtag gctgcgggaa atccgaaggc ggcaagccag
     5041 aatgaccaga tggccgccgg gaaacccgca aatcctccgg aaagccatgc tccaagtttt
     5101 cgcgaagcga tatttgtcgc gctctgcgga tgcgcttcct cctgtatggc ggagggaacg
     5161 gcgagcagtg cgagcaggag aaagccaatc gtcacgagca ccagaataaa gggcagtccc
     5221 accggagcgc tttgcagcag cagcgactcc agttgcattt cgttggaagc ggaggttgga
     5281 tcctgcgcac ctgcatcaca ctgaatggct tctttcgaat ccagaagcct cggtaactcc
     5341 tggcatttca ccgcaagggc atcagacagg aaaggcggga gcggagcctg cggcagagct
     5401 gttccggttt tgtagattgg gaaggtcttc caggaataat ggaacactcc gttccagaag
     5461 aacatggtca acagaagtag caggagagtg ggaacggcca gagcaaagcg cccggtacgg
     5521 aatgcggctt tggcgcgcgc gcgtttcccg gagcgctggt tgtctgagct tgcagcgaca
     5581 gagcgaaggc acctcagttc caccatccac ccgaacactg cgagacccac aagcgagaac
     5641 cacagcacac gcagagccag aaagatgtac tgcaccatga cgaaagcagc ggcatcatat
     5701 gcgtgcgttg gagccacttt caatgcgtaa atcaaggagc caataaagcc tcccgcgacg
     5761 atggccaaca tccactggcc gacgcgcttt gcgcctgctc tgacctgatc gtatttggcg
     5821 aagatgaagc tgcagattgc gaatgccacg agccaccagg caaagtcgag gacgtagccg
     5881 gtactgttcc tatttgcgaa gagatctttt gcgccgaaga aaatcccgcc agccgtgatc
     5941 aggatgattg cgccgaaggc aaggaacgca gccgggctct ttctgccttg catgaatact
     6001 ctggaaaaca gccacacgat tgcgcccgta gctccgagcg cgagcagcgc tgccgcaacc
     6061 gtgggacgca ggtcagaggg gagagcacgg gtgattggag cgaatgccac caccggcaga
     6121 agcacgagca ggttgaataa tcccagcgtg agaacgcggc tggcgtagtt gcagcttttt
     6181 tgcgcgagca gccatggtat ggagccgccg tgttcaagcg ctgcatggtc cacggcagtg
     6241 cgccccaggc tggccaggtg gatgagcaat tgatagaagg acatgaagaa gcggatgaac
     6301 gagttgttac gttttgccag atccgcccag tacatttcgt atatgtctac gttgggtgcc
     6361 tctcccgagg cgcctctgcg cgcgccgcga aggcggacgg tttcatactt ccccaccagc
     6421 ttgtcgccct cgtagtcgcc cagctgggtt acggcgaact catcattaat gtcgggctcg
     6481 gctggctgtt ttgcagcgtc cggtccgggt gagccagcct tttccacctg caggcgtttc
     6541 tgtcgctcgt cgcgccaccg ggacggagtg aattgcccgg cgaagtagcc tcgccgttct
     6601 tcaaatacgc tgtcagactt ctttactccc tccttcggtt tgaatacctc cgggccgggc
     6661 agcgggattt cgatgttttc gcagctgaaa tcgtggtacg ggctcccctg ctcggggtga
     6721 gtaaaggcgt tgatgccgag aagaaggtca gccatgccct gggcggaggc gccgggctcg
     6781 tgctttccca cgccgtgtac cgcgatcacg gctacacgtt cgcggcgttc ttccctggtc
     6841 gatgcagctg cgggagccgg ttccataaag tttcctccgg ggcgttagaa aatcgccggt
     6901 ctaaagatgg ctgggcgcat tgtctaccgg agagcgtagt ttttccagaa gaattgcgcc
     6961 ctagatatta acgaaatctc gactggcttc ccttgtggat tcgatcggta cattcaagta
     7021 gtcgttttgg gaagatagcg ctgcgggcga gctccggccg acgttgcgaa tagaacggcc
     7081 cggtcacagt ggtgatgcag gtgcgaagag cgggccggga tggcgcggtt caattttcga
     7141 agttgcttaa ccggcagatg aagccccagc cgccgcccag ttcactcacg gcgagaacga
     7201 gttcgttgct gcccttatgc agcggaagat ataaaacgtc gtcttccggg ttgacgatgc
     7261 cgaggaagcc ggggtcgcgg aagttctggg cgctgcggcc gcggaagaga atcttgccgt
     7321 tgagaaatac gctcacgtcg tcgctgtaac cgatctccag tttctttacg tgatcgcggt
     7381 cggagtcaat ggtggtgcgc gcatagagca gcttcatccc gggctgcggg tcaagccgct
     7441 tggaaaagtc gttggagaag ctgacgcgga tgtgaggagc ttcgcggtaa cggtagagca
     7501 ccacaaagcc cggcggttcg gcctcgaccg cctgccactg gatgccggcg atctcttgcg
     7561 gtgagagtgg gcgctcgacg ttgcgagcaa gcgcgtcgaa cgaaggcgag atgctccact
     7621 ttgtcagggt gcctgcgggc atggggggca ggtgacgttc ccacggcaca tcgggcgtgg
     7681 tgcgcacttc aaaattggaa tagtaagtgg cgccgccgag aacgtagagc gcgatctggc
     7741 ctttctgcac gccgctcttc aggtcggtca tcacgagcgc aggcttttcc atgtctttca
     7801 cgaagagctt tgcctgcgcg ccggtgactt caaggcgcag gtggaaccac gtgtcacgtg
     7861 ggatatcaac tgcgccggtg aagccggggc cgttgtagag ttgccagttt cggccggtgt
     7921 tcaggacagg tgtgtattgc agggcatcgg gcaggccgga tttatgtggg cgcaaataga
     7981 tctcctcgta gttggcctgg tctttatcga tgcggatgtc gaagccgaag aagccgcgct
     8041 tggcggtggt ggccacgtcg gcgtcgatga cgccgtcgcg cagttcgaag tctttgagga
     8101 tggccgcgcc gccatcgagc aggagcgcct tgcggccctg atattcagcg actttggcat
     8161 tgccctgaag atcccagcgc ggcgaatccg gcgggacgga gagggtgatg gcgtgcgata
     8221 caggatgaag ggcgagagcc agggcgcaga gcgcgaaatg tcgaagcaaa gttgcctcca
     8281 caagcaggga tgagagcggg accgttgcgg gcccaaactc attcgttttt ttgtgatctg
     8341 gcgaacttag actgaggtgc tcactaaaag tatgcggcgg agggacgagt tgcatactca
     8401 ttaccgccat catgaatgga ttacatcccg caggaaaatg gggagagcag gttgttatct
     8461 aggctcacgc gaaacggcag cggagccggc ccctcacgcc tgcgccctca cattcgttcg
     8521 ggctcggttc ggtgggtcct tcagggggac gggtgttggc aaaagtactg gagtatcggc
     8581 aaggaagccg tttttctggc cggggcaccg ccgaggcggg cggtgccacc ggtgcatgcc
     8641 tgctcaggcc g
//
LOCUS       DASQYP010000072        19900 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_173281, whole genome shotgun sequence.
ACCESSION   DASQYP010000072 DASQYP010000000
VERSION     DASQYP010000072.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 19900)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19900)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19900
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_173281"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2041
                     /gene="fdnG"
                     /locus_tag="VE783_02330"
     CDS             <1..2041
                     /gene="fdnG"
                     /locus_tag="VE783_02330"
                     /EC_number="1.17.5.3"
                     /inference="COORDINATES: protein motif:HMM:TIGR01553.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009326 - formate dehydrogenase complex
                     [Evidence IEA];
                     GO_process: GO:0015942 - formate metabolic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="formate dehydrogenase-N subunit alpha"
                     /protein_id="HYX52258.1"
                     /translation="YDTSLEHPRCVYQLLKKQYSRYTPEMVESITGIPKEQFTKAADL
                     FTSIRQNGDTKKVATIIYAVGWTQHTFGTQIIRTAAMLQLIMGNVGRAGGGVNALRGH
                     SNIQGATDMAGVFDILPGYLKMPVPADKDLKTYLERITPKPAKPKEWDSFNYWSNTPK
                     FATSFLKAMYGDAAKKENDFAFNYLPKIDRKFSWVEMWDGMYRGKVKGLLAFGMNGVM
                     IGPDSQKNIDALKKADWLVVCEIYPDETSSFWESPGITKEEMANIKTEVYRLPGAGFA
                     EKDGTFVNSARWLQWKWAAVPTPGEAKLDQEILARIFLKVREMYQKDGGKFPDPILNA
                     SWSYTNPNNPSLTEVAKEINGKALADLEDPKTKQEIKTGQQLPGFSWLKDDGTTMSGN
                     WLYCGSWTEAGALSQRRDPADPSNLGIHPNWGWSWPMNRRVLYNRASCDLNGKPWDAT
                     RKQVWWNEAAQKWVGNDVPDFKPDSHPKDHMGPFIMNPEGVGRVFVPLAAMADGPFPE
                     HYEPIESPIANPLHPNQSNSPVVKKYTTASDKYGEAKDFPIVCTTYRLTEHYHYWTKN
                     NPVNTQLVPEPFVEIPVELADEIGLKGGEKIKVSSARSTYYAKALVTKRIKPMTIAGK
                     KTYQIGIPIHWGYKGLADGRPENERTPANLLSPTVIDPNAYTPEFKGFLVKIEKA"
     gene            2051..2938
                     /gene="fdxH"
                     /locus_tag="VE783_02335"
     CDS             2051..2938
                     /gene="fdxH"
                     /locus_tag="VE783_02335"
                     /EC_number="1.17.1.9"
                     /inference="COORDINATES: protein motif:HMM:TIGR01582.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008863 - formate dehydrogenase (NAD+)
                     activity [Evidence IEA];
                     GO_process: GO:0045333 - cellular respiration [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="formate dehydrogenase subunit beta"
                     /protein_id="HYX52259.1"
                     /translation="MSNGLMEIKQISGHRGGTPGSGVSRDYDVCKLVDTTTCIGCKAC
                     EVACLEWNGYEFRETTFDNTYQTMPDTAWNFWNLIRFNEVTHDDGSVSWLMRKDQCMH
                     CADPGCLTACPADGAIVQYQNGIVDFNQANCIGCQYCVTGCPFNIPKFNNATKKVYKC
                     TLCSDRVGAGLEPACIKSCPTGCLHFGSKEDMLALASSRVAQIKANTSYKNAGVYDPS
                     GVGGTHVIYVLHDANNPEQYGGLPKDPSVPFFVKMWKGPLKWLGGIAMGLGVAALFGH
                     YVRYGPKPVDEATEQGRAK"
     gene            2935..3651
                     /locus_tag="VE783_02340"
     CDS             2935..3651
                     /locus_tag="VE783_02340"
                     /EC_number="1.17.1.9"
                     /inference="COORDINATES: protein motif:HMM:TIGR01583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009326 - formate dehydrogenase complex
                     [Evidence IEA];
                     GO_function: GO:0008863 - formate dehydrogenase (NAD+)
                     activity [Evidence IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_process: GO:0009061 - anaerobic respiration [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="formate dehydrogenase subunit gamma"
                     /protein_id="HYX52260.1"
                     /translation="MSNVISRHGTDLRGDEIVRYTLKERMCHWIAGLSYLYLFATGLA
                     LFTPYLYWIAYVLGGGPTIRFWHPWVGLVFFASIMWMHSMWKGEMKTTEQDRKWDKTI
                     KAYVTNHDEAVEPAGHFNHGQKQFYWAMFWGSLVLVVTGLLMWFPEVVSGHQGNAAGH
                     ALMPVIVFLHCAAALVTIGAFMIHVYMGIFFVSGGLHGILWGRVPVAWVRAHHPLWLE
                     QAQRENRVVSSTSFRQGADD"
     gene            3648..4412
                     /locus_tag="VE783_02345"
     CDS             3648..4412
                     /locus_tag="VE783_02345"
                     /inference="COORDINATES: protein motif:HMM:NF016131.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate dehydrogenase accessory protein FdhE"
                     /protein_id="HYX52261.1"
                     /translation="MKSSWELRIKRASELIEKNPAVADLLRFYQQLAQFQKSVFEKLN
                     VTEDHDIAVLLPFFPELISVVKHDGSSQLKQAADSLSQASSGELLELINTVWHHEPDS
                     KELAPEFLFFARAILQPYAEYLASRAATQAEGSPPICPFCGARPQVAVLRPEGDGGKR
                     SLICSMCATEWTYRRLKCPNCGEENKDHLPVFVAQELDYIRVDACDTCHTYIKSIDMT
                     KNGRAVPVVDEIATVSLNLWAQEKNYEKFGANLFGI"
     gene            complement(4421..5053)
                     /locus_tag="VE783_02350"
     CDS             complement(4421..5053)
                     /locus_tag="VE783_02350"
                     /inference="COORDINATES: protein motif:HMM:NF015674.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF308 domain-containing protein"
                     /protein_id="HYX52262.1"
                     /translation="MVRLLIKNWWLILLRGIVALAFGIFIFLLQPFFPSALLNPMAYT
                     ALAVIFGLLACGTGSLTLIAALRGAQKPHDTTLLLADGLVALAAGSAVLLIPGLSLSA
                     VIRIIAVTAMVLGLLELLAGTHLRRHITDEWLLIAGGAVSVVFSLFLFMTTTWELAGI
                     LSWVALYAIAAGISMLGLAIRLRGQQHLIHEIAKHQFAKHAANEEKPKAA"
     gene            complement(5217..7976)
                     /locus_tag="VE783_02355"
     CDS             complement(5217..7976)
                     /locus_tag="VE783_02355"
                     /inference="COORDINATES: protein motif:HMM:NF024938.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional acetate--CoA ligase family
                     protein/GNAT family N-acetyltransferase"
                     /protein_id="HYX52263.1"
                     /translation="MSSHSLQDTIVIPESAIDKKTGEKGPAPWSPAPLAPLFHPKTVA
                     VIGATEKPASVGRTLLRNLLDHPFGATIFPVNPTRSNVLGIRCYPNISSIGEQIDLAV
                     VVTPASTVPDVLEECDAAGVRGAVVISAGFAELGSVGKEREGRIRKILSSGRMRLIGP
                     NCVGIMNPRTGLNATFAQSNALPGNIAFLSQSGALCTSILDWSRRENVGFSGFVSVGS
                     MLDVSWGDLIYHFGDDPYTSSILIYMESIGDARSFLSAAREVSLRKPIIVIKPGQTEA
                     ARKAAASHTGSITGADEVFEAAFRRAGILRVSTIGELFDMAEVLSKQPRPQGPRLAVV
                     TNAGGAGVLAADALLASGGQLAEITPETLQSLNSFLPEAWSHANPIDTLGDSGPEVYA
                     RALEVASKDPNCDAVLSILAPQGMTEPEKVATLLSRATEHIKKPLLASWMGGARMQLA
                     ANVLNEAKIPTFEYPDAAARSFAYMWRYSSNLQALYEAPEFTGNLPEDGPKRVADIIK
                     EATEQNRTILTEHESKQILAAYELPVTSSNVVSSADDAVKAADKIGYPVVLKLHSLTV
                     THKSDRGGVALNLQNADAVRNAFESIRAAFSADNSFNGVNVQPMIKPSGYELILGSST
                     DSQFGPVMVFGLGGKLVEVLKDRAHALPALTTTLARRMMENTRIFQALKGVRGEKAVD
                     IEKLEELLVRFSELVVENPRIADIEINPLLAGPDGIIALDSRVILHPSAIKDADLPRP
                     AIRPYPTQYVSTWKANDGMEFKMRPIRPDDEALMVDFHHQLSEMSVYMRFFLPLKLDF
                     RTSHERLFTKCFIDYDREIAIVAEYTDEEGKRRMAGVARLIRKHSDNTAEVAFLIADK
                     FQNRGLGTHLLERMIEIARHERISALEGATLSDNYNMKDMFSRAGFRFSPPEDGVVTA
                     ILHLV"
     gene            complement(8094..8978)
                     /locus_tag="VE783_02360"
     CDS             complement(8094..8978)
                     /locus_tag="VE783_02360"
                     /inference="COORDINATES: protein motif:HMM:NF012791.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0032559 - adenyl ribonucleotide binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HYX52264.1"
                     /translation="MQALQTATSISFKNILFLTDFSEASESALAYALGLARHYNAELF
                     PAHASDPVILTETAAPDVIDEVIEHSRNKLLNLVKDPDIKTHPLFAKGAIENILPRWI
                     EENGIDLIVLGTHGRHGMGRFLLGSTAEFIYRNSTVPVLTVGPHVTLRPYKGFEADNI
                     LFPTDLGPHAEFGAGYALSFARETNARLTFLHVVTLDEAFQHDRTELVNKSFDELKKL
                     TPEDAKEWCKPEQHVEVGDPPAEVIGWAEKERPDLIVLGLPFEKKFSTHFLSGVTYKL
                     VTAAPCPVLTVRDVVNRN"
     gene            complement(9284..10456)
                     /locus_tag="VE783_02365"
     CDS             complement(9284..10456)
                     /locus_tag="VE783_02365"
                     /inference="COORDINATES: protein motif:HMM:NF015331.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SRPBCC family protein"
                     /protein_id="HYX52265.1"
                     /translation="MAGNDKKWMLFGGAAAGAAAFYFLDREKGHQRRATAALATNRLA
                     QAIADGAALGVRDAQQRLTGMAKHAWFSFRREHLDDRVLVERIRSRMGRILSHPHKIH
                     VASDRGTVTLWGQAPREQARELIEAVNSMQGVREIFDHLEDWEPEAGHAAAPRAFHDA
                     RLSTLLNWNPTQRLFAGLAGGALSVYGFRRNDALGNALSGLGTGIVVQSLLKRNVRSI
                     LALTEDCPGFELERTIRVNIPISDLYDFWVNPENYPKVFGHIANVERLGENLYRWTVN
                     GPAGVPVHWEGVITRKESNTLVEWKSVPGSTIGNFGLVRFDANYDASTRLHIRMFYRP
                     PAGILGRFIAELFGADPGQLLTQDLKRMKALFEQDETLVKQIKEGGDEQLLKIAKT"
     gene            10855..11583
                     /locus_tag="VE783_02370"
     CDS             10855..11583
                     /locus_tag="VE783_02370"
                     /inference="COORDINATES: protein motif:HMM:NF012257.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0030552 - cAMP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Crp/Fnr family transcriptional regulator"
                     /protein_id="HYX52266.1"
                     /translation="MAMAYNLQIVENCLKCAHREQRLFCDLPHDALIKLQKVKATSVY
                     PKGTLLCLEGQPPRGIYVLCTGRAKLSTTSAEGKSIILRIAEPGEVLGLTAAVSNTPY
                     EATIETMESSQANFISQEDFVNFLQEFPEVGIKVARQLTHNCKCAYSEIRSLGLSNSV
                     PEKIAKLLLHWSDHPLELARKQAGEIPIRVTLTQEEIAQFVGTSRETVSRVLGDFKRR
                     GYLRIKGATWSILNKPALENLVTT"
     gene            11649..12134
                     /locus_tag="VE783_02375"
     CDS             11649..12134
                     /locus_tag="VE783_02375"
                     /inference="COORDINATES: protein motif:HMM:NF012257.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030551 - cyclic nucleotide binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic nucleotide-binding domain-containing
                     protein"
                     /protein_id="HYX52267.1"
                     /translation="MSATTTHEAETVSNELYTGISPEVRLELEKRERTRKTRPGETLL
                     QYGVMPEQLVLLKSGKVEISVNSSAHDVVLGTIGPGKAFGMRAAMTGEPAEITVTCIG
                     ECEIDEIPIAEFQAVLQSNPQLYFVVAKVLSADLKIVDELLRSCSRRVVSAARKNLRE
                     V"
     gene            12511..13509
                     /locus_tag="VE783_02380"
     CDS             12511..13509
                     /locus_tag="VE783_02380"
                     /inference="COORDINATES: protein motif:HMM:TIGR03508.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DmsE family decaheme c-type cytochrome"
                     /protein_id="HYX52268.1"
                     /translation="MLARKLARWSWGLVLVLSLASWCSAGNNQQNSGKGDASKSQANQ
                     TAGKNAKSSGSTHDQVIDPAQYVGADTCKTCHEEAAKSYDKGPHWKTTLAKHEGPQWQ
                     GCEACHGPGKAHAESGDPSLIIRFPSLSREESSKRCLGCHEFGQEHANFLRSDHLKNN
                     VGCVDCHSIHTPKIQAKLLKAAQPQLCFSCHSDVKPAFSMPTHHRVNEGLIQCTNCHN
                     QHGGFLTRQLRATAAQDQVCFNCHTDKAGPFAFEHAPVKTEGCVSCHSPHGSNNPRLL
                     RRSNINLLCLECHTFTVDAGAPAIPSFHNQAQKYQACTMCHTSIHGSNSDHFFFKP"
     gene            13527..15983
                     /locus_tag="VE783_02385"
     CDS             13527..15983
                     /locus_tag="VE783_02385"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52269.1"
                     /translation="MAKTRNSVTRWEGLVLAFGMLCSLALPAAAQNKSSGEKTTPELS
                     LDSARKSSDLPVWAASNDSLKPESWGPFEVKQIAEFGGRITDFTGNAGTWDSYVNMGT
                     GPRLLEYTIDLNSPTHAGYLFDKFNFSNFGYGGDPNNLSRLTLSKGKIYNFGASFRRD
                     QNIFDYNLFANPLNPATSNPSVPIINSPHEFLLTRRMYDANLGLFPVGSIRFKAGWSR
                     VVNEGTSYSSVHEGTEGLLFQPTLNTTDNFNGEVSFRFIPRTSINYNQFYTYYKGDTS
                     ADLATPQQAGVFGIPGFNLATGVPVQLGLPFNTPAGQPCATPVLATGFANPACNAFIG
                     YGRTGNLRTSYPTEQLSFQSNYWKKLDLAGRFGYSSAEAGNPAFDETFNGLITRSRVR
                     QFAQVGSSLARRISANADFAATYDVTNKLSIVEQFRWDNFRIPTSWSYVTGNLFAATL
                     TANPNVFSPATCPPPFTAATCPQHINASPADLILDQLGQFLRQETFLNTLEAEYAFTP
                     KVSAYLGYRYSHRDITLHDSDTQVQTFFPGPTAALANRGACVGVPLNADGTCTAVVTD
                     VGDDEPTIINYQSALFGVSGRPNNRIRFSFDTELAYADNAFTRISPRHLQIYKGRLSA
                     KPKDWWNAGIAINIRENRNTAADINNKQHNRSYVFTSTLSPAGAIWGVDLSYSYNDIY
                     SQSNICFVSTPVVAPNGGPLTCGTPFLSGLSIYNEQSNYGSGSIYLKPVSRLTTSFGY
                     TITSSNGDTLILNPIAPTGPLAFNYHLPSASLAFDITKNLTYKTGWNYYDYNEKSLPG
                     PTLPRDFRGNTFTLALRYTM"
     gene            16141..16443
                     /locus_tag="VE783_02390"
     CDS             16141..16443
                     /locus_tag="VE783_02390"
                     /inference="COORDINATES: protein motif:HMM:NF012264.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HYX52270.1"
                     /translation="MKKLLVICVTLALVMAMAAPAFADDAAANYKAKCQMCHGPDGKG
                     SAAGQKMGVKPFSELKSSDAEQIKATKDGKGKMPKFDGKLTDDEIKALIAYTKTLK"
     gene            complement(16539..17243)
                     /locus_tag="VE783_02395"
     CDS             complement(16539..17243)
                     /locus_tag="VE783_02395"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52271.1"
                     /translation="MVRDWRIKAGLALMIVSAAGYVAFMEVQASDDSDEIISSSAVWT
                     PGVDQLRTIDQACTAARLRNSSECFAEKMVAHGAPEEAATFTRSYAELNHGTIALLTF
                     FHPLDAVDIGLAYFPNGKEAHHSWVLLNGTPGIIDVNNLEQLPESEMKSDPQYRSTAE
                     AHPRAKLFFEDPQPGTSAEPAAEKLPDGGQRFTASYLIRDGCNSCELLGHADFSFLFN
                     SSGDLKKIAFKSFHKS"
     gene            17614..19410
                     /locus_tag="VE783_02400"
     CDS             17614..19410
                     /locus_tag="VE783_02400"
                     /inference="COORDINATES: protein motif:HMM:NF024629.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 39 protein"
                     /protein_id="HYX52272.1"
                     /translation="MLALAAVIFLGCIISPPSLMDDVDAAHGQLARNMIRTGDWVIPQ
                     LDGVPYMEKAPLPYWLIAVSYLVFGVHDWAARIPFALGGILLCWITMRYGRWAFDRRA
                     GAHAGLAMATSVGLFLFTRILIPDVLVTLCVALCFWAFQRALNEDGEEAHPRRWVAAM
                     AASMAIGVLLKGLIAIVVPMGGILLYLACTRQLFVRETWKRLHLLSGFGIFLAIAAPW
                     HVLATLRMPPHLDFTLRSIPGQYHGFFWFYFMNEHVLRFLGRRYPHDYNTVPVVLFWL
                     LNLVWLFPASLFLPGAFKLNYRPLFRGGSTRLLLLCWIGFLLVFFSFSTTQEYYSMPI
                     YPALAMLAATALDNEAGWATIGRNLLGGVSALAAVTLLLVWFKVHRLPAPGDISQALQ
                     PHPDAYTLSLGHMGDLTMAAFAYLRVPLLLAAMAFLVGAVGAFARSGRYLLVTSGIMM
                     AMFFHASRIALVVFDPYLSSRPLARALMQSPKGELILDGAYYPFSSVLYYADRTALLL
                     NGRKTNLEYGSYAPGAPQVFINDQQFQQLWNGPARYYLVAEVGRAPELARLGGGHLYP
                     IKESGGKALFSNSPSGASAGTSSGRENTRGPW"
     gene            19404..>19900
                     /locus_tag="VE783_02405"
     CDS             19404..>19900
                     /locus_tag="VE783_02405"
                     /inference="COORDINATES: protein motif:HMM:NF025025.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HYX52273.1"
                     /translation="MVVLTAVFGILLAGSLVYCVLVIVATRNYLRVPRAPASELPAVS
                     ILKPLCGHDEGLEENLRSFFVQDYPHYEILFGVHRADDPACQVAERLVQQYSGKVSAR
                     LVVTGESPIPNAKAFSLKRLVLESRHDILVMCDSDVRVAPDLLRRMAAEFEDQRVGLI
                     TCPYRA"
BASE COUNT         4320 a         5642 c         5574 g         4364 t
ORIGIN      
        1 ttacgacaca tctcttgagc atccgcggtg cgtgtatcag ctgctgaaaa agcagtattc
       61 gcgctacacg ccagagatgg ttgaatcgat cacaggaatt cccaaagagc agttcacaaa
      121 agccgccgat ctgttcacgt ccattcgcca gaatggtgac accaagaagg tggctaccat
      181 catttatgcg gtgggctgga cacagcacac ctttggaacg cagatcatcc gcacggctgc
      241 catgctgcag ttgatcatgg gaaacgttgg gcgggccggc ggcggcgtga atgcgttgcg
      301 tggccactcc aatatccaag gcgccacgga catggcgggc gttttcgata tccttcccgg
      361 atacctgaag atgcctgtcc cagcagacaa ggacctgaaa acctacctgg aacgcattac
      421 acccaagccg gccaaaccaa aagagtggga ttctttcaac tactggtcca acactccgaa
      481 gtttgccacc tcattcctga aggcgatgta cggagacgcc gccaagaaag agaatgactt
      541 tgccttcaac tatcttccca agattgaccg caagttcagc tgggttgaga tgtgggacgg
      601 tatgtaccgg ggcaaggtca agggtctgct ggcgttcggc atgaacggcg tgatgatcgg
      661 gccggactcg cagaagaaca ttgacgccct gaagaaggcc gactggctgg tggtgtgcga
      721 aatctatcct gacgaaacca gcagtttctg ggaatctcct ggcattacta aagaggagat
      781 ggcgaacatc aagactgagg tgtaccgcct gcctggagcc ggatttgcgg agaaagatgg
      841 aaccttcgtg aattcagccc gctggctgca atggaagtgg gcggctgttc ccacccctgg
      901 agaagccaag ctcgaccagg aaattctggc tcgcatcttc ctgaaggtcc gcgagatgta
      961 ccagaaggat ggcggcaagt tcccggatcc gatcctgaat gcttcctgga gctacaccaa
     1021 tccgaacaac ccatctctta ccgaggttgc caaagagatt aacggcaaag cgctggctga
     1081 tctggaagat ccgaagacca agcaggaaat caagactggc cagcaactgc cgggcttctc
     1141 atggctcaag gatgacggta ccacgatgag cggcaactgg ctatattgcg gttcatggac
     1201 agaagccggc gcgctatcac aacggcgcga tccggcggac ccatcgaacc ttggaatcca
     1261 tccaaactgg ggctggtcat ggccgatgaa tcgccgcgtc ctgtacaacc gcgcttcctg
     1321 cgatctcaac ggcaagccgt gggacgcaac gcgcaagcag gtctggtgga atgaagcagc
     1381 gcagaagtgg gtgggcaatg acgtgcccga cttcaagcct gattcccatc ccaaggacca
     1441 catgggccca ttcatcatga atcctgaagg cgtgggccgc gtgtttgtgc ctttggcggc
     1501 gatggccgat ggaccgttcc ccgagcacta cgagcccatt gagagcccca ttgcgaatcc
     1561 gcttcacccc aatcaatcca acagtccggt ggtgaagaag tacaccaccg cgtcagacaa
     1621 gtatggtgag gcaaaggatt tcccgattgt ctgcaccacg taccggctca ccgagcacta
     1681 tcactactgg acgaagaaca acccagtgaa tacacagctg gttcccgaac cgtttgtgga
     1741 gataccggtt gaactggctg atgagatagg tttgaaaggc ggcgagaaga tcaaggtcag
     1801 cagcgcgcgg agcacgtact acgcaaaagc gctggtgacc aagcgcatca agccgatgac
     1861 gatcgccggc aagaagacct atcagatcgg cataccgatt cactggggtt acaaaggact
     1921 ggcggatggc cggccggaga acgagcgcac gcctgccaac ctgctttcgc ccacggtgat
     1981 tgaccccaac gcctacacgc cggaattcaa gggattcctg gtgaagatag agaaggccta
     2041 aggagctgcc atgagcaacg gattgatgga aatcaaacag atctccggcc atcgtggcgg
     2101 cacgccgggt agcggggttt cccgcgacta cgacgtctgc aagctggtgg ataccaccac
     2161 ttgcatcggc tgcaaggcct gcgaggttgc gtgtcttgaa tggaacggct atgagttccg
     2221 cgagacgaca ttcgataaca cctaccaaac catgccggac acggcctgga acttctggaa
     2281 cctgattcgg ttcaacgaag ttacgcatga tgacggctcg gtgagctggc tgatgcgcaa
     2341 ggaccagtgc atgcactgcg ctgatccagg ctgccttacc gcctgcccag ccgatggcgc
     2401 tattgtgcag taccagaacg gcatagttga tttcaatcag gcaaactgca ttggctgcca
     2461 gtactgcgtg accggctgcc cgttcaatat ccccaaattc aacaatgcca ccaaaaaggt
     2521 ctacaagtgc acgctgtgct ctgaccgcgt aggcgcgggg ctggagccgg cttgcatcaa
     2581 atcatgtccc acgggctgcc ttcacttcgg cagcaaggaa gacatgctgg cccttgccag
     2641 tagtcgcgtg gcccagatca aagccaacac ctcgtataaa aatgctgggg tctatgatcc
     2701 ttcgggcgtc ggcggcacac acgtgattta cgtgctgcat gacgccaaca atccggaaca
     2761 gtacggcggc ttgcccaaag atccttcagt gcctttcttc gtgaagatgt ggaagggccc
     2821 gctgaagtgg ctgggcggaa tcgccatggg attaggcgtg gcggcgctct tcgggcatta
     2881 cgtccgttac ggaccgaagc ccgtggatga ggccacggag caggggaggg ccaaatgagc
     2941 aacgtaattt cccggcacgg cactgacctt cgcggcgatg agattgtgcg ctatacgctc
     3001 aaggagcgca tgtgccactg gatcgccggc ctgagttacc tctatctctt tgctacaggt
     3061 ctggctttgt tcacgccgta cctgtactgg attgcctacg tgctcggcgg tggtccgacg
     3121 atccgcttct ggcatccgtg ggttggtctg gtcttctttg caagcatcat gtggatgcac
     3181 tccatgtgga agggagagat gaagacgacg gagcaggacc gcaagtggga caagacgatc
     3241 aaagcctatg tgacaaatca cgatgaagcg gtggaaccgg cgggacactt caaccacggc
     3301 cagaagcagt tttactgggc catgttctgg ggttcgctgg tgctggtggt cacgggcttg
     3361 ctgatgtggt tcccggaggt tgtttcaggc catcagggca acgctgcagg ccacgctctg
     3421 atgcccgtca tcgtgttcct gcactgcgcg gctgcgctgg ttaccattgg cgcgttcatg
     3481 atccatgtgt acatgggaat tttctttgtc tccggcggtc tgcacggcat tctgtgggga
     3541 cgcgttcctg tggcatgggt gcgggcgcat cacccattgt ggctggagca ggcgcagcgc
     3601 gaaaatcggg tagtttcgtc caccagcttc agacagggag cggatgattg aagtcttcct
     3661 gggagctgcg tattaaacgg gcgagtgaac tgatcgaaaa gaacccggca gtggcagatt
     3721 tgctgcggtt ctatcaacag ctcgcccagt ttcagaagtc ggtttttgaa aagctcaacg
     3781 tcacggagga ccacgatatt gcggtcctcc tccctttttt cccagagctc atctccgtgg
     3841 tgaagcatga cggctcaagc cagctcaagc aggcggctga ttcactttcg caggccagct
     3901 ccggcgagct actcgaattg atcaatacgg tctggcatca cgagccggac agtaaagaac
     3961 ttgcgccgga atttctgttc ttcgcgcgtg caattcttca gccttacgcc gaatatcttg
     4021 cttcgcgggc agcgacgcaa gcggaaggtt caccgccgat ctgtccgttc tgcggcgcgc
     4081 gtccgcaggt tgcggttttg cgcccggaag gcgatggtgg caagcgttcg ctgatctgct
     4141 cgatgtgcgc aactgaatgg acctatcgcc ggctcaaatg cccgaattgc ggcgaagaaa
     4201 acaaagacca tcttccggtc tttgttgcgc aggaacttga ctacattcgc gtagacgctt
     4261 gtgacacgtg ccatacgtac atcaagtcaa ttgatatgac gaagaacggt cgcgctgtcc
     4321 cggtggtgga cgaaatcgcc accgtctcgc tgaacctctg ggcgcaggaa aaaaactacg
     4381 agaagttcgg cgcgaatctc ttcggcatct gacggagccg ctaggcggct ttgggtttct
     4441 cttcgttcgc ggcgtgcttt gcgaactggt gtttggcgat ttcgtgaatt aggtgttgct
     4501 gtccgcgcaa gcggatggca agacccaaca tcgaaatgcc tgcggcaatc gcataaagag
     4561 ccacccaact gaggattccc gcaagttccc acgttgtggt cataaaaaga aagagcgaga
     4621 acacgacaga aacagcgccg cccgcgatca gcagccattc gtctgtgatg tgcctgcgca
     4681 aatgagtgcc tgcgagcagt tccaaaaggc cgagtaccat tgcagttacg gcaatgatgc
     4741 ggatgactgc ggataacgac aggccgggaa tcagcaacac agcgcttcct gcggccagtg
     4801 ccaccaggcc atcagccaac agcaatgtgg tatcgtgcgg cttctgtgcg ccgcgcaggg
     4861 ctgcaatcaa tgtgagactt cctgtcccgc atgcgagcag accaaaaatc acagccagcg
     4921 ccgtataagc cataggattg agcaacgcgg aagggaagaa gggctgcagc aggaaaatga
     4981 atattccaaa agccagcgcg acgattccgc gcagaaggat caaccaccag ttcttgatca
     5041 gcaggcgtac cataatcgcc tcctgtacta catttcattg tcgcgccgcg ccttgcagcc
     5101 tgctgtgatt catctcacag gagctgtgtg gcaattggac agccgatcgt cgagcgcagc
     5161 acaaagaaag ggcctcgccg caaggcaagg ccctccatgc gcgtcaggag gtcgcgctaa
     5221 acgagatgaa gaattgccgt taccacgccg tcctccggag gagaaaagcg gaagccggcg
     5281 cggctgaaca tgtccttcat gttgtagtta tcggagagcg ttgcgccttc cagcgctgag
     5341 atgcgctcgt gacgggcaat ctcaatcatg cgctccagca ggtgcgtgcc aaggccgcgg
     5401 ttctggaatt tatccgcgat caggaacgcg acttccgcgg tattgtctga gtgcttgcgg
     5461 atcaggcgcg ccacgccggc catgcgccgc ttgccttctt cgtcagtgta ttcggccacg
     5521 atcgcgatct cgcggtcgta gtcaatgaag cacttggtga agagccgctc gtggctggtg
     5581 cggaagtcca gctttagcgg caggaagaat cgcatgtata cgctcatctc ggagagctgg
     5641 tggtggaagt ccaccatcag cgcttcgtcg tccgggcgaa tcgggcgcat cttaaattcc
     5701 atgccgtcat tcgccttcca ggttgagaca tactgcgttg gatatgggcg aatggcaggc
     5761 cgcggcagat cagcatcttt tatcgcggaa ggatgcagga tcacgcgtga atcgagcgcg
     5821 atgatgccat caggtcctgc gagcagcggg ttgatctcga tatccgcgat gcgcgggttt
     5881 tcgactacca gttcgctgaa gcgcaccagc agctcttcca gcttctcgat gtccacggct
     5941 ttctcgccgc ggacaccttt gagagcctgg aagattcgcg tgttttccat catgcgccgc
     6001 gcaagcgttg tggtgagagc cggcaatgcg tgagcgcgat ctttgagcac ttccaccagc
     6061 tttccgccaa gcccgaacac catcactggt ccgaactgag agtcggtcga gctgcccagg
     6121 atgagctcgt agccggatgg tttgatcatc ggctgtacgt tcacgccatt gaagctgttg
     6181 tcggcggaga aagcggctct gatgctttca aacgcatttc gtaccgcgtc cgcattttgc
     6241 aggttcagcg cgacgccgcc gcgatcggac ttgtgggtca cagtcagaga atgaagcttg
     6301 agaaccaccg gatagccgat tttgtcggcg gccttcaccg catcatcagc agagctgacc
     6361 acgttcgacg acgtcacggg aagctcgtac gcggccagaa tctgcttgga ttcgtgctca
     6421 gtcaggattg tgcgattttg ctctgtcgct tccttgatga tgtcggcaac gcgcttcggc
     6481 ccatcttccg gcaggttgcc ggtgaattca ggagcctcat aaagcgcctg caggttcgaa
     6541 ctgtaacgcc acatgtaagc gaagctgcga gcggcggcat cgggatattc aaaggtcggg
     6601 atctttgctt cgttcaggac gttcgccgca agctgcatgc gcgcaccgcc catccagctg
     6661 gcgagcagcg gtttcttgat gtgctcggtc gcccggctga ggagcgttgc cactttttcc
     6721 ggctccgtca tgccttgcgg cgcaaggatg gaaagcacgg catcgcaatt cggatctttc
     6781 gaagcaactt ccagtgcgcg ggcataaacc tcaggcccgg aatctcccag cgtgtcgatg
     6841 ggattcgcat ggctccacgc ttccggcaga aagctattca ggctttgtag ggtttcgggc
     6901 gtgatctctg ccaattggcc gccgcttgcg agtaatgcgt cggcagcgag aacgccagct
     6961 ccgccagcat tggtcactac agcaaggcgt ggtccctgcg gacgcggctg cttgctgagc
     7021 acttcggcca tgtcaaacag ttcgccgatg gtagagacgc gcaaaatgcc ggctcgacga
     7081 aacgcggctt caaagacctc gtcagctcca gtgattgaac cagtatgcga ggctgcggct
     7141 ttccgcgctg cttctgtctg gcccggcttg atcacgatga tcggcttgcg cagcgagact
     7201 tcgcgggcgg cggaaaggaa gctgcgcgcg tcgccgatgg attccatgta gatcagaatg
     7261 ctgcttgtat agggatcgtc accgaagtgg tagatcaggt cgccccagct tacgtcgagc
     7321 atggaaccaa cggagacgaa tccgctgaag cccacgtttt ccctgcggct ccagtcgaga
     7381 atcgaggtgc aaagcgcgcc gctctggctg aggaacgcaa tatttccagg cagcgcattg
     7441 gattgcgcga acgttgcgtt taatccggta cgcggattca tgatgcccac gcaattcggg
     7501 ccgatcagcc gcatccgtcc agaggaaaga atcttcctga ttctcccttc acgctccttg
     7561 cccaccgagc ccagttcggc gaagccggcc gagatcacta ccgcgccacg cacgcccgcg
     7621 gcgtcacact cttccagaac atcaggcacc gtacttgccg gagtaaccac caccgcaaga
     7681 tcaatctgtt cgccgatcga ggagatgttt gggtagcagc gaatgccgag cacgttgctg
     7741 cgcgtcggat tgactggaaa aatagtcgcg ccgaaaggat gatccagcag attacgcaga
     7801 agcgtgcgtc ccacgctggc aggcttctcc gtggctccaa tcacggccac cgttttggga
     7861 tggaacagcg gcgccagcgg cgctggtgac cacggtgccg gccccttttc accagttttc
     7921 ttgtcgattg cactttccgg gatcacgatt gtgtcctgca atgaatgact gctcataaat
     7981 acttgccctt tgttgctcct atgtctatga aaaaagaata acaaccgtat gaagcatagg
     8041 ggtgtgagaa aactcacacc cctatcgctc tcagctctgt ttgtaagctg ttgctagttg
     8101 cggttcacca cgtctctcac cgtgagcacc gggcagggcg ctgcggttac cagcttgtac
     8161 gtaaccccgc tcagaaagtg cgtactgaac tttttctcaa acgggagtcc gagcacaatc
     8221 aggtcagggc gctccttttc cgcccatcca atgacctcag ctggcggatc tcccacttcc
     8281 acgtgctgtt caggcttgca ccactctttc gcgtcttcgg gagtaagctt cttcagctcg
     8341 tcgaacgatt tattcactaa ctcggtgcgg tcatgctgga atgcttcgtc cagcgtgacc
     8401 acgtgcagga atgtgagccg tgcattggtt tcgcgggcga atgacagtgc atacccggct
     8461 ccgaattcgg cgtgcggacc caggtcggtg gggaagagaa tattgtcagc ctcgaatccc
     8521 ttgtacggtc tgagcgtgac gtgcggacca accgtgagca ccggaacggt ggagttgcgg
     8581 taaatgaact cggcggtcga cccgagcagg aaacggccca tgccatgccg gccgtgcgtg
     8641 ccgagcacga tcaggtcaat cccattctcc tcaatccagc ggggaagaat gttctcgatc
     8701 gcgcctttgg cgaacagagg atgagtttta atgtcagggt ctttcaccag gttgagcagc
     8761 ttgttgcggc tgtgttcaat cacctcatcg attacgtcag gagccgcggt ttcggtcagg
     8821 atcacaggat cagacgcatg tgccggaaac agctccgcat tgtagtggcg ggcaagcccg
     8881 agcgcatacg ccagagcgga ttctgacgct tcactgaaat cggtaaggaa caggatgttc
     8941 ttgaaggaaa tgctggttgc agtctgcaat gcttgcatat tatttgacct cctcaaggtg
     9001 gccagaagtg gaccattact tcgtataaat tggggtgcct aaaaccccgg tttgaggaag
     9061 gccagttcgc tgagcggatg aggaagtcag accacgtccc ggccacattc cccggcccgg
     9121 ttgttctcct caagtgttct cccttgctgc tgccaaagca gtgatgtgca tcacgctgca
     9181 ttcctggcgc actggtggct tttgccttaa atgtgaagaa ggatgtgagt gactcacatc
     9241 cttcttcgag gtaaccgcca taaagtagct tttgagtaag cagctaagtt ttagcaattt
     9301 ttagaagttg ttcgtcaccc ccttctttga tttgcttcac caaggtctcg tcctgctcaa
     9361 aaagcgcttt catccgtttc aggtcctgcg tcaatagctg gccgggatct gccccaaata
     9421 gctcagcgat aaaccgtcca agaataccgg cagggggccg gtagaacatc cgtatgtgca
     9481 gtcgcgtgct ggcgtcgtag ttggcatcga accggacaag tccgaaattt ccgatcgtcg
     9541 agccgggcac gctcttccac tccaccagag tgttggactc ttttctggtg attacccctt
     9601 cccagtgcac cggaacgccc gcggggccgt ttacggtcca gcgatacagg ttttcgccca
     9661 gacgctccac gttagcgata tgcccaaaca ccttcgggta attttccgga ttcacccaga
     9721 agtcatacag gtcagaaatg ggaatattca cgcggatcgt ccgctcgagt tcgaaacctg
     9781 ggcagtcctc agtgagggca aggatcgagc gcacgttgcg cttcagaagg ctctgcacca
     9841 caattcccgt tcccagcccg gagagcgcgt tgccaagcgc gtcattgcgc ctgaagccgt
     9901 agacgctaag cgcgcctcca gctaagcctg cgaacagccg ctgcgtggga ttccagttca
     9961 gtagggtcga gagcctggcg tcgtggaatg cccttggcgc cgcggcatgt cccgcttccg
    10021 gctcccagtc ttccaggtga tcgaagattt cgcgcacgcc ctgcatgctg ttgacggctt
    10081 caatcaactc gcgagcctgc tctctgggcg cttgacccca gagtgttacc gtccctcggt
    10141 cggaggccac atggatcttg tgcggatggg agagtatccg tcccatgcgt gagcgaatcc
    10201 gctcaaccag cactcgatcg tcaagatgtt cgcgacggaa gctgaaccag gcatgtttag
    10261 ccatccccgt gaggcgttgc tgggcgtctc ggacaccgag tgccgctcca tccgctatcg
    10321 cctgggccag gcggttggtt gcaagtgcag ccgttgcccg gcgttgatgg cctttttcgc
    10381 gatcaagaaa atagaaggca gcagcgccgg cagcggcgcc gccgaacagc atccacttct
    10441 tgtcattgcc tgccatgtgg acctccgcga gcttggtttc agttttgcgc ccacaaattc
    10501 atttcaccgt gatggccatc accattacgc gtgtgaatgg agattgttaa attcgttgtc
    10561 cgcgccaagt tacgccaagc cctggtgcaa ccggaatcga gtcagtcagc accgcgtgca
    10621 tgtgactgcg agtctgcaaa ttcagcatcg tcattccaca gacatgtgat caccatctgg
    10681 gagtacaaga gtgagaagga taccggtttc cgcgcttggg gagacatctc aaatcgcacc
    10741 taagcctcgc cgtttcagtc ggttgcgccc gatcacaggt gtgatgtagg tcacatatag
    10801 tttgtgactg caaggactaa gctgaatgcg agttccggag tgggagcaat tcatatggca
    10861 atggcttata acctgcaaat cgttgagaac tgtttgaaat gcgctcacag ggagcagcgg
    10921 ctcttctgtg atcttccgca tgacgcactg atcaaattac aaaaagtaaa agcgacatcg
    10981 gtatatccca aaggcacgct gctttgtctt gagggacaac cgccgcgcgg catttacgtt
    11041 ctgtgcaccg gccgcgccaa attatccacg acttctgcgg aaggcaagag catcatcctt
    11101 cgcatcgccg aaccaggcga agtcttgggt ttgactgctg ctgtttccaa cacgccgtat
    11161 gaagccacca ttgagaccat ggaatccagc caggcaaatt tcatttcgca ggaagacttt
    11221 gtgaactttc tgcaggaatt tccggaagtc ggcatcaagg tagcgcgcca gctcacgcac
    11281 aactgcaagt gtgcgtacag cgaaattcgc tctcttggcc tttccaactc cgtgcccgaa
    11341 aaaatagcca agctgctgct gcactggtcg gatcatccgc tggagctggc tagaaaacaa
    11401 gctggcgaga tcccgattcg cgtcaccctg acccaggaag agatcgcaca gtttgtgggg
    11461 acctcgcgcg agacggtgtc gcgtgtgctg ggcgatttta aacggcgcgg ctatctccgg
    11521 atcaaaggcg caacctggag catcctgaac aagccggcgc ttgagaacct cgtaaccaca
    11581 taaacatcac gctgcgtggt gactgcggtc acatacgccg gtgatgatga ggcataaagt
    11641 tagcggccat gagtgccaca actacacatg aagcggaaac ggtttccaac gaactgtaca
    11701 caggtatctc gcctgaagta aggctcgaac tcgagaagcg tgagcgcact cgcaagacgc
    11761 gcccgggaga aactctgctg cagtacggcg tcatgccgga acagctggtt ctgctgaaat
    11821 caggcaaggt ggaaatttca gtcaactcca gtgcccatga tgttgttctg ggcaccattg
    11881 gaccgggaaa agcctttggc atgcgcgctg ccatgacggg tgagccggcg gaaatcacgg
    11941 ttacctgcat cggcgaatgc gagattgatg agattcccat tgcggaattt caggctgtgt
    12001 tgcagagcaa tccgcagctc tacttcgtgg tggccaaagt cttaagcgcc gatctcaaga
    12061 ttgttgacga attgctgcgc agctgctcgc ggcgggtggt gagcgcggca cgtaaaaatc
    12121 tgcgcgaagt gtgatcgccg tcacagcggg acgtaatgtt ccctgctaaa ttcacagcca
    12181 tacattggct gtgttgcttc cagagccggg ttcgggggaa tcccggctcc gggagtaaag
    12241 aaagctgctc ctacgatcca tggcaaaaaa gagagccgac tccggctctc tttttatttc
    12301 tctcaatttc tttcccggct catcacgcga accttgctcc cggttctccg ctttacctgt
    12361 tcagaaaacc atgagtttct gttttgtttt catgcaactg ccgggaactc aggtgcagcc
    12421 ctgagtgatg aatgtcacag ataccttgag agcctgattc atatactcac ctgcgttaaa
    12481 tacctccaaa gaggggaatg cgagggtcgc atgttagcaa gaaaactggc acggtggtca
    12541 tgggggctgg tcctcgtgct gtccctggcg tcgtggtgtt cggctggcaa caatcagcag
    12601 aacagcggca aaggcgatgc ctctaaaagc caggccaatc aaacagctgg caagaatgct
    12661 aaatcctccg gcagcactca tgatcaagtc attgatcccg cgcaatacgt aggcgccgat
    12721 acttgcaaaa cgtgtcacga agaggcggcc aagagctacg acaaagggcc ccactggaag
    12781 actacattag ccaagcacga gggaccgcag tggcagggtt gcgaggcatg ccacggccct
    12841 ggcaaagctc acgcggagtc aggcgatccc agcctaatta tccggttccc cagcctctcc
    12901 cgtgaagaat caagcaagcg ctgcctgggg tgccacgaat tcggtcagga acacgcgaac
    12961 ttccttcgct ctgatcacct gaagaacaac gtgggctgcg tcgattgtca ctccatccac
    13021 accccgaaga ttcaggcgaa gctgcttaaa gccgcgcagc cgcagctctg cttctcctgc
    13081 cattccgatg taaagcctgc attctccatg ccgactcacc atcgcgtgaa tgaagggctg
    13141 atccaatgca caaactgcca taaccagcac ggcggttttc tgacgcgcca actgcgcgcc
    13201 actgcggcgc aggaccaggt atgtttcaac tgccatactg ataaagcagg cccgttcgct
    13261 ttcgagcatg cgccggtcaa gactgaaggt tgtgtttcct gccactcacc gcacgggtcg
    13321 aataacccgc ggctcctgag acggagcaac atcaacctgc tctgcctgga atgccatacc
    13381 ttcacggttg acgcaggagc gccagccatt ccgtcgttcc acaaccaggc gcagaaatac
    13441 caggcttgca ccatgtgcca cacatccatt cacgggtcga actctgacca cttcttcttc
    13501 aaaccgtagg gaagggagat acggttatgg caaagacaag aaacagcgtt acacgatggg
    13561 aaggactggt gctggcattc ggcatgctat gctcgctcgc gcttcccgct gcggcacaga
    13621 acaagtcttc tggcgaaaaa acgactccgg agctcagcct ggattccgca agaaaatctt
    13681 ccgaccttcc ggtttgggca gccagtaatg acagcctcaa gcccgagagc tggggaccct
    13741 ttgaggtcaa acagattgcc gaatttggcg ggcgcatcac cgatttcacc ggtaatgccg
    13801 gcacctggga cagttatgta aatatgggca ccggccctcg cctgctggaa tacaccattg
    13861 atctcaattc acccacgcac gcaggatact tgttcgataa atttaatttc agcaattttg
    13921 gctacggcgg cgatcccaac aatctgagcc ggctcactct ctccaagggg aaaatctaca
    13981 atttcggcgc aagctttcgt cgcgatcaga acatcttcga ctacaacctg ttcgcaaacc
    14041 cgctgaaccc ggccacttcc aacccgagtg tgccaatcat caattccccg catgagttcc
    14101 tgctaacccg gcgcatgtat gacgcgaacc tgggtctgtt tccggttggc tccatccgct
    14161 tcaaagccgg atggtcgcgc gtggtaaatg aagggacttc ttactcgagc gttcacgagg
    14221 gtacggaagg attgctgttt cagccgacgc tgaacaccac cgataatttc aacggcgaag
    14281 tgtcatttcg cttcatcccg cggaccagta tcaattacaa ccagttttat acctattaca
    14341 aaggcgatac atccgccgat cttgcaactc cgcaacaggc gggagtgttt ggtatccccg
    14401 ggttcaacct cgccactggt gttccggtcc agctcgggct tccgttcaac acgccagccg
    14461 gccagccctg cgcaacgccg gtgcttgcca ctgggtttgc caatccggca tgcaacgcat
    14521 ttatagggta cgggcgtacc ggcaacctga gaacgtccta tcccaccgag cagctcagct
    14581 tccagagcaa ttactggaaa aaactcgacc tcgcagggcg cttcggctat tccagcgctg
    14641 aagccgggaa tccagcgttc gacgagacct ttaatggctt gatcacccgc agccgcgtgc
    14701 ggcagtttgc ccaggtcggt tcatcgctgg cccgccgtat ttccgcgaat gctgattttg
    14761 cggcaacgta cgacgtcacg aacaagctca gcatcgtgga gcagttccgc tgggacaact
    14821 tccgcattcc cacaagctgg agttacgtta cgggaaattt gtttgccgcc acgctcactg
    14881 caaaccccaa cgtttttagc cccgcaacgt gcccgccacc atttaccgcc gccacatgtc
    14941 cgcaacacat caatgcctca cccgcggatt tgatactcga ccaactgggc cagttcctgc
    15001 gtcaggaaac tttcctgaac accctcgagg cggagtacgc cttcacgccg aaggtcagcg
    15061 cgtatctggg gtaccgctat tcgcatcgcg acatcacgct ccacgacagc gacacccagg
    15121 tgcagacgtt ctttcccggc cccacggcgg ctttggcgaa ccgcggcgcc tgcgtaggcg
    15181 tcccgctcaa tgctgatggc acctgcaccg ccgttgtaac tgacgttggc gatgacgagc
    15241 cgaccatcat caactaccag tcggccctgt tcggggtctc cggacgcccc aacaatcgca
    15301 ttcggttcag ctttgatacc gaactggcat atgccgataa cgcgttcacg cgcatcagcc
    15361 ctcgccacct gcagatctac aagggtcgtt taagcgcaaa gcctaaggac tggtggaatg
    15421 ccggaatcgc cattaacata cgcgaaaacc ggaatactgc ggcggacata aacaacaagc
    15481 aacacaaccg gagctacgtt ttcacttcca ctctgtcgcc ggcgggggcc atctggggcg
    15541 tggatttgtc ctacagttac aacgatattt actcccagag caacatttgc tttgtatcaa
    15601 cacccgtggt ggcgcccaac ggcggtccgc tcacctgcgg aactccgttt ctctccgggc
    15661 tctcgattta taacgagcag tcgaactacg gatcgggttc catctacctg aaaccggttt
    15721 ctcggctgac tacctcgttc ggctacacca taaccagcag caacggggac acgctgattc
    15781 tcaacccgat cgcaccaacc ggtccgctgg ctttcaatta ccatctccct tcggcgtcac
    15841 tggccttcga tattacgaag aacctgacct acaagacggg atggaattat tacgattaca
    15901 acgaaaaatc tctcccaggg cccacgctgc cgcgtgactt ccgcggcaac acgttcaccc
    15961 tggcgttgcg ctataccatg taaaagctct ggtggcctgc gcgtgtcgta caggccgctt
    16021 tccgcctgat tcgctgggcg ggctgctgat gcaaatcagt gttgtactca cggcggtgtg
    16081 ctactttccc ggggccgccg ggttaatatg accgggcact ctcacggagg aaaacaatcg
    16141 atgaagaagc tcttagtgat ctgcgtaaca ctagctctgg tgatggcaat ggctgctccg
    16201 gcatttgccg acgatgccgc tgccaactat aaagccaaat gccagatgtg ccacggtccg
    16261 gacggcaaag gttctgcagc cggacagaag atgggcgtga aaccgttcag cgaacttaaa
    16321 tcgagcgatg ctgaacagat caaggccacc aaagacggca agggcaaaat gccgaaattc
    16381 gatggcaagc tgaccgatga cgagatcaag gcccttattg cgtataccaa gacgctgaag
    16441 taattctgta agttcccaga aggcccgggc gggatgctcg ggcctttttt gctgcggagc
    16501 gactgaagat caaagaatca caatcaaaca atcacaggtt aagacttatg aaacgacttg
    16561 aacgcgatct tcttcaggtc gcctgagctg ttgaataaga aactgaagtc ggcgtgcccc
    16621 agcagttcgc aggaattgca tccatcgcga attaaatagc ttgccgtaaa ccgctggccg
    16681 ccgtccggca gtttctctgc tgcaggctct gcgctggtac ccggctgtgg gtcttcaaaa
    16741 aacaacttgg cacgcggatg tgcctcagca gtgctgcggt actgtgggtc acttttcatt
    16801 tctgattcag gcagctgttc cagattgttt acgtcaatga ttcccggagt accgttcaaa
    16861 agcacccacg agtgatgtgc ctctttgccg tttggaaagt acgcgagccc aatatcaact
    16921 gcgtccagcg gatgaaagaa cgtcagcagc gcgatggtgc cgtgattcag ttcggcatag
    16981 ctgcgcgtaa aggttgcggc ttcctctgga gcgccatggg ccaccatctt ttctgcaaag
    17041 cattcgcttg aattgcgcag gcgggcagcc gtgcatgcct ggtcaatggt cctgagctga
    17101 tccacgccgg gagtccacac cgcggaggaa cttatgatct cgtcagaatc atcgctggct
    17161 tgcacttcca tgaaagcgac ataccctgcg gctgaaacga tcatcagcgc caatcccgcc
    17221 ttgattctcc aatcgcgcac cattcacagc acctcaactt atcaacacgg cccaggagtt
    17281 atcggcacat cttagcaggt tgagagtttt gcaatgggcg ctggtaaatc aatttttgta
    17341 gtgttgcatc cctagccaat ggagggaggc cgggagcagc tctggccttc agtaataacg
    17401 caaatcgctg cattaacaat aatttacaaa tccttcttta taatgagcag caggataatc
    17461 taagaaagca gttccgtccc actgacgatt caagccgtta caggagcagt gattattccc
    17521 tcatcaagag aggttttaga gcaagaagaa gggacgtggc cccaccgccc cgcggaaggc
    17581 gctgctgcgt ttcagtcggt tcatgagtgg tttgtgctcg cgctggctgc agtgattttt
    17641 cttggctgca tcatttctcc tcccagtctg atggacgatg tcgatgccgc gcacgggcag
    17701 cttgcgcgaa atatgattcg caccggggac tgggtgatcc ctcagctaga cggcgttccg
    17761 tacatggaga aagcgccgct tccttactgg ctcattgccg tttcatatct ggtcttcggc
    17821 gtccatgact gggccgcgcg cattccattc gcgctgggcg gaatcctgct ttgctggata
    17881 accatgcgct atggccggtg ggcttttgat cggcgcgccg gcgctcatgc cggcctggca
    17941 atggccactt cggtggggct gtttctgttc acgcgtattc tcattccaga cgtgctcgta
    18001 accctctgtg tggctctctg cttctgggct ttccagcggg ctctgaacga ggatggtgag
    18061 gaagcacatc cgcgtcgctg ggtggcagca atggcggcga gcatggccat cggcgttctg
    18121 ttgaagggac tgatcgccat cgttgttccg atgggcggaa ttctgctgta tctggcctgt
    18181 actcgacagc tgtttgttcg cgaaacctgg aagcggctgc accttctttc tggattcgga
    18241 atctttttgg caattgccgc tccctggcac gtgctggcca cgctgcgcat gccgccccac
    18301 ttggatttca ccttgcgcag catccccggg cagtatcacg gctttttctg gttctacttc
    18361 atgaatgagc acgtgctgcg tttcctgggc cggcgttacc cgcatgatta caatacggtg
    18421 ccagtcgttc ttttctggct cttgaacctg gtgtggctgt ttcctgccag cctgttcttg
    18481 ccgggagcat tcaagttgaa ttatcggccg ctgttccgcg gcgggagcac gcggttattg
    18541 ctcttgtgct ggattggatt tctgctcgtc tttttcagct tttccaccac gcaggagtat
    18601 tactccatgc cgatctatcc tgcactggcg atgctcgccg caaccgcgct ggacaatgaa
    18661 gccggatggg cgaccatcgg ccggaatctg ctgggcggag tgtccgccct ggctgcggtg
    18721 acgctgctgc tggtgtggtt caaagttcat cggctgccgg cgccgggtga tatctcccag
    18781 gccttgcagc cacaccctga cgcctacact ctttcgctcg ggcacatggg cgacctcacg
    18841 atggcggcat tcgcttattt gcgcgtcccg ctgctgcttg cggcgatggc gttcctggtt
    18901 ggcgctgttg gcgccttcgc gcgctccggc cgttatctgc tggtgacctc gggaatcatg
    18961 atggcaatgt tcttccatgc cagccggatt gcactcgtcg tcttcgatcc gtatctttca
    19021 tctcgtccgc tggccagggc attgatgcag tctcccaaag gcgagctgat tttggatggc
    19081 gcctattatc cgttttcgtc agtgctttac tatgcagacc ggactgcctt gctcctgaac
    19141 ggacggaaga ccaatttgga gtatggttct tatgcaccgg gcgcgcccca ggtgtttatc
    19201 aacgaccagc aatttcagca gctttggaac ggcccggcac gatattatct tgtggcagaa
    19261 gttggcaggg cgccggaact ggcgcgactg ggtggcggtc atctataccc gataaaggaa
    19321 agcggcggca aagcactctt ttcaaacagc ccgtctggtg cgtctgcggg cacaagctcc
    19381 ggaagggaga atacgcgcgg accatggtag tactcacggc agtgttcggg attctacttg
    19441 caggatcgct cgtctattgt gtgcttgtaa ttgtcgccac ccgcaattat ctgcgggtcc
    19501 cgcgtgcgcc cgcgtcagaa ctgccggctg tgagcatact caagcctctc tgtggccacg
    19561 atgaggggct ggaagagaac ctccgcagct ttttcgttca agattacccg cactacgaaa
    19621 ttctctttgg cgttcaccgc gctgacgatc cggcatgcca ggtagccgaa cggctggttc
    19681 agcaatattc gggaaaggtg agtgcgcgcc tggtcgtcac gggagagtcg cccattccca
    19741 atgccaaggc gttcagcttg aaaaggctcg ttctggagag ccggcatgac attctcgtga
    19801 tgtgtgacag tgacgtgcgc gtggcgccgg acctgctgcg ccggatggct gccgaatttg
    19861 aagatcagcg cgtagggcta attacctgcc cctatcgcgc
//
LOCUS       DASQYP010000073         3360 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_150692, whole genome shotgun sequence.
ACCESSION   DASQYP010000073 DASQYP010000000
VERSION     DASQYP010000073.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 3360)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3360)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3360
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_150692"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            278..424
                     /locus_tag="VE783_02410"
     CDS             278..424
                     /locus_tag="VE783_02410"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52274.1"
                     /translation="MQRKIFWLLFIVSGLALDFAVPIYWSLALTLPLLVLCWWIAYRS
                     GWFE"
     gene            complement(431..1138)
                     /locus_tag="VE783_02415"
     CDS             complement(431..1138)
                     /locus_tag="VE783_02415"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52275.1"
                     /translation="MAKAKSSVPEILKTLEAQYGVQSSEWPTDPYQFLIWWHCGYPAS
                     DERCAKGWQALTTQIGIEPELLLAATPSKLAAALKSGGMVPELRAMRVKEIAARVKDE
                     FNGELRSALVGTISEARKTLKSFPNIADPGADRILLFAGIAPVAAVPSNCPHVMVRVL
                     QGRERENYGVTYRETQKAVEDGVPKTASPRQQAYLLLKKHGQEICKRTNPKCDSCVLS
                     RSCAYFAGNYRGRSARP"
     gene            1180..1629
                     /locus_tag="VE783_02420"
     CDS             1180..1629
                     /locus_tag="VE783_02420"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52276.1"
                     /translation="MKTTILALLLCGLISPALGQGAPPQGSADQPYVMEYYYKVQWGH
                     QQEFLQLFLKNHYPLLQKNVESGRMLSVKIETPSNHMTEDARWDYRVTIRFKNSTLAT
                     TANPQEEALIKQLWPDQETYKREEQRRFEILLAHWDLPVTDVTPARK"
     gene            complement(1732..1821)
                     /locus_tag="VE783_02425"
     tRNA            complement(1732..1821)
                     /locus_tag="VE783_02425"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(1785..1787),aa:Ser,seq:cga)
     gene            complement(1950..>3360)
                     /locus_tag="VE783_02430"
     CDS             complement(1950..>3360)
                     /locus_tag="VE783_02430"
                     /inference="COORDINATES: protein motif:HMM:TIGR00795.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="L-lactate permease"
                     /protein_id="HYX52277.1"
                     /translation="GGITADRRLQLLLVAFCFGAFIEGCAGFGSPVAIAGAFMIGLGF
                     KPFHSAALNLIANTAPVAWGAIGTPVHMLASVSGLPEPDMNAMIGRILPITAVIVPFW
                     LVRAMVGWAETFEVLPAILVVGVSFASMQYFWANHMDSNLVDITAGLFSLLCTVVFLL
                     FWKPKRIWRFEDDVQDTTHATGIPSVSGASSSSLTAHNYTGGQVFKAWVPFLILSIFV
                     FLWGYKPVKDWMNIHTTPAWKTAEGKPNGGWDTPIHKKVSRDKPVVNKPTPEGAKFPF
                     IWLSATGTGCFLAAVVGGLIRGVSIGKLITIFGHTVFRMRWAVLAISCMLGLGFVTRY
                     SGTDAVLGLAFTHTGWFFPFFGTFLGWLGVALTGSDTSSNALFGSLQRITAEQLHLDP
                     VLMTAANSAGGVMGKMVDAQSICVATAATNQVGNEGMIFRFVVWHSIALGAIVGLIVM
                     FYAYVAPNLVPHGVKFLGQ"
BASE COUNT          750 a         1020 c          918 g          672 t
ORIGIN      
        1 cgagctgagc aggacgctcc gcagcttttc tcctagggcg gtgccgcccg gttcgcgtgt
       61 ggtcaccaca tctactccgg actggcgcag ccactctgcc aatttctcta attgggtcga
      121 cttccccacc ccgtcaagac cttcgaaagt aatgaacttc ccgcgctgtt tgggcacgat
      181 acagatttaa tcacaagaca cgcaggcacg ctttgcggca caatgagatt tcacccgtgc
      241 ccattaccac tcaccgctga gcgtcccgga ggaacgaatg caacgaaaga tcttctggct
      301 gctgttcatc gtgagcggcc tcgcactgga cttcgccgtg ccgatttact ggagcctggc
      361 gctcaccctg cctctcctcg tgttgtgctg gtggatcgcc tatcgcagcg gctggtttga
      421 gtaataccat tcaaggtcgc gcagatcgtc cgcgataatt tcccgcgaag taagcgcacg
      481 aacggctgag cacacagctg tcacatttcg gatttgtgcg tttgcaaatc tcctgaccat
      541 gcttcttcag cagaagatat gcctgctggc gaggagaggc cgtctttggc acaccatctt
      601 caaccgcctt ctgcgtctca cggtaggtga cgccgtaatt ctcgcgttcc ctaccctgga
      661 gcacgcgcac catcacatgc ggacagttcg agggcacagc cgcaaccgga gcgataccgg
      721 caaataagag gatccggtcc gctcccggat cggcgatatt gggaaagctc ttcagcgtct
      781 tgcgcgcctc gctgattgtt cccacaagtg cgctgcgcag ctcgccattg aactcatctt
      841 tcactcgcgc ggcaatctct ttcacgcgca tcgccctcag ctccggaacc atccctccgc
      901 tcttcagtgc cgcagcaagt tttgaaggcg ttgccgccag caaaagctct ggttcaattc
      961 cgatttgcgt tgtgagcgcc tgccatccct tcgcgcatct ctcatcgcta gccggatagc
     1021 cgcagtgcca ccagataagg aactgataag gatcagtagg ccactccgac gactgcaccc
     1081 catactgcgc ctctaacgtc ttcagaattt ccggaaccga gcttttggct ttggccatat
     1141 ccgcgggaat gctactacaa cccttgcttc ggaggacgaa tgaaaacgac cattctggct
     1201 ttattgctgt gcggcttgat ctcgcctgcg ctcggccagg gcgctccgcc gcagggctcg
     1261 gctgatcagc cctacgtcat ggagtactac tacaaagtgc agtggggaca tcagcaggaa
     1321 ttcctgcagc ttttcctgaa gaaccactac ccgctgctgc agaagaacgt ggaaagcggc
     1381 cgcatgctgt ccgtgaagat cgagactccg tcgaatcaca tgacggaaga tgctcgctgg
     1441 gactaccgcg tgaccatccg cttcaaaaac tccaccttgg ccaccacggc gaatccgcag
     1501 gaagaggccc tcatcaaaca gctctggcct gaccaggaaa cctacaagcg cgaggaacag
     1561 cgccggtttg agatcctgtt ggcgcactgg gacctgccgg taacagatgt cactcccgcc
     1621 aggaagtgat ctaacgtgga tgtttttaga tttctgttaa ggatgcaacg gcggcgtgcg
     1681 ccaaacgact ctgcacggat aattgcttat tactatttgg tattactcaa ctggcggaga
     1741 gggagggatt cgaacccccg atacccgtta aggtatggcc gctttcgagg cggctcgttt
     1801 caaccactca cgcacctctc cgcacgtaag aagatcgtgg ttgcagaacc tattttaaca
     1861 ggtgagcggc aggaacgaat gagcgagcaa tggaaacgcc gcccgaatcc gggcggcgtt
     1921 tttgttcccg taaagagact ttcaaccgat cactggccca ggaactttac tccgtgcggc
     1981 accaggttcg gggccacgta ggcatagaac atcacgatca agcccacgat cgcgccgagc
     2041 gcaatagagt gccagaccac gaagcggaag atcatgcctt cgttgccgac ctggttggtc
     2101 gcagcggtgg ccacgcagat agattgcgcg tccaccatct tgcccatcac gccgccggcg
     2161 ctgttggccg cggtcatgag cactgggtcc agatgcaatt gttcagccgt gatgcgctgc
     2221 aagctcccga aaagcgcgtt ggacgaggta tcgctgcccg tcagcgccac gcccagccat
     2281 cccaggaagg tcccgaagaa cgggaagaac catccggtat gggtgaacgc tagtcccaag
     2341 acggcgtcag tccccgagta tcgtgtgacg aatcccagcc ctaacataca tgagatggcc
     2401 agcaccgccc atcgcatcct gaagactgta tgcccgaaga tggtaattaa ctttccaatg
     2461 ctgaccccgc ggatcaaacc accaacaacc gcagccagga agcagccggt acccgtcgcg
     2521 gagagccaga tgaacgggaa cttggcgcct tccggcgttg gtttatttac cactggctta
     2581 tcacgcgaaa ctttcttgtg gatcggcgtg tcccaaccgc cattcggctt gccttcggcc
     2641 gtcttccatg ccggtgtcgt gtgaatgttc atccagtctt tcaccggctt atagccccac
     2701 aggaagacga agatggaaag gatcaggaac ggtacccagg ccttgaacac ctgtccgccg
     2761 gtgtaattgt gggccgtcag gctcgaactg gaagcgccag agacgctcgg gatgccggtg
     2821 gcatgcgttg tatcctgcac gtcatcttca aagcgccaga tgcgtttggg cttccagaac
     2881 aacaaaaaca cgaccgtgca gaggagggag aacagcccgg cggtaatgtc caccaggttg
     2941 ctgtccatat ggttggccca gaaatactgc atggatgcga aggagacgcc cacaaccagg
     3001 atcgcgggca gaacttcaaa ggtctccgcc catcccacca tggcgcgcac cagccagaac
     3061 ggcacgatta cggcggtgat gggaagaata cgcccgatca tggcattcat gtccggctca
     3121 ggaagaccgg acaccgaggc cagcatgtgg accggcgtgc cgatggcgcc ccaagccacc
     3181 ggagcggtat tcgcgatcag gttcagcgcg gcagagtgga acggcttaaa tccaaggccg
     3241 atcataaagg cgcctgcaat cgccaccgga gatccgaagc ccgcgcaacc ttcaataaaa
     3301 gcgccaaagc agaatgcaac cagcagcagt tgcaggcggc ggtcagcggt gatgccgcct
//
LOCUS       DASQYP010000074         7857 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_277531, whole genome shotgun sequence.
ACCESSION   DASQYP010000074 DASQYP010000000
VERSION     DASQYP010000074.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 7857)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7857)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7857
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_277531"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..244
                     /locus_tag="VE783_02435"
     CDS             <1..244
                     /locus_tag="VE783_02435"
                     /inference="COORDINATES: protein motif:HMM:NF012264.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HYX52278.1"
                     /translation="QSQGRRVYNAYCLSCHPAYSTHGDKGPGLKGMYSRPYLPSGLTS
                     TDEHVVQSILHGRGMMPASDLTQQQVDDLVAYMHTL"
     gene            complement(248..769)
                     /locus_tag="VE783_02440"
     CDS             complement(248..769)
                     /locus_tag="VE783_02440"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52279.1"
                     /translation="MNATWQYQNQPLRYAWARLCAWSVELSILCLAIAFFAPEQVRPP
                     MVVIAFALLLIAATDWARNLIEQERRRDLPKLNGVTGGQVFLTVLLAAFYNFTVFEGV
                     TFGVTVLRQADTRLGLILSGLIFVLCCLAAWRNVSLWYRQGTVYGDELREADEFEKLA
                     RKRAEWRRNASRE"
     gene            885..1817
                     /gene="lipA"
                     /locus_tag="VE783_02445"
     CDS             885..1817
                     /gene="lipA"
                     /locus_tag="VE783_02445"
                     /EC_number="2.8.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012727449.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016992 - lipoate synthase activity
                     [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0009107 - lipoate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipoyl synthase"
                     /protein_id="HYX52280.1"
                     /translation="MASPVELVQIDLSPRRPRPKPEWLKARAPLGDNYHSLKKLARTL
                     DLHTVCESAQCPNIGECWNHKTATFMLLGNLCTRRCGFCAVPKGKPEPLDWDEPRRVA
                     EAVATLGLKHAVVTSVNRDDDNVGAAKIFADTIEQIRLQAPGCQVEVLIPDFQGREDC
                     LQIVIEARPEVLNHNTETVPRLYRAVRSGARYQRTLDLLANVKRFAPGMVSKTGVMVG
                     IGETINELIEVFRDLAERNVDILTIGQYLRPSKDHLPITRYYTPDEFALLKREALALG
                     FKHVESGPLVRSSYHAHEQAESTGLISVSRAEAQ"
     gene            complement(1904..2443)
                     /locus_tag="VE783_02450"
     CDS             complement(1904..2443)
                     /locus_tag="VE783_02450"
                     /inference="COORDINATES: protein motif:HMM:NF019886.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HYX52281.1"
                     /translation="MFCRNETRKNEYATSADFQQIFSEEMTGLHQLALLLTADPQKAE
                     ESVVAGLEDSISGNHVFKQWARSWAKRAIIKRAIRAVAPASARQQELESFPATGDMRR
                     DQLIAAVTALDPVDRFVFVIAILEGYSLAETAALLGVSAPQVIAAKTRALEKVTAVLK
                     PDSVVAMYPVAKPKLAATA"
     gene            complement(2678..3145)
                     /locus_tag="VE783_02455"
     CDS             complement(2678..3145)
                     /locus_tag="VE783_02455"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52282.1"
                     /translation="MLIEILKQPDGSGLLRCTRDDDSVTWQKQARHAGYFALHDLTHF
                     AVESTLGCESGFFGLVAQGWDIAETTGKGVRGPLPPEAIEVEKIVGLLDTERASGTLM
                     YVQEFNQLAPRTLTQAELDAIRKLRAELFEKWSAVKAGEALKLTFRASRPVSS"
     gene            4198..5943
                     /locus_tag="VE783_02460"
     CDS             4198..5943
                     /locus_tag="VE783_02460"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52283.1"
                     /translation="MPQKTFFLRLFSGSQRSFQKSYPAKRGTRPPVQSGSSTPKSWKE
                     LLIAPLVVSTIGAFAVQQISAAYGKQQQIIAQQQATEKFLAYFRAEAGMPQQRYAALA
                     SLVRLGNADLAADLIVALPIRYREIEKKPSVDIHNREQKGTPTPTFIESDIEPETQAL
                     EVASGESDGTLTEDEQAFVTFLRLHGEDILPRLCALATDATEGRSRTIENSTAAGALV
                     ISAKDGLSRLERIAFDAIPTTKLSGFALALPRSLPSWLKPMEIDEAARKRREGALRIF
                     ERRLISIRRRRGALNPVWVQKDILDKYQYLRPRLAAAALSPSDDYTEEARASALAVLG
                     LLDWSQTDPSPSLPTYRELASDRSKPLRTRFLAIDLLMNPQNFIPDVQQQLGKLLIFA
                     SPEEQAYWDDLFEGNENIPQAQFFKSVVHETLRQTPSRSDLLHYSQLFADDPKILSAA
                     FATANDDKTKIDVINATRYGNKFTLFSAMVQKFTTDQSPAVRREAFDALLWAANGSYH
                     EKMFMRCVTDIDVRVIEACTRYLSTRKDCQAIQVSGHEVASKSTDVRTRAIVGSLFAE
                     QARACFQRREQARHR"
     gene            complement(6031..7389)
                     /locus_tag="VE783_02465"
     CDS             complement(6031..7389)
                     /locus_tag="VE783_02465"
                     /EC_number="2.7.8.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR03025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar transferase"
                     /protein_id="HYX52284.1"
                     /translation="MHGHKDHVVASGFSAVVDFTVISVTALAWFGATHNLPAQRPLLV
                     FGYALCFLMCASFNRLYRAHLPLVDTAFAVFKSAAAATLAVAAVFYFAGVGAGARPAL
                     FTIALCATGTVSVWRTARILHFRKVRAREEHCTNVLIIGAGKTGRELDQQLSMAGSGY
                     RVVGFLDDHALDHPRVLGKPSELAVIARTHFVDEVVVTIPSKRDLVKKVALHARKLRL
                     DVKVVPELYDGMALNAPVEYLAHLPVRVLHREPIPAQGWLVKRVFDIVLCGLAVLVLA
                     PVFVACALAIWLESGGPIIYRSQRVGRKGRLFTFYKFRTMVNNADAMKEGLEARNERN
                     GILFKLSDDPRITRVGKILRRFSLDEFPQFFNVLKGDMSLVGPRPPLPGEFKRYRLDH
                     LRRLDVQPGITGLWQISSRRDPSFENYMALDLEYIENWSLALDLKIMVRTIPAMLTGT
                     GV"
     gene            complement(7570..>7857)
                     /locus_tag="VE783_02470"
     CDS             complement(7570..>7857)
                     /locus_tag="VE783_02470"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52285.1"
                     /translation="SAQHIQILSNTVTGDPKEKQQVGLLVWSPATDKGGPLMDVTLQG
                     NTVTDVAGEGIKLHTGDSIKLVRNTVRHSAVKNLEITNKATKVTQDGNVLQ"
BASE COUNT         1728 a         2413 c         2050 g         1666 t
ORIGIN      
        1 gcaatcgcag gggaggcgtg tttacaacgc ctactgcctg agctgccacc cagcgtattc
       61 aacgcatggt gataaagggc cggggctgaa aggaatgtac agcaggcctt atctgccaag
      121 cgggttgacg agcactgatg aacatgtggt ccagtcaatc ctccacggcc gcggcatgat
      181 gccggcaagc gatctcaccc agcagcaggt ggatgacctg gtcgcgtaca tgcacacgct
      241 ctagcggcta ttcacggctc gcattgcggc gccactcagc tcgcttgcgg gccagcttct
      301 cgaattcgtc ggcttctctg agttcgtcgc cgtacacggt gccctggcgg taccagaggc
      361 ttacgttccg ccatgccgcc agacagcaga ggacgaagat gaggccggag agaatcaagc
      421 caagcctggt atctgcctgc cggagtacgg ttaccccgaa tgtaacgcct tcaaacaccg
      481 tgaagttgta aaaggcagcc agcagaaccg tgagaaaaac ctgccctccg gttactccat
      541 tgagctttgg cagatcgcgc ctgcgttcct gctcgatcag gttgcgcgcc cagtcggtgg
      601 cggcaatgag gagaagcgcg aacgcgatga ccaccatggg cgggcgcact tgctcgggtg
      661 caaagaaggc aatcgccaga cagaggattg agagctcaac gctccacgcg cacagccgcg
      721 cccaggcata gcgaagcggc tgattctggt actgccatgt cgcattcacg tgcgttcctc
      781 aagcgttatg gtagggcgga agctcgatgg aacccaagtt acgggagtgc tgaatcgttt
      841 ttcccgggcc gctcatcgta gaatagaagg ttaccgatcc ctgaatggcc agccctgtcg
      901 aactcgtaca gattgatctt tcgccgcgcc gccccaggcc caaaccggaa tggttgaagg
      961 cccgtgcgcc tctgggcgac aactatcaca gccttaaaaa gctggcgcga accctggact
     1021 tgcacaccgt ttgcgagtct gcgcagtgcc ccaacatcgg agagtgctgg aaccacaaaa
     1081 ccgccacctt tatgctcctc ggcaatctct gcacccgccg ctgcggcttt tgcgccgttc
     1141 ccaaggggaa gcctgagccg ctcgattggg acgagcctcg ccgggttgcc gaagccgtag
     1201 ccacactcgg cctaaaacat gcggttgtca ccagcgtgaa ccgcgacgat gacaacgtgg
     1261 gcgccgcaaa gattttcgcc gacaccatcg agcagatccg gctgcaagcc cccggatgcc
     1321 aggtcgaagt gctcatccct gactttcagg gccgggaaga ttgcctgcag atcgtgattg
     1381 aggcccgccc cgaagtcctg aaccacaaca ccgagaccgt accacggctt tatcgggccg
     1441 tgcgttccgg cgcgcgatac cagcgtacgc tcgatcttct tgccaatgtg aagcgcttcg
     1501 cccccggcat ggtctcaaaa accggcgtca tggtggggat cggcgaaacc atcaatgagc
     1561 tgatcgaggt ctttcgcgat ctggccgagc gaaacgtaga catcctcacc atagggcaat
     1621 atctgcgtcc ctcgaaagac catctgccca tcacgcgcta ttacacgccc gatgaattcg
     1681 cgcttctcaa gcgagaagct ctcgctcttg ggttcaagca cgtggaatcc ggtccgctgg
     1741 tacgttcctc ttatcacgcg catgaacagg cggagagcac gggattgatc agcgtctcac
     1801 gggcggaagc acagtagcca aatcgcggag acacacatct aaatcaaaag ctgcgcatca
     1861 cgcgcagctt ttttgtcagc gccgatctaa cctctcttac ttctcaggcc gtggccgcca
     1921 gctttggttt tgctaccggg tacatcgcca ccaccgaatc cggcttcagc acggccgtaa
     1981 ccttctccag cgctcgtgtc tttgccgcga tcacctgcgg agcgctcacg ccgagcaatg
     2041 ccgccgtttc cgccagggaa tatccttcaa ggatggcaat cacgaacaca aaccggtcaa
     2101 cgggatcaag cgccgttacc gccgcaatca actggtcgcg acgcatgtcg cccgtcgccg
     2161 gaaaggattc aagctcctgc tgccttgccg atgccggcgc aaccgcccgg atcgcccgct
     2221 tgatgattgc ccgcttggcc catgaacgcg cccactgctt gaacacatga ttgccgctga
     2281 tgctgtcttc caggccggca accactgatt cttccgcttt ctgcgggtcc gccgtgagca
     2341 gcagcgccag ctgatgcagc ccagtcatct cttcactgaa gatctgctga aaatctgcgc
     2401 tggtggcata ttcgttcttg cgggtttcat tacggcaaaa catctcaact cctgcttcct
     2461 tatacggcgt ccactttgct ttcgttcctg cccgcccctc atttgacttg gggcgcccgg
     2521 aaaaagttac agataaccac gctgaaattc tcgccagcat tcttttcgct gttgcggctt
     2581 gcaatgagta cggcgtaaac atgggtttgg attgccggct gcgttcgccg gattcagttt
     2641 ttcgagggag agctttgatt ctggatggtt gcagatctta agagctgact ggccgcgacg
     2701 ctcgaaatgt aagcttgagc gcctcgcctg ctttaaccgc cgaccacttt tcaaacaact
     2761 ctgcccggag cttgcgtatg gcgtccaact ctgcctgcgt cagcgttcgt ggcgcaagct
     2821 ggttgaactc ctgcacatac ataagtgtcc cggaggcgcg ttccgtatca agcagcccaa
     2881 caattttttc cacttcaatc gcttctggcg gcagcggacc gcgtactccc tttccagttg
     2941 tctcagcaat atcccagccc tgcgccacca gcccaaagaa gcctgactcg caccccagcg
     3001 tactctcaac cgcaaagtgg gtcagatcat gcagcgcaaa gtagccggca tgccgggcct
     3061 gcttctgcca cgtcacagaa tcatcgtcgc gggtgcaacg cagcaacccg cttccatccg
     3121 gctgtttcag gatttcgatc agcatcgccc gccacatttt cccgccttcg tccctgttcg
     3181 tcgcaacctc gtcccaacat gtcccgacgt cgtcccggtg ggatatccca atcgatcccg
     3241 acttcgtccc aagctgtccc aagcgctcga tcggccgttc tcattccttg cgatctctgc
     3301 gtctctgcgg tttcaacctg tactttccga tcacagatcg tagtccggaa tttcatcgcc
     3361 ttcgtcccag ttcgtcccga cctcgtccca atccgtcccg acgtcgtccc accgggatat
     3421 cccggttgat cccgacctcg tcccaagctg tcccaaccgt atttgccttt ggctttccga
     3481 tcacgcgcga tcacagcgat tccggcgatt ccggcgatca cgtgccacca ccttccacgg
     3541 tgcaaaatgt aactacttgg taaccacggc aaccgaccct ggggggtacc cccacccctc
     3601 cccgaaaaca aagcacttac gtcagagctc cccggaacct ccccggcgag cttcccgaat
     3661 cgctccccgt cttttcggga tgcttcgagc ttttctcgcg cctcggccca atgctccggg
     3721 gtaaccacat cgccaactcc gggtccccgg caatcgcggt gttggattgc tgggtggaat
     3781 tgctttactc gccactagct gattgcaggt cactatttat cctcatttat cctctattca
     3841 gttgtcgaag accgtgaccc ggggaacggg tgcctcctgg gaagcatttc gcagggcaac
     3901 aaaccgctcg cgcagcactc cccctgaaga aatcatccca acatatcacg gatttccccc
     3961 gaagcaacag cgaaatagga catccctgcg gcaggcgaag gtactacgca agctattaca
     4021 ccgcccagaa tcacaaaaga agggggaata cctattccac ttcgtacccc ttcgaatcgc
     4081 aaagaaaaac tcttgaattt ttaagaactg ctgctacact tccatgccac tcaaacgcca
     4141 tttgatccgc gccacgttga cttacgtcac gagacggcat ctagataagg gattgcgatg
     4201 cctcagaaga ccttcttttt gagacttttt tcgggctccc aacgctcctt ccagaaatcc
     4261 tacccggcca aacgcggcac gcgaccccca gtacagtcag ggtcatctac acccaagagt
     4321 tggaaagagc tgctcatcgc ccctttggtg gtatcaacaa tcggtgcgtt cgcggtccag
     4381 caaatctccg ctgcatatgg caagcaacag cagatcatcg cccagcagca agccactgag
     4441 aagttccttg cttatttcag agcggaagct ggtatgccgc aacagcgtta tgctgcactt
     4501 gcgtctttgg taaggctcgg aaacgctgat ttagccgctg atctgattgt ggctctgcca
     4561 atcagatatc gagagataga aaaaaaaccg tcggttgata ttcacaaccg tgagcaaaag
     4621 ggaacgccta cacccacttt tattgaatcc gatattgaac ccgagaccca ggcacttgaa
     4681 gtggcttctg gagaatctga cggcaccttg actgaagacg agcaagcatt tgtgactttc
     4741 ctgcggcttc acggggaaga cattttgccg agattatgcg cgctcgccac tgatgctacg
     4801 gagggacgca gcagaacaat cgaaaacagc accgctgcgg gggctctcgt gattagcgcc
     4861 aaggacggac tttcaaggct tgagagaatt gcctttgacg cgattccaac taccaaattg
     4921 agtggatttg ctttggctct tccgcgctcg ttgccgtctt ggctgaaacc tatggaaata
     4981 gatgaggcgg cgcgaaagcg acgagaggga gcccttcgaa ttttcgagcg gcggctgata
     5041 tcaataagga ggagaagagg agcgctaaac cccgtttggg ttcagaaaga cattcttgac
     5101 aaataccaat acctgagacc ccggctcgcc gcagcggcac taagtccttc ggacgattac
     5161 accgaggagg cgcgagcgag tgctttggcc gtcctgggcc tccttgactg gtctcaaact
     5221 gacccgtcgc cgagccttcc gacatatagg gagttagctt cggacagaag caagcctctg
     5281 agaacgaggt ttctcgcaat tgatctgcta atgaatcctc aaaacttcat ccctgacgtt
     5341 cagcagcaat taggtaaact gctgattttc gcgtcccctg aggaacaagc gtattgggat
     5401 gatctcttcg aaggaaacga gaatattccg caagcacaat tcttcaagag tgtggttcac
     5461 gaaacactcc ggcaaacacc gtcacggtcg gatttgcttc actattcaca gcttttcgcc
     5521 gatgatccaa agattttgtc tgccgctttc gccactgcga acgatgataa gaccaaaatc
     5581 gacgttatca atgccactag atacgggaac aaatttaccc ttttttcggc gatggtacaa
     5641 aaattcacca ccgaccaaag tccagcagtg cggcgtgagg cattcgacgc actactttgg
     5701 gctgcgaacg gctcatacca tgagaaaatg ttcatgcgat gcgtcactga tatcgatgtt
     5761 cgagtgattg aagcatgtac acgatatctc tcgacccgta aagactgcca ggcgatccag
     5821 gtgtccggac atgaagtggc ctctaaaagc actgacgtgc gtaccagagc catcgtcgga
     5881 agcctattcg ctgaacaggc acgggcgtgc tttcaacggc gggagcaggc aagacatcgc
     5941 tgatgcggcc ccgaataacg ccacaaatcc acggacattc tgcgcccgaa aacaatgagg
     6001 gcgcttctgc cgcccacttc agatgagctt ttaaaccccc gtccccgtca gcatggctgg
     6061 gatcgtccgc accatgatct tcaggtccag agccaggctc cagttctcaa tgtactcgag
     6121 atcgagcgcc atgtagtttt caaatgaggg atcgcgccgt gagctgatct gccacaggcc
     6181 cgtgattccc ggctgcacgt ccagccggcg caggtggtcc agccggtagc gcttgaattc
     6241 acccggcagc ggaggccgcg gccccaccag gctcatatca cccttcagta cgttgaagaa
     6301 ctgcgggaac tcgtccaggc tgaaccgcct caggattttg cccacgcggg tgattcgggg
     6361 atcgtcggag agcttaaaga ggatgccgtt gcgctcattg cgcgcttcca gcccttcctt
     6421 cattgcatcg gcgttgttca ccatggtgcg gaacttgtag aaggtgaaca gccgtccttt
     6481 tcttcccacg cgctgcgagc ggtagatgat cggtccgccc gattccagcc agatcgccag
     6541 ggcgcaagcc acaaacaccg gagccagcac cagaacggcc agcccgcaca atacgatgtc
     6601 gaaaacccgc tttaccagcc agccctgcgc cggaatcggt tcacgatgca gcacgcgtac
     6661 cggcaggtgc gccagatact ccacgggcgc attcagggcc atgccgtcgt aaagctccgg
     6721 aaccactttt acatccaggc gaagcttgcg ggcatgcagc gccaccttct ttaccaggtc
     6781 gcgtttcgaa gggatcgtga ccacaacttc atccacaaaa tgcgtcctgg cgatcactgc
     6841 cagttcgctc ggtttgccca gcacccgagg gtggtcaaga gcatggtcat ccaggaatcc
     6901 tacgacgcga tagcccgatc cggccatact gagctgctgg tcaagttcgc gtcccgtttt
     6961 ccccgcgccg atgatcaaca cgttggtgca atgttcctcg cgcgcgcgca cctttctgaa
     7021 gtggaggata cgcgcggtgc gccagactga aactgttcct gttgcacaaa gggcaatcgt
     7081 aaacagggcc ggacgggcgc ctgcgcccac accggcgaaa taaaataccg ccgccactgc
     7141 cagggtggcg gccgcagccg atttgaatac tgcgaacgcc gtatccacca ggggaagatg
     7201 cgcgcgatag agccggttga agctggcgca catcaggaaa cacagcgcgt agccaaacac
     7261 cagcagaggc cgctgcgcag gcaggttatg cgtcgccccg aaccacgcga gcgccgtaac
     7321 agagatcacc gtgaaatcaa ctacagcgga gaagcccgac gccacaacgt gatctttgtg
     7381 accatgcata accggtgctt cagtgcggcg gcgcagggtc cttcgccgtg cgggtagtgc
     7441 gcgatgcagc acggggtcag cagctgacgc gtatgcgttc aaatccggaa gttgattgcc
     7501 tagcatattg ctctttccac gaaccttccc actagagacg ttctggcctc aaaacagtta
     7561 tgtgccgctt tactgcaaaa cgtttccatc ttgcgtgacc ttggtggctt tattagtgat
     7621 ttctaaattc ttaaccgcgc tgtgccgtac cgtattgcga accagcttga tggagtcgcc
     7681 cgtatggagc ttgatccctt cacccgccac gtccgtcact gtattgcctt gcagcgtaac
     7741 atccataagc ggcccgcctt tatcggttgc cggactccaa accagcagcc ccacctgctg
     7801 cttctctttc gggtcccctg tcacggtgtt ggacagaatc tgaatgtgct gcgccga
//
LOCUS       DASQYP010000075         8666 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_173384, whole genome shotgun sequence.
ACCESSION   DASQYP010000075 DASQYP010000000
VERSION     DASQYP010000075.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 8666)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8666)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8666
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_173384"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            354..1346
                     /locus_tag="VE783_02475"
     CDS             354..1346
                     /locus_tag="VE783_02475"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52286.1"
                     /translation="MVSRYLTLLCVVCVLSVAGSGQSGVCKANEFPVGIINAKGEAFR
                     GLTPASFTAQVGGNRESLTSMSFDEGPRRVVLIVDASRKLSDDTRKAERLLVETLLNS
                     ARKEDSYALIVARGAEQTVKFGEDRKSIVDAVPLEPSGKSTKGGVLDAVMQGITLLGP
                     AQPGDSILVIAADLEGNKTTSARKVTRALHDHRIRMLGLALGPVSAQNYMAGGQTTTS
                     LGLATTTPGVGELTYDTGDQDYYPLTHDSGGIVISAMNGSPQRSYNMKDPKLQQELAY
                     KAQVISNVISTYYRAEVGPVPARVEDLIVLPSDNLRKQFPQMFLLYPHQVGPCS"
     gene            1530..2018
                     /locus_tag="VE783_02480"
     CDS             1530..2018
                     /locus_tag="VE783_02480"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52287.1"
                     /translation="MRRKLGYLLSVSFLGAVCAAYGQNPTPNPDVKEDRKDLRQDRRD
                     VKKDNRDIQADKKDVRQDRADIRGDKKDIRHDEADMAKDRRELHQDVKKGDTADAQKE
                     RADIRKDQRDLNKDHKDVRSDRRDVHRDEKDLHQDRKDRRQDRRDVRHDKRDLHRDKK
                     AS"
     gene            2145..3038
                     /locus_tag="VE783_02485"
     CDS             2145..3038
                     /locus_tag="VE783_02485"
                     /inference="COORDINATES: protein motif:HMM:NF024853.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin domain-containing protein"
                     /protein_id="HYX52288.1"
                     /translation="MKLLTAFLLLCCASLVFAQTKPLPGDVQRKIERQVRASTEAPPD
                     AQVTIGQRTTSKFTGYDNLPVTIEAQGQKRTLNFLIDQNATKLIYMTEFDLSEDLYAK
                     NMRSIDLSGRPFRGAENAPVTIAVYDDFQCPFCAKMYVTMVNEVMLRYHDRVKLVMKD
                     YPILDAHPWAMRAAVDALCLAQQASEAYWQFSDYVHTHQQDVTNKVKAGGGTDLRAVD
                     AIASDIGQKRNLPAEPLQACLAKQDEGKVRASMQEGKTLGVDATPTLFVNGQEFAGIM
                     TPESFREMVDRALQESAAAKK"
     gene            3339..3575
                     /locus_tag="VE783_02490"
     CDS             3339..3575
                     /locus_tag="VE783_02490"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52289.1"
                     /translation="MTITFSTAVRCLAALLSLVAVVLASGCAGASAARGYTFHANNIT
                     RVSYDPKLCTQLPDGAFRCKNVVFTVNAITPEQK"
     gene            complement(3698..4069)
                     /locus_tag="VE783_02495"
     CDS             complement(3698..4069)
                     /locus_tag="VE783_02495"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52290.1"
                     /translation="MKPLSVVIAQPSGQRRESLAQALTNHFRVVNSVDSVQALRHAIA
                     RNRADVAVVDLELSSLPDVIQLRQEFPATKVVCTHRLADEKMWAQALSAGAADCCYDS
                     DVRAIVLAASTPRPMAHAHAA"
     gene            complement(4175..4405)
                     /gene="xseB"
                     /locus_tag="VE783_02500"
     CDS             complement(4175..4405)
                     /gene="xseB"
                     /locus_tag="VE783_02500"
                     /EC_number="3.1.11.6"
                     /inference="COORDINATES: protein motif:HMM:NF002140.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009318 - exodeoxyribonuclease VII
                     complex [Evidence IEA];
                     GO_function: GO:0008855 - exodeoxyribonuclease VII
                     activity [Evidence IEA];
                     GO_process: GO:0006308 - DNA catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease VII small subunit"
                     /protein_id="HYX52291.1"
                     /translation="MPKFEDCLQRLEKIVNELETGNVPLEQALKLFEEGMQLSSSCRK
                     ELEEAEGKVEILLKQNGKLQPEAYESPASARK"
     gene            complement(4584..6464)
                     /locus_tag="VE783_02505"
     CDS             complement(4584..6464)
                     /locus_tag="VE783_02505"
                     /EC_number="1.5.1.20"
                     /EC_number="2.1.1.10"
                     /inference="COORDINATES: protein motif:HMM:NF006396.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional homocysteine
                     S-methyltransferase/methylenetetrahydrofolate reductase"
                     /protein_id="HYX52292.1"
                     /translation="MAKDLLSRLKQAPVLCDGAMGTLLYAKGVFINKCYDELNLTQPE
                     LIRGIHQEYLTAGAEVIETNTFGGNSFRLARHGLVDKGREINLRGAQMAREAADAYNV
                     KMGCDVLVAGSVGPLGIRIEPLGKTSREEARESFRQQIAALAEGGIDIVMLETFGYLQ
                     ELHQAILAARDVNPALPVVAQVTIDEDGNCLDGASPETFVAKLEEWGADVIGCNCSVG
                     PVAMLEAIERIRRLTTKPLAAQPNAGIPRNIEGRNIYLCSPEYMASYARKFVSAGVAL
                     VGGCCGTTPEHVKSMKSALRMTDAKGRTPSFQVIGEKKRDSAVAPPPLAQRSELGRKL
                     AAGEFVTMVEIVPPKGIDYRKEVEGAKFLKAAGIDAINIPDSPRASARMSNLALCTLV
                     QQQAGIETVLHFTCRDRNVLSMQSELLGCYTIGMHNLICITGDPPKMGNYPDATAVFD
                     VDAIGLVNIVHNLNYGLDIGGNPIGSGTKFVIGVGANPGIVNIEEEIRRFEYKVEAGA
                     DYAVTQPVFDVALLEHFLRRIEHHRIPVLAGIWPLTSVRNAEFMKNELRVSVPDHIIE
                     RMAKAASPEAARAEGIQIAREMLRQVRGLVQGAQVAAPLGRYQSAIEVLDGISGSAAA
                     VG"
     gene            6919..8148
                     /locus_tag="VE783_02510"
     CDS             6919..8148
                     /locus_tag="VE783_02510"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52293.1"
                     /translation="MRLTGFVLGALVTALCIAGCGSSSSSSNTVQLSGIKKRVLISNQ
                     QQNALDMFDGNKDALGKTFTATTPGKMVHAGIFTAILSLSPSISFFDQTKEQVSASVQ
                     LSDVPTDVVMDSDGGIAWVAERNASVVQVVGSINGNIAVSIPIPSASRLAMGPNFTRL
                     LAFSDDPQHNATNPNGFFVIDEATNVVTPIALAPGDQPIFGLFNGSDNAIFVLNCGTG
                     CGGTAPPSVVRIDLTNLAAPGISAHIPVNGATTAILNGSTLYVAGTAPGAANGTLQAI
                     DTGTLAVSPAVTLLPNGIQGPMAITSNKKLFVGSQGCTVSPIAGTNQVVGCLAILDVS
                     SGTPPASGFPATFPAENAFRQNFDVTGLQPISGRNTVYVIQGGELDFFDQTTNALSSA
                     TVIDIVGTAIGVVQIDP"
     gene            complement(8412..>8666)
                     /locus_tag="VE783_02515"
     CDS             complement(8412..>8666)
                     /locus_tag="VE783_02515"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52294.1"
                     /translation="MAVQLGFLVLRVQKGFPDVEALRQVSKDHSELQKIEVEFLSRNF
                     LDHGHDPKKCDLIVCWINNWPDCPVEVMELSKMVEMGGIG"
BASE COUNT         1862 a         2593 c         2347 g         1864 t
ORIGIN      
        1 cagcgattct gaaaaagccc tgaattccag ccttgacgca atcggccggg gggcagtgaa
       61 cgggtggcca atgtccactt gggcatgccg gtttcggtga gagcagcttt cattaagact
      121 ttcgctcgga cggagtcaag cattccaccg agagaagcgc accgctggtg agaggctccc
      181 tcgcgtcaat tgtgaagaaa tgttgagggc gcacccgctt actggatcgc ctatggaggg
      241 tctaagtttt gcggcgaagc gagaaaagtt gctggccgat aactacgatg gccggatatg
      301 attgagctct caattccaat ttagtcgtgt cggcaaacat aaaaggagtc tgaatggtat
      361 cccgttatct cacgctgctt tgcgtagttt gcgttctatc ggttgctgga tctggccaga
      421 gcggcgtatg taaagccaat gagtttcctg taggaatcat caatgccaag ggcgaggcgt
      481 ttcgcggact tactcccgca agctttacag cgcaggtagg cggcaatcgc gagagtctaa
      541 cttcaatgtc attcgatgag gggccccggc gagtggtgct gattgtggat gccagtagaa
      601 agctttccga cgatacgcgt aaagcggaac gcctgctggt ggaaaccttg ttgaattcag
      661 cgcgtaagga agacagctac gcgctaatag tggctcgagg cgctgagcag accgtcaagt
      721 tcggagaaga tcgtaagtca atcgttgacg ctgttccgct ggaaccttcc gggaaaagca
      781 cgaaaggggg cgttctggat gcggtgatgc aaggcattac attgttggga cctgctcagc
      841 ctggggactc gattctggtg attgcggccg atctggaagg aaacaagacg acgagtgcaa
      901 gaaaggtaac cagggccctc catgatcatc gcatcaggat gttaggtctg gcattaggcc
      961 cggtgagcgc ccaaaactac atggctggag ggcagacaac cacctcactt gggctggcca
     1021 ccaccactcc gggcgtagga gaactgactt acgataccgg agatcaggac tattatcctt
     1081 tgacgcacga cagcggtgga attgtgattt ccgccatgaa tggcagcccg caacgcagct
     1141 ataacatgaa agaccctaag ctgcagcagg aactggcgta caaagcgcaa gtgatatcga
     1201 atgtaatcag cacgtactac cgcgccgagg ttggacctgt gcccgcgcgg gtagaagacc
     1261 tgatcgtgct accttctgat aacctgcgaa agcagtttcc ccagatgttc ctgttgtatc
     1321 cacaccaggt ggggccctgc tcctgaactt ttccagcctg acgcgccgct ccagcaggag
     1381 gcggcgcgtt ctgctttttg gttataaata cgcggaacca aagtaacttc cacttggcgg
     1441 cgacaaagca gcaacttctc tggcaggccg ggtttgtagc tgacaacgca gcttcacaaa
     1501 ccttggaggg aaaaggagct tttgctgtta tgcgacgaaa attaggttat ctgctgagcg
     1561 tttcattttt gggggcggtt tgcgcggctt acgggcagaa ccctacgccg aacccggatg
     1621 taaaagaaga ccgcaaagat ttgcgccagg accggcgcga tgtgaaaaaa gacaatcgcg
     1681 atattcaggc cgacaaaaag gacgtgcggc aggaccgggc cgacatccgc ggtgataaaa
     1741 aagacattcg ccacgatgag gccgacatgg ccaaagaccg ccgcgaactt catcaggacg
     1801 tgaagaaagg cgacacggcc gatgcgcaaa aggagcgcgc tgatattcgc aaagatcagc
     1861 gcgacctgaa caaggaccat aaagacgtgc gttctgaccg gcgcgacgtt catcgggacg
     1921 aaaaagacct gcaccaggac cgcaaggacc gcaggcagga ccgccgcgac gtcaggcacg
     1981 acaagcgcga cctgcatcgc gacaaaaagg ccagctaatc agacttctct gggaaatggc
     2041 tccggcatag ctttggctgg ggccactcct gttccaaaaa cctattttgg gccgctccgg
     2101 tttcgggcaa ggccactccg gttataaaat aagccaactt tcttatgaag ctccttacgg
     2161 cctttctcct gctatgttgt gcatccctgg tatttgcgca gacgaaacct ctgccgggtg
     2221 acgttcaacg gaaaattgag cggcaagtgc gcgcctcaac ggaagcgccg ccggacgcgc
     2281 aggtcaccat tggccagcgc acgacgagca agttcaccgg ttatgacaac ctgccggtaa
     2341 cgattgaagc gcaagggcaa aagaggacgc tcaacttcct gattgaccag aatgcgacca
     2401 agctgatcta catgacggag ttcgatcttt cagaagatct gtatgcaaag aacatgcgca
     2461 gcatcgatct cagcgggcgc cccttccgcg gagcggagaa cgcgccggtg acgatcgccg
     2521 tctatgacga ttttcagtgt cccttctgcg cgaagatgta cgtgaccatg gtgaatgaag
     2581 tgatgcttcg ctatcatgac cgcgtgaagc tggtgatgaa ggactatccg atccttgacg
     2641 ctcatccctg ggcgatgcgc gcggcagttg acgcgctctg cctggcacag caggcgtccg
     2701 aagcctattg gcagttttct gattacgtcc atacccatca gcaggacgta acgaacaagg
     2761 tgaaagcagg cggtgggact gacctgagag cggtggacgc cattgccagc gatatcggcc
     2821 aaaaacgcaa tttgccggcg gagccgcttc aggcctgcct ggcgaagcag gatgaaggca
     2881 aggttcgggc ttccatgcaa gaaggcaaaa cgctgggcgt ggatgcgaca cccaccctgt
     2941 tcgtgaacgg acaagagttc gcgggaatca tgacaccgga atccttccga gagatggtgg
     3001 accgagcgct ccaggagagc gcggcagcga aaaagtaagt gctcgtcgca cggccgggtc
     3061 gttgaagtta cgccggttga aatgaccgct tgcctctctt acgcaggcac gacgacgaaa
     3121 gtaacagcat cagactgatc aacctgctgc gttccccatg catgcggtgc gcagacccgc
     3181 atgattacta cacaaaatga ctgctaatat tgcgcgatgg gggccaaggg cccgtgtgtc
     3241 gcctgctgta catcgaccaa agtactgtat atgggttcat aagtgttggc gcatgcttcg
     3301 gctcaacgag ggagaacatc cccaggagca gaaagcaaat gacaatcacc ttttccacgg
     3361 ccgttcggtg ccttgccgcc ctgctgagtc tggtggccgt ggtacttgct tcaggatgcg
     3421 cgggcgcgag cgcggccaga ggctacacct tccacgccaa taacatcacc cgggtcagtt
     3481 acgatcccaa gctttgcacg cagcttcccg atggtgcttt ccgctgcaaa aacgttgtgt
     3541 ttaccgtcaa cgcgatcacg ccggagcaga agtaagggaa cactcgatcg cgtacggact
     3601 ttgaagcagc gccgggcttg aaccacaaaa tgagaaaagg agcgaccatg ctgtcgctcc
     3661 tttttctctt tcggacggga ggagacgggt ttggatttca ggcggcgtgt gcgtgagcca
     3721 ttggtcgagg agtactggcg gccagcacaa tcgcgcgcac gtcagaatcg taacaacaat
     3781 cagcggcgcc ggctgagagc gcctgggccc acatcttttc atcggcaagg cgatgcgtgc
     3841 ataccacctt ggtggcagga aactcctgcc gaagttggat gacgtctggc aggctgctga
     3901 gctccaggtc taccacggcg acatcagccc gattacgcgc gattgcatgg cgcagggcct
     3961 ggacgctatc caccgagttc actacacgga aatgattggt aagggcctgg gccagcgatt
     4021 cgcgcctttg tccgctgggc tgggcaataa cgacactgag tggtttcata gagcacatcc
     4081 ttcagaggcg ttaagcgaag acggcttggc cgtatcgaac ttcgcggcga ataacatgct
     4141 gcaggtgcgc cctgcaggcg agagacagga aggtttattt tcgagctgaa gccggacttt
     4201 cataagcctc aggctgcagc ttgccgttct gcttcaggag aatctcaacc ttaccttccg
     4261 cttcttccag ttctttccgg caggaggaag atagctgcat gccttcttca aaaagtttta
     4321 gcgcctgctc cagcgggacg tttcccgttt cgagctcatt cactattttt tccagacgtt
     4381 gaagacagtc ttcaaactta ggcaagagtc agaaactcca agttcattct accgctgatt
     4441 gaaagcagcg gttgtggaaa atcgcagaaa aaaggacaag ggcaggactg ctgaatttcc
     4501 gttcagctca cagatgtcct gctgttttaa aaatgttcta agctgacgag cgcggctgaa
     4561 cgggccgacg ttggtgaggg tggttagccg actgctgcgg ctgatccgga gatgccgtcg
     4621 agcacttcaa tggccgactg ataccgtccg agcggggccg ccacctgggc gccctgcacc
     4681 agccctcgga cctggcgaag catctcgcga gcaatctgga tgccttcggc ccgggcggct
     4741 tccggcgagg cagccttggc catgcgctcg atgatgtggt ccggcacgga gacgcgaagc
     4801 tcgtttttca tgaactcggc gttgcgaacg ctggtgagcg gccagatacc ggctaggacc
     4861 ggaatccggt gatgctcgat tcggcgaaga aagtgctcca gcagggcgac gtcgaagacc
     4921 ggttgcgtca cggcgtagtc agcgccagct tccaccttgt attcgaagcg gcggatctcc
     4981 tcctcaatat tgacgatccc cgggttcgcc ccaacgccga ttacgaactt ggtcccgctt
     5041 ccaatcgggt tgcctcctat gtccagtcca tagttcaggt tatggacaat gtttaccaac
     5101 ccaatcgcgt caacatcgaa gaccgccgtg gcatcaggat aattgcccat tttgggggga
     5161 tcacccgtga tacagatcag gttatgcatg ccgatggtgt agcagcccag cagttcgctc
     5221 tgcatgctga ggacgttgcg gtcgcggcag gtaaagtgaa gcaccgtttc gatgcccgcc
     5281 tgctgctgga ccagcgtgca cagcgccagg ttgctcatgc gcgccgacgc cctcgggcta
     5341 tccggaatat tgatagcgtc aattcccgcg gctttcagga actttgcgcc ttccacttcc
     5401 ttgcgatagt caatcccttt cgggggaaca atctccacca tggtcacaaa ttcgccggcc
     5461 gccagcttcc ttcccagctc cgacctctgc gccagcggcg gcggcgcaac cgcagagtcc
     5521 ctcttcttct ccccgatcac ctgaaacgac ggcgtacgcc cctttgcgtc cgtcatccgc
     5581 agcgccgact tcatgctctt cacatgttcc ggcgtggtgc cgcagcagcc gcccaccagc
     5641 gccacgcccg cgctcacgaa cttacgcgcg tagctggcca tatattccgg cgagcacaaa
     5701 tagatgttgc ggccctcaat attcctggga atgcccgcgt tcggctgtgc ggctagcggc
     5761 ttggtggtga gccggcgtat gcgttcaatg gcttccaaca tggccaccgg accaacactg
     5821 cagttgcagc caatcacgtc cgcgccccac tcctccagct tcgccacaaa cgtttccgga
     5881 ctcgcgccat ccaggcagtt gccgtcttca tcaatcgtca cctgcgccac taccggcagc
     5941 gccgggttca cgtctctggc cgccagaatc gcctgatgca gctcctgcag atacccaaac
     6001 gtctccagca tcacaatgtc gatgccgccc tcagccagcg cggcaatctg ctgccggaag
     6061 gactcccgcg cctcctcccg cgacgttttg cccagcggct caatccgtat tcccagcggc
     6121 cccacggaac cggccaccag aacgtcgcag cccatcttca cgttgtaggc gtccgctgct
     6181 tcgcgcgcca tctgcgcccc gcgcaagttg atctcacgcc ctttatccac cagcccgtgc
     6241 cgcgccagcc gaaaagagtt gccgccgaac gtgttcgtct caataacctc cgcgcccgcc
     6301 gtcaggtact cctggtggat cccgcggatc agctccggct gcgtcaggtt caactcgtca
     6361 tagcatttat taataaacac gcctttggca tagagcagcg tgcccatggc tccatcgcac
     6421 aacaccggag cctgcttcaa tcgggataga aggtcctttg ccatcgctct caatctttca
     6481 ggatatcgca aatctttgcc gggccgctgt aatcaccatt aatcagtcga tctcagcgtt
     6541 aatcagtcag ctccgccaca tcagcggtaa ccctcatcag cggtaaagcc tccgttcctc
     6601 gttgtcctga tcagtgttct gagtgttcat ctggggcaaa actgcttttg cttttccgat
     6661 tccggcgatg gcccgttctc ccgatacccc cctattcccg cgttgttctt ccttctgatc
     6721 agtgttctga gtgttaatct gtggcaaaac tgcttttggt tttcccgatt acggcgatta
     6781 cggcgatcac ccgatccagc cgtccccatc tttttctcgc aaaaatccct cactcccacg
     6841 ttctctccct cgggagaggt gtctgatccg ctctgttata atcgccgttt catctctaac
     6901 atcaggtata tcaatcgaat gcgtctaacc gggttcgtct tgggagcact tgtcaccgca
     6961 ctttgcatag ccggatgcgg ctccagcagt tccagcagta acaccgttca gctctccggg
     7021 atcaagaagc gtgtgctgat ctccaatcag caacagaacg cgcttgacat gtttgacggc
     7081 aataaagacg cactgggcaa gaccttcacc gccaccactc ccggcaaaat ggtccatgcc
     7141 ggcatcttca ccgccattct cagcttaagt ccatccattt cgttctttga ccagaccaag
     7201 gagcaggtca gcgcttctgt ccagctttct gacgtgccaa ctgacgtggt catggactcc
     7261 gacggcggca tcgcatgggt ggccgagcgc aacgctagcg tggtccaggt ggtgggctcc
     7321 atcaatggca atattgccgt ctcgatacct attcccagcg ccagccggct ggccatgggt
     7381 cccaacttca cgcgccttct cgctttcagt gacgatccgc agcacaacgc caccaatccc
     7441 aacggcttct tcgtcattga cgaggccact aacgtcgtca cgcccatcgc tctcgccccc
     7501 ggagaccagc ccatctttgg cctgttcaat ggcagtgata acgcgatctt tgttctcaac
     7561 tgcggcacag gttgtggagg cacggcgccg cctagcgtgg ttcgtattga ccttaccaat
     7621 cttgcggcgc cgggcatcag cgcgcatatc ccggtcaacg gcgccaccac cgccattctc
     7681 aatggttcca cgctttacgt ggctggaacc gctcccggcg cagccaacgg aacgcttcag
     7741 gccattgata ccggcacact cgccgtttcc ccagcagtta ctctcctgcc caacggcatt
     7801 caggggccca tggccattac cagcaataaa aagctgttcg tcggctccca gggctgcacc
     7861 gtttctccga tcgccggcac caatcaggtg gtgggctgcc tcgccatcct cgacgtcagc
     7921 tccggaacgc ctccagccag cggcttcccc gcaacttttc cggctgaaaa cgccttccgt
     7981 cagaactttg acgtcaccgg cctccagccc atctccggac ggaacaccgt ttacgtcatc
     8041 cagggcggcg aactcgactt cttcgaccag accaccaacg ccctctcctc cgccacggta
     8101 atcgacatcg tcggtaccgc catcggcgta gtgcagatcg atccgtagtt gtggtttatc
     8161 ccgagcggag caagggaacc ctacccgctc ggtgagtgcc ttccgcgata gttcgcggct
     8221 ggctctgttg aatctcctct cagtggcaat tgttctcctg ctctgcgcgt aataggtttt
     8281 tgattcgcgc cgtttcgcgt tcgttcgcgg ctcaacttcc tgccatctgc gttcatctgc
     8341 gttgatctgc ggcaaactgc ttttgctttt cccgattccg gcgattacgc gcgattacgg
     8401 cgatcccccg atcacccgat tccccccatc tccaccatct tgctcagctc catcacctcc
     8461 accggacaat ccggccagtt attgatccag cacacaatca ggtcgcattt ctttggatca
     8521 tgcccatggt ccaggaaatt cctgctcaaa aattccactt caatcttctg caactcgctg
     8581 tggtctttgc tcacctgccg caatgcttcc acgtcgggaa agcctttctg cacccgcagc
     8641 accaggaatc ccagctgtac cgccat
//
LOCUS       DASQYP010000076         4332 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_235486, whole genome shotgun sequence.
ACCESSION   DASQYP010000076 DASQYP010000000
VERSION     DASQYP010000076.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 4332)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4332)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4332
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_235486"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..412
                     /locus_tag="VE783_02520"
     CDS             <1..412
                     /locus_tag="VE783_02520"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52295.1"
                     /translation="TAGVLNTSTAEPPHSGTHDAWLDGYGTTHTDTASQTVSIPAGKT
                     SATLTFWLHIDTAETTTTTAFDTLRVQVLNTSGTVLATLGTFSNLNHATGYQQHSFSM
                     NSFIGQTVIIRFTGTEDTSLQTSFVLDDVNLNVQ"
     gene            675..1154
                     /gene="rplU"
                     /locus_tag="VE783_02525"
     CDS             675..1154
                     /gene="rplU"
                     /locus_tag="VE783_02525"
                     /inference="COORDINATES: protein motif:HMM:NF013025.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000311 - plastid large ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L21"
                     /protein_id="HYX52296.1"
                     /translation="MYAVIRAGGKQYRVAPGDIVKIEKLPAADGDTVEFNDVLAISAQ
                     DGQIGPGVGAMVSGEVMEGGRADKILVFHFKRKKQYKKIYGHRQPFTAVRITEIAFDG
                     QKFSAPELPARKPKKVKAEAAGEESAAAPRAAAGKKSAAKKPAKKAAKKSSAKGKKK"
     gene            1223..1492
                     /gene="rpmA"
                     /locus_tag="VE783_02530"
     CDS             1223..1492
                     /gene="rpmA"
                     /locus_tag="VE783_02530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002513859.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L27"
                     /protein_id="HYX52297.1"
                     /translation="MAHKKGLGSSRNGRDSNAQRLGVKAFGGQLVPGGTIIVRQRGTR
                     IKPGANVGRGKDDTLFAKITGTIKFVDKGTSGRYVIVEPAEAAKA"
     gene            1599..1805
                     /locus_tag="VE783_02535"
     CDS             1599..1805
                     /locus_tag="VE783_02535"
                     /inference="COORDINATES: protein motif:HMM:NF016167.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF433 domain-containing protein"
                     /protein_id="HYX52298.1"
                     /translation="MTKPAQIVSDPNILSGEPVLRGTRVPFKSLIDYLSHGHTLEELL
                     DDFPSVAREAALAALEEQDTGGSR"
     gene            1802..2659
                     /locus_tag="VE783_02540"
     CDS             1802..2659
                     /locus_tag="VE783_02540"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR00027.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HYX52299.1"
                     /translation="MTQSSDRLIRNISDTALWVAIYRAREAERPDAVFHDPYARRLAG
                     ERGEQIAQHMESRVSHAWPYIARTFRFDQMIREQVQQGTDMVINLACGLDTRPYWHNL
                     PAALQWVEVDLPGIIDYKEEVMRNEKPRCQLQRVRLDLSEVPARQKLFQELGAKAKRA
                     LIISEGLLVYLTAEEVLALARDLAAQPSFHDWGIDLCSPGLLKMLQKELPALSQAGSP
                     LKFGPPEGPAFFTQAGWKPAQVFSMIKTAAKLQRLPSLMLKIMALLPESSGKQGSRPW
                     GGVIHLTLT"
     gene            2690..3151
                     /locus_tag="VE783_02545"
     CDS             2690..3151
                     /locus_tag="VE783_02545"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HYX52300.1"
                     /translation="MAVKAQPEQYHTITPYLYVRGGAKALDYYKAAFGAVEIFRMAMP
                     DGRIGHCEFKIGDSIVMMADEFPEGDVVGPQTLGNSSVGITLYIPDVDAVTNQAVSLG
                     ATIIKPLANQFYGDRTATLRDPFGHKWTIATHVEDVTPEEMERRMAAMSKK"
     gene            3729..4250
                     /locus_tag="VE783_02550"
     CDS             3729..4250
                     /locus_tag="VE783_02550"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52301.1"
                     /translation="MPGAAESLLIITGSMGSGKSSVLAEASDILTLRKAPHAAIDLDA
                     LSLGHFRRSDDSDQLMYANLQSVWQNFAAAGITRLLLARALETCEELELTRSAVSAKH
                     VTICRLTAEIATMEQRVRQRESGILQQQFVERVSVLNALIDRAALEDFCVANQDRPIH
                     EVATEMLSRAGWL"
BASE COUNT          984 a         1296 c         1209 g          843 t
ORIGIN      
        1 caccgccggc gtgctgaaca cctccacggc cgaaccgccg cacagtggta cgcacgatgc
       61 ctggcttgat ggctacggca ccacccacac tgataccgct tctcagaccg tcagcattcc
      121 ggcgggcaag accagcgcca cgctgacctt ctggctgcac attgacaccg cggagaccac
      181 taccaccacg gcgtttgaca ccctgcgcgt gcaggtgctc aacaccagcg gcacggtgct
      241 ggccactctg gggacgttct ccaacctgaa ccatgcaact ggctaccagc agcattcgtt
      301 cagcatgaac tccttcatcg gccagacggt gatcatccgc ttcaccggaa ccgaagacac
      361 gagtctgcaa acctcattcg tgcttgacga cgtgaacctg aacgtccaat aacgagtgac
      421 ctcaaaaggg aacgccgggg ccgttcgcgg ccccggcgtt tctttgttcc ccgaaagtaa
      481 cctgctgccg caacccgctc ccggttgacc ctatcctgct gatcacgtta aaattacagg
      541 gtttgccaga ttagccagtt cctgcctgtc tgagctgaag ctcaaggctc gagcaaacct
      601 aagcaaattc agcaatcctc aagtttattt aagtcctttc ggtaaagcag gttgaaagga
      661 cgctggagag agttatgtac gcggttattc gcgccggggg gaaacagtac cgtgtggctc
      721 ccggggacat cgtaaagatt gagaagctgc ccgccgcaga cggcgacacc gtggaattca
      781 acgacgtgct ggccatctcg gcccaggacg gccagatcgg ccccggcgtg ggcgcaatgg
      841 taagcggcga ggtcatggaa ggcggccgcg cggacaagat cctggtcttc cacttcaagc
      901 gcaaaaagca atataagaag atctacggcc accggcagcc gttcaccgcc gtccggatca
      961 ccgagattgc gttcgacgga cagaagttct ccgcgcctga gctccccgcc cgcaagccca
     1021 aaaaggtaaa ggccgaagcc gctggtgaag aatcagccgc ggcgccgaga gcagcggcag
     1081 gcaagaaatc ggcggcaaaa aagccagcga agaaggcagc caagaagtct tccgccaagg
     1141 gcaagaagaa gtaacagcgg tagcgcgtca ggcgcacgca agcaaagttt tgggctccgg
     1201 cccgcaatca aggatttacg tcatggcaca taaaaaaggt ttaggcagtt ccagaaacgg
     1261 gcgcgacagt aatgcacagc gcctgggagt aaaagcattc ggcggacagc tcgtccccgg
     1321 cggcaccatc atcgtgcgcc aacgcggcac ccgcatcaaa cccggcgcaa acgtgggccg
     1381 cggcaaagat gacacgctct tcgccaagat cacaggcact attaagtttg tggacaaagg
     1441 cacgagcggc cgttacgtga tcgtggagcc cgccgaggct gccaaggcgt aaacgccgta
     1501 cgcaagtttg attactggcc ctgcgtgcag cggggccttt tccatttttg caagtagctc
     1561 agggcaaacc cgcgatgacg ctggcgtaaa attgcgtcgt gaccaagccg gcacagatcg
     1621 tgagcgaccc caatatcctg agcggagagc cggtccttcg cggaactcgc gttccgttca
     1681 aatctctcat cgactacctg agccacgggc acactctcga agagcttttg gatgattttc
     1741 cttccgtggc ccgcgaagca gccttggcag ctctcgaaga gcaagacact ggaggctcgc
     1801 gatgactcag agcagcgatc gcctgatccg caacatctct gacaccgcgc tctgggtcgc
     1861 catctaccgt gcccgcgaag ccgagcgccc ggatgcggtc tttcatgatc cttatgcccg
     1921 ccgccttgcg ggtgaacgcg gcgagcagat tgcccagcac atggaatcgc gcgtctcgca
     1981 cgcctggccg tacattgcgc ggactttccg ctttgaccag atgatccgcg agcaggtgca
     2041 gcagggcact gacatggtga tcaaccttgc ctgcggcctc gatacgcgcc cgtactggca
     2101 caatctacct gccgcgttgc aatgggtgga agtcgacctg cctggcatca tcgattacaa
     2161 ggaagaagtc atgcgcaatg agaagccgcg ctgccagctc cagcgcgtgc ggctcgattt
     2221 gtcagaggtg ccggcgcggc agaagctgtt ccaggagctc ggcgcaaaag ccaaacgcgc
     2281 gctcatcatt agtgaaggtc tgctggtcta tctcacagcc gaagaagtgc tggctctggc
     2341 gcgcgatctc gccgcgcagc ccagcttcca cgactggggc atcgatctct gctcgcccgg
     2401 actattgaag atgctgcaaa aagaattacc ggccctcagc caggcaggct cgccgctcaa
     2461 gtttggtccg ccggaaggcc cggccttctt cactcaagcg ggctggaagc cggcgcaggt
     2521 cttttccatg atcaagaccg cagccaaact ccaacggctt ccttccctta tgctgaagat
     2581 catggcacta ttgccggagt caagcggcaa acagggatcg cgaccctggg gcggagtcat
     2641 ccacctaacc ctaacctaag agatttttat cgaaagcgag aacgatgcca tggcagtgaa
     2701 agcacaacct gagcagtacc acaccatcac gccttatctc tatgtaagag gcggcgccaa
     2761 agctcttgat tactataaag ccgccttcgg cgcagttgag atcttccgta tggccatgcc
     2821 cgatggccgc atcggccact gtgaattcaa aatcggcgat tccattgtga tgatggcgga
     2881 tgaatttcct gaaggcgacg tggtgggacc gcagaccctt ggcaactcca gcgtcggtat
     2941 cactctctat atcccggacg tggacgcagt cacgaaccaa gccgtgagcc tgggcgcaac
     3001 tatcatcaag ccactcgcca accagttcta tggcgaccgc accgccaccc tgcgcgatcc
     3061 gtttggccac aaatggacta tcgccacgca cgttgaggac gtaactccgg aagagatgga
     3121 acggcgcatg gccgccatga gcaagaaata ggttgtaacg ttgcctgcta gcacgagtga
     3181 aaacggctgt tatgaccagc tggaacaggc tcgaactaat tgcgttagct acccaatacg
     3241 cgtagcatca aagcaaactg gaggtgcggt atgcagcacc gaattggcct ctgggcacta
     3301 acgggcttca tagttgcgag tatttgggtg attctgagct tcgcgattcc catatcgccg
     3361 cagccgaccc tgtggggact cgctcaattg acatgcccga ttcttccgat cagtctcgcg
     3421 tttcatttcg gagtgaaatg gtactggttt gttgtctcaa acgtcgctgg gtatgcgctg
     3481 attggcctca tctttgagag tgtgcggttc gtccgttatc aagtagccgc tcgggtgaaa
     3541 gcataaatcg cgtgggcaac cccctcaaag tgttaaaggt gtccagacaa ccgcagcggc
     3601 ctaaataaat cgtcatcccg agctccgtca gtgaggacgc gcattcttca gcgtccgaat
     3661 aggagcgagg gagtctgtgt ttgcccgata agtaactctg acgatggcct ggtgtatgct
     3721 gcctgattat gccgggcgcc gccgaatcgc tgctgatcat caccggctcc atgggctcgg
     3781 gcaaatcatc tgtgctggcg gaagcctctg acatcctgac gctcaggaaa gccccacacg
     3841 ccgccattga tctggacgcg ctctcgctcg gtcatttccg gcgaagcgac gattcagacc
     3901 agctgatgta tgccaatctt cagagcgtgt ggcagaactt tgccgccgcc ggcatcacca
     3961 ggctcctgct cgcccgcgca ttggaaacct gtgaagaact ggagctgacc cgcagcgcag
     4021 tgtcagccaa acatgtgacg atctgccggc tcacagcaga gatcgccact atggagcagc
     4081 gtgtgcggca gcgggaatca ggaattctcc agcagcagtt cgtcgaacgt gtgagtgttc
     4141 tcaatgcgct gattgatcgt gcggcgctcg aagatttctg tgtcgccaat caagatcgcc
     4201 caattcacga agtcgcaaca gagatgcttt cccgcgccgg ctggctctag ctcccgccgg
     4261 gcctgaatcc cattttcccc ttgtacaatc aaatacataa gcatgtttat tgatcaggca
     4321 atcatcaagg tg
//
LOCUS       DASQYP010000077         2486 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_23735, whole genome shotgun sequence.
ACCESSION   DASQYP010000077 DASQYP010000000
VERSION     DASQYP010000077.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 2486)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2486)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2486
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_23735"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2322)
                     /locus_tag="VE783_02555"
     CDS             complement(<1..2322)
                     /locus_tag="VE783_02555"
                     /inference="COORDINATES: protein motif:HMM:NF024939.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HYX52302.1"
                     /translation="MGLVTGKSGGNKSLAVKPNLLSALRVQTSSYGQVLPIVYGQSRL
                     AGRLLWSGDFAAIPHTSTQKVGGKGLGSGGGNAISNTTYTYQSAVAIALCQGPIQNLH
                     NVWDSKGKLTLLTTSTQFTVPGGGGAFTPPNDGRIFHSSRGVSRGDAFSMSVTDFGSD
                     GTLTLSGTQQTPMVATTGTPAAGQYTVDPVTGAHNFSAADAGKVVTITYSYSFPDSNS
                     NGQPQQKLNITLFPGPRPQTPWTYLTSRHAGQDLGYSGVAYVASSNMDLGESGTLPNL
                     SFEVLGFLPFGAGITDAEPSAIISDLLASPFYGLSGAVPLDTANTLAQYRNFCVANGL
                     FLSPVLDAQKPASEWINDFLSITNAAAVWSEGLLKIVPYGDTTAFGNGAVFIPNTAPI
                     YDLTTNDLLSEVLVKRPSVADVKNSVSIEFVNRANDYNPEVAEDKDEAAIALYGLRKA
                     EAVQAHMITTTTVAKFAANLLRKRSIEVRATFTFKLGWQFNLLEPMDLVTLTVPELGY
                     SKKPVRITAIREDDSGTLEIEAEDFPWGSAAPTLYAQQVPGGFVPQANADPGSANAPI
                     IFEANDRLSLTGNYEIWIGVCGSSPDWGGCSVWLSPDGNSYAQVGRIYGSARMGVLTA
                     SLPAGTDPDTTHTVSVDLTQSGGVLSSGTPADCENFRTLCYLDGELISYQTATLTGPS
                     AYTLGTRLRRGVWGSPNIAHSAGAVFLRLDNADAVFVYEADPTLIGTTLFFKFTPFNK
                     FGLMEQSLAKATAYPFTFNGVFGNSDETPANNAT"
BASE COUNT          491 a          636 c          859 g          500 t
ORIGIN      
        1 ggttgcgttg ttggccggtg tttcatctga gttgccgaag acgccattga aggtgaacgg
       61 atacgcggtg gctttggcca gcgactgctc catcagcccg aacttattga aaggagtgaa
      121 tttgaaaaac agggttgtgc cgatcagcgt gggatcggct tcatagacga agaccgcgtc
      181 ggcgttatcc agccggagaa aaaccgctcc ggcgctgtgc gcgatgttgg gcgagcccca
      241 tacgccgcga cgaagacgcg tgcccagcgt gtaagcagaa ggtccggtga gcgtggctgt
      301 ttgatagctg atgagttcgc catcgagata gcagagggtg cggaagtttt cacagtctgc
      361 cggagtgccg gagctgagga cgccgccgct ctgcgtgaga tcgacggaaa cggtgtgagt
      421 ggtgtctgga tcagtgcctg ccggaagcga tgccgtgagc acgcccatgc gggcgctgcc
      481 atagatgcgg ccgacctgcg cgtagctgtt gccgtcgggc gagagccaga cgctgcagcc
      541 gccccagtct ggcgagctgc cgcagacgcc gatccagatc tcatagttac cggtgaggct
      601 gagacgatca ttggcttcaa agatgatggg cgcgttcgcg ctgcccggat cagcgttggc
      661 ctgcggcacg aagccgccgg gaacctgctg cgcgtaaagc gtgggcgccg ccgagcccca
      721 gggaaaatct tccgcttcaa tctccagcgt gccggaatca tcttcacgga tggcggtgat
      781 gcgcaccggc ttcttgctgt aacccagttc aggcacggtg agcgtgacca gatccatggg
      841 ttcaagcagg ttgaactgcc agccgagctt gaaggtgaag gtggcgcgca cttcaatgga
      901 ccgcttgcgc agcaggttgg cggcgaactt tgccaccgtg gtggtggtaa tcatgtgcgc
      961 ctgcacggct tcagctttgc gaagaccgta aagcgcgatg gcggcctcgt ctttgtcttc
     1021 ggccacctcc gggttgtaat cattggcgcg attgacgaac tcaatggaga cggaattttt
     1081 cacgtctgca accgagggcc gcttgaccaa cacttctgat agcaggtcat tggtggtcag
     1141 gtcgtaaatg ggcgcggtgt tggggatgaa gaccgcgccg ttgccgaacg ccgtggtgtc
     1201 accatacggg acaatcttga gcaggccctc actccagacg gcggccgcgt tggtgatgct
     1261 gagaaaatcg ttgatccatt ccgaggcggg cttttgcgcg tcgagcaccg gcgagaggaa
     1321 gagcccgttg gccacgcaga agttgcggta ctgcgcaagc gtgttggcgg tatcgagcgg
     1381 gacagcgccg gagaggccgt agaaagggct ggcgagcaga tcactgatga tcgccgaggg
     1441 ctctgcgtcc gttatgcctg cgccgaatgg cagaaagccg agcacttcaa agctgagatt
     1501 gggcaaagtt cccgattcgc caaggtccat gttggagctg gccacgtaag ctacgcctga
     1561 atagccaagg tcctggccgg cgtggcggct ggtgagatag gtccagggcg tttgcggccg
     1621 cgggccggga aagagcgtga tgttgagctt ctgctgcggc tgaccgttgg agttggagtc
     1681 ggggaacgag tacgaatacg tgatggtgac gacttttccg gcatcggcgg cggagaagtt
     1741 atgcgcgccg gtaacaggat ccactgtgta ctggcccgca gcgggcgtgc cggtagtcgc
     1801 taccataggc gtttgctggg tgccggaaag ggtgagcgta ccgtcagagc caaaatccgt
     1861 aacggacata ctgaaggcat caccgcggct tacgccgcga gaagagtgga agatgcggcc
     1921 atcgttgggc ggagtgaaag ctccgccacc gcccggcacc gtgaattgcg tggaggtggt
     1981 gagcagcgtg agcttgcctt tgctgtccca cacgttgtgg agattttgaa ttggcccctg
     2041 gcagagagcg atggcgaccg ctgattgata agtataggtc gtgtttgaga tcgcattgcc
     2101 tccgccagag cccaaaccct ttccgccgac tttttgcgtt gatgtatgag ggatcgcggc
     2161 gaaatcgccg gaccagagca ggcggccggc cagacgggat tggccgtaaa cgatgggaag
     2221 cacctggccg taagaagatg tctggacgcg cagcgcggag agcagattgg gttttacggc
     2281 gagagatttg ttgccgccgg atttgccggt gacgaggccc atggtgagct cctggctggt
     2341 agcgaattcg gtatttggtg cttggtgctt ggtaattggt gaggagcaca cgagagtttc
     2401 taagttgata gggatccctc gctcgcgctg gagggcgatg gaggcgtaga actcacagat
     2461 gcgcttcgct cgggacttcg gaaaaa
//
LOCUS       DASQYP010000078         6287 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_277635, whole genome shotgun sequence.
ACCESSION   DASQYP010000078 DASQYP010000000
VERSION     DASQYP010000078.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 6287)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6287)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6287
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_277635"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..266
                     /locus_tag="VE783_02560"
     CDS             <1..266
                     /locus_tag="VE783_02560"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52303.1"
                     /translation="RINDSWNVSAAGDFTRGEGFHSYDNVQSGFMLSYVRPLRRTMGD
                     GPGAVGVDYPLRFSIGVQQQSFYNFPGDVRTSSFRPVAQISLF"
     gene            285..1544
                     /locus_tag="VE783_02565"
     CDS             285..1544
                     /locus_tag="VE783_02565"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012744.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HYX52304.1"
                     /translation="MKICFISTFPPSKVVLNEYGFHVARELQNDPLISLTVLADELSE
                     QEPELPEFDVERCWMMNRFSNHRQILKCLRDIRPDVVWFNLVFSTFGNKETPLAAFSG
                     LTLPAMTRMAGYYTHVTLHHLMDHIDLEDAGVKHKTLFKLAGNMATRMILMANSVSVL
                     LPAYRRTLIDKYRGENIHFRAHGILGARPVYPDFSQRGNPEHRILAFGKWGTYKRCEM
                     LIEAFEEQVAPRVENARLVIAGTNNGNSPGYIEALRDRYSSHPRIEFTGYVEEEQISE
                     LFGSSSFMVMPYTSATGASGVAHLAAQHGVPIICSNIPDFLEMGESEGLAIKFYPVGD
                     KNALAQQMIELLENEQEQHEMAEQNFSAALRLTMPQIIRQYVRAFDRHQRARALEAVS
                     RFRRIPSWVPSRSAIFRASSPRWGNWV"
     gene            complement(1548..2813)
                     /locus_tag="VE783_02570"
     CDS             complement(1548..2813)
                     /locus_tag="VE783_02570"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52305.1"
                     /translation="MNLYRRTVFAVTLAALACLALLTASAQRRKPHKLRATAVVEVTT
                     DRSGVSKATVVPVTILDQGRFNDASIYKAAPEPMALDSGVVYEVQKSGVPIGYVTVTK
                     ATKSGMWTALGKWQTATTVAKAAPSPTPGAVDDRPRLHRGEAGSAPASSTPTPTPTPT
                     PTPRIGLPDERPRIHRPGEPNPMPSATPLPPLTLLLVAQEPQDSDRPVLRRRTESPAP
                     TNTPSPQPPTNAPAPSQITALAPGTQTFAGVSDNETYDTRSYEFPWKAGEKEQMEAKL
                     IKLAQAQIPGADQQHEWSFKTLAIRSFDLDMSNEAVMVLTAEAPGAYMTANTKSTPGK
                     FVSRYITLIARVDFDGVPQRLAVSVTDSSRLDVAPRLELIDAVDVDGDGYAELLFREY
                     GFDDKGFIVYGVGRSTVTKVFEGASEPIK"
     gene            2838..3290
                     /gene="bcp"
                     /locus_tag="VE783_02575"
     CDS             2838..3290
                     /gene="bcp"
                     /locus_tag="VE783_02575"
                     /EC_number="1.11.1.24"
                     /inference="COORDINATES: protein motif:HMM:NF020123.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016209 - antioxidant activity [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_except=(pos:2964..2966,aa:Sec)
                     /transl_table=11
                     /product="thioredoxin-dependent thiol peroxidase"
                     /protein_id="HYX52306.1"
                     /translation="MQVNDKAPEFSLANEDGKTVALKDYRGKNVVLFFYPKADTPGUT
                     IEACGFRDAFQKLQKAGATVFGISADKPSAQKKFREKHDLPYSLLADEDKIIAKKYDV
                     LKEKSTYGRKYVGIERTTFIICPEGKVSAVLTGLKPDEHAEAALKALK"
     gene            complement(3338..3886)
                     /locus_tag="VE783_02580"
     CDS             complement(3338..3886)
                     /locus_tag="VE783_02580"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52307.1"
                     /translation="MRNRNIGIVGLLLAVAANAAIAEKIPSGTHVMARVSHTLSSASA
                     HQGQTWTGSLTRDITEHGKVIARTGDPVTGKVTYVKPSGRLHAPGEISIRLTSVNGEP
                     VSTNRVSRKGASHTKSNAAKIGGGAAGGAIIGGLVGGGKGAAIGSAAGAGAGTAGAAA
                     TGKREAVIPAESVYTFTVTGAR"
     gene            4003..5823
                     /locus_tag="VE783_02585"
     CDS             4003..5823
                     /locus_tag="VE783_02585"
                     /inference="COORDINATES: protein motif:HMM:NF017745.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF885 domain-containing protein"
                     /protein_id="HYX52308.1"
                     /translation="MRWCTLLIFLSSVLVHGQRSTPKNSTPGRALHALFDSEWDYEMQ
                     QSPEWASTLGDRRWNDRWHDASIKAIEARHQHSLQVLGRLKQIDRTRLDAKDEFNYDL
                     FKKSYEDDVEGYKFRRFLVPLNQRGGIQTQDELTENLRFETVKDYEDWIDRMRAFPAL
                     MDQTIALMREGAKEHMVHPKVIMQRIPAQIDKQIVSDPEKSGFFKPFLRYPASISSAD
                     QKRLSDAARQAVEQQIVPSFKKLKEFFTTEYLPACFDQVGVWQVPHGDELYAYDVRHY
                     TTTNLTPDQVHEIGLKEVARIGAEMDGIMAKTGFKGSKQEFFNYLRTDPKFFYKTPED
                     LLEAYKATAKTIDPNLVKVFRTLPREPYGVRPIPDVAAPDTTAAYYSEGAADGSRAGT
                     YYVNLYKPDTRPKWEMMALTLHESVPGHHLQIARAHELGEMPKFRRFGSYTAFVEGWG
                     LYGESLGEDMGLYDDPYSKFGQLTYEMWRAVRLVVDTGIHAKHWTREQAINFFMENAP
                     KAELDIVNEIDRYIAWPGQALAYKIGELKIKELRARASQQLGAGFDLKGFHDIVLGSG
                     AVPLDILERNVDAWIAEQQKEQKTAVSKPAKPEAGGAAAH"
     gene            5858..>6287
                     /locus_tag="VE783_02590"
     CDS             5858..>6287
                     /locus_tag="VE783_02590"
                     /inference="COORDINATES: protein motif:HMM:NF013884.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyltransferase family protein"
                     /protein_id="HYX52309.1"
                     /translation="MSAAAPALGNAVPSRSFERFYRPELDALRFFAFFGVFVFHAAPH
                     ERAFYDAAQAPHWLSSFLISSFGAGAYGVDLFFALSAYLITSLLLREREHLGEVDVRG
                     FYVRRILRIWPLYLSFLLFAAAVGWVFPSQRIEGRYLLGFT"
BASE COUNT         1322 a         1782 c         1867 g         1316 t
ORIGIN      
        1 accgcatcaa tgattcttgg aacgtcagcg cggcgggaga cttcacgcgc ggtgaagggt
       61 tccatagtta tgacaacgtg cagagcggct tcatgctctc ttacgtgcgg ccgctgcgcc
      121 gcaccatggg tgatgggccg ggagcagtgg gcgttgatta tccgctgcgg ttctccatcg
      181 gcgtgcagca gcagagcttt tacaacttcc ccggcgacgt gaggacatcc tcattccgtc
      241 cggtggcaca gatttcgctg ttctagattg gggcccctgg tttaatgaaa atctgcttta
      301 tcagtacatt tccgcccagc aaagtcgtgc ttaacgaata cggctttcac gtggcacgcg
      361 aactccagaa cgatccattg atcagcctga cggtgctggc agacgagctc agtgagcagg
      421 agccggagct gccggagttt gacgtggagc ggtgctggat gatgaaccgg ttcagcaatc
      481 atcgccagat actgaagtgc ctgcgcgaca tccggccgga tgtggtgtgg ttcaaccttg
      541 tgttctcgac cttcggcaac aaagagacgc cgctggcagc attttcagga ctcacactcc
      601 cagccatgac gcggatggcc ggctactaca cgcacgtgac gctgcaccac ctgatggacc
      661 acattgacct ggaagacgcg ggcgtgaagc acaaaacgct gttcaaattg gccgggaaca
      721 tggccacgcg catgatcctg atggccaact cggtttcggt gctgctgccg gcgtaccgac
      781 ggacgttgat cgataagtac cgtggcgaga acattcactt ccgcgctcac ggaattctgg
      841 gcgcacgacc ggtttaccct gatttttcgc aacgcggcaa tcccgaacat cgtattctgg
      901 catttggaaa gtggggaacc tacaagcgct gcgagatgct gattgaagca tttgaagagc
      961 aggtggcgcc gcgcgtagag aacgcccgcc ttgtcattgc gggaacaaac aacggcaatt
     1021 cgccaggcta cattgaagca ctgcgcgacc ggtacagcag ccatccgcgt atcgagttca
     1081 ccgggtacgt ggaagaagag cagatttcag agctcttcgg cagttcgtca ttcatggtga
     1141 tgccatacac ctctgccacc ggggccagcg gcgtggcgca tctggcggca cagcacggcg
     1201 tcccgatcat ctgctcgaat atcccagatt ttctggaaat gggtgaaagt gaggggctgg
     1261 cgatcaagtt ttaccccgtg ggcgacaaga acgccctggc gcaacagatg atcgagctgc
     1321 tggaaaatga acaagagcag catgaaatgg cggagcagaa cttttccgcc gcgctacggc
     1381 tgaccatgcc acagattatc cggcaatacg tacgcgcgtt cgaccggcat cagcgcgccc
     1441 gtgcgctgga agcagtatcg cgcttccgcc ggattccatc ctgggtgccg tcccgttcag
     1501 caatcttcag ggcttcgtcg ccgcgatggg gaaactgggt gtaagcatca cttaatcggc
     1561 tcgcttgccc cctcaaacac cttcgtcacg gtgctgcgac cgacgccgta aacaataaag
     1621 cccttatcat caaagccata ctcgcggaac aggagctcgg cgtaaccgtc gccgtccacg
     1681 tccacggcat caatcaactc gaggcgcgga gcgacatcga gccgcgagga atctgtgacg
     1741 cttacggcca gacgctgcgg cacgccatcg aaatccacgc gggcgatcag cgtgatgtaa
     1801 cgagagacga atttccccgg agtgcttttg gtattagccg tcatataggc gcccggggct
     1861 tctgccgtca gcaccatcac ggcttcattg ctcatgtcga gatcaaacga gcgaattgcc
     1921 agggtcttaa atgaccattc gtgctgctgg tcggcgcccg gaatctgtgc ctgcgccaac
     1981 ttgatgagct tggcctccat ctgctccttt tcaccggcct tccagggaaa ctcgtaagaa
     2041 cgagtgtcgt aagtctcgtt gtcagagacg ccagcgaatg tctgggtacc gggcgcgagc
     2101 gctgtaatct ggctcggtgc tggcgcattg gttggaggct gtggtgatgg cgtattggtt
     2161 ggagcgggcg attcggttcg gcggcgcaga acagggcggt cagaatcttg tggctcctgt
     2221 gcgaccagca acagagtaag cggcggcaga ggcgtggcac tgggcatagg gttcggttcg
     2281 ccaggacggt ggatgcgagg acgttcatca ggcaagccaa tgcggggtgt aggagtgggg
     2341 gttggagttg gtgttggtgt gctcgaggcg ggcgcagagc cagcttcacc acgatggagc
     2401 cgcgggcgat catcgacagc gcccggggtt ggtgatggag cggccttcgc caccgtagtc
     2461 gcggtttgcc atttgcccag ggcggtccac atgccagact tcgtcgcctt ggtaacggtc
     2521 acatacccaa tgggcactcc ggacttctgc acttcataaa ccacgccact atcgagcgcc
     2581 atcggctctg gagcagcctt gtagatgctg gcatcgttga agcgaccctg atcgagtata
     2641 gtgaccggaa ccacggtggc tttgctgacg ccgcttcggt ccgtggtgac ttcaactacg
     2701 gcggtggcgc gcagcttgtg aggcttgcgt cgctgggcgg atgcggtaag cagggcgagg
     2761 caggccagtg cggccagggt gaccgcaaag acggttctgc gatataaatt cattgttccc
     2821 ttaaacacaa aaaacctatg caagttaatg ataaagcccc ggaattctcg ctggcgaatg
     2881 aggacggtaa gacggtcgcg ctgaaagact accgcggaaa gaacgtggtg ctgttcttct
     2941 accccaaggc cgacaccccg ggttgaacga tagaggcgtg cgggttccgc gacgcattcc
     3001 agaaattgca gaaagccggg gcgacggtgt tcggcatctc ggccgataaa ccgtcagccc
     3061 agaagaaatt cagggagaaa cacgacctgc cctattcgct gctggctgat gaagacaaaa
     3121 tcatcgcgaa gaaatatgac gtgctcaagg aaaagagcac gtacgggcgg aagtacgtgg
     3181 gaatcgaacg gaccacgttc atcatctgcc cggagggaaa ggtttccgcg gtcttgaccg
     3241 gcctgaagcc agatgagcac gccgaggcgg cgctaaaagc tctgaaatag tgaaagggat
     3301 gcggctgcat ccccgtttca gtttcttcag aagctgctta gcgggcccca gttactgtga
     3361 aggtgtaaac actttctgcg ggaatcacgg cttcacgttt gccggtagct gcggctccgg
     3421 cagttccggc gcctgctccc gcagccgagc caatagctgc gcctttacct ccgccgacta
     3481 agccaccaat aatggcaccg ccagcggccc cgccgccgat ttttgccgca ttactcttgg
     3541 tatggctcgc gcccttcctg ctaacccggt tggtggaaac gggttcgccg tttacagagg
     3601 tcagccggat ggaaatctcc cccggcgcat gcagccggcc acttggcttc acgtaggtga
     3661 ctttgccggt caccggatcg ccggttctgg ctattacctt gccatgttct gtgatgtccc
     3721 tggtcaggct gcctgtccac gtctgcccct gatgggcact ggccgagctc agcgtatggc
     3781 tcacgcgcgc catcacatgt gtcccgctgg gtattttttc tgcgatggcc gcgttcgctg
     3841 ccactgccag aagtaatccc acaataccga tgttgcgatt tctcataact ttcctctgct
     3901 cctctgcgag cgaatgaatt cggccagtta tactttgcgg ttcgctgaat tttaaaccgg
     3961 gcgttgctcg tatttttccc gtcctacagc acggaggtga ttgtgcgctg gtgtactttg
     4021 ctgatcttcc taagctcggt tctggtccat ggccagcgct ctacgccgaa aaactccacc
     4081 ccggggcgag cgctccacgc gcttttcgat tctgagtggg actacgagat gcagcagtcg
     4141 cccgagtggg cttctactct gggcgatcgc cgctggaatg atcgttggca tgacgccagc
     4201 ataaaagcca ttgaggcacg tcaccagcac agcctgcagg tcctgggccg gctgaagcag
     4261 atcgaccgga cgaggctgga tgcgaaagat gagttcaatt atgacctctt caagaagagc
     4321 tatgaagatg acgtggaagg ctataagttc cgccggtttc ttgtcccgct gaaccagcgc
     4381 ggcggcattc agacccagga cgagctcacc gagaatctgc gctttgagac cgtgaaggat
     4441 tatgaagact ggatcgaccg catgcgtgcc ttccccgcac tcatggacca gaccatcgcg
     4501 ctgatgcgcg aaggcgccaa ggagcacatg gtccatccca aggtgatcat gcagcgcatt
     4561 cccgcgcaga tcgacaagca gatcgtatcc gatccagaga agagcggctt cttcaagcca
     4621 ttcctgcgtt accctgcttc catatcctcg gctgaccaga agcggcttag cgacgccgca
     4681 aggcaagccg tcgaacagca gatcgtgccg tctttcaaaa agctcaaaga attctttact
     4741 actgaatacc tgcccgcctg cttcgatcag gttggcgtgt ggcaggtacc gcacggcgac
     4801 gaactctatg cgtatgacgt ccggcactac acaacaacca acctcacgcc ggaccaggtg
     4861 catgaaatcg gtctgaagga agtggctcgc atcggtgccg aaatggatgg catcatggcg
     4921 aagaccggct tcaagggatc gaagcaggag ttcttcaatt acctgcgcac cgacccgaag
     4981 ttcttctaca aaactccgga agacctgctg gaagcctaca aagccacagc caagactatt
     5041 gatccgaatc tggtgaaggt cttccgtacg ctgccacgcg aaccctacgg tgtgcgcccg
     5101 attcctgacg tggccgcgcc ggataccact gcggcctatt acagcgaggg cgcggccgac
     5161 ggctcgcgcg ccggaaccta ttacgtaaac ctttacaaac cggatacccg cccaaagtgg
     5221 gaaatgatgg cgcttacgct gcatgaatcg gtgcccggac accatctcca gattgcccgg
     5281 gcccatgaat tgggagagat gcccaaattc aggcgcttcg ggtcctatac ggcatttgtg
     5341 gaaggctggg ggctttatgg cgagtcgctg ggcgaagaca tgggcctata tgacgatccc
     5401 tactccaaat tcggccagct tacttacgag atgtggcgcg ccgtgcgcct ggtggtggac
     5461 accggcatac acgccaagca ctggacgcga gagcaggcga tcaacttctt catggaaaat
     5521 gctcccaagg ctgagctgga cattgtaaac gagatcgacc gctacatcgc atggccggga
     5581 caggctttgg cctacaaaat cggggaattg aagatcaaag agctgcgtgc ccgcgccagc
     5641 cagcagctcg gtgcagggtt cgacctgaag ggcttccacg atattgtgct gggctctggt
     5701 gccgtcccgc tcgacattct ggagcggaat gtggacgcat ggattgcgga gcagcagaag
     5761 gagcaaaaga cggctgtaag taaacccgcg aagcctgagg ccggcggagc ggccgcgcat
     5821 tgatttgttc gcagtcggac aaggaggcgg gtaagtgatg agcgctgccg ctccggcgct
     5881 tggcaacgct gtaccatcgc ggagcttcga gcgcttctac cggccggaac tcgacgcact
     5941 gcgcttcttt gccttcttcg gcgtcttcgt gttccacgcg gcaccgcatg agcgcgcttt
     6001 ttatgacgct gcacaagccc cgcactggct cagcagcttt ctgatatcga gtttcggggc
     6061 aggcgcttac ggagtcgatc tgtttttcgc gctgagcgcg tacctgatca cgtcattgct
     6121 attgcgcgag cgagagcatc tcggcgaagt ggatgtacgc ggattttatg tgcgccgaat
     6181 tctccgcatc tggccactct atctcagctt tctgctcttc gctgccgctg tgggctgggt
     6241 ctttccatcg cagaggattg agggtcgata cctgctcgga tttacgt
//
LOCUS       DASQYP010000079        13018 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_300085, whole genome shotgun sequence.
ACCESSION   DASQYP010000079 DASQYP010000000
VERSION     DASQYP010000079.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 13018)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13018)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13018
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_300085"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1574)
                     /locus_tag="VE783_02595"
     CDS             complement(<1..1574)
                     /locus_tag="VE783_02595"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52310.1"
                     /translation="MQFLTITAPREPARATPRELHLLIEPEPWRRVFLRNLADLFRKG
                     PPPIWTTARPSPYWEDALVHRPVAWARIRQSILGHILVLMIVLWINLWWLDHPEVAKE
                     EVPQTTITHYELSEYLPAITPVDKSKARPAPPVRREVQKAEPEYAPQEIVSLHVEHSS
                     KQQTIVQPSPNFLHQDVPLPNLIVNSAVPGAPVVSGRAMQRLPLDQPQVVPPPAQMVS
                     RSQITFPVAPQPEVVPPASDMAAAHRLAQLPAVNPEVVPPSASVAASNLHRAPVLPME
                     GPLVVAPSQSIASRANQLTIPAQSPEIAPPPTRVTSRTTLAQALPDSAPQIVAPAQKL
                     ATRKLAQNLPDAAPQVVAPPQSATTRELPKAIPESAPQVAPPAPSVASRVLSALGIGA
                     IAPQAVPPPQPVAAGASRPQDKDQAIGQLLALNARPAPPAPTLKVPEGNRQGEFAAGP
                     TGTPGASARPETVAGETPSDPGHSAGTTSAGVFVGAPPAKITADTVVAGPPTPPIAHP
                     SIPDVPSADRVDNQIFG"
     gene            1645..2166
                     /locus_tag="VE783_02600"
     CDS             1645..2166
                     /locus_tag="VE783_02600"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52311.1"
                     /translation="MSRLRLLFLLLTLAGTYAAAQSGAAPRPQPQRTPSQNEPQQKSS
                     PAEDISGMYSFLHDGEFLQFDLQDQVLTGYISRRGDEESDRGAFLDQWFSKAAVIDHD
                     VTFTTRPLHGVVFDFKGKFERGPAKTKDVDGYYILRGTLTRTVIDSNQKTTSQSREVE
                     FKLLGQPQEDPKK"
     gene            complement(2220..2927)
                     /locus_tag="VE783_02605"
     CDS             complement(2220..2927)
                     /locus_tag="VE783_02605"
                     /inference="COORDINATES: protein motif:HMM:NF022072.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SRPBCC family protein"
                     /protein_id="HYX52312.1"
                     /translation="MAQDQAKFWTGFAAGAAAGALAGIGAVLAFKRSSETAGDHVVRL
                     EKSVNIGRPVSAVFAAWQNLERLPQSISFVKRIERFGTQSRWLVNIDGRDVEWDVQIT
                     QVVPNQSIGWKSLSGPYHTGRISFAPLGEQTVVHVLMNYAPPMGGFSSMLPIEQHLQQ
                     WIERGLRDFKAALERESGSQRSQGNEDRSGGWEPLQRTGTDTAQPWNESSGPVGTPGK
                     PSAPGTVNYTRPPKDKY"
     gene            3587..4969
                     /gene="dnaB"
                     /locus_tag="VE783_02610"
     CDS             3587..4969
                     /gene="dnaB"
                     /locus_tag="VE783_02610"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: protein motif:HMM:NF004384.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003678 - DNA helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="replicative DNA helicase"
                     /protein_id="HYX52313.1"
                     /translation="MATTDYSLDRGLPASADAERAILGAILLDNQAYPQAAEFLQADD
                     FSLDSHRRIYLRMMELAETGRPIDYVTLTEQLGQHKEIEAVGGVAYVTSLTDGLPRVK
                     NIEQYVRIVRDKALLRGLIHAASNAIQKAYDQEAPAEEIVDAAEADIFKVAEKRIGQG
                     FMGIPEIVKASFGSIDKLYEQGQRITGLETHFEELDAMTSGLQKSDLIIIAARPSMGK
                     TAFAINIAENAAVRDNKVVGVFSLEMSRESLLLRLLCSQSMVDSHKLRTGFLSREDYN
                     KLVAGLAALVEAPIYIDDTPGISISEMRAKCRRLQQAQGRLDLIIVDYLQLCAAAPAG
                     SAGKRYENRTQEVSAISRGLKALAKEMRCPVIALSQLSRAPESRTGNNRPQLADLRES
                     GAIEQDADVVGFIFREEVYKQDDPDLEGKAELIIAKQRNGPTGTCRMAFIKRSTRFEN
                     LAMESGPPEY"
     gene            complement(4970..5596)
                     /locus_tag="VE783_02615"
     CDS             complement(4970..5596)
                     /locus_tag="VE783_02615"
                     /EC_number="2.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family protein"
                     /protein_id="HYX52314.1"
                     /translation="MKIEPVRLEGRHIVLEPLELAHTPALAKASAGADTELYRWSPVP
                     QSETEARRYIETALAWRDAGTGLAFATVRKSDGVVIGSTRFFDIERWAWPAGHPEYGR
                     SGPDACEIGYTWLTPTAIRTPANTEAKLWMLTHAFESWKVHRVCFHTDVRNERSRMAL
                     ARIGGKFEGILRAHRMAADFIARDSARFSIIAAEWPEAKRRLETMLQQ"
     gene            complement(5633..7102)
                     /gene="cysS"
                     /locus_tag="VE783_02620"
     CDS             complement(5633..7102)
                     /gene="cysS"
                     /locus_tag="VE783_02620"
                     /EC_number="6.1.1.16"
                     /inference="COORDINATES: protein motif:HMM:TIGR00435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004817 - cysteine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006423 - cysteinyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine--tRNA ligase"
                     /protein_id="HYX52315.1"
                     /translation="MPLHLYNTLTNKVEEFRPAEDNTVRMYACGPTVYDFGHIGNFRT
                     FVAVDLLRRFLKQSGYKLQHVMNITDVDDKIIRNAAREGKSVQEYTKKYEHAFLEDME
                     TLNLQRPEKMVRATEHIAEMADFIKKLEEKGYAYRTEDGSYYFRIAKFPEYGKLSKKD
                     FGGIEVGARVDVDEYDKDNARDFALWKAPKPGEQVWETAIGPGRPGWHIECSVMSMKY
                     LGDSFDLHGGGEDLTFPHHENEIAQSESLTGKIFARFWMHVRFLLVEGKKMSKSEGNF
                     YTLRDLVLKGHKPSAIRFLLTSVPYRKQLNFTMDGLTQGQKSVERLREFKTRVTMAKV
                     EAGKNDSIQQLAADTKRRMREAMEDDLNTAEAMGAMFEMVREVNTLADRGELREEDKA
                     PLLSALDQFDEIFDVLKDDDAAKIARIAKWGESEGKAEAAALSRNGIPDEEVDRLVAD
                     RTAAKKARDFARADAIRAQLSEAGIIVEDTKDGIRWKRK"
     gene            complement(7202..7939)
                     /locus_tag="VE783_02625"
     CDS             complement(7202..7939)
                     /locus_tag="VE783_02625"
                     /inference="COORDINATES: protein motif:HMM:NF014346.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HYX52316.1"
                     /translation="MPRVPGFLRLFVCVVLFSIASLGQIPDKFTNLQVLPKDISKSEL
                     TGIMRNFAGDLGVRCGFCHVGGDPNTLQGVNFSSDESDKKKTARAMMRMVKTINQDYV
                     QKLGKTPAATVSCVTCHRGMNEPQTIDSVVQQTMAHDGIEAAIAKYRTLRTENYGNGK
                     YDFSDLPLNKLGESLLQADKIKEARAILELDTEFNPQSAWGTYLLGVAHEADGDKEKA
                     RADFQKALELNPKNGMAKRHLTALEQK"
     gene            complement(8029..9420)
                     /locus_tag="VE783_02630"
     CDS             complement(8029..9420)
                     /locus_tag="VE783_02630"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HYX52317.1"
                     /translation="MQTIQQLGRYEILAELGRGAMGAVFRARDPRIDRTVAIKTIGVP
                     GADRKSLNDYRERFFREAQAAGRLSHPGIVTIFDVSEDQTTLTPFIVMEFVNGTPLNE
                     YVSVASQGHLPLDAALDLVQQLAEALHYAHSAGIVHRDIKPANILITGEGRAKIADFG
                     IAKAAMSEATVPGQVMGTPGYMSPEQINGRLLDGRSDLFSLGVIAYWLLTGQKPFEGE
                     SITEVCVRVVSQEPALPSSVYPTLGQDFDYVLGRALAKDPAQRYQNGKAFALDVQDLL
                     AGRAPRSKTITVNSSPITPDPTVAVGTVAAAAKTNPSDSAEPGTTAPGRRGLRWPLYT
                     AAALLLMFAGAALLALSSSPRLPATLQVVGNYPFQSGQVYVWVDGELRYEDALRGPDE
                     RSRHPHTAHISAGAMAITLPVRAGKHIIRVQVDAPGNQFDHDTAIPGQFRAYSQKTLT
                     IDFRSKNLALAWE"
     gene            complement(9533..9883)
                     /locus_tag="VE783_02635"
     CDS             complement(9533..9883)
                     /locus_tag="VE783_02635"
                     /inference="COORDINATES: protein motif:HMM:NF015735.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YciI family protein"
                     /protein_id="HYX52318.1"
                     /translation="MAQFLLLLHADPAEWIKMPDAERQKWFGKYMAWGAQARESGILL
                     GSNKLVDDNGKVLRGPQAVVTDGPYSETKEVLGGYYMIEAPNYDEAVRLTKNHPHLEH
                     GGTIELRQVENLPR"
     gene            10235..11377
                     /locus_tag="VE783_02640"
     CDS             10235..11377
                     /locus_tag="VE783_02640"
                     /inference="COORDINATES: protein motif:HMM:TIGR01420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0043107 - type IV pilus-dependent motility
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PilT/PilU family type 4a pilus ATPase"
                     /protein_id="HYX52319.1"
                     /translation="MEENPKIELVRDPDAEELDSAGPISATRLNQWLATLVNHGGSDL
                     LLVSGVPVSMRANGECVALGTEPLRGEQIEAAVRPALGHHAMAQYQQDGIADSSYQVQ
                     GLGRFRINLHHERGRAAATIRALPAKIPHLRELHLPAGMEALSNLPRGLVLIGGPAGS
                     GKTTTLAALVHEINRRDARHILTIEDPIEYEHPHLRSVVEQLEVGTDVPDFPTALRAA
                     LRQAPDVLVVGEMRDPETMRMAVSAAETGHLVLSTLHTTDVVSTISRIADSFPLERQG
                     TIRQELSMVLAAVVTQILLPSRHGGRYPATELLMVSYGARQHIRRNALQHLHQEITLT
                     RKLGSFSLEESLADLYTQGHMSREDAMLYAIHPDDLDTLLRARSLR"
     gene            complement(11538..11933)
                     /locus_tag="VE783_02645"
     CDS             complement(11538..11933)
                     /locus_tag="VE783_02645"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52320.1"
                     /translation="MQLKKLLATAAFVGMIVMLAASYSFSKDKDESVTLHGEITDSQC
                     AFNVHSDARSHEWMIKKGVEGANDARSCTLHCVKDMGGKYVLVSKDEVYRLDDQVAAE
                     KFAGLKVKAVGTIDSKTKTMHVAKLEADK"
     gene            complement(11990..12418)
                     /locus_tag="VE783_02650"
     CDS             complement(11990..12418)
                     /locus_tag="VE783_02650"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52321.1"
                     /translation="MRISQAKVISAALCVTSAIALCAPFAYAANAHVVEIIADKDSKF
                     KIPNQSKPEITVKAGEAVLLRIDARRGKTWNRDGVVHGFTVIRKKDRVRVESWDLELR
                     PGMQEFKLVAPSEPGEYEVLCTVICSDDHEGMRARLIVVP"
     gene            complement(12423..12755)
                     /locus_tag="VE783_02655"
     CDS             complement(12423..12755)
                     /locus_tag="VE783_02655"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HYX52322.1"
                     /translation="MRRRATRTRTLLLITVIAGALFFAMAGWAKSDKEKNDAPSTGSS
                     TTSTHPKMDEASRLEGEKRFRANCGRCHNAPSKFPPRMMATVIRHMRVRATITDQDMR
                     LILGYMTE"
     gene            complement(12752..>13018)
                     /locus_tag="VE783_02660"
     CDS             complement(12752..>13018)
                     /locus_tag="VE783_02660"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52323.1"
                     /translation="ALKRLEVVGRGQQFFTASNLSVATLKKLGALGRDTNEGDFGLNY
                     YFRSDVRASASYGRQFALGHDANLWVVGMTWRFVSPLLPSGGVQ"
BASE COUNT         2560 a         3942 c         3764 g         2752 t
ORIGIN      
        1 ccgaagatct ggttatcgac gcgatcggcg ctgggaacgt cggggatgga gggatgcgca
       61 atgggcggcg tgggcggacc ggcgactacc gtatccgcgg tgatttttgc cggaggcgcg
      121 cccacaaaaa cgccggcaga agttgttcct gcgctgtgtc cgggatcaga cggcgtttca
      181 cccgccacgg tctccggacg cgccgaggct cccggcgtgc ccgtgggtcc ggcggcgaac
      241 tcaccctggc gattgccttc cggaactttc aacgttggcg caggcggtgc gggccgcgcg
      301 ttgagcgcga gcaactggcc aatcgcctgg tctttgtctt gcggacggct tgctcccgct
      361 gcaaccggct gcggcggagg aactgcctgc ggagcaatgg ctccaatccc cagcgcggaa
      421 agcactcgtg acgctacgct cggagctgga ggcgccacct gcggcgcgga ttctggaatc
      481 gctttcggaa gctcgcgcgt tgtggccgat tgcggaggag cgactacttg cggcgcggca
      541 tcaggcaagt tctgggcaag cttgcgggtg gcgagttttt gcgcaggcgc aacaatttgc
      601 ggagctgaat ccggcagagc ctgggccaga gtagtgcgcg atgtaacccg cgtgggcggc
      661 ggggcgattt ccggcgactg cgcgggaatc gttagctggt ttgcgcgtga ggcgatgctc
      721 tggctcggcg ccaccaccag gggtccttcc atcggcaaga cgggcgcgcg gtgcaagttc
      781 gaagcagcaa cgctcgccga aggcggaaca acttcaggat tcactgccgg aagctgcgcc
      841 agccggtgcg ctgctgccat atcgcttgcc ggaggtacaa cctcaggctg gggcgcaacc
      901 ggaaatgtaa tctggctgcg gctcaccatc tgcgccggcg gaggaaccac ctgcggctga
      961 tcgagaggta gcctttgcat cgctctgccg gaaaccaccg gtgctcccgg caccgcgctg
     1021 ttcacaatca ggttgggcag cggaacgtcc tgatgaagga agttggggct gggctgaaca
     1081 atggtctgct gcttgctgct gtgctccacg tgcagcgaga cgatctcctg cggcgcatat
     1141 tcgggctcag ctttttgaac ctctcggcgc acgggcggtg cgggcctggc tttggatttg
     1201 tcgacgggcg tgatcgcggg caggtactca gagagttcgt agtgcgtgat ggtggtctgc
     1261 ggaacttctt ctttcgccac ctcgggatgg tcgagccacc acaggttgat ccacagcacg
     1321 atcataagca ccagaatatg gccaaggatc gactgccgta tgcgcgccca tgctacgggc
     1381 cggtgcacca gcgcgtcttc ccaatatggc gagggccggg cggttgtcca gatgggggga
     1441 ggccctttgc ggaacaggtc ggccaggtta cgcaggaaaa ctcgccgcca cggctcgggt
     1501 tcaatcagca ggtgcagttc gcggggagtg gccctggcag gttccctggg cgccgtgatg
     1561 gtcaagaact gcataaacgc ttgaactcag ggggaagtag ctggaatata taggttccat
     1621 tatcccactg gcgagcaatg atctatgtca cgtttaaggc tactgttcct tcttcttacg
     1681 cttgcaggta cttacgcggc tgcgcaaagt ggcgcagctc cgcgtccgca gccgcagcgc
     1741 acgccttcgc agaacgagcc gcaacagaaa agctctcccg cggaagatat ttccgggatg
     1801 tacagcttcc tccacgatgg cgaatttttg caattcgatt tacaggacca ggtcttgacc
     1861 ggatatatct caaggcgtgg cgacgaagaa agcgatcgcg gggcatttct ggatcagtgg
     1921 ttcagcaaag cggccgtcat cgaccatgat gtgactttca ccacgcggcc tctgcacggc
     1981 gtggtgttcg atttcaaagg gaaattcgag cgcggtccgg cgaaaaccaa agacgtggac
     2041 ggctactaca tccttcgcgg aactctcacc cgaacggtga tcgattccaa ccagaaaaca
     2101 acttctcaat cgcgcgaagt tgaattcaag ctgctgggcc agccgcagga agatccgaaa
     2161 aaataaggcg cgccgttgca gcgcgcctca ttcttaattg aaaggattaa aaacgtcgct
     2221 cagtacttat ccttcggcgg acgcgtgtaa ttcaccgtgc ccggcgccga cggttttccc
     2281 ggagtaccca ccggcccact cgattcgttc cacggctgcg ccgtatctgt tccggtccgc
     2341 tgcagaggct cccagccgcc ggagcggtct tcatttccct ggctccgctg acttccgctt
     2401 tcccgctcca gagcagcttt gaaatcgcga agcccgcgct caatccactg ctgcagatgc
     2461 tgctcaatcg gcaacatgga agaaaatccg cccatgggcg gcgcataatt catgagcacg
     2521 tggaccacgg tctgctcgcc cagcggcgca aagctgatgc gtccggtgtg gtacggcccg
     2581 ctcagtgact tccagccaat cgactggttg gggaccacct gcgtgatctg gacgtcccac
     2641 tccacgtcgc gcccatcaat atttaccagc cagcgggact gtgtgccaaa gcgctctatc
     2701 cgcttcacaa aactgatcga ctgcggcaac cgttccaggt tctgccacgc tgcaaacacc
     2761 gcgctcaccg gccgcccgat gttcacgctc ttctcaagtc gcaccacgtg atcgcccgcg
     2821 gtttccgagc tgcgcttaaa agccagcacg gcgccgatcc cggccagcgc gcccgctgca
     2881 gctcccgctg caaatcctgt ccagaactta gcttggtctt gtgccatgtt cgtccctccg
     2941 tctcctcaaa aaggattgga acggaggcgg caagctcggg ttgccgagac ataggtgcgt
     3001 ttcgccggcc gttgcaagtc gcagcacgcg tggtgcaact ctgcaggtgt agctccgctt
     3061 ttccacccct ttccacagat ttcctcgatc tccacaggct tttccaccgc aaattgcttg
     3121 cggggacttg tccgcgctcc acccgaagcg cgatagttct aacactcaag tgtgcgatgt
     3181 tcccgcatga ggttgcgttc ggtttcaagg aaccgggaac aggctctggc gagcagtgtt
     3241 ggagcttaat ctgcgttggc tggaaacagc ctgaatctca ggagcagcgt gcgtcctgag
     3301 cgtgagagaa gctcgcgtca atcgtatgcc gcgacggcaa cgcgcggcag cgtgaacatc
     3361 acaccccgca aagcccggct tgtatggctg gtacaagccg ggttttattg cgaccaaagc
     3421 ggcaggctcg cgaatggcct tccgcaaacc tgaatcggag atacaactca accggcaagc
     3481 aagtgccaga caacaccgcc ggcttcaggc ggaagggaca agtgcggctg cacagtttct
     3541 ggtgcgcttc tccccacttt cgcctagaat gacattgttt tagctgatgg cgactacaga
     3601 ttacagcctt gaccggggac ttcccgccag tgccgacgca gagcgggcta tcctgggggc
     3661 gatcctgctc gataaccagg cctatcccca ggccgccgag ttcctgcaag cagacgactt
     3721 ctccctcgac tcgcatcgcc ggatttacct gcgcatgatg gagctggccg aaaccggccg
     3781 gccgattgat tacgtcaccc tgaccgagca gcttggccaa cacaaagaga ttgaagccgt
     3841 gggcggtgtg gcgtacgtca cgtcgctgac cgatggcctt ccgcgtgtca aaaacatcga
     3901 gcagtacgtc cgcattgtcc gcgacaaggc attgctgcgc gggctgatcc acgcggccag
     3961 caacgccatt cagaaagcct acgatcagga agccccggcg gaagaaatcg tcgacgctgc
     4021 cgaagccgac atcttcaaag tggcggaaaa gcgcattggc caggggttca tgggaatccc
     4081 ggagatcgta aaggcgtcct tcgggtcgat tgacaaactt tatgagcagg gccagcgcat
     4141 caccggactg gaaacgcatt tcgaagagct ggatgcaatg accagcggcc tgcagaagtc
     4201 tgatttgatc atcattgctg cgcgcccgtc gatgggtaag accgccttcg ccatcaacat
     4261 cgcggagaac gccgcggtgc gcgacaacaa ggtcgtcggc gtgttctcgc tggaaatgtc
     4321 gcgggaatcg ctgctgctgc gcctgctgtg ctcgcagtcc atggtggatt cgcacaagct
     4381 gcgcaccggc tttttgagcc gcgaagatta caacaagctg gttgccggcc tggcagcgct
     4441 ggtggaagcg cccatctaca ttgatgacac ccctggcatc tccatttcag agatgcgcgc
     4501 caagtgccgt cgcctgcagc aggcccaggg gaggcttgac ctgatcatcg tggactacct
     4561 ccagctctgc gccgcagctc ccgcgggcag tgcgggcaag cgctatgaaa atcgcacgca
     4621 ggaagtttcc gcgatctcgc gcggcctcaa agcgctggct aaagaaatgc gctgcccggt
     4681 gatcgcgctc tcgcagctaa gccgcgctcc ggaaagccgc accgggaata atcggccgca
     4741 gctcgctgat ctgcgcgaat ccggcgccat agagcaggac gcggacgtgg tcggatttat
     4801 cttccgagaa gaagtttaca agcaggacga tccagatctt gaaggcaaag cggaattgat
     4861 cattgccaag cagcgcaatg gcccaaccgg gacttgtcgc atggcgttca tcaagcgctc
     4921 cacgcgattc gagaatctcg cgatggagag cggcccaccg gagtactaat cactgctgta
     4981 gcatcgtctc cagccgccgc ttcgcctccg gccattctgc cgcgataatg gaaaaccgcg
     5041 ccgaatcgcg cgcaatgaaa tcggcagcca tgcggtgcgc gcgcagaatc ccctcaaact
     5101 ttccaccaat gcgcgccagc gccatgcgcg agcgttcatt tcgtacgtca gtgtggaagc
     5161 acacccgatg caccttccag ctctcgaagg catgtgtgag catccacagc ttggcttcag
     5221 tattggccgg ggtgcgaatt gccgttggcg tcagccaggt atagccgatc tcgcacgcgt
     5281 cgggaccgct gcggccgtat tcgggatgcc cggctggcca cgcccagcgc tcaatatcaa
     5341 aaaagcgcgt tgagccgatc accacaccat cggacttgcg cacggtagca aatgccaaac
     5401 cagtcccggc atcccgccac gccagcgctg tttcaatgta gcgccgcgcc tccgtctcgc
     5461 tttggggcac aggactccat cggtacaact cggtatcggc tccggctgaa gcctttgcca
     5521 gtgcaggtgt gtgcgcaagt tccagcggct ccaaaacaat gtgtcggcct tccagccgaa
     5581 ccggttcaat cttcatgaga tctcgcgtca aggaacacga tgagacggga gcttacttcc
     5641 gcttccagcg gatgccgtct ttggtgtctt ccacaatgat gcctgcttcg ctcagctgtg
     5701 cccggatcgc gtccgcccgg gcaaaatcgc gagctttttt tgccgcggta cggtcggcta
     5761 caagccggtc cacttcttca tcggggatac cattcctcga tagggcagcc gcttcggcct
     5821 taccttcact ttccccccat tttgcaatcc ttgcgatctt ggcggcgtca tcgtctttca
     5881 gcacatcaaa aatctcgtca aactgatcga gcgcggagag caaaggcgct ttatcttctt
     5941 cgcgcagctc gccgcgatcg gccagcgtgt tcacctcgcg taccatctca aacatagctc
     6001 ccatggcctc ggccgtgttc aggtcgtctt ccatggcttc acgcattcgg cgcttggtat
     6061 cagccgcaag ctgctggata gagtcgttct tcccggcttc aactttggcc atggttacgc
     6121 gcgtcttaaa ctcgcgcagg cgttccactg atttctggcc ttgcgtaagg ccatccatgg
     6181 tgaagttgag ctgtttgcgg tagggaactg aggttagtag aaagcggatc gcggaaggtt
     6241 tgtggccttt tagcaccaag tcgcgcagcg tatagaagtt gccttcgctc ttggacatct
     6301 tcttgccttc caccagcagg aagcgcacgt gcatccagaa ccgagcgaag atctttccgg
     6361 tcagggattc agactgggca atttcatttt catgatgtgg gaaggtcagg tcttcgccgc
     6421 cgccgtgcag atcgaagctg tctcccagat acttcatgga catcacggag cactcaatgt
     6481 gccagcccgg acgccccggc ccaatcgccg tttcccacac ctgctcgcct ggcttggggg
     6541 ctttccagag cgcgaagtcg cgggcgttgt ctttgtcata ttcgtccacg tccactcgcg
     6601 ccccaacctc aatgccgcca aagtctttct ttgaaagctt gccatactcc ggaaacttcg
     6661 cgatgcggaa gtaataagaa ccgtcttctg tgcggtaagc gtagcctttc tcttccagct
     6721 tcttgataaa atcagccatc tcggcgatgt gctcggtggc acgcaccatc ttttccggcc
     6781 gttgcaggtt gagcgtctcc atgtcttcca aaaacgcatg ctcgtacttc ttcgtgtatt
     6841 cctggactga tttgccttcg cgcgcggcgt tgcgaatgat cttgtcgtcc acatctgtga
     6901 tgttcattac gtgctgcagc ttgtaaccgc tctgcttcag gaagcgccgc agcaggtcca
     6961 ccgcaacaaa cgtacgaaag ttcccgatat gcccgaagtc atacacggtc ggcccgcagg
     7021 cgtacatccg gacggtattg tcctcggcag ggcgaaactc ttcgacctta ttagtgaggg
     7081 tattgtagag atgtagaggc atcagattcc ggtgacggaa cgttgattct aacaaagcat
     7141 ttgcaagcag gcgtgtgaca ccggccgcgg cagaggaccg cggaatctct cgaatcccag
     7201 attacttctg ttccagcgct gtcaggtgtc gctttgccat tccgttcttc gggttcagct
     7261 ccagcgcttt ctgaaagtca gcccgcgcct tctctttgtc gccgtccgct tcatgcgcga
     7321 caccgagcaa gtatgtcccc catgcggatt gcgggttgaa ttcggtatcc agttccagga
     7381 tggcccgggc ctccttgatc ttgtctgcct gcagaagtga ctctcccaat ttgttcaggg
     7441 gaaggtcgct gaagtcgtac ttcccattcc cgtagttctc tgtccggagc gtgcgatatt
     7501 tcgcaatagc ggcctcgatg ccgtcatgcg ccatagtctg ctgcaccacc gaatcaatcg
     7561 tctggggctc attcatcccg cgatggcagg ttacacagct caccgtggcc gcaggcgttt
     7621 tgcccagctt ctgcacataa tcctgattga tggttttcac catgcgcatc atggcgcggg
     7681 cggtcttctt cttgtcgctc tcatcggatg aaaagttcac tccctgcagc gtgttaggat
     7741 cgccacccac atggcagaac ccgcaccgca cccctaaatc ccccgcaaag ttgcgcataa
     7801 ttcccgtgag ctcagatttg gaaatgtctt tgggaagcac ttgcaggttg gtgaacttgt
     7861 ctggaatttg acccaacgaa gctatcgaaa agagcacgac gcacacgaac agccgcagaa
     7921 agccgggaac acggggcata ggctatcgct cccaagatgt ggtgttactg ctcgggaatt
     7981 ggactgaagg actcaaggga ggtgagcaac gccggacgaa gtatgccgtt attcccaggc
     8041 cagcgccagg ttcttgctcc tgaaatcgat cgtcagtgtc ttctggctgt aggcgcggaa
     8101 ctgaccgggg atggccgtgt cgtgatcaaa ctgattgccg ggagcgtcca cctgcacgcg
     8161 gatgatatgc ttgcccgctc gtacgggaag cgtgatcgcc atggctcccg cgctgatatg
     8221 ggcggtgtgg ggatgacggg agcgctcgtc tgggccccgc agcgcgtctt catagcgcag
     8281 ttcgccatcc acccagacgt aaacctgccc gctctggaac ggatagttgc ccaccacctg
     8341 aagcgttgcc ggtagcctgg ggctcgaact caatgcgagc agcgccgcac cggcaaacat
     8401 cagcagcaac gcagcagcgg tatagagcgg ccagcgcaac ccgcgccgcc cgggtgcagt
     8461 cgtccccggt tcggcgctat cactcggatt tgtttttgcc gcggccgcaa cggttcccac
     8521 agcgactgtc ggatcaggtg tgatcgggga cgaattcacc gtgatcgttt ttgatcgcgg
     8581 cgcgcgaccc gcaagcaaat cctgcacgtc gagcgcaaac gctttgccgt tctgataccg
     8641 ctgcgccgga tctttagcca gagcgcgtcc aagcacgtaa tcaaagtcct gccccagcgt
     8701 gggatagacg ctgctcggga gcgccggttc ctggcttacc acacgcacgc aaacttcagt
     8761 gatgctctcg ccttcaaacg gcttttggcc cgtgagtagc caatacgcga ttacgcccaa
     8821 cgaaaacagg tctgagcggc cgtccagcag cctgccgttg atttgctcgg gcgacatgta
     8881 ccccggcgtg cccatcacct gcccaggtac cgtggcctct gacattgcgg ctttggcaat
     8941 gccgaagtcg gcgatcttgg cgcggccctc gccggtgatc aggatgtttg ccggcttgat
     9001 atcgcgatgc acgattcccg cgctgtgcgc gtaatgcagg gcttcagcca actgttgcac
     9061 caggtctagc gccgcgtcga gcggcaaatg tccttgtgac gcgacggaaa cgtactcatt
     9121 cagcggagtg ccgttcacaa actccatcac gatgaacgga gtcagcgtgg tctggtcttc
     9181 gcttacgtcg aagattgtta cgatccctgg atgagaaagc cgcccagcgg cctgcgcttc
     9241 gcggaagaag cgctcgcgat aatcattgag gcttttgcgg tcggctcccg gcacgccgat
     9301 ggtcttaatg gcaactgtgc gatcaatccg cggatcacgc gcgcggaaca ccgcgcccat
     9361 ggccccgcgg ccaagttccg caagaatttc gtaccgcccg agttgctgga tggtctgcat
     9421 gactgccgat cgagcccgaa aagccttgaa aatgcgggga tttccggcga tcttagcacg
     9481 agcgaaaccg gctctggccc aaccgtcagt tcatggccgt tcgcgccaaa tactatctcg
     9541 gcagattctc cacctgcctg agctcaatgg tcccgccatg ctccaggtgg ggatggttct
     9601 tcgtcaggcg taccgcctcg tcataattcg gggcttcaat catgtagtag ccgcccagca
     9661 cttccttggt ctcgctgtat ggcccatcgg taaccaccgc ctgcggcccg cggagcacct
     9721 tgccgttatc gtcaaccagt ttattgctgc ccaaaagaat gccggattcg cgcgcctgcg
     9781 cgccccacgc catgtacttg ccgaaccatt tctgccgctc agcgtccggc atcttgatcc
     9841 attcggccgg gtcggcatga agtaacaaaa ggaactgtgc catctcgatc tccttgggtt
     9901 catagaagta tttcagctct tgctttgtcc cgccatcacg acgtttaaac ctgtcccaat
     9961 cgacattggc cgcaagaaaa attcacggct acgatcattc attgtgcgca gtgccgaagc
    10021 ccttagaaag cgatttcata aatgaggcga cagctgagac cggttcggga ccgtgattga
    10081 ctgcccggct ggcttcgctc ttgcgtgctg aatgtagctc ttgttaattg tgtaccgagg
    10141 tccggcacag gcgagggcgc ctgtgctaca aatggttttt aaacggacag agtcatcagt
    10201 tatatagctt ctaatcagtt ggcaggccct cacggtggaa gagaacccca aaatcgagct
    10261 ggttcgcgac cctgacgcgg aagaacttga ttcagcaggg ccaatctcgg caacccggct
    10321 gaatcaatgg ctggccactc tggtaaatca cggcggcagt gatctcctgc tggtcagtgg
    10381 cgttccggtg tctatgcgag ccaatggcga gtgtgtcgcc ttgggcaccg agccgctccg
    10441 gggtgagcag attgaggctg ccgtgcggcc ggcgcttggg catcatgcga tggcgcagta
    10501 tcagcaagat ggcatagccg atagctccta ccaggtccaa ggacttggcc ggttccgcat
    10561 caacctgcat cacgagcgcg gccgcgcggc ggcaaccatc cgcgcgctgc cggcaaagat
    10621 tccgcatctc cgcgagcttc acctgcccgc aggcatggaa gcgctcagca atttgcctcg
    10681 cggactggtg ctcatcggcg ggccggccgg ttcaggcaaa accactacgc tggcggcgct
    10741 ggttcatgag atcaatcgcc gcgacgcccg ccatatcctt actattgaag accccattga
    10801 gtatgagcac ccccacctgc gcagcgtggt ggaacagctg gaagttggca ctgacgtccc
    10861 ggatttcccg actgcgcttc gcgccgcgct gcggcaggcg ccagacgtgc tcgtggtggg
    10921 agagatgcgc gatccggaaa ccatgcgcat ggccgtgagc gccgctgaaa ccggccatct
    10981 ggtgctctcg acgttgcaca ccacggatgt agtttccacc atctcacgca tcgctgactc
    11041 ttttccgctg gagcggcaag gcacgatccg gcaggagctc tccatggttc tcgcggcggt
    11101 ggtcacgcag atcttgctgc ccagcaggca cggcggaaga tatcccgcaa cggaactgct
    11161 gatggtgagc tacggcgccc gacagcacat ccggcgcaac gctctccagc acctgcacca
    11221 ggaaattact ttgacgcgga agctcggctc attcagtttg gaagaatcgc tggctgatct
    11281 ttatacgcaa gggcacatgt cgcgggaaga tgcgatgctc tatgctatcc atcctgacga
    11341 tctcgacact ctgttgcgcg cccgcagcct gcggtgagag ccgccactga tacatgcgtt
    11401 agcgagcgaa agttcccgaa tacaacaaat cccgcaacgc gcacaggggc gtcacgcggg
    11461 tggttggcat ggcagtgcaa agcgcgcagc catcgccatg accgcgcgct gcacgcctgc
    11521 ttgaagtttt gaggaattta cttatcggct tcgagcttag ccacgtgcat cgtcttggtc
    11581 ttggagtcga tggtgcccac ggccttcacc ttcaggccgg caaacttctc cgctgcaacc
    11641 tgatcgtcca ggcgatagac ctcgtctttc gagaccagca cgtactttcc gcccatatct
    11701 ttcacgcaat ggagcgtgca actgcgggcg tcgtttgcgc cttccacgcc tttcttgatc
    11761 atccattcgt gcgaacgggc gtcagaatga acattgaacg cgcactggct gtcagtgatc
    11821 tcgccgtgca gagtaacgct ctcatcttta tctttgctga aggagtagga agccgcgagc
    11881 atgacaatca tgccgacaaa cgcggcggtg gccagaagtt ttttcagttg catggagcta
    11941 ttcctttgtt gctgggcaaa gccttggatt tccgtcggaa caaactcaat cagggaacca
    12001 cgatcaggcg ggcacgcatg ccctcatgat cgtcactgca gataacggtg cacagcacct
    12061 catactcccc gggttctgag ggcgccacca gcttaaactc ctgcatgccg ggccggagtt
    12121 ccaggtccca actctctacg cggacccggt cctttttccg tatcacggtg aatccgtgga
    12181 caacaccgtc acggttccag gtcttgccgc ggcgcgcgtc aatgcgcaag agcaccgctt
    12241 cgccggcctt gaccgtgatc tccggcttgc tctggttggg aatcttgaac ttgctgtcct
    12301 tgtcggcgat gatttcgacg acatgcgcgt ttgccgcgta ggcaaacggc gcacacaacg
    12361 cgatagccga cgtaacgcag agagctgcgg aaatgacttt ggcctgggat atcctcattt
    12421 tgttattcgg tcatgtagcc caggatgagc cgcatgtcct ggtcagtaat ggtggcgcgc
    12481 acgcgcatgt ggcggattac ggtcgccatc atgcggggcg ggaactttga aggagcgtta
    12541 tggcagcggc cacagttcgc ccggaaacgc ttctcgcctt ccaggcgcga cgcttcatcc
    12601 atcttcgggt gcgtgctggt tgtcgatgag ccggttgacg gcgcatcgtt cttttccttg
    12661 tcgcttttcg cccatcccgc cattgcgaag aatagagcgc cggcaatcac tgtgatcaga
    12721 agaagtgtcc gggttctcgt tgcacgcctc ctcattgcac acccccggat ggcaacagcg
    12781 gtgatacaaa gcgccacgtc atgcccacca cccacagatt tgcgtcgtgt cccagcgcaa
    12841 actgccggcc gtaactggcg gacgcgcgga catcactgcg gaagtaatag ttcagcccga
    12901 agtcgccctc gttggtgtcg cgtccgagcg cgccaagctt tttgagcgtc gccacggaga
    12961 ggtttgaggc ggtaaagaac tgctgcccgc gtcctaccac ttccaggcgt ttgagggc
//
LOCUS       DASQYP010000080         2240 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_150773, whole genome shotgun sequence.
ACCESSION   DASQYP010000080 DASQYP010000000
VERSION     DASQYP010000080.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 2240)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2240)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2240
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_150773"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..332)
                     /locus_tag="VE783_02665"
     CDS             complement(<1..332)
                     /locus_tag="VE783_02665"
                     /inference="COORDINATES: protein motif:HMM:NF018663.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HYX52324.1"
                     /translation="MHKITPFLWFNHEAEEAMNHYVSIFKNSKVISVNRTGGKVFMLT
                     AELDGQRVMALNGGPQFKFTEAISFFVECETQAEVDDFWEKLSAGGQPGRCGWLKDKF
                     GLWWQIIPS"
     gene            421..702
                     /locus_tag="VE783_02670"
     CDS             421..702
                     /locus_tag="VE783_02670"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52325.1"
                     /translation="MHSKTRIFALLLAGCIASSVGVAQDRDHDHDRARDKCEQKVRKA
                     EQNLNNAVRKHGEHSRQAEQKRHSLQEARERCGGAMGHDRDHDHDHDHR"
     gene            818..1159
                     /locus_tag="VE783_02675"
     CDS             818..1159
                     /locus_tag="VE783_02675"
                     /inference="COORDINATES: protein motif:HMM:NF013427.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TraR/DksA family transcriptional regulator"
                     /protein_id="HYX52326.1"
                     /translation="MEKTEINRFQQILTTRRDELRRVLSKEENQDAHDFGRDEGDRAN
                     FSQSKEMSFRQKAQDRGLLVMVEAALGRIESGTFGECMSCGQEISSKRLNAVPWSRYC
                     ITCQELIAERG"
     gene            complement(1185..>2240)
                     /locus_tag="VE783_02680"
     CDS             complement(1185..>2240)
                     /locus_tag="VE783_02680"
                     /EC_number="6.5.1.1"
                     /inference="COORDINATES: protein motif:HMM:NF006078.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003910 - DNA ligase (ATP) activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA ligase"
                     /protein_id="HYX52327.1"
                     /translation="PYPPAEAKAVKEIPPDQVWLYEPKWDGFRCLAFRDGDEIVLQSK
                     AGQPLARYFPELVEQLKTLPARKFVLDGEVIIRGAAGLDFDALLQRIHPAASRITKLS
                     QQTPSSYLVFDLLVNEKGKSLVGMPLSARRMALQEFAANFKGAERIHLSPASADLAIA
                     QRWMKQGATQGLDGVVAKRLDCEYMTGERTGMVKIKRLRTADCVIGGFRWAHGKGKKP
                     GDEVGSLLLGLYNDQGQLDHIGFSSSFAAPERKKLKGILKPLIAKQSGPHAGFSGKAP
                     GGPSRWTRDAAAIEWIPLEHKLVGEFQYDHFSGDRFRHGTKFMRWRPDKDPRQCTMEQ
                     VLPGRGKVKDGLKEFGL"
BASE COUNT          486 a          664 c          624 g          466 t
ORIGIN      
        1 gatgggatga tctgccacca caatccgaat ttgtctttca gccagccgca ccttccaggc
       61 tgtccgcctg ccgatagctt ctcccaaaag tcatccactt cagcctgggt ctcgcattcc
      121 acaaagaacg agattgcctc cgtaaacttg aattgcggcc cgccattcaa agccatgact
      181 ctttgcccgt ccaactccgc cgttagcatg aacaccttgc cgccggtgcg gttcacgctg
      241 atcacctttg aattcttgaa aatggaaacg taatggttca ttgcttcttc ggcttcgtga
      301 ttgaaccaca ggaatggcgt gattttgtgc atgggacctc cgtaatggca gatcaacgat
      361 tctatacgtc cgtgatcagc aactgagcgt gatagacttt gttgctcagg gaggtcgagc
      421 atgcactcga aaaccagaat ttttgccctg ttgcttgcag gctgcattgc aagcagcgtg
      481 ggagtagcgc aggatcggga tcacgatcac gatcgcgcca gggacaaatg tgaacagaag
      541 gtccgtaaag cggagcaaaa cctgaacaac gccgtccgca agcatggaga acacagccgc
      601 caggctgaac aaaagaggca ttccctgcaa gaggcgcggg agcgttgcgg cggagccatg
      661 ggccatgacc gtgaccatga ccacgatcac gatcatcgct agtcgctagt ctgatgggaa
      721 atgcggtaaa gtactaggag gccaggccag gaggtctggt cttcttactt ccgcaaaagc
      781 ggcccacacg gaccttttgc ggatcgaaca gcacgttatg gaaaagacag agatcaatcg
      841 ttttcagcag atcctcacca ccaggcgtga cgagttgcgc cgcgttctga gcaaagaaga
      901 aaaccaggac gcccacgatt tcgggcgcga cgagggcgac cgcgccaact tctcgcaatc
      961 aaaagaaatg agcttccgcc agaaggcaca agaccgcggg ttgctggtga tggtggaggc
     1021 cgctctgggc cggatcgaga gtggcacgtt cggggagtgc atgagctgcg gccaggaaat
     1081 cagcagcaaa cgccttaacg ccgtcccctg gagccgctac tgcatcacct gtcaggaact
     1141 gatcgcggaa cggggctgag aacccgacgc tcgctcaggg cacgctacag cccaaactct
     1201 ttcagcccgt ctttgacctt gcccctgccg ggcagcactt gctccatggt gcactggcgc
     1261 gggtccttat ccggacgcca gcgcataaac tttgtcccgt gccgaaagcg atcgccggaa
     1321 aagtgatcgt actgaaattc gcccaccagc ttgtgctcga gcgggatcca ctcaatggct
     1381 gctgcatcgc gggtccagcg gctaggccct ccgggcgctt tgccggaaaa gccggcgtgc
     1441 ggccctgatt gttttgcgat cagcggcttc aagatgccct tcagcttttt gcgttccggt
     1501 gcagcgaagc tcgaactgaa gccgatgtgg tccagctgtc cctggtcgtt gtaaagcccc
     1561 agcaacagtg agccgacttc atcgccaggc ttcttccctt ttccgtgcgc ccagcgaaag
     1621 ccgccaatca cgcagtcagc tgtgcgcaag cgcttgatct tcaccatgcc agtgcgctcg
     1681 ccggtcatgt attcgcaatc gagccgcttg gccacgacgc catccagccc ttgtgtggcg
     1741 ccctgtttca tccagcgttg cgcgattgcg agatcagcgc tcgcgggcga aagatgaatc
     1801 cgttctgcgc ctttgaagtt ggccgcaaat tcctgcaacg ccatgcgcct cgcggagagc
     1861 ggcatgccaa ccagtgactt ccctttttcg tttaccagca gatcaaaaac caggtagctc
     1921 gacggtgttt gctgcgacag cttcgtaatt cggcttgccg cgggatgaat gcgctgtagc
     1981 agcgcgtcga aatcaaggcc cgcagcgccg cgaatgatga cttcaccatc gagcacaaac
     2041 ttgcgcgcgg gcagcgtctt tagctgctca accagttccg ggaaatagcg tgcgagcggc
     2101 tgccccgcct tcgattgcag cacaatctca tcgccgtctc ggaatgccag gcagcggaat
     2161 ccgtcccatt ttggctcgta caaccagacc tggtctggcg ggatttcctt cactgctttc
     2221 gcttctgcag gtggataagg
//
LOCUS       DASQYP010000081         8932 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_68436, whole genome shotgun sequence.
ACCESSION   DASQYP010000081 DASQYP010000000
VERSION     DASQYP010000081.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 8932)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8932)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8932
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_68436"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..3496
                     /locus_tag="VE783_02685"
     CDS             <1..3496
                     /locus_tag="VE783_02685"
                     /inference="COORDINATES: protein motif:HMM:NF039178.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="MBG domain-containing protein"
                     /protein_id="HYX52328.1"
                     /translation="DASNNPVAGASITFAVNGTNLSPAATTNASGVASFSYNPSALPA
                     SATAYSVGSTFSAATISGLSFLGSSATGSLTVNKATPVITWANPADIAFGTALSTTQL
                     NATATANGAAVPGAFTYTPAAGTVLNAGTNQTLSVDFVPNDSTNYNSVLHTTALINVL
                     KATPAISVSGGPFTFDGTGHAASITVTGVGGAAVSGSTAITYNGNSVAPIDAGTYSVS
                     VSFTSADPNYSNTTGSGSIVIDKADSVTTVSGSFNFTYDATAHPATVSVTGAGGLSLT
                     PDPVYSCGHAPINVADSGCTASFSFAGDANHNPSSDSKTYTISKATPLVTVSGGPFTF
                     DGNPRTATITVTGVGGVTVTGSSAVTYNSLAAIPVNAGTYAVAVSFTSSDNNYGNANG
                     SGSVVINKADSMTTVSGTFSFTYDATPHPANVSVTGAGGLSLTPDPAYNCGHAPINVA
                     DSGCTASFSFAGDNNHNPSSDSKTYTVSKATPLVSVSGGPFTFDGNSHSATIVVAGVG
                     GVSVTGTLAVTYNGVAALPLNAGTYAVGVSFTSSDNNYTDAMGSGSIVINKAPSVTTV
                     SGTFTFTYDATAHPATVSVTGAGGLSLTPDPVYSCGHAPINVSDSGCTASYNFSGDEN
                     HNPSSDSRMFTITKATPLVSVSGGPFTFDGNSHPATIVVTGVGGGSVAGTSAVTYNGV
                     ATLPVNAGTYAVGVTFTSSDNNYDNASGSGSILINKAASVTTVSGVFTFVYDATAHPA
                     AVSVTGAGGLNLTPDPVYSCGHAPINVADSGCTASYSFPGDDNHNPSSDSRTYSISRA
                     TPLVSVTGGTFIFDGNTHPAGVAVTGVGGVNVSGTLVLTYNGLAALPLNANSYVVSAS
                     FTSSDNNYDNATGAGSVVITQAPSATTVSGVFSFTYDGNPHPATVSVTGAGGLNLAPS
                     PLYSCGHVPTAVADSGCIASYNYPGDINHAASSDAKTYTIGKATPVLTINPVATLTIG
                     NPVTISGTLKLGALIPTGSVTITLNGASQTAAVGAGGTFSTIFPAGTVDVGSFGVSGI
                     YPGDTNFFGASNSGLVTFAVQYGVCYLYDQTKAVQHNATVPIKLQLCDSAGHNLSSSA
                     VTVTATSVALLTGATGTLEDSGNANPDDNFRYDPTLQGYIFNLSTKSLNSGTWRLYFR
                     TSKDAGTGSPYMAGFGVR"
     gene            complement(3677..4177)
                     /locus_tag="VE783_02690"
     CDS             complement(3677..4177)
                     /locus_tag="VE783_02690"
                     /inference="COORDINATES: protein motif:HMM:NF015679.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase family protein"
                     /protein_id="HYX52329.1"
                     /translation="MKIRRPVQGVLLCIALIVAAGSEPPLVADRIVIVKSSRTMTLLN
                     AGKVLKTYKVALGGSPTGGKERQGDEKTPEGEYKIDSRNSHSQFHLALHVSYPNAADR
                     ERARRLGVDPGGDIMIHGLPQAWAWLGAAHRQRDWTLGCIAVTNQEIEEIWQLVPVGT
                     AVEIRP"
     gene            complement(4208..6457)
                     /locus_tag="VE783_02695"
     CDS             complement(4208..6457)
                     /locus_tag="VE783_02695"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52330.1"
                     /translation="MAFSFLQRGNLSDHVRELTLNSYEPALAIEGLVAGIDNVRHDVF
                     LSPRFTEAARNHLYKLIARHGGVEDLAAEEPRTARLGAGTPARIRERQAQGTKPFDSN
                     EFKRLFIELHLSALTQVKSQGGVALDLLFRLAVLKFLRAELMTQYTLVLERCRARMKA
                     YEGPRHSGMSSAMELRERLSRFQVNKRAVLRRVGQDLFNIVRDAEKESLGKTRRSLMG
                     DAGSPVYELFVNRLLFSEDAQDSVLNAEHYVMLGNYERDADRFERMREIAARLLKALA
                     LVVDAEDSRLDGLLSSAENAHELTAAGAPDDSSPKGKAQRAILGAWVDILQEAGVTEH
                     VIASYEVVPLLTQYSAAINPQQLKSALINKAERKRVDSLLEEQGRISTENLDAAVRRV
                     EGTRPAERAKLAGRYFADFCRYHRDLRRMETVLAAFEKVNVLGSEKFRELSAVNNTLY
                     EYLLPEEQKPAEDKVLHHVVIKADIRESTTLTRTLFEKGLNPASYFSLNFYDPINKLL
                     PKYDARKVFIEGDAIILALLEHEGEPALGVAQACVLAKEIIEVVTACNERSLADGLPT
                     LELGIGISFQDSAPMYLMDGPRQIMISKAINESDRLSSCHKGVRKLVERRDLLFNVFT
                     FKTIEDADAGGNADEFLMRYNISGVHISQAAFQKLRSEISLQGFDLQVPMIWRNSSVR
                     VYTGMVPLGQGMFHRIVVREGRVAHVDPRDFSLKRLTDQNYYEVCLHPRIYEAIENYQ
                     NTAAAAMAR"
     gene            complement(6551..8239)
                     /locus_tag="VE783_02700"
     CDS             complement(6551..8239)
                     /locus_tag="VE783_02700"
                     /inference="COORDINATES: protein motif:HMM:NF016289.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M28 family peptidase"
                     /protein_id="HYX52331.1"
                     /translation="MNKVASFVVLWLGVAVASPAQPKGNPAEIPQAAQAAMKNIDAEK
                     IRATVRYLADDKLQGRGTGQKGGDEAADWIAAQLKSYGVEPAGENGSFFQPVNFYGVT
                     TDGKQTQFAFVATKSNAVTDLKFAEDYVATDQTHSEKSEIDAPIVWVGYGIKAPEYNW
                     DDYKGVDLKGKVVLMLVNEPPSDDPNFFKGRALTYYGRWTYKYEEAARRGAVGAILIH
                     KTDMASYPWEVVRNSWGGETSLLQDDRDPKLKSAGWIQLEVARKLAQSAGMDLDQMLK
                     DANSKSFKPVELPVRLKETIVSKVRSFASRNVVGKVQGGDPKLKSQAVLYTAHYDHLG
                     IHPDESGDNIYNGAADNATGCGILLELARAFAESKVKPKRSVLFAAVTAEEQGLLGSK
                     YLGQHPPVPAKDISLDLNFDDIQPFGEPQQLVASGAERTSVYGTVQAVAKSFGMEIQP
                     DDHPEAGHYYRSDHFSLARVGVPAFSVNEGPLFKGHDVAWGEEKERDYVAHRYHQPAD
                     EYKPDMDFTADAKIARVGLAMGWEVANQPSLAGWKAGDEFEKARKGGSQASGSR"
     gene            complement(8344..8829)
                     /locus_tag="VE783_02705"
     CDS             complement(8344..8829)
                     /locus_tag="VE783_02705"
                     /inference="COORDINATES: protein motif:HMM:NF020123.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TlpA disulfide reductase family protein"
                     /protein_id="HYX52332.1"
                     /translation="MAGVQAPEISLKSMDGQPFSLKEALKKGPVIAAFYKVSCPVCQM
                     ALPYVDRLFQAYDKSGKLTIVGVSQDGVADTKAFNREFGVSFPVLLDEKGYPVSSAYQ
                     LTNVPTTFLISTGGEIETAIVSWSRAEMEELNQKLAAISGLAPAQLFRSSDRVPDFRP
                     G"
BASE COUNT         1821 a         2826 c         2356 g         1929 t
ORIGIN      
        1 ggacgcatcc aataatccgg ttgcaggcgc ttcgatcacc ttcgccgtga acggcacaaa
       61 cctcagtccg gcggccacca cgaatgcgag tggcgtcgct agtttctctt acaatccttc
      121 agcgctgcca gccagcgcga ctgcctattc cgtgggctca acgttctcgg ccgcgacgat
      181 tagcggacta tcgttcctcg gaagctccgc aaccggatcg ctgaccgtaa acaaagccac
      241 gccagtgatc acttgggcga atcctgcgga tattgctttt ggcacggctc tgagcacaac
      301 gcaactgaat gccacggcaa ctgccaatgg cgctgcggtg ccgggcgcct ttacctatac
      361 gcctgctgca ggaacagtac tgaacgcggg aacgaaccag accctgagtg tggattttgt
      421 cccgaatgac tccacgaact acaacagcgt gctgcacaca accgcgctca ttaatgtgct
      481 gaaagcgacg ccagctattt ctgtcagcgg cgggcccttc acttttgatg gcaccgggca
      541 tgctgccagc atcaccgtaa ctggagttgg cggagccgcc gtgagtggat caaccgccat
      601 cacctacaac ggcaatagcg tcgcacccat cgatgccggc acttacagcg tttcagtcag
      661 ctttaccagc gctgatccca attattcgaa caccacgggc agcggttcca tcgtgatcga
      721 taaagctgac agcgttacaa ctgtttctgg cagcttcaac tttacttacg acgcaactgc
      781 tcatcccgcg actgtaagcg tgaccggagc cggtgggctg agcctcaccc ctgatcccgt
      841 ttatagttgc ggtcacgcgc ctatcaatgt ggcggactca ggttgcaccg ccagcttcag
      901 cttcgccggc gatgccaacc acaacccgag ctcagactcg aaaacctaca ccattagtaa
      961 agccacgcct ctcgtcaccg taagcggcgg gccgtttact ttcgacggca atccgcgtac
     1021 cgccaccatc accgtaaccg gagttggcgg cgtaaccgtc accggcagtt cagcggtgac
     1081 ttacaacagc ctggcggcca taccggtgaa tgccgggacc tacgcggtcg cggtcagctt
     1141 caccagttca gacaataatt acggaaatgc gaatggcagc ggctccgtcg tgatcaacaa
     1201 agctgacagc atgacgactg tttccggcac attcagtttc acttatgacg caactccgca
     1261 tccggcgaat gtgagcgtga ccggagccgg cgggcttagc ctcacgcctg atccggctta
     1321 taattgcggt cacgcgccca ttaacgtggc ggactccggc tgcaccgcca gcttcagctt
     1381 cgcgggcgat aacaaccaca acccgagctc agactccaag acgtacacgg tcagcaaagc
     1441 gactccgctg gtaagtgtca gtggcgggcc ctttaccttt gacggcaatt cgcattctgc
     1501 caccatcgtg gttgcgggag ttggcggagt atcagtaacc ggcactttag ccgttacgta
     1561 caacggagtg gcagcgctgc cactcaatgc tggaacctac gcagtcggcg tgagcttcac
     1621 cagctcagat aacaactaca ctgacgccat gggctccggc tccatcgtga tcaacaaagc
     1681 tccgagcgta accaccgtct cgggaacttt cactttcact tatgacgcca ccgctcatcc
     1741 cgcaactgtg agcgtcaccg gagccggcgg gctgagcctc actcctgacc cggtttacag
     1801 ctgcggacac gcaccgatca atgtttctga cagtggctgc accgccagct acaacttctc
     1861 aggcgatgaa aatcacaacc cgagctctga ttccaggatg ttcacgatca ctaaagcgac
     1921 tccgctcgta agcgtcagtg gcgggccttt cacctttgac ggcaattcgc atcctgccac
     1981 catagtcgtt acgggagttg gcggaggctc tgtagccggc acttcagccg ttacgtacaa
     2041 cggagtggca acgctgccag tcaatgccgg cacctatgcc gtgggcgtga ccttcaccag
     2101 ttcggacaac aactacgaca acgcgagcgg ctccggttct atcctgatca acaaagccgc
     2161 atccgtgaca acggtttccg gcgttttcac ctttgtctat gacgccaccg cacatccagc
     2221 agccgtgtct gtgaccggtg ctggcggact gaatctcacg cctgatccgg tttatagctg
     2281 cggacatgcg ccgatcaacg tcgctgattc cggctgcacg gcaagttaca gcttccccgg
     2341 cgatgacaac cacaatccca gctctgattc caggacctac agcatcagca gggctactcc
     2401 tctggtcagc gtgaccggtg gcacgtttat tttcgacggg aacacgcatc cggccggagt
     2461 ggcagtcacg ggcgtgggcg gcgtaaatgt ttccggaact ctggtgctga cctacaacgg
     2521 tcttgcggcc ctcccgctga atgcaaactc atacgtcgtc tcggcgagtt tcaccagctc
     2581 agacaataat tacgataacg cgaccggtgc cggctccgtc gtaatcactc aggcgccgag
     2641 cgccaccact gtctccggcg tcttcagctt cacttatgac ggcaatccgc atccggcaac
     2701 cgtaagcgta actggtgcag gtggattgaa tctggctcct tcgccgctct atagctgcgg
     2761 gcacgttccc acagccgtag ccgattcagg ctgcatcgcc agctacaact acccgggcga
     2821 tatcaatcac gccgcgagtt ctgacgcaaa aacctacacg atcggcaaag ccactccggt
     2881 gctgaccatc aacccggtcg ctacgcttac catcggcaat ccggtgacca tcagcggcac
     2941 gcttaagttg ggcgccctga ttccgaccgg ctcagtcacc atcacgctga acggcgcgag
     3001 ccagactgca gcggtgggcg cgggcgggac attctccacc atattcccgg ccggcaccgt
     3061 cgacgtgggt agctttggcg tctcgggcat ctacccgggc gataccaact tcttcggcgc
     3121 cagcaacagc ggcctcgtaa cttttgcggt gcagtacggt gtctgctacc tctatgacca
     3181 gaccaaggcg gtgcagcaca acgccacagt gcccatcaag ctgcaactct gtgactcggc
     3241 cggccataat ctctccagct cggccgtcac agttacggcg acgagcgtgg cactgctgac
     3301 tggcgctacc ggcactctgg aagattccgg caacgccaat ccggatgaca acttccgtta
     3361 cgatcccacg cttcagggat acatctttaa cctcagcacc aagtcgctga acagcggaac
     3421 gtggcggctc tacttccgca catccaagga cgcgggaaca ggttcgccgt acatggcagg
     3481 atttggggtg agatagctcg aatttccttg caggaaaagt cggctcctgt tcgcgctgac
     3541 cggcgatctt tgcagtcatg caagtcgctg gcgtggcgga taggagccgg ttttatctcc
     3601 agttcgcaac cacccgcaca gtcggtctct cggtcaaatc agaaaactgg gaattgccga
     3661 gccagcgcaa agtagatcag ggcctgattt ccaccgccgt ccccacgggc acaagttgcc
     3721 aaatctcttc aatctcctga ttcgtcactg caatgcaccc cagcgtccag tcccgctgac
     3781 gatgcgccgc tcccagccac gcccaggctt gcggcaggcc atggatcatg atgtcgcctc
     3841 cgggatccac gcccagccgc cgcgcgcgct cgcggtccgc agcattggga tacgaaacat
     3901 ggagcgcgag atggaactgg ctgtgcgagt tccgcgaatc gatcttgtat tctccttccg
     3961 gagttttctc gtcaccctgt cgctctttgc cacccgtggg gctgccgccc agcgcgacct
     4021 tgtacgtctt gagcaccttc cccgcattca gcagcgtcat ggtacgcgag gatttcacga
     4081 tcacaattcg gtcggcaacc aggggcggct cagagcccgc agcaactatg agcgcaatgc
     4141 agagcaacac gccctgcact ggtcttctga ttttcatgac tgaagattgt aaactgaatt
     4201 gcggcgatca tcgcgccatt gcggctgctg cagtgttctg gtagttctca attgcttcgt
     4261 agatgcgcgg atgaaggcag acttcgtagt agttctggtc ggtaagccgc ttcagcgaga
     4321 agtcgcgagg atccacgtgc gccactcgcc cttcgcgcac cacaatgcga tggaacatcc
     4381 cctggcccag cggaaccatt cccgtgtaaa cgcgcacgct gctgttccgc catatcatcg
     4441 gcacctgcag gtcaaaacct tgaagtgaaa tctcgctgcg cagcttctgg aaggccgcct
     4501 ggctgatgtg gacgccgctg atgttgtagc gcatcaggaa ttcgtctgcg ttgccaccag
     4561 catcagcgtc ctcaatcgtt ttgaacgtaa acacattgaa caaaaggtcg cgcctttcca
     4621 ccagtttgcg gaccccctta tggcacgatg agagccggtc gctttcattg atggccttgg
     4681 agatcatgat ctgccgcggc ccatccatca ggtacatggg tgcggaatcc tgaaaagaaa
     4741 taccgatgcc gagctccagc gtgggcagcc catccgcaag cgaacgctcg ttgcaggccg
     4801 tgaccacttc aatgatctcc ttggcgagta cgcacgcctg cgccacgccc agggccggtt
     4861 cgccttcgtg ctccagcagc gccaggataa tggcatcgcc ctcaataaaa accttgcgtg
     4921 cgtcgtactt cggaagcagc ttgttaatag gatcgtagaa attcaggctg aaataagaag
     4981 cagggttcag tcctttttcg aacagagttc gtgtaagcgt ggtggactcg cggatatccg
     5041 ccttgatcac cacatgatgc agcaccttgt cttccgcagg cttttgctct tccggaagaa
     5101 gatattcata gagagtgttg ttgaccgccg aaagctcgcg gaatttctcg ctgcccagca
     5161 cgttcacttt ctcgaacgca gccagcacgg tctccatgcg gcgaagatca cgatgatacc
     5221 ggcagaaatc ggcgaaatat cgccctgcca gctttgcgcg ctccgccgga cgcgtgcctt
     5281 ccacccgtcg taccgccgcg tccagattct ctgttgagat cctgccctgc tcttccagca
     5341 gggaatccac ccgcttgcgt tctgctttat tgatgagcgc gctcttgagc tgctgtggat
     5401 tgatcgctgc cgaatactgc gtgagcagcg gaaccacttc gtaggaagca atcacgtgct
     5461 ccgtgactcc ggcttcctgc agaatgtcca cccatgcgcc caggatcgcg cgttgtgctt
     5521 tgccttttgg cgatgaatca tccggagcgc ccgccgccgt cagttcatgc gcattctctg
     5581 ccgagcttag cagtccatcc agccgggagt cttccgcgtc cacaaccaat gcaagcgcct
     5641 tgagcagccg ggccgcaatt tctcgcatac gctcaaagcg gtcagcatct cgctcatagt
     5701 tacccagcat cacgtagtgt tccgcgttga gaacgctgtc ctgcgcatct tcgctgaaca
     5761 acagccggtt tacgaacagt tcgtacacgg gagacccagc gtcccccatg agcgatctcc
     5821 gggttttccc caggctctct ttctcggcgt cgcgaactat gttgaacagg tcctgcccca
     5881 cacggcgcaa cacggcgcgt ttgttgactt gaaaccgcga caatctctcc cgcaattcca
     5941 tcgcgctgct catgccagag tggcgtggcc cttcgtaggc cttcatgcga gcgcgacaac
     6001 gctccagtac cagggtgtat tgggtcatga gttcggcgcg caagaatttc aggacggcga
     6061 gccggaaaag aagatcaagc gccacgcctc cctgcgattt cacctgcgtc agggccgaaa
     6121 ggtgaagctc aataaaaagg cgcttgaact cattggaatc gaagggcttt gtgccctgtg
     6181 cctgccgctc gcggatgcga gccggagtcc ctgccccaag ccgtgccgtt cgcggctctt
     6241 ctgccgccag gtcttccacc cctccatgcc gggcaataag tttataaagg tggtttcgag
     6301 cggcttccgt gaaacgcggg ctcaggaaca cgtcatgccg gacgttatca atcccagcaa
     6361 ccagcccttc aatggccagc gccggctcgt agctgttgag ggtcagctcg cggacgtggt
     6421 cagaaaggtt cccgcgttga agaaacgaaa atgccatttg ggcctgcccg ggcgcttggg
     6481 ggaagtagat tctaacccgg gcaggccaat gtacctacgt tacctttggc acctttcctt
     6541 atcgccgccg tcagcgcgac ccgctagcct gagagccgcc tttgcgggcc ttttcgaact
     6601 catcaccggc cttccagcca gccaggctgg gctgattcgc aacctcccag cccatggcca
     6661 gccccacgcg agcgatcttc gcgtccgcgg taaagtccat gtcgggctta tattcgtcag
     6721 ccggttgatg gtaacgatgg gctacgtaat cccgctcttt ctcctcgccc catgccacgt
     6781 catgtccctt gaacaggggt ccttcattca cgctgaacgc gggcacgccc acgcgggcca
     6841 ggctgaaatg gtcagatcgg taataatgcc ctgcctcggg atgatcatcc ggctggatct
     6901 ccatcccaaa gctctttgcc accgcctgca cagtaccgta aacgctggtc ctctccgctc
     6961 ctgaagctac gagttgctgt ggctcgccaa acggctggat atcgtcaaag ttcaggtcaa
     7021 gagaaatatc tttggccggc actggcggat gctgacctag atatttcgat cccagcagcc
     7081 cctgctcctc ggccgtcacc gcagcgaaca gcactgagcg tttcggcttc accttggact
     7141 ccgcgaacgc ccgtgccagc tccagcagaa ttccgcagcc cgtggcgttg tcggcggcgc
     7201 cgttataaat gttgtctccc gactcgtcag ggtgtatgcc cagatgatca taatgcgccg
     7261 tatagaggac cgcctggctc ttcagtttcg gatcgccgcc ttgcactttt cccacaacat
     7321 tgcgcgatgc aaacgagcgc accttgctca cgatggtctc tttcagccgc actggaagtt
     7381 ccaccggttt gaatgatttc gagttcgcgt ctttcagcat ctggtccagg tccatgcctg
     7441 ccgactgcgc cagcttgcgc gcaacctcca gttggatcca gcctgccgat ttcagcttcg
     7501 ggtccctatc gtcctgcagg agtgacgttt ctccacccca ggagttccgc accacctccc
     7561 acggatagct ggccatgtca gttttgtgga tcaggatggc gcccacggct cccctgcgcg
     7621 ccgcctcttc gtacttgtac gtccagcgcc cgtaatacgt aagcgcacgg cccttgaaga
     7681 aattcggatc atcagaagga ggctcattca ccagcatgag taccaccttg cccttcaggt
     7741 ccactccttt gtaatcgtcc cagttgtatt cgggagcctt gatgccgtaa ccaacccaca
     7801 cgattggggc atcgatctcg gatttttctg agtgggtctg gtcggtggcc acataatctt
     7861 cggcgaactt taagtccgtc accgcattcg attttgtcgc gacaaaagca aactgggtct
     7921 gcttgccgtc cgtcgtcacg ccgtagaagt tcaccggctg aaagaagctg ccgttctcgc
     7981 ccgcgggctc aacaccgtag ctcttgagct gcgcggcaat ccagtcagcg gcttcatcgc
     8041 cgcctttttg gcctgtgccg cggccttgca gcttatcgtc ggcaagatat ctcacggtgg
     8101 cgcgaatttt ttctgcgtca atgttcttca tggcagcctg cgctgcctgg ggaatctcag
     8161 caggattgcc tttcggctgc gcgggcgaag cgaccgccac tcccagccac aacacaacaa
     8221 acgaagcgac tttgttcata gctcctcatt gacgaaaacg caatagtagc tcggtcttcg
     8281 ggactaaaac tcttctggaa attgctctac gtgtgccacc accggcggct aattctttga
     8341 ttctcaacca ggacgaaaat ccggcacccg atcacttgaa cggaacagct gcgccggcgc
     8401 gagaccgctg atcgcggcaa gcttttggtt cagttcttcc atttccgctc ttgaccagct
     8461 cacgatggcg gtctcgattt cgccaccggt tgaaatcaaa aaggtcgtcg gcacgttggt
     8521 cagttggtag gcgctcgaaa ccgggtaacc cttttcgtcc agcaggaccg gaaaactcac
     8581 tccgaattcg cgattgaacg ctttcgtgtc tgccacgcca tcctgcgaca cgccaacaat
     8641 cgtcagctta ccgcttttgt cataagcctg aaaaagcctg tccacgtagg gtagcgccat
     8701 ctgacagacg gggcagctca ctttgtagaa cgccgctatc accggccctt tcttcaacgc
     8761 ttctttcaag gaaaacggct ggccgtccat tgatttcaaa ctgatctccg gcgcctggac
     8821 gccggccatg agtgcaggca tttgcggccc tccacgggtg acacatcatt gtaaaagacg
     8881 gcaggattgc tccgcacctg tagtcccgcc tggcttgttt accggtctgc gg
//
LOCUS       DASQYP010000082         3244 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_68443, whole genome shotgun sequence.
ACCESSION   DASQYP010000082 DASQYP010000000
VERSION     DASQYP010000082.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 3244)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3244)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3244
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_68443"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            167..1213
                     /locus_tag="VE783_02710"
     CDS             167..1213
                     /locus_tag="VE783_02710"
                     /inference="COORDINATES: protein motif:HMM:NF014325.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="potassium channel protein"
                     /protein_id="HYX52333.1"
                     /translation="MNGWSAMPLNLQRFRLLKIFLIALLVLGFAGTAGFHYIEHWPWF
                     DCFYMVITTFTTIGYQEVHPLSHAGRVFNSFLIIAGVSLVFMMIGALTQALLEFELGK
                     VFGRRRMEREVAGLKNHYIICGAGRVGHSVAAELARKPCPFVVIESGEKAAAELDPKW
                     PVITGDAASEKVLREAGIDRALGLVAATTTDATNIYIVLTARSLNPRLKIIARASEER
                     AGKHLKTAGADAVISPYAAAGHRIAQSFLRPKVLDFLDIATARSGTFEMIIEEIRVSE
                     GSSLASATVGSSGIHHQFGIMILAIRHVDGDTRFNPNAQDPICAGDYLIAMGEPAQLV
                     KLEALASATVTATP"
     gene            1210..3021
                     /locus_tag="VE783_02715"
     CDS             1210..3021
                     /locus_tag="VE783_02715"
                     /inference="COORDINATES: protein motif:HMM:TIGR00196.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0052855 - ADP-dependent NAD(P)H-hydrate
                     dehydratase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-hydrate dehydratase"
                     /protein_id="HYX52334.1"
                     /translation="MKIVTAAEMREIDRLTTERFSVPSLTLMENAGTAVAEFAQKHFE
                     FKTVCVVCGKGNNGGDGLVAARKLHEAGKQVSVIVLAKSGEELRGDAAEMFKKLALTP
                     IWASEEADFDKAELQQALKAELIVDAILGTGFKPPIKGVAEKAVVLINELDHAQVLAI
                     DVPSGIDADIHSKPARESVFVGANAIISFTAPKPALVYAELTDGPIAVAQIGSPVNLV
                     VSQAELNQDVLTAQEFQSLKKKREPDDHKGVFGHVLIIGGSVGKAGAAAMAGLAALRV
                     GAGLVTVACPKSVQPTIAAFAPELMTEPLDETDEGSIAVLALRKREELLAGKTLIVIG
                     PGLSRNKETEEFIRDFVGICPVHMVIDADGLNAFEGSMEELQPDESSEMGLVRVLTPH
                     PGEMARLLGIESHAVQASRIRMALRAATQSSCTVVLKGNRSVVASPSGYVWINTTGNP
                     GMAKGGSGDVLSGILGGMLVQNPHIPGMLGWRAEVDADQDIGFPAIQGIFNFLTKNQT
                     QVEIQKLAEEYKKSNNPALREQIQSKMHPQLIEFLGLLGSLHVARGVFLHGLAGDVAR
                     DLVGEDSMIASDIIESLGEALAVCEAEAGEKFAYIQR"
     gene            3018..>3244
                     /locus_tag="VE783_02720"
     CDS             3018..>3244
                     /locus_tag="VE783_02720"
                     /inference="COORDINATES: protein motif:HMM:NF014426.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0002949 - tRNA threonylcarbamoyladenosine
                     modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     ATPase subunit type 1 TsaE"
                     /protein_id="HYX52335.1"
                     /translation="MTSYETHSAEETTALGREITRELKPGSIVLLRGDLGAGKTTMVK
                     GIAEGFHAAEAEAVTSPTFTLIHEYRGPEVTL"
BASE COUNT          735 a          850 c          993 g          666 t
ORIGIN      
        1 ggcatcacat ccgggtgcag agggggacag cctagatcgg gagatcggga gatccgagcg
       61 agagctcatt acgagttacc agcatttctc agtgtgtccg tgtgtcggtg gtgagtgttt
      121 gagcttgtaa tgacaatcac atcgcccacc atcagcgtgg tctaatatga acggctggtc
      181 tgccatgccg ctcaaccttc aacgctttag gctgctgaag atctttctta ttgccctgct
      241 ggtgctcggc ttcgcaggca ccgcgggatt tcactacatt gagcactggc cgtggttcga
      301 ttgcttttac atggtgatca ccacgttcac caccatcggc taccaggagg tgcatccgct
      361 ctcgcacgcg gggcgggttt tcaattcttt cctgatcatc gctggcgtgt cgctggtctt
      421 catgatgatc ggagcgttaa cgcaggcttt gctagaattc gaattaggga aggttttcgg
      481 aaggcgccgt atggaacgcg aggtcgccgg gctaaaaaac cattacatca tttgcggcgc
      541 agggcgcgtg ggccacagcg tggccgccga actggcgcgc aagccctgcc cgttcgtcgt
      601 cattgaatcc ggcgagaagg cggctgccga actggatccc aaatggcccg tgattaccgg
      661 cgatgccgcc agcgaaaaag tcctgcgcga agcgggaatt gacagggcgc ttggactggt
      721 tgccgccacc accacggatg caaccaacat ctatattgtg cttactgcgc gcagcctgaa
      781 tccgcgtttg aaaattattg cccgcgcgag tgaagagcgc gcgggaaagc acctgaagac
      841 cgccggggct gacgcggtga tttctccgta tgccgccgcc ggacaccgca tcgcccagag
      901 cttcctccgg ccgaaggtac tcgacttcct cgatatcgcc actgcccggt ccggcacttt
      961 tgaaatgatc attgaagaga tccgggtgag cgaaggctcg tctctggcga gtgcgacggt
     1021 gggcagttca ggaatccatc atcagttcgg catcatgatt ctggcaatac ggcacgtcga
     1081 tggcgatacc cgcttcaatc ccaatgcgca ggacccgatc tgcgccggcg attacctgat
     1141 tgccatgggc gagcctgcgc aactggtcaa gctggaagcg ctggcgagcg ccacagtcac
     1201 cgcgacccca tgaaaattgt cacagccgca gagatgcgcg agattgaccg gctaactacc
     1261 gagcgcttca gcgtgccctc gctcacacta atggagaacg ccggcacggc cgtggctgag
     1321 ttcgcacaga agcatttcga attcaagacc gtgtgcgtgg tgtgcggcaa gggcaacaac
     1381 ggcggcgacg gcttggtggc cgcgcgcaag ctgcatgaag caggcaaaca ggtttccgtg
     1441 atcgtgctgg cgaagtctgg ggaagagctg cgcggcgacg cggccgagat gttcaagaag
     1501 ctcgcgctca cgccgatttg ggcgagcgaa gaagctgact tcgataaagc tgaactgcag
     1561 caggcgctca aagctgagct gattgtggat gcaatcctgg ggacaggatt caagccgccg
     1621 atcaaaggtg tggcggaaaa ggccgttgta ttgatcaatg aacttgatca cgcgcaggtc
     1681 ctcgcgattg atgttccctc cgggatcgac gcggatattc attcaaaacc agcaagagaa
     1741 tcggtctttg ttggcgcgaa tgcgatcatc tcatttacgg cgccgaagcc ggccttggtc
     1801 tacgccgaac tgacagatgg gcctattgcg gtcgcgcaga tcggatctcc tgtgaactta
     1861 gttgtgtcgc aagcggaact gaaccaggac gttctaactg cacaggaatt ccaatcgctt
     1921 aaaaagaagc gggagcccga cgaccacaaa ggcgttttcg gccacgttct gataatcgga
     1981 ggctcagttg gcaaagcagg agcagcggct atggcgggac tcgctgcttt gcgagttggt
     2041 gcggggctgg tgaccgttgc atgtccaaaa tcggtacagc ccactattgc cgcttttgct
     2101 ccggagctaa tgacagaacc gttggatgaa acagacgagg gttcgattgc ggtgctggca
     2161 ctgcgcaaaa gggaagagct gctggcgggc aaaacgctca tagtgatcgg tccgggcctg
     2221 tctcgcaaca aggagaccga agagttcatt cgcgattttg tgggaatctg cccggtgcac
     2281 atggtgattg atgcagatgg cctgaatgca tttgaaggaa gcatggaaga gctgcaaccg
     2341 gacgagtcca gtgaaatggg actggtaaga gtattaacgc ctcatcccgg tgagatggcc
     2401 cgcctgctcg gaattgaatc gcacgcagtt caggccagcc gaatcagaat ggctcttcgt
     2461 gctgccacac agtccagttg cacggttgtt ctgaaaggaa atcgcagcgt tgtcgccagc
     2521 ccgagtgggt atgtctggat caacacgact gggaatccgg gaatggcaaa gggaggttct
     2581 ggagatgtgc tttcgggaat tctgggcgga atgctggtgc agaatcccca catccctggg
     2641 atgcttggct ggcgagccga agtagatgct gaccaggaca tcgggtttcc cgcgatacag
     2701 gggatattta atttcttaac gaaaaatcag acgcaggttg agattcaaaa gcttgccgaa
     2761 gaatacaaaa agagcaataa cccggcgtta cgcgagcaaa tacagtcgaa gatgcaccca
     2821 cagttgattg aattcctggg cctgctgggc tcgctgcatg ttgcgcgcgg agttttcctc
     2881 cacggtttag caggcgacgt tgcgcgcgat ctggtaggag aggactcgat gatagcaagc
     2941 gatatcattg aatctcttgg cgaagcgtta gccgtttgcg aagccgaagc aggagaaaaa
     3001 ttcgcctaca tccagcgatg accagctacg aaacccactc agccgaagag accaccgctc
     3061 tagggcgcga gatcacgcgt gagctgaagc caggcagcat tgtgcttctg cgcggcgatc
     3121 tgggagcagg gaagacgacg atggtgaagg gcatcgcgga aggctttcac gcggctgaag
     3181 ccgaggccgt gaccagcccg acgttcacgc tcatccatga atatcgcgga cctgaagtga
     3241 cgct
//
LOCUS       DASQYP010000083         2181 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_277742, whole genome shotgun sequence.
ACCESSION   DASQYP010000083 DASQYP010000000
VERSION     DASQYP010000083.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 2181)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2181)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2181
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_277742"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(103..1506)
                     /locus_tag="VE783_02725"
     CDS             complement(103..1506)
                     /locus_tag="VE783_02725"
                     /inference="COORDINATES: protein motif:HMM:NF013646.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent monooxygenase"
                     /protein_id="HYX52336.1"
                     /translation="MNIVCLGGGPAGLYLSILLKKAKPAWDIKVVERNRPTDTFGWGI
                     VFSDKTMDGFRAADEETHAEITRSFRHWDDIDVFFKGRKITSGGHGFCGIARIRLLNI
                     LQKRAAELGVKLIFETEITDPDEYAAHYDLVIASDGASSITRRKYEHVFRPNIQVRNN
                     RFVWLGSRKKLDAFTFDFAETQHGWFNLHAYRFDEEWSTFIVETPEKNWLAAGLDQME
                     QEEAIAFCEKLFEDRLEGSRLVSNANHLRGSAIWLKFNRVLCEKWFHKNIVLIGDAAH
                     TAHFSIGSGTKLAMEDAMALSRVLTTHEGDVTAALQRYQEEREIEALKLQSAARNRME
                     WFEQVERYVHLEPEQFTYSLLTGSQRVGHENLKLRDSCYVKNVEAWFARRTGITHPLP
                     PMFTPICIRGLKLKNRVVVSPMATYMAEDGIPNDFHLVHLGARAMGGAAIVFTEMTCV
                     SPEGRITPGCPGMWNDQ"
     gene            complement(1503..>2181)
                     /locus_tag="VE783_02730"
     CDS             complement(1503..>2181)
                     /locus_tag="VE783_02730"
                     /inference="COORDINATES: protein motif:HMM:NF042682.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF6537 domain-containing protein"
                     /protein_id="HYX52337.1"
                     /translation="GKSGNFALLRETARYLALWMSYEDAIRVADLKIRRNRFEQVRKD
                     AHVKDDQLVLINEFLHPRVEEFADIMPASIGGWLVNTTWARDLVNRLNKNGKVLNTSS
                     ISGFLQLYLVAGLRRWRRGALRFRRESRRIASWLGQIRELASSDYALACEVAECPHLI
                     KGYGDTYLLGSRNFETLMSVISSLRRSPDAATRLRSLREAALADDTGSKLAERLREFN
                     LLPGGSS"
BASE COUNT          449 a          648 c          631 g          453 t
ORIGIN      
        1 cgagcgcgtt gaacctttgc gcccggaatg gccgacctgg aaagcgacct tcgcgtcgga
       61 gttgctgtgg atgaagtcaa caatgcgctt ccacgccagc tcctactgat cgttccacat
      121 gccaggacag ccaggcgtaa tacgaccctc cggagaaacg caggtcatct ccgtaaagac
      181 aatggccgca ccacccatgg cgcgcgcgcc gagatgcacc agatggaagt cgttcgggat
      241 gccgtcctcc gccatgtaag tcgccatggg cgagaccacc acgcgattct tgagcttcaa
      301 tccgcgaatg catatgggtg tgaacatcgg cggcagcgga tgcgtgatac cggtgcgccg
      361 tgcaaaccac gcttccacgt tcttcacgta acaggagtca cgcagtttca gattctcatg
      421 gcccacgcgc tggcttccag taagcagcga ataagtgaat tgctccggct ccaggtggac
      481 gtagcgctcc acctgctcaa accactccat gcggttacgc gctgcgctct ggagcttcaa
      541 ggcttctatt tcgcgttctt cctggtagcg ctgcagcgct gctgtcacgt cgccttcatg
      601 tgtggtcagc acgcgcgaga gcgccatcgc gtcttccatg gccagcttgg tcccggagcc
      661 gatgctgaag tgcgcggtgt gcgccgcatc gccaatcagg acgatgttct tgtggaacca
      721 tttctcgcag agcacgcggt tgaatttgag ccagatggcc gatccgcgca ggtgattggc
      781 gttggagacg agtctgctgc cctccaagcg gtcttcaaaa agcttttcac agaaggcgat
      841 tgcttcctcc tgctccatct ggtccaggcc ggcggccagc caatttttct ccggcgtttc
      901 cacgatgaac gtggaccact cttcgtcgaa acgataggcg tgcaggttga accagccgtg
      961 ttgggtctca gcgaagtcga aggtgaaggc atcaagcttt ttacggctgc ccagccagac
     1021 aaagcggttg ttgcgcacct gaatgttcgg ccggaatacg tgctcgtact tgcgacgcgt
     1081 gattgacgaa gcgccgtcgg aggcgatcac cagatcgtaa tgcgcggcgt actcgtccgg
     1141 atcagtgatc tcggtttcaa agatcagctt tacgcctaac tccgcggccc gcttctgcag
     1201 gatgttcagc agcctgatcc gcgcgatgcc gcaaaaaccg tgcccgccgg aggtgatttt
     1261 gcgccccttg aagaacacgt caatatcgtc ccaatgccgg aacgagcgag taatttcggc
     1321 gtgcgtctcc tcatccgcag cgcggaagcc gtccatggtt ttatctgaga aaacgatgcc
     1381 ccagccgaag gtatccgttg ggcggttgcg ctcaacgacc ttgatgtccc acgccggctt
     1441 cgctttcttc agcaatatgg agaggtacag ccccgcgggg ccgcctccca gacagacaat
     1501 gttcaacttg aacctcccgg aagaaggttg aattcgcgca gccgttcggc gagtttggaa
     1561 ccggtgtcgt cggccagcgc ggcttcgcgc aacgaacgaa gccgcgtggc agcgtccggc
     1621 gaacggcgca gggatgagat cacgctcatg agtgtttcaa aattacgact gcccagcagg
     1681 tatgtgtcgc cgtagccttt gatcaggtgc ggacactcgg cgacttcaca cgcaagcgcg
     1741 tagtccgaag acgcaagctc cctgatctga cccagccatg aagcgatgcg gcgggactcg
     1801 cggcggaagc gcagcgcgcc acgccgccag cgacgtagtc ctgcaaccaa gtagagttgg
     1861 agaaagccgc tgatggagct ggtgttcagg accttaccat ttttgttcag gcgattcacc
     1921 agatcgcgcg cccatgttgt gtttacaagc cagccgccaa ttgaagcagg cataatgtca
     1981 gcaaattcct ccacccgggg atgaaggaat tcattgatca gcaccagctg atcatcttta
     2041 acgtgtgcgt ctttgcgtac ctgctcgaaa cggttgcgcc ggatcttgag gtcggccacg
     2101 cgaatggcgt cttcatagga catccagagc gccagatagc gggcggtctc gcgcaacagc
     2161 gcgaaattgc cactcttgcc g
//
LOCUS       DASQYP010000084         4074 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_150833, whole genome shotgun sequence.
ACCESSION   DASQYP010000084 DASQYP010000000
VERSION     DASQYP010000084.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 4074)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4074)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4074
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_150833"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..896)
                     /locus_tag="VE783_02735"
     CDS             complement(<1..896)
                     /locus_tag="VE783_02735"
                     /inference="COORDINATES: protein motif:HMM:NF014375.4"
                     /note="Presence of a B(12) (cobalamin)-binding domain
                     implies dependence on cobalamin itself, in one of its
                     several forms, or in some unusual lineages, dependence on
                     a cobalamin-like analog; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0031419 - cobalamin binding [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cobalamin-dependent protein"
                     /protein_id="HYX52338.1"
                     /translation="MPLKTLFLNPPSFENFDGGASSRWPATREIESYWYPVWLAYPAG
                     MLEGSRLLDAPPHHVSAEETIELGKQYEFLVLFTSTPGFPGDIKLVTKMKEANPKLKI
                     AFVGPHVTTLPERSLNECKAIDFVCRREFDYSTVEFANGKPLGEILGISYRDASGKVV
                     HNPDRPDVTDLDALPNVTDVYYRDMDVRRYNVPFLLHPFVALYTTRGCPAQCTFCLWP
                     QTLSGHPWRKRSTDAVAREMAQAKEYWPWVKEYFFDDDSFNIQKARTIELCQKLKPLN
                     LTWSCTSRVTTDYETLKAQREAG"
     gene            complement(1042..1626)
                     /locus_tag="VE783_02740"
     CDS             complement(1042..1626)
                     /locus_tag="VE783_02740"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52339.1"
                     /translation="MNEYQQLLPEFIASFEKLDDMVIFDDTDAALSGLLTGQVDEYGR
                     KIWRPLKEETPRESLSELYQQLPARFPKMYERLVLSYRWAEVEIGPCKLLANPPGPDL
                     TGLLPRIQRNPALWEALVPAGYLQFAKGPDIDYDPVCFDLKSRNKNGNYRLVKIDHEE
                     ILCNYRVTVVGEIASSFEELMRETIRLGKESSGK"
     gene            complement(1677..3251)
                     /locus_tag="VE783_02745"
     CDS             complement(1677..3251)
                     /locus_tag="VE783_02745"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52340.1"
                     /translation="MATMDAPPQVLPRSGQASRRARWLKIAGVVVLGILAALIFVLAL
                     KWPFSREAMLKRLEHATSGRVEFGKFSSKYFPPGCVAEDVRLYQQRNQTKLPDGEKSE
                     PLIRVERLTISTGYAALLRKHIEKIVAEGAVVHIPHGGAELKSSSGKKNDVTIGDLEA
                     DNSVLELAPEKRGEKPMVFKVRRARFRNVGNGDTSAYDVALSVPLPRAEVESKGWIGP
                     WRDANGDVRSTPISGEYAVRNLDLGSFDSMMGMVSSHGEFQGTLAKLNVSGESESPDF
                     GVKESGHHFPLSTKFRGTVDLASGDVELPVLTAKLGSLTLEADAQITGKPKTVQLNVK
                     RGRGEVQDLMLLFSDKPKSPIAGPITFQMRSSLPPEKRPFKQRVQLVGNFDVDPARFT
                     EDDTEDNVAKLSAHARGDKKEMDKDEPPPVLSNLRSDVRLANGEAHFTNLSFSVPGAT
                     ANMEGTYELTDKKVNLQGKMKMQAKLSEATKGVKSFFLKLLNPFFKKKNAGAELPVAM
                     TGKYGHTHFSVGLTKK"
     gene            3303..>4074
                     /locus_tag="VE783_02750"
     CDS             3303..>4074
                     /locus_tag="VE783_02750"
                     /inference="COORDINATES: protein motif:HMM:NF013328.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003906 - DNA-(apurinic or apyrimidinic
                     site) endonuclease activity [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0019104 - DNA N-glycosylase activity
                     [Evidence IEA];
                     GO_process: GO:0006284 - base-excision repair [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-formamidopyrimidine glycosylase family
                     protein"
                     /protein_id="HYX52341.1"
                     /translation="MPELPDIAVYIEALEQRTLGHTLERVLLAGPSLLRTATPPVQAA
                     EGRKVIAIRRIGKRIAFGLEGDLWLVLHLMIAGRLHWSDKRKVPDGRRVLAAFDFDSG
                     QLTLTEAGTSKRASLHVLGSSAELEKLNPGGINVLSVSLDRFAQVLTANNHTLKRSLT
                     DPHYFSGIGNAYSDEILHRARLSPVALTQRLTPEEISRLYHAARATLAEWTDRLLADS
                     KGKFPEKVTAFRPEMAVHGRYGQPCPVCGTKVQRIRYAA"
BASE COUNT          793 a         1345 c         1049 g          887 t
ORIGIN      
        1 ccggcttcgc gctgtgcttt cagtgtttcg taatcagtcg tcacccgcga cgtgcaactc
       61 cacgtcaggt tcagcggctt gagcttctgg cagagctcaa tcgtgcgcgc tttctggatg
      121 ttgaaggaat cgtcgtcaaa gaaatattcc ttcacccacg gccagtattc tttggcctgc
      181 gccatctcgc gggccaccgc gtcggttgaa cgcttgcgcc acggatgccc gctgagcgtc
      241 tgcggccaca ggcagaaggt gcactgcgcc gggcagccgc gcgtcgtata tagcgcaacg
      301 aatggatgca gcaggaacgg cacgttgtaa cggcgcacgt ccatgtcgcg atagtaaacg
      361 tccgtcacgt tcggcagagc gtccagatcg gtcacgtccg ggcgatcagg attgtggacg
      421 accttgccgc tcgcgtcgcg atagctgatt cccaggattt ccccaagcgg cttgccgttg
      481 gcaaactcaa ctgtcgagta atcgaactca cgccggcaga caaagtcgat tgccttgcac
      541 tcgttcagcg aacgctccgg cagcgtggtc acgtgcggcc ccacaaatgc gatcttcagc
      601 ttcgggttcg cctccttcat cttggtcacc agctttatgt cgccggggaa gccgggcgtg
      661 gaggtaaaca ggaccaggaa ctcgtactgc ttgcccagtt caatggtctc ctccgccgaa
      721 acatggtgtg ggggcgcatc cagcaggcgc gaaccctcca gcataccggc cgggtaggcc
      781 agccataccg gataccagta agactcaatc tcacgggtgg ctggccagcg cgagctggcg
      841 ccgccatcaa agttctcaaa cgacggggga ttcaggaata gcgtttttaa tggcatgatc
      901 gtgagttctt attctaacat cccggctttg gccctaaatc ccagctaatc caagcggtta
      961 caggtaaccc ctgagtggcg aaatggtgca gggaacgggg gcgactgagc tctggtaagc
     1021 tgagtcccaa gtttctggat ctcatttccc gctactctcc tttcccagcc ggatcgtctc
     1081 cctcatcagc tcttcaaaac tggacgcaat ctcacccacc actgttaccc gatagttgca
     1141 cagaatctcc tcatggtcga ttttgacaag ccggtaattc ccgttcttat tccgcgactt
     1201 caggtcgaag cagaccgggt cgtaatcgat atccgggcct ttcgcgaatt gtagatatcc
     1261 tgccgggacc aacgcttccc atagcgcggg attgcgttgt atccgtggaa gcaatccggt
     1321 taggtcagga ccagggggat tggccagcag cttgcacggc ccaatctcca cttcagccca
     1381 tcgatacgag agcactagtc gctcatacat tttgggaaag cgagcaggca gctgttgata
     1441 aagctcgctc agagattcgc gcggcgtttc ctccttcagc ggtctccaaa tctttcgacc
     1501 gtattcatcc acctgtcccg taagaagccc tgatagtgcc gcatcagtgt catcgaaaat
     1561 caccatgtca tcgagcttct caaaactcgc aataaactcg ggcaacagct gttggtactc
     1621 gttcatgtga caggaattta agaaatgtca ccccagccca gcaactcccg agagttctac
     1681 tttttcgtca gccccacact gaaatgcgta tgcccatact ttcccgtcat cgccaccggc
     1741 aattctgccc cggcgttctt cttcttaaaa aagggattca gcagcttcag gaaaaacgac
     1801 ttcacgccct tcgtggcctc ggagagtttt gcctgcatct tcatctttcc ttgcagattc
     1861 actttcttgt ctgtcagctc ataggtgcct tccatgttgg ccgtagctcc gggaacgctg
     1921 aagctcaggt tcgtgaaatg cgcttctccg ttggccagcc tcacatcgct tcgcaggttt
     1981 gagagcacgg gcggtggctc gtctttgtcc atctcttttt tgtctccccg agcatgcgcg
     2041 ctcagcttgg ctacattgtc ctcagtatcg tcctcggtaa atcgtgccgg atctacatca
     2101 aagttcccga ccagctgcac ccgttgcttg aacggacgct tctccggcgg caaactagac
     2161 cgcatctgga acgtgatcgg gcccgcaatc ggcgatttcg gcttgtcaga aaacagcagc
     2221 atcagatcct gaacttctcc gcgtccgcgt ttcacgttga gctgcaccgt tttcggtttg
     2281 cctgtgatct gcgcgtcggc ctccagcgtc aggctgccca gcttcgcggt cagcaccggc
     2341 aattcaacgt caccgcttgc gagatccacc gtcccgcgga acttcgtgct cagcggaaag
     2401 tggtgcccac tctccttcac cccgaaatcc ggcgactcgc tctcgccgct cacgttcaac
     2461 ttcgccagcg tgccctgaaa ctccccatga gagctgacca ttcccatcat gctgtcaaaa
     2521 gagccaaggt ccaggttgcg caccgcgtac tcgcctgaaa tcggtgtact gcggacatct
     2581 ccatttgcat ctcgccacgg cccaatccag cccttggact caacctcagc ccgcggcagc
     2641 ggcacagaga gagcaacatc ataggcggag gtgtcgccgt tccccacgtt cctgaaccga
     2701 gctcgacgca ccttgaacac catcggcttc tcgcctcgtt tctccggcgc cagctccagc
     2761 acagagttat ccgcctccag gtctccaatc gtcacgtcat ttttctttcc gctgctcgac
     2821 ttcaactcgg ccccgccatg cggaatatgc accacagccc cctcggccac tatcttctca
     2881 atgtgcttcc gcagcagcgc agcgtagccg gtgctgatcg tgagtctctc tacccggatc
     2941 agcggttcgc tcttctcgcc gtccggcagc tttgtctggt tccgttgctg gtacaaccgg
     3001 acatcttcag ccacgcagcc tggcggaaaa tatttgctac tgaatttccc gaactccacc
     3061 cggcctgacg ttgcgtgctc cagccgcttc agcatggctt cacggctgaa cggccacttg
     3121 agcgccaata caaaaatgag agccgccaaa atcccgagca ccaccacacc ggcaatcttc
     3181 agccagcgcg cgcggcggct cgcctgaccg gagcgtggca aaacctgcgg aggtgcatcc
     3241 atcgtggcca tgcttattgg atgcagcctt gttcgcgccc agccgtgtac catatcccgt
     3301 gcatgcctga gctgcccgat atcgccgtct atatcgaagc gcttgagcag cgcacgctcg
     3361 gccacactct ggaacgcgtg ctgctcgccg gcccgtcatt gctgcgcaca gccaccccgc
     3421 cggtgcaagc tgcggaaggc cgcaaggtca tcgccatccg ccgcatcggc aagcgcatcg
     3481 cattcggtct tgagggcgac ctctggctcg tcctgcacct catgattgcc ggccggctgc
     3541 actggagtga caagcgcaaa gtccccgacg gccgccgcgt cctcgccgcc ttcgatttcg
     3601 actccggcca gctcacgctc accgaggccg gaacctcgaa gcgggcctcg ctgcacgtgc
     3661 tcggcagcag cgccgaactt gagaagctca atcccggcgg catcaacgtg ctctccgtct
     3721 cactcgatcg cttcgcgcag gtacttaccg ccaacaatca cactctcaag cgctcgctta
     3781 ctgatccgca ctacttcagc ggcatcggca acgcatattc tgacgagatc ctgcatcggg
     3841 ctcgactctc gccggtagcg ctcacccagc ggctcacgcc cgaagagatc agccggctct
     3901 accacgccgc ccgcgccacg cttgcggagt ggactgaccg cctcctcgcc gattccaaag
     3961 gcaagttccc agagaaggtc accgcctttc ggcctgagat ggccgtccac gggcgctacg
     4021 gccagccctg ccctgtgtgc ggcaccaaag ttcagcgcat ccgatatgcc gcca
//
LOCUS       DASQYP010000085         5756 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_173817, whole genome shotgun sequence.
ACCESSION   DASQYP010000085 DASQYP010000000
VERSION     DASQYP010000085.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 5756)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5756)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5756
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_173817"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1143)
                     /gene="sucC"
                     /locus_tag="VE783_02755"
     CDS             complement(<1..1143)
                     /gene="sucC"
                     /locus_tag="VE783_02755"
                     /EC_number="6.2.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019902207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-forming succinate--CoA ligase subunit beta"
                     /protein_id="HYX52342.1"
                     /translation="MKIHEYQAKTILAKYGVAIPRGEMALTREEAESAAKRLFDAGAK
                     GVVVKAQIHAGGRGKGGGVKVSKSLDEARNWSDKILGMKLVTHQTGPEGKIVQRLLIE
                     ETLPIERELYLGIVVDRATALPVFMASAAGGMEIEEVAAKDPNAILKQAIDPVTGFQP
                     YHARKLAFGLGLKAEQINEAVKFMTGLYRAFVETDASLMEINPFITTTDGRLFALDAK
                     MNFDDNALFRHKDLKELRDINEEDPLEVEASKYSLNYIKLDGNIACMVNGAGLAMATM
                     DIIKYAGGSPANFLDVGGGANAEQIRHAFEILLSDKHVKAILINIFGGILRVDTLANG
                     VVEAARATNLKLPLVLRLEGTNVEQGREILNKSGLNFQVAETMKDAA"
     gene            1396..2139
                     /locus_tag="VE783_02760"
     CDS             1396..2139
                     /locus_tag="VE783_02760"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HYX52343.1"
                     /translation="MNPADNTVLITGGASGIGLALAQRFLKAGSRVIICGRRQEKLRE
                     AAAVSPGLITRVCDVGSEADRVALAEWVVREYPALNVLVNNAGIQRRGVDLSNAERWP
                     DTHSEIAINLEAPIHLTGLLTPHLRRQANAAILNVTSGLSFVPIAYMPVYCATKAALH
                     SITLSLRRQLTNTPVKVIEIIPPAVNTDLGGPGLHTFGVPLDEFADAVMQRVATGELE
                     IAYGFAEQASKASRAELDEHFERLNQPRG"
     gene            complement(2145..2615)
                     /locus_tag="VE783_02765"
     CDS             complement(2145..2615)
                     /locus_tag="VE783_02765"
                     /inference="COORDINATES: protein motif:HMM:NF025887.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HYX52344.1"
                     /translation="MNFSVAAVLLLTTTGFFAQKTATPSGAPGEIKNALLRIEQEIGQ
                     ANLNCDYRYFERIEAEEFIFTDSQGRTSNKPEDLAGEKDCHRSDATYDLDDTDVRLYP
                     AAAVVTGRVTITRKKEGTSIVRRSRFTDVFVWRDNQWQLVAGHSSRIPDAAVPK"
     gene            2711..3853
                     /locus_tag="VE783_02770"
     CDS             2711..3853
                     /locus_tag="VE783_02770"
                     /inference="COORDINATES: protein motif:HMM:NF012382.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HYX52345.1"
                     /translation="MNFQNFELEYFQSQFERTVEDNLADSSVKCASVRELLGEESPED
                     LINLPLYYPEVNGTTLLRERIAALYPQAQAKNVLVTVGAAQANWMICQSLLEPGNEVI
                     VVSPGYRQVWGLAKNLGCRVKEVSLRPENDWRLDLDELEVAATADTKLISVVNPNNPT
                     GSILTPEEMRRVVAICARHGSWLHADEVYCGTELEGPETPSFWGMYDRMICVNSLSKA
                     YGLAGLRIGWAVASPEMIEELWRRHEYAVIAASGPSMKLAEIAVVPEKRRMLFDRQKK
                     LSREGHKILRDWVSTQEGRFFVSKATATSIAFVGYSAGLPSEELADYIRRQASVLVAP
                     GSYLGRDGYLRITVGYEPEKVRTALSRIGEVVAQFATASAMGYGRR"
     gene            3840..4625
                     /locus_tag="VE783_02775"
     CDS             3840..4625
                     /locus_tag="VE783_02775"
                     /inference="COORDINATES: protein motif:HMM:NF006108.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="crotonase/enoyl-CoA hydratase family protein"
                     /protein_id="HYX52346.1"
                     /translation="MAAAEIVLRRREGKVLVVTINRPQARNAVDSATAAALGEVFQQF
                     ERDDNQHVAVLTGAEGTFCAGADLREIAEGRRPPVDPEGTGPMGPTWLQLSKPVIAAI
                     EGHAVAGGLELALWCDLRVAAKDAVMGVFNRRFGVPLIDLGTVRLPRIIGHGRAMDLI
                     LTGRPVSAEEALQIGLVNRVVEKGKALDAALEMARAIAEFPQQAMRNDRASAYEQWSL
                     SWEEARQNELRRGSGALQSGEAIKGAARFSSGTGRHGSFEKSK"
     gene            4720..5196
                     /locus_tag="VE783_02780"
     CDS             4720..5196
                     /locus_tag="VE783_02780"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52347.1"
                     /translation="MKTSILVFAFVLTGIMLAQPTPISAGFSRASVDALRSINAGGWK
                     FPASMQAHTAHQDEVKAKMARAHDAAESEDDADAFIFLQRYQFVHSQNFADYITAVTA
                     ASKKLQGKDAISRAEAQVVKDPRFATRKRKEDACGAALEKVLLSRMFAPPAQCDIY"
     gene            5453..5528
                     /locus_tag="VE783_02785"
     tRNA            5453..5528
                     /locus_tag="VE783_02785"
                     /product="tRNA-Lys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:5486..5488,aa:Lys,seq:ttt)
BASE COUNT         1137 a         1596 c         1809 g         1214 t
ORIGIN      
        1 cgcagcgtcc ttcatggttt ccgctacctg gaagttcaat ccggatttgt tcaggatctc
       61 gcggccctgc tccacgttgg tgccttccag ccgcaacacc agcggcagct tcaggttggt
      121 ggcccgtgcg gcttccacca cgccgttggc cagggtgtct acgcgcagga tgccgccaaa
      181 gatattgatc aggatcgctt ttacgtgctt gtcactcagc aggatttcaa aagcatgccg
      241 gatctgttcg gcattggcgc cgccgcccac atccaggaaa ttggcgggcg agccgccagc
      301 gtacttgatg atgtccatgg tcgccatggc caatccggcg ccgttcacca tgcaggcaat
      361 gtttccgtcc agcttgatgt agttcaggct gtactttgag gcttcaactt cgagcggatc
      421 ttcttcgttg atgtcgcgca gttctttcag atctttgtgg cggaagagcg cgttatcgtc
      481 gaagttcatc ttcgcgtcaa gggcgaagag ccttccgtca gtggtggtga tgaacgggtt
      541 gatctccatc aacgaagcgt cggtctcgac gaaggcccgg tagaggccgg tcatgaactt
      601 aacagcttca ttgatctgct cggctttcag gcccaggcca aaagccagct tgcgcgcgtg
      661 atatggctgg aagccggtga caggatcaat ggcttgtttc aggatggcat ttgggtcttt
      721 ggctgcgacc tcttcaatct ccataccgcc ggcggccgac gccatgaaca cgggcagcgc
      781 cgtggcgcga tcgaccacga tgccgagata aagctcgcgt tcgatgggca gcgtttcttc
      841 aatcagcagc cgctgcacga tcttgccttc cgggccggtc tggtgcgtga ccagcttcat
      901 gccgaggatt ttgtctgacc aattccgtgc ctcgtcaagc gacttggaga ccttcacgcc
      961 gccgcctttg ccgcgccctc cggcgtgtat ctgggccttt accaccacgc ctttggctcc
     1021 ggcatcgaac agccgcttgg ccgcggattc ggcttcttcg cgggtcaggg ccatctcgcc
     1081 gcgtggaatg gctaccccgt atttcgcaag gatcgtcttt gcctggtact cgtgaatttt
     1141 catgtctgat tgggtctgct tgtagcgaca ggacgcttga gggaacctca gattttataa
     1201 gagcagggag ggaatgggca aaccggagag gcgcacaaat ggtatcgtgc ttccgaagcg
     1261 agccaggagt tcctatcagc ttgagaatct cacgctatgc tggcagagtg atcaacgaag
     1321 cgggcaaaaa ctctcagccg ctccttcggc gcgatgttcc gctcgacgat agccgtcatt
     1381 tagcatagat gcgccatgaa tccagcagac aatacagttt tgatcaccgg aggcgcctcc
     1441 ggcattgggc tggcgcttgc acagagattt ttgaaagcgg gaagccgcgt gattatctgc
     1501 ggacgccggc aggagaagct gcgcgaagcc gcggccgtga gcccagggct gatcacacgc
     1561 gtgtgcgacg tgggcagcga agccgatcga gtggcgctgg cggaatgggt ggtgcgggaa
     1621 tatcccgcgc tgaacgtgtt ggtgaacaat gcaggaattc agcggcgcgg agttgatcta
     1681 agcaatgcag agcgttggcc ggacacgcac agcgagatcg cgatcaacct ggaagccccg
     1741 atccatctca caggcctgct gacaccccat ctgcggaggc aggcgaacgc ggcgatattg
     1801 aacgtgacct caggactttc ttttgtgccc attgcgtaca tgccggtcta ttgcgcgacc
     1861 aaggcagcgc tgcattccat cacgctttct ttgcggcgac agctgacgaa tactccggtg
     1921 aaggtgattg agatcattcc gccggcggta aatactgatc tgggaggacc cgggctgcat
     1981 actttcggcg tgccgctgga cgaatttgct gacgccgtta tgcaacgcgt ggccacggga
     2041 gaattggaga tcgcttacgg ctttgccgag caggcgagca aagcatcgcg cgcggaactg
     2101 gatgagcatt tcgaacggct gaaccagcct cgcggttaag cagattattt cggaacagcc
     2161 gcatcgggga tgcgtgacga gtggcctgca accagttgcc actgattgtc tcgccaaaca
     2221 aacacatccg taaagcgact ccgtctcacg atcgatgtgc cttctttctt ccgtgtaatc
     2281 gtcacgcgcc cggtgacgac cgcggcggcc gggtataatc ggacgtcagt gtcatcgaga
     2341 tcataggttg cgtcactcct atggcagtcc ttctccccag ccagatcttc cggcttgttg
     2401 ctggttctgc cctgggagtc agtgaatatg aattcttcag cttcaatccg ttcgaaataa
     2461 cggtaatcgc agttcaggtt ggcttgccca atctcctgtt caattcgcag taatgcattc
     2521 ttgatttcac ccggcgcccc cgatggggtt gcggtttttt gggcgaagaa gccggtggtt
     2581 gtcagcagca aaaccgctgc aacagagaag ttcatacgca gtctcccagc gcattagatg
     2641 aacagtgcga ggatcggtta gcatgtcttt tcgcaaaggc tgtcctgcga ttccgtgacg
     2701 gagggctctc atgaatttcc agaatttcga actcgaatac ttccagtcgc aatttgagcg
     2761 cacggtggag gacaacctgg cagacagctc ggtgaagtgc gccagcgtcc gcgagttgct
     2821 gggcgaggag agtcccgaag acctgatcaa cctgccgctt tattatccgg aggtgaatgg
     2881 gaccacgctg ctgagggaac gaattgccgc gctctatccg caggcgcagg cgaaaaatgt
     2941 gctggtgacg gtaggcgcgg cgcaggcgaa ctggatgatc tgccaatcgc tgctggagcc
     3001 aggcaatgag gtcattgtgg tttcgccggg ataccggcag gtctggggat tggccaagaa
     3061 cctgggctgc cgggtgaagg aagtctcttt acggccggag aacgattggc ggcttgacct
     3121 ggatgagttg gaggttgcgg cgactgcgga tacgaagctg atttcggtgg tgaatccgaa
     3181 caatcctacg ggaagcattc tgacgccgga ggagatgcgg cgcgtggttg cgatctgcgc
     3241 gcggcatggt tcctggctgc atgcggatga agtctattgc gggacggagc tggaaggtcc
     3301 ggagacgccg agcttctggg gaatgtatga ccgcatgatc tgcgtgaaca gcctttcgaa
     3361 agcgtatggt ttggccggac tgcgcatcgg gtgggcggtg gcgtcgccgg agatgattga
     3421 agagctgtgg cggagacacg agtatgcggt gatcgcagcg agcggaccga gcatgaagct
     3481 ggccgagatt gcggttgtgc cggagaagcg caggatgctg ttcgatcggc agaagaagct
     3541 ttcgcgcgaa ggtcacaaga tcctgcgcga ctgggtgagc acgcaagagg gacgcttctt
     3601 cgtgagcaaa gccacagcga catcgattgc gtttgtagga tacagcgcgg gcctgccatc
     3661 agaagagctg gccgactata tccgcaggca ggcctcagtg ctggttgcgc cgggaagtta
     3721 tctggggcgc gacggctact tgcgcattac cgtgggatac gagccggaaa aggtgagaac
     3781 agccttgtca cgcattggcg aggtggtggc gcaatttgca acggcgagtg cgatgggtta
     3841 tggccgccgc tgaaatagtc cttagacgcc gggaaggcaa ggtgctggtg gtgaccatca
     3901 accggccaca ggcccgcaat gcggtagatt ctgccaccgc cgcagcactc ggcgaagtct
     3961 tccagcagtt cgagcgtgac gacaaccagc acgtggctgt gctcacggga gcggagggga
     4021 cgttctgcgc cggggcggat ttacgtgaga tcgctgaagg ccggcgaccg ccggttgatc
     4081 ccgaaggcac aggaccgatg gggccgacgt ggttgcagct ttccaagccc gtaattgcgg
     4141 caatagaagg ccatgccgtg gctggcgggc tcgagctggc gctgtggtgt gatttgcgag
     4201 tcgcggcgaa ggatgcggtg atgggcgttt tcaaccggcg ctttggcgtc ccgctgatcg
     4261 atctggggac ggtgcggctg ccgcgcatta ttggccacgg acgagcaatg gacctgattt
     4321 tgacgggacg gccagtttca gccgaagaag ctttgcagat cgggctggtg aatcgtgtgg
     4381 tggagaaagg caaggctctg gacgcagcgc tggagatggc gcgcgcgatt gccgagttcc
     4441 cccagcaggc gatgcgcaat gaccgggcgt cagcgtatga gcagtggtcg ctctcgtggg
     4501 aagaggcccg acagaatgag ctgcgccgcg ggagtggcgc gttgcagtct ggtgaggcga
     4561 taaagggagc cgcacgtttc agctccggta cagggcggca cggcagcttt gagaaatcca
     4621 agtgacaggg atggaacgtt accatcagcc aatcgctaac ggtgctggcc tgccgctcgc
     4681 ccgatcatgg cgcctcttgt acactttgag cggcagaaaa tgaagacctc gatccttgta
     4741 tttgcgttcg ttcttaccgg cataatgctg gcccagccca caccgatctc ggccggcttc
     4801 tcgcgcgcgt cagtggatgc gctgcgctcc atcaatgccg ggggatggaa attcccggcg
     4861 tcaatgcagg cgcacaccgc gcaccaggac gaagtgaagg ccaagatggc acgcgcgcat
     4921 gatgccgcgg agtcagagga cgacgcggac gccttcatct tcctgcaacg ctaccagttc
     4981 gtgcacagcc agaactttgc cgactacatc acggccgtaa ccgcagcttc caagaagctg
     5041 cagggcaaag acgcgatctc gcgcgccgaa gctcaggtgg tgaaggaccc gcgctttgca
     5101 acccgtaagc gcaaggaaga tgcctgcgga gcggcgctgg agaaagtgct cctctcacgc
     5161 atgttcgcgc cgccggcgca gtgcgatatc tactgatttc ttctgtcgct tgcgctccaa
     5221 cccgccgacg agactttttc caaccatcgg tctttaggcc catccacact cggctcggcg
     5281 cgcaagtcgg cctcgccgag gttcacacgt ttttatcgtc gctgcgcgcc aacccgacgg
     5341 ggagcttcgc cgtatccagc cgtcctcagc tcctatgaca gccgcactca gcgcgtgggc
     5401 ggcttcgtgc ggctatcgcg ccaaaattgg gtatgttaaa gtgaaagagt gtgggcgcgt
     5461 agctcagttg gtagagcaac gcccttttaa ggcgtgggtc gctggttcga atccagccgc
     5521 gctcaccatc atttattgtc gcttcgcgac accccgccgg cgacactttt tccaatcatc
     5581 ggtctttagg cctatcgaca ctcggctcgg cgcgcaagcc ggcctcgccg aggtttacaa
     5641 gcttttatca ttgattcgcg acaccccgcc gacgtgactt tttccagcag ccttcccggg
     5701 gctcacgccc cgggcttgca ctatttcgcg cttcccaccc caagacgcga acaacg
//
LOCUS       DASQYP010000086         2811 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_257459, whole genome shotgun sequence.
ACCESSION   DASQYP010000086 DASQYP010000000
VERSION     DASQYP010000086.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 2811)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2811)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2811
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_257459"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..772)
                     /locus_tag="VE783_02790"
     CDS             complement(<1..772)
                     /locus_tag="VE783_02790"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52348.1"
                     /translation="MTMKFVRAAALGILVCLLVFGAAAQRSDRSIDDEARANTSAAES
                     NAHVSRLPVRSLLYPGATTKIYVRVMPWFGDSKHVQVGYHSDDPGQIASQVQDMMSRG
                     IDAAIVDWYGPDHGVSSQATDRLFKESEARGFGFGVSVDGGPIKECQKKGCDVTGFVL
                     SELKYAEKNYEDSNVYVRWNNRPLVFFFDGDKYPVDWNYVRSNLRLNPMFIFRNSGAF
                     DSRNDDGAFSWLAPETVNGSDPEGLQYLERFYSRAQRSP"
     gene            complement(1292..2185)
                     /locus_tag="VE783_02795"
     CDS             complement(1292..2185)
                     /locus_tag="VE783_02795"
                     /inference="COORDINATES: protein motif:HMM:NF015431.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HYX52349.1"
                     /translation="MEVHQLRYFCAVAETGSFTRAAEREQVAQPSLSQQIMKLEEELG
                     VRLFDRLGRSVRLTDPGQTFLPRARTILTEMKAAKDEVADRQATVSGPVSIGVIPTIA
                     PYFLPSRIASFSRKYPQASITVVEDVTARLLDRLRGGLIDMAIMAVPMRGHDLECASL
                     RTERLYAILPADHRLAKKRSLLIRELREDPFLLLRDDHCFRETAIEICKRARLSPQVI
                     FESGQFSSILGMVGAGLGISVIPEMALEKRSDCSFVLVADERASRTIGVATLRGHFLS
                     RVQRAFMDHLKATASARDHHA"
     gene            2320..2559
                     /locus_tag="VE783_02800"
     CDS             2320..2559
                     /locus_tag="VE783_02800"
                     /inference="COORDINATES: protein motif:HMM:NF028518.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA chaperone Hfq"
                     /protein_id="HYX52350.1"
                     /translation="MNVTSIQESFFSAALARHKHVIVYLLSGAMVTGKVRSYDKYSVV
                     LEEKDLEQLVFKHSISAAFLCRNKECKECEDGAPS"
BASE COUNT          647 a          839 c          743 g          582 t
ORIGIN      
        1 ccggactccg ctgggcgcga gagtagaagc gctcaaggta ctgcagaccc tccgggtcgg
       61 agccgttcac cgtctccggc gccagccagg aaaaagcgcc atcgtcgttt ctgctatcga
      121 aagcgcccga gttgcggaaa atgaacatcg gattcaggcg caggttggaa cgcacatagt
      181 tccagtccac cggatatttg tcgccgtcaa agaagaacac cagcggccgg ttgttccagc
      241 gcacgtaaac gttcgagtct tcatagttct tctccgcgta tttcagctcc gaaagaacaa
      301 aacccgttac atcgcaccct tttttctggc actccttgat cggtcctcca tccacggaga
      361 ctccaaaccc aaaaccacgc gcttcgctct ctttgaaaag ccggtcggtg gcctggctgc
      421 tcacgccatg atcggggcca taccagtcca cgatggccgc atcaatgccg cgcgacatca
      481 tgtcctgcac ctggctggcg atctgtcccg gatcatccga gtggtagccg acctgcacgt
      541 gctttgagtc cccgaaccac ggcatcaccc gaacgtagat ctttgtcgtc gcgccgggat
      601 agagcagtga ccgaaccggc aaccggctga cgtgagcatt gctctccgcc gctgacgtgt
      661 tcgccctcgc ctcatcatca atagagcgat ccgaccgctg tgcggctgcg ccgaacacca
      721 acaaacaaac caaaatgcca agagctgctg cccgaacaaa cttcatcgtc atgaaaagcc
      781 ttctgagatg attttgaaat ggtctggctt tattaagaat caacccgtgg cttgcgagtt
      841 tgttgttggt aagtagatca aacaatcagt gaggccgcgt aatacgcatt aagtgcctcg
      901 ctaatgagga gcgatgtttg gacttactca acgcttcatc ctgaacgtca tcccgacgtc
      961 cgttgagcga gcgagtgtat tcttcagctc gcgagcagga cggagggacc ttgcgttatc
     1021 cttttttgtg agggttgaga cgaagcttga acggccggag cgcagggccg ttggagaagg
     1081 cgcgctacct tcccaccccg ttctgcacca gcagcaccac aatcgcaagc aggaagatca
     1141 gggcgaatac aaacgcgttg tagcgctctt tttccataac cgtgtacccg cgcctaacta
     1201 gatgcaaact ctcgcgccgg ggttacagcc tcattttcgg ggccataaga agtgcggact
     1261 gaggatttat tagtgccgga ggttacttgc gttacgcgtg atgatcgcgg gctgaagctg
     1321 tggctttgag gtgatccata aaggctcttt gcacgcggct aagaaaatgt ccgcgcagcg
     1381 tggccacgcc gatggttcgt gaagcgcgct cgtccgccac cagaacaaag ctacagtcag
     1441 aacgcttctc cagcgccatc tccgggatca cggaaatccc aagccctgcg cccaccatgc
     1501 ccaaaatgct gctgaactgc ccgctttcga agatcacttg cggcgatagg cgggcgcgtt
     1561 tgcatatctc aatcgctgtt tcgcggaagc agtggtcgtc gcgtagcagc aggaaagggt
     1621 cttcccgcag ctcgcggatc agaagactgc gcttctttgc cagcctgtga tcggccggca
     1681 ggatcgcata aagacgctcg gtcctcagcg acgcgcattc cagatcatgc ccgcgcatcg
     1741 gcaccgccat gatcgccatg tcaatcagcc cgccacgcag ccggtccagc agccgcgccg
     1801 tgacgtcttc cactaccgtg atagaggcct gcggatattt acgtgaaaaa gaagcaatgc
     1861 gcgagggcag gaagtacggc gcaatcgtcg gaatcacccc aatgcttacc ggtcctgaga
     1921 cggtggcctg gcgatcggcg acttcatcct tcgccgcctt catctccgtc aggattgtcc
     1981 gggcgcgcgg caggaaagtc tgtcccggat cggtaaggcg caccgaacgg cccagccggt
     2041 caaagagccg cacacccagc tcttcttcca gcttcatgat ctgctgagaa agtgagggct
     2101 gcgccacctg ctcgcgctcc gccgcgcgcg tgaagctgcc tgtctccgcc accgcacaga
     2161 aataccgtag ttgatggact tccatagccg aaacctatta agaggatgct tattatatat
     2221 ttgacagata gattctccac aactattttg tgcagatcaa aacgcgccga ctccggcggg
     2281 ggcaaggagt taaggccggg acttcccggc tgtacggcta tgaatgtcac cagcatccag
     2341 gaatcctttt tcagtgccgc ccttgcgcgg cacaagcatg tcatcgttta ccttttgagc
     2401 ggggcaatgg tcacgggcaa ggtccgctcc tacgacaaat attccgttgt tctcgaagag
     2461 aaagacctgg agcaactggt cttcaaacac tccatctccg cggctttcct gtgccgcaac
     2521 aaagaatgca aagaatgtga agatggcgcc cccagctgac gctacacgca cactccgcat
     2581 gtgacagtcc ccatccagct ctgaccggct gtgttgtttc gttctcacgc gccccataga
     2641 atcgacttag aagagaaaaa atttgtgacc tgctcagctt cacccctgaa cttgagcggc
     2701 accttccgga ggtacccctg tggcaaaaca tgaggagaac ggctccaaga agcagacaaa
     2761 aggcaatcaa accagccaaa gtaataataa tgatgatcag cgcacactga c
//
LOCUS       DASQYP010000087        21899 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_277817, whole genome shotgun sequence.
ACCESSION   DASQYP010000087 DASQYP010000000
VERSION     DASQYP010000087.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 21899)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 21899)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..21899
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_277817"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2395)
                     /locus_tag="VE783_02805"
     CDS             complement(<1..2395)
                     /locus_tag="VE783_02805"
                     /inference="COORDINATES: protein motif:HMM:NF012670.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52351.1"
                     /translation="MTLCTPVMPFPTQQQPAYDPLLDDIGFMTCMTLVLLGNYAQTGH
                     LGGPLGYTPYNVAAHLVGPENGGLRYDYRRPKHPYSDKFMMAAGHSVPTCYALWMIMG
                     EALRRKYEETGDPRYYVDPHIAMLPIDALGFRRGAGALKTLLHETNLEDHPLFATAKG
                     RGIRALSGHAESIDCTNDVNGGPSGVGIATAAGKAMFWDVAGAPDSPKVIALEGEFAL
                     TEGHAQELKTQALALEVGKRLRVMVSNNNAGIDDTLIGGVVPKKYDGYDLVNQWTSYG
                     WNVFTLSNGNDYNHVTAALKAMDAVDPKDRRPIVAIGRTVKGYWPAAADGHLPGYGAQ
                     LVSYASHPYALKMNSEYFLALAQTFEKHYGVEFQGIRKGPVTDNRERLIQFKTNIDVV
                     MSLLDRNGLGDRLAERLVKIGDSVRDDVKLRFSATADPFLDDRLRVAALPEYPQKLSI
                     RNPVSGAEKQVSISLFKKPGEMAGTRRAISEIIKWMNYVTDGRFYTLAADLSESINVE
                     HGSLWGHYSPTDNPLGTRLKAPIQEAGNVSTAIGLVSQSASVDPEKFAGVWALSGTYG
                     AFTPLMYTPARVWSQQNQDSKFRVGVLHILTAHSGPETAADARTHFGIFAPQVWKLFP
                     RDQVINLSFWDYNDVAPGYFAAAEIAARDPRVGIITLEVARPDFAVADRSRFADSDLR
                     AAAKGLYVIRDFVPNQPRHGYVIAQGSSSTVNLVKVLPRLEAAGVNVKVVAAISEELF
                     DRQPQAYRDSVLPPEARYDLMVVSTGTRRMWPLRNLGPLTDEYSLTPDFDNCWRTGGL
                     "
     gene            complement(2741..5278)
                     /locus_tag="VE783_02810"
     CDS             complement(2741..5278)
                     /locus_tag="VE783_02810"
                     /inference="COORDINATES: protein motif:HMM:TIGR03434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HYX52352.1"
                     /translation="MQTFEQVRYALRQFRKAPGFTITAVLTLALGIGATTAIFTLVHA
                     VLLKSLPVTRPEQLVRVGNEENCCVNGGMQDNWSLFSWEQYRQFKEQTSGFEELAAFQ
                     AGSSLLGVRRSDSPKLSESFRGEFVSGNYFSTFGIPAYAGRMISPQDDIKGAPPVAIM
                     SFRAWQQKFAGDRSVVGAAFVINSQPVTVVGIAPPGFFGDRIQSNPTEFWLPLTSEPV
                     IEPANAILDEAELDWLDLIGRVKPGADQKAMEAQMQVLLRQFLLSPISKVEERSKSLV
                     PKQTLHFSPGGNGLQRMRDEYQDGLHLLMWVSGFVLLIGCGNLANLMLVRATARKQQI
                     ALRSALGAQRRTLILQALTESVVLALMGGIAGIGVAFAGTRMILRLTFGHDYVPITAS
                     PSLTVLFFAFAVSVLTGILFGMAPAWLTARTQPADALRGAGRSIGGRAGWGQKALVIT
                     QAALSLVLLCAAGLLTRSLTNMQHRHFGFETAHRYILHIDPQMAGYSADKLEPLYRQV
                     KENLSALPGVQQVAFSIYSPMEGDNWGEGVYIDGDPPPAPGDTEHGASWLRASPNYFE
                     AIGTKILEGRGFTEQDSPSTRAVALVNRFFEQKYFKDGHAVGKYFSDDLKHPGAFEIV
                     GVTEDTNYWGASSKMRPMYFLAQGQSARNPDPQYQRFEDRSRYLNAIVIETRGEISGL
                     ETQVRRVLSQINPDLAVIDFQSFAVQVAMNFLQQEMITKLTSLFGLLALVLASIGLYG
                     VTAYSVEQRTSEIGIRMALGADRLNMLAMILRGAFLQVGIGLAIGLPAIILGGRLMAS
                     KLYGVKHYDPFVLVLTTVVLSLAAFAAALIPARRAANTEPMLALRTE"
     gene            complement(5787..7031)
                     /locus_tag="VE783_02815"
     CDS             complement(5787..7031)
                     /locus_tag="VE783_02815"
                     /inference="COORDINATES: protein motif:HMM:NF014805.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52353.1"
                     /translation="MASLPDLPPVFVEGLDVSAYGIARSVGRNGVPVYALNDRLRDPL
                     RYSRYIRNCFIYPDDPTQPRAYAGDSVGNEEVVSRLLLEWGSQFTQKPVLFATSDWFA
                     RFLSVKQTELSQKFLFHWVSPDLFNTIVDKGKMVAFCQKHGVQVPRTHITRAEDDMPR
                     VTRDFVYPCIIKPVHRYTAGFPVESAKVLIASDAGQALDFFTEYPRLKGATLMQELIE
                     GEDDQVFQCTALINNAGQVATYSTVRKLRQYPPGFGSMCYGQTEPNESMAAEALKLLR
                     ALGYRGLGSLEFKYRQKDGGYYFIEMNTRLPWYNGIFADADINLPWLAYLDLIGEAKQ
                     PSARPVQREHTRWVSFHNYSGCYRETRPTQSIGGVRFASHIAGANSYAWWNWSDPRPF
                     LASVAFAARRGGGNLLRRLGLR"
     gene            complement(7041..8261)
                     /locus_tag="VE783_02820"
     CDS             complement(7041..8261)
                     /locus_tag="VE783_02820"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF024871.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HYX52354.1"
                     /translation="MSDRPSNITAAETRPGERFFVRVDEGGIEVIEQLGADWRGLCDE
                     TGDDIFYRPEWPLAYLTAFAPETKINVISVWESGRLRGVMPLVRERIWASGLPAIRLT
                     LPGNVHSFRIGPAICGGEDREAVVCALWKGVNALPDWGMLDVSQVLGGSGMDCISAVA
                     RREGFQVARKRTSQTLFLPVGAPVDGQPWAPDIRSKFRSHLRRARRQLEEHGKLELKH
                     FNRTDASALRRFYDLEASGWKGAEGTAIKCHPSTRIFYDSVAQAAAQQGYLSLDFLEL
                     SGKPIAAHLGFNFRGHYYLAKAGYDESYRRQGPGQLLVNEILSQSVERGLHTFDFVGP
                     ATWDESRWASDRRTNYRIFIFRRNFYGGLLHVVRIAGRDTLLRLVGRDDDESKPLELK
                     SKPQGSDKESGAET"
     gene            complement(8422..9399)
                     /locus_tag="VE783_02825"
     CDS             complement(8422..9399)
                     /locus_tag="VE783_02825"
                     /inference="COORDINATES: protein motif:HMM:NF013961.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglutaminase-like domain-containing protein"
                     /protein_id="HYX52355.1"
                     /translation="MRKLLLLPLLLSASLVIAQAPKSRHFVFDYSFTVKVSDPGKPLD
                     VWFPMAHTDQFQQVNVIEKKGDLPLKETSESEYGNRFFYAHADKAEKPEYHFTVRYDV
                     VRTEHLAAVAQKETAQSRELNRFLQPDNLVPITGKPAELAKEQVRPGMSEMEKAHAIY
                     NYVFNTMKYDKTGSGWGHGDTLWACDSKRGNCTDFHSVFISMARSQYIPARFEIGFSI
                     PEDKATSDIAGYHCWAEFYTKDAGWYPVDISEAWKHQEKKDYFFGAHDSNRIQFTVGR
                     DLELSPKQNGERLNYMVYPYAELGGQNWPNIAIAFSFSDVTAQPRAASK"
     gene            complement(9554..10072)
                     /locus_tag="VE783_02830"
     CDS             complement(9554..10072)
                     /locus_tag="VE783_02830"
                     /inference="COORDINATES: protein motif:HMM:NF020123.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TlpA disulfide reductase family protein"
                     /protein_id="HYX52356.1"
                     /translation="MRRLVIICAVLLALGVFYWGLRPRKQAGAASLPARVGAVTLTDL
                     SGRQFTISDYKGKVLLVNFWAAWCAPCQEEIPQFAALQTKYGSQGLQVIGISVEDIES
                     ELRDFCRKKNVNYPVVPGDAKIADAFGGILGLPTTLLIGRDGRIYKKYAGATDFATLE
                     NDFLPFFKAPPQ"
     gene            complement(10087..10617)
                     /locus_tag="VE783_02835"
     CDS             complement(10087..10617)
                     /locus_tag="VE783_02835"
                     /inference="COORDINATES: protein motif:HMM:NF012790.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhodanese-like domain-containing protein"
                     /protein_id="HYX52357.1"
                     /translation="MLKTPNSLHNLAMASALIVVAATALGATAQKRDTNQTGPAAQKQ
                     EEGPVRNWLPGSPELIQPEDLAKALKGGQKPVVLYVGPKAFYQQSHVPGAEYIGATAR
                     PDGIEQLRKRAASIKHDAPVVVYCGCCPWEHCPNIRPAYDELHKEGFTNVKVLYLAGT
                     FGTSWADKGLPVEKGQ"
     gene            10824..11432
                     /locus_tag="VE783_02840"
     CDS             10824..11432
                     /locus_tag="VE783_02840"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52358.1"
                     /translation="MMNLKKLAFLALVAAAVALAGCDSEPQKSTPAQKKTNEYETGRF
                     ALQKLIPSARLWSPDAQPVTLESSASSEALGHDGKAGNWRAVFGSASRRKAEPFLWSG
                     MADAPQKVDHGVEDSFNPSNRSTQPWDLAFLKIDTDKAFEVAQQHGGKQIVEKDPKTP
                     VSYRLGWNAQANQLLWSVVYGDSGARPTFLVDASSGAFVRKE"
     gene            complement(11433..12362)
                     /locus_tag="VE783_02845"
     CDS             complement(11433..12362)
                     /locus_tag="VE783_02845"
                     /inference="COORDINATES: protein motif:HMM:NF025910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HYX52359.1"
                     /translation="MFSQPLRILALFALVCLGLFGIRASAQDSMDNQPHIQPRKDEKE
                     KRPAKPAPQPSDEQSGTGAQPPDQKSVQTPSASPVAPSLDDEPQGESSSRDSLIDLNA
                     APATRKVTIAPENYPYDPHRAVKDIEVGNFYLKQKNYRAALDRFHDALLYKPNDAEAT
                     YGLAVTQEKLELWDEAYKTYSKYLEILPRGPMAPDSKQALARIDSKTGAHFDTPVVAG
                     QEKQASEYMRDGEKFLANNQYDQARDQFEHAMRLDTQDPVIYFRLAQSLQGMQRLDPA
                     RQYYKKYLEMQPSGPMAADAKRNIAEIKAMLGQ"
     gene            complement(12449..13186)
                     /locus_tag="VE783_02850"
     CDS             complement(12449..13186)
                     /locus_tag="VE783_02850"
                     /inference="COORDINATES: protein motif:HMM:NF012894.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OmpA family protein"
                     /protein_id="HYX52360.1"
                     /translation="MNFRSSSLVLLAGAAMLFSAGCSSKNYVRQQTQPIIDKTNTLDD
                     LTAKNNRDIRDVDSRAQQGIQGVNSKASEADQKAAAARGRADQAQQLAAQANTRVDTL
                     SNQVANLDNYRPVLETSVHFAFNKAILTDKAKSALDQLVAEIPNTKGYLVVVEGDTDS
                     VGSAMYNYKLSERRADSVVQYLSSKSVPAHKIYIVGLGKDHYTAENNTADGRAKNRRV
                     DVRLMTNSTSQETPASAQSTTAPNPSR"
     gene            13607..15556
                     /gene="uvrC"
                     /locus_tag="VE783_02855"
     CDS             13607..15556
                     /gene="uvrC"
                     /locus_tag="VE783_02855"
                     /inference="COORDINATES: protein motif:HMM:NF011263.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009380 - excinuclease repair complex
                     [Evidence IEA];
                     GO_function: GO:0009381 - excinuclease ABC activity
                     [Evidence IEA];
                     GO_process: GO:0006289 - nucleotide-excision repair
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrC"
                     /protein_id="HYX52361.1"
                     /translation="MDLLQKIRTIPTQPGVYLYKDAEGEVIYVGKAKSLRARVRSYFQ
                     EGVAEANAKTGSLLREAVDVEYIVVANNKEALALENNLIKQKKPRFNILLRDDKTYPY
                     IKLTLAERFPRVYVTRRLKKDGSEYYGPYFPGNLAYRIVDLIHRHFLVPSCKVDLSRF
                     HPRPCLQYYIKRCLGPCVQNLTTPEFYAEAVRDVKLLLEGRQTDLARGLRARMEQAAE
                     SEEYERAARYRDLISTVDQLQEKQRMAAAEGDDMDVFGYHFESQMLAVNVFHMRGGKV
                     LDRREFFWEDLPEFALPEPETPTLGDGVPIGESAAEGGHPPHQAKTGLAGGPGRTPQH
                     PAFHPGQFFSALLKQVYIDQQYVPRDIVVPVDFEDRAELAELLEEKRGSKVEILIPQR
                     GEKRSLIDLAAQNAKQSFDQRFRIMKPQAKAVQEALQDALSLPELPRRIECFDISHIQ
                     GAETVASMVVWEDGKMNKSEYRKFIVRTVEGVDDFASMREVVARRYKRLRDESRTLPS
                     LVLIDGGLGQLHAAAQALESLEITNQPLASIAKKEEIIYVYGQEDEPVVLERHSPVLH
                     LVQMVRDESHRFAVTFHRKRRQMRDRASELLEIPGIGEITRQRLLQHFGSVRAVQQAD
                     AAALGAILNKTQTEAVLKHFGKAIS"
     gene            15828..16523
                     /locus_tag="VE783_02860"
     CDS             15828..16523
                     /locus_tag="VE783_02860"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52362.1"
                     /translation="MILLSLPPQGPVLDLHGGGNLVQNGTTISGIIHLDGSPCFDPAA
                     DDIIVTGSAVGSEKAFDGVITLKTAPVRGQTITITSGALPPPAPGVNSSFTGTFTLAG
                     GTCAPQTSGTMTGSMVPSVSGPWKGNFSPALVGSAPIGVTANLSQTGPDAHGFFQITG
                     NFSFSGSTCFSSGTVTSSSVLGATTSLTLTANDGSQLTFSPQLTSAATGPSLKVCMRS
                     RLEHAASTAAKVC"
     gene            complement(16698..17333)
                     /locus_tag="VE783_02865"
     CDS             complement(16698..17333)
                     /locus_tag="VE783_02865"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52363.1"
                     /translation="MGPNRLHVLVACAAMFLLISCGQSPQPPTVVSANTSTDNAPSQA
                     AQSVTGKTAFFEMYKTARTWSRDLLPLTLQSKPMPGTTIDSGNAVLWSATFASPSQHQ
                     SRTFTYCAIAKPPEHYKGVSVGNSVPWGGPTSDALPFDTYEVSVDSDAAFKTASADAA
                     AWLKKNPGKEVSVALGNAAQFRQPVWLFLWGDRKSGYAVYVSAKTGAVVKK"
     gene            17457..18263
                     /locus_tag="VE783_02870"
     CDS             17457..18263
                     /locus_tag="VE783_02870"
                     /inference="COORDINATES: protein motif:HMM:NF013586.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M15 family metallopeptidase"
                     /protein_id="HYX52364.1"
                     /translation="MIHLNRSKISFSSALLLLCLSFITLAAQTPAPATTFRITPLRPV
                     AELEKEALAAHPPEEKGEFRKSELVELVKLDPTIKLDIRYAGSNNFLSTPIYSQARAF
                     MQRPAAEALVRALHALKEEGYGLLIHDAYRPWYVTKIFWDATPDDKKIFVAAPKEGSK
                     HNRGCAVDLTLYDLKTGQPVQMPSGYDEMSTRAYADYAGGTKEETARRDLLRRAMEHE
                     GFTVYPQEWWHFDYKDWKLYRIQNVRFEEIGRSNGRSNRRAALTLATFSN"
     gene            18281..19789
                     /gene="glpK"
                     /locus_tag="VE783_02875"
     CDS             18281..19789
                     /gene="glpK"
                     /locus_tag="VE783_02875"
                     /EC_number="2.7.1.30"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016292161.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004370 - glycerol kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006071 - glycerol metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol kinase GlpK"
                     /protein_id="HYX52365.1"
                     /translation="MSSSSAKYMAALDQGTTSTRFILFDRQGRMHACAQREHAQVYPQ
                     PGWVEHNPDEIWERTQQVMADAMQQAGASSNDIAAVGITNQRETTVVWERQTGKPIAN
                     AIVWQDTRVADDVARLTLEKGEHFFRSRTGLPVSTYFSALKLRWLLENVPDARTRAEQ
                     GELLFGNIDSFLVWRLTGGPEKGLHLTDVTNASRTQLMNLRTLAWETELLEAFSVPPQ
                     MLPRIAASSELYGEIADGPLAGVPIAGILGDQQAALVGQTCFQRGEAKNTYGTGCFLL
                     MNTGEKMVPSKHGLLTTVAYKFGKNPPCYALEGSVAIAGALVQWLRDNLGMIRTSGEV
                     EELARSVDDNGGVYFVPAFSGLYAPYWNEAARGTISGLTRYANRAHIARAVLEATAFQ
                     TRDVVEAMEKDSGIKLEVLRVDGGMIANKLLMQFQADMLDRPVVRPAISETTALGAAY
                     AAGLAVGAINGISELRALWSAAETWRPQLDPEKREQVYARWEKAVSRSVDWI"
     gene            complement(19793..20455)
                     /locus_tag="VE783_02880"
     CDS             complement(19793..20455)
                     /locus_tag="VE783_02880"
                     /inference="COORDINATES: protein motif:HMM:NF012659.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52366.1"
                     /translation="MRDYRIYRVYLFAIVVFALAATLVARRHKPKQQQDSNFDYYLLS
                     LSWAPNYCAEHPTDHSGECRTGNHTAIVLHGLWPQSNSGQPPLSCAPASPVASDVVRR
                     MQDYYPRAALIQHEWEKHGTCSGLSAQDYFANAERAFKKLEVPPKYRNLTAQKQVPRE
                     QLEADFASANRASAAAFRLSCHTGELVAVEVCLNKQLDFQACTQSVRECPSPQVTMQP
                     VR"
     gene            20615..21049
                     /locus_tag="VE783_02885"
     CDS             20615..21049
                     /locus_tag="VE783_02885"
                     /inference="COORDINATES: protein motif:HMM:NF019301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DoxX family protein"
                     /protein_id="HYX52367.1"
                     /translation="MKIPFLLGRLIFGGFFLYNGINHLKERRQLSQYAQSKNVPKPDL
                     AVSGSGIALIAGGASVLLGIKPKLGTLAIIGFLAGVSPTMHNFWKVEDPAQRMNDMIN
                     FSKNMALLGAALALLAVEEPWPASVPVAQPEDRYRMEDIVAA"
     gene            21071..>21899
                     /locus_tag="VE783_02890"
     CDS             21071..>21899
                     /locus_tag="VE783_02890"
                     /EC_number="1.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012472.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HYX52368.1"
                     /translation="MDRRNFLKGVAGSALTVKMSGAGMQHSNSAQSNSGGMIYRTLGK
                     TGEKVSAIGLGGFHIGQPKLSEQDSLKLIRSAIDGGITFMDNSWDYNQGESEVRMGKA
                     LKDGYRQKVFLMTKLDGRTKQEAAKQINESLQRLQTDHLDLLQHHEVIRFEDPDRIFA
                     EDGAMEAVLEAKKAGKVRYIGFTGHKDPHIHLYMLELARKNNFQFDTVQMPLNVMDAH
                     FRSFAQLVIPEAQKMGLGILGMKSMGSGVILKSNTVTPVECLQYALNLPTSVVITGID
                     "
BASE COUNT         4773 a         6172 c         6358 g         4596 t
ORIGIN      
        1 cgagtccgcc ggttctccag caattgtcaa agtcaggcgt gagtgaatac tcatcggtca
       61 aaggaccgag gttgcggagc ggccacatgc gtcgtgtgcc tgtcgatacg accatcagat
      121 cgtagcgagc ctcgggcggc agcacggaat cgcgatatgc ctgcggctgg cgatcgaaca
      181 gctcctcgct gatcgcggcg accactttca cgtttacacc ggctgcttcg agtctgggca
      241 gcactttcac cagattcaca gtcgaactgg atccctgcgc gatcacgtaa ccgtggcgcg
      301 gctggttggg cacgaaatcg cggatcacgt aaaggccctt ggcggcggcg cgaagatcgg
      361 agtcggcaaa acggcttcgg tccgccaccg cgaaatcggg tcgcgcaact tccagcgtga
      421 tgatgcccac gcgcggatcg cgggccgcga tttccgccgc cgcgaaatag cctggcgcca
      481 cgtcgttata atcccagaag ctcagattga tcacctgatc tcgagggaac agcttccaca
      541 cttgcggcgc aaagatgccg aagtgggtgc gcgcgtcggc cgcggtttca ggtccggagt
      601 gcgcggtgag aatatgcagc acgcccaccc ggaatttgct gtcttgattt tgttgactcc
      661 agacacgcgc tggcgtgtac atgagcggcg taaacgctcc gtaggtgccg ctcaaggccc
      721 aaacgccggc gaatttttcc gggtccacgg aggcgctttg gcttaccagc ccgatggcgg
      781 tggaaacatt gcccgcttcc tgaatgggcg ctttcaaccg cgtgcccagc ggattgtccg
      841 ttggactgta gtggccccac aaactgccgt gctcaacgtt gattgattcc gaaaggtcgg
      901 cggccagggt gtagaaccgc ccgtccgtga cgtaattcat ccacttgata atttctgaaa
      961 tcgcccgcct tgttcctgcc atctcgcccg gtttcttgaa gagcgaaatg ctgacttgct
     1021 tctccgcgcc agaaaccgga ttacgaatcg aaagcttctg cgggtattcc ggcagcgccg
     1081 cgacccgcag gcgatcgtca aggaatggat cggccgtggc tgagaaacgc aacttcacgt
     1141 cgtcgcgcac gctgtcgccg attttcacca gacgctctgc caggcgatca cccaatccgt
     1201 tgcggtcgag cagcgacatc acgacgtcaa tgttcgtctt gaactgaatc aatcgttcgc
     1261 gattgtcggt gaccgggcct ttgcgaatgc cctggaactc cacgccgtaa tgcttctcga
     1321 acgtctgcgc caacgccaga aagtactccg agttcatctt cagtgcgtag ggatggcttg
     1381 cataactcac caattgcgcg ccgtagccgg ggaggtgccc gtcggcggct gcgggccagt
     1441 agcccttgac ggttctgccg atcgcgacga tgggacggcg gtctttcgga tccactgcgt
     1501 ccatggcctt cagggcagcg gttacgtggt tatagtcgtt accgttcgaa agggtgaaaa
     1561 cgttccatcc atacgacgtc cattggttta cgagatcgta gccgtcgtac ttcttgggga
     1621 caacgccgcc aatcagggta tcgtcaatgc ccgcgttgtt gttggaaacc ataacccgca
     1681 aacgctttcc cacttccagg gcgagcgcct gcgtcttcaa ttcctgggcg tgaccttccg
     1741 tgagcgcgaa ttcgccttcc agcgcgatca ctttcggcga gtccggtgcg cccgccacat
     1801 cccagaacat tgcctttccc gcggccgtgg cgatgccgac gcccgagggg ccgccgttta
     1861 cgtcgttagt gcagtcaatg ctttctgcat gccccgagag cgcacgaatg ccgcggccct
     1921 tggctgtggc gaatagggga tggtcttcca aattcgtttc gtgcagcagc gtcttcaacg
     1981 cgcccgcgcc gcgccggaat cccagggcgt cgatcggcag catggcaatg tgcgggtcga
     2041 cgtaatagcg cggatcgccg gtctcctcat atttacggcg cagggcttca cccatgatca
     2101 tccacagcgc gtagcacgtg ggaacagagt gacccgccgc catcatgaat ttgtcggaat
     2161 aagggtgctt gggccgacgg taatcgtagc ggagtccgcc gttttccgga cctaccaggt
     2221 gcgccgcaac gttgtacggc gtgtatccca gcggtcctcc caggtgcccg gtttgcgcat
     2281 aatttccgag cagcaccagg gtcatgcagg tcatgaatcc aatgtcgtcg agcagcggat
     2341 cgtacgcagg ttgttgctgc gtgggaaacg gcattaccgg ggtgcacaat gtcattaacg
     2401 gtctccgtag tgatgggggt tgtaactgca ggaccgcagt ccggtcgaac gaagcgaatt
     2461 aaagttgacg ccgctttaca tagctgcaat ttttagcgga cttttggtca ctaacccttt
     2521 tatccaccat acagcgacat ctgcgtagct ggcaacgccc tctaacgcag agcacctctt
     2581 caggttttca cacacaggat atttgtcagg ttttgctttc aatgaatcta tctcgttaat
     2641 tgtgccaggc ttttttacat aaaagccagt tgcacccggg tggtcatgct gcattcgtct
     2701 tagcggaccc tgcaagtcgc caagagcctc aacttggcgg ttactcggtc ctgagtgcca
     2761 gcatgggctc ggtgtttgcg gctcgtcgcg ccgggatcaa agccgcagca aatgccgcca
     2821 gcgaaagcac aaccgtggta agcaccagca caaaggggtc gtaatgtttt accccataaa
     2881 gcttgctggc catcaatcgg ccgcccagaa tgatcgctgg cagcccgata gccagcccga
     2941 ttccgacctg aaggaaagcg ccacgcaaga tcatggccag catgttcagg cgatccgcgc
     3001 ccagagccat gcgaatgccg atttcgctgg ttcgctgctc caccgaatat gcggtcacac
     3061 cgtaaagacc gatcgatgca agaaccagcg ccagcagtcc aaagagtgac gtaagctttg
     3121 tgatcatctc ctgctgcagg aagttcattg ccacctgaac agcgaagctc tgaaaatcga
     3181 tcacggcaag atcaggattg atctgcgaga gaacacgacg gacctgcgtt tccagcccgg
     3241 aaatttcacc cctggtctca atcacgatcg cgttcagata tcgggaacga tcttcaaatc
     3301 tctggtactg cgggtcagga tttcgcgcgc tctggccctg ggccaggaaa tacataggcc
     3361 gcatcttgct ggacgcaccc caatagtttg tgtcttcggt tacgccaaca atttcgaaag
     3421 cgccaggatg cttcaggtcg tcgctgaagt acttgcctac ggcgtgacca tccttgaaat
     3481 atttctgttc aaagaagcgg ttcaccagag cgacagcgcg tgtgctcggg gagtcctgct
     3541 cagtgaagcc acggccttcg aggattttgg tgccgatggc ctcaaagtaa tttggactgg
     3601 cgcgcagcca ggaggcgcca tgttcggtat cgccgggcgc gggtggcgga tcgccatcaa
     3661 tgtaaacgcc ctcgccccaa ttgtcgcctt ccatggggct gtagattgag aaagcgacct
     3721 gctgcacccc tggaagggcg ctcaggtttt ctttcacctg gcgatacagg ggttcgagtt
     3781 tgtccgccga atatccggcc atctgcggat caatgtgcag aatgtagcgg tgcgctgtct
     3841 caaagccaaa gtggcggtgc tgcatgttgg tcaggctgcg agtgagcagg ccggcagcgc
     3901 acaagagcac cagggacaga gctgcctggg tgatgacaag ggctttctgt ccccatccgg
     3961 ccctgccgcc aatggagcga cctgccccgc gcagagcgtc ggccggctgg gttctcgcgg
     4021 tcaaccatgc gggcgccatg ccaaacaaaa ttccggtgag cactgaaacc gcgaaggcaa
     4081 agaaaagcac cgtgagcgag ggtgacgcag tgatcggcac ataatcgtgg ccgaaggtga
     4141 gccgcaggat cattcgcgtt ccggcaaagg cgacgccaat tccggcaatt ccccccatca
     4201 gcgccagcac cacgctttcc gtgagcgcct gcaggatcaa ggtgcggcgt tgcgcgccaa
     4261 gtgcggagcg cagggcaatc tgctgcttgc gcgcggtcgc ccgaaccagc atcaagttgg
     4321 caagattgcc gcaaccgatc aaaagcacga aaccagacac ccacatgagc agatgtaggc
     4381 cgtcctgata ttcatcgcgc atgcgctgca ggccattccc gcccggtgag aagtggagtg
     4441 tctgcttggg taccagagac ttggatcgct cttccacctt gctaatgggg ctaaggagga
     4501 attggcggag caggacctgc atctgggctt ccatggcttt ctggtcggct ccgggcttca
     4561 cccttccgat aagatcaagc caatccagtt cagcctcgtc gagaatcgca ttagccggct
     4621 cgatcaccgg ctcgctggtc aggggcagcc agaattcggt cgggttgctc tggatgcgat
     4681 ctccgaaaaa gccgggagga gcaatcccaa ccactgtgac cggttgggaa ttgatcacga
     4741 atgccgcgcc caccacagac cggtccccgg cgaatttctg ctgccacgcg cggaagctca
     4801 taatggcgac cggtggcgct ccctttatgt catcctgagg cgagatcatg cgccccgcat
     4861 aagcggggat accgaacgtg gaaaaataat ttccggaaac aaactccccg cgaaacgatt
     4921 ctgaaagctt ggggctgtcg cttcggcgca cgccaagcag gctgctcccc gcctgaaatg
     4981 cagccagttc ctcaaacccg gaagtttgtt ctttaaattg ccggtactgc tcccaggaaa
     5041 aaagcgacca attgtcttgc atgccgccgt tgacgcagca gttttcttcg ttgccaactc
     5101 gcaccagttg ctcgggcctg gtcacgggca gagacttgag aagcacagca tggacgagcg
     5161 taaaaatggc tgtggtggct ccgatgccga gtgcgagcgt aagaacggcg gtgatggtaa
     5221 aacctggggc tttcctgaac tggcgaagcg cgtagcgaac ctgttcgaaa gtctgcatct
     5281 tgagtccttg ccctgcttga gggtatatac ggattgcatg aaaaaaggtt tctagaatct
     5341 gctccagata tgcaaccggc cttaacgtct tatgcatttg aggcattgac ctaattctta
     5401 ctaggtgagc tgcctgatag ctgttagaat tctgggaaaa atataaggag agtccacccc
     5461 tttggatact caatcaataa tcgcagagtt ggaagccgaa agagaccgat taagtcaggc
     5521 aatttctgcc ttgcagggcg ggaagcgagg tccgggaaga cccagggcca cagcttctgc
     5581 cgccaccggg aatggcagga gaggtccacg cagactttcc gcagcagctc gacggaaaat
     5641 agccgaggcc gcgcgcagga gatgggcaaa ggccaaagca gcaggccgga acagtcttta
     5701 acccaggtac cccagagaac atgcagccct ttgataactg gggctgcatt tttttgcgcc
     5761 tatagagcgt cagcagaaca acctgatcat cgcagtccca aacgtcgcaa caaattgccg
     5821 ccgccgcggc gcgccgcaaa cgcaacagag gccagaaatg gtcggggatc cgaccagttc
     5881 caccaggcgt aggagtttgc tccggcaata tgcgaagcaa agcgcacgcc accaatactc
     5941 tgtgtagggc gggtttcacg gtagcagccc gaataattgt gaaagctgac ccagcgggtg
     6001 tgctcgcgtt gtacggggcg cgctgaaggc tgtttagctt cgccgataag atccaggtaa
     6061 gccagccagg gcaaattgat atctgcatcg gcaaaaatcc cgttgtacca cggcaggcgg
     6121 gtgttcattt caatgaagta gtaccccccg tctttttgac ggtacttgaa ttcgagcgat
     6181 cccagcccac gatagccgag ggcgcgcagc agcttcaatg cctctgcagc catagattcg
     6241 ttgggttccg tttggccgta gcacatgctt ccgaatccgg gagggtactg ccgcagcttg
     6301 cgcaccgtag aatacgtggc cacttgaccg gcattgttga tcagcgccgt gcactggaac
     6361 acctggtcgt cttctccctc gatgagttcc tgcatgagtg tcgcgccttt gagccgagga
     6421 tattccgtga agaaatccag cgcctggccc gcgtcactgg cgatcaatac tttggcactt
     6481 tccacaggaa agccggcggt gtaacggtgc accggcttaa tgatgcaggg gtagacaaag
     6541 tcgcgcgtca cccttggcat atcatcttca gcccttgtga tatgggtgcg cggaacctgc
     6601 acaccgtgct tctggcagaa cgccaccatt ttccccttat cgacaatggt gttgaagaga
     6661 tcaggagaaa cccaatgaaa gaggaatttt tgcgacagct ctgtttgttt tacggagaga
     6721 aagcgggcaa accagtcaga tgttgcaaat agaacaggct tttgcgtgaa ttggctgccc
     6781 cattccagca gtaaacggct tacgacttct tcattgccta cgctgtctcc agcgtaggcc
     6841 cgaggctgag tcggatcgtc aggatagatg aagcagttgc gaatataacg ggagtagcgc
     6901 agtggatcgc gaagacgatc attcaaggca tacaccggaa ctccattccg gccaacgctg
     6961 cgggctattc cgtaggcgga aacgtccagc ccttcaacga agaccggcgg aagatcaggt
     7021 aaggaagcca tgccttgagg ttaggtttct gcgccggatt ctttgtcgct gccctgtggt
     7081 ttagatttca gttccagcgg tttgctttca tcatcatcgc gcccgaccag ccgcaaaagg
     7141 gtatctcggc ctgctatacg aaccacgtgc aacagccctc catagaagtt cctgcggaaa
     7201 ataaatatcc gatagttcgt gcgacgatct gatgcccagc ggctttcatc ccatgtggct
     7261 gggcctacga aatcaaaggt atgcaagccg cgctcgacgc tttgtgaaag aatctcattg
     7321 accaacagct ggccaggccc ctggcggcga tagctctcgt catatcccgc tttggcgaga
     7381 taataatggc cgcggaaatt gaacccaaga tgggcagcaa tgggtttacc gctcaactcc
     7441 aaaaaatcga gcgagaggta gccctgctgc gctgcggcct gcgccactga atcgtaaaaa
     7501 atccgggtac tcggatggca cttgatggcg gtgccttctg cgcctttcca accggaagct
     7561 tccaaatcgt aaaaacgccg aagcgctgaa gcatcggtgc ggttgaagtg cttcagttcc
     7621 aattttccgt gttcctcaag ctggcgacgg gcgcgacgaa ggtgcgagcg aaacttggat
     7681 cgaatgtcag gcgcccatgg ctggccgtcg accggggcgc cgaccggaag aaaaagagtt
     7741 tgagaagtcc gcttacgcgc gacctgaaat ccttccctgc gcgctacggc ggaaatacag
     7801 tccatcccgc ttccacccag gacttgcgaa acatccagca tcccccagtc gggcagggca
     7861 ttcacgcctt tccaaagagc gcacaccact gcctcgcgat cttcaccgcc gcagattgcg
     7921 ggcccgatcc ggaaagagtg cacgttgccg ggtagggtaa gtcggattgc aggcagtccg
     7981 gatgcccaga ttcgttcgcg aaccagtggc ataacgccac gcaacctgcc gctttcccac
     8041 acggaaatta cgttgatttt ggtttcaggt gcaaaggccg tgaggtaagc gagcggccat
     8101 tccggacgat agaagatgtc atcacccgtc tcgtcgcaaa ggccacgcca gtcagcaccc
     8161 aactgctcta tgacttcaat gccgccttca tccacgcgga caaagaaacg ctcccccggc
     8221 ctggtctcgg ccgcggtgat gtttgagggt ctatctgaca caattacttc cctcattgga
     8281 gcccttccga cacattcaca aagctgattc ccacgaattt tcggagattc taacccagct
     8341 ttaactccat gacagtccgg aaagtgcctt agcccaagat gacttgagta acctaagcaa
     8401 aacctgaagc agcgttggcc tctatttcga cgccgctctc ggctgggccg tcacatcact
     8461 gaaagagaac gcgatagcga tattgggcca gttttgcccg cccagttcgg catatgggta
     8521 gaccatgtag ttcagccgtt ccccgttctg tttggggctg agctcaaggt cccgccccac
     8581 ggtgaattga atgcggttgc tatcgtgcgc gccgaagaag taatcctttt tctcctgatg
     8641 tttccaggct tcagagatgt ctaccggata ccagcccgca tctttcgtgt agaactcagc
     8701 ccagcagtga tagccggcaa tatctgacgt tgccttgtcc tcaggaatgg agaacccgat
     8761 ctcaaaccgc gcgggaatgt actgcgagcg ggccatggag atgaagacag agtgaaaatc
     8821 cgtgcagttg ccgcgtttgg agtcgcaggc ccagagggta tcgccgtgtc cccacccgct
     8881 tcctgttttg tcatacttca tcgtgttgaa gacgtagttg tagattgcgt gcgctttctc
     8941 catctccgac ataccgggcc gtacctgctc tttggcgagc tctgcgggtt ttccggtgat
     9001 gggaacaaga ttgtccggct gcaggaatcg gttgagctcg cggctttgtg ccgtctcctt
     9061 ttgggcgacc gcggccaggt gctcggtgcg caccacgtca tagcgcacag tgaagtggta
     9121 ctcaggcttt tcggctttgt cggcgtgagc ataaaagaac ctgttgccgt attctgactc
     9181 gctggtttcc ttgagcggca gatcgccctt cttctcaatc acatttacct gctggaactg
     9241 gtcagtgtgg gccatcggga accacacatc gagcggtttt ccgggatcgc tgactttaac
     9301 ggtgaacgaa taatcgaaaa cgaaatgccg cgatttcgga gcctgggcga taacgagact
     9361 ggcggataaa agcagaggca gcagcaatag cttgcgcatg ggagttcttc ctttcggctt
     9421 taagtggtga cggttagaga aacatccggc ccggagtttg cgagatcacc gtcaagtaaa
     9481 gccgaggaag aagcggggga acatgcggga gcgattctac ttaatcagcc gttcccctgc
     9541 caagagctct tcgtcactgc gggggcgcct tgaaaaacgg aagaaagtcg ttttccaggg
     9601 tggcgaaatc cgtggcgccc gcgtacttct tatagatccg tccgtcacgg ccgatcagca
     9661 acgtggtagg caggcccaga ataccgccga acgcatcggc gattttcgca tcgcccggaa
     9721 ctacgggata gttcacattc tttttgcggc agaaatcgcg cagctcgctt tcgatatctt
     9781 ccactgatat tccgatgacc tggaggcctt gcgagccata cttcgtctgc agggcggcga
     9841 actgcgggat ttcttcctgg cagggagcac accatgctgc ccaaaaattg accagtagta
     9901 ccttgccttt gtaatcagag atcgtgaact gtcggcccga gaggtcggtg agagttactg
     9961 caccaacccg cgcggggaga gaggcggctc ccgcttgctt ccgcggacgc aatccccaat
    10021 agaagactcc cagcgcgagc agtacggcac agatgatgac gaggcggcgc atctcgcaga
    10081 atcagattac tggccctttt ccaccggcag ccccttgtct gcccaactgg tgccgaaggt
    10141 cccggcaaga tagaggactt tgacgttcgt gaagccctct ttgtgcagtt catcataagc
    10201 gggacggata ttggggcagt gttcccacgg gcaacagccg cagtaaacca ctacgggcgc
    10261 gtcatgtttg attgaagcgg cacgcttgcg caactgctcg atgccgtccg ggcgcgcggt
    10321 ggcgccaatg tattccgcgc cgggaacgtg cgattgttga tagaacgcct tgggcccaac
    10381 gtaaagcacc acgggcttct gtcctccctt aagagctttg gccagatcct ccggctggat
    10441 cagctccgga cttccgggca gccaattccg tacgggacct tcttcttgtt tttgagccgc
    10501 agggccggtt tgattcgtgt cgcgtttttg agcagtggcg ccaagcgcgg tggcagccac
    10561 cacgatgaga gctgaagcca tagccagatt atgaagcgaa ttgggcgttt tcagcatgat
    10621 ccagaacagc tccaaaaaga aaggactggg ttgtgaactg acatcttagc gggtgagagc
    10681 cgggtgtgcc aacctgaacg gcgcccagca tccttccggc gaggcgacga ggccaagcaa
    10741 ctactgccag ggtaactact ggaagacatg cactttcagg acatcattca agaccaccgc
    10801 ctcgtctaga attgtgtgag cacatgatga atctaaagaa acttgccttc cttgcgcttg
    10861 tggcggcagc ggttgcactt gcgggctgtg actcggaacc gcaaaaatcc acgcctgcgc
    10921 aaaagaagac caacgaatac gaaaccgggc gctttgccct gcagaagctg attccctcag
    10981 cgcgtttgtg gtcccccgat gcgcaaccgg taacgcttga atcctcagcg tcatccgaag
    11041 ctctgggcca cgatggtaaa gccggcaact ggcgagctgt gttcggatcg gcgtcgcggc
    11101 gcaaggctga gccctttcta tggtcgggca tggccgatgc tcctcagaaa gttgaccacg
    11161 gcgtggaaga cagcttcaac ccgagcaatc gctcaacgca gccctgggac ctggcgtttc
    11221 ttaaaatcga tacggacaag gcttttgagg tggcacaaca gcacggcgga aaacagattg
    11281 tggagaaaga tccgaagacg cccgtttcct atcgcctcgg ctggaacgcc caggcgaacc
    11341 aactactttg gagcgttgtc tacggcgatt ccggcgcccg ccccactttt ctggtggatg
    11401 caagttcagg cgccttcgtc agaaaagagt agttactgtc ccagcatcgc cttgatctca
    11461 gcgatgttcc gtttcgcgtc cgcggccatg gggccgcttg gctgcatttc caaatatttt
    11521 ttgtaatact ggcgggccgg gtcgagccgc tgcatgccct gaaggctctg cgccagccta
    11581 aaataaatga ccgggtcctg cgtatccaaa cgcatggcgt gctcgaactg atcgcgggcc
    11641 tgatcgtact ggttgttggc gagaaacttt tctccatcgc gcatgtactc tgacgcctgc
    11701 ttctcctgac ccgcaacaac aggcgtgtcg aaatgcgccc cggttttcga atcgattcgc
    11761 gccagcgcct gtttcgagtc tggagccatg gggccgcgag gcaaaatttc cagatacttg
    11821 ctgtaagttt tgtaggcttc gtcccagagc tcgagcttct cttgcgtgac ggccaggccg
    11881 taagtggctt cagcatcgtt cggcttgtaa agcagagcgt cgtggaagcg gtcgagcgcc
    11941 gcacggtagt tcttttgctt caggtagaag tttcccacct caatgtcctt caccgcgcgg
    12001 tgcggatcgt aggggtaatt ctccggcgcg attgtcacct tacgggtggc tggagcggcg
    12061 ttcaggtcaa tcaaagagtc gcggctggag ctctctccct gcggctcatc atccagagac
    12121 ggagcaaccg ggctggcgct gggggtctga acggatttct gatcgggagg ctgggctcct
    12181 gtcccggact gctcgtcaga aggctggggg gcgggtttgg ccggccgctt ctccttctcg
    12241 tctttgcggg gttgaatgtg cggctggttg tccatggaat cctgggcgga ggcgcggatt
    12301 ccgaacaggc caagacacac gagggcgaag agagctaaga tcctgagcgg ctgggagaac
    12361 atgctgctat tttagcggaa agttaaaggc cgccagcatg actggcggcc ttttgatctg
    12421 cgcaaatgtc ccgggggagg agagacttct accggctcgg attaggagcg gtggtactct
    12481 gcgcagaagc cggagtttcc tgactggtgc tgttagtcat gaggcgaaca tccacgcggc
    12541 ggttcttggc gcggccatca gccgtgttgt tttccgcagt atagtggtct ttgcccaagc
    12601 caacgatata aatcttgtgg gcgggaacgc tcttggaaga gaggtattgc accactgaat
    12661 cggcacggcg ctcgctaagc ttatagttat acatggcgga gccgactgag tcggtgtcac
    12721 cttccaccac aaccagatag cccttggtgt tcggaatctc tgccaccagc tgatccagag
    12781 cggattttgc cttatcggtc agaatggcct tattgaaggc aaagtgaacg ctggtttcca
    12841 gcacagggcg atagttatcc aggttcgcaa cctgattgct cagcgtgtcc acgcgggtgt
    12901 tggcctgcgc ggcgagctgc tgggcctgat cggcgcggcc acgggccgca gccgccttct
    12961 ggtcggcttc gctggccttg gaatttacgc cctgaatgcc ctgctgggcg cgcgaatcaa
    13021 cgtcgcggat gtcacggttg ttcttcgccg tcaggtcatc cagagtgttg gttttgtcga
    13081 taatgggctg ggtctgctga cggacataat ttttgcttga acagccagcg ctgaacagca
    13141 tggcggcacc agccagcagc accagagaac ttgatctgaa attcatggga agacgctcct
    13201 taaagaccga ccgcggcgca gggtgggccg ctataaaaat ctaccgccct aaggtaaagc
    13261 aactcgcttg ccataggctc tctggtttga atccactgct aagctgtttt catccaatca
    13321 gttacggact gatgtccaaa gtggcgtcca gccgggagca gccctgacca tagaaatttt
    13381 actcactggt ttacctgtta acttgagagt taatccagag acaagcgatt gccaaaattg
    13441 ccaggatttg atgcagttcg tattcggctc ccacggcacg gcgatcagcg cagccgaatc
    13501 agaaatccgg ccggttagga ctcggctgtt caattccgac gattttggca attctggcaa
    13561 ttttggcaat ctagtgatgc agtccttcta agcgggaaag tttaccttgg atctcctcca
    13621 gaaaatccgg accatcccca cccagcccgg cgtgtacctg tacaaggacg ccgaaggcga
    13681 ggtcatttat gtgggcaagg ccaagagcct gcgcgcgcga gtgcggtctt attttcagga
    13741 gggagtggcg gaagccaacg ccaagaccgg atcgctgctg cgcgaggccg tcgatgtgga
    13801 gtacatcgtc gtcgccaata ataaagaggc attggcgctc gaaaacaacc tgatcaagca
    13861 gaaaaagcct cgcttcaaca ttcttctgcg tgatgacaag acttacccat atatcaagct
    13921 gacgctggcg gagcgcttcc cacgggttta cgtgacgcgc cgtttgaaga aagacggcag
    13981 cgagtattac ggaccgtatt tcccgggcaa tctggcctac cggatcgttg acctgatcca
    14041 ccggcacttc ctggttcctt cgtgcaaagt agacctctca cgctttcatc cgcggccctg
    14101 cctgcagtat tacatcaagc gatgccttgg gccgtgcgta cagaacctga ccacgccgga
    14161 gttctacgct gaagcagtgc gggacgtgaa gctgctgctg gagggccgcc agacggacct
    14221 tgcccgcgga cttcgcgcgc gtatggagca ggcggctgaa tccgaagagt acgaacgcgc
    14281 ggcgcgatat cgtgacctca tctctacagt cgaccaactt caggaaaagc agcgcatggc
    14341 agcggccgaa ggcgacgaca tggacgtttt cggctaccac tttgaaagcc aaatgttggc
    14401 ggtgaacgtg tttcacatgc gtggcggcaa ggtgctggac cggcgagaat ttttctggga
    14461 ggacctgccg gagtttgctt tgcccgaacc ggaaactcca accttgggag acggagtgcc
    14521 aattggagag tccgcggccg agggcggcca cccacctcat caagccaaaa ccgggcttgc
    14581 tgggggcccg ggccgcactc cacaacatcc agcgtttcat cctgggcaat tcttctccgc
    14641 gctgctcaag caggtttata tcgaccagca atacgtgccg cgcgacatcg tcgtgcccgt
    14701 agactttgaa gaccgtgccg aattggccga actcctggaa gagaaacgcg gcagcaaagt
    14761 ggaaatcctg atcccccagc ggggcgagaa gcggtcgttg atcgacctgg cagcgcagaa
    14821 tgcgaagcag tcttttgacc agcggttccg gatcatgaag ccgcaggcca aagctgtgca
    14881 ggaggcattg caggatgctc tgagccttcc tgagcttccc aggcggattg agtgctttga
    14941 catttcccac attcagggcg cggagacagt cgcttccatg gtggtgtggg aagacggcaa
    15001 gatgaacaag agcgagtacc gcaagttcat tgtgcgcacg gtggaaggcg tggatgattt
    15061 cgcctccatg cgcgaggtgg tagctcgccg ttacaagcgg ttgcgcgatg aaagccgaac
    15121 actcccaagt ctggtgctga tcgatggtgg actggggcag cttcatgcgg cggcgcaggc
    15181 gctggagtcg cttgagatca cgaaccagcc gctggcctcg atcgcgaaga aagaagaaat
    15241 catctacgtt tatgggcagg aagacgagcc tgtggttctg gagcggcact cgccggtgct
    15301 gcacctggtg cagatggtgc gcgatgaatc gcatcgcttc gccgtgacct tccatcgcaa
    15361 gcgccgccag atgcgtgacc gcgcttcaga gctgctggag attcccggca tcggcgagat
    15421 cacacggcaa cggctgcttc agcatttcgg cagtgttcgc gctgtccagc aggcggatgc
    15481 ggcggcgctg ggcgcgatcc tcaacaagac gcagaccgag gcggtgctga agcattttgg
    15541 gaaagcgatt tcgtagggga gactaagaaa tctctgatcc aaatagtgcc gcaaaatgcc
    15601 acttcggttt gccatcgaag gctgtagaat ctccgtcggt tatcgcggga gccaccattc
    15661 tcaaaccaaa gctgtgccag aaacgaggca gatatgcgtt ggctgtatct tgcagtttcg
    15721 gcagttctga ttgtcagcct tgcgggatgc ggcggcggta gcagttctac ccgagccccg
    15781 cgccatcgca aactccgcag ttcggcattg cttcaggaaa ctgggacatg attttgctct
    15841 ccctgccgcc tcaaggccca gtgcttgatc tgcacggtgg cggcaacctc gtccagaacg
    15901 gcaccacaat ttccgggatc atccatctag acggatcgcc gtgcttcgat ccagcggcgg
    15961 atgacatcat cgttaccgga tcagcagtgg gaagcgagaa ggcgtttgac ggagttatta
    16021 cgttgaagac agcgcccgta cggggccaga ctatcaccat cacttcaggc gctcttccac
    16081 ccccggcgcc gggagtcaac agcagtttta ccggcacctt cacgctcgcg ggcggaacct
    16141 gcgcgcccca aaccagcggc accatgaccg gcagcatggt tccatcggtc agcggtccat
    16201 ggaagggaaa cttcagcccc gctctggtgg gttctgcgcc cattggcgtg accgccaacc
    16261 ttagccaaac cggacctgac gcgcatggct tttttcagat caccggaaac ttttctttct
    16321 ccggttccac ctgtttcagt tccggcacgg ttacgagcag cagtgtgctg ggcgcgacca
    16381 ccagtctgac cctaacagcc aatgacggca gccaattgac gttctcgccg caattgacgt
    16441 cggcggctac aggcccgtca ctgaaggttt gtatgagatc cagactggag catgcagctt
    16501 caacagcggc gaaggtttgc tgaacaagca atgaagcgaa taccgctggt ttcagcagcc
    16561 agtccagacg acgcctactt acttggcttg aatgaatgct cagccggttg gagttccgag
    16621 gatcacaggc gggcgctcct gaaggcctac ccagcttcgc ggcaaagtga ttaggccgga
    16681 gccgcccacc cgacaattta cttcttcacc accgctccgg tctttgcgct cacgtagacc
    16741 gcataacctg acttgcgatc gccccacaag aacagccaga ccggctgcct gaattgcgcg
    16801 gcattaccca gagccacgga gacttccttc ccgggatttt tcttcagcca cgccgcagca
    16861 tcagcggaag cagtcttgaa agccgcatca gagtcaactg acacttcata ggtatcaaag
    16921 ggcaaagcat cgctggttgg gccgccccag ggcacggagt tgccgacgct cacgcctttg
    16981 taatgctcgg gcggtttggc gatggcgcaa taggtgaagg tacgcgattg atgttggctc
    17041 ggagaagcaa acgttgccga ccacaggacc gcattgccgg aatcaatggt tgtgccgggc
    17101 atgggcttgc tctggagcgt aagaggcagc agatcacgcg accatgtgcg ggccgtcttg
    17161 tacatttcaa agaaagccgt tttgccggtc acggattggg cagcttgaga cggagcattg
    17221 tctgttgatg tgttggcgga aacgaccgtc ggcggctggg gcgattgccc gcaggaaatg
    17281 agcaggaaca tggccgcgca ggccaccaga acgtgcaggc ggttgggacc cataagcacc
    17341 tcccatgtgt caccgcaccg gatttgtcac cctatatctt ctctcatctt agctatgcag
    17401 tgacgagcat cacaggttca caggggcgcc gctttgaaca gcgtagaatt accgcgatga
    17461 ttcacctgaa ccgttcaaag atcagcttca gcagcgccct tttgctgcta tgtctctcgt
    17521 ttatcaccct ggctgcgcag accccggcgc ctgccaccac tttccgcatt acgccgctgc
    17581 ggccggtcgc ggaactggaa aaggaggcgt tggcggcgca tcctccggaa gagaaaggcg
    17641 agttccggaa gagcgagctg gtggaattgg tgaagctcga tcccaccatc aagctggata
    17701 tccgctacgc cggcagcaac aacttcctga gcacgccgat ctactcacag gcgcgcgctt
    17761 tcatgcagag gccggcggcg gaggccctgg tacgggcact ccacgcgctc aaagaggaag
    17821 gctatggatt gctgatccat gacgcgtacc ggccatggta cgtaaccaag attttctggg
    17881 atgcaacacc ggatgacaaa aagatatttg tcgccgctcc caaggagggt tcaaaacata
    17941 atcgcggctg cgcggtggac ctgacgctgt atgacctgaa gacaggacag ccagtgcaga
    18001 tgcccagcgg ctatgacgaa atgtcgacgc gggcgtatgc ggattatgcg ggaggaacga
    18061 aggaggagac agcgcgtcgc gacctgctgc gccgagccat ggagcatgag gggttcacgg
    18121 tgtatccgca ggagtggtgg cacttcgatt acaaggactg gaaactttat cggatacaga
    18181 atgtgaggtt tgaggaaatc ggccgatcaa acggtcgatc gaacagaaga gcagctttga
    18241 ctctggccac gttcagcaac taacatcgcg ccaatccgcc atgtcttctt cttcggcaaa
    18301 atatatggcc gcgctcgatc aaggcaccac cagcacacgg tttatccttt ttgaccggca
    18361 aggccgcatg catgcgtgcg cgcagcgcga gcacgctcag gtctatccgc agcccggctg
    18421 ggtggagcac aaccctgatg agatatggga acgcacgcag caggtcatgg ctgatgccat
    18481 gcagcaagcc ggcgcgtcgt caaatgacat tgctgcggtc gggatcacca accagcgtga
    18541 aacaacggtt gtgtgggagc gacaaacagg aaaaccgatt gccaatgcca tcgtgtggca
    18601 ggacacgcgc gttgctgatg atgtcgcgcg cctgacgctg gaaaaaggcg agcacttctt
    18661 tcgcagccgc actggattgc ccgtctcaac ttacttcagt gcgctgaagc tgcgctggtt
    18721 gctggagaat gtgccagacg ctcgtacccg ggctgagcag ggcgagcttt tgttcggcaa
    18781 catcgattca tttctagtgt ggcgacttac cggcggacct gaaaaagggc ttcacctgac
    18841 agatgtaaca aacgccagcc gcactcaact aatgaacctg cgcacactgg catgggagac
    18901 tgagctgctg gaagcttttt ccgttcctcc gcagatgctg cctcgcattg ccgcaagtag
    18961 tgagctctac ggtgaaattg ctgatggtcc tcttgccggt gtgccgattg ccggaattct
    19021 tggcgaccaa caggctgcgc ttgtgggcca gacgtgcttc cagcgtggcg aagccaagaa
    19081 cacatacggc accggctgct tcctcctgat gaacactggc gagaagatgg tgccctcaaa
    19141 gcacggactg ctcaccacgg tcgcatacaa atttggtaag aacccgccat gctacgcgct
    19201 ggagggcagt gtcgccatcg ccggcgcgct ggtacagtgg ctgcgcgata acctcggcat
    19261 gatcaggacg agcggggaag tcgaagaact cgcccgttct gtggacgaca atggcggcgt
    19321 ttatttcgtg ccggccttct ccggacttta cgcgccttat tggaatgaag ctgcccgcgg
    19381 caccatcagc gggttgacgc gctacgccaa tagggcgcat atcgcgcggg ctgtgctcga
    19441 agccacagcc ttccagaccc gcgacgttgt ggaagcaatg gaaaaagatt caggcatcaa
    19501 gctggaagtt ctgcgcgtag atggaggcat gatcgccaat aagttgctca tgcagtttca
    19561 ggcagacatg ctcgaccggc cagttgtgcg cccggcaatc tcagagacaa cggcgctcgg
    19621 tgcagcctat gccgctggac tcgcggtagg cgccatcaat gggatcagtg agctccgtgc
    19681 tctgtggtct gctgcggaaa cgtggcggcc gcaactcgat ccggaaaagc gcgagcaggt
    19741 ctacgcccgc tgggaaaagg ccgtgagccg atcggtggat tggatttgat cttcacctaa
    19801 ccggctgcat cgtaacctga gggctggggc attcgcgaac gctttgcgtg catgcctgaa
    19861 aatccagctg cttgttcagg cacacctcaa cagcgaccaa ctcacccgta tggcaggaca
    19921 agcgaaaagc ggccgctgag gcgcgattgg cagaggcaaa atcagcttcc agttgctcac
    19981 ggggaacttg cttttgcgcg gtcaggttcc tgtacttcgg cgggacttca agttttttga
    20041 acgcgcgctc tgcgttcgcg aagtaatcct gagcagatag cccgctgcat gtcccgtgtt
    20101 tctcccactc gtgctggatc agggcggccc tggggtaata gtcctgcatc cgtcgcacca
    20161 cgtcagaagc aaccggactc gcaggcgcgc agctcagcgg tggttgtccg gagttcgatt
    20221 gcggccacag cccgtgcagc acgatagcag tgtggttccc ggtgcggcac tcgccggaat
    20281 ggtcggtggg atgttcggca cagtaatttg gcgcccatga aagcgagagc aggtaataat
    20341 caaagttcga gtcttgctgc tgctttggct tatgccggcg cgcaaccaga gttgcagcca
    20401 gcgcgaacac cacaatcgcg aacagataaa cacgataaat acggtaatcg cgcatcctga
    20461 gctcctgcaa cggcattgta atccatgaaa gagagtgtgg gggatcaagg ttcaatatcc
    20521 tacggttgct cccgaaaacg atccgcgtgg cgcgattcaa cagtggccac ctcgctggca
    20581 actaaagaat ccaacctccc ggaggtcttc ttccgtgaaa attccctttc tgctgggccg
    20641 gctgatcttt ggcggattct tcctttacaa cggcatcaat catttgaaag agcgcaggca
    20701 gctctcgcag tatgcgcaat ccaagaacgt gcccaaaccg gacttggcgg tcagcggatc
    20761 gggaatcgct ttgatcgcgg gtggcgcaag cgtgctgctc gggattaagc cgaaactcgg
    20821 gacactcgcc atcatcggtt tcctggccgg cgtctccccc accatgcaca acttctggaa
    20881 agttgaagat cccgcgcaac gcatgaatga catgatcaac ttcagcaaga acatggcact
    20941 tcttggcgcc gcacttgcgt tgcttgcggt ggaagaaccc tggccggcca gcgttcccgt
    21001 ggcccagcca gaagatcgtt accgcatgga agacattgtg gccgcgtagc acgctcacac
    21061 cggagatatt gtggatcgca gaaatttcct gaagggagtg gctgggagcg cgctcacagt
    21121 caaaatgagt ggagccggga tgcagcactc gaactcagcg caatcaaaca gcggaggcat
    21181 gatctatcgc actctgggca agaccggcga gaaggtctca gccatcggat tgggcggctt
    21241 ccacatcggc cagccgaagc tcagcgaaca ggacagtctc aagttgatcc gctcggcgat
    21301 cgatggcggt atcaccttca tggataattc ctgggactac aaccaaggag aaagcgaagt
    21361 ccgcatgggc aaagccctga aggacggcta tcgccaaaaa gtgtttctca tgaccaagct
    21421 cgacggtcgc accaagcagg aagcggcgaa gcagattaac gagtctctcc agcgattgca
    21481 gaccgatcac ctggacctgc tgcaacacca tgaggtcatc cgatttgaag accctgatcg
    21541 catctttgct gaagacggag ccatggaagc ggtgcttgaa gcaaagaagg cgggcaaagt
    21601 gcgctacatc ggcttcaccg gtcacaaaga tccgcacatc catctgtaca tgctggaact
    21661 ggcccggaaa aataactttc aattcgacac cgtgcagatg cctttgaacg taatggacgc
    21721 gcatttccgc agcttcgctc agcttgtgat tcctgaggcg cagaaaatgg ggctcggcat
    21781 tctcggcatg aagagcatgg ggagcggcgt catcttgaag agcaacaccg tgacaccggt
    21841 ggaatgtctg cagtacgctc tcaacctgcc cacttcggtt gttatcacgg ggatcgata
//
LOCUS       DASQYP010000088         6780 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_173912, whole genome shotgun sequence.
ACCESSION   DASQYP010000088 DASQYP010000000
VERSION     DASQYP010000088.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 6780)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6780)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6780
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_173912"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1340
                     /locus_tag="VE783_02895"
     CDS             <1..1340
                     /locus_tag="VE783_02895"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52369.1"
                     /translation="LLRYFNEKGSARSGDRDKTDCVITYLFRNPPASEDGPPVWQRPE
                     VDSSYFFVTQATLAFQGHLYKSLGDMEFSNMPQDHITLLQEFEYLYQELDEFRHFDQI
                     MDSNIVQRVRELKQSLGKSFYHPNALAQIAVWNDVFGRKFDELFHDAAKQIKTFAENV
                     QREGGSMLSRLEGDITVKQLAEVETGQLLAEDYQNAQDEFRKVSKFKKVVDSKRPGRT
                     AGPAPGYTPSSSATSPRAPIAPIAPPTTAAPANSSAMPAAPPSRSAVAPAQIKAEVLA
                     VPPSQAVNNAVQEGKLFSAKESIKEHVRTSEPTLAPIVQIKNTRITLSAAEVEAFKAD
                     YQGEKSFRADYANIMMSIVAYLSRMIVEVDEYNQKASSAYLWKPHADALAYLLTTMER
                     LSMEGESIMAVARARGLQEKATALKSSLDKVRDYGKTVSQTLQAQAAQPQAGS"
     gene            1435..1902
                     /locus_tag="VE783_02900"
     CDS             1435..1902
                     /locus_tag="VE783_02900"
                     /inference="COORDINATES: protein motif:HMM:NF018430.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1203 domain-containing protein"
                     /protein_id="HYX52370.1"
                     /translation="MVPIRIVAIPTKVAEFVRSSLKAPGYGHPAHREVAAGYGPCRHC
                     LHKFAVGEESRILFTYDPFFELESVPLPGPIFVHASDCRRYPEICDYPEQLRDLPALL
                     CAYGEARKLMHEIQVTDGTQPTVVNALLKRPEIRYLHVRDLSAGCYDFRVERA"
     gene            2145..3614
                     /locus_tag="VE783_02905"
     CDS             2145..3614
                     /locus_tag="VE783_02905"
                     /inference="COORDINATES: protein motif:HMM:NF012312.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HYX52371.1"
                     /translation="MEPTRRLPAIESEIPGRLDRLPWSGWHWRIVIALGITWVLDGLE
                     VTLAGAIGGVLKRPDALGLSDAQVGASATFYLAGAVLGALVFGYTTDRLGRKKLFTVT
                     LLLYLTATALTAFSWNFFSYALFRAFTGAGIGGEYSAINSAIDELIPARVRGRVDLII
                     NASFWIGAAIGAAATIGLLDTGILPIGLGWRFAFGIGAVLGAIIIFLRHAVPESPRWL
                     MIHGREQEAEAIIKGVEKEIEGHVLPPPDPKCKITIYPRTHTPLGEVWHTIAVEHRER
                     SLLGLTLMASQAFFYNAIFFTYALVLVTFYGLPEQKVGLYLFPFALGNFAGPLLLGHL
                     FDSIGRKKMITITYALSGVLLAISGWMFRQGMLSAMTQAIAWSVIFFVASSAASSAYL
                     TVSEIFPLEVRGFAIAIFYAIGTLVGGVAAPTIFGVLIQTKSATNLFYGYLAGAAFMI
                     AAALVEGLIGIKAERTALESISSPLSAAREAVLPPSEVA"
     gene            3718..4899
                     /locus_tag="VE783_02910"
     CDS             3718..4899
                     /locus_tag="VE783_02910"
                     /inference="COORDINATES: protein motif:HMM:NF012656.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HYX52372.1"
                     /translation="MPVFKFKGVDFIEFDGLLTEDEKLVRDTARRFVEENVVPIIEQC
                     NRDGRFPRELVKPLAELGFFGPNLKGYGCAGMSNIDYGLIMQELERGDSGIRSFCSVQ
                     SSLVMFPIHAYGSEEQKQKWLPAMASGEKIGCFGLTEPDFGSNPSGMRTRAKKVGNEY
                     VLNGEKMWITSGTVADVALVWAKSEAHNNRIRGFLVETDRPGFKADDVHGKWSLRASV
                     TSGLSLQDVKVPEENMLPGADGLKGPLGCLNQARYGISWGVIGAAMSCYDTALQYSKV
                     RKQFRDQPIASHQLVQEKLVWMISEITKAQLLALQVGRLKDAGTVGHQHISMAKRNNV
                     WMALECARMARDILGGNGIADDYPVMRHMMNLESVKTYEGTHDIHALIIGESITGISS
                     F"
     gene            4960..5991
                     /gene="glpX"
                     /locus_tag="VE783_02915"
     CDS             4960..5991
                     /gene="glpX"
                     /locus_tag="VE783_02915"
                     /EC_number="3.1.3.11"
                     /inference="COORDINATES: protein motif:HMM:TIGR00330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042132 - fructose 1,6-bisphosphate
                     1-phosphatase activity [Evidence IEA];
                     GO_process: GO:0006094 - gluconeogenesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class II fructose-bisphosphatase"
                     /protein_id="HYX52373.1"
                     /translation="MATQVANKQIDNLEGTMEFELALEFVRVVEEAAIASAHQMGTGD
                     GHTADHVATEAMRTTMDKVPMRGTIVIGEGERDEAPMLYIGEHVGFGWKDGAKFPEVD
                     IAVDPLEGTNLCATGAPGAITVLAASEKGGLLNAPDCYMEKLVVGPSCKGVVDLDAPV
                     AENLKAIARRLSRDVADLVVVVLDRPRHEKLIADIRKAGARIRLITDGDLSAGIAAAV
                     IGTGVHAVMGSGGAPEGVITAAAMRCLNGEILGRLIINTPELEERVKKMGITDKNKVY
                     TAKDLAPGKHLVFAATGVTDGALMKGVRFFGEGTRTSSIVMTRKSGKVRFVESIHLAN
                     RPDVKVRFA"
     gene            complement(6004..>6780)
                     /locus_tag="VE783_02920"
     CDS             complement(6004..>6780)
                     /locus_tag="VE783_02920"
                     /inference="COORDINATES: protein motif:HMM:NF013292.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isoaspartyl peptidase/L-asparaginase"
                     /protein_id="HYX52374.1"
                     /translation="GATRFGLAMGFPKENLLTEHSRKIWILWKETHSNQDWWGPGLSD
                     PNWKPPLPLDNSSELRDQPQHIQKMYAVAAEVGIPADRRFDAIHKVLNPPTGTINCST
                     LNAKGEMSSVTTTSGLAWKIPGRCGDSPIIGAGCYCDQDVGAAGATGNGEENIKVAGA
                     HTIVENMRHGMSPEEAGLDALRRIARNYNNDMTKLSYLNMFFYVLRKDGVHAGVSLWS
                     GRSDGRRRYAVHDGTKRYETAKFLFDGVAKDWPPMPKESK"
BASE COUNT         1418 a         1933 c         2000 g         1429 t
ORIGIN      
        1 ccctgctccg ctacttcaat gaaaaaggct ctgcccgctc tggcgaccgc gacaagactg
       61 attgcgtgat cacttacctt ttccgcaatc cgcccgcgag tgaggacggc ccaccagtat
      121 ggcagcgccc ggaggtcgac agctcctact tcttcgtcac gcaggccact ttggcttttc
      181 agggacactt atataagtcg ctgggcgaca tggaattcag caacatgccg caggaccaca
      241 tcaccctgct gcaggaattt gagtacctct accaggaact ggacgagttc cgccatttcg
      301 atcagatcat ggactccaac attgtgcagc gcgtgcgcga gttgaagcag tccctgggga
      361 aatccttcta tcatcccaat gctctggcgc agattgccgt gtggaatgac gtttttggcc
      421 gcaaatttga cgagctcttc catgacgcgg ccaagcagat caagaccttc gcggaaaatg
      481 tccagagaga gggtggcagc atgctctcgc gcctggaagg cgacattacc gtaaaacagc
      541 ttgccgaagt cgaaaccggt cagttgctgg cggaggatta ccagaacgcg caggacgagt
      601 tccgaaaagt atcgaaattc aaaaaagtgg tggacagcaa gcgtcccggc cgcaccgctg
      661 gaccggcgcc gggctataca ccctcgtcca gtgcaacgtc cccgcgcgct cccattgcgc
      721 ccattgctcc tcctacgaca gcagctccgg caaactcatc cgcaatgcca gcagcacctc
      781 caagccgttc cgccgtggcg ccggcgcaga tcaaggcgga agtgctcgcg gtgccgccat
      841 cgcaggccgt gaacaacgct gttcaggaag gcaagctctt cagtgcgaaa gaatctatca
      901 aagaacacgt caggacgtcc gaacccacgc tcgcgccaat cgtccagatc aagaacacac
      961 gcatcacgct ctccgccgct gaggttgagg cattcaaggc cgactatcag ggtgaaaaga
     1021 gcttccgcgc cgattacgcc aacatcatga tgtccattgt ggcgtatctc tcgcgcatga
     1081 tcgtggaagt ggatgagtac aaccagaaag ccagttcagc ttatctctgg aagccgcatg
     1141 ctgacgcgtt ggcttatttg ctgaccacca tggaacggct cagcatggaa ggtgagtcca
     1201 ttatggctgt ggcccgcgcc cgtggactgc aggagaaagc caccgcactg aagtcctcgc
     1261 tcgataaagt tcgcgactac ggcaagacag tctcgcaaac gttgcaggcg caggccgcgc
     1321 agccccaggc tggaagctaa aggtaagttc tgctttgacc gcaatccgcg gatagccttt
     1381 ggcatactcg ttccgccaca atcgtgacca ttgcacttca cgaaaggaag agaaatggtc
     1441 ccgattcgca ttgttgccat ccccaccaag gttgccgagt tcgtgcgctc ctctctgaaa
     1501 gctcccggct acggccatcc tgcgcataga gaagtcgccg ccgggtacgg tccctgccgc
     1561 cactgcctgc acaaatttgc cgtgggcgaa gagagccgga ttctgtttac ctacgatcct
     1621 tttttcgagc tcgaaagcgt cccgctgccc ggcccaattt ttgtgcatgc ttcagactgc
     1681 cgaagatatc cggagatttg cgattaccct gaacaactgc gcgatctccc cgctctgctg
     1741 tgcgcctacg gtgaagcaag aaaactgatg catgaaatcc aggtgaccga cggcacccag
     1801 cccacggttg ttaatgcgct gctaaaacgt cctgagattc gatatttaca tgttcgggac
     1861 ctgagcgcgg gctgctatga cttccgggtg gagcgcgcct gaaagccgga aacagcgatg
     1921 ccccgaaaac cacctgactc ctgccaagtc ctgcggctcc cggggcaccg gcgtgcgatg
     1981 ggaaactggc gcttgtttcg cggagttccg atcacaagcg ccgcctagct gtctggattg
     2041 gatgcgaata cgccaaagtg gctgtgcgtc gtaatgcgcc agagcttctg acctgccgcg
     2101 acttgagggg catctctggc tttcggtcct ccgtcttaac gtcggtggaa ccgaccaggc
     2161 ggctgccagc gattgagagc gagattcccg gacggcttga ccggctgcca tggagcggct
     2221 ggcactggcg cattgtgatc gccttgggga tcacatgggt gttggacggc cttgaagtca
     2281 cgctcgcagg cgcgattgga ggagttctga aacggccgga cgcgctcggg ttgagcgacg
     2341 cgcaggtagg agcgagcgct acgttttacc tggccggcgc agtgctaggt gcgctggtgt
     2401 tcggctacac aaccgatcgg cttgggcgca aaaaattatt cacggtcacg cttctccttt
     2461 atctcactgc aacggcgctt accgcattct cctggaactt tttttcgtat gcgctttttc
     2521 gggcatttac cggtgcggga attgggggcg agtattcagc catcaattcc gcgattgatg
     2581 agctgattcc tgcaagggtc cgcggccgcg ttgacctgat catcaatgcc agtttctgga
     2641 ttggagcggc catcggcgcc gctgccacga tcggcctcct cgataccggc attctgccga
     2701 ttgggctggg ttggcgattt gccttcggca ttggagctgt gctcggggca atcatcatct
     2761 tcctgcggca tgccgtaccg gagagcccgc gctggcttat gatccatggc cgcgagcagg
     2821 aagcggaagc gatcataaaa ggcgtggaga aagagattga aggccacgtg ctcccgccgc
     2881 cagacccgaa atgcaagatc accatctatc cgcgcactca cacccccttg ggcgaggtgt
     2941 ggcacacaat cgccgtggag caccgcgaac gctcgctgct gggcctgacg ctcatggctt
     3001 cacaggcctt cttttacaat gcgatcttct tcacctatgc gctggtgttg gtcactttct
     3061 atggcttgcc ggaacaaaag gtcgggctat atctgttccc gtttgcactg ggtaactttg
     3121 ccgggccgct gctgctcggg catctgttcg attcgatcgg gcgcaagaag atgatcacca
     3181 tcacttacgc cctttccggt gttctgctgg cgatcagcgg atggatgttc cggcaaggca
     3241 tgctcagtgc catgacgcag gcgatcgcgt ggtcagtgat tttcttcgta gcgtcgtcgg
     3301 ctgcgagttc ggcctacctg acggtgagcg aaatttttcc gcttgaagtg cgtgggttcg
     3361 caattgccat tttctatgcg atcgggacgc tggttggcgg cgtggcggca ccgacaattt
     3421 tcggtgtgct gatccagaca aagtctgcaa ccaacctttt ttacggctat cttgccggag
     3481 cggcattcat gattgccgcc gccctggttg agggactgat cggtattaaa gccgagcgca
     3541 ccgcgctcga atcaatcagc agcccgcttt cagcggcaag agaggcggtg ctgccgccct
     3601 cagaggtggc gtaagcgctt ggagttttgc taccttggag ggtttgatct gagcgggcct
     3661 cccccaccgg caagccttcc cgctccacaa gacatttcat tcaaaggaaa atttgttatg
     3721 cccgtattca agttcaaggg tgtggacttc atcgaattcg atgggctgct cacggaagac
     3781 gaaaagcttg tgcgcgacac cgcacgccgc ttcgtggaag aaaatgtggt gcccattatt
     3841 gagcagtgca accgcgatgg ccgctttccc cgcgaactgg tgaagccgct ggctgagctc
     3901 ggctttttcg gcccgaattt aaaaggctac ggctgcgccg gaatgtcgaa catagattac
     3961 gggctcatca tgcaggagct ggaacgtggg gatagcggca tccgctcatt ctgcagcgta
     4021 cagtcttcgc tggtaatgtt tcccattcac gcctacggca gcgaagaaca gaaacagaag
     4081 tggctcccgg caatggcttc gggagagaag atcggctgtt tcggcctcac cgaaccggat
     4141 ttcggatcta atcccagcgg aatgcgcacc cgggcaaaaa aggtgggtaa tgaatacgtt
     4201 ctcaatggcg agaagatgtg gatcacctcc ggcaccgttg cggacgtggc gctggtatgg
     4261 gccaagtcag aggcgcacaa caatcgcatc cgcgggttcc tggtagaaac cgaccgcccc
     4321 ggcttcaaag cagatgatgt gcatggcaaa tggtcgctgc gcgcatcggt gacctcaggc
     4381 ttgtccctgc aggacgtgaa agtgccggaa gaaaacatgc tgcccggagc cgacggactg
     4441 aaaggtccgc tgggctgcct taatcaggca cgttatggca tcagctgggg ggtgattggc
     4501 gcagccatgt cctgctatga cacggccctg caatattcca aggtccgcaa gcagttccgc
     4561 gaccagccga ttgcatctca tcagcttgtt caggagaagc tggtctggat gatcagtgag
     4621 atcaccaaag cccagctcct ggccctgcaa gtgggacggc tcaaggatgc aggcacggtc
     4681 ggacaccagc acatctccat ggccaagcga aacaatgtct ggatggcgct ggagtgcgcg
     4741 cgcatggccc gcgacatcct gggcgggaac ggaatcgccg acgactaccc ggtgatgcgc
     4801 cacatgatga acctggagtc ggtaaagacc tatgaaggca cacacgatat tcacgccctc
     4861 atcattggcg agagcattac tggcataagc agcttctaag tcgcagcaaa tcgggctcag
     4921 caatagacgt agaatttcag tcctctaatg gaggtggtta tggcgactca ggtggccaac
     4981 aaacagattg ataaccttga aggcaccatg gagtttgagt tggcgttgga atttgtccgc
     5041 gtggtggaag aagccgccat tgcctccgct caccagatgg gaaccggcga tggccatacg
     5101 gctgaccatg tcgccaccga agccatgcgc accaccatgg ataaagtccc catgcgtggc
     5161 acgatcgtga ttggcgaagg cgagcgggac gaagctccca tgctgtatat cggtgaacac
     5221 gtcgggtttg gctggaaaga tggcgccaag ttcccggagg tcgatatcgc tgtggacccg
     5281 ctggaaggaa ccaacctgtg cgccaccggc gcgcccggcg cgatcaccgt gctcgcggct
     5341 tcagaaaaag gcggcttgct caacgcgcct gactgctata tggaaaagct ggttgtcggt
     5401 ccttcctgca agggcgtggt agatctggac gcgcccgttg cggaaaacct gaaagcaatt
     5461 gcgcggcggc tgagccgcga tgttgctgac ctcgtagtcg tcgtcctgga tcggccacgg
     5521 catgagaagc tcattgccga cattcgaaaa gccggagcgc gcatccgact gatcaccgat
     5581 ggtgaccttt ccgccggaat cgccgcggcc gtgatcggaa caggcgttca tgccgtgatg
     5641 ggtagtggcg gagcgccgga aggcgtgatc accgcggccg ccatgcgctg cctgaacggc
     5701 gaaattctcg gccggctcat catcaacacg ccggaactcg aagaacgggt gaagaagatg
     5761 ggcatcaccg acaagaacaa ggtctataca gccaaagacc ttgctcctgg aaagcatctg
     5821 gtgtttgccg ctacaggcgt gaccgacggc gcgctgatga aaggcgtccg cttcttcggt
     5881 gaaggcacgc gaacgtcatc aattgtaatg acccgcaaga gcggcaaagt gcggtttgtg
     5941 gagagcatcc atttggcaaa tcgtccagac gtgaaggtac gctttgcgtg atgtaattaa
     6001 ttactatttg ctctctttcg gcatcggcgg ccagtccttc gcaacgccat caaacaggaa
     6061 ctttgccgtc tcgtagcgtt ttgtgccgtc gtgtacggcg tagcggcggc gtccatcgct
     6121 gcggccggac cataacgaca cgccggcatg cactccgtcc ttgcgcagca cgtaaaagaa
     6181 catgttgagg taggagagct tcgtcatatc gttgttgtaa ttgcgggcaa tgcgtcgcag
     6241 tgcgtcgaga cccgcttcct caggtgacat gccgtggcgc atgttctcca caatcgtgtg
     6301 cgcgccggcg accttgatat tctcttcacc gtttcccgtc gcgcccgcag cgcccacgtc
     6361 ctgatcgcag tagcagcctg cgccgatgat cggtgagtcg ccgcagcgcc ctgggatctt
     6421 ccacgcaagg ccgctggtag tggtcacgct ggacatctcg cctttggcgt tcagggtcga
     6481 gcagttgatc gtgccggtcg gcgggttgag aactttgtgg attgcatcga aacgccggtc
     6541 tgccggaatg ccaacctcgg cagcaaccgc gtacatcttc tgtatgtgtt ggggctggtc
     6601 gcgcagttcg ctgctgttat ccaaaggcaa agggggcttc cagttggggt cggaaaggcc
     6661 agggccccac cagtcctggt tggaatgcgt ttctttccag aggatccaga ttttgcgcga
     6721 gtgttcggtg agcaggtttt ccttgggaaa gcccattgcc aagccgaagc gcgttgcgcc
//
LOCUS       DASQYP010000089         5365 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_174072, whole genome shotgun sequence.
ACCESSION   DASQYP010000089 DASQYP010000000
VERSION     DASQYP010000089.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 5365)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5365)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5365
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_174072"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(67..1665)
                     /locus_tag="VE783_02925"
     CDS             complement(67..1665)
                     /locus_tag="VE783_02925"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HYX52375.1"
                     /translation="MSLRILFADDSVTAQNMGKKILTEAGYDVVAVSNGAAAVKKIAE
                     QKPDIIILDVYMPGYSGLEVCEKVRSSLATIKTPVLLTVGKMEPYKAEDANRVRADGV
                     IIKPFEASDLLAIVKKFEERIAQMPAPVAPAPAVPVRRPVEDIPEFEARHPEPTPTAV
                     MQPMVEVPDHMATSSAFSDLLGSDSAPVPIPQAPLPISQLAETAAANFDVPVSWRQEV
                     EPEPTVVAPPQASDTQVIEPVEEVPAVASAPVVAAPEPDPVLAAVVRAVPIPVFQDPA
                     APPLSYDMVPTSAGPIGDIDIPREPSLQESAEETTRNTVADEREPGLVPTSAAAEEQP
                     ATVHAEGMESATTQLPVQEQEPQPAVLQPQVAMEAAAGAEHSTPSLSDADFEARVAAA
                     MAAYGNGSSAGAVAHAATVVTSEPEPAEPPATAAPVAEPEAPAPAATFEYQPPVQNAP
                     VEAAIEEPQMAEPVAEPAQEATDHAAIAAKVEEELPKAAAAVAEAAAANPAEHENIAQ
                     VVHRVMERMKGDLVEEIVRELRKK"
     gene            complement(1820..3151)
                     /gene="bamD"
                     /locus_tag="VE783_02930"
     CDS             complement(1820..3151)
                     /gene="bamD"
                     /locus_tag="VE783_02930"
                     /inference="COORDINATES: protein motif:HMM:TIGR03302.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0019867 - outer membrane [Evidence IEA];
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0065003 - protein-containing complex
                     assembly [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamD"
                     /protein_id="HYX52376.1"
                     /translation="MLKKFIVPLALACTLLLAGGCHHKVQNPLANVDSKQPDKVLYDR
                     AMDSEKHGRYQEARTLLETLINTYPDSEFIARAKLGVGDSWYAEGGTAAWQQAEVEYK
                     DFQTFFPNLPEASEAQLKVANIHYRQMEKPDRDFAQAVRAEDEYKNLIQTYPDSPLVP
                     EAKQRLREVQEVLAERQYRIAHFYFLRNNLAASQARLESLVDSYPLYSGADEALLELG
                     DLYAKEAESMKKQANVPAAIREKIAANYQKRAIEAYSRIITRYPAMDRANDAKKRLAA
                     LNAPVPTPTADAMTESKAEEESRGSTGMVQGLKSNFQKHPLVAKAARVGEPNLAEEQV
                     KSAPALIQDLQNQMNASSNNTVGVETVRSGKGDAGPNQAPPSAKEVSGDNEGAPPTPA
                     PGQVNQAAGAAPQDQESANKATQAAAQNVSGTQDSTSKKKKKSALRKLVPF"
     gene            complement(3180..3854)
                     /gene="rpe"
                     /locus_tag="VE783_02935"
     CDS             complement(3180..3854)
                     /gene="rpe"
                     /locus_tag="VE783_02935"
                     /EC_number="5.1.3.1"
                     /inference="COORDINATES: protein motif:HMM:NF004076.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004750 - D-ribulose-phosphate 3-epimerase
                     activity [Evidence IEA];
                     GO_process: GO:0006098 - pentose-phosphate shunt [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribulose-phosphate 3-epimerase"
                     /protein_id="HYX52377.1"
                     /translation="MVEVAPSILSADFARLAEEVRAVAEGGATVLHVDVMDGHFVPNL
                     TIGPPVVASLRKATELPLDVHLMIENPDLYIPAFVDSGADWISVHQEACVHLHRTLDL
                     IRSHNVNAGVVINPATPVEMLSEVLGMVDHVLVMSVNPGFGGQKFIPSTLQKVRKLVE
                     MRETGRTNFRIEIDGGISTDTVTGAVRAGVEVLVAGNAIFGKGNPRENTQQLLRLARE
                     ATLQRV"
     gene            4111..4914
                     /locus_tag="VE783_02940"
     CDS             4111..4914
                     /locus_tag="VE783_02940"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HYX52378.1"
                     /translation="MPLVEVRNLTKTYRTESALGQPQREVRAVNGVSLDIEAGETLGL
                     VGESGCGKTTLGRMVLRLIEPSSGSIRFENQDLLAVSGGELRKLRRQMQIVFQDPFAS
                     LNPRMRVEQIVTEPLLIHEPGKRSRAELKAVAAEMMRAVGLDEAALQRYPHEFSGGQR
                     QRIGIARALILRPKLVVCDEPVSALDVSVGAQIVNLLKQLQRDFGLTYLFISHSMPVV
                     RYLSDRIAVMRGGEIVETGEAEKLTAAPQHEYTRTLIEATPEPEFTAGA"
BASE COUNT         1097 a         1526 c         1564 g         1178 t
ORIGIN      
        1 gcaaacgagg gtaaaaggaa aagggacgcc gctgcgggcg tccccctcga aaaaaatcct
       61 gtttgtctac ttcttgcgca gttctcgaac gatctcttcc accaggtcgc ctttcatgcg
      121 ttccatcacg cgatggacca cctgggcaat attctcatgc tcggcggggt tggcggctgc
      181 ggcttcagct accgcagcgg cagctttcgg caactcctct tcgaccttgg ctgcgattgc
      241 cgcatgatcc gtggcttcct gtgcaggttc agcaaccggc tcagccatct gaggctcttc
      301 tattgcggct tccacaggag cattctgcac gggcggttga tactcgaagg tggccgcagg
      361 ggcaggcgct tcgggttcgg ctacaggagc ggcggtcgca gggggctcgg cgggttccgg
      421 ttctgacgtt accaccgtgg cagcgtgagc aaccgctcca gcggatgatc cattgccgta
      481 ggcagccatg gctgctgcga cgcgtgcttc aaagtcggca tcggagagtg atggggtgct
      541 gtgctcggct ccagctgccg cttccatggc aacctggggc tgaagaaccg cgggctgcgg
      601 ttcctgttct tggaccggaa gctgcgtggt cgcagattcc atcccttcgg catgaacagt
      661 tgccggttgc tcttcggcag ccgctgatgt gggcaccaat cccggttcgc gctcgtccgc
      721 aacggtgttg cgggtagtct cttccgcgct ttcctgcagc gagggttcac gcgggatgtc
      781 aatgtcgccg attggacccg cagaggttgg caccatgtca taagagagag gcggagcggc
      841 tgggtcctga aacaccggga taggaacagc gcggacaacg gcggctaaaa ccggatcagg
      901 ctctggagca gcaacgacgg gcgctgacgc aacagccgga acttcctcga ctggttcgat
      961 gacttgcgtg tcagaagctt gcggcggagc aacaacggtc ggctcaggct caacttcctg
     1021 acgccacgag accggcacat caaaatttgc ggctgccgtt tccgccagct gcgatattgg
     1081 caatggcgcc tgcggaattg gaacaggggc actgtcactg cccagcaaat cactaaaagc
     1141 ggaagaagtc gccatatgat ccgggacttc caccatgggc tgcatcaccg ctgtgggcgt
     1201 tggctcagga tgacgagcct caaactcagg gatgtcttcg accggcctgc gtacaggaac
     1261 agctggcgca ggagcaaccg gagcaggcat ctgtgcgatg cgctcttcaa actttttcac
     1321 gatcgcgagc aggtcacttg cttcgaaggg cttgatgata acgccatccg cgcggacgcg
     1381 attcgcgtct tccgctttgt acggctccat tttgcccacc gtgagcagca ccggtgtttt
     1441 gatggtggca agagaggagc ggaccttttc gcaaacttcc agaccgctat aacccggcat
     1501 gtagacatca aggatgatga tgtcgggttt ttgttcggcg atcttcttta ccgcagcagc
     1561 gccattactg acagccacaa cgtcatatcc tgcttctgtc aggattttct tgcccatgtt
     1621 ctgggcggtt acgctgtcat cggcaaataa aattctgagc gacacttgtg aataccttca
     1681 aaacgggcag ggaacgagga caacttactg gtaattacct ttgaagtcaa tggagagacc
     1741 acctcagtaa cctcgtgagg tatacctcct aagctcacaa aagtactagc ccttccagcg
     1801 tccctgccct tgatggcgtt tagaacggaa ccagcttgcg gagagccgat ttcttcttct
     1861 ttttgctggt ggaatcctga gtgccactca cgttctgcgc ggcagcctgg gttgctttgt
     1921 tggcgctctc ctgatcttga ggtgcggcac ccgcagcctg attcacctgt cctggagccg
     1981 gcgttggcgg agcgccttcg ttatcgccgg aaacttcctt ggcggaagga ggagcctgat
     2041 ttggaccggc atctcctttc cccgagcgca ccgtttcgac tcccacagta ttgttggagc
     2101 tcgcgttcat ctggttctgc agatcctgga taagtgcggg agcgctcttg acctgctctt
     2161 ccgccagatt cggctcgcca acacgagcgg ctttggcgac caatggatgt ttctggaaat
     2221 tgcttttcag cccctgcacc attccggtgc taccgcggct ttcctcttca gccttgctct
     2281 cagtcatggc atcggctgtg ggtgtgggga ctggggcatt aagtgctgcc aggcgcttct
     2341 tggcgtcgtt cgcgcggtcc atggcgggat aacgagtgat gatccgcgaa taggcttcaa
     2401 ttgcacgctt ctgatagttg gcggcaattt tctcacgtat ggccgcgggc acgttcgcct
     2461 gcttcttcat cgactcagct tctttggcgt aaagatcgcc cagttccagc agagcctcat
     2521 ccgcgccgct gtaaagcggg taggagtcaa ccagagactc aagcctggcc tgcgaggccg
     2581 ccagattgtt gcgcaggaaa tagaaatgcg caatgcgata ctggcgctca gccagaactt
     2641 cctgcacttc acgaaggcgc tgcttcgctt ccggcaccag cgggctgtcc ggataggtct
     2701 ggatcaggtt cttgtactcg tcttcagcgc gaaccgcctg agcgaagtca cgatcaggct
     2761 tctccatctg gcgataatgg atattggcca ccttcaactg cgcttcagaa gcttcgggca
     2821 agttggggaa gaaggtctgg aaatccttgt attcaacctc ggcctgctgc cacgccgcag
     2881 ttcccccttc tgcgtaccac gagtcaccca cgcccagctt ggcgcgggca atgaattcgg
     2941 aatccgggta ggtgttgatg agcgtctcca gcagggttcg ggcttcctga tagcgcccgt
     3001 gtttctcgga atccatggcg cggtcataaa gcaccttgtc aggctgcttg gagtcaacgt
     3061 ttgccagcgg attctggacc ttgtggtgac agccacccgc cagaagtagc gtgcaggcga
     3121 gcgcaagggg gacgataaat tttttcagca ttcctacctc aaattgatgc actgggagct
     3181 cagacgcgtt gcagagtggc ctccctggcc agtctcagca actgctgcgt attttccctg
     3241 ggattgccct ttccgaagat tgcatttcca gcgaccagga cttcgacacc ggcacggacg
     3301 gccccggtga ccgtgtctgt gctgatgccg ccatcgattt caatccggaa gtttgtcctg
     3361 ccggtctccc tcatctcaac cagctttcgt actttctgga gagttgaagg aataaacttc
     3421 tgaccaccaa agccgggatt cactgacatt accagcacat ggtcaaccat acccagcacc
     3481 tcgctgagca tttccaccgg cgtggccggg ttaattacaa cgcccgcatt cacattgtgg
     3541 ctgcggatca ggtcgagcgt ccgatgtaaa tggacgcaag cctcctgatg cactgaaatc
     3601 cagtctgccc ctgaatcgac aaacgccggg atatacaaat ctggattttc gatcatcagg
     3661 tgaacgtcca gaggcagttc ggtcgctttc ctgagcgagg ctacgactgg cgggccgatg
     3721 gtgagattcg ggacgaaatg accatccatc acgtcaacgt gcagaacggt ggcgccgcct
     3781 tcagcgaccg cgcgcacttc ttccgcaagc cgggcgaaat ccgccgacaa aatggatgga
     3841 gcaacttcga ccaaaaggta ctctcttcag caggagttac taaattctaa caccctgagc
     3901 tgggctgagt ccccggaaaa tgctcaatta ggaaccagga ctcctaagga tcttacctga
     3961 gctcacggcc accttctccg ctggaagaac ggcgcacccc aatggttttg cagcctttca
     4021 ggaggtgttt tgaggctaag acaagggacg gattacctgc gttgagttcc gcaaacactt
     4081 tcacggtggt tggtttatat tgctccttcc atgccgttag tcgaagtcag gaatctgacc
     4141 aaaacttaca gaaccgaaag cgctctcggg cagccgcagc gcgaagtgcg ggcggtgaac
     4201 ggggtgtcac tcgacattga ggcgggtgag actctgggac tggtaggcga atccggttgt
     4261 ggcaagacta cgctcggcag gatggtgctg cgcctcatcg agccgagctc cgggagcatt
     4321 cgctttgaaa accaggatct tctggcagtt tcagggggag agctgcgcaa gctgcgccgc
     4381 cagatgcaga tcgtcttcca ggaccctttt gcctcgctca acccgcgaat gagggtagag
     4441 cagattgtta ccgagccgct gttgatccat gagccgggca agcgcagccg ggcagagctg
     4501 aaagctgtgg ctgctgagat gatgcgcgcc gtgggtctgg atgaggcggc tttgcagcgc
     4561 tatccccacg agttctccgg aggccaacgc cagcgcatcg gcattgcacg cgcgctcatc
     4621 ctgcggccca aactggtggt ttgcgatgag ccggtttccg cgcttgacgt cagcgtggga
     4681 gcgcagatcg tgaacctgct caagcagctt cagcgcgact tcggcctgac atacctcttc
     4741 atctcccatt ccatgccggt agtgcgctat cttagcgatc ggattgcggt tatgcgaggt
     4801 ggtgagatcg tggagactgg cgaggctgaa aagctcactg cggcgcccca gcacgaatac
     4861 acgcgaaccc tgattgaagc taccccggag ccggaattca ccgcaggtgc ttgagcaagc
     4921 caaaacggca cagatttgct tcagtctggg agtccggtga cgcatttttg acgttttaga
     4981 agctgccaaa acagggtaca ctggagcgcc atcaccccga aataaagaag ccaaggtccc
     5041 aacccagctt tgacggagtt gcttttgtcc gggaagagct ccaagtcgaa agagccagac
     5101 ctattgaagg gactctggat atccccgcgc ctggaggtga atcgcacccg ggcggcagga
     5161 gaaaaccttg atgccgcaac gggatcccgg tttttgaagc tggcggatat cgcactgggt
     5221 cacggcaaac atcacaagcc gcacaaacct caagggcaca ccgaagtggt tttagacaag
     5281 aagaagccgg ttgcggcaaa gaagcccggc caacgcggtg ctactggcgt ccgaggaacc
     5341 gtatccggcc gttgaaggtc ctgtg
//
LOCUS       DASQYP010000090        18930 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_108665, whole genome shotgun sequence.
ACCESSION   DASQYP010000090 DASQYP010000000
VERSION     DASQYP010000090.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 18930)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18930)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18930
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_108665"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..180
                     /locus_tag="VE783_02945"
     CDS             <1..180
                     /locus_tag="VE783_02945"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52379.1"
                     /translation="TKADMPPMPEPETPGSTPATPVRTAGSPATPAPAQTGTPAAPAA
                     KGNSEPAKSGPAPRK"
     gene            complement(301..765)
                     /locus_tag="VE783_02950"
     CDS             complement(301..765)
                     /locus_tag="VE783_02950"
                     /inference="COORDINATES: protein motif:HMM:NF019498.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HYX52380.1"
                     /translation="MKKILFATFLITVAAALAAAPSAHNAFTPDTVPYGPVPAFIPAG
                     AQLAVLEGDPSASTGDFTIRLKMPAGYKIPAHWHPKRENVTVISGSFKVGMGDSFDES
                     KMHVFPAGSFAYLDPDMHHYAMAVGGETVVQVHGMSPVQFNYIDPKEDPSKK"
     gene            950..2746
                     /locus_tag="VE783_02955"
     CDS             950..2746
                     /locus_tag="VE783_02955"
                     /inference="COORDINATES: protein motif:HMM:NF012698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix domain-containing
                     protein"
                     /protein_id="HYX52381.1"
                     /translation="MRNGTLSASVQPGNVLRFGVFELELRAGELRKSGLRIKLQQQPL
                     MILQSLVERSGELVTREELREKLWPAGTYVDFERSLNKAMVLLREALGDSADSPLYIE
                     TIPRKGYRFVAPVQGAARISNPGGAQQPTSIAVIPFLSLGASREKESLSLGFADALIT
                     ALGSQGQLLVPPTAAIMKYGPGTDPLQVSRDMSVQYVLHGNIQTAENQWRVSIQVFDA
                     LARKIAFSEKYDFHLDNIFDVQDRMAERVVETLQLHFRSPLPRSRDRYSKDPAAYDEL
                     MHALRDSSSDQRDARDRAIELLSKAVERDPEFALAHAILSYACAVKYFETDSNPLWLQ
                     NAETHCARALELDPDLAEAHLARAYILWSPARNFAHADAIAELQKALALQPNVQHANN
                     RLGTICAHIGRFAESRIFYERAHRLDPQSAVGRGVIQAYLWGGDLVSASREIDSWLNA
                     SPGHIYPVYYRPWPALLNGDVETAAAMVREAQQLFPKDPMIISLQGLVHAFREQREPA
                     LHCVQLACAQPRSFGHSHHTWYQIAGIYSLLGDSEQAMDWLERSVNTGFPCWPFFKTD
                     PAFRNLWQLPIFQNLTATLQEKFQSIELGVKS"
     gene            3273..4571
                     /locus_tag="VE783_02960"
     CDS             3273..4571
                     /locus_tag="VE783_02960"
                     /inference="COORDINATES: protein motif:HMM:NF012766.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Xaa-Pro peptidase family protein"
                     /protein_id="HYX52382.1"
                     /translation="MKSSRRRFLQTAGLATTAALAQPASLLNAQEASEKNLPEPIAKL
                     KSRKTEASPITPEERQQRLERARQLMTEKKLDAIMLSGGTSLVYFSGIHWWLSERLFA
                     MIVPAKGEPFYVSPAFEEDRAREQIVMGMGQQKAEVRTWQEDESPYERVAQGLKDRGV
                     TSGRLGMEETVNYVFAAGVADAAPALHITSATPVTAGCRMIKSKHELALMTLANQVTL
                     AAYEAAYRSTKEGMTQHDFAQMVAMAHERQGFQGGAGVQVGENSALPHGSARPQVIRE
                     GTILLMDGGCKVEGYESDISRTVVLGKPTDKMKRVFEIVHKAQSTALATAKPGVQCQA
                     VDAAARKVITDAGYGPDYNHFTHRVGHGIGMDGHEWPYLVRGNTLPLTPNMCFSDEPG
                     VYIRGEFGVRLEDDMHITENGAELFTPQSPSLEDPFGKAS"
     gene            complement(4976..6547)
                     /locus_tag="VE783_02965"
     CDS             complement(4976..6547)
                     /locus_tag="VE783_02965"
                     /inference="COORDINATES: protein motif:HMM:NF012664.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52383.1"
                     /translation="MTKFRPAVIVALFSVFSLSMISFAQQREREGRPAPSPAASPDTA
                     KPAPAEPKKDAAEQPPVVTHHEIHVGGKTLRYTATAGMMPLKNVETGDVEAHIFYMAY
                     TLDGQQADKRPLTFSFNGGPGSASVWLHMGAIGPKRVRMQADGMMPPPPYQLVDNEYT
                     WLDQTDLVFIDPVGTGYSRAVKRDQTKKFLGLRGDIESVGEFIRLYLGRYERWSSPLF
                     MVGESYGTTRAAGLSGYLVEHGIAFNGIMLISSILNFQTTDGSPGNDLPYVLFLPTFA
                     TTAWYHKKLGPEYQDFGKLRADVEAWALNGYADALAKGDRLSPQDRDAVADKLSHFIG
                     ISKNYIENSDLRVDEPHFTKELLRDQRKTVGRLDSRFTGSDRSGVSETAGFDPSMSAI
                     RPPYTAMFNQYVRTELGYKSDLEYYILGGGFRFDEWDWGVQRGGFPDTARALKDAFDK
                     NPFMKLFVGSGYFDLATPYFGTQYTLNHMGLDKSQHSRVSLGYYPAGHMMYIADDQLA
                     ALKKDVGTFIANALK"
     gene            complement(6637..6807)
                     /locus_tag="VE783_02970"
     CDS             complement(6637..6807)
                     /locus_tag="VE783_02970"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52384.1"
                     /translation="MARNPARTINRGSPGRHFALAMAVIFVVMIMMIFFTRNKNTASP
                     KVTTPTNQHRLP"
     gene            complement(6895..7656)
                     /locus_tag="VE783_02975"
     CDS             complement(6895..7656)
                     /locus_tag="VE783_02975"
                     /inference="COORDINATES: protein motif:HMM:NF024833.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YMGG-like glycine zipper-containing protein"
                     /protein_id="HYX52385.1"
                     /translation="MGLKWTASVFALAMALVTGAIAQGDGNSVQDSQDRPVLKTRPAG
                     QVPDAPPPGTSTSSPGAASGPIYGTAPNVLPEGKRFIIKLKDTLDTKKLNDGKHFKAE
                     LREDLITPGGLIIPKGRTVKGHVAQYEHGFTGARLMLAMDEIETRNGWVPLIASVTGV
                     PGDPSIKSIGDEGELSRKGPDKKRVIENAAIGAAVGAVGGSVIGGHKGAAIGAAAGAG
                     LGTGTGLLFKGNDMKLDKGTQLEVRLERDLTVPGR"
     gene            7885..8106
                     /locus_tag="VE783_02980"
     CDS             7885..8106
                     /locus_tag="VE783_02980"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52386.1"
                     /translation="MKNWLLPIAVLGISGLGLVCSTERGREQMRNVLNRWLEHGDPLG
                     EFNNFLEDRLDEIQQALDSLSKALEEPQG"
     gene            complement(8132..8410)
                     /locus_tag="VE783_02985"
     CDS             complement(8132..8410)
                     /locus_tag="VE783_02985"
                     /EC_number="4.2.1.96"
                     /inference="COORDINATES: protein motif:HMM:NF002017.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008124 -
                     4-alpha-hydroxytetrahydrobiopterin dehydratase activity
                     [Evidence IEA];
                     GO_process: GO:0006729 - tetrahydrobiopterin biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4a-hydroxytetrahydrobiopterin dehydratase"
                     /protein_id="HYX52387.1"
                     /translation="MALLSDAQIKQALPKLSGWAQNDKAIERNFEFADFKAAMVFVNK
                     IADVAEQANHHPDIDIRYNKVKLSLVSHDSGGVTDRDVRMAERINQAV"
     gene            complement(8508..9620)
                     /locus_tag="VE783_02990"
     CDS             complement(8508..9620)
                     /locus_tag="VE783_02990"
                     /inference="COORDINATES: protein motif:HMM:NF024878.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD domain-containing phosphohydrolase"
                     /protein_id="HYX52388.1"
                     /translation="MATERILVVDDEEPIREIISSMLTAAGYKTRQACSGMEALAILN
                     STGEFELMLSDLMMAEMDGIALLERSKEKYPDMPVIMVTAVHDISVALAAIRNGAYDY
                     LLKPFEREQLLAIVRRALEHRRLKLENRAYQSNLESLVAARTEQLRQAMTDLERSYDI
                     TLEALGDALDLKDAETEGHSKRVTAFTIAIARAMGLSGEKIRVIARGAFLHDIGKMAI
                     PDAILLKPGALTLEETEIMREHCFRGYQMLKKIPFLAEASEIVYAHQEKFDGTGYPRG
                     LKGEDIPLGARIFSVADTLDAITSDRPYRAARPIHVAREEVERFSGRQFDPEVVRHFL
                     EMPDTIWDDLRKEINSQIYKFTYPIKTLNVAVGKLT"
     gene            9820..13224
                     /locus_tag="VE783_02995"
     CDS             9820..13224
                     /locus_tag="VE783_02995"
                     /inference="COORDINATES: protein motif:HMM:NF024583.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HYX52389.1"
                     /translation="MLVLLAGAILLYRSFRENYLLAWIFGWISFTLGRLLVAVGAYPH
                     YDPLLFGVGYALFITGMGLFAASVFLYVDHRRFIWPVAAALAGSLVLGYFAYFGHAYN
                     TGFTRAFQISWRAVLAVAALQLLRSAWGRFAFGRWLLAVMLFLPHLHQSRPAPSDIWH
                     DVIADLLLGISMVLIVLDDSAVQIKRLNVLNTIADQIAASREFDPSIVLSQLMQITRA
                     RAAWYRVLQGDKLVLSAHRGLSSPFIEGAQTIDINRSVSGFALRESEVYVMRSTEATP
                     EMVNLLKADRIHHMLIVPVEGKSSQIGILALGVGQFRTHAENEKDFLKAAARQLGLAA
                     ENRQLVQQVVRSQSEWATTFDSIADGILVHDDDYKILRANDALLRRLNRERDDVVGQF
                     CHAVLPGAGINWNGCPYCAHQDCSGEMDPAFGGYSVVSTSALAGEHGSHGKVHVIKDI
                     TEARAAEERYSSLFNHMHEGVFTSTPDGKLLDCNEAFVRMLGYFSKEELLRLENVESL
                     YVDHEDRSKYRDEIERHGYIRNFEFKLRRRDGSEIFVIESSFATRGPSGRVERYQGVL
                     MDVTDTKRAEDEIRRRNRELYVLNNIAVTFNQSFDLDEILQLIMLQIIELLNADTASV
                     YLFEEETNTLLKRAGYGHRSAIVGDNDRFPLPENFVESLRRHRVEIIDHEAGMPLPPL
                     VQKIVEEEGLKAWMWVILWRKEKMLGVLATSSRQPRHFNESEESVVIAVGRQLATTIE
                     KIRLYHETKKAYEDLRRTQEQLLQSEKMSAVGQLISGVAHELNNPLTAILGYAQLLES
                     ETMEPRVSEYVLKLHKQAQRTQKIVQNLLSFARQQKPRRVHVDLRNVIEDTMALRDYD
                     MKVNNIVVQRDFQGPLPAVIADPHQLEQVYLNIINNAADAMLETSRGGVLNIRLFREN
                     GHVVSEFHDSGPGISDPKHVFDPFFTTKGVGKGTGLGLSICYGIVKEHGGEISAGNHP
                     QGGALLRVRIPVAEGEAPLTERDRIVARREPQLEGRVLLIDDEEAVLDYEREVLAAAG
                     LRVTTATSGRYAIELLEQEQFDGILLDNKIPGEVSSEDVYRYLEKNLPELLRKTVLVL
                     SNISDPEARAFVDATQVLCLVKPFEVADLLAAARRMLRRARVAAHS"
     gene            complement(13231..13917)
                     /locus_tag="VE783_03000"
     CDS             complement(13231..13917)
                     /locus_tag="VE783_03000"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HYX52390.1"
                     /translation="MSTLRVEIAKAFSTGNRVNFSLKVDFEAQHGVTVIFGPSGSGKT
                     TLLQCVAGLVQPDRGSIAMGNCTFLDTAKNINVAPQGRRTGYVFQDLALFPHMSAADN
                     VEFALRGNERDRKDKVARLLERFRLTGVASRRPRELSGGERQRVALARAFAIKPRLLL
                     LDEPFSALDDELKMQIIQDLKSWIAEERIPALFVTHDREEARALGERVLTVHEGQITG
                     EERPIVSAMS"
     gene            complement(13914..14585)
                     /gene="modB"
                     /locus_tag="VE783_03005"
     CDS             complement(13914..14585)
                     /gene="modB"
                     /locus_tag="VE783_03005"
                     /inference="COORDINATES: protein motif:HMM:TIGR02141.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0015412 - ABC-type molybdate transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015689 - molybdate ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdate ABC transporter permease subunit"
                     /protein_id="HYX52391.1"
                     /translation="MNWQAVVLTAQLATLTACILMVVGIPMALWLVFSPRRWKFLIEA
                     LVGMPLVLPPTVLGFYLLVAFGTSTPFGRWYRALTGSTLAFSFAGLLVASVLYSLPFA
                     VNPIAAAVRGVDARLIDAAHTLGAGKWKTYRRVVLPIAWPGLLTGFVMSFAHTVGEFG
                     VVLMVGGNIPGVTRTLSIDIYDRVQALDYASANQTALALLIFSYGLLCVVYLLNYKPS
                     LWSGQ"
     gene            complement(14598..15032)
                     /locus_tag="VE783_03010"
     CDS             complement(14598..15032)
                     /locus_tag="VE783_03010"
                     /inference="COORDINATES: protein motif:HMM:TIGR00638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HYX52392.1"
                     /translation="MIKIAYNRILLLMPLKPREAATRLGISYPTLKKWIYSGKIRTVV
                     TPGGHHRIPESELERFIPRAEVKSGPETRRNFRKISGRNQLIGRVLEVKVDGLLAQVR
                     LSIGGQIITSIITAEAVAEMGLRKNDVAAALIKSTEVMIVRP"
     gene            15239..16231
                     /gene="msrP"
                     /locus_tag="VE783_03015"
     CDS             15239..16231
                     /gene="msrP"
                     /locus_tag="VE783_03015"
                     /EC_number="1.8.5.-"
                     /inference="COORDINATES: protein motif:HMM:NF003767.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016667 - oxidoreductase activity, acting
                     on a sulfur group of donors [Evidence IEA];
                     GO_function: GO:0043546 - molybdopterin cofactor binding
                     [Evidence IEA];
                     GO_process: GO:0030091 - protein repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein-methionine-sulfoxide reductase catalytic
                     subunit MsrP"
                     /protein_id="HYX52393.1"
                     /translation="MLIKKSGDISSSEITSKSNYINRRKFITGAIATGAAIAGGLYLR
                     NSVDSPGNPVAVEASGNGGQKLTGITKSQFGTTEKPTSFKDITNYNNYYEFSTDKYRP
                     AGLSANFKTRPWTVAIDGMVKKPMTLDIDSVLKLSALEERIYRHRCVEGWSMVIPWVG
                     FPLSALIKKADPLASAKFVAFQTVLAPDQMPGQKAGVLDFPYVEGLRMDEAMHPLTIL
                     AVGLYDEVLPNVDGAPLRLVVPWKYGFKGIKAIVKVSFTDKMPPTTWNLMASNEYGFY
                     SNVNPTVDHPRWSQATERRIGDSLFAPKHPTLMFNGYADQVASLYAGMDLRKNF"
     gene            16231..16881
                     /locus_tag="VE783_03020"
     CDS             16231..16881
                     /locus_tag="VE783_03020"
                     /inference="COORDINATES: protein motif:HMM:NF013918.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-methionine-sulfoxide reductase
                     heme-binding subunit MsrQ"
                     /protein_id="HYX52394.1"
                     /translation="MIRVPDKAVRVLKVPVFLLCLAPLSLLVWKAWQQDLGANPVDVI
                     TRSTGKWTLVFLLLTLSVSPVRKLASMPWLVRFRRMLGLFAFFYGCLHLTTYVWLDKF
                     FDVHAMLHDIAKRKFITAGMTGWFLMLPLAITSTTGWIRRMGGKRWQRLHRLIYLSAL
                     AGVVHFVWLVKADLRRPLAYGSVLGVLLLYRFFISMTEKLKSRARARIPVASASGT"
     gene            17008..17172
                     /gene="gvpJ"
                     /locus_tag="VE783_03025"
     CDS             17008..17172
                     /gene="gvpJ"
                     /locus_tag="VE783_03025"
                     /inference="COORDINATES: protein motif:HMM:NF012944.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0012506 - vesicle membrane [Evidence
                     IEA];
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="gas vesicle protein GvpJ"
                     /protein_id="HYX52395.1"
                     /translation="MKTSNLEDLNVVDILDRVLDKGIVIDPSARVSLMGQDLHAMRSR
                     VVVESVMMAV"
     gene            complement(17244..18770)
                     /locus_tag="VE783_03030"
     CDS             complement(17244..18770)
                     /locus_tag="VE783_03030"
                     /inference="COORDINATES: protein motif:HMM:NF024583.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015291 - secondary active transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TonB family protein"
                     /protein_id="HYX52396.1"
                     /translation="MATQPTESKPRVRAGGDDLTVIAQRAQAFTNASGTAIALSEGNA
                     DEIVCRARSGSAAPEVGTALRVEGSFTGLCIQSGKELRCDDAETDTRVDTAAIRALGI
                     KSMVVTPIKDDNKVIGVIACFAPTAHAFTITHVAVLKTMSDQISVLLQKERRMREEGI
                     EPAAPAPRQAPGPVIVKPAPVSSTPVSSGPAVAAAPARTPVPVANKVEVRPAPLAAEV
                     ATPLAVPKFEEKQKPEIRASFGTFDSVAGEEKKSGGQSKLIGLVAMIAVVAAITFYFV
                     KGHKTAAASTSAAQPAAEAMNTPAQPQPGPVSNSGPAATVSTSSSSYTPSASTAASKP
                     APLQVEAKRAEKPAPKPQDKAAAPEPSQPKSEPMTVSLNSAPSRLHASSGQSSDVAPV
                     MMVGSSNASGALSSLTRPVTSTTPGMAQSELEPMKILKTVPPIYPEIAKLRRLSGDVV
                     VEVKVNKDGKVSGVKYISGQQVFTDAAADAVRQWKFKPAMLNGQPIEQSTQIKVAFHP
                     "
BASE COUNT         3902 a         5604 c         5299 g         4125 t
ORIGIN      
        1 accaaggcag acatgcctcc catgcctgag ccggaaactc cgggctccac gcctgccact
       61 ccggttcgca cggcaggatc accagccacg ccagctccgg cgcagaccgg aactcccgct
      121 gctccggcgg ccaaaggcaa cagcgagccg gcgaaatccg gcccggcgcc aaggaagtga
      181 tgccgtgagg ctcggaggcg accctcactc ttcctcggcg gccgggttcg tgaatcgcct
      241 caccctcacc gcacgaatgc cgcagccggc tcctacaggc tgcggctttc gccgaggcga
      301 ttacttcttt gatgggtctt ctttcgggtc gatatagttg aactgcactg gtgacatgcc
      361 gtggacctgg accacggttt ctcctccaac cgccatcgcg tagtggtgca tgtctggatc
      421 aaggtaggca aagctccccg ccgggaatac gtgcatcttg ctctcgtcga atgagtctcc
      481 cataccaact ttgaagcttc cggagatcac ggtcacattt tcacgtttcg ggtgccagtg
      541 cgccgggatc ttgtagcctg ccggcatctt cagacgaatc gtgaagtctc ccgttgatgc
      601 tgagggatcg ccttccagca ccgccaactg cgcgcctgcg ggaatgaagg ccggcacagg
      661 accgtaagga actgtgtccg gagtaaatgc gttgtgcgcg gatggagccg cagcgagagc
      721 ggctgccacc gtaatcagaa aggttgcgaa gagaatcttt ttcatgttgc gcctccgagg
      781 aagaactttg tggctctttc atttcggcca cgctgcgact atgcgcctct cttccacgcg
      841 cctcaatgca tcctgctgcc acatgagtgt taccggccag gttgctgaaa agaagagaat
      901 aagaagcgct tgttacctgc aagccgtagg aaggtgctag actgcgcgtt tgaggaacgg
      961 taccctgtca gcctcagtcc aacccggcaa cgtgctgcgc ttcggagtct ttgaactcga
     1021 gctgcgcgcc ggcgaactgc gcaagtccgg cctgcgcatc aagctgcagc agcagcctct
     1081 gatgatcctg cagtcattgg tagagcgctc gggtgagttg gttacgcgtg aggaactgcg
     1141 cgagaaactc tggcccgcgg gcacctacgt ggactttgag cgcagcctga acaaagcgat
     1201 ggttctgctg cgcgaggcgc tcggcgactc ggccgactct cctctgtata tagaaaccat
     1261 tccccgcaag ggttaccgct ttgttgctcc ggtgcagggt gctgcccgga tcagcaaccc
     1321 tggcggcgca cagcaaccaa cttcaattgc tgtgatcccg ttcctttctc ttggtgcctc
     1381 tcgcgaaaaa gaatctctct cgctcggctt tgccgacgct ctgatcaccg ctttgggcag
     1441 ccagggacag ctgcttgtcc cgcctacggc cgccatcatg aagtacggcc ctgggactga
     1501 tcctttgcag gtgagccggg acatgagtgt gcaatacgtg ttgcacggca atatccagac
     1561 cgctgaaaac caatggaggg tctcgatcca ggtctttgac gcgctcgcgc gcaagatcgc
     1621 cttcagcgaa aaatacgatt tccacctcga caacatcttc gacgtccagg accggatggc
     1681 cgagcgcgtc gtggagaccc tgcaactgca tttccggtcg ccgttgccac gcagccgcga
     1741 tcgctacagt aaggaccctg ccgcctacga cgagcttatg cacgccctgc gtgatagctc
     1801 gtctgaccag cgtgacgccc gtgatcgcgc cattgagttg ttatctaaag ctgttgagcg
     1861 agacccggag tttgcgctgg cccatgccat actctcttac gcctgcgccg tgaagtattt
     1921 tgagaccgac tccaatccgt tatggctgca aaacgccgaa acccattgtg cccgtgcgct
     1981 ggagcttgat cccgacctgg cagaggcgca tctggcccgc gcgtacatcc tgtggagccc
     2041 ggcgcggaac tttgctcacg cagatgcaat tgccgaactg caaaaagccc tggcgctaca
     2101 accgaacgtt cagcacgcga acaatcggct gggcaccatc tgtgcccaca tcgggcgttt
     2161 tgccgagtca cgaatctttt atgaacgcgc gcatcggctt gatccgcaga gcgcggttgg
     2221 ccgaggtgtc attcaagcat atctctgggg cggagacctg gtcagcgcga gccgggagat
     2281 tgattcatgg ctgaacgcca gtccagggca catctatcct gtctactatc gtccctggcc
     2341 cgcgctgctg aacggcgacg tggaaaccgc agccgccatg gtcagggaag cgcagcagct
     2401 tttccccaag gacccgatga tcatcagcct gcagggcctg gtgcacgcct ttcgcgaaca
     2461 gcgcgagccc gctctccatt gcgtgcaact agcctgcgcc cagccccgct cgttcggaca
     2521 ctcgcaccac acctggtacc agattgccgg gatttacagc ctgctggggg actcggagca
     2581 ggcgatggac tggctggagc gcagcgtgaa caccggcttc ccctgctggc cgttcttcaa
     2641 aactgatccc gcattccgca atctctggca attaccgata ttccaaaatc tcaccgcgac
     2701 cttgcaggaa aaattccagt caatcgaact tggcgtaaag tcttaactca ccgcggccga
     2761 tgatagctag gtgatgaaag tgtcaaatat gttccccgtt catactgtca accatgtggg
     2821 cggttcgtac gctttgtagc acaggcgcct cgcctgtgct ggagcgctgt tacctatcga
     2881 gtcattttta gcaacacctt tgagacacag aggaacagag gacacagagg gattgggatg
     2941 gattgtgtgc tgacacagcg tgacgtcgag aattcataat ggtgaaactc cctcgctctt
     3001 cctctgaaat cagaggcaaa acgaggctgc gcatagcttg gctgaagtct tcggcgtttc
     3061 gacacagcta tgctgacggc caaacttgaa ctcgataatt ctctgcgtcc tctgttcctc
     3121 tgtgtttcaa aggttttcgg gtttcttcct ccacggctgt cgcggtgaac aggtcattcc
     3181 ttccgatcac ccgatcacca gatcaccgga tcacccgatc ccccgatgac ctccgtgtta
     3241 atctttctgt tccccaagga gccccgttac caatgaaatc ctcgcgtcgc cgcttcctcc
     3301 agactgccgg actggccacc actgctgctc ttgctcaacc cgcatcattg ctcaatgcgc
     3361 aggaagcgag cgagaagaac cttcctgagc cgattgcaaa gctgaaatca cgcaaaacgg
     3421 aagcatcgcc aatcacgccg gaagagcgcc agcagcggct ggagcgcgcg cgccagttga
     3481 tgaccgagaa aaagctcgat gccatcatgc tcagcggcgg aacttcacta gtctatttct
     3541 ccggcatcca ctggtggctg agcgagcggc tctttgccat gattgtgccc gccaagggcg
     3601 aaccgttcta cgtctcgcct gcattcgaag aagaccgcgc gcgcgagcag atcgtgatgg
     3661 gcatgggaca acagaaggct gaagtccgta cctggcagga agatgagagc ccctacgagc
     3721 gcgtggcgca aggattgaaa gatcgcggcg tcacctccgg ccgtctgggc atggaggaga
     3781 cggtgaacta tgtgttcgct gcaggagtcg cagatgctgc tcccgccttg cacatcacca
     3841 gcgccactcc ggtcaccgcg ggctgccgca tgatcaagag taagcatgag ctcgcattga
     3901 tgacgcttgc caaccaggta acactggccg cctatgaagc cgcatatcgt tccactaaag
     3961 aaggcatgac gcagcatgac tttgcccaga tggttgccat ggcccatgag cggcagggct
     4021 tccagggcgg agcgggcgtg caggtaggcg agaactccgc tctgccgcat ggctcggcca
     4081 ggccgcaggt gattcgcgaa ggcaccattc tgctcatgga cggcggctgc aaggtggaag
     4141 gctacgaatc cgatatcagc cgcacggttg tgctcggcaa gccgaccgac aagatgaaga
     4201 gggttttcga aatcgtgcac aaagcacagt caaccgctct cgccaccgcc aagcccggcg
     4261 tgcagtgcca ggccgtcgac gccgccgcgc gcaaagtcat caccgatgcc ggctacggcc
     4321 ccgactacaa ccatttcacc catcgcgtgg gccacggcat tggcatggac ggacacgaat
     4381 ggccctacct cgtccgcggc aacactcttc cgctcacgcc caacatgtgc ttcagtgacg
     4441 agcccggcgt ctacatccga ggcgaattcg gcgtgcgcct ggaagacgac atgcacatca
     4501 ccgaaaacgg agcagagctg ttcacgccgc agagccctag ccttgaagat ccgttcggaa
     4561 aagcttctta accacaaagg acacaggaac acgaagtctg acctccgatc ccttcgtgat
     4621 gcttcgtgtc ctctctcgaa aatgcgaacg cgagccacta aggtctgtca cgcccgagac
     4681 ccgagcgccg caggcgcgaa atagcgcaag cccagtccgt ttccgaggcg agcgtgagcg
     4741 agctgaggaa taagggctgg gtaagctgtg aaacgagaga ctcctttctg ccgaaggcgg
     4801 tcgcgcagcg cagcggagcg ataaaaagcc cctttcgttt cgcacacccg attacgtgtt
     4861 tcagggacaa gccgggttgc gagaaactgt tttagccgcc ctaggacaga aaggcacacg
     4921 aacactgagc tccgattcgc ttcgtgatcc ttcgtgtcct ctgtggtaaa tggctttatt
     4981 tcaaagcgtt cgcaataaac gtccccacat cttttttcag cgccgcaagc tgatcgtccg
     5041 cgatatacat catgtgtccg gcggggtagt agcccagcga gacacgcgag tgttggctct
     5101 tgtccagccc catgtgattc agcgtgtact gcgtgccgaa gtacggcgtg gcaaggtcga
     5161 aataaccaga gccaacaaag agcttcatga acgggttttt gtcgaacgcg tctttgagag
     5221 cgcgagcagt atcagggaag ccgccgcgct gaacgcccca gtcccattcg tcgaagcgga
     5281 agccgccgcc cagaatgtag tactcaaggt ctgacttgta tcccagttct gtgcgcacgt
     5341 actggttgaa cattgccgtg tatggcggac ggatggcgct catgctggga tcgaaccccg
     5401 ccgtctccga caccccggag cgatcactgc cggtgaagcg gctgtcgagc cggcccacag
     5461 tcttcctctg gtcgcgcagc agctccttgg tgaagtgcgg ctcgtccacg cgcaggtcac
     5521 tgttctcgat gtagttcttg ctgattccga tgaagtgaga aagcttgtcg gccacagcgt
     5581 cacgatcctg cgggctcagg cggtcgcctt tcgccagcgc gtcggcgtag ccgttgagcg
     5641 cccacgcttc cacgtcagcc cgcagcttgc cgaaatcctg atactccggt cccagcttct
     5701 tgtgatacca cgctgtggtg gcgaaggttg gaaggaagag cacgtaaggc agatcgttgc
     5761 ccggcgatcc gtcagtggtc tggaaattca ggatgctgga gatcagcatg atgccgttga
     5821 aggcaattcc atgctccaca agatagcctg agagtccggc ggcgcgcgta gtgccgtaac
     5881 tttccccaac catgaacagc ggcgatgacc accgctcata ccgcccgagg taaagtcgaa
     5941 taaattcgcc cacggattca atgtctcctc gcaggccgag aaatttcttc gtctggtcgc
     6001 gcttcacagc gcggctgtag ccggtgccca ccggatcgat gaatacaaga tccgtctggt
     6061 cgagccaggt gtactcgttg tccaccagtt gatatggtgg cggaggcatc atgccgtcag
     6121 cctgcatccg tacccgcttg gggccgatcg cacccatgtg cagccaaact gacgcggagc
     6181 cggggccgcc attgaacgaa aacgtcagcg gacgcttgtc cgcctgctgg ccatcgagcg
     6241 tgtaggccat ataaaagatg tgcgcttcca cgtcaccggt ctccacgttc ttcagcggca
     6301 tcatgcctgc ggtggcggtg tagcgcagcg tctttccgcc aacatgaatt tcatgatgcg
     6361 tgaccacggg aggctgctct gctgcgtcct tttttggctc ggctggcgct ggtttagcag
     6421 tatcgggaga cgctgcgggc gacggcgcgg gccgtccttc gcgctcacgc tgctgcgcaa
     6481 atgaaatcat gctcaaggag aaaaccgaga acaacgcgac gatcacggca ggacgaaatt
     6541 tggtcatcag agctccagcg ggttttgacg tgccagcaaa aaagacgtgg ccagcaaaaa
     6601 caggtgagtc tatctggagg tcatgaaaag ggcaactcag ggcaggcggt gctggttcgt
     6661 cggcgtagtc actttcggag aggcagtatt cttgttgcgg gtgaagaaga tcatcatgat
     6721 catcaccacg aaaattacgg ccatggccag agcaaagtga cgtccgggcg agccgcggtt
     6781 tatggtccga gctggattgc gagccatcgg aaattagatg caggctgcaa aagcaaaggc
     6841 cgcgactgct tccatgctgc cgcggccctg cacaacctca ttgtttgatt ctctttagcg
     6901 tcccggcaca gtcaaatcgc gctccagccg aacttcaagc tgggtgcctt tgtccagctt
     6961 catgtcattc cccttgaata gcaggccagt tccggtgccc agacccgcac cggcagccgc
     7021 gccaatcgcg gcgcccttat ggccgccgat caccgaaccg ccaactgcgc ccaccgctgc
     7081 gccgatcgcg gcattttcaa tcacacgctt tttgtccggc cctttcctcg aaagctcgcc
     7141 ttcgtcgcca atcgacttga tcgatggatc gcccggcact cccgttacgc ttgcgatcag
     7201 cggtacccat ccgttgcgag tttcgatttc gtccatcgca agcatgaggc gtgctccggt
     7261 gaatccatgc tcatactgtg ccacgtgccc cttcaccgtt ctccctttgg gaatgatcaa
     7321 gcctcccggc gtgatcaggt cttcgcgaag ctcggccttg aaatgcttgc cgtcgttcaa
     7381 cttcttggta tccagcgtgt ccttcagctt gatgatgaag cgcttgccct ccggcaacac
     7441 gttcggagcc gtcccgtaaa tcggacctga cgccgctcct gggctgctgg tagaggtgcc
     7501 tggaggcggt gcgtccggca cctggcccgc cggacgggtt tttaggactg gccggtcctg
     7561 cgaatcctga actgaatttc cgtcgccttg tgcaattgcg cccgtcacca gcgccatagc
     7621 aagcgcaaag acggaggcgg tccatttaag gcccatgggg ttacctcgcg ggggctgaat
     7681 tttgagcaaa gtgctggcag gtgagatgca gctcccggcc agagaagctg ctcacccgcg
     7741 ttcaaatctt taaacccggt gagcggcgca gggttgcgca gggcagaagg acattaccaa
     7801 agtaactgta caatcgtacg actctcgggc atgctgaagg catcttaaca cttaggctaa
     7861 aggccctgaa cgaaagtgtg ggatatgaaa aactggctat taccgatagc agtacttgga
     7921 atcagcgggc tcgggctggt ctgttccacc gaacgcggcc gcgaacagat gcggaacgtg
     7981 ctgaatcgct ggcttgaaca tggtgacccg ctgggcgaat tcaacaactt cctggaagat
     8041 cgcctcgacg aaatccagca ggcactggac agcctttcca aggctcttga agagccccag
     8101 ggctgatcgc aacacccagg aaggggcttg atcaaacggc ctgattgatc ctttccgcca
     8161 tgcgcacgtc tcgatccgta actcctccgg aatcgtgcga caccagtgac aatttcacct
     8221 tgttatagcg gatatcgatg tccggatgat ggttcgcctg ctctgccacg tcggcgatct
     8281 tgttcacaaa aaccatcgcg gccttaaaat ccgcgaactc gaagttccgt tcaatcgcct
     8341 tgtcattctg cgcccagcct gaaagtttgg gcagagcctg cttgatctgt gcatcactca
     8401 aaagagccat cgttcacgtt cctcggcttt aaattctaat tgagcgaatc accgggcagg
     8461 aaaacctcca gattgcggtg ggaatggcgg cggaaaggtg gcagcgctta ggtgagcttg
     8521 cccacagcca cgttgagcgt cttgatcggg taggtgaact tgtaaatctg cgagttgatt
     8581 tccttgcgca ggtcgtccca gatcgtgtcc ggcatctcca ggaaatggcg cacaacttcc
     8641 ggatcgaact gcctgccgga gaagcgctca acttcttcgc gggccacgtg gataggcctg
     8701 gctgcccggt acggccggtc tgacgtgatg gcatccagcg tgtcggccac agaaaatatg
     8761 cgcgctccca gcgggatgtc ctcgcctttc aggccacgcg gatagcccgt gccatcaaat
     8821 ttttcctggt gcgcataaac aatctctgat gcctctgcaa ggaaggggat ctttttgagc
     8881 atctggtagc cgcggaaaca gtgctcgcgc atgatctctg tttcttccag cgtcagcgct
     8941 cccggcttga gcaggatggc atcgggaatg gccatcttcc cgatatcgtg caggaacgcg
     9001 ccacgcgcga tcacgcgaat cttctctccg gaaagcccca tcgcccgcgc aatcgcgatg
     9061 gtaaacgccg tcacacgttt ggaatggcct tcggtttcgg catccttcag gtcaagcgcg
     9121 tcacccagcg cttccagcgt aatgtcatac gagcgctcaa ggtctgtcat cgcctggcga
     9181 agctgctcgg tccgtgccgc caccagcgac tcaaggtttg attggtacgc acgattttcc
     9241 agcttcagcc ggcgatgctc cagcgcgcgc cggacaatgg ctagaagctg ttcccgttca
     9301 aacggcttca gcaggtagtc ataagcgccg ttgcggatcg cggcgagcgc tactgaaata
     9361 tcatggacgg cggtcaccat aatcaccggc atgtcaggat atttctcttt cgaacgctcc
     9421 agcagggcga ttccgtccat ctccgccatc atcaggtcag agagcatcag ctcaaattcg
     9481 cccgtgctgt tcaggatggc cagcgcttcc atgccggagc aggcctgccg ggtcttgtaa
     9541 cccgcagcgg tgagcatcga cgagatgatc tcccggatgg gttcctcgtc atcaaccacc
     9601 agaatgcgtt ctgtcgccat ttgggaaagg tctaccacgc tgagggagga agtttaatgt
     9661 acccgagagt tccggtaaat acaatggcca aacgcacaaa aagcaggtac caaaggtttt
     9721 ttatgatata agaagcgcaa ccaaagctga aatttccccg ttagaacggt atccatggat
     9781 ttggcgttac gtttcctatt gtccgccgag ggttccacct tgcttgtcct gttggcgggc
     9841 gccatcctgc tttaccgcag cttccgcgaa aactaccttc tggcctggat tttcggctgg
     9901 atttccttca ctttgggccg ccttttggtc gccgtgggtg cctatcccca ctacgatccg
     9961 cttctttttg gcgtcggtta cgccttattc atcacgggga tgggcctgtt cgcggcttca
    10021 gttttcctgt acgtggatca tagacggttc atctggcccg ttgccgcggc gctcgctggc
    10081 tctcttgtac tcgggtattt cgcttatttc ggtcatgctt acaacacggg atttacccgt
    10141 gcctttcaga tttcgtggcg cgcggtgctg gccgtagctg ccctgcagtt gcttcgttcc
    10201 gcctggggac ggttcgcttt cggccggtgg ctgcttgccg taatgctctt tctgccgcac
    10261 ctgcaccaga gccgccccgc tccctctgac atctggcatg acgtgattgc cgacctcctg
    10321 ctcggcatca gcatggtcct gatcgtgctc gatgactcgg ccgtgcaaat caagcggctc
    10381 aacgtgctga acaccatcgc tgaccagatt gcagcctcgc gcgagtttga tcccagcatt
    10441 gtactgagcc agctcatgca gatcacccgc gcccgtgcag cgtggtatcg cgttctccag
    10501 ggcgacaagc tggttttgtc tgcgcatcgc ggcctttcca gcccgttcat tgaaggcgcg
    10561 cagaccattg acattaaccg cagcgtcagc ggctttgctc tgcgggagag cgaagtctat
    10621 gtgatgcgct caactgaggc cacaccagag atggtcaacc tcctcaaggc tgaccgtatt
    10681 caccacatgc tcatcgttcc cgtggaaggg aagagctcac aaatcggcat cctggcgctg
    10741 ggagtcggcc agtttcgaac ccacgccgaa aacgaaaaag atttcctgaa agccgcggcg
    10801 cgtcagcttg gactcgcagc cgaaaatcgc cagcttgtgc aacaggtggt tcgctcccag
    10861 agtgagtggg ccacaacatt cgattccata gcggatggca tccttgttca cgatgatgat
    10921 tacaagatcc ttcgcgcaaa tgatgccctg ctgcgccgcc tcaaccggga gcgtgacgat
    10981 gtggttggcc agttctgcca tgccgtcctg cccggcgccg gcatcaactg gaacggatgt
    11041 ccctattgtg ctcaccagga ttgctcggga gaaatggatc ctgcattcgg tggctattcg
    11101 gtggtctcca cttcggctct ggccggcgaa catggcagcc atggcaaagt gcacgtgatc
    11161 aaggacatca cggaagcccg cgccgctgaa gagcgctaca gctcactgtt taatcacatg
    11221 catgaaggcg tgtttacttc cacgcctgac ggcaagttgc tcgactgcaa tgaagccttc
    11281 gttcgcatgc tcggctattt cagcaaggaa gagcttctcc ggctggaaaa cgtcgaatcg
    11341 ctctatgtgg accatgagga ccgcagcaaa tatcgcgatg aaattgagcg ccacggctat
    11401 attcgcaatt ttgaattcaa gctgcgccgc cgtgacggca gcgagatctt cgtaattgaa
    11461 agcagttttg ccacccgcgg tcccagcgga cgcgttgaac gctaccaggg cgtgctgatg
    11521 gacgttactg acaccaagcg cgccgaagac gaaattcgcc gccgcaatcg cgagctttac
    11581 gtcctgaaca acatcgcagt tacctttaat cagtcttttg atctcgatga aattctgcag
    11641 ctcattatgc ttcagatcat cgagctgctc aacgcggaca cggcgtctgt atacctcttt
    11701 gaagaggaaa ccaacacact gctcaaacgc gccggctatg gtcatcgcag cgcgattgtc
    11761 ggtgacaatg accggttccc gttgcctgag aatttcgtcg aaagcctccg ccggcaccgg
    11821 gtggaaatca ttgatcatga agccggcatg cccctgcctc cgctggtcca gaagatcgtg
    11881 gaggaagagg gtctgaaggc atggatgtgg gtcattctct ggcgcaagga aaagatgctg
    11941 ggagtgcttg ctaccagcag ccgccagcct cgccacttca acgagtcaga agagagcgtc
    12001 gttattgcgg tgggccgcca gctcgccact acgatcgaga aaatccggct ttaccatgag
    12061 accaagaaag cctacgaaga cttgcgccgc acccaggaac agctcctgca gagcgaaaaa
    12121 atgtctgcgg ttggccagct catctccggc gtggcgcacg agctgaacaa cccgcttacc
    12181 gccatcctgg gctatgccca gttgctggaa agcgagacca tggagccgcg tgtttccgag
    12241 tacgtactca agctgcacaa gcaggcgcaa cgcacgcaga agatcgtcca gaacctgctt
    12301 tcgtttgctc gccagcaaaa gccgcgtcgc gtgcacgtgg acctgcgcaa tgtgattgaa
    12361 gacaccatgg cgctccgtga ctacgacatg aaggtcaata acatcgtggt tcagcgtgac
    12421 tttcaggggc cgttgcccgc ggtgattgcc gacccgcatc aactcgaaca ggtttacctg
    12481 aatatcatca acaacgccgc tgacgccatg cttgaaacca gccgcggcgg cgtgctgaac
    12541 atccgcctgt tccgcgagaa tgggcacgtc gtaagcgagt tccacgattc tgggcccggc
    12601 atctccgacc ccaagcacgt gttcgatcca ttctttacca ccaaaggcgt gggcaagggc
    12661 actggcctgg ggctgagcat ttgctacgga atcgtgaagg agcacggtgg agagatcagt
    12721 gccggaaatc atccgcaagg cggcgctttg ctgcgggtgc ggattccggt tgcggaaggt
    12781 gaagctccgc tcaccgaacg ggatcgcatc gtcgcccgcc gggaaccgca gctcgaaggt
    12841 cgagtccttc tcattgacga cgaggaagct gtgctcgact acgagcgcga ggtgctggcc
    12901 gcggctgggc ttcgggtgac caccgccacc tccggaagat acgcaattga gttgctcgag
    12961 caggaacagt ttgacggcat tctgctggat aacaaaatcc ccggtgaagt ctcaagcgag
    13021 gacgtttatc gctacctgga aaagaacctc cccgagcttc ttcgcaagac tgttctcgtg
    13081 ctttcgaata tctcagatcc ggaagcgcgg gcattcgtgg acgctaccca ggttctctgc
    13141 ctggtcaagc cgtttgaggt cgctgacctg ctcgccgccg ctcgccgcat gctccgccgc
    13201 gcccgcgttg ctgcgcattc ttaggatttg ctagctcata gccgagacga tcgggcgctc
    13261 ttctccagtg atctgcccct cgtgaacggt aagcaccctc tctcccaggg cacgcgcctc
    13321 ctcgcgatca tgcgtcacaa acagtgcggg gatgcgctct tcggcgatcc atgatttcag
    13381 gtcctggatg atctgcattt ttagttcatc atccagagcc gagaatggct cgtcgagcag
    13441 gagcaagcgt ggctttatgg cgaatgcgcg cgccagcgcc acccgctgcc tttctccacc
    13501 cgaaagctca cgcggacgtc gagacgccac accggtcagc cgaaagcgct caagcagtcg
    13561 ggcaactttg tccttgcggt cccgttcgtt cccccgcaac gcgaattcca cgttgtcagc
    13621 agcgctcatg tgcggaaaca gtgccagatc ctgaaacaca taaccggtcc tgcgtccctg
    13681 gggagcaaca ttgatgtttt ttgcggtgtc caggaacgtg caattgccca ttgcaattga
    13741 gccgcggtca ggctgaacca gcccggcaac acattgcagc aaagtcgttt tgcccgatcc
    13801 agaaggaccg aagatcacgg tcacgccatg ctgagcttca aaatccacct tcaaagagaa
    13861 gttcacgcga ttgcccgtag aaaatgcctt tgcaatttcc acccgtagcg tgctcattgg
    13921 ccgctccaga gactgggctt gtagttcagc agatacacca cgcacagcag gccataagaa
    13981 aagataagca gcgccagagc cgtctgattg gccgaagcat aatcaagcgc ctgcacgcga
    14041 tcatagatat cgatggaaag cgtccgtgtc acgcccggaa tattcccgcc taccatcaac
    14101 acgacgccga actcgccaac ggtatgggcg aagctcatca caaatccggt gagtagtcct
    14161 ggccacgcaa tcggcagaac cactctccgg taggtcttcc atttacccgc tccaagcgtg
    14221 tgcgccgcat caatcaatcg cgcatcaact ccgcgcaccg ccgccgctat cgggttcacc
    14281 gcaaagggaa ggctgtacag tactgaagct accagcagtc cggcaaagct gaacgcaaga
    14341 gtgctccctg ttaatgcccg gtaccagcgt ccaaacggag tgctggttcc aaatgccacg
    14401 agcaggtaga acccaagcac ggttggcggg agcaccagtg gcattcctac cagggcttcg
    14461 atcaggaatt tccatcgccg cggagagaac accagccata aggccatggg aattcccacc
    14521 accatcagga tgcaggcggt gagcgtggca agttgggcag tgagaaccac cgcctgccag
    14581 ttcattgggc gcgctcctca gggacggaca atcatgacct cagtggactt gatcaaagcg
    14641 gcagccacgt cgttctttct cagccccatc tccgcgaccg cttcagccgt gatgatgctg
    14701 gtgatgatct gtcccccgat tgagagccgc acctgcgcaa gcaggccatc taccttgacc
    14761 tccagcaccc ggccgatgag ttgattgcgt ccgctgatct tgcggaagtt acgtcgcgtt
    14821 tccgggccgg atttcacttc cgccctggga ataaaccgct ccagttccga ttctggtatg
    14881 cgatggtgtc cgcccggcgt gaccaccgtt cttatctttc ccgaatagat ccactttttc
    14941 agggtgggat aactgatgcc aagacgcgtt gcggcttctc tgggcttgag cggcatgagc
    15001 aggagtatac ggttatatgc gattttgatc aacttgacgc ttcgtttgta gccgctgttg
    15061 ggaatggggc ggatagctca atccaaggtt ccttcaatcc cgtacctgga atgtaacttt
    15121 ttgacggcct gctcatctca agccatagga aatgcgtctc tgccgtgagc gggacatcta
    15181 tttatcatta aggtaatgcg cctcggcgga actggggcag ggaataaagg cacagcccat
    15241 gttgatcaag aaatccggcg acatctcatc atccgaaatc acctcgaaat cgaattacat
    15301 caaccggcgc aagttcatta ccggcgcgat cgccaccggc gccgccatcg ccggcggact
    15361 ctatcttcgc aacagcgttg attcgccggg gaaccccgta gctgtagagg cgtctgggaa
    15421 tggcgggcag aagctcaccg gcatcaccaa aagccagttc ggcaccacag aaaagccgac
    15481 ctcgtttaaa gacatcacca actacaacaa ttattacgag ttcagcacag acaagtatcg
    15541 tccagccggg ctgtcggcca atttcaagac tcgtccctgg accgtggcga ttgacggaat
    15601 ggttaaaaag ccgatgacgc tggacatcga ctccgtgctc aagctttcgg ccctggaaga
    15661 aagaatttat cgtcatcgct gtgttgaagg ctggtccatg gtgatcccat gggtgggctt
    15721 cccactttct gcgctcatta agaaggcaga tccactggca agtgcaaagt ttgtcgcctt
    15781 tcaaactgta cttgctcctg accagatgcc gggacagaag gcgggcgttc tcgattttcc
    15841 gtacgtcgag gggttgcgca tggatgaagc catgcaccct ctcacgatcc ttgctgtagg
    15901 gctctatgat gaagttcttc ccaacgttga cggcgccccg ttgcgcctgg ttgtgccctg
    15961 gaagtacggc ttcaaaggca taaaggcgat tgtgaaggta agcttcacag ataagatgcc
    16021 gccgaccacg tggaacctga tggcctcaaa cgaatacggc ttctactcca acgtcaaccc
    16081 tacggtcgat catccgcgct ggagtcaggc cactgagcgg cggattgggg atagcttgtt
    16141 tgcccctaaa catcccacac tcatgttcaa cggctatgct gatcaggtcg ccagccttta
    16201 tgcgggaatg gacctgagaa agaatttctg atgatccggg tgcccgataa agcggtccgc
    16261 gtgttgaagg ttccggtttt cctcttgtgc ctggcgcccc tcagcctgct ggtgtggaaa
    16321 gcatggcagc aggacctcgg ggccaatccc gtggacgtaa tcactcgctc cacgggcaag
    16381 tggacgctcg tttttctttt gctcacgctg tctgtttccc cagttcgcaa actcgcctcc
    16441 atgccgtggc tcgttcgctt tcgccggatg ctcgggctgt ttgcgttctt ttacggctgc
    16501 ctgcatttga cgacctatgt ttggctggac aagttttttg acgttcacgc catgctgcac
    16561 gatattgcca aacgcaaatt catcactgcg ggaatgacag gctggttcct gatgcttcct
    16621 ctggcaatca catccaccac aggatggatt cgtcgcatgg gagggaagcg ctggcagcgg
    16681 ctgcaccgtc tcatttattt aagtgccttg gctggcgttg ttcactttgt gtggttggta
    16741 aaagctgatc tgcgccggcc cctcgcctat ggcagcgttc tcggagtgct tcttctttat
    16801 cgtttcttta tatctatgac tgagaaactc aaatcacgtg cacgcgcccg catacctgtc
    16861 gcaagcgcgt caggaacgta gacgcaagct gggtttcttt tccattacga catcagcgca
    16921 ttatcaccag gcatcttagt tcttgtgagt gatcagtaca ccgcgcgtgt accctccggg
    16981 gtggctggca ctcagactgg agtcgtgatg aagacgagca atctggaaga tctgaacgtg
    17041 gtcgatatcc tcgatcgcgt gctggacaaa gggattgtca tcgacccttc cgcacgcgtc
    17101 tccctcatgg gacaggacct gcacgcaatg cgtagcagag ttgtggttga atcggtgatg
    17161 atggctgttt aagtccgatt aacttcaccc tgaaaagttt gaaggcgcac agacggtgcg
    17221 ccttcattat tttcctccgt gagttacggg tggaaagcta ctttgatctg agtgctttgt
    17281 tcaattggtt ggccgttcag catggcaggc ttgaacttcc actggcggac ggcatctgcc
    17341 gccgcatcag tgaacacctg ttgcccgctg atgtacttta cgccgctgac cttcccgtcc
    17401 ttgttgactt ttacttccac aactacgtct ccgctcaggc ggcgtagctt cgcgatctca
    17461 ggatatatgg ggggaaccgt cttcaggatt ttcatcggtt ccagctctga ctgtgccatt
    17521 cccggagttg tggaggtaac aggacgcgtc aaagacgaga gcgcccctga agcgtttgag
    17581 ctgccaacca tcatcaccgg tgccacatcg ctgctctgtc cggagctcgc atgcaggcgc
    17641 gatggggcgg aattcaatga cacggtcatc ggctcgctct tcggctggct cggctccggt
    17701 gccgcggctt tgtcctgcgg tttcggtgcc ggcttctccg ccctctttgc ttctacctgg
    17761 agaggagccg gttttgaggc tgccgtgctg gctgaagggg tatacgaaga tgaactggtg
    17821 ctcacagtcg ccgcagggcc cgaattgcta actgggcctg gttgaggctg ggcgggcgtg
    17881 ttcatagctt ctgccgccgg ttgtgccgca ctggttgatg cagccgccgt cttgtggccc
    17941 ttgacgaagt aaaaggtgat ggcagccacg acagcgatca tcgcaaccag gccaatcagc
    18001 ttgctctggc cgccgctctt tttctcttca cccgcgacag aatcaaatgt cccaaaactg
    18061 gcgcgaattt ccggcttctg cttctcctcg aacttcggca cagcaagcgg agtggcaacc
    18121 tctgcggcca gcggcgccgg tctgacttca actttgtttg ccacaggcac cggcgtccgg
    18181 gcaggagcag ccgctaccgc gggtcccgaa gataccggag ttgaacttac gggcgccggt
    18241 ttcacgatta ccgggccggg agcctggcgc ggcgcaggtg ctgctggttc aatgccttct
    18301 tcgcgcatcc ggcgttcttt ctgcagcagc acgctgatct ggtctgacat ggtcttgagc
    18361 acggctacat gcgtgatcgt gaacgcatgc gcagttggcg cgaagcatgc aatcacgcca
    18421 atgaccttgt tgtcgtcctt gatcggggtc acgaccattg acttgatgcc aagcgcgcga
    18481 atggcagccg tgtccacgcg cgtatcggtc tcagcatcgt cgcagcgtag ttctttgccg
    18541 gactggatgc agagtcctgt aaaactgcct tccacgcgca gcgccgtccc tacttcaggg
    18601 gcggcggagc cgctgcgtgc acggcagacg atttcgtcgg cgttgccttc gctcagtgcg
    18661 atggcggtgc cggaagcgtt ggtgaatgcc tgggcgcgtt gtgcaatgac ggtcaggtca
    18721 tcgccgccgg cccgtactct gggttttgat tctgttggtt gggtcgccat ggttacgccg
    18781 tcctgcaaaa ctttttctcc tcaatgaccg caacgcatgg tttgctgcac gcgtcacgaa
    18841 tacctgaaca gcctggtgat aaccggaagt gctctatctg gtcttttcaa acatctggcc
    18901 cattcgaatc ggctttttgc acagccttat
//
LOCUS       DASQYP010000091         4291 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_300625, whole genome shotgun sequence.
ACCESSION   DASQYP010000091 DASQYP010000000
VERSION     DASQYP010000091.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 4291)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4291)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4291
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_300625"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..522
                     /locus_tag="VE783_03035"
     CDS             <1..522
                     /locus_tag="VE783_03035"
                     /inference="COORDINATES: protein motif:HMM:NF012936.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="asparagine synthase C-terminal domain-containing
                     protein"
                     /protein_id="HYX52397.1"
                     /translation="NCLEYADRMSMANSLEVRAPFTDYRLLEFAMRVPGNMKVRNMKT
                     KWITREAMRGILPQEVIDKKKMGFNPPLPQWINGELKPVIERFLSRDTVERRGIFRPE
                     AVQQLVEDHRQSRRDNALKIWALLMIEVWQRMYLDGQSEAEIQEQITGVKKMPVIPTV
                     AGKRRPAEVVSIQ"
     gene            541..1719
                     /locus_tag="VE783_03040"
     CDS             541..1719
                     /locus_tag="VE783_03040"
                     /inference="COORDINATES: protein motif:HMM:NF025025.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HYX52398.1"
                     /translation="MMAAQIGTGAGAAQIIFWAAVLLLFYVYAGYPLLLALLGEFFRK
                     PRPQPGYYPKLSVLIAAYNEEEAIEEKLRQTLALEYPVDKLEVVVLSDCSTDRTDEIV
                     KAYPDSRVRLLRVPERRGKTSAQNFGVRDARGEVIVFSDATAIYHPKALAYLATNYQD
                     AKVGAVSGRYKYFDPEDESPTGLGSSAFWNYENLIKTMQSRISTITGCCGCIYSVRKV
                     AYTELPDDIISDLVQPLQVIRKGYKVLFEDRALAYEETTKSTQEEFRMRIRVVTRAMR
                     GLLSVGDLLKPWKFPWPAFQLWSHKVLRWMVPVLLLIALASNVFLLDSRFFRIVMALQ
                     LAFYGLAILNLLAPLHKMWKPLGIPSYFCTLNAAALFSMIELGRGRKYVTWQTVRARR
                     "
     gene            1716..2501
                     /locus_tag="VE783_03045"
     CDS             1716..2501
                     /locus_tag="VE783_03045"
                     /inference="COORDINATES: protein motif:HMM:NF012760.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016742 - hydroxymethyl-, formyl- and
                     related transferase activity [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="formyltransferase family protein"
                     /protein_id="HYX52399.1"
                     /translation="MRIEFLTQEDSLYILPFFEEFLQNYAGQFEIGRISCCRAMGKRS
                     RGQLLRELFWLYGGIGLARLLMQAGIASVLAKLPRSRRAKKFYSIAQLAKAYGIPYEP
                     VANPNQAEFTKPLQERAPELLVSVACPYILKENVLSIPKKGCINIHHAPLPRYKGMMP
                     TFWQLFHGERQLGVTIHTMAAKVDEGEALLQESLPVTPGASLHELIRQSKRHGAHCMA
                     RVLRNLSENKAVPIRLEHEKGTYFTFPKREEALEFRRRGLRAI"
     gene            2517..3602
                     /locus_tag="VE783_03050"
     CDS             2517..3602
                     /locus_tag="VE783_03050"
                     /EC_number="3.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013672.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide deacetylase family protein"
                     /protein_id="HYX52400.1"
                     /translation="MLHRSSARVIAKTGWAAVLRGCGLLWLAKQWARRNGIIALTLHR
                     ILNDEEIAATASLPGMIVRRETFDEFLSYAKENLQVVDLAGEISWERRKRPAIALTFD
                     DGWCDNAAGGFPLARKHGAPMTVFVVPGRAGSQSPFWPEQTASVLGRRLGENISREEY
                     LEEVIERLKALPQAQRDAEMHRMFGAEDAHTAASVDRTMTWEEIERMHAGGVTFGSHT
                     CTHEILTRIPLERAEEEITHSRQAIEKRLGGECRLFAYPNGNSSQQVREMVQRAGYKL
                     AFVNDWPEVWTAATDPYQVPRVNVCEFHLIGVNGKFSPLIFEYAVLWSAVRNCWIHRV
                     TGTLRRLAAKLRVPSQESGELEAESKH"
     gene            3629..>4291
                     /locus_tag="VE783_03055"
     CDS             3629..>4291
                     /locus_tag="VE783_03055"
                     /EC_number="2.3.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013884.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyltransferase"
                     /protein_id="HYX52401.1"
                     /translation="MASPGLPSRRLASARVLPLTPAIPRMQADSANLDYLRTNAVLLV
                     MFFHLLIFFGKTQVGRFSIRPMGILGVFLFFVHTSLVLMLSLERQQAKLGNRRLWSAF
                     MVRRIFRVYPLSILAVSVIFFARLPLGHLEPGRLMITPMGIKGLLSNLLLVQNITDTG
                     SVLGPLWSLPYEMQMYVFLPALFLLARKLKSIRGLVLLWLATVCVALVHARFGHMPDL
                     VRY"
BASE COUNT          869 a         1122 c         1441 g          859 t
ORIGIN      
        1 aactgcctgg agtatgcaga ccgcatgtcg atggcgaact cgcttgaagt gcgggcgccg
       61 tttacggatt atcgcctgct ggaattcgca atgcgcgtgc cgggaaacat gaaggtgcgc
      121 aacatgaaga ccaagtggat cacacgcgag gcgatgcggg gcattctgcc gcaggaagtg
      181 atcgacaaga agaagatggg attcaatcct ccgctgccgc agtggatcaa tggcgagttg
      241 aagccggtaa ttgagagatt tctttcccgc gatacggtgg agcgcagggg gatcttccgg
      301 ccggaggcgg tgcagcaact ggtggaggac caccggcaga gcaggcgcga caatgcgctg
      361 aagatctggg cgctgctgat gattgaggtt tggcaacgca tgtatctgga tggtcagtca
      421 gaagccgaga tacaggagca gatcaccgga gtgaaaaaga tgccggtgat tccgaccgtc
      481 gcgggcaaga ggcggccggc ggaagtggtt tcgattcagt aggagagaac agtggcgggc
      541 atgatggcgg cacaaatcgg aacaggagca ggcgcggcgc agatcatctt ctgggcggcg
      601 gtgctgttgc tgttctatgt gtatgccgga tatccgctgc tgctggcgct tctcggcgag
      661 tttttccgca agccgcggcc gcagcctggg tactatccga agctgagcgt actgatcgcc
      721 gcatataacg aggaagaggc gatcgaagaa aagctgcggc agacgctggc acttgaatat
      781 ccggtggaca agctggaagt ggtggtgctc tccgactgtt cgacggatcg tacggatgag
      841 atcgtgaagg catatccgga cagccgggtg cgcctgctgc gagtgccgga gcggagaggg
      901 aagacttcag cgcagaactt tggcgttcgc gatgcgcgag gagaggtgat cgtgttctca
      961 gacgcgacgg cgatctacca tcccaaggcg ctggcttatc tggcgacgaa ctaccaggat
     1021 gcgaaggtcg gagcggtgag cgggcgttac aagtattttg atccggaaga tgaatcaccg
     1081 acggggctgg gcagttcggc gttctggaat tacgagaacc tgatcaagac gatgcaatcg
     1141 cggatcagca ccattacagg ctgctgcgga tgcatttact cggtacgcaa agtggcgtac
     1201 acggagctgc cggacgacat catcagcgat ctggtgcagc cgctgcaggt gatcaggaag
     1261 ggttacaagg tactgtttga agaccgcgcg ctggcttatg aggagaccac caagtcaacg
     1321 caggaagaat tcaggatgcg catccgcgtg gtgacacggg cgatgcgcgg actgctgagc
     1381 gtgggcgatc tgctgaaacc atggaagttt ccgtggccgg cgtttcaact gtggtcgcac
     1441 aaggtgctgc gctggatggt gccggtgctg ctgctgattg cgctggcgag caatgtgttt
     1501 ttgctggata gccggttctt ccgcatcgtg atggctttgc agttggcgtt ttacggactg
     1561 gcaattctga acctgctggc cccgctgcac aaaatgtgga agccgctggg gattccatct
     1621 tatttctgta cgctgaacgc ggcggcgctg ttcagcatga ttgagctggg ccgcggacgc
     1681 aaatacgtga cgtggcagac ggtgagggcg cgccgatgag aattgagttt ctgacgcagg
     1741 aagattcgct gtacatcctg ccgttttttg aagagttcct gcagaactac gcgggccagt
     1801 ttgaaattgg acggatttcc tgctgtcgcg cgatgggcaa aagatcgcgc gggcagttgc
     1861 tgcgcgagct gttctggctc tatggcggca ttggactggc gcggctgctg atgcaggctg
     1921 gaatcgcaag cgtgctggcg aagctgccgc ggagccggag ggcaaagaag ttttactcca
     1981 tcgcgcaact ggcaaaggcg tacgggattc cgtatgagcc ggtggcgaat ccgaaccagg
     2041 cggagtttac gaaaccgctg caggagcgtg cgccggagct gctggtttcc gtggcgtgcc
     2101 cgtacattct gaaggagaac gtgctgagca ttccgaagaa gggatgcatc aacattcatc
     2161 acgcgccgct gccgcgctac aaaggcatga tgccgacgtt ctggcagctc ttccacggcg
     2221 aacgccagct gggtgtgact atccacacga tggccgcgaa ggtggacgag ggcgaggcgc
     2281 tgctgcagga atcactgccg gttacgccgg gcgcgtcatt gcatgagctg atacggcaat
     2341 cgaaacggca tggcgcccac tgcatggcgc gcgtgctgcg caatttgagc gagaacaaag
     2401 ctgttccaat tcggctggaa cacgaaaaag gcacttactt cacttttccc aaaagggaag
     2461 aggccctgga gttccggcgc agaggtttgc gggccattta gggggatgga ccgagcatgc
     2521 tccaccgatc gagcgcgcga gtcatagcga agacaggctg ggcggcagtg ctgcgcggct
     2581 gcggactgct ctggctggcg aagcagtggg cgcgacgaaa tgggattatc gcgcttactc
     2641 tgcatcgcat tctcaacgat gaagagattg cggcgacagc gtcattgccc gggatgatcg
     2701 tgcggcgaga aaccttcgac gagttcctct cttacgcaaa agaaaatctt caggtggtgg
     2761 acctggcggg cgaaatttca tgggagaggc gcaagcggcc ggcaatcgca ttgacgtttg
     2821 acgatggctg gtgtgacaac gccgctggag ggtttccact tgcgcgcaag cacggcgcgc
     2881 ccatgacggt gtttgttgtg cctgggcgcg caggttcgca gtcaccgttc tggccggagc
     2941 agactgcatc agtgctgggc cggaggctgg gcgagaacat ctctcgcgaa gaatatctgg
     3001 aagaggtgat tgagcggctg aaggcgctgc cccaggcgca acgcgatgcg gagatgcatc
     3061 gcatgtttgg cgcggaggat gcgcacaccg cagcatcagt ggaccgaacg atgacgtggg
     3121 aagagattga gcggatgcac gccgggggag ttacgttcgg gtcgcacacg tgcacgcatg
     3181 aaatccttac gcgtattccg ctggagcggg cggaagaaga gatcacgcac tcgcggcaag
     3241 cgattgagaa gcggctgggc ggagagtgcc gcctgtttgc ctatcctaac ggcaacagtt
     3301 cgcagcaggt gcgcgagatg gtgcagcgcg ccggatacaa gctggccttt gtgaacgact
     3361 ggccggaagt gtggactgcg gccaccgatc cataccaggt accgcgagtg aacgtctgtg
     3421 agtttcacct gatcggcgtg aacgggaagt tctcgccgct catattcgag tacgccgttt
     3481 tgtggtcagc agtaaggaac tgctggatcc accgggtgac gggaacgctg cggcggcttg
     3541 cggcaaagct gcgcgtccca tcacaggaaa gcggcgaact ggaggcagaa agcaagcact
     3601 aaccgcaacc cggagtagta aaccaccgat ggcttcacca gggcttcctt cccgccgcct
     3661 tgcaagcgct cgcgtgctcc ccctcacgcc ggctattccg cgcatgcagg cggattccgc
     3721 caacctcgac tacctgcgca ccaacgccgt gctgctggtg atgttttttc acctgctgat
     3781 cttcttcggc aagacccagg tgggacggtt cagcatccgt cccatgggca tcctgggcgt
     3841 gtttctcttt ttcgtgcaca ccagcctggt gctgatgctc tcactggaaa ggcagcaggc
     3901 caagctcggg aatcgtcggc tgtggtcggc gttcatggtg cggcgcatct tccgcgtgta
     3961 tccactgagt attctggcgg taagcgtcat cttctttgcc cggttgccgc tcggccacct
     4021 ggagcccggc cgcctcatga tcacgcccat gggcatcaag ggtctgctct ccaacctgct
     4081 gctggtgcag aacatcacgg acactggttc agtgctgggg ccgctttgga gcctcccgta
     4141 cgagatgcag atgtacgtct ttctgccggc gctgtttctg ctggcgcgga agctcaagtc
     4201 catccgcggg ctggtgctgc tgtggctggc gacggtctgc gtcgcgctgg tgcatgcgcg
     4261 cttcgggcac atgccggacc tggtgcgcta t
//
LOCUS       DASQYP010000092         2422 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_217026, whole genome shotgun sequence.
ACCESSION   DASQYP010000092 DASQYP010000000
VERSION     DASQYP010000092.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 2422)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2422)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2422
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_217026"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..753
                     /locus_tag="VE783_03060"
     CDS             <1..753
                     /locus_tag="VE783_03060"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013253.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-hydroxy acid oxidase"
                     /protein_id="HYX52402.1"
                     /translation="AAFVLSSFSTESMESVASRAEQPLWLQIYAVTRELTEQMVHRAE
                     AAGVRALCLTVDTPVLGARHREVRTPFKLPPDFSLPNVNIGAVSHRPPRGAIYSELLN
                     PALTWKDVEWLRSITKIPVLLKGVLNPEDALKAIDHGADGLIVSNHGARNLDTLPSTA
                     EALPRIADKVQEKIPLLVDGGIRRGTDVLKAIALGASAVLIGRPYLYGLSIAGADGVA
                     RVVEILKTELQMAMALTGKTSVCQVNRSVLWD"
     gene            complement(758..1714)
                     /locus_tag="VE783_03065"
     CDS             complement(758..1714)
                     /locus_tag="VE783_03065"
                     /inference="COORDINATES: protein motif:HMM:NF014912.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ferritin family protein"
                     /protein_id="HYX52403.1"
                     /translation="MRSFESLTGREILALAITLEEEDERIYADYAEELKKEFPATASM
                     FDEMRVEESEHRRRLIELFRSKFGEHIPLIRRTDVKGFVHRRPIWLTKPLRLDTIRKE
                     AATMEVETRRFYERAAARTEDASIRQLLNDLAQDERSHEYRAGELQSEKLSEKAVGEE
                     NEANRKLFVLQIVQPGLAGLMDGSVSTLAPVFAAAFATRSTHTAFAVGLAASIGAGIS
                     MGFAEALSDDGSLTGRGHPWIRGLVCGLMTALGGIGHTIPFLVSNFNVAFTAAVIVVL
                     AELGAIAWIRHRYMDSPWFSATMQVVLGGILVFVAGVLIGSS"
     gene            complement(1772..>2422)
                     /locus_tag="VE783_03070"
     CDS             complement(1772..>2422)
                     /locus_tag="VE783_03070"
                     /EC_number="1.14.13.-"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_function: GO:0050661 - NADP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HYX52404.1"
                     /translation="YKPWEQRMCLVPDADLFEAVRSGRASVVTDQIDTFTERGVRLKS
                     GRELEADIIVTATGLMMQAFGGIDLTVDGQPVNASKVLAYKGVMMSGVPNFASVFGYI
                     NASWTLKADLICNYVCRLLNFMDRKGAKQVTPTPHGEKAVAGFVENFTPNYIQRALAS
                     WPKQGSRKPWRVYQNYFRDTMALKYSRIDDGALVFSSPETVSATREMRGRELAASK"
BASE COUNT          509 a          737 c          663 g          513 t
ORIGIN      
        1 gcggctttcg ttctgagctc attttcaacc gaatccatgg aatctgttgc ctcccgggct
       61 gaacagcctt tgtggctgca gatctatgcc gttacccggg agctgacgga gcagatggtc
      121 catcgcgctg aggccgcggg agttcgcgcg ctgtgcctca cggttgacac gccggttctc
      181 ggtgctcgtc accgcgaagt acggacccca ttcaagcttc cacccgattt cagcttgccc
      241 aacgtgaata ttggagcggt gagccatcgc ccgccgcgcg gcgcaatcta ctccgaactg
      301 ctcaatcccg cactaacctg gaaagatgtt gagtggctgc gctcgattac gaaaatccct
      361 gttctactga agggcgtgct caatcctgaa gatgctctga aggcaattga tcacggcgcg
      421 gatggactga tcgtctccaa ccacggcgca cgcaatcttg atacgctgcc cagcaccgcc
      481 gaagccctgc cgcggatcgc ggacaaagtt caagaaaaga taccgctttt ggtggatggc
      541 ggcattcgtc gtggtacaga tgttttaaag gcgatagcgc ttggcgcaag cgcggtactg
      601 atcggtcgac cttatctata tggtctttcg attgccggag cagacggagt agcccgtgtg
      661 gtggaaatcc tgaagactga attgcagatg gccatggccc ttaccggcaa aacttccgtc
      721 tgccaggtca atcgctccgt gttatgggat tgaaaattta agagctgccg atcagtacgc
      781 ccgccacaaa caccaggata ccgccaagca ccacctgcat ggtcgcggaa aaccagggtg
      841 agtccatgta gcgatgccga atccatgcaa tggcgccaag ctccgccaga accacaatca
      901 ccgcagccgt gaaagccacg ttgaagttgg agaccagaaa cggtatggta tggccgattc
      961 ctcccagggc agtcatcaac ccgcagacca gtccccggat ccacgggtgc ccgcggccgg
     1021 tgaggcttcc atcgtctgag agcgcttcgg caaagcccat actgattccc gcaccgatcg
     1081 aagccgccag tcccacagca aacgctgtat gtgtgctgcg cgtggcgaag gccgcggcaa
     1141 aaaccggcgc cagagtagaa acagacccat ccatcaggcc ggccagcccg ggctgcacga
     1201 tctgaagcac aaacaacttg cggttcgctt cgttctcctc gccaacagct ttttcactca
     1261 gcttttcgct ttgcaattcg ccggcacggt attcgtgcga ccgctcgtcc tgagccagat
     1321 catttaagag ctggcggatg ctggcgtcct cggtcctggc cgctgcccgt tcgtaaaagc
     1381 gccgcgtctc cacttccatg gtcgccgctt ctttgcggat cgtgtccagc ctcagcggtt
     1441 tggtcagcca aatgggacgg cgatgcacaa agcccttaac gtctgtgcgg cgaatgagcg
     1501 gaatgtgttc accaaacttg ctgcggaaaa gctcaatcag ccgccgccgg tgctcagatt
     1561 cctccacgcg catttcgtca aacattgatg cggtagcagg aaactccttc ttcagctctt
     1621 cggcatagtc agcgtagatg cgttcgtctt cctcttccag cgtgatggcg agtgccagga
     1681 tttccctgcc ggtaaggctc tcaaagctgc gcataggtaa ggagaaattg taaacgatgt
     1741 gttacaggaa cagcccgagc aggcctttgc gctacttgct cgcggccagt tccctgccgc
     1801 gcatctccct ggtggcagaa acggtctccg ggctcgagaa caccagcgca ccatcgtcaa
     1861 tgcggctata tttcagcgcc atggtgtcac ggaaataatt ctggtagacg cgccacggct
     1921 tgcgtgagcc ctgcttgggc cagctcgcca gcgcacgctg gatatagttg ggcgtgaagt
     1981 tttccacaaa tccggcgacc gctttttcgc catgcggagt gggtgtgacc tgctttgcgc
     2041 ctttgcgatc cataaagttc agcagccggc aaacgtagtt gcagataagg tcggccttga
     2101 gcgtccacga ggcattgatg tagccgaaca cgctggcaaa gttcggaacg cccgacatca
     2161 tgacgccctt gtaggccagc accttggatg cattcaccgg ctggccatcc accgtcaaat
     2221 caattcctcc aaaggcctgc atcatgagcc ccgtggcggt cacaatgatg tcagcctcca
     2281 gctctctgcc tgatttcagc cggaccccgc gctcggtgaa cgtatcaatc tgatcggtca
     2341 ccacgcttgc ccggccactg cgcactgctt caaacaaatc ggcgtcgggc accaggcaca
     2401 tgcgctgctc ccacggtttg ta
//
LOCUS       DASQYP010000093         7306 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_2881, whole genome shotgun sequence.
ACCESSION   DASQYP010000093 DASQYP010000000
VERSION     DASQYP010000093.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 7306)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7306)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7306
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2881"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..192
                     /gene="sucC"
                     /locus_tag="VE783_03075"
     CDS             <1..192
                     /gene="sucC"
                     /locus_tag="VE783_03075"
                     /EC_number="6.2.1.5"
                     /inference="COORDINATES: protein motif:HMM:NF012758.4"
                     /note="catalyzes the interconversion of succinyl-CoA and
                     succinate; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate--CoA ligase subunit beta"
                     /protein_id="HYX52405.1"
                     /translation="VDTLANGVVEAARATNLKLPLVLRLEGTNVEQGREILKKSGLNF
                     QVAETMKDAAQKVVAAAGR"
     gene            209..1099
                     /gene="sucD"
                     /locus_tag="VE783_03080"
     CDS             209..1099
                     /gene="sucD"
                     /locus_tag="VE783_03080"
                     /EC_number="6.2.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018287377.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="succinate--CoA ligase subunit alpha"
                     /protein_id="HYX52406.1"
                     /translation="MAVLVDKNTRLIVQGITGREGTFHAKGAQDYGTKVVGGVTPGKG
                     GTTHEGWPVFNTVAEAKEKTGANATVIFVPPPFAADAIMEAVDAEMPLIVCITEGIPV
                     IDMVRAYEYLNVKGKSRLIGPNCPGIISPGKCKIGIMPGRIHKEGRVGIVSRSGTLTY
                     EAVFQLTQRGIGQSTAIGIGGDPIIGTSFIDALELFNEDPETEAIIMIGEIGGNAEEN
                     AAAYVKQNVKKPVAAFIAGQTAPPGRRMGHAGAIISGGHGTASEKIKALEAAGIAVAK
                     SPADIAQTLLDRAGMTAQAR"
     gene            1157..1582
                     /gene="ndk"
                     /locus_tag="VE783_03085"
     CDS             1157..1582
                     /gene="ndk"
                     /locus_tag="VE783_03085"
                     /EC_number="2.7.4.6"
                     /inference="COORDINATES: protein motif:HMM:NF001908.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004550 - nucleoside diphosphate kinase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside-diphosphate kinase"
                     /protein_id="HYX52407.1"
                     /translation="METLQRTFSIVKPDAVAKGATGDILRMIQEKGFRIIGMKMLEIT
                     KQQAEGFYAVHASRPFFDSLTRFMSSGPIVVLALEKNNAIADLRKLMGATNPANAEEG
                     TVRKKWADSIERNAIHGSDADDTARFELSYFFAGYELTK"
     gene            complement(1783..2070)
                     /locus_tag="VE783_03090"
     CDS             complement(1783..2070)
                     /locus_tag="VE783_03090"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF015925.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004497 - monooxygenase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="putative quinol monooxygenase"
                     /protein_id="HYX52408.1"
                     /translation="MIVLKVDMVVKPGEEEKCKELIRHLHEHSRKEPGCVQYAGHQSN
                     ENPRHFLFYEVYKDDAALQAHRDSPHFKKYVIDGLDGIMESRSRELYSIVD"
     gene            complement(2067..3407)
                     /locus_tag="VE783_03095"
     CDS             complement(2067..3407)
                     /locus_tag="VE783_03095"
                     /EC_number="6.3.4.4"
                     /inference="COORDINATES: protein motif:HMM:NF002223.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004019 - adenylosuccinate synthase
                     activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0006164 - purine nucleotide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate synthase"
                     /protein_id="HYX52409.1"
                     /translation="MKRGKTAVIVGAQWGDEGKGKIVDVLSHNFSVVARYAGGHNAGH
                     TVIIGGKKFVLQLVPCGVLREGCRAVIGNGVVLDPLAFLKEVGMLRQAGVKVDGNLFV
                     SNRAHVILPYHRMIEMGAENAPGRVKIGTTSRGIGPAYEDKMGRRGLRVADLLDKGLL
                     KTTIENACREKNMIAHALFNSDPLDADSMYREYADAAEKLAPFVADTALLLNQALAKG
                     QSVMFEGAQATMLDIDHGTYPFVTSSSASAGGAVIGTGVPPNAIDTVIGITKAYCTRV
                     GGGPFPTEIQGPLADELRARGNEYGAVTGRPRRCGWVDLPLLRYAQMINGVNWWVVTK
                     LDVLDPLEEIPVCVGYKVNGKKTDSIPALATGFDSVEPLYENLPGWETSTEGVTSFEK
                     LPKKAQAYLQFLEKETGAKIGMISTGPDREQTMFMPEFETEIIAPSGGKIARAK"
     gene            3601..4602
                     /locus_tag="VE783_03100"
     CDS             3601..4602
                     /locus_tag="VE783_03100"
                     /inference="COORDINATES: protein motif:HMM:NF013046.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histone deacetylase"
                     /protein_id="HYX52410.1"
                     /translation="MLPFKLVYTDDYYLPIGAHVFPAEKYRMIKKRLLDDQIAGPDDF
                     VTPQPADDEDILLVHTREYVQKLKTGTLSAMEELQMEVPYSPELVKAFWLAAGGSILA
                     ADLALRSGVAVNIGGGFHHAFPDHGEGFCVIHDVAVAIKRMHHEGKINRAMTVDLDVH
                     NGNGTAAIFPPQRKPGSPLPSAGAIRHDLRRSGSELQLLGASDGELEVFTISLHQAHN
                     YPAYKPPSSIDVHLPDATNDEEYLGWLDQALSSAFRSFEPELLCYIAGADPYKEDQLG
                     GLALTIEGLKQRDELVFKVAKARNVPVMVTFAGGYARHVQDTVTIHCNTIMAAKELY"
     gene            4606..5367
                     /locus_tag="VE783_03105"
     CDS             4606..5367
                     /locus_tag="VE783_03105"
                     /inference="COORDINATES: protein motif:HMM:NF024874.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HYX52411.1"
                     /translation="MQIQLIRHATLLLEYAGMRLLVDPMLSDGGAMAPIQNSPQPRNN
                     PLVPLPCPVEQVLDGVQAVLVTHTHRDHWDDAAIQLVPKDLPLFCQPEDLAKMESTHF
                     VNAAAVHDARHWSKICITRTHAQHGTGEIGKAMAPASGYVLQHEAEPTLYIAGDTIWC
                     HEVQETIRRFHPQVIVVNAGGARFLQGDPITMTPEDVIHVCKAALHAQVIADHMEAIN
                     HCLVTRSELARAAHAAGVKVTIPDDGELIENPAHH"
     gene            complement(5410..5676)
                     /locus_tag="VE783_03110"
     CDS             complement(5410..5676)
                     /locus_tag="VE783_03110"
                     /inference="COORDINATES: protein motif:HMM:NF014229.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UBP-type zinc finger domain-containing protein"
                     /protein_id="HYX52412.1"
                     /translation="MSQECSHLSHPKITKTKTHVCEDCVKTGDSWVHLRLCMECGHVG
                     CCDSSKNKHATKHFHGTKHPVIRSVEPGESWTWCYVDEVMGELA"
     gene            complement(5706..6668)
                     /locus_tag="VE783_03115"
     CDS             complement(5706..6668)
                     /locus_tag="VE783_03115"
                     /inference="COORDINATES: protein motif:HMM:NF039315.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5996 family protein"
                     /protein_id="HYX52413.1"
                     /translation="MDVPRTTAVSDLPECWPALPLTEWQETYATLHLWTQIVGKIRME
                     LTPRVNHWWNVPLYVTPHGLTTSSIAYGARQFEMEFDFIEHHLAIRTSDPQTRTIALA
                     PRTVADFYAEVMSALKQLKIEDAIWNMPVEIADPIPFDQDTVHHSYDREYAGRLLQVL
                     ASVDKVFKVFRGRFLGKSSPVHFFWGSFDLAVTRFSGRPAPPRNDPDPVLRKIMQEAY
                     SHEVISAGWWPGGGDVVKEPAFYCYATPEPQGFAQQRVKPEKAWYEPKLGEYLLKYED
                     VRRSSSPSAMVLDFLQSTYEAGAITGKWDRESLEQKPASNAGAA"
     gene            6823..>7306
                     /locus_tag="VE783_03120"
     CDS             6823..>7306
                     /locus_tag="VE783_03120"
                     /inference="COORDINATES: protein motif:HMM:NF014880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0006614 - SRP-dependent cotranslational
                     protein targeting to membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="signal recognition particle receptor subunit
                     alpha"
                     /protein_id="HYX52414.1"
                     /translation="MFENLQEKLQRAFKNLRGQGTLNEENIQEAMKEIRMALLEADVN
                     FKVVKQFIDQVQAKAVGQEVMTALSPAQQVVKIVHDELVEVLGRDTAKLKFASQPPTV
                     ILMAGLQGSGKTTTSGKLAAWLKKGGHRPMLVSVDVYRPAARQQLKVVADAIKANLYE
                     G"
BASE COUNT         1600 a         2117 c         2109 g         1480 t
ORIGIN      
        1 gtggatacgc tggccaatgg tgtggtggaa gcggcgcgcg ccacaaacct gaagctgcca
       61 ttggtgctgc ggctggaagg aaccaacgtg gagcagggcc gcgagatcct gaaaaaatcc
      121 ggcctgaatt tccaggtagc ggaaaccatg aaggacgctg cgcaaaaagt tgtggctgcc
      181 gcgggaagat aaaagagctg aatagattat ggccgttctc gtagataaaa atactcgact
      241 cattgtccag ggcattaccg gacgcgaagg cacattccac gccaaaggcg cgcaggatta
      301 tggcaccaaa gtcgttggtg gcgtaactcc cggcaagggc ggcaccacgc atgaaggctg
      361 gccggtgttc aacaccgtgg cggaagctaa agaaaagacc ggggccaacg cgacggtcat
      421 ctttgtccct ccgccgttcg ccgcggatgc gatcatggaa gcggttgacg ccgaaatgcc
      481 gctgatcgtc tgcatcaccg aaggcatccc cgtgatcgac atggtccgcg cctacgaata
      541 cctgaacgtc aagggcaagt cgcgcctgat cgggcccaat tgtccgggaa tcatctcgcc
      601 cggaaaatgc aagatcggca tcatgcctgg ccgtatccat aaggaaggcc gcgtgggaat
      661 cgtctcccgc tccggcacgc tgacctatga agccgtgttt cagctgacgc agcgcggcat
      721 cggccagtct acggcaatcg gaatcggcgg agatcccatc attggaacca gcttcattga
      781 cgcgctggaa ctcttcaacg aagatccaga gactgaagcg atcattatga tcggcgagat
      841 tggcgggaac gccgaagaaa acgccgcggc ttatgtgaag cagaacgtga agaagcccgt
      901 agccgcattt atcgccgggc agaccgcgcc tccgggacgc cgcatgggcc acgccggtgc
      961 catcatttcc ggcgggcacg gcactgcgtc agaaaaaatc aaggcgctgg aagctgccgg
     1021 catcgctgtg gccaagtcac cggccgatat cgcacagact ctgctggacc gcgcgggtat
     1081 gaccgctcag gcgcgataag gggctcatta gctcagcaaa gcccatattt gtaactcagg
     1141 agaacgcaac aggaacatgg aaaccttgca acgtactttt tcaatcgtga agcccgatgc
     1201 cgtggccaaa ggcgccaccg gggatatcct tcgcatgatc caggagaagg gcttccgcat
     1261 tatcggcatg aagatgctgg agatcaccaa gcagcaggcc gaaggctttt acgccgtgca
     1321 tgccagccgc ccgttttttg actcgctgac aagattcatg tccagcggcc ctatcgtggt
     1381 gttggcgctc gagaagaaca atgccattgc cgatctccgc aagctgatgg gcgccaccaa
     1441 tcccgccaac gccgaagaag gcaccgtccg caaaaagtgg gcagacagca tcgagcgcaa
     1501 tgctatccac ggctccgatg ccgatgacac ggcccgcttc gagttgagct acttttttgc
     1561 cgggtatgaa ctgacgaaat aaaactgagc gcaaccaatc agcggcgggc atggtcccgc
     1621 cgttttcgat ttcctgattc aatgtgtaag ctgcgcggcg ggcaacgttg ccgctcacgg
     1681 tcatgcatcc gaaaactgcc gcggtaacct tggcggatgg taagacgggc gatcgctggc
     1741 tacttttatg agcagcgttg cccatgcatc gcgcaaattg acttagtcga cgatggaata
     1801 tagctcccgg ctgcgcgatt ccatgatccc atcgagcccg tcgatcacgt acttcttgaa
     1861 gtgaggtgag tcgcgatggg cctggagcgc agcgtcgtct ttatagactt catagaagag
     1921 gaaatgccgc ggattctcat tcgactggtg gcccgcatac tgcacgcaac cgggctcttt
     1981 gcgcgagtgc tcatgaagat ggcgaataag ctctttgcat ttctcttcct cgccgggttt
     2041 cacaaccatg tccaccttga gaacgatcat ttcgccctcg caatcttgcc gccgctgggc
     2101 gctatgattt ccgtttcaaa ctccggcatg aacatggtct gttcgcggtc cggtccggta
     2161 gagatcatgc cgattttcgc gccggtctcc ttctccagaa actggagata ggcctgcgct
     2221 ttctttggca gcttctcaaa gctggtgaca ccctcagtcg aagtctccca accgggcaga
     2281 ttttcgtaga gtggctccac agaatcaaag ccggtggcca gcgcaggaat tgaatccgtc
     2341 ttctttccat tgaccttgta gccgacacaa accggaattt cctcaagtgg atcgagtacg
     2401 tccagcttgg tcaccaccca ccagttcacg ccattgatca tttgggcata acggagcaac
     2461 ggcagatcaa cccaaccgca acgccgaggg cggccggtca cagcgccgta ctcatttccc
     2521 cgcgcgcgaa gttcatccgc cagcgggccc tggatctcgg ttgggaatgg gcctccgccc
     2581 acgcgcgtgc agtacgcctt cgtaatgcca ataacggtgt caatcgcgtt aggcggcaca
     2641 ccggttccaa tcacggcgcc gccggcgctc gcgctggatg aagtcacgaa gggatatgtt
     2701 ccgtgatcga tgtcaagcat cgtggcctga gcgccttcaa acatcacgga ctggcctttt
     2761 gccagcgcct ggttcagaag caacgcggta tcggcgacga acggcgccag cttctcggct
     2821 gcgtcggcgt attcacggta catgctgtcg gcatctagcg gatcagagtt gaacaacgcg
     2881 tgcgcaatca tgtttttctc gcggcaggcg ttctcgatgg tggtcttgag tagtcctttg
     2941 tccagcaggt cagcaacacg aagtccgcgg cggcccatct tgtcttcgta agccgggcca
     3001 atgccgcgcg atgtggtccc gatcttcacc cggccgggcg cgttctccgc tcccatttca
     3061 atcatgcggt ggtacggcaa aataacatgg gcgcgattag agacaaaaag gttcccgtca
     3121 accttcacgc cggcctggcg cagcatgcct acttctttga gaaatgcaag tggatcaagg
     3181 actacgccgt tgccgattac ggcacggcag ccttcgcgca gcacgccgca gggtactagc
     3241 tggagaacga actttttgcc gccgataatg acggtatgtc cggcattgtg gccgcccgca
     3301 taccgtgcca ctaccgaaaa attatgagag agaacgtcaa cgatcttgcc cttgccctcg
     3361 tcgccccact gggcgccgac gattaccgct gtcttaccac gcttcacgcg attgcacact
     3421 cctcgcccgt gatggttttc gcagagttta agaagtttcc gggaaactgg acgggaaagt
     3481 tggtattact gatagatttt agcaaatgcc ggcgcttccc accatgcctg ctatcattgg
     3541 cgcgacgccc tgtgcagcat taacctgagt ggctggccat gcgcccgcaa ggacctgaga
     3601 atgctcccgt tcaaactcgt ctacactgac gattattacc ttcccattgg cgctcacgta
     3661 ttcccggccg aaaaataccg catgatcaag aagcggctac tcgacgatca aattgccgga
     3721 ccggatgact tcgtgacgcc gcagccggcc gacgatgaag atatcctgct ggttcacacc
     3781 cgcgaatacg tccagaaatt gaagaccggc acgctctccg ccatggaaga gctgcagatg
     3841 gaagtgccgt attcgccgga actggtgaag gcgttctggc tggcggcggg tggctcgatc
     3901 cttgcggctg atctggcgct gcgcagcggt gtcgccgtga atatcggcgg aggctttcat
     3961 cacgcctttc ccgatcatgg tgaagggttc tgtgtaatcc acgatgtcgc ggtggcgatc
     4021 aagcgcatgc accacgaagg gaagatcaac cgcgccatga ccgttgacct tgatgtccac
     4081 aacggtaacg gcaccgcggc catatttccg ccacaacgga agccgggcag tccgctgccg
     4141 agcgccggag caatccggca cgacctgcgg cgcagcggaa gtgaattgca gctgctcggc
     4201 gccagcgacg gtgagttgga agtcttcacc atctctctgc atcaagcgca caattacccg
     4261 gcctacaagc cgccgtcttc catcgatgtg catttacccg atgccaccaa cgacgaagaa
     4321 tatctcggct ggctcgatca ggcgttgagt tcggcgtttc ggagttttga gcccgagctg
     4381 ctctgttata ttgccggagc tgatccttat aaagaagacc agttgggcgg gctcgccctg
     4441 acgatcgaag gactgaagca gcgcgacgag ctggtgttca aggttgccaa agcccgcaat
     4501 gtgccggtca tggtgacttt tgcgggcgga tacgcccggc acgtgcagga tacggttact
     4561 atccactgca atacgatcat ggcggcaaaa gaactctact aagacatgca gatccaactc
     4621 atacgccacg ccactctgct ccttgaatac gccggcatgc gcctgctggt ggatcccatg
     4681 ctcagcgatg gcggagccat ggcgccgatc cagaactcgc cgcagccacg gaacaatccg
     4741 cttgtcccgc ttccctgccc cgtggagcag gtgctcgatg gcgtacaagc cgtcctggta
     4801 acgcacacgc atcgtgacca ctgggacgac gccgccattc aacttgtacc caaagacctt
     4861 ccgctcttct gccagccgga agacctggcc aagatggaat caacacattt tgtgaatgcc
     4921 gcagccgttc atgacgcgcg ccactggagc aagatctgca tcacgcgcac acacgctcag
     4981 cacgggacag gagagatcgg caaagccatg gcgccggcga gcggctatgt tcttcagcat
     5041 gaggccgagc cgacgctcta catcgcgggc gacacgatct ggtgccatga agtgcaggag
     5101 acgatccggc gctttcatcc gcaggtgatc gtagtaaatg cgggcggcgc gcggtttctt
     5161 cagggcgatc cgatcaccat gacgcctgag gacgtgatcc atgtctgcaa ggcggccctg
     5221 cacgcgcagg taattgcgga ccacatggag gcgatcaacc actgcctggt cacgcgcagt
     5281 gaactggcgc gagcggcaca tgcggcggga gtgaaggtca ctattccgga tgatggcgag
     5341 ctgatcgaga acccggctca ccactgatct gcactgaaga tactgactaa agcagtagtt
     5401 ggattacgct caggcgagct ctcccatgac ctcatccaca tagcaccagg tccagctctc
     5461 gccgggttca accgaacgaa tcaccggatg tttcgttcca tggaaatgtt tcgtcgcgtg
     5521 cttgttcttc gaggagtcgc agcagcctac atggccgcat tccatgcaca ggcgcaggtg
     5581 gacccagcta tcgccggtct tcacgcaatc ttcgcagaca tgcgttttcg tcttcgtgat
     5641 tttaggatgg ctgagatggc tgcactcttg ggacatggag ctcctttggc gaccgcgtag
     5701 tgactttagg cggctccagc attcgatgcc ggcttctgct ccagcgattc gcggtcccat
     5761 ttgccggtga tggcgccggc ttcataggtg gattgcagga agtctagcac catggcgctg
     5821 ggtgaggatg atcgccgcac gtcttcatac ttcagcaggt actcgcccaa ttttggttca
     5881 taccatgctt tctcgggttt cacgcgttgc tgcgcgaagc cctgaggctc cggcgtggcg
     5941 tagcagtaga acgcaggctc cttcaccacg tctcctccgc cgggccacca gccggcgctg
     6001 atgacctcat gcgagtaggc ctcctgcatg atcttgcgca acacaggatc gggatcattg
     6061 cgcggcgggg cgggccggcc ggagaaacgc gtcacagcca ggtcaaagct gccccagaag
     6121 aaatgtacgg gactcgattt gcccagaaat cgtccgcgga agactttgaa gactttgtcc
     6181 actgaggcga gcacctggag cagccgtccc gcgtattcac gatcatatga atgatgaacg
     6241 gtgtcctgat cgaatggaat cggatccgct atttccaccg gcatattcca aatggcatcc
     6301 tcaatcttca gctgtttgag cgcggacatc acttctgcat agaaatcggc tacagtccgc
     6361 ggcgccaggg caatcgtgcg cgtctgcgga tcgctggtgc ggatggcgag atgatgctcg
     6421 atgaaatcga actccatctc gaattggcgg gcgccgtatg cgatagaaga ggtcgtaagc
     6481 ccatgcggcg tgacgtaaag cggaacgttc caccagtgat tcacacgagg cgtaagttcc
     6541 atgcggatct tacccacgat ctgagtccac aggtgcagtg tggcgtaggt ctcctgccat
     6601 tctgtgagag gcaacgctgg ccagcattcc ggcaggtcag aaacagcggt ggtgcggggt
     6661 acatccatga gaccgctcct cggggtgatt atagtcctgg gtttggaagt acgcggaggc
     6721 ctgaacggta aaacccgggc atcaagccgc tggtacaatg gacgaaagcc gcgcttttcg
     6781 tagccagcat ctaaatccgc gcggaacctt catttcaacc atatgtttga gaatcttcag
     6841 gaaaaattac agcgcgcatt caaaaacctg cgcggccagg gcacgcttaa cgaggaaaac
     6901 atccaggagg ccatgaaaga gatccgcatg gccttgctgg aggcggacgt caacttcaaa
     6961 gtggtcaagc agttcattga ccaggtgcag gccaaggccg tgggccagga agttatgacc
     7021 gcgctctcgc cggcacagca ggtggtgaag atcgtccacg acgaactggt tgaagttctg
     7081 ggcagggaca cagccaagct gaagttcgct tcacagccac cgaccgtgat cctgatggca
     7141 ggccttcagg gttccggtaa gacgaccact tcgggcaagc tggcggcgtg gctcaagaag
     7201 ggtggacatc ggcccatgct ggtctcggta gacgtttatc gtcccgctgc gcgccagcaa
     7261 ttgaaggtgg tggccgatgc gatcaaggcc aacctctatg aaggca
//
LOCUS       DASQYP010000094        12744 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_130316, whole genome shotgun sequence.
ACCESSION   DASQYP010000094 DASQYP010000000
VERSION     DASQYP010000094.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 12744)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12744)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12744
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_130316"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..500)
                     /locus_tag="VE783_03125"
     CDS             complement(<1..500)
                     /locus_tag="VE783_03125"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor"
                     /protein_id="HYX52415.1"
                     /translation="MSLLPDEPAEPGTAIASEAMFVSEARPALEKQFERIVAEYGPAI
                     SRLACSYEAVAGVREELVQDIALAIWQALPHFRGDCSERTFIYRIAHNRGLTHACRRR
                     PGHQSLDDLEPSEEPADPRLEPDEQVARMHQRDQLMSAIQALPMVHRQVIVLTLEGLS
                     PAEIGEV"
     gene            complement(508..1485)
                     /locus_tag="VE783_03130"
     CDS             complement(508..1485)
                     /locus_tag="VE783_03130"
                     /inference="COORDINATES: protein motif:HMM:NF014566.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0071586 - CAAX-box protein processing
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II CAAX endopeptidase family protein"
                     /protein_id="HYX52416.1"
                     /translation="MTFQDQLQSQGAEAASHLRWKQLFVGRDGLRAGWRLSIFFALIG
                     LVLAGQFFLAGARVVNPEHIVITPQLLGANDAIVLLILGAVTWIMGKIERRKFSGYGL
                     PLRKALGKEFWLGSLIGFITISSTLLGLFLLHDFRITGLALHGSAVFTSLAAWAIAFL
                     LVGLFEEFAFRGYTQFTLASGMGFWPAAVVISGLFGLAHLIADPNENATGSAAVVLFG
                     LLLCFFLRRTGNLWCAVGFHAAYDWGQTFFYGVPDSGIAPYHNLLSSRLSGPHWLSGG
                     AVGPEASVVTPIVLLIVALIFNRYYPKDRFPIPRADSMPAAASAQLVGF"
     gene            complement(1674..2300)
                     /locus_tag="VE783_03135"
     CDS             complement(1674..2300)
                     /locus_tag="VE783_03135"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52417.1"
                     /translation="MKAFRQFLKRTPFYGLYKAAGHYPDFWYWKLRGEPIRSPHLVKQ
                     RTVREYADRYGLRILVETGTYYGEMVAAMRSRFDEIYSIEYEHELAARAAHKFARWPH
                     IHILEGDSALKVPEILSKLDRPALFWLDAGYYGWAGLQGDKQRLTTELEAILRDNRFR
                     HIILMDDARGLNGQNGSPTVEQLKQRIDLQFPGHKVEVKHDILRVTPE"
     gene            2354..3244
                     /locus_tag="VE783_03140"
     CDS             2354..3244
                     /locus_tag="VE783_03140"
                     /inference="COORDINATES: protein motif:HMM:TIGR00654.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0016853 - isomerase activity [Evidence
                     IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PhzF family phenazine biosynthesis protein"
                     /protein_id="HYX52418.1"
                     /translation="MSNKKRHCAFTQVDVFTSVPLQGNQLAVFPDATGLTDEQMQAIA
                     RETNLSETTFVFPRDKKIEEKEGIRVRIFTTTEELPFAGHPTLGTAHVLRGNSGAEEV
                     ALALNVGRIPVNFSIHEGEIFGVMTQREPHFGHMHSRDAVARAVGLKRGDIADDIPIQ
                     TVSTANAFAIVPVKSLKVLRSLEPTWTAMHRYLEQSDAKFFYFVSRETENPGVAMQAR
                     MFFYGGEDPATGSAAGPCIAWAVKHGAIGSREQVLLEQGIEMNRRSRIFVSAEREGDK
                     IVNVRVGGHVVEVVRGELFF"
     gene            3494..3907
                     /locus_tag="VE783_03145"
     CDS             3494..3907
                     /locus_tag="VE783_03145"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HYX52419.1"
                     /translation="MRPKKTILCVDDNEQALSIRKVMLETRGYRVIACSNGQDALEAF
                     KKGNVDLVLSDLIMPGIDGAGLVQKIKEISPEVPAILFSGKIRVYEQDTRADVFLPKG
                     MYAPVELLERIRILLIKKRGPKRMMMPQQRMPIAG"
     gene            3979..4680
                     /locus_tag="VE783_03150"
     CDS             3979..4680
                     /locus_tag="VE783_03150"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HYX52420.1"
                     /translation="MAPIIQAENLSKVYRIGKVDVPALDGVSFNVETGEFVSIVGPSG
                     SGKSTLFYILGGLTRATSGRVLIDGQDFATLSDAQRTEMRKHKIGFVFQKFNLLPTLT
                     ARDNIEIAREISGRNGAEPAFFQQVTEMLGVAGRMDHRPSEMSGGEQQRVALARAIIN
                     RPAIILADEPTGNLDSKNSNVVLKMLREANQKFGQTVLMITHNPEAAEIGDRIIHMRD
                     GHIVAAEEDPQWARH"
     gene            4962..5945
                     /gene="thrB"
                     /locus_tag="VE783_03155"
     CDS             4962..5945
                     /gene="thrB"
                     /locus_tag="VE783_03155"
                     /EC_number="2.7.1.39"
                     /inference="COORDINATES: protein motif:HMM:TIGR00191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004413 - homoserine kinase activity
                     [Evidence IEA];
                     GO_process: GO:0009088 - threonine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine kinase"
                     /protein_id="HYX52421.1"
                     /translation="MAKGRFDSGEPYGWRAVVPATSANLGCAFDCGGLALKLYLKVLF
                     APASQGGLTIEYKGVTPDRFPLEASNLILESLRFAASQLQAPEPHGHVNVESDIPIGV
                     GLGSSAAAVIAGLLLGTRYSGGDSNPDEILRWAEKIEGHIDNAAAAYHGGLVLALCNN
                     LDRVVCQRTDFPESIRLVIATPEKVVPTHEARQVLPAAYDRADVLHTLQRNAVLAATC
                     FSGNFDLFPELFDDRLHQPYRQKLVPGMEQCLQLRHKGLLGIAISGSGSSVIAFTTAN
                     EDEIGERLREIFVEEGISATVRSTSADNHGAWVSREPVPFAARRENKIQDV"
     gene            5947..7416
                     /locus_tag="VE783_03160"
     CDS             5947..7416
                     /locus_tag="VE783_03160"
                     /EC_number="2.7.2.4"
                     /inference="COORDINATES: protein motif:HMM:TIGR00657.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004072 - aspartate kinase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate kinase"
                     /protein_id="HYX52422.1"
                     /translation="MKKELVVMKFGGTSVGNAARLRQCAEIVRRGAESHRVIVVVSAM
                     AGITDLIFRTIDAARQGDSAATEASLKKFEVAHRELMLDLFAGERSARALEFAGQIYE
                     QLSRASQALLTLRTEISPQTMDSLVALGERITSWALAEYLNQTGCASAFIKAEEVIVT
                     DANFGNATPEMNETTARCHSVLVPLLDGSAVPVMGGYSGATADGRTTTLGRGGSDYSA
                     TIVGAALRADEVWIWTDVDGVLSADPRICPDATILPDISFAEAIELAYYGAKVIHPKA
                     AYPAQEAGIPVWIKNSFRPEVKGTRITNHAEASNSPVKSVTCVKQATLITLVTRRDIH
                     PAELWGRLFLRLGQEQVEVLFATQSSPEHALGLVLRREDGDRIVKLIASIFRMELAQG
                     VLLPVEVNEEIAVVAVLGESMKGTCGILGRVFSAVARKEVSVIAVAQGASELSICFAV
                     QANSANEVVKSIHEEFCAPANSNIPVCLRPVAASVAGQQ"
     gene            7413..8720
                     /gene="thrC"
                     /locus_tag="VE783_03165"
     CDS             7413..8720
                     /gene="thrC"
                     /locus_tag="VE783_03165"
                     /EC_number="4.2.3.1"
                     /inference="COORDINATES: protein motif:HMM:TIGR00260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004795 - threonine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0009088 - threonine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="threonine synthase"
                     /protein_id="HYX52423.1"
                     /translation="MKTNTTQPVTADHILRCVHCGVVQATADRMFRCQNCSELLEVVY
                     PEWEHAGREFGLRLREIWRERRGGTLPEDASGVWRFRELLPHVESKHVVTMAEGNTPL
                     IQLTQAARETGISRLMAKHQGLNPTGSFKDTGISMAISMARSEGFEFVCCASTGNTSA
                     SVAAYAARAGMQSIVLLPAAQVASGKLAQAIEYGARVLQLNTDFDGCLRVLHEVVRNF
                     PAYLLNSLNPYRLEGQKTVAFEIMEQLDWRVPDHVIVPGGNLANGSALGKGFHELLAL
                     GLIPKLPKISIIQAAGANPLVRTVREKAGKELVRVGAETRATAIRIGNPASWRKAVGV
                     LESTGGQVEDVTEQEIATAKSELGAEGVGCEPASAATLAGLKKLVRSKFVHPEETVVL
                     VLTGHMLKDVDYMLASGVKRVLGPMPADAAAVISTLERIHGER"
     gene            8707..10068
                     /locus_tag="VE783_03170"
     CDS             8707..10068
                     /locus_tag="VE783_03170"
                     /EC_number="1.1.1.3"
                     /inference="COORDINATES: protein motif:HMM:NF004976.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004412 - homoserine dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0006520 - amino acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine dehydrogenase"
                     /protein_id="HYX52424.1"
                     /translation="MASVDAVSVAGSGGVGRRRQVRVGIVGYGTVGRAAAEILTSHTQ
                     EIRERTGGVSLVVTRICRKSPKAAEAGVNGVRVVADWREVVSAEDVDIVIESVGGITT
                     ANEIVRAALEHGKPVVTANKALLARYGEEIFALAKSNNLPVGIEASVAGGVPVIRAIS
                     EALAADRIRSVYGIVNGTCNFILTQMEQKGFEFAEALEQAQAAGYAEADSSLDIDGFD
                     ARDKIAILARIAFGQSVNPSQIPVTGIRQITATDFHYAHRLNSTIRLVASAERTSKGI
                     HLAVQPWLEPRDSMLAKVDGANNAIFIAGEKVGTQMLYGRGAGGNATGTAVLSDVIAI
                     AQQLARGQMAASSMPGFHNPEPVQISPRLQPMSWFLRLAVNDRPGILARVAEVIAREG
                     INIDSVVQEPHMPKDRLSFVITLEPTLESTVQKAVEEINKFDFMRQPVLLLPMISEIE
                     EHV"
     gene            complement(10076..11704)
                     /gene="ggt"
                     /locus_tag="VE783_03175"
     CDS             complement(10076..11704)
                     /gene="ggt"
                     /locus_tag="VE783_03175"
                     /EC_number="2.3.2.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR00066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006750 - glutathione biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamyltransferase"
                     /protein_id="HYX52425.1"
                     /translation="MALDVYCQDRSYGRSMVISDRGIVATSHYLASQAGAQILARGGS
                     AMDAAIAANALLGVTEPMMNGIGGDLFLIYWDAKANKLYGLNASGWAPQKLTPGYLHR
                     EGFREMPHDGIQTVTVPGAVDGWSQAHKRFGKLPWKELFSPAIYYAENGYGVPEIIHD
                     YWMDGAPRMEKTAEARRVFLPGGKPPDVGAKFRNPDVAKALKLIATQGRDAFYKGEIA
                     QAIVTTSAAMGGTMGLNDLAEFSSEWVEPISIQYRGWTVYELPPNVQGMAALEMLNIM
                     SEFQPDAQGPLGTTEIHRRIEAMKLAYADLYRYNADPKFAKIPVEGLLSQKYAAERAS
                     KIDPDIANCNPSPGTPPGSDTTYLAVVDKDGNIASLIQSNYSAFGSGVVVQGMGFALQ
                     NRGALFSLDPAHPNVLAPRKRPFHTIIPGFMERGDVKIGFGIMGGANQPLAHAQFVSN
                     FVDYNMNIQGALEAPRFTIPGQLNCDILIESRVPPETIQALRKKGHNLLVRKEYTSLM
                     GRGQAVLHNTRTGMNFAASDPRADGAAEVEPISF"
     gene            complement(11803..12543)
                     /locus_tag="VE783_03180"
     CDS             complement(11803..12543)
                     /locus_tag="VE783_03180"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52426.1"
                     /translation="MHAQDNYEIQVYSAPTVEPHSTMVEFHTNFTFQGSKATIDGVAP
                     TNHALHETIEITQGFNDWFETGFYIFTSARSGDGWDWVGDHIRPRIAIPVKWKWPVGL
                     SLSNEIGYQRRKFSEDTWTWEMRPIIDKQLGKWYFSFNPTVDRALHGPGTSDGYIFSP
                     NGKVSYDFSKVVTGGLEYYGAIGAFWEFAPFSEQQQQFFPSLDLNVSPKWELNFGIGW
                     GATRSTDHLIVKAIVGRRFNWKQDKATK"
BASE COUNT         2771 a         3467 c         3850 g         2656 t
ORIGIN      
        1 acctcgccaa tttctgcggg cgagagtcct tccagcgtaa gcacaatgac ttggcggtga
       61 accatcggaa gtgcctgaat ggccgacatt agctggtccc gctggtgcat tcgtgccacc
      121 tgctcgtccg gttcgagccg gggatcggcc ggctcctcag aaggctccag gtcatccaga
      181 gactggtgcc cgggccgtcg cctgcaggcg tgagtcaggc cccgattgtg ggcgatgcga
      241 taaatgaagg tgcgctcgga gcagtcgccg cggaagtgag gcagcgcctg ccagatcgcc
      301 agcgcaatgt cctgaaccag ttcttcgcgg acacctgcaa ccgcctcata gctacatgcc
      361 agccgcgaga tagccggacc gtactcggcg acaatgcgct cgaactgctt ttccaaagcg
      421 gggcgcgctt cgctcacaaa cattgcctca ctggcgatgg cggttcctgg ttccgccggc
      481 tcatccggca aaagcgacaa gacaccgtta aaatccgacg agctgagcgg aagccgccgc
      541 cggcatcgaa tctgccctgg gtatcgggaa acgatccttg ggatagtagc ggttgaaaat
      601 caaagccaca atcagcaaca cgatcggtgt tacaacgctt gcttccggac caacggcccc
      661 tcctgagagc cagtgagggc cgctcaatct cgaactgagc aaattgtgat agggtgcgat
      721 gccgctatcg ggaactccat agaagaaagt ttgcccccag tcgtaagcgg catgaaaacc
      781 tacggcgcac cagagattac cagtccttcg gagaaagaag cagagaagga gcccgaaaag
      841 caccaccgca gccgacccgg tcgcgttctc gtttggatcg gcgatcaggt gggcaagacc
      901 gaataatccg gaaatcacga ctgctgccgg ccagaaaccc attcctgaag caagggtaaa
      961 ttgcgtgtaa ccacggaacg cgaattcttc aaacaatccc accagaagga atgcgatcgc
     1021 ccacgcggca agagaggtga aaactgcgct tccgtgaaga gctaagcccg taatccggaa
     1081 atcgtgcaaa agaaacaagc ccaggagcgt gctgctgatc gtaataaagc cgatcagtga
     1141 tcccagccag aactcttttc ccagggcttt ccgcaggggt aagccatacc cgctgaactt
     1201 gcggcgttcg atttttccca tgatccaggt aaccgcgcca agaatgagca ggacgatcgc
     1261 atcattcgcg cccagcagtt gaggggtgat cacaatatgt tcggggttga cgacccgagc
     1321 accggcaagg aaaaattggc cggcaagaac aagcccgatc agtgcgaaaa agatcgataa
     1381 acgccagcct gctcgcaggc cgtcgcggcc gacgaacagt tgtttccacc gcaggtgtga
     1441 agccgcttct gccccttggg actgcagttg atcttgaaat gtcatgttct gtctcctgaa
     1501 tcagaaatcg caccggagga aagcgattag ccgctcttcg ccggtcaatt caggtagtct
     1561 caggtgggct gaaaacctta caaattattt tgcgggactt tgtggcgccg actggtgggg
     1621 tgttcctatt gggtgaatgc tatccctccc gttgtttgcg tggcgatttc ctctcactcc
     1681 ggcgtcactc tcaaaatgtc atgcttcacc tcaaccttat gccctggaaa ctgcaggtca
     1741 atacgttgtt tcagttgttc caccgtaggt gagccgtttt ggccgttgag gccgcgtgcg
     1801 tcatccatca ggatgatgtg ccgaaagcgg ttatcgcgga ggatggcctc cagttctgtc
     1861 gtcagccgtt gcttgtcgcc ttggaggccg gcccagccgt agtagccggc gtcgagccag
     1921 aacagcgcgg ggcggtcgag cttgctcagg atctcgggga ccttgagcgc gctgtcgcct
     1981 tccaggatgt gaatgtgtgg ccagcgcgca aatttgtgtg cagcacgcgc ggccagctcg
     2041 tgctcgtatt cgatggaata aatctcatcg aaacggctgc gcatggctgc caccatttcg
     2101 ccgtagtacg ttccggtttc caccaggatg cgcaagccgt agcggtctgc gtattcgcgc
     2161 acggtacgct gcttcaccag gtgaggagaa cgtatgggct cgccgcgaag cttccagtac
     2221 caaaagtccg gatagtggcc ggcggccttg tagaggccgt aaaaaggcgt gcgcttcaaa
     2281 aattggcgga atgctttcac agggctgtgc gtgttttaca ctgaatgggc agcataaaag
     2341 cggagataaa agcgtgtcaa acaagaaacg tcattgtgcc ttcacccagg tggatgtctt
     2401 cacttctgtg ccgctccagg gaaaccagct cgccgtgttc cctgacgcca ccggccttac
     2461 cgacgagcag atgcaagcca ttgcgcgcga gaccaacctc tctgaaacca ccttcgtgtt
     2521 tcctcgagac aagaagatcg aagaaaaaga aggcatacgc gtgcgcatct tcaccaccac
     2581 cgaagagctg cccttcgccg gccaccctac acttggcact gcccacgtgc tccgcggcaa
     2641 cagtggagct gaggaggttg cgcttgcact gaacgtcggc agaattccgg tgaacttctc
     2701 tatccatgaa ggtgagattt tcggggtgat gacgcagcgc gagccccact tcgggcacat
     2761 gcactcgcgc gatgcggtag cgcgagcagt gggcctgaag cgcggggata ttgccgatga
     2821 tattcccata cagaccgtga gcacggccaa cgcgtttgcc attgtgccgg tgaagtcatt
     2881 gaaagtgctg cgctccctgg agcccacatg gacggcgatg catcgttatc tggagcagag
     2941 tgacgccaag ttcttttatt tcgtttcccg cgagactgaa aatccgggcg tggcaatgca
     3001 ggcgcgaatg tttttctatg gcggagaaga tccggcaacc ggctcggcgg cgggaccgtg
     3061 cattgcctgg gccgtaaaac atggcgcaat cggctcaaga gagcaggtgt tgctggaaca
     3121 gggcattgag atgaatcggc gcagcagaat ttttgtgagt gcggagcgcg agggtgacaa
     3181 gatcgttaac gtgcgcgtgg gcggacacgt ggtggaagtg gtgcgcggag aattattttt
     3241 ctgagccgtc aacactgagc tgccgatttt ctgcgctgtt cagagaaatt ttcacgcgga
     3301 aatttttttc ccacagatat ttttactgtt ggcgtgaagg gtactttaca tggtgagtgc
     3361 ccacgcctat gatgcacgta cgttttcttg cgaacgctga gcaggcgtcg cccagccaac
     3421 aaaaaaaatc tcctctggat ccaccgtaga ccagcagctg cgcttccggg attcagtgat
     3481 attggggcca gtgatgcgac cgaaaaagac cattctgtgt gtagatgaca acgagcaggc
     3541 gctttccatc cgaaaagtga tgctggaaac cagaggctat cgagtgattg cctgctccaa
     3601 cgggcaagat gcgctggagg ccttcaagaa agggaatgtg gaccttgtac taagcgacct
     3661 gatcatgccg ggcattgatg gtgcagggct ggtgcagaaa atcaaggaga tttctcctga
     3721 ggtgccggcc atcctcttct ccggaaagat tcgcgtgtat gaacaggata cgcgcgcaga
     3781 tgtgtttctt cccaagggga tgtatgcgcc ggtggaactg ctggagcgga ttcgcatcct
     3841 gctgatcaag aagcgcggcc ccaagcgtat gatgatgccg cagcagagaa tgcccatagc
     3901 cggctgagct gctgccgtgc tttgtcgtat gttgacggcc acggtttcgt catccgctct
     3961 gttaatatca gagagaccgt ggcccctatc atccaagctg aaaatctatc taaggtctac
     4021 cgcatcggaa aagtggatgt tcctgcgctc gatggcgtga gcttcaacgt tgagacgggc
     4081 gaattcgtca gcatcgtggg cccttccggc agcggaaaat caacgctctt ttacatcctt
     4141 ggcggcttga cgcgggctac ttcagggcgt gtactcatcg atggccagga ttttgcgact
     4201 ctctctgacg cgcagcggac agagatgcgc aagcacaaga tcggcttcgt ctttcagaaa
     4261 ttcaacctgt tgcccacctt gaccgcacgc gacaacattg agatcgcgcg ggaaatctcc
     4321 ggcaggaacg gcgctgagcc ggcgttcttc caacaggtaa cggagatgct gggtgtggcg
     4381 ggaagaatgg accatcgtcc gtcggaaatg tctggcggcg agcaacagcg cgtcgcgctg
     4441 gcgcgggcca tcatcaaccg ccccgccatc atccttgccg atgagccgac gggaaatctg
     4501 gattccaaaa actctaacgt ggtgttgaag atgttgcgcg aggccaacca gaagttcggc
     4561 cagaccgtgc tcatgatcac ccacaaccct gaggcagcgg agataggcga ccgcatcatc
     4621 catatgcgcg acgggcatat tgtggccgcg gaagaggatc cgcaatgggc ccggcattag
     4681 agaccgcgcc attagtgaat ttaatgtctg attacctggg tgcggctcgt taattattga
     4741 cagtccgcag catgcgggct atagtgcaga aatcatgcag gccagccgga atttcgcgat
     4801 gtggaacatg tgcacagcta gaggcacaac aacacacgtg cgaattttcg gcgaggcggt
     4861 caagtagaac aagagcaatt ctaagttcct gacccactcg caaaatcgag tgggttttta
     4921 cttttctggc gttttactcc tggagcaggc ggacgagcgt ggtggccaaa ggcagatttg
     4981 attctggaga gccgtacgga tggcgtgccg tggtaccggc cacctcggcc aacctgggct
     5041 gcgcctttga ttgtggtggg ctggcgctca agctgtatct taaagtgctg tttgccccag
     5101 cgagccaggg tggtctcacg atcgagtata aaggcgtcac gccggaccgt tttcccctgg
     5161 aagcctcgaa cctcattctc gaatctctcc gctttgccgc gagtcaactg caagctcccg
     5221 aaccgcacgg tcacgtgaac gttgaaagcg acatacccat tggcgttggt ctcggtagca
     5281 gcgcagccgc agtgattgcc gggctgctgc tgggcacgcg atattccggc ggcgacagca
     5341 acccggatga gattctgcgc tgggcggaga agatagaggg gcatatcgac aacgcggctg
     5401 ctgcctatca cggcgggctg gttcttgcct tatgcaacaa cttggatcga gtggtgtgcc
     5461 agagaacaga tttcccggaa agcatccggc tggtgattgc aacgccggag aaggtggtgc
     5521 ccactcatga ggcgcgccag gttcttccgg ccgcctacga ccgcgcagat gtgctgcata
     5581 ccctgcaacg caatgccgtt ctggccgcga cctgtttctc cggaaatttc gatctcttcc
     5641 ctgagctctt cgatgatcgt cttcaccagc cgtatcggca gaagctggtg cccggcatgg
     5701 agcaatgcct tcagttgcgc cataaaggtt tgctggggat tgccatcagc ggttcgggat
     5761 catcggtgat cgcattcacc acggctaatg aagatgaaat tggggagagg ttgcgcgaga
     5821 tttttgtgga agaagggatt tcggcaacag tgcgctccac ctcggcagac aatcacggcg
     5881 cgtgggtatc gcgggagccg gtgccgtttg cggcgcggcg cgaaaacaag attcaggatg
     5941 tgtagcatga aaaaagaatt ggttgtaatg aaatttggcg gaacttccgt gggcaatgcg
     6001 gcgcggctgc ggcagtgtgc ggagatcgtc cgtcgcggtg ccgaaagtca tcgggttatc
     6061 gtggttgtct cggccatggc tggcatcacg gacctgatct tccgcacgat tgatgccgcg
     6121 cggcagggag acagcgccgc aaccgaagcc agcctgaaaa agttcgaggt ggcgcaccgt
     6181 gagctcatgc tcgacctttt tgcgggcgag cgctcagcca gggctctgga attcgcgggc
     6241 cagatttatg aacagctcag ccgagcctcg caggcgctgc tcaccttgcg cactgagatt
     6301 tcaccgcaga ccatggattc actcgtcgcg ctgggcgaga gaattacctc atgggcatta
     6361 gccgaatacc tgaaccagac gggctgcgcg agcgctttca tcaaggccga agaggtgatt
     6421 gttactgacg cgaactttgg gaacgcaacc ccggaaatga atgaaaccac cgcgcgttgc
     6481 cacagcgtgc ttgttccgct tctcgatggc agcgcagtgc cggtgatggg cggttacagc
     6541 ggcgccaccg ccgatggccg aaccaccacg ctgggccgcg gcgggtcaga ttattcggca
     6601 actattgttg gcgcagctct gcgcgctgac gaagtgtgga tctggacgga tgtggacgga
     6661 gtgctttccg ccgatccgcg gatttgtccg gatgccacga tcctgccgga catcagcttt
     6721 gctgaggcga ttgaacttgc ctattacggc gccaaggtca ttcatcccaa agcggcgtat
     6781 ccggcgcagg aggcgggaat cccggtttgg atcaagaatt cattccggcc tgaagtcaag
     6841 ggaacgcgga tcaccaatca tgccgaggca agcaattctc cggtgaagtc agtgacctgt
     6901 gtgaagcagg cgacgctcat cacccttgtc acccggcgcg atattcaccc ggcggagctc
     6961 tggggcaggc tcttcctgcg actcggccag gagcaggtgg aggtactttt cgcgacgcaa
     7021 tcatcgcccg agcatgctct gggactggtg ctgcggcgcg aggatggtga ccgcatcgtg
     7081 aagctgatcg cgtctatttt ccgcatggag ctggcgcagg gagtgctgtt gccggtggaa
     7141 gtgaacgaag aaatcgcggt ggtcgcggtg ctgggagaat caatgaaggg gacctgcggc
     7201 atcctggggc gcgtattctc ggcggtggct cgcaaagagg tgagcgttat cgcggtggca
     7261 cagggagcaa gcgaattgag catctgcttt gccgtacaag cgaactcagc caacgaagtc
     7321 gtgaagtcga tccatgaaga gttctgcgcg ccggcaaaca gcaacatccc ggtatgcttg
     7381 cgtcccgtcg cggcgtctgt tgcagggcag caatgaagac gaacacgacc caacccgtta
     7441 ccgccgacca catcctccgg tgcgtgcatt gcggcgtggt ccaggccacg gcagaccgaa
     7501 tgttccgctg ccagaattgc tctgagttgc tggaagttgt ttatccggag tgggagcatg
     7561 caggccgcga gtttggattg cggctgcggg agatctggcg agaacgccgt ggcggcaccc
     7621 ttcctgaaga cgccagcggc gtctggcgct tccgcgaatt gttgccgcac gtagaaagca
     7681 agcacgtggt gaccatggcg gaagggaaca cgcctctcat tcaactgacg caggcggctc
     7741 gtgagaccgg catatcgcgg cttatggcca agcaccaggg attgaacccc acaggatcat
     7801 tcaaagacac cggcatctcc atggcgatca gcatggcgcg gtcagaagga tttgaatttg
     7861 tttgctgcgc ttccaccggc aatacctctg cttccgtggc cgcctacgcc gcgcgcgcgg
     7921 ggatgcaaag catcgttctg ctgcctgcgg cccaggtggc atcaggtaag ctggcgcagg
     7981 ccattgagta cggcgcgcgt gtgttgcagt tgaacactga ttttgatggc tgcctgaggg
     8041 tgctgcacga ggtggtgcgg aactttcccg cgtacctgct gaattcgctg aacccgtatc
     8101 gcctggaagg ccagaaaacc gtggctttcg agatcatgga acagctggac tggcgcgtgc
     8161 ccgatcatgt gatcgtgccg ggtggaaacc tggccaacgg ctcagccctg ggcaagggat
     8221 tccatgagtt gctggcgctg ggcttgattc cgaaattgcc gaagatctcc atcatccagg
     8281 cagcgggtgc aaacccgctg gtgaggactg tgcgtgagaa ggcaggcaaa gagctggtgc
     8341 gggtgggtgc ggagacgcgc gctacggcca tacgcatcgg aaatccggca tcgtggcgga
     8401 aggccgtagg tgtgcttgaa agcacaggtg gccaggtcga agacgttacc gagcaggaga
     8461 ttgcgacagc caagtcagaa ctgggagctg aaggtgtggg ctgcgagcct gcctcggcgg
     8521 cgactttggc cggattgaag aagctggtgc ggtcaaaatt tgtacacccc gaggaaaccg
     8581 tcgtactggt tttgaccgga cacatgctga aggatgtgga ctacatgctg gcatccggtg
     8641 tgaagcgcgt gcttggcccc atgccggccg atgcggccgc ggtaatctca actttggagc
     8701 gaatccatgg cgagcgttga tgcagtttcg gtcgccggca gcggtggcgt tgggcgccgc
     8761 aggcaagtgc gtgttggcat tgttggatat ggaacggtag ggcgtgccgc ggcagagatc
     8821 ctcaccagtc acacgcagga aatccgtgag cgcaccggcg gagtgtcctt ggttgtaacg
     8881 cggatctgcc gcaagtcgcc caaagcggct gaggctgggg tgaacggcgt gcgcgttgtg
     8941 gctgactggc gcgaggtggt gagtgccgag gatgtcgaca ttgtgattga atcagtaggc
     9001 gggatcacca cggcgaatga gatcgtgcgc gccgctcttg agcatggcaa acctgtggtc
     9061 acagcaaata aggcgctgct ggcccgttac ggggaagaga tctttgcgct ggcgaaaagc
     9121 aacaatctgc cagtcggcat agaggcaagc gttgcgggtg gtgttcctgt gatccgcgcc
     9181 atctctgaag cgctcgcggc cgatcgaatc cgctcggttt atgggatcgt gaatggcacg
     9241 tgcaacttta tcctgacgca gatggagcag aaggggttcg aattcgcaga agcgctggag
     9301 caggctcaag ccgcaggtta cgccgaggcc gattccagcc tggatattga cggcttcgat
     9361 gccagagaca agatcgcgat tctggcccgc atcgcgtttg gacagtctgt gaatccgagc
     9421 cagatcccag tcacgggcat ccgccagatc actgcaaccg atttccacta cgcccaccgg
     9481 ctcaattcaa cgatccggct ggtcgcttcg gctgagcgta cgtcaaaagg gattcatctg
     9541 gccgtgcagc cgtggcttga accgcgcgac tccatgctgg ccaaggtgga tggagcgaat
     9601 aatgcaatct tcattgcagg tgaaaaggtc ggcacgcaga tgctctatgg ccgtggcgca
     9661 ggaggaaatg ctactggtac ggcggtactc tctgacgtga tcgcgatcgc gcaacaactg
     9721 gcgcgcgggc aaatggcggc cagttcaatg cccggattcc acaatcctga gccggtgcag
     9781 atctcgccgc ggctgcagcc gatgagttgg tttctgcggc ttgccgtaaa cgatcgtccc
     9841 ggcatcctgg cgcgagtggc ggaagtgatc gcgcgcgagg gcatcaacat tgattccgtg
     9901 gttcaggagc cgcacatgcc caaggaccgg ctctcatttg tgatcacgct ggagcccacg
     9961 ctcgagagca cggttcagaa ggcggtggaa gagatcaaca aatttgactt catgcgacag
    10021 ccggtgcttc tgctgccgat gatctcagaa attgaagagc acgtttaatt cccggctaaa
    10081 agctgatcgg ttcaacctcg gctgcgccgt cagcccgcgg atcggaagcg gcaaagttca
    10141 ttccggttcg ggtattgtgc agcactgcct ggccgcgtcc catcagcgac gtgtattcct
    10201 ttcgcaccag caaattgtgt cccttcttgc ggagtgcctg aatggtttcg ggtggtacgc
    10261 gggactcaat cagaatgtcg caattgagct gccctggaat agtgaagcgt ggtgcttcca
    10321 gcgcgccctg gatattcatg ttgtagtcca cgaagttgga aacaaactgc gcatgcgcga
    10381 gcggctggtt tgcaccaccc atgatgccga aaccaatctt tacgtcaccg cgctccatga
    10441 aaccagggat gatggtgtga aaaggccgct tgcgaggcgc cagaacattg gggtgagcgg
    10501 gatccaggct aaaaagcgcg cccctatttt gcagcgcgaa tcccataccc tgaaccacca
    10561 cgccggagcc aaatgcggag tagttactct ggatgagaga agcaatgttg ccatctttat
    10621 ccacgacggc cagataagtt gtatcgctgc cgggaggagt gcccggcgaa ggattgcagt
    10681 ttgcgatgtc aggatcgatc ttcgatgcac gctctgccgc gtacttttgt gaaagcaaac
    10741 cttccaccgg gatcttcgcg aatttcggat cagcgttata gcggtaaaga tcggcatacg
    10801 ccaacttcat ggcctcaatt cggcgatgga tctcggttgt gcccagcggg ccctgagcat
    10861 cgggctgaaa ctcgctcatg atgttgagca tttccagagc agccatcccc tgaacattcg
    10921 gaggtaattc atacacggtc cagccacggt attgaatgga gatcggctca acccactcgg
    10981 acgaaaactc cgccaggtca ttaaggccca tggtgccgcc catcgcggct gaagtcgtca
    11041 caatggcttg cgcaatctca cctttgtaga acgcgtcgcg tccctgggtt gcgatcagct
    11101 ttaacgcctt ggctacatct ggattcctga actttgctcc cacgtcagga ggtttgccgc
    11161 caggcaggaa gacgcgccgc gcttccgcgg tcttttccat ccgaggagct ccatccatcc
    11221 aataatcatg gatgatctcc ggcacaccat agccattctc ggcatagtaa atggcaggac
    11281 tgaagagttc cttccatggc aacttgccaa atcgcttatg cgcctggctc cagccatcca
    11341 cggcccccgg cacggtcacg gtttggattc catcgtgcgg catttcgcgg aagccttcgc
    11401 ggtggagata accaggagta agcttttgcg gagcccatcc actggcgttc aagccgtaaa
    11461 gcttgttggc cttagcgtcc cagtagatca ggaagaggtc tccgccgatt ccattcatca
    11521 tgggttccgt gaccccgaga agcgcgttcg cagcgatggc cgcgtccatg gctgagccgc
    11581 cgcgcgccag tatctgagct ccggcctggg acgccagata gtggctggtc gcgacgatgc
    11641 cgcggtcgct gatgaccatg gaccgtccgt acgaacgatc ctgacaataa acatcgagtg
    11701 ccatagcgaa tatgcaggct aaagtgacaa gcatcggacg aagcagcatc tggacctcgc
    11761 aggagctgat taaaccgaga gattatagaa gatgccagag cttcactttg tggccttatc
    11821 ctgcttccag ttaaagcgcc gtcccacgat agctttcaca atcaggtggt ctgtgctgcg
    11881 ggtagcgccc cagccaatgc caaagttcaa ctcccacttt ggcgagacat tgaggtccag
    11941 cgaggggaag aactgctgtt gctgttcaga aaatggcgca aattcccaaa acgccccaat
    12001 tgcaccgtag tactccagac cgcccgtcac cactttgctg aagtcatagg ataccttccc
    12061 attcggcgag aagatgtaac catcgctcgt acccgggcca tgaagagctc ggtccacagt
    12121 cgggttgaaa gagaaatacc acttgcccag ctgcttatcg atgatcgggc gcatctccca
    12181 tgtccaggtg tcttcagaga acttgcggcg ctgatagcca atttcattgg ataggctgag
    12241 ccctacgggc cacttccact ttacgggaat ggcgatgcga ggccgaatgt ggtcgcccac
    12301 ccagtcccag ccatctcctg agcgggcgct ggtaaagata taaaagccgg tctcaaacca
    12361 atcattgaaa ccctgggtga tttcaatggt ttcatgcagg gcatggttgg tgggagccac
    12421 accgtcaatg gtcgctttgc tgccctgaaa ggtaaagttg gtatgaaatt ccaccatggt
    12481 ggagtgaggt tcaaccgtgg gggcgctgta cacctggatt tcgtaattat cctgtgcgtg
    12541 catgcagaag cagcccaaga gtgagaatga aaggaagaga caatgccgga tcatcgtgta
    12601 ccaattgaag catacaggtg ggaatcggcg gaagaccgac ccagagcaat tgagctaaat
    12661 gaagaaggcc gcggattcgc ggcccttgat cccttatcct tacctttgta cggctatgct
    12721 gctttcattg ctcgtttacg ttcc
//
LOCUS       DASQYP010000095         4645 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_300835, whole genome shotgun sequence.
ACCESSION   DASQYP010000095 DASQYP010000000
VERSION     DASQYP010000095.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 4645)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4645)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4645
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_300835"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1884
                     /gene="shc"
                     /locus_tag="VE783_03185"
     CDS             <1..1884
                     /gene="shc"
                     /locus_tag="VE783_03185"
                     /EC_number="5.4.99.17"
                     /inference="COORDINATES: protein motif:HMM:TIGR01787.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051007 - squalene-hopene cyclase activity
                     [Evidence IEA];
                     GO_process: GO:0019746 - hopanoid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="squalene--hopene cyclase"
                     /protein_id="HYX52427.1"
                     /translation="EDGYWCGELEADTTLESDYIAIHTLLGTGNKQRMERAVPEIIRH
                     QNEDGGWPIYGGGPSNISASVKAYFALKLMGMSPDDPVLERARTRILQMGGVTECNTF
                     TKIYLCFLGQYDWEAVPAVPPEIVLFPKWFWFNIYEISSWSRAILVPLSICYAKKPFK
                     KIPAEMGIDELFVGGRHGRHLHLRWTEKLVTWRNFFLVLNSLIHFCERFHIRPLRKVA
                     LREAEDWMLARFEKSDGLGAIYPGILNSIIALKCLGYSNDDPQVIRALDEFEKLGIDE
                     PGIADHSEPTFRMQPCMSPVWDTAYAMFALGEAGVSRKDPRMLKAADWILSKEVRNKG
                     DWSVKVPNTQPGGWYFEFNNEFYPDVDDSAMVLLGLDKVENPRERYQHDISKRAIEWI
                     FAMQCKSGGWASFDKDNTRMVFQHIPFADHNAMLDPPTVDITGRVLEMLAAYGYTKDD
                     ARVKKAIRFLISEQEPDGSWFGRWGVNYIYGTMLVLRGLQAMGVDHHEPYVQQGAEWL
                     RMVQNADGGWGETCGSYDDPTTRGIGLSTPSQTAWAIMGLLAAGDTRSESVQRGVMYL
                     LETQRADGSWDEDQYTGTGFPRVFYLAYHLYRDYFPLIALANFQREFTELEREGSVGY
                     ARG"
     gene            1998..3125
                     /gene="hpnH"
                     /locus_tag="VE783_03190"
     CDS             1998..3125
                     /gene="hpnH"
                     /locus_tag="VE783_03190"
                     /inference="COORDINATES: protein motif:HMM:TIGR03470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenosyl-hopene transferase HpnH"
                     /protein_id="HYX52428.1"
                     /translation="MPVPISQMWTVASYVVKQKLARRERYPLVLMLEPLFRCNLACAG
                     CGKIQYPAHILKKELTPEECFKAVDECGAPMVSIPGGEPLMHSQIDKIVEGLVTRKKY
                     IYLCTNALLLKEKLDLFKPSKYLTFSVHVDGEREHHDFSVCREGGYELAIEGMREALK
                     RGFRVTTNTTLFDGADPNSVRAHFDQMMELGVEGMMLSPGYSYDKAPDQKHFLGKART
                     KRLFRAILSNRKKSWQFNQSPLFLEYLMGKRHYACTPWGMPTYNIFGWQKPCYLLQDG
                     YTDTFQELIDSTAWQEYGTESGNPRCANCMVHSGYEASAVNDTFSSLGGLVATIRAMI
                     FNAHEDDAAARLLNEPVRPVHSYNPLVQIQETSSELEETRA"
     gene            3122..3544
                     /locus_tag="VE783_03195"
     CDS             3122..3544
                     /locus_tag="VE783_03195"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52429.1"
                     /translation="MSNEPANGAQFEQLEVVPGFEKQRLEGWIPELASDEELRQALEK
                     AFDYRGDVTITRKDGSKVEGYIFDRRSGKTLSDSLVRLYPRDSNQKVAIPYSDIAALA
                     FSDRDPAAGKSWEAWVRKYWEKKAAGEKNIGIEAEKLE"
     gene            3819..>4645
                     /gene="hpnA"
                     /locus_tag="VE783_03200"
     CDS             3819..>4645
                     /gene="hpnA"
                     /locus_tag="VE783_03200"
                     /inference="COORDINATES: protein motif:HMM:TIGR03466.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hopanoid-associated sugar epimerase"
                     /protein_id="HYX52430.1"
                     /translation="MKAFVTGATGFVGSHVARLLAEQGADLRLLVRESSRTENIAGLK
                     ADLVKGDLRRPESLRSAVQGCEFVFHVAADYRIWVRDPEEMYKANAEGTRAIIDAALA
                     AGARRVIYCSSVATMGFTESGQIVDETTPVSLDDMVGPYKRSKFMAEQIALEAGRRTG
                     KVVVVNPTTPIGEADIKPTPTGRIILDFLKRKFPAYVDTGLNLADIKEVARGHLLAME
                     KARPGERYILGGENLTLKQILDKLAALTGLSSPTTKVPHAVAMGFAAFDQFFTGIVMG
                     "
BASE COUNT         1031 a         1254 c         1447 g          913 t
ORIGIN      
        1 gaagatggct actggtgtgg cgaactcgaa gccgacacca cactggaatc ggactacatt
       61 gccatccaca cgctgctggg gaccggcaac aagcagcgta tggagcgcgc ggtgccggag
      121 atcatccgtc accagaacga agacggcggc tggcctattt atggtggcgg accttcaaac
      181 atcagtgcct cagtaaaggc gtacttcgcc ttgaagctga tgggcatgag cccggatgat
      241 ccggtgctgg agcgcgcgcg cacgcgcatt ttgcagatgg gcggcgttac cgagtgcaac
      301 accttcacca agatatacct gtgcttcctc ggccagtatg actgggaagc cgtgccggcg
      361 gttccgccgg agatcgtgct cttccccaag tggttctggt tcaacatcta cgaaatttcc
      421 tcgtggtcgc gcgccatcct ggtgccgctc tcgatctgct acgccaaaaa gcctttcaag
      481 aagattcccg cggagatggg cattgacgag ctattcgtcg gcggccgcca cggacgtcat
      541 ctgcacctgc gctggacaga aaagctcgtc acgtggcgca atttctttct ggtgttgaac
      601 agcctgatcc atttctgcga gcggttccat atccgtccgc tgcgcaaggt cgcattgcgg
      661 gaagcggagg actggatgct ggcgcggttc gaaaaatctg acgggctggg agcgatttac
      721 cccggcatct tgaactcgat catcgcgctc aagtgcctgg ggtattcaaa tgacgatccg
      781 caggtgattc gcgcgctgga tgaattcgag aaactcggca tcgatgagcc cgggattgca
      841 gatcactccg agccgacctt ccgcatgcag ccctgcatgt cgccggtttg ggacaccgcc
      901 tacgcgatgt ttgcactcgg cgaagccggc gtgtcgcgca aagatccgcg catgctgaaa
      961 gctgccgact ggatcctaag caaggaagtc cgcaacaaag gcgactggtc agtgaaggtc
     1021 ccgaatacac agccgggcgg ctggtacttt gagttcaaca acgagtttta cccggacgtg
     1081 gacgattcgg ccatggtgct gctgggcctc gataaggttg agaacccgcg cgagcgctat
     1141 cagcacgata tctcgaagcg ggcaattgag tggatcttcg ccatgcagtg caaaagcggt
     1201 ggctgggcgt cctttgacaa ggacaatacc cggatggtgt tccagcacat cccgttcgct
     1261 gaccacaatg ccatgcttga tccgcccacc gtggacatca ccgggcgcgt gctggagatg
     1321 cttgcagcgt atggctacac caaagatgac gcccgggtga agaaggcaat caggttcctt
     1381 atcagcgagc aggagccgga cggttcctgg ttcggtcgct ggggcgtcaa ctacatttac
     1441 ggaaccatgc tggtgcttcg cgggctgcaa gcgatgggtg tggaccatca tgaaccgtac
     1501 gtacaacagg gcgcagaatg gctgcgcatg gtgcagaacg ccgacggcgg ctggggcgag
     1561 acttgcggct cctatgatga tcccacgaca cggggcatcg ggctaagcac accttcgcaa
     1621 actgcgtggg caatcatggg cctgctggcg gcgggcgaca cgcgcagtga gtccgtgcag
     1681 cgcggcgtga tgtacctgct ggagacacag agagctgatg gttcgtggga tgaagaccag
     1741 tacacgggaa cgggtttccc gcgggtcttc tacctggcgt accacctgta tcgcgattat
     1801 ttcccgctga tcgcactggc gaacttccag cgcgagttta ctgaactcga gcgagaggga
     1861 agcgtgggct acgcgagggg ctaacgctcc agatcgggtg atctggtgac cggttgatcc
     1921 ggtgatcgga atcgccgaaa tataacggca caggcaggag tgcctgtgcc ccacaagttt
     1981 ttgtaaggag atagattttg ccggtaccca tttcccagat gtggacagtt gcgagttatg
     2041 tggttaagca gaagctcgcg cgtcgtgaac gctatccgct ggtcctcatg ctggagccct
     2101 tgttccgctg caacctggcc tgtgccggat gcggcaagat tcagtaccct gcccacatcc
     2161 tgaagaagga actcacgccg gaagagtgct tcaaggcagt ggacgagtgc ggcgccccca
     2221 tggtgagtat cccgggcggc gagccgctga tgcactcgca gattgacaag atcgtggaag
     2281 ggctcgtaac gcgcaagaag tacatctatc tgtgcaccaa cgcgctgctg ctcaaagaaa
     2341 agctggacct gttcaagcca agcaagtacc tgacgttttc tgtgcacgtg gacggcgagc
     2401 gcgaacacca cgacttctcg gtatgccgcg agggtggata cgagctggcg attgaaggca
     2461 tgagagaagc gctaaagcgc ggtttccgcg tcacgacgaa tacaacgctg ttcgacggcg
     2521 ccgatccgaa cagtgtgcgc gcgcactttg accagatgat ggagctaggc gtggaaggca
     2581 tgatgctttc ccccggctat tcgtacgaca aggcgccgga ccagaagcac ttccttggta
     2641 aggcccgtac aaagcggctg ttccgggcga ttctttccaa ccgcaagaag agctggcagt
     2701 tcaaccagtc gccgttattt cttgagtacc tgatggggaa acggcactac gcctgcactc
     2761 cgtggggtat gcccacctac aacatttttg gctggcagaa gccctgctat ctgctgcagg
     2821 acggctacac ggacaccttc caggagctga ttgactcaac cgcatggcag gagtacggaa
     2881 ctgaatccgg taatcctcgt tgcgccaact gcatggtgca cagcggctat gaggcctcag
     2941 cggtgaatga tactttcagt tcgctgggcg ggctggtggc gacgatccgg gcgatgattt
     3001 tcaatgcgca cgaggatgac gccgccgcgc ggctgctcaa tgaaccggtg cgtccggtgc
     3061 atagctacaa cccgctggtg cagatccagg aaacgtccag cgagcttgag gaaacgcggg
     3121 catgagcaac gagccggcca acggggcaca gttcgagcag cttgaagtgg ttcccggatt
     3181 cgagaagcag aggctggaag ggtggatacc tgagctcgct tcagacgagg agcttagaca
     3241 ggcgctggaa aaagctttcg attatcgcgg cgacgtgacg attacgcgca aggacgggag
     3301 caaggttgag ggttatattt tcgaccgccg ttccggaaag actttgagcg actcgctggt
     3361 gcgcctctat ccgagggatt ccaaccaaaa agtggcgatt ccgtactcgg atattgcggc
     3421 actggcattt tctgatcgtg accccgcggc cggcaagagt tgggaagcct gggtacgtaa
     3481 atattgggag aagaaggcgg cgggtgagaa gaacatcggg attgaggcag agaagctgga
     3541 gtagcagagc tcgacttagc gaaacccaag ttgctccgca cattcgcttc tcccttacgc
     3601 catgcggcgg ggccttctgc ttcgattacg aggctctcat atgacctccg acaaaaagca
     3661 cgcaaagaaa agagcacgcc ctcagaaaac cacgatatca gcggagccta agccaagacg
     3721 ctcgacgtac agcgctgaag tggaggagga actgcggatc ggtcgcgaga tcatgaaaca
     3781 atatcgcgaa gttttcgaag ctctcgccaa aatgtgaaat gaaagcattt gtcacaggag
     3841 ccacaggctt cgtcggcagc cacgttgcgc gccttctggc ggagcaaggg gcggacctgc
     3901 gcctgctggt acgcgagagc agccggacgg agaacattgc tgggctcaaa gcggacctgg
     3961 tgaagggtga tttgcgccgg ccggagtcgc tgcgatctgc cgtccagggc tgtgagttcg
     4021 tgttccacgt ggcggcggat tatcgcatat gggtgcgcga tcctgaggag atgtacaagg
     4081 ccaacgccga aggaacgcgc gccattatcg atgcagctct ggccgcgggt gcgcggcgcg
     4141 tgatttattg cagttctgtg gctaccatgg gcttcaccga atcggggcag atcgtggatg
     4201 agaccacgcc tgtatcgctg gatgacatgg tggggccata caagagatcg aagttcatgg
     4261 cggagcagat tgcgctggaa gccgggcggc gaacaggaaa agttgtggtg gtgaatccga
     4321 ccacaccaat cggtgaagca gatatcaaac cgacgcccac aggccgcatt atcctcgatt
     4381 ttctgaaacg caagttcccc gcctacgtgg ataccgggtt aaacctggct gacataaaag
     4441 aagtggcgcg cgggcatctt ctggcaatgg agaaagccag accgggcgag cgctacattc
     4501 ttggcggcga gaacctgacg ttgaagcaga ttctcgacaa gcttgccgcg ctcacaggcc
     4561 tttcatcgcc aactacgaaa gtcccacatg ctgtggcgat gggctttgcc gccttcgacc
     4621 aattcttcac cggaatcgta atggg
//
LOCUS       DASQYP010000096         4133 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_236151, whole genome shotgun sequence.
ACCESSION   DASQYP010000096 DASQYP010000000
VERSION     DASQYP010000096.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 4133)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4133)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4133
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_236151"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            485..763
                     /locus_tag="VE783_03205"
     CDS             485..763
                     /locus_tag="VE783_03205"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52431.1"
                     /translation="MDWKKALIYGSFAAGGVLFLTGRRPAGLAVAGIGLATLASENPE
                     RFEELWRRMPEYVEKGTKFVDMAATFLERIGEHQGGFRNIPVAGGSRY"
     gene            1091..1684
                     /locus_tag="VE783_03210"
     CDS             1091..1684
                     /locus_tag="VE783_03210"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52432.1"
                     /translation="MKRLIAILCFLAVPLMIVRAADRDPHIQEKGSGIIISQSCFAHG
                     YRHGYEEGFHYGNLDVNMARPQRTRWRQFRELRSHYSNEFGSRTSFDAGFKAGAIAGY
                     VDGYRGNGFRAIEELSRLGAEKSAPSVDFDSGIAAGYQAGLAQTPTKEEAKAPCSTPE
                     DRKHAEPFCDGYQRGLVLGKSDRVALSGSAAVLEASR"
     gene            1901..2596
                     /locus_tag="VE783_03215"
     CDS             1901..2596
                     /locus_tag="VE783_03215"
                     /inference="COORDINATES: protein motif:HMM:NF012422.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HYX52433.1"
                     /translation="MTAEALAAEGELMKVATSKKTTIHIAVVESDPLRFIGLKSLFDT
                     EQDLELISSSLAELGPRRDIDLVLLGARAGQNLFDVMAGLKAARPDLRIIVTGSGADD
                     ETILKALAAGAKGYVDEAASPAEFIQAMRIVHQGSVWAPRRVLSIFIERVTSSPGRIF
                     PAGRVTFTEREKEVLELLVAGRSNKEIGSVLGIEERTVKAHVAKLMRKVGVQNRIALS
                     VHAITHSLVTSSK"
     gene            2944..3786
                     /locus_tag="VE783_03220"
     CDS             2944..3786
                     /locus_tag="VE783_03220"
                     /inference="COORDINATES: protein motif:HMM:NF016269.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YSC84-related protein"
                     /protein_id="HYX52434.1"
                     /translation="MKRVLCAVLCVLATSAVCFAETAAGRIDSAATVLNEIMATPDKG
                     IPVEILTSAKCVAVVPSLLKGGFVVGGAHGRGYATCRTGQGWSAPAPFTMTGGSLGFQ
                     IGGQAVDLIMMIMNDRGMQALLSSKFKIGADASAAAGPVGRHVEGSTDWKMRAEVLTY
                     SRARGLFAGVTINGNVIHQDEDATRELYGRMVEFKSILTGSVPSPAAGEPFVAAVQKA
                     VAGANNASTTPKSNVPVNPPASNPAPASPNASSAPATSNTPEPTAPANAATPAAPAPT
                     PRLR"
     gene            complement(3865..>4133)
                     /locus_tag="VE783_03225"
     CDS             complement(3865..>4133)
                     /locus_tag="VE783_03225"
                     /inference="COORDINATES: protein motif:HMM:NF012264.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HYX52435.1"
                     /translation="YSDGQLKWIIENGISPSGMPGWKGILTDDEMWNMVRFMRHLPAK
                     GSLGTPEVFKEEAEEHEAAEHDHGAASGQAGHNESKPHTHTHPH"
BASE COUNT          895 a         1127 c         1178 g          933 t
ORIGIN      
        1 tcgtgagtca gtagctgtga tgtcttaaat cgctttatct cctctcctta ttgtttctcg
       61 cccttcggac aagggaaatc cgaagggctt tttctttcga cattcggaaa tccttctgta
      121 atggactgat aagacagccg aaagactaag agacttaaga gaaaaatggg gtgaaatgca
      181 tcgccaactg tttaattatg ttaattttac ccgcttcagc aactttttcg aaacaaagtc
      241 gtctatcgta gtaacaacaa catacgcagt acccccacgt gggcgtcgac cctataccga
      301 cgcccacttt acttttgcgg cacccgattc tagtacgctc cttttttaga tcacgacgag
      361 agtttgcttt ctgctcctcc ggttgccagg gagcgccgtt gccggatgcc ggcgtgtggg
      421 caacaaagcg cacttcgcaa ggctctaata aacgtttggc aattgggatt gtcggagggt
      481 gcaaatggat tggaagaaag cattgattta cggctcgttc gctgcaggcg gggttctttt
      541 cctgacgggg cgcaggccgg cggggctggc agtggcgggt ataggtctgg ccacgcttgc
      601 ctctgagaac ccggagcgtt ttgaagagct gtggcgccgc atgccggagt acgtggagaa
      661 gggaaccaag ttcgtagaca tggctgccac attcctggag aggattggcg aacatcaagg
      721 cggattcagg aacattcctg tcgcaggcgg gagccgctac tagggcaacc atttaatcgt
      781 cgtgaaaaaa atcaaaaccc cggaggctgt ttggccatcc ggggaatttt ttgccctgat
      841 caatcggagt ctttagctct ccggcaccgt ttcccccagg tttttataat tcagcgcctg
      901 agagctgctt tctcttcatg accggttaag gtgagttgag tatcggggtg tttgttcctt
      961 tgccacattc agggaaatgc ttaacgggca gccaatttga ccttagtgct ggaatagaag
     1021 aactgacatc ctgccgaaac cacgaatcat cccaaaaggg gaagaaacgc ctccctgccg
     1081 ggaaggtgaa atgaaacgcc ttatcgcgat tctctgtttc ctggccgtgc cgctgatgat
     1141 cgttcgtgcc gcggaccgcg atccccatat tcaggaaaaa ggctccggga tcattatcag
     1201 ccagtcctgc tttgctcacg gttatcgtca tggctacgaa gaaggattcc actacgggaa
     1261 cctcgacgta aacatggcgc gaccgcagcg gaccagatgg cggcagttta gagaactgcg
     1321 cagccattac tccaacgagt tcggatcgcg aacatcattc gacgccggat ttaaagccgg
     1381 cgcaatcgct ggctatgtgg atggttatcg cggaaacgga ttcagggcaa ttgaagagct
     1441 cagccgtctc ggcgcagaaa agtcagctcc ttctgtggat ttcgatagcg gaatcgcagc
     1501 aggctaccag gctggattag ctcaaacccc cacgaaggaa gaggccaaag ctccgtgttc
     1561 cacaccagag gatcgcaagc acgctgagcc gttctgcgat ggatatcagc gcggtctcgt
     1621 cctggggaaa agcgatcgcg tggcactttc cggctcagcc gcggtgcttg aggcgagccg
     1681 gtaagattct ggttgagttt tacgatttca ttttcccgct gcagcgcaaa aaaaccaagg
     1741 tcccatgctg caagtcgaag ttagtttttc ttgttcctcc ttccgaatcc caattcaggt
     1801 ctcaactgct tggagtttta gtacatgtac ctctctgaga aatgggcagg tgccatggtt
     1861 catgatactt tcaggtatga acctttgatt tttgcgtaaa atgactgcag aagccctggc
     1921 cgcggaagga gagttgatga aggtagccac gtccaagaag acaactattc acatcgctgt
     1981 ggtggaaagc gatcccctgc gattcattgg gctgaaatca ctgttcgaca cggaacagga
     2041 tctcgagctg atttcaagca gcctggcgga gttagggccg cgcagggaca tagatctggt
     2101 gctccttggt gcaagggccg ggcagaacct tttcgacgtg atggctggac taaaggccgc
     2161 ccgccctgac ctgcgcatca ttgtcaccgg cagtggggcg gatgatgaaa ccatcctcaa
     2221 agctctggcc gccggagcca aaggatatgt ggatgaagcc gcatcaccag cggagtttat
     2281 ccaggccatg cgcatcgtac accaggggtc agtgtgggct cctcggcgcg tgctttctat
     2341 tttcattgag cgcgtgacct cctctcccgg caggattttc cccgccgggc gcgtaacgtt
     2401 cacagagcgt gaaaaggaag ttctcgaact gctggtggcc ggccggtcta acaaagagat
     2461 tggctcagtg ctgggcatcg aagagcgcac ggtcaaggca cacgtggcca aactcatgcg
     2521 taaagttggc gttcagaacc ggatagcatt gtccgttcac gcaatcacgc attcgctggt
     2581 gacctcctcc aagtaagccg caatcacaat ttcaacgcaa gagcccggcg cgaactgccg
     2641 ggcttttgtt ttctgttccg caaggttcca ggatcctgac tgtacaaatg gaaggtcccg
     2701 tacgcaatca gggcacgaat aaggacgctg gcctctaagt acatgtactt acatccgtgt
     2761 ccgacagggc caccggttac ttgctgcgaa ttcgggccgg gtagatactc ttctcaccta
     2821 ccacagaacc tgggagacgg gggttggaca cggtcacgag ggtcgccgtt tccaaccctt
     2881 tatacttttc cagcatctct gctttaacgt acccattgtt acaatcagaa tcctgaggaa
     2941 atcatgaaaa gagttctttg tgccgtgctg tgtgtactgg cgacgagcgc agtgtgcttc
     3001 gccgagactg ccgcgggccg gatcgattct gcggccaccg tgctgaatga gatcatggcc
     3061 acccctgaca agggcatccc tgtggagatc ctcacctcgg ccaagtgcgt agccgtggtg
     3121 ccgtcactgt tgaagggcgg gttcgtagtg ggcggagctc acggccgtgg ttacgccacg
     3181 tgccgtaccg ggcagggctg gagcgctccc gcgcctttca ccatgaccgg cggcagtctg
     3241 ggcttccaga tcggcggcca ggcagtggac ctgattatga tgatcatgaa cgaccgtggc
     3301 atgcaggcgc tactgtcgag caaattcaag atcggcgccg atgcgtcggc cgccgccggg
     3361 ccggttggcc gtcacgtgga aggttcaacg gactggaaga tgcgagccga agtgctgact
     3421 tattcgcggg ctcgcgggct ctttgccggg gtcaccatca acgggaacgt gattcaccag
     3481 gacgaagacg ccacgcgcga gctctacggt cgcatggtgg aattcaagag catccttacg
     3541 ggttcagtgc cctcgcccgc tgctggcgag ccgtttgtgg cggcggtgca gaaagcggtg
     3601 gccggagcca acaatgccag caccacgccg aagtcgaatg tcccggtaaa tccgcccgca
     3661 agcaatccgg cgccagcctc acccaatgca agctcagctc ccgcaaccag caacactccg
     3721 gaaccgacag cacccgctaa cgctgccact cccgccgcgc ctgcgccaac gccacggctt
     3781 cgctgaggca tgatttgagc gataagaagg acgggagccg cgacggctcc cgtgtttgct
     3841 ttcaacgaat ctgtttctga ttgtctagtg cggatgggtg tgggtgtggg gcttgctttc
     3901 gttgtggccg gcctgtcctg aggcagcgcc gtggtcgtgt tcggcggctt catgctcttc
     3961 ggcctcttcc ttgaacacct caggcgttcc caagctgcct ttggcaggca agtgacgcat
     4021 aaaacgcacc atgttccaca tctcgtcatc ggtcaggatg cccttccacc cgggcatacc
     4081 ggacggggaa attccgttct cgatgatcca cttaagctgg ccgtcactgt att
//
LOCUS       DASQYP010000097        19531 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_69268, whole genome shotgun sequence.
ACCESSION   DASQYP010000097 DASQYP010000000
VERSION     DASQYP010000097.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 19531)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19531)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19531
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_69268"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..280
                     /locus_tag="VE783_03230"
     CDS             <1..280
                     /locus_tag="VE783_03230"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52436.1"
                     /translation="DAADKNAFQQKLGSEGYPPDLDTLVNGVEVAGGKKLRFLRRIPV
                     DPMTGKQDWGLRSMQDDPTSDSWGGQNVFDVYTKSDQTALNGTKYKDW"
     gene            288..701
                     /locus_tag="VE783_03235"
     CDS             288..701
                     /locus_tag="VE783_03235"
                     /inference="COORDINATES: protein motif:HMM:NF019575.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin-type N-terminal cleavage/methylation
                     domain-containing protein"
                     /protein_id="HYX52437.1"
                     /translation="MKLVLSRSRRRMPGFTLIELIIVIAIIGILAGVAVPIYKLHVIH
                     AHEAALKQDLRTMRDAIDQYVQDKGKAPQALDDLVSAGYMRVIPNDPFTHQNNTWQVV
                     QEDTLQAIDQTQPGISDVHSGSSLTSSEGTAYSSW"
     gene            741..2429
                     /gene="hutU"
                     /locus_tag="VE783_03240"
     CDS             741..2429
                     /gene="hutU"
                     /locus_tag="VE783_03240"
                     /EC_number="4.2.1.49"
                     /inference="COORDINATES: protein motif:HMM:TIGR01228.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016153 - urocanate hydratase activity
                     [Evidence IEA];
                     GO_process: GO:0006548 - histidine catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="urocanate hydratase"
                     /protein_id="HYX52438.1"
                     /translation="MPVETEILASHIPPLKAPRGTEISCKGWPQEAAMRMLMNNLDEE
                     VGERPRDLVVYGGTGKAARNQQCLEAILSSLKALESDETLLVQSGKPVGLFRTHEYAP
                     RVLIANSNLVGHWSNWEKFNELERAGLMMYGQMTAGSWIYIGSQGIIQGTFETFAAAA
                     EKHMGGDLSGKLIVSGGMGGMGGAQPLAATMAGACFLGIDVDAERIKKRLKTGYCDFM
                     VNTLDEALRILKNSIRKKEAISVGLIGNCADVIPELAERGVLPDILTDQTSAHDPLNG
                     YVPNGMTLEQAIELRQRDPKGYLEKSLDAMARHVEGMLRLQKMGSVTFDYGNNIRTFA
                     FQRGVKNAYDFPGFVPAYIRPLFCEGRGPFRWVALSGDPADIAVTDDLVLQMFPQNRI
                     LERWINLARKRIRFQGLPARICWLGYGERAQFGLAMNDLVKKGKLKAPIVIGRDHLDC
                     GSVASPYRETEGMKDGSDAVADWPLLNALLNTASGASWVSIHNGGGVGIGYSLHAGQV
                     TVADGTDAMAKRIERVLTNDPGIGVARHVDAGYQEAEEFAEKKGVKIPMDRVTG"
     gene            2720..3976
                     /gene="hutI"
                     /locus_tag="VE783_03245"
     CDS             2720..3976
                     /gene="hutI"
                     /locus_tag="VE783_03245"
                     /EC_number="3.5.2.7"
                     /inference="COORDINATES: protein motif:HMM:TIGR01224.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050480 - imidazolonepropionase activity
                     [Evidence IEA];
                     GO_process: GO:0006548 - histidine catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="imidazolonepropionase"
                     /protein_id="HYX52439.1"
                     /translation="MLANIGQLLTLRGDSAPRRGSALDDIGLLKDAALLCGGGKIIAL
                     GSQREMLRSTWLKDNRKKVHEVDCQGKVVVPGLIDCHTHPVFSQPRLIDFEKRIAGAG
                     YEQIAQAGGGIRSSVAGVREASRNELAEKVSAALRAMLRHGTSVVEAKSGYGLSVEAE
                     IKSLEAIREAAKFWPGTVKPTLLAAHVVPQEYAGRQGEYVRLVCEEIIPLVARRKLAE
                     YVDVFCERGAFTLQQSAQIMAAARRHGLDTRAHVCQFTPSQLSGLLEHNPASLDHMDC
                     IAEPDFKVLAGSATVAVLLPGANYFLGHKEFPNARRLIEEGVAMALATDYNPGTSPTV
                     SMPFVISLACTHMKMTPAEAIAASTMNAACALRLQSRKGSIEPGKDADLAVFDVPDYR
                     EIAYWFAWNRCAEMVVGGELQDFAAN"
     gene            3982..5409
                     /locus_tag="VE783_03250"
     CDS             3982..5409
                     /locus_tag="VE783_03250"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF021127.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042578 - phosphoric ester hydrolase
                     activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0045227 - capsule polysaccharide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CapA family protein"
                     /protein_id="HYX52440.1"
                     /translation="MQTNQKKGKPAKLGVMIVWALAMILEGVVAAQQPGSTPGHPPAT
                     ANAPGASGAQTQLPATSAGPTPSPRVAPGVQQSPPASPSPTPNGDQGYQLAAPAPSPS
                     ASPTPTPHVLSGTSFELPLLDREIVVTAVGDVMLGTTFPDDNGDMLPPNDGADLLKEV
                     TPLLRRGDVVFGNLEGPLTEGGESLKCKGKPLGRCFAFRVPTRYGAHLKGAGFNVMGL
                     ANNHAMDFGLEGRTSSRQTLDAQGIAHTGELGDVAHFTAKGSRIGVIAFATYPGAYNL
                     LDFESSLESIRQARRDCDILIVTFHGGGEGAARQHVLPGDETFLGEDRGDLRRFAHAA
                     IDAGAQMVIGSGPHVVRAMEIYQGKLIAYSLGNFATYGPFNLSAENGLSLVLEAHLAP
                     DGSFLHGQVYPVKQEKPGGPKLDPTMSVLAILRDLSVEDFPQTAVAVGPRGELWLPGV
                     PVPECSNAPDLLDALIGTRPCGIYP"
     gene            5438..5974
                     /locus_tag="VE783_03255"
     CDS             5438..5974
                     /locus_tag="VE783_03255"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52441.1"
                     /translation="MRTKAVAVLVSVFMLACGATLCGEPAAPLASLEPALQEALERDA
                     VCSEKSPSPGVPVATQAIVAGGRKAGVIASPQDPCHCKRENCSTFVYVKSGERFQLEL
                     ADMFASIRPMKIAKHGLPSLSAKFQLDELREETTIFDWNGQGYEPSLCATVSKRPNQR
                     VPSIVKHQCRTSARTIPR"
     gene            6144..8834
                     /locus_tag="VE783_03260"
     CDS             6144..8834
                     /locus_tag="VE783_03260"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF023266.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004177 - aminopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008237 - metallopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M1 family metallopeptidase"
                     /protein_id="HYX52442.1"
                     /translation="MAALKNTFFILTVLFTTFCLAQRLPDNVAPRHYTLLFAPDLQKA
                     TFSGEETIEVDLAKTASAIILNSAEIEIQQAELIQGQNTQPAKAGFDEAKEQVTLSVP
                     AALEAGPASIHIKFTGKLNSQLRGFYLAHSASRNYAVTQFENTDARRAFPSFDEPAMK
                     AVFDVTIVADQGDTAISNGRIVADTPGPDQGKHTIKFATTPKMSSYLVAMAVGDFVCN
                     EGSADNIPVRVCGTPDKKPLGTAALRYAEEILHYYDQYYGIPYPFGKLDIVGAPDFEA
                     GAMENTAAIFYRESDLFIDDQHASVRSHQNVFEVLAHEMAHQWFGDLVTMKWWDNVWL
                     NEGFATWMELKPSQALHPEWNALVQGVNATNKALVLDSLRNTHPIRAKAETPEEINEM
                     FDPISYEKGAAVLRMLETYVTPDVFRRGVNSYLRKFAYSNATAEDFWQAMTLASGRPV
                     NKVMPTFIDQPGEPLITVKTACTAAAPEPKASRKKSKRSRTRQIAPAKPKLEITLEQT
                     RFLSDPGAKPDNSTWMAPICVKAEGGHPFCQVVSEKQQALPAAGCASWVFVNANASGY
                     YRTHYDAELMKKLSAVAASALSTAERLSLLNDEAALMGAGQESAANYLDLVTSLREDN
                     ERAILEGIGPALAEIHDYYLNQADKAAFAAWVRSTFGPQLEKFGWSPKPGETDDQRAA
                     RALLVQIVGELGEDPAVISEAGKVAKQYVTDPTSVDGSLAHTALRVSAMGNDAGLFEQ
                     FLGALGKPGITPEETNNYAEAISRFTDAKVVTRWLERIVAPETRNQDAAGYLAGELHN
                     VAVQQQVWDWIRQHWPAVESKLTFGSGAAIVGSTGAFCEPAMREQTQRFFAEHKVAST
                     ERALRQSVEEMNRCISTRPKLSGEVAGWLQQRGTSASAAH"
     gene            complement(8831..9280)
                     /locus_tag="VE783_03265"
     CDS             complement(8831..9280)
                     /locus_tag="VE783_03265"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52443.1"
                     /translation="MIKDPFARKMWKAGLGFAGGMLILFLALTAIYFHLRPRCPDKPL
                     SETVSPDKRWIASVLQRRCGEEAPFVTTISIRSGASPLELGFFSGQLQQSPVFTIEQD
                     ALGAGITLQWTGPDQLIINCRNCAPRYIRRQDARSGAVTIDYQLSAR"
     gene            complement(9280..9876)
                     /gene="yihA"
                     /locus_tag="VE783_03270"
     CDS             complement(9280..9876)
                     /gene="yihA"
                     /locus_tag="VE783_03270"
                     /inference="COORDINATES: protein motif:HMM:TIGR03598.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0043022 - ribosome binding [Evidence IEA];
                     GO_process: GO:0042254 - ribosome biogenesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome biogenesis GTP-binding protein
                     YihA/YsxC"
                     /protein_id="HYX52444.1"
                     /translation="MKPPVAKFLTSAAHPDAFPREGPPEFAFLGRSNVGKSSLINSLL
                     DQKIAHVSSTPGRTQTINFIGIFDKPSHPAPDLVMVDLPGYGYAKISRSISAEWPKFI
                     EPYLKHRTVLQLCVVLIDINIPAQPSDQQLIEFLKHSQREFLVIGTKADKLSGNKLRN
                     ALTALKREHGIHELVPYSARTGEGRAQLWREIKSRVPA"
     gene            9961..10476
                     /locus_tag="VE783_03275"
     CDS             9961..10476
                     /locus_tag="VE783_03275"
                     /inference="COORDINATES: protein motif:HMM:NF020123.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TlpA disulfide reductase family protein"
                     /protein_id="HYX52445.1"
                     /translation="MIRAARMFLIVSLLAAFSGLISAKDKGREPAPRFNATANTGEKF
                     NNESLKGKVVLLEFWTTWCGYCEKELPYVERLNEEFEGKGLVVLAVNVGESRKTVKKY
                     LDQHPRKTRIVLTDDTNLAAMFAAKSYPIYVVIDRDGNISGKQDGAGGERALRSLVGD
                     GGLKELADGDD"
     gene            complement(10541..11143)
                     /locus_tag="VE783_03280"
     CDS             complement(10541..11143)
                     /locus_tag="VE783_03280"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52446.1"
                     /translation="MKLKLNIFASSLLLAVAGISAHAQGVVPKDTTIKVRTDTAIPAK
                     PEANATYQGSISTDVTDSSGKVLIPRGSRAQLVAEPTSDGKDTNLDLQSVVVNGQQYM
                     LQAASKESSAPGGIGANKRTGKYVGGGAAIGAVLGALLGGGKGAAIGAIVGGAGGAGA
                     QVYTGKGKELPAETELSFKLAQDLQLQPMSSQNTTGTQHK"
     gene            11355..11705
                     /locus_tag="VE783_03285"
     CDS             11355..11705
                     /locus_tag="VE783_03285"
                     /inference="COORDINATES: protein motif:HMM:TIGR03433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PadR family transcriptional regulator"
                     /protein_id="HYX52447.1"
                     /translation="MTELNKKNDVWQGTMALMVLKTLESMGPLHGYGIARRIEQISGD
                     RLSLNYGSIYPALMRLEQEGSIASEWGVSENNRKAKYYRLTANGRRQLKKETQEWEEA
                     TSIVARFLAAKEEL"
     gene            11702..14341
                     /locus_tag="VE783_03290"
     CDS             11702..14341
                     /locus_tag="VE783_03290"
                     /inference="COORDINATES: protein motif:HMM:TIGR03434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HYX52448.1"
                     /translation="MKQLRRLWGRLRGLRTAEAREHDMRQEFESHMEMHIADNIRGGM
                     SPDEARREAALKFGGMETAKESVREESRLLWLETAWLDLRYAVRGLRLNPGFAAAAIL
                     SLALGIGATIAIFTVADNLLLRSLPYPDPSKLVMIYEKNNRLDVEHNVVAPADYFDWK
                     AQSSSFSAMGGFFDYQVVFGDGKHSEEIDAQAVTGEVLPLLGAKAVRGRVFTPDEDSD
                     KAYVAVISYRLWQSWFGGDESIIGRTVQVNARPFTVVGVLSPDFYFHTRSTGIWLTLG
                     LKNSPELRSKLGRWLLTVARIKPDASLRQARTEMAGIARRIELEHPETNKNWSVNVEP
                     LRESLVGKVRTQLLILLGAVTLLLAVACANVANLLLARYTARTREIAVRGALGATPGR
                     LVRQLLTESIVLAVTGGALGLALACLAVNWIVALAPKELTQSVEVTFDSRIVIFSCAL
                     ALMTSAAFGLAPAVLAMRRDLNHALHEESRTSTGTGHRFRNWLVVGEIACSVALLAGA
                     GLLLRSMIGLENVNPGLDAGDVLTFRVSVPKVRYPTDEKITQFFADAVQRMAQLPGVR
                     SASAVSYLPFNGMAAATDVIIGGRPPAKPGEGIGAVVRTVLPDYFRTMGIPITHGRDF
                     TYADDLTSAPHRFVVNEAFARKNFPREPVLGKQISVYMADQNPMGEIIGVVGDVKEGA
                     LDQEPTPTVYYIHSHLAYSQMVFVLRTQSDPLALAAPARRILQSLDPELPISDLKTMG
                     AVIRLTYARQQFSTVLLAGFSLTALVLAAIGIYGLLAYSVVQRTREIAVRVALGAEPP
                     GIIRMVVGNGVRLAIAGTIVGLGGALIFSGVMKSMLYEISPRDPLAFTAAPAVLFTIA
                     LLASYLPARRAAKVSPMEALRNE"
     gene            complement(14540..16936)
                     /gene="lon"
                     /locus_tag="VE783_03295"
     CDS             complement(14540..16936)
                     /gene="lon"
                     /locus_tag="VE783_03295"
                     /EC_number="3.4.21.53"
                     /inference="COORDINATES: protein motif:HMM:NF008053.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004176 - ATP-dependent peptidase activity
                     [Evidence IEA];
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="endopeptidase La"
                     /protein_id="HYX52449.1"
                     /translation="MTQNKEKFETRRLPMMPIRDVVIFPFMMTPFIVGRESSVRALEE
                     ALASDRKIFLATQHDASVDEPKPHEIYQVGTIANIVQNLKLPDGNIKVLVEGVERGKI
                     LDLKNNEGYFEATVRTVKYSTENTPVLETALQRVHNLFDQYVKLCQSLNLEPVIITGM
                     NDPAKLSDTIAQNLQLSIEEKQELLEIFDPVERLNRIADVLDIEIEKLNMDRTIQTRV
                     KRQMERAQKEYYLNEKIKAIQKELGRGEKSEFDELKKKIESAGMPKDVQEKAITELKK
                     LEAMPPMSAESTVSRNYLDWLLAVPWKKKSKEIRNIEHAEKILNGDHYGLEKIKDRIL
                     EFLAVRQLVKNPKGSILCFVGPPGVGKTSLGMSIAKATGRKFVRLSLGGVRDEAEIRG
                     HRRTYIGALPGQIIQMMKKAGTKNPVFMLDEVDKMASDFRGDPAAALLEVLDPEQNWM
                     FQDHYLDVEYDLSQVFFVATANVLHSIPAALQDRMEVLRLHGYTELEKVEIAKQFLVR
                     KQREATGLTEQQIQFTEDGIKEIIRSYTREAGVRNLEREIGNLCRKVARKVVKDKAYT
                     LTVNAQTVAEFLGVAKFRDTLAHEKSEVGLVTGLAWTEVGGSILSTEVAIVEGKGKLT
                     ITGQLGEVMQESAQAAMSYVRSRAARLGVPKDFYRNVDIHIHVPEGAIPKDGPSAGIT
                     MATAISSALSKIPVRREVAMTGEITLRGKVLPIGGLKEKLLAALRAGITEAIIPKENE
                     KDLAEVPENIRNHMKVHPVENMDQVLKIALEQPLPEVSQEAVQPIPTSTENISRERYL
                     "
     gene            complement(17110..18531)
                     /locus_tag="VE783_03300"
     CDS             complement(17110..18531)
                     /locus_tag="VE783_03300"
                     /EC_number="4.1.99.3"
                     /inference="COORDINATES: protein motif:HMM:NF013071.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="deoxyribodipyrimidine photo-lyase"
                     /protein_id="HYX52450.1"
                     /translation="MSLARLSSHPRVSVLRKGDPDPEGTCVVYWMQRAQRALDNPALE
                     IAVRAANSLGKPCVVFLAPVPHYPSANLRHYRFLQQGIAPIAQRLQDRGIGFVLRRYP
                     DHHLLRFCEEVRPALVIGDENPMREPHRWRALIARQCKLPLWIVDADVIVPSQLLVKE
                     QHAAYTARPIIHRLLPDFLVPVGNTSAKFPWKPPRGLTSLPPDFDITEDWTLDRSVAP
                     SPRFTGGTEEGLKHLKSFLRDRLRGYVKDRNHPELDTTSHLSPYLHFGHLGPHTIALA
                     VQKAEAPKAAKDAFLEQLIVRRELAINFVRFNPDYDNFESGPAWAHKSLAEHAVDERK
                     IYSRSQFENAETHDPLWNAAQIQMTMTGWMHNYMRMYWAKKILEWSKTPAQAYRTAVE
                     MNDKYELDGRDPNGYAGIAWAIVGKHDRPWFDRPIFGQVRYMSFKSTSKKFDSKRYIA
                     QMHALAKGKSSEESQMGLPLSNE"
     gene            complement(18756..>19531)
                     /locus_tag="VE783_03305"
     CDS             complement(18756..>19531)
                     /locus_tag="VE783_03305"
                     /inference="COORDINATES: protein motif:HMM:NF024895.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="outer membrane beta-barrel protein"
                     /protein_id="HYX52451.1"
                     /translation="ASHQVPPRVEPVESNLGWSGRSSQLVIESKGNLMNRIFIVLAAL
                     LLCASSAFAQQDYVGRYDAFAGFSYLASPKLNLAERGVNGQFGINLNRWLALGADYSY
                     FTGHSDLRPQDLKPALQAQLVPILPLLGPNPAIPFDSITYTFTAGPQINFRQLKWVTF
                     FVRPAIGGMHELATLKPANPVQGIVVATLAPGGKQSDLKPFYGVGGGFDLNAGNHFAL
                     RMGVDFVHVNLFDNLLNGGRNSVRISVGPAFKFGKNVVK"
BASE COUNT         4140 a         5222 c         6083 g         4086 t
ORIGIN      
        1 agacgcagcc gacaaaaacg cttttcagca gaagctgggg agtgaaggtt atccaccaga
       61 cctggatacg ctggtgaacg gggtagaagt agccggaggc aagaagctgc gttttctgcg
      121 ccgtatcccg gttgatccca tgaccggcaa gcaggactgg gggttgcgtt cgatgcagga
      181 cgatccgact tcggattcct ggggcgggca gaacgtgttt gatgtttaca ccaagtctga
      241 ccagactgcg ctgaatggga ccaagtacaa ggattggtaa ctggcttatg aaactcgtgc
      301 tttcacgttc gcggcgccgc atgcctggct ttaccctgat cgagctgatc attgtcattg
      361 ctatcatcgg cattctggca ggtgtagcgg tgccgattta taaattgcat gtgattcatg
      421 cgcacgaggc tgcgctcaag caggacctgc gcaccatgcg cgacgcgatt gaccagtatg
      481 tgcaggacaa aggcaaagcg cctcaggccc tggatgatct tgtctctgcg ggttacatgc
      541 gcgtgattcc gaatgatcct ttcacgcacc agaacaatac gtggcaggtg gtgcaggaag
      601 acacgctgca ggcgattgac cagacccagc cgggaatcag cgacgtgcat agcggctcga
      661 gccttacgag cagcgaaggt acggcttaca gtagctggta acctcactcg cgcgctttcc
      721 ggttctgcta ccatttcctc atgcccgttg agacggaaat ccttgcctcg catatcccac
      781 ctctgaaagc tcctcgtggt acagaaatca gctgcaaagg ctggccacaa gaggcggcca
      841 tgcgcatgct catgaacaac ctcgacgaag aggtcggcga gcggccgcgc gatctggtgg
      901 tctatggcgg tacagggaag gctgcgcgca accagcaatg cctggaggca attctgagct
      961 cgctgaaggc gctggagagt gatgagacgc tgctggtaca gtcgggcaag cccgtcggct
     1021 tattccgtac gcacgaatac gcgcctcggg tgctgatcgc caactccaac ctggttggcc
     1081 attggtccaa ctgggagaag ttcaacgaac tcgaacgggc cggattgatg atgtacggcc
     1141 agatgactgc gggttcgtgg atctacatcg gctcgcaggg gatcattcag ggaacatttg
     1201 agacgtttgc tgccgcggcg gaaaagcata tgggcggcga tctctcaggc aagctgatcg
     1261 tgagtggcgg tatgggaggc atgggtggcg ctcagcccct ggcagcgacg atggcgggcg
     1321 cgtgcttcct cgggatagac gtggatgctg agcgcatcaa gaagcgcttg aagaccggct
     1381 actgcgactt tatggtcaac acgctggacg aggcgctgcg gattttgaaa aattcgattc
     1441 gcaagaaaga ggcgatctct gtcgggctga ttggcaactg cgctgatgtg attcccgaac
     1501 tggccgagcg cggagttctg ccggacatcc tcacggatca gacctcggcg cacgatccgc
     1561 tcaacggata cgtgccgaac ggaatgacgc tggagcaggc gatcgagttg cggcagcgcg
     1621 atccaaaggg gtatctcgag aaatctctgg atgcaatggc ccgccatgtg gaaggtatgt
     1681 tacggctgca aaaaatgggc agtgtaacct ttgattatgg taataacatc cgcacgtttg
     1741 cctttcagcg tggagtaaag aacgcctacg attttcccgg cttcgttccg gcttacattc
     1801 ggccactctt ctgtgaaggt cgaggaccgt tccggtgggt ggcgctttcg ggcgatccag
     1861 ccgatatcgc ggtaacagac gacctggtgc tgcaaatgtt tccgcagaat cggattctgg
     1921 agcgttggat caacctggcg cgcaagcgga tcaggttcca gggtctgcct gcacgcattt
     1981 gctggctggg ctatggcgag cgcgcgcagt tcgggttggc aatgaacgat ctggtgaaga
     2041 agggcaagct gaaagccccg attgtgatcg ggcgcgatca tctggattgc ggctcggtgg
     2101 cttcaccgta ccgtgagacc gaaggcatga aagacggctc agatgccgtc gccgattggc
     2161 cattgttgaa cgcgctgctg aatacggcga gcggcgccag ttgggtgtca atccacaatg
     2221 gcggcggcgt gggtattgga tattcactgc acgccgggca ggtgaccgta gctgacggaa
     2281 cagatgccat ggcgaagcgc attgagcgcg tgctgacgaa tgatccggga atcggcgtcg
     2341 caaggcacgt ggatgcggga tatcaagagg cggaagagtt cgcggagaag aagggcgtga
     2401 aaatacccat ggatcgagtg actgggtgat ccgaactgcc ggagtctcag actattagcg
     2461 tctctttctg tttctctcgg catatccagc atcgccattc gagaggaaaa tccgatcgat
     2521 attcattggt ccgatacctc gggacggtgt ggaagggaga gctacgcgcg gtccttctgt
     2581 ccgaaaccgc aaaagctttg tctgtttctg aacgatctat atggactata cagatataaa
     2641 agcaaggaac cttgcatgga gctgctgcag gtagcgttaa caatttattt tgcctaaagc
     2701 tcgaagaacg ccttacttgt tgctggccaa tatcggccag cttctcaccc tgcgcggaga
     2761 ttccgctccg cggcgtggca gcgcgctgga tgatattggt ctgctcaaag atgcggcttt
     2821 gctctgcggg ggaggcaaga tcattgccct ggggtcgcaa cgcgagatgc tgcgcagtac
     2881 gtggctgaaa gataaccgca aaaaagtaca tgaagtcgac tgtcagggca aagtggtagt
     2941 tcccgggctg atcgattgcc acacgcaccc tgtgttcagc cagccaaggc ttatcgattt
     3001 tgagaagcgc atcgccggag ctggctacga gcagattgcg caggcaggcg gcggcatacg
     3061 gtcgagtgta gccggagtgc gcgaggccag ccgtaatgaa ttggcagaga aggtgagcgc
     3121 tgcgcttcgc gcgatgctgc gtcatggcac cagtgtggtg gaggccaagt caggatatgg
     3181 cctgagcgtg gaggcagaaa tcaagtcgct ggaggcgatt cgcgaagccg cgaaattctg
     3241 gccgggaacc gtgaaaccaa ctttgctggc cgcgcacgtg gtcccgcagg aatatgcggg
     3301 caggcagggc gagtacgtga ggctggtctg cgaggagatc atcccgctgg tggcacgccg
     3361 caagctggcg gagtatgtag atgtgttctg cgagcgtgga gcatttacgc tgcaacaatc
     3421 agcgcagatt atggcggcag cacggcggca tgggttggac acccgcgctc acgtttgcca
     3481 gttcacgcca tcgcagctca gcgggctctt ggagcacaat cctgcttcgc tcgatcacat
     3541 ggattgcatc gccgagccgg atttcaaagt gcttgccggg agcgcaaccg tggcggtgct
     3601 acttccgggc gcgaattact ttctgggcca caaggaattt cccaatgcgc gccgactgat
     3661 tgaggaaggc gtcgcgatgg cgctggcaac ggattacaac ccgggaactt ctcccaccgt
     3721 cagtatgcct tttgtgattt cactggcatg cacgcacatg aagatgactc ctgccgaagc
     3781 aatcgccgct tccacgatga acgccgcatg tgctctgcgg ctgcaaagtc gaaaaggcag
     3841 tattgagccg ggaaaagacg ctgatctggc agtttttgat gtgccggatt atagggagat
     3901 tgcctactgg ttcgcgtgga accgctgtgc tgaaatggta gtgggcgggg aactgcagga
     3961 ttttgccgcc aattaacgca aatgcagacg aaccagaaaa agggcaagcc agccaaactc
     4021 ggagtgatga ttgtttgggc gctggcgatg atattagagg gcgtggttgc tgcgcagcag
     4081 cctggctcga ctcccggcca ccctccggct acggcgaatg cacccggcgc gagcggagct
     4141 cagacgcaat tgcccgctac gtcagccggc ccaacgcctt cgcccagggt agcgcctggt
     4201 gtgcagcagt caccgccggc atccccttct cctacaccaa atggagatca ggggtatcag
     4261 cttgcagctc ccgctccgtc gccttcggcc agcccaaccc cgacaccgca tgtgctctct
     4321 ggaaccagct tcgagctgcc tctgcttgac cgcgaaattg ttgtcacggc ggtaggtgac
     4381 gtgatgctgg gcaccacttt tcctgatgat aacggcgaca tgctgccgcc caatgatggc
     4441 gcagacctgt tgaaagaagt cacgccgctg ctgcggcgag gcgatgtcgt ttttggcaat
     4501 ctcgaagggc cgctgacgga aggcggcgag tcgctgaaat gcaaagggaa gccgctggga
     4561 cgctgctttg cgtttcgcgt acccacgcga tacggagccc acctgaaggg ggcgggcttc
     4621 aatgtgatgg gcctggccaa caatcatgcg atggatttcg gccttgaagg gcgaacgagt
     4681 tcgcggcaga cactggatgc gcagggaatt gctcacacgg gagagttggg agacgttgcg
     4741 catttcactg cgaaggggag ccgcattggc gtgatcgcct ttgcaaccta ccccggcgct
     4801 tacaacttgc tggattttga aagctcactg gaatcgattc ggcaggcgcg acgcgactgc
     4861 gacatcctga tcgtgacatt ccacggcggc ggggaagggg ctgcgcggca gcacgtatta
     4921 ccaggcgatg aaactttttt gggggaagat cgcggcgatt tgcggcgctt tgcgcacgcg
     4981 gcgattgatg ccggtgcgca gatggtgatc ggcagcggac cgcatgtggt ccgcgccatg
     5041 gagatttacc agggtaagct gatcgcgtac tcgctcggca acttcgcgac ttacggtcct
     5101 ttcaacctga gcgccgaaaa cggtctttct cttgtcctgg aagctcacct cgcacccgat
     5161 ggatcgttcc tgcacggtca ggtttatccg gtgaagcagg agaagccggg cggtccgaag
     5221 ctggacccta cgatgagcgt tcttgcgatt ctgcgcgatc tatctgtgga ggactttccg
     5281 cagactgcgg tggcggttgg tccgcgcggc gagttgtggc tgccgggcgt gccggtgccg
     5341 gagtgcagca atgcgccgga cctgctcgat gcgctgatcg gtaccagacc ttgcggcatc
     5401 tacccttaac cagcgatcac ggcgaggatg gatcgtcatg cgaacgaaag ctgttgccgt
     5461 tctcgtttcc gtgttcatgc tggcttgcgg agcaacgctc tgcggagaac ctgccgcacc
     5521 gctggccagc ctggaaccgg cgctgcagga agccctggaa cgggatgctg tctgttccga
     5581 aaaaagtccg tcgccaggag tgcccgtggc tacgcaggcg attgtggccg gtggcaggaa
     5641 ggcgggggtg atcgcatcac cgcaggaccc gtgccactgt aaaagggaaa actgctctac
     5701 atttgtttac gtgaagtcag gtgagcgatt tcagttggag ctggccgata tgtttgcatc
     5761 aatccggccg atgaagatcg ccaaacacgg attgccctca ctctccgcca agttccagtt
     5821 agacgaactt cgggaagaga ccacgatttt tgactggaac gggcagggct atgagccttc
     5881 attgtgcgcc acggtgagca aacggcccaa ccaacgcgtg ccctcgatcg taaagcacca
     5941 gtgcagaact tcggcgcgaa ccatccctcg ctaatacatt tgtaaaacca ccatggtctc
     6001 ggcgaaaata gggcagcatt tggccgattc ttacagggtg gagtgtatcc ttccggccat
     6061 ccactccgtt caacagcgac tcgccaaaga cccgcgatcc cggttgcgaa ccgagcaggg
     6121 atgcgtctaa gcctcaggag attatggcgg cattaaagaa cacttttttt atccttaccg
     6181 ttctctttac aaccttctgt ttggcccagc ggcttccaga caacgtggcg ccgcgccact
     6241 acacgctctt gttcgccccc gacctgcaga aggcgacgtt cagcggcgag gagacgattg
     6301 aggttgatct ggcgaagacg gcgtcggcga tcatacttaa ctcggccgag atcgagatac
     6361 agcaagctga actgatccag gggcagaaca cacagccagc caaagcaggc tttgatgaag
     6421 ccaaagagca ggtaacgctg agtgtgcccg ccgcgcttga ggcagggccg gccagtattc
     6481 acatcaagtt caccggaaag ctcaattcgc agttgcgggg tttttacctg gcgcacagcg
     6541 cctcccgcaa ttacgccgtt acgcagtttg aaaacactga cgcgcgccgc gcgtttccgt
     6601 cttttgacga gccagccatg aaggccgtct tcgacgtaac gattgtggcc gaccagggcg
     6661 acacagccat ctccaacggc cggattgtcg cggacacccc ggggccggat cagggcaagc
     6721 acaccatcaa gtttgcgacc acgccaaaaa tgtcgagcta cctggtggcg atggctgtgg
     6781 gggatttcgt ctgcaatgaa ggctcggccg acaacatccc ggtgcgtgtg tgcggaacac
     6841 cggataagaa gccactgggc actgcggccc tgcgttacgc ggaggagatt ctccactatt
     6901 acgaccagta ttacggaatt ccttatccgt tcgggaagct ggatattgta ggcgcaccgg
     6961 atttcgaggc tggcgccatg gagaacacgg cagcaatttt ctatcgcgag tcggacctgt
     7021 tcattgatga tcagcatgct tcggtgcgca gccatcagaa tgtattcgaa gtgctggccc
     7081 acgagatggc gcaccagtgg tttggggacc ttgtcaccat gaagtggtgg gacaacgtgt
     7141 ggctgaacga gggatttgcc acgtggatgg agctaaagcc atcccaggcg ttgcatccgg
     7201 agtggaatgc gctggtgcag ggcgtgaatg ccaccaacaa ggcgctggtg ctggattctc
     7261 tgcgtaacac gcatcccata cgggccaaag ccgagacgcc ggaagagatc aatgaaatgt
     7321 tcgatccaat ctcttacgaa aaaggggcgg ccgtgctccg catgctggaa acttacgtca
     7381 caccggacgt gttccggcgc ggagtgaatt cgtatctgcg caaattcgca tactcgaatg
     7441 caactgccga ggacttctgg caggcgatga cgctggcatc gggccggccg gtgaacaagg
     7501 taatgccgac gttcatcgat cagccgggtg agccgctgat taccgtgaag acggcgtgca
     7561 cggctgctgc ccctgagccg aaggcttcac ggaagaaatc aaagcgctcg cggacgcgac
     7621 agatagctcc tgcgaaaccc aagctggaaa tcactctgga gcagaccagg ttcctctctg
     7681 atccgggcgc caaacccgat aattccacat ggatggcgcc gatttgcgta aaggccgaag
     7741 gtggccatcc gttttgccag gttgtgagtg agaagcagca ggcgcttccg gcggctgggt
     7801 gcgcgtcgtg ggtctttgtg aatgcaaatg cgtccgggta ctaccgcacg cattacgatg
     7861 cggagcttat gaaaaagctg agcgcggtag ccgcatcggc cttaagcacg gcggaaagat
     7921 tgtcattgct gaatgacgaa gccgcgttga tgggtgcggg ccaggagagt gcagctaact
     7981 atcttgatct ggtgacctca ttgcgtgaag acaatgaacg ggcgattctg gaagggatag
     8041 gcccggctct tgcagagatc catgactact acctgaacca ggcggataaa gcagcgtttg
     8101 ctgcatgggt gcgcagcacc tttgggccgc agctggagaa attcggatgg tcgccgaagc
     8161 cgggtgaaac cgacgatcag cgggctgctc gtgctctgct ggtgcagatt gtgggagaac
     8221 tgggcgagga tcctgccgtg atctcggaag caggtaaggt ggcaaagcag tatgtaaccg
     8281 accctaccag tgttgacggc agccttgcgc acacggcgtt gcgcgtctct gcgatgggca
     8341 atgatgcggg attgttcgaa cagtttcttg gcgctctggg caagccggga atcacgccgg
     8401 aagaaacgaa taactacgcg gaagcaatca gccgattcac agatgcgaag gtggtgaccc
     8461 gctggctgga gcgcattgtg gcgcctgaga cgcgtaatca ggacgcggct ggatatcttg
     8521 ccggcgaatt gcacaacgtg gcagttcagc agcaggtatg ggactggatt cgccagcact
     8581 ggccggcagt ggaaagcaaa ctcacattcg gcagcggcgc ggccattgtg ggcagcactg
     8641 gcgcgttctg tgaacctgcg atgcgcgagc agacacaacg gttctttgcc gagcacaaag
     8701 tcgcgtcaac cgagcgcgca ctgcggcaga gcgtggagga aatgaatcgg tgcatcagca
     8761 cccgtcccaa gctaagcggc gaggtggcag gatggctgca gcagcgcggg acctcggcga
     8821 gcgcggcgca ttagcgggcg gaaagctgat agtcgattgt caccgcgccg gagcgggcgt
     8881 cctgccggcg tatgtatcgc ggcgcgcagt tcctgcaatt gataatcagc tgatccggac
     8941 cggtccattg cagagtaata cccgccccaa gagcgtcctg ctcgatcgtg aagaccggag
     9001 attgctgcaa ctggcccgag aagaagccaa gctccagcgg cgatgccccc gagcggatgc
     9061 ttatagtggt gacaaacggc gcctcttcgc cgcagcggcg ctgaaggacc gatgcgatcc
     9121 agcgcttatc cgggctgaca gtttcagaga gtggcttgtc aggacagcgt gggcgaaggt
     9181 ggaagtagat cgcagtcagg gcgagaaaca agatcagcat gccgccggca aagccgagac
     9241 cggccttcca catcttgcgc gcgaaagggt ccttgatcac taagcgggca ccctggactt
     9301 tatttcacgc caaagctgag cgcggccttc gccggtcctg gcggagtagg gaacaagctc
     9361 atgaattccg tgttcacgct tgagggcagt caaggcattc cgcagcttgt taccggagag
     9421 cttgtcagcc ttggtgccaa tcacgagaaa ttcccgctga gaatgcttca ggaactcgat
     9481 cagttgttga tccgagggct gcgcggggat gttgatatcg atcagaacga cgcacagctg
     9541 aaggacagtg cggtgcttga gataaggttc aatgaattta ggccactcgg cagagatgga
     9601 ccgcgagatc tttgcatagc cgtagccggg aaggtcaacc atcaccaggt caggcgcggg
     9661 gtggctgggt ttatcaaaga tgccgataaa gttgattgtc tgggtgcgcc cgggagtcga
     9721 actaacgtgg gcgatcttct ggtccagcaa agagttgatg aggctggatt tcccgacgtt
     9781 tgaacgtccc agaaaggcga actcaggcgg gccttcacgg ggaaaagcat ccgggtgggc
     9841 ggcagacgtc agaaatttgg caacaggcgg cttcatcccc tgatccagaa tgacataaac
     9901 ccgcgctgcg gctcaaatta agagacttcc gcaccgtggc atgtgataaa gtgcgctgcc
     9961 atgatcagag ctgctcggat gttcctgatt gtttctcttc tggccgcgtt cagcggcctc
    10021 atttcagcaa aagacaaggg cagagaaccg gcgccccgct tcaatgcaac cgccaacaca
    10081 ggcgagaagt tcaacaacga gtcgctcaag ggcaaggttg tgcttctgga gttctggacg
    10141 acgtggtgcg ggtattgcga gaaagaactc ccgtatgtcg aacggctgaa cgaggagttc
    10201 gaaggcaagg ggctggtggt gctggcagta aatgtcggcg agtcgaggaa gacggtcaaa
    10261 aaatatctgg accagcatcc acgcaagacg cgaatcgtgc ttacggacga cacgaacctg
    10321 gctgcaatgt ttgccgcaaa gtcttatccg atttatgtgg tcattgaccg agacggaaac
    10381 atatccggta agcaggatgg cgccggaggc gaacgagcgc tgcgaagtct ggtgggtgat
    10441 ggagggttga aagagcttgc agacggcgat gattgattac aaaaaggcga gggacagaaa
    10501 tcccccgcct catcttctgc taccaggctt tagcctcgga ctacttgtgc tgcgtgccag
    10561 ttgtattctg cgaggacatt ggctgaagct gcaggtcctg cgccagctta aagctcagct
    10621 cggtttcggc cggcagttct ttgcccttgc cggtataaac ctgtgcacca gcgccgccag
    10681 cgcccccgac aatggctcca atcgctgcgc ctttaccgcc gccgagcagg gcgccgagaa
    10741 ctgcgccgat cgcggccccg ccacctacat atttaccggt acgcttatta gcaccaattc
    10801 cacccggagc agagctctct ttgctcgccg cctgcagcat gtattgctgg ccgtttacga
    10861 caaccgactg caagtcgaga ttcgtgtctt tgccgtcgga tgtgggttcc gcgacgagtt
    10921 gtgcccgcga gccccgcgga atcagaactt tcccggaact atcggtcacg tcagtgctga
    10981 tgctgccctg gtaggtggca ttggcttctg gcttggccgg gatggccgtg tcagtccgta
    11041 ctttgatggt ggtgtctttc ggcaccacgc cctgggcgtg ggcgctgatg cccgcgaccg
    11101 ccaacagcaa ggacgaggcg aaaatgttga gtttcagctt cattggtctg tctcccgtga
    11161 ctgagagatg ccggtggcgg gcggcgggtt gtggcggccg gggaacgctc accagagctg
    11221 cgcattggga aatcgcccgt cctcagcaaa accgcctggt ttgagaaatc cccgatttat
    11281 tctgcaacct ccggctcaat cccttcgtat tgacaagtta taggagcagg actatgctcc
    11341 tataacgttc ctatatgacc gagctgaaca agaagaacga tgtatggcag ggcacgatgg
    11401 cgcttatggt gttgaagacc ctggagagca tggggccgct gcacggctac ggaattgccc
    11461 gccgcattga gcagatcagc ggagaccgtc taagcctgaa ctacggcagc atctaccccg
    11521 cactaatgcg gctggagcag gaaggctcaa tcgcgtccga atggggcgtt tccgagaaca
    11581 accgtaaagc caagtattac cgccttactg caaatgggcg ccggcagctc aagaaagaaa
    11641 cacaggagtg ggaagaggcc acctcgatcg tggcgcggtt ccttgccgcg aaggaggaat
    11701 tgtgaagcag ctcaggagac tatggggacg gctgcgcggc ctcagaacgg ctgaggcccg
    11761 ggagcacgat atgcggcagg aattcgagtc gcacatggag atgcacatcg cggataacat
    11821 tcggggaggt atgagcccgg atgaagcgcg tcgcgaggcg gccctgaaat ttggcggcat
    11881 ggagaccgcg aaggagtccg tgcgcgagga gtcgcgtttg ctctggctcg aaaccgcatg
    11941 gctggatctg agatatgccg tacgcggcct gcggctcaat ccaggatttg ccgccgcggc
    12001 tattctctcg cttgctctgg gtatcggcgc cacaatcgcg atcttcacgg ttgcggacaa
    12061 tctgctgctg aggtcactgc cgtatccgga tccctcaaag ctggtaatga tttatgagaa
    12121 aaataatcgc ctggacgtgg agcacaacgt agtggcgccg gccgactact ttgactggaa
    12181 ggcgcagagc tcctcgtttt cggcgatggg gggatttttc gattatcagg tggtgttcgg
    12241 cgacggcaag cactctgaag aaatcgatgc gcaggcggta accggggaag tcctgcccct
    12301 gctcggcgcc aaagcggtgc gcggccgtgt gttcacgccg gacgaagatt cagacaaggc
    12361 ttacgtcgcg gtgatcagct atcggctgtg gcagagttgg ttcggtggcg acgaaagtat
    12421 catcggccgc acagtacagg taaacgctcg tccattcacg gtagtaggcg tgctctcgcc
    12481 tgacttctac tttcacacca gatccactgg catctggctg actctcgggt tgaaaaactc
    12541 gcccgaattg cggtccaaac ttggccgctg gctgcttacg gttgcgcgaa tcaaacctga
    12601 tgcatctctc cgccaggcac gcactgagat ggccggcatt gcccggcgga tagagctgga
    12661 acaccccgag acgaacaaga actggagcgt gaacgtggag cccctgcgcg agtcactggt
    12721 aggaaaggta aggacgcaat tgctgatcct gctgggggcg gtaacgttgc tgctggcggt
    12781 ggcctgcgcg aacgttgcga acctgctgct ggcgcggtat acggcaagga cgcgtgaaat
    12841 tgccgtgcgg ggggcgctcg gggcaactcc tggtcggctg gtgcggcagc tgctcacgga
    12901 aagcattgtt ctggcagtca ccggaggagc actcggtctg gcgcttgcct gccttgccgt
    12961 gaattggatt gttgccctgg ctccgaaaga gcttacccag tcggttgaag tgacattcga
    13021 ttcgcggatc gtgatctttt cgtgtgccct tgcgttgatg accagtgccg cattcgggct
    13081 ggcgcccgcc gtactggcca tgcgccgcga tctcaaccac gcactgcatg aggagagccg
    13141 gacgagcacc gggacggggc accgcttcag aaactggctt gtggtgggcg aaatcgcctg
    13201 ctcggttgcg ctgctggcgg gcgccggttt gcttctccga agcatgatcg gtcttgagaa
    13261 cgtgaatccc ggactggatg cgggcgacgt gcttacattc cgcgtaagcg tgcccaaggt
    13321 gcgctatccc acagacgaaa agataacgca attctttgca gatgccgtgc agcgcatggc
    13381 acaactgccg ggcgtccgtt ctgcgagcgc agtcagttat ctaccgttca acggcatggc
    13441 agcagcaact gatgtcataa ttggcggacg ccctccggcc aagccgggcg aagggatcgg
    13501 cgccgtcgtg cgcaccgtgt tgccggacta cttccgcacg atgggtatcc cgatcacgca
    13561 cgggcgggat ttcacatatg ccgatgatct aaccagcgcg ccacatcgct ttgttgtgaa
    13621 tgaggcgttt gcacgcaaga atttcccccg agaaccagtt ctgggaaagc agatcagcgt
    13681 gtacatggct gaccagaacc cgatgggtga gatcatcggc gtggtgggcg atgtgaagga
    13741 gggagcactg gatcaggagc ccacgcccac ggtgtattac atccacagtc accttgccta
    13801 cagtcagatg gtgttcgtgt tgcgtacgca aagcgatccg ctagcgctgg cagcgcccgc
    13861 ccgcagaatc ctgcagagcc ttgatccgga gctaccaatt tcagacctca aaaccatggg
    13921 agcggtgata cggttaacct atgcgcgaca gcagttcagc acagtgctgc tggcgggctt
    13981 ctctctgact gctctggtgc ttgcagcgat tggaatctat gggctgctgg cttactcggt
    14041 ggtacagcgc acgcgcgaga ttgcggtgag agtcgccttg ggcgccgagc cgcctgggat
    14101 cattcgtatg gtggtcggca acggcgtccg gctggcgatt gccgggacaa tcgttggact
    14161 cgggggagca ctgatatttt cgggagtcat gaaaagcatg ctgtacgaaa tcagcccgcg
    14221 tgatcctctg gcattcacgg ccgcgcctgc agtgctgttt accattgcct tgctcgcatc
    14281 ctacctgccg gcccggcggg ccgcaaaggt ctctccaatg gaggcgctga ggaacgagtg
    14341 aggacaaatt gccaggattg ccaaaattga tgattgcggg cgataacact ccgagctcgt
    14401 cgtgcgcagg cgagggcagc ctgcgctcca cacgcaaagt caggcgttct ccgaaacttt
    14461 agtagacgat cactacaaca caattcccaa aaataaggcc cgccatgccg gcgggccgaa
    14521 gtggcgttcg aaggagctct tacaaatagc gttcgcgcga gatgttctcg gttgaggtgg
    14581 gaatcggctg gacggcctcc tgggaaactt caggaagcgg ctgctccaga gcgatcttga
    14641 gcacctggtc catgttttcc acggggtgga ccttcatatg gttgcggatg ttctccggca
    14701 cctcggccag gtctttctca ttctcttttg gaatgattgc ctccgtgatt ccagcacgca
    14761 gagccgccag cagcttttct ttcaatccac cgataggcag gaccttgccg cgaagagtga
    14821 tctcgcccgt catggcgact tcgcggcgca cgggaatctt gctcaatgcg ctggatatcg
    14881 ccgtggccat ggtaataccg gcggaaggcc cgtcttttgg aatggcgcct tccggcacat
    14941 ggatatgaat gtccacgtta cggtaaaagt ctttgggcac gcccaggcgc gcagcgcgtg
    15001 agcgtacgta cgacatggcg gcctgagccg actcctgcat cacctcgccg agctggccgg
    15061 tgatggtgag cttgcccttg ccttccacga tggcaacttc ggtcgagaga atcgagccgc
    15121 cgacctcggt ccaggcaaga cccgtaacga gaccgacttc gctcttctcg tgtgccaggg
    15181 tatcgcggaa cttggccact ccgaggaact cggcaaccgt ctgagcgttc acggtgagcg
    15241 tgtacgcctt gtctttcacc actttgcgcg cgactttgcg gcagaggttg ccgatctcgc
    15301 gctcgaggtt gcggacgccg gcttcacggg tatacgaccg gatgatttcc ttgatgccgt
    15361 cttccgtgaa ctgaatctgc tgttcagtca ggccggtagc ttcacgctgc ttgcgcacca
    15421 ggaactgttt ggcgatctca accttttcca gttcggtgta gccatgcagc cgcaggactt
    15481 ccatgcgatc ctgcagggca gccgggatgc tgtgcagcac gttagctgtg gcgacgaaga
    15541 agacctgcga aagatcgtat tccacgtcca ggtagtggtc ctgaaacatc cagttctgct
    15601 cagggtcaag aacttcaagc agcgctgccg cggggtcgcc gcggaagtcg gaggccatct
    15661 tgtccacttc gtccagcatg aaaaccgggt tcttggtgcc ggccttcttc atcatctgga
    15721 tgatctggcc cggcagagcg ccgatgtaag tgcggcgatg gccacgaatt tcagcctcat
    15781 cacgtacgcc gcccagcgag aggcggacaa acttgcgacc agtggccttg gcaatggaca
    15841 tacccagcga ggttttgccc actccgggag gtccaacaaa gcacagaatg gaccctttgg
    15901 gatttttcac caattggcgg acggccagga actcaaggat gcggtccttg atcttttcca
    15961 ggccatagtg atcgccgttg aggattttct ccgcgtgctc aatattgcga atctcttttg
    16021 acttcttctt ccacggcaca gccagcagcc aatccagata gttgcgcgaa accgtggact
    16081 cggctgacat cggcggcatg gcctcgagct ttttcagctc ggtgatggcc ttttcctgaa
    16141 cgtccttggg catgccggcg gattcgatct tcttcttaag ctcgtcaaac tcgctcttct
    16201 cgccgcggcc cagctctttt tgaatggcct tgatcttctc gttgaggtag tactctttct
    16261 gggcccgctc catctgacgc tttacccgcg tctggatggt gcggtccatg ttcagctttt
    16321 ctatctcgat atccagaacg tccgcaatcc ggttcagccg ctcgaccgga tcgaaaatct
    16381 ccagcagttc ctgcttttct tcgattgaga gctgcaggtt ctgggcgatt gtgtcactca
    16441 gtttggctgg gtcattcatc ccggtgatga tcacgggttc cagattgagc gactggcaga
    16501 gctttacgta ctggtcaaac aggttgtgca cgcgctggag ggccgtttcc agaaccggag
    16561 tattttctgt ggagtacttc acggtgcgga cggtggcctc aaaatagcct tcattgttct
    16621 tgaggtcgag aatcttgccc cgctccacgc cttcaaccag gaccttgatg tttccgtctg
    16681 gcagcttgag attctgaacg atattggcaa tggtgccgac ctggtagatt tcgtgaggct
    16741 tgggttcgtc aacgctcgcg tcgtgctggg tggccaggaa gatcttgcga tcagaagcca
    16801 gcgcctcttc cagggcgcgc acgctggatt cgcggcccac gataaatggg gtcatcataa
    16861 aggggaagat gaccacgtcg cggatgggca tcatgggaag ccggcgtgtt tcgaattttt
    16921 ccttgttttg ggtcactgat tatgccttct gcgcgcttcc ggttgaggtt tgacccggag
    16981 aacgtgctgt attccaagaa taccatgttg agcaactctt tttaatccca gagtttcgtg
    17041 catcacggga aagacttaga agaatcaata ctttccaggg gcgaaatacc aaagttttgc
    17101 gccccagggt tactcattgg atagcggcag gcccatttgc gattcttcac ttgattttcc
    17161 tttggccagg gcgtgcatct gggcgatata gcgcttgctg tcgaactttt tggaggtgct
    17221 cttgaaggac atgtagcgga cctggccgaa gataggtcga tcaaaccagg gccggtcatg
    17281 ttttccgacg atcgcccacg cgattccggc gtagccgtta gggtcccggc catcgagttc
    17341 gtacttgtca ttcatttcga ctgcggtgcg gtaagcctga gcaggcgttt tgctccactc
    17401 caggattttc ttggcccagt acatgcgcat gtagttgtgc atccagccgg tcatggtcat
    17461 ctggatttga gcggcgttcc agagcggatc gtgggtttcg gcattttcga attgagagcg
    17521 cgagtagatt ttacgctcgt cgaccgcatg ttcggccagt gatttgtgcg cccaggccgg
    17581 gccgctctca aaattgtcgt aatcggggtt gaaacggacg aagttgatcg ccagttcacg
    17641 gcggacgatg agctgttcga ggaaggcgtc tttcgcggct ttgggagctt cggccttctg
    17701 gaccgctaga gcaatggtgt gtggccctaa atggccgaaa tgcaggtacg gcgaaagatg
    17761 actggtagtg tccagctcag ggtggttgcg gtccttcaca tagccgcgca gccggtcacg
    17821 aaggaagctt ttgaggtgct tgaggccttc ttctgtgccg ccagtgaaac gcggcgaggg
    17881 agcgacggag cgatccagag tccagtcctc agtgatatcg aagtcaggcg ggagggaagt
    17941 caggccccga ggcggtttcc acggaaattt tgctgaagtg ttccccacag ggacgaggaa
    18001 atccggcagc aaacgatgaa tgatggggcg cgcagtataa gcggcatgct gctctttgac
    18061 gaggagttgc gaaggaacaa tgacgtcggc gtcaacgatc catagcggca gcttgcactg
    18121 tctggcaatc aatgctcgcc agcggtgtgg ctcgcgcatg ggattttcat cgccgatgac
    18181 aagtgcaggg cggacctctt cgcaaaacct cagcagatga tgatctgggt aacggcgcag
    18241 gacgaagccg atgccgcgat cctgcaatcg ctgggcaatg ggcgcgatac cctgttgcag
    18301 aaagcgataa tgacgcaggt ttgcgctggg ataatgcgga acaggagcga gaaagacgac
    18361 gcatggcttt cccaagctgt tggcggcgcg gacggcgatt tcgagagcag gattatcgag
    18421 cgcgcgctgg gcgcgctgca tccagtagac aacgcaggtt ccttcgggat cgggatcacc
    18481 tttgcgcagc acagagacac gcgggtgaga ggagaggcga gcgagggaca ttgctacgag
    18541 tatattagcc ggacgcagcc gcttgaatcg ggtgatctgg agacgggaga ttgggagatc
    18601 ggttcacatc ccgagcggag cgatgagtcc tatcagttct tatgggcgct taaaagcagg
    18661 gatgacagag ccccaaacaa cagtgagaat tattgcctta cctcaccatt ctcgaagagt
    18721 agggttccct cgcttcgctc gggacacagc aaaactcact tcacaacatt cttcccaaat
    18781 ttgaacgccg ggcccacgga gatacgcacg ctgttgcggc cgccgttgag caaattgtcg
    18841 aaaagattta cgtggacaaa atcgacgccc atcctgagag cgaaatggtt tccggcgttc
    18901 agatcaaatc cgccgcctac gccgtagaaa ggtttaaggt cgctctgctt gcccccgggg
    18961 gcaagagttg ccacaacgat cccctgcact gggttggccg gctttagagt ggccagctca
    19021 tgcataccgc cgatggcggg acgaacgaag aaagtaaccc acttgagctg gcggaaattg
    19081 atctgcgggc cggcggtgaa tgtataggtg atcgaatcga atgggatcgc cgggtttggc
    19141 ccgagcaacg gcaggatggg aacgagctgt gcctgaagag caggcttcag gtcctgcggg
    19201 cggagatcgc tgtggccggt gaagtaactg tagtccgcgc caagggcgag ccagcggttg
    19261 agattgatgc cgaattggcc attcacaccg cgttcggcga ggttgagctt gggcgacgcc
    19321 aaataggaga agccggcgaa cgcgtcatag cggccgacgt aatcttgttg agcgaaagcg
    19381 gaagaagcac aaagaagaag tgcggcaaga acaatgaaga tccggttcat caggtttcct
    19441 ttcgattcta tgaccaactg ggatgaacgg ccggaccagc ccaggtttga ctcaactggt
    19501 tcgactcggg gaggaacttg atgggatgcc c
//
LOCUS       DASQYP010000098         6526 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_236273, whole genome shotgun sequence.
ACCESSION   DASQYP010000098 DASQYP010000000
VERSION     DASQYP010000098.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 6526)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6526)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6526
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_236273"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(153..2432)
                     /locus_tag="VE783_03310"
     CDS             complement(153..2432)
                     /locus_tag="VE783_03310"
                     /inference="COORDINATES: protein motif:HMM:NF013592.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008237 - metallopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M1 family aminopeptidase"
                     /protein_id="HYX52452.1"
                     /translation="MLNPSFDPADVHLVREVSLDREDLHISLSDGTLALMRTVDGRVT
                     GAVFEGQGEILLIAPDRAERTSLALFTGAAVLEQRFTTAYLRFVDDKLVDELQQGFRP
                     LPPDEKAQDFISRWLEPSRALAPRDSLPLVQALTNTGDSALRYLHIRLGGTTVGVFDV
                     FLDSNATEQISVAQANVRDQNAYYDVWTSFPMRSMRNETHGSGVAHSPSAVRFELRDY
                     NVRVSAEPPSQIRAEAEVTLVPHRSGQRTFVLELSRYLKLDEVRMQGQPLQLIQNEAV
                     SGSDLARRGDDLIGIMFPAALEKERPVRLQFKYSGPVMFDTGGGLLYVGSRGTWYPNA
                     GPNFSNYDLTFDYPADWTLVATGKPAGETEQGGRRTSRFVTQKPIARAGFNLGRFEIG
                     TSQTEGVQIHTYAAKVVEQSLAARTARVGRKPEPSREVKQLASQTAAAVQFMAGELDP
                     FPYADLQVTQLPGMLSQSWPGLIYLSSMAFLDADERRAAGVRDPYTDLLLSKLMLAHE
                     TGHQWWGDAVDWVSYRDEWIIEALANYSALLMLEKDDPQAMRTALQYYRGELLRETPN
                     GIIADAGPVTLGQRLTSSHFPDAYERVLYGRGTWLIHMLRHMLRQASGGKDDALFFTA
                     LKGLLARSPNHKISTGDLEAAFEAVLPRSLTFESKRSLDWFFDTWVNGASIPQLALED
                     VKIVPAARRNRVTGSIRQARCDKDLVTAVPIYAVDAQGKSRFLSFVFVDDPKTDFTLL
                     APAGTKQILLDPEGMVLRR"
     gene            2599..4008
                     /locus_tag="VE783_03315"
     CDS             2599..4008
                     /locus_tag="VE783_03315"
                     /inference="COORDINATES: protein motif:HMM:NF025910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HYX52453.1"
                     /translation="MIIPFCCAALLALPAAADTIVLKSGTRIVVDSVREENGRVEYTI
                     GDNTLTLPKSIVARVETGPPASAAKKTTDSDPITTEELPDIREQLAVEDSVMKRVIQG
                     DKVDAAALEQVEKAGPPGQPAAAYAIAASLEQGKGDFKSASEYLRRAIQLLPHHPVLL
                     ENYAALLLRMNRFEEALMYAEQAAHTPPPSADDYTVLGFTYYKNDRNRDAIAALKKSM
                     QIAPSDKAKSLLDRIERESRTEAAFHEQSSSHFTLRYEGSQSADALRQQILNALEGDY
                     RVLQNELGASPPTIFISLYTDQAFFDVTQAPAWSAALNDGKIRIPISGVKSVTPELAR
                     ILRHELTHSFISFITHNRAPQWLNEGVATLEQGVEVAPFGVRLASLYSAGQQIPLSQL
                     EGNFESYSSGEASVAYAESVAAVQFIRETYGMPGVSALLQRIGDGQSVESALRGTVHG
                     GYAELEAQITNYLKKNYGS"
     gene            4094..5770
                     /locus_tag="VE783_03320"
     CDS             4094..5770
                     /locus_tag="VE783_03320"
                     /inference="COORDINATES: protein motif:HMM:NF017021.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AsmA family protein"
                     /protein_id="HYX52454.1"
                     /translation="MKRLLAIAGIIVGVLVLIVVLAPLFINVDSFRPELEKTLSTSLN
                     RQVEIGKLDASLFSGGASASQITIKDDPAFNSGAFLQASSLKVGVRLMPLVFSKRLEV
                     TSITVDKPDIVLLKNAAGKWNFSSLGASQPKSQAQPSSGKPMDVSVERFEITNGKIRI
                     GQSSGHKAGQERIYTNVNLTANNISTTSQMPFSLSADTPGGGALKLEGKAGPLNQQDA
                     ARTPLDARVSVQHTDLATTGLIDPSSGLAGSVDFEGNLTSDGKTVRSEGKGKATNLRV
                     VKAGAPAKAPISLDYKSDLNLDSEAGNLNTAIHTGASTVTAAGTLSAKGEDTLANLKL
                     QGNNMAVNDVEALLPAFGVILPSGASLKGGSINMDMTAEGPLDRLVITGPLKISDTHL
                     SGYDLSSKLGALAAFSGIKPSSDTLIQTVSSALRVAPEGIKADNIVLDVPSIGNLTGN
                     GVIGNNNSLDFKMLLKLSGQAGNTLGQLTNISSSVIQSKGLPFLIEGTTQNPKFVPAL
                     GNDLKGGLKDTLLGAVGGKQGTQNSGQQKPDLKGVLGGIFGKDKKKTPPQ"
     gene            5869..>6526
                     /locus_tag="VE783_03325"
     CDS             5869..>6526
                     /locus_tag="VE783_03325"
                     /inference="COORDINATES: protein motif:HMM:NF025010.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SurA N-terminal domain-containing protein"
                     /protein_id="HYX52455.1"
                     /translation="MKKSILICAAILAVAGALRADNIVDEIIARVNDTIITRSEFEKA
                     KQSQLQELKQNDPDDWQTRWAKSEKDILRDMIDQQLLVEKGKELGITGETETVKRLNQ
                     MRQQMNLPDMDALEAEARKQGVSFADFKEQIRVGIVAQQVVGQEVGGKLHITNEEVQE
                     FYDKHQKELEGPEEVSLSEIMISTQPKKENVENKDQKDKPAEDKTLPEDPAKVAQAEA
                     K"
BASE COUNT         1477 a         1893 c         1887 g         1269 t
ORIGIN      
        1 gcagacgttc atctttgccg tgagcccgcc catgagcaat cctgcaggcg agtggattgc
       61 cgatgaccct gatttctgga ggaactcacc gcctttgcaa cgtcaggcag gagcgaggaa
      121 ataacggcgg cgcggcgcgc tctttccaag gcttagcgcc gcagcaccat tccttccgga
      181 tcgagcagga tttgcttggt gcctgcgggt gccaaaaggg taaagtcggt cttcgggtcg
      241 tcgacgaata caaaactcag gaaccgcgat ttgccttgcg catccacggc ataaatcggg
      301 accgcagtga ccaggtcttt atcgcatcgg gcctggcgga tgctgcccgt aaccctgttc
      361 cttcgggctg ctggaacgat cttgacgtct tcaagtgcaa gctgcggtat cgaagcgccg
      421 ttaacccagg tatcgaagaa ccagtcgagt gagcgcttgc tctcgaatgt gagcgaacgc
      481 ggcagaacgg cctcgaatgc cgcctcaaga tcgcctgtag aaattttatg gttcggggag
      541 cgcgccagca ggcccttgag agcggtaaag aacagtgcat cgtctttgcc gccgctggcc
      601 tgccgcagca tatgccgcaa catgtggatg agccaggttc cacggccgta aagcacgcgc
      661 tcataggcat cgggaaagtg tgacgacgtc aggcgttgtc ccagcgtgac cggccccgca
      721 tcggcaatga tgccattcgg tgtttcgcgc agaagctcgc cccgatagta ctgtagcgcg
      781 gtcctcatcg cctgggggtc gtctttttcc agcatcagca gagcgctgta attggccaac
      841 gcctcaatga tccattcatc gcgataagaa acccagtcca ctgcatcgcc ccaccactgg
      901 tggccggttt cgtgggccag catcagcttg ctcagcagca aatcggtata cggatcacga
      961 acgccagccg cgcggcgctc gtcggcatca agaaacgcca tgcttgagag gtagatcaac
     1021 cccggccacg actggctcag catgcccggg agttgtgtga cctgaaggtc agcatatgga
     1081 aatggatcaa gttcaccggc catgaactgc accgcagccg cggtctgact ggcgagttgc
     1141 ttcacttctc gtgaaggttc cggcttgcga ccgacgcgag ctgtgcgcgc tgccagcgat
     1201 tgctctacca ccttcgccgc ataggtgtga atctgcacgc cttcagtttg tgacgtgcca
     1261 atctcaaatc gtccaaggtt aaatccggcg cgcgcgattg gcttctgcgt gacgaagcgg
     1321 ctggttcggc gtccgccctg ctccgtctcg ccagccggct tcccggttgc caccagcgtc
     1381 cagtccgcgg ggtagtcgaa ggtgagatcg taatttgaga aattaggccc ggcattcgga
     1441 taccaggtgc cgcgagaacc tacatagagc agccctcctc cggtgtcaaa catgaccggg
     1501 cctgaatact tgaactgcag acgcaccggc cgttcctttt ccagggccgc cggaaacatg
     1561 atgccgatca ggtcatcgcc gcgccgggcc aggtcacttc cgctcaccgc ttcattctgg
     1621 atgagctgga gcggctgccc ctgcatgcgt acttcgtcca gctttagata gcgcgagagc
     1681 tccaatacaa acgtgcgttg gccgcttctg tgcggcacca gcgtgacctc ggcttcagcc
     1741 cgaatctggc ttggcggctc cgcactcacg cgcacgttgt aatcacggag ttcaaatcga
     1801 actgctgagg gcgagtgcgc caccccactg ccatgcgtct cattgcgcat ggagcgcatt
     1861 gggaatgagg tccaaacgtc gtagtaggcg ttttggtcgc gtacattggc ctgcgccacg
     1921 ctgatctgtt cggtagcgtt gctgtcaaga aagacatcaa agacgccgac cgtagtgccg
     1981 cccagccgga tgtgcagata tcgcaacgcg gagtcgccgg tattcgtgag cgcctgtaca
     2041 aggggaagcg agtctcgcgg ggccagggcg cgcgagggct caagccaacg gctgatgaag
     2101 tcctgggcct tctcatcagg cgggagcggc cgaaagcctt gctgcagctc atccaccagc
     2161 ttgtcatcca caaagcgcag gtatgccgtg gtgaaccgct gttccaacac agctgcgccg
     2221 gtgaagagag ccagtgacgt gcgttcggcg cggtccggcg caatcagcag gatttccccc
     2281 tggccttcaa acacggctcc ggttacccgg ccatccacgg tgcgcatcag tgcaagggtg
     2341 ccgtcgctca gcgaaatgtg caggtcttca cgatcgagcg agacttcgcg gaccaggtgc
     2401 acatcagcgg gatcaaagga aggattcagc acctggcgtt gaagctcagc gccctcctgg
     2461 cgcgccggct ctggcggcgg gttctgcgca atgcatccag ggccccaggc gtatgcgagc
     2521 agtagtagta ctttcgtgaa atgaatgaaa aaagagcgcc ttaaacccat gccataatga
     2581 ccctgaaaac gcttgcgagt gattatccca ttttgctgcg ctgctttgct cgcgcttccc
     2641 gccgccgccg acaccatcgt gctcaagagt ggcacgcgga tcgtggttga ttccgtccgc
     2701 gaagagaacg gccgggtaga gtacaccatc ggcgataaca cacttacact tcccaaatcc
     2761 atagtcgcac gggtggagac tgggccgccg gcgagtgcgg cgaaaaagac caccgactct
     2821 gacccgatta ccaccgaaga actaccggac attcgcgagc agctggcggt ggaagatagt
     2881 gtgatgaaac gcgtgattca gggtgacaaa gtcgacgccg ccgccctgga gcaggtggaa
     2941 aaggcaggcc cgccgggtca gccagcggct gcgtacgcga tcgcggcaag cctggagcag
     3001 ggcaagggcg atttcaaatc ggcgagtgaa taccttcgcc gcgcgattca gttgctaccg
     3061 caccatccgg tgcttctgga gaactatgcc gcattattgc tgcgcatgaa ccgctttgaa
     3121 gaagcgttga tgtatgcgga gcaggcggcc catactcctc cgccctccgc cgatgactac
     3181 actgtgctgg gattcaccta ctacaagaac gaccgcaacc gcgacgccat tgctgcactg
     3241 aagaagtcaa tgcagatcgc gcccagtgac aaggcgaaaa gcctactgga ccgtatcgag
     3301 cgcgagtccc ggacggaagc ggcatttcac gaacaatcca gcagccactt caccctgcgt
     3361 tatgagggct cgcagtccgc ggacgcattg cggcagcaaa tcctgaatgc tcttgaaggc
     3421 gattaccgcg tcctgcagaa cgagcttggc gcatcgccgc caacgatatt tatctcgctt
     3481 tacaccgatc aggcattctt tgatgttacg caggcgcccg catggtctgc cgcattgaat
     3541 gacggcaaga tccgcatccc gatctcaggg gtcaagtcag tcacgcctga gctggctcgc
     3601 attctgcgcc atgaactcac gcactctttt atctccttca tcactcacaa tcgcgcgccg
     3661 caatggctga atgaaggcgt ggcgactctg gagcagggag tggaagtggc gccgtttggt
     3721 gtacgtctgg cgtcactgta ttccgccggc cagcagattc cgctttcgca actggaaggc
     3781 aatttcgaaa gttacagctc cggagaagct tcagtggctt acgcagagag cgtggccgca
     3841 gtgcaattca tccgcgaaac ttacggaatg cccggggtct cggctctgct gcagcgcatt
     3901 ggagatggac aatccgtgga atctgccctg cgcggcaccg ttcacggcgg ctatgccgaa
     3961 ttggaagccc agatcaccaa ttatttgaag aagaattacg gcagctaggc tgcgcccatc
     4021 cccatccacg gccggttccc aacgccagcg tgttcacctc ccaccaaccc ggctttctgt
     4081 tagcattttt gccatgaaac gcctgttggc aattgccggg attatcgtcg gagtgctcgt
     4141 gcttatcgtt gtgctggctc cgttgttcat caacgtggac agcttccggc ccgagctgga
     4201 gaaaaccctt tccacctctc tcaatcggca ggtggaaatc gggaaactgg atgcatcgtt
     4261 gttcagtggc ggagcttctg cttcgcagat caccattaag gacgatccgg cattcaactc
     4321 cggtgcattt ctccaggcca gctctcttaa agtcggggta cggctgatgc cgctggtttt
     4381 ttcgaaacgg ctggaggtta cttctatcac ggtcgacaag cccgacattg tgctgctgaa
     4441 gaacgctgcg ggaaaatgga atttttccag cctcggcgcc agccagccaa aatcgcaggc
     4501 ccagccgagc agcggcaagc ccatggatgt ctcggtggaa agattcgaga tcaccaatgg
     4561 gaaaattcgc atcggccaga gcagcggaca caaagccgga caggaacgga tctacaccaa
     4621 cgtaaatctc accgcaaaca acatatcaac caccagccaa atgccgttct cgctaagcgc
     4681 tgatactccc ggaggcggcg cgctcaagct ggaaggcaaa gccggacctc tcaatcagca
     4741 ggacgccgcg cggaccccgc tcgatgccag agtttcggtt cagcacactg atctggcaac
     4801 caccggcctc atcgacccga gttccgggct tgccgggagc gttgattttg aggggaacct
     4861 cacgtctgac ggtaagacgg tccgctccga ggggaagggc aaggccacaa atctccgcgt
     4921 cgttaaagct ggtgctccag ccaaggcacc gatctcgctg gattacaagt ctgacttgaa
     4981 cctggattct gaggctggga acctcaacac agccattcat accggcgcca gcaccgtgac
     5041 cgcggcagga actttgagcg cgaaaggcga agatacgctc gcgaatctga aactgcaggg
     5101 caataacatg gctgtgaacg acgttgaggc gctcctgccg gctttcgggg tgatacttcc
     5161 atctggcgcg tcgctcaaag gcggctccat caatatggac atgacggcag aggggccgct
     5221 cgaccggctg gtgattacag ggccgctaaa aatctcagat acccatcttt ccggatatga
     5281 tctcagctcc aaacttggcg cgctggccgc gttcagcggc ataaaaccga gtagcgatac
     5341 gctcatccag accgttagtt cagctctgcg cgtcgcgcca gaaggaatta aggcggacaa
     5401 catagttttg gatgttccct ccatcggcaa tctcaccggg aatggcgtga tcggcaacaa
     5461 taattcgctc gatttcaaaa tgttgctgaa gctttccgga caggccggaa acactttggg
     5521 gcagctcaca aatatttcct cttccgtgat tcagagcaaa ggcttgcctt tccttattga
     5581 gggaacaacc cagaacccca aatttgtccc ggcgcttgga aacgatctga agggcggcct
     5641 caaagatacg ctgctgggag cagtgggtgg aaaacaggga actcagaatt cagggcagca
     5701 gaagccagac ctgaagggcg ttctgggagg aattttcggc aaagacaaga agaaaactcc
     5761 gcctcagtag ctctgaagct ggcgtcctct cactgaatgc ggctacgctg ttagaatagt
     5821 tgcaataaag cccattctgc gcgttccaaa cgcaagagag cagcacttat gaagaagtca
     5881 atcctgattt gcgccgctat tctggctgtg gccggcgctc tccgcgccga caacatcgtg
     5941 gacgagatca tcgcccgcgt gaatgacacg atcatcaccc gctctgaatt tgagaaagcc
     6001 aagcagagcc agcttcagga gctgaagcag aacgatccgg acgactggca gacccgctgg
     6061 gcaaagtcag agaaggacat attgcgggac atgatcgacc agcagttgct ggtggagaaa
     6121 ggcaaggaac ttggaatcac cggcgagacc gagacggtaa agcgcctgaa ccagatgcgc
     6181 cagcagatga atctgccgga catggatgca cttgaggcgg aggctcgcaa acaaggcgtc
     6241 tccttcgccg atttcaagga gcagatccgg gttggcattg tggcccagca ggtagtaggg
     6301 caggaagtcg gcggcaaact gcacattacc aacgaagaag tccaggagtt ttacgacaag
     6361 caccagaagg aactggaagg cccggaagag gtcagcttga gcgagatcat gatctccacc
     6421 cagccaaaga aagagaacgt cgaaaataag gaccagaaag ataagcctgc cgaggacaag
     6481 accctgcccg aggaccccgc gaaggtggcg caggccgaag ccaagg
//
LOCUS       DASQYP010000099         6957 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_194183, whole genome shotgun sequence.
ACCESSION   DASQYP010000099 DASQYP010000000
VERSION     DASQYP010000099.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 6957)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6957)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6957
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_194183"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            234..1136
                     /locus_tag="VE783_03330"
     CDS             234..1136
                     /locus_tag="VE783_03330"
                     /inference="COORDINATES: protein motif:HMM:NF012993.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbon-nitrogen hydrolase"
                     /protein_id="HYX52456.1"
                     /translation="MASNSFTVGLIQMACSPDPDENLRRACERVREAARKGAQVVCLP
                     ELFRTQYFCQREDHSLFDLAEPIPGPTTEALAPIARENKIVIVASVFERRARGLYHNT
                     AVMIETDGSIKGIYRKMHIPDDPLYYEKFYFTPGDLGFKAFETSYGSVGTLVCWDQWY
                     PEGARLTALQGANILFYPTAIGWHPDEKAEYGEAQHDAWKTIQRAHAIANGVFVGAVN
                     RVGHEFGDVRGNRAPGKGLEFWGGSFLCDPFGRVLAEGSHDQEEILIGTCDLKLLEEI
                     RRNWPFLRDRRIESYGGITHRFLD"
     gene            1136..2251
                     /locus_tag="VE783_03335"
     CDS             1136..2251
                     /locus_tag="VE783_03335"
                     /inference="COORDINATES: protein motif:HMM:NF016274.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="agmatine deiminase family protein"
                     /protein_id="HYX52457.1"
                     /translation="MSKPNDKRAKAASQPTPRELGYRMPAEWEPHHSTWLGWPQNRQD
                     WPGKFEPIPWVYAEMVRHLARVEHVDMILRDEATRGRARRILQDAGADLAHVKFHLWP
                     TDRGWTRDSGPIFLVRKSKGEPLATANWRFNAWAKYSNWRHDRLLPQRIGQKLKLPKF
                     VPMVQHNGRPYHVVLEGGSIDVNGRGLMLTTEECLLSRVQQRNPGLKKSELERIFSDY
                     LGVEKVIWLDRGIAGDDTHGHVDDISRFVAPDTILTAVERNRGDSNYAPLQENLRRLR
                     NATDLDGRRFKVIALPLPRPVIFQGQRLPASYANFYIANGLVLVPTFNDPNDRIALNT
                     IAEVLPRHEVVGIHCGDFIWGLGAIHCATQQQPAVRS"
     gene            2352..2879
                     /locus_tag="VE783_03340"
     CDS             2352..2879
                     /locus_tag="VE783_03340"
                     /inference="COORDINATES: protein motif:HMM:NF018925.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1440 domain-containing protein"
                     /protein_id="HYX52458.1"
                     /translation="MEKSASADPNIWKGAAAGLIAGLVASWTMNQVYGLWSKLQQDEP
                     QPEQSSKKGENTDPATLVMARKISRSLFHREIPDDKIRLAEGLTHYGFGTLMGGVYGA
                     LSEQYPKVRAGFGSAFATGLFVVADEISVPAAGLSGKPQAVPFSSHLLGFTSHMAYGW
                     SLEALRRGARRLIAA"
     gene            complement(2957..4291)
                     /locus_tag="VE783_03345"
     CDS             complement(2957..4291)
                     /locus_tag="VE783_03345"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52459.1"
                     /translation="MNKKLLMAMMLASGMAFAQAGGGAGAGAGSSAGQAGSTSPAGSA
                     SSPTGTQSTGAANGAQVDTTTQGNASATSAGSQNSMTGCLRQSGGNWTLASDNGQTVN
                     LSGDNSNLKQYDGQQVSIQGSQASDGSFQVSSVNKISDSCTSQSSSGSMGASGTSATT
                     TSPTAGLTGSTNSMGNQSSTTNTQSTTTTTTTPPDTNSGAAATGTTGSTSTTTPPVSS
                     QTSPSSVGSGSTSATGATGTAGSSADQSTQGQQNSANPSTSGPSGANPPGGGSTNPPD
                     NSSASSTSSTSSTADQSATSQSATSPSSTTSSADQSATSPSASSSTTSASSTTSADQS
                     AAGSTSAPATSNDQSATSTQGSTASQSTPSSSATTSPSSTDQSATTSSSDQSSAGQSA
                     NSTSSDQSAATASDQNSSKGAGKLPQTASPLPLLGLLGLGSLVSGLVARNKK"
     gene            4483..4977
                     /gene="tadA"
                     /locus_tag="VE783_03350"
     CDS             4483..4977
                     /gene="tadA"
                     /locus_tag="VE783_03350"
                     /EC_number="3.5.4.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012536323.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008251 - tRNA-specific adenosine
                     deaminase activity [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0002100 - tRNA wobble adenosine to inosine
                     editing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA adenosine(34) deaminase TadA"
                     /protein_id="HYX52460.1"
                     /translation="MCRNTDSKLLLDDASWMALAVEEARAAAREGEVPVGAVVIKDGQ
                     VVGRGHNRNLQHNDPTAHAEVLAMRDAAMKLGNHRLLGCTLYATIEPCAMCAGAMVHA
                     RLVRLVFGAFDPKAGAAGSVLEVLNHPRLNHKLEITPGVLAEECSALLKRFFAEKRGT
                     AAES"
     gene            complement(4995..5741)
                     /locus_tag="VE783_03355"
     CDS             complement(4995..5741)
                     /locus_tag="VE783_03355"
                     /inference="COORDINATES: protein motif:HMM:NF024258.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042578 - phosphoric ester hydrolase
                     activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase family protein"
                     /protein_id="HYX52461.1"
                     /translation="MKIAIVSDVHGNLTALEAVVADLKQQSPDLVLHGGDLVFGGANP
                     AEVVDAIAAEGWPGVLGNTDEMLWKPELLESRIAAAPKLEPMLRVFFTEMAPVTTKWL
                     GEGRMQWLRKLPLEYRQRDMVLLHAGPGDLWKSPMDDADDESLRATYGSMDAKLVVYC
                     HIHRPFVRRVGEMTVCNCGSVGAPYDGDPRASYLLINGDLPSIRRIQYDLKKETERLS
                     RSGYPFNKWIDEMRRQGVYVPLPQMTPAQN"
     gene            complement(5755..6765)
                     /locus_tag="VE783_03360"
     CDS             complement(5755..6765)
                     /locus_tag="VE783_03360"
                     /inference="COORDINATES: protein motif:HMM:NF024869.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="XdhC family protein"
                     /protein_id="HYX52462.1"
                     /translation="MFHEFMEKSTELLARGERFAVATVVRCQAPSSGKPGDKGIILAD
                     GSLWGWIGGGCAQPAVVKEGLKALADGRPRLVRISPSAGDAGEGVVDYSMTCHSGGEL
                     DIYIEPVLPLPHVVIVGRSPVAQALAQLAGTIGYRVEVVADEVSAENFGSAQVHRDSD
                     FKLSGLRITPQTFVVVSTQGHGDEEALEQAAQSEARYVAFVASKTKSAKVFDYLESRG
                     AAQTKLDRIKAPAGLNINAATPQEIAVSILAEIVQVRGSGMQSVPQPKTAVPAQAQHA
                     SPMLTVLNTEALDPICKMTVDTTKAKHKSEYHGKWFYFCCAGCKQKFEAQPEQYVATS
                     AR"
BASE COUNT         1412 a         2091 c         1954 g         1500 t
ORIGIN      
        1 cgcaccagtt cgcttacgtt ctttaccttg gaaagatcga gcgggaaaac cggtgaaagt
       61 ttgtcgctta caggatcatg aagcttgcgg tcaatgccgg agccctggtg cttctgcttg
      121 gccaattcct cacctcaata aactttagtc gcgaagaaaa aaactaattg ctgcagccgc
      181 gaacgtcaaa cgcgggggct gtgaattctt ttgttttgtt attcttttag gcgatggcaa
      241 gtaattcgtt caccgttggt ctaatccaga tggcctgctc gcccgacccg gacgagaacc
      301 tgcgccgcgc ctgcgaaaga gtccgcgaag ccgcaaggaa aggcgcccag gtcgtctgcc
      361 tcccggagct ttttcgaaca cagtacttct gccagcggga agaccactcg ttgttcgacc
      421 ttgctgagcc aatccccggt cccaccactg aagcgcttgc cccgattgca cgcgagaaca
      481 aaattgtgat cgtagcctcc gtgtttgaac gccgggcgcg cgggctctat cacaataccg
      541 ccgtaatgat cgaaaccgat gggagcatca aaggtatcta ccgcaagatg cacatcccag
      601 acgatcccct ctactacgaa aagttctact tcacgcccgg cgacctcggc ttcaaggcgt
      661 ttgaaaccag ctacggcagt gtgggcacgc tcgtctgctg ggaccagtgg tatcccgaag
      721 gcgcaaggct tacggccttg caaggtgcca atattctttt ttacccaacc gccatcggct
      781 ggcatccaga cgaaaaagcc gagtacggcg aagcccagca tgatgcgtgg aagaccatcc
      841 agcgcgctca cgcaatcgcc aacggcgtct ttgtgggcgc ggtcaaccgg gtaggtcacg
      901 aattcggtga cgtgcgcggc aatcgcgcac ccggcaaagg gctggagttc tggggaggat
      961 cgttcctgtg tgacccgttc ggacgcgtgc tggccgaagg ctcacatgat caagaagaga
     1021 ttctcatcgg cacgtgcgac ctcaagttgc ttgaagagat ccgtcgcaac tggccctttc
     1081 tccgcgaccg tcgtattgaa agctacggcg gaataacaca ccggttcctc gactgatgtc
     1141 gaagcccaat gacaagcgag ctaaagcagc ttcgcaaccc actccgcgcg aacttggcta
     1201 tcgcatgccc gcagaatggg agccgcacca ctccacctgg ctgggctggc cacagaatcg
     1261 ccaagactgg ccgggcaagt tcgaacccat tccctgggtg tacgccgaaa tggttcggca
     1321 tctggcccgc gtggaacacg tagacatgat tctccgcgat gaggcgacgc gcggccgggc
     1381 acggagaatc cttcaggacg caggcgcaga tttggcccac gtgaagtttc acctctggcc
     1441 caccgatcgc ggatggaccc gcgattccgg acctatcttc ctggtgcgca aatctaaagg
     1501 tgaaccgctg gcgacggcga attggcgatt taacgcctgg gccaagtatt ccaattggag
     1561 acatgaccga cttctgcccc aacgaatcgg gcagaaactc aagctgccca aattcgttcc
     1621 catggttcag cacaacggca ggccttacca cgtagtgctg gaaggcggca gcattgatgt
     1681 caacggccgc ggcctgatgc tcaccacgga agaatgtctg ctcagccgcg tacagcaacg
     1741 caatcccggc ctcaagaaaa gtgagctgga gagaatcttt tctgattatc tgggtgttga
     1801 aaaagtgatt tggctggacc gcggcatcgc cggcgacgat acccacggcc atgtggatga
     1861 catctctcga tttgttgctc cggatactat cctgacggca gtagaacgca atcggggaga
     1921 ttctaactac gctccgctgc aggagaacct gcggcgccta cgcaacgcta cagatctgga
     1981 tggccgtaga tttaaagtga ttgcacttcc cctgccccga ccggttatct tccagggcca
     2041 gcgacttcct gccagctatg ccaacttcta tattgcgaat gggctggttc tggttccgac
     2101 tttcaacgat cccaacgacc gtatcgctct gaacaccatc gctgaggtct tgccccgcca
     2161 cgaggttgtc gggatccatt gtggcgactt tatatggggg ctcggcgcta ttcactgcgc
     2221 aacccagcag cagccagccg ttcggtcctg attcgggcga tcccaccacc tgccgcgctg
     2281 gacgatggtg attcgcggtt ggcctcctca aacggttcga cggcttctca agggatcagg
     2341 agaggaaacg catggaaaag tctgcatctg ctgacccgaa tatctggaaa ggagctgccg
     2401 ccggcctgat tgccggcctt gtggcttcct ggacgatgaa tcaggtctat gggctctgga
     2461 gcaagcttca acaagatgag ccgcagccgg aacaatcctc gaagaagggg gaaaacacgg
     2521 atccagccac gctggtgatg gccaggaaaa tttcgcggtc gctctttcac cgcgagattc
     2581 cggatgacaa gatcagactt gcggaagggc tgacacacta cggtttcggc acgttgatgg
     2641 gcggagtcta cggagcgctt tcagaacagt accccaaggt acgtgccggc tttgggagcg
     2701 ccttcgccac tggtctgttc gttgtggcag atgaaatttc cgtccccgct gccggtctga
     2761 gcggaaagcc tcaggcggtc ccgttttcga gtcaccttct gggatttaca tcacacatgg
     2821 cctacggctg gagcttggag gcgctgcgcc gcggggcccg acggctcata gcagcctgag
     2881 cttctgtcca aaaaagcaac tgcccggaag gttctcttcc gggcagttgc ttgttccgcc
     2941 agattgctcg cagtgcttac tttttgttgc gagcgaccaa accggaaacc agtgagccga
     3001 ggcccaacag tcccaggagc gggagcggag aagcggtttg cggcagcttt cctgcgcctt
     3061 tgctgctgtt ctgatcagaa gcagtcgctg cgctctgatc gctggaagtt gaatttgcgc
     3121 tctggccagc ggagctctga tcgctgctgc tggtggtagc gctctggtcg gtggacgatg
     3181 gtgaagtcgt tgcgctggaa ctcggagtgc tctgacttgc agtagagccc tgcgtcgagg
     3241 tcgcgctctg atcgttggag gtagcaggag cgctggtgct tccggcagcg ctctggtcgg
     3301 ccgaagtcgt ggagctcgcg ctggtagtgc tgctgctcgc gcttgggctg gtggcggact
     3361 gatcagcaga agaggttgtg ctgctgggag aagtcgcgct ctggctcgtc gcactctggt
     3421 cggcagtgct gctcgtcgaa gaagtgctgg acgcgctgct gttgtccgga ggattggtgc
     3481 tgccgccgcc cggaggattg gctcccgaag gaccgctggt agacggatta gccgaattct
     3541 gctgtccctg cgtgctctgg tcagccgaag aacccgctgt gccggtagcg cccgtcgcgg
     3601 aagtgctgcc gctgcctact gagctcggcg aagtctggct gctcaccgga ggcgtagtgg
     3661 tagacgtcga accggtggtg ccagttgctg ccgcgccact gttggtatca ggaggcgtcg
     3721 tggtagtggt ggtagtgctc tgggtgttgg tcgtgctgga ctggttaccc atgctgttgg
     3781 tggaaccggt caagccggca gttgggctgg tggtggttgc tgaagtacca cttgcgccca
     3841 tgctgccaga agaagactgg ctggtgcagg aatcagaaat cttgttgacc gagctcacct
     3901 ggaacgagcc atcgctcgcc tggctgccct ggattgaaac ctgctggccg tcatattgct
     3961 tcaggttgga attgtcaccg ctgaggttta ccgtctggcc gttgtcggaa gccagagtcc
     4021 agttgccgcc agactgccgg aggcagcccg tcattgagtt ctgagaaccc gcgctggtgg
     4081 cgcttgcatt gccctgagtg gtggtgtcaa cctgcgcgcc attggcggca ccggtactct
     4141 gtgtgcctgt tggtgacgac gcactgccag cgggactcgt ggatcccgcc tggcccgctg
     4201 aactgccagc gccagctccc gcaccgccgc ccgcctgggc aaaggccatg ccggatgcca
     4261 gcatcattgc cattagcaat ttcttgttca tgtcttagtt gctccttcga agttcactgc
     4321 ccgtttagct gattggtttc tccgccttca gctacgagtc ttgagactgt cccccattta
     4381 gagaagagtt actagtagga ggttgaccgt agtaggggat taaagcaaag ctgctgctga
     4441 tagaatcttt tgtgcaactt tacaggcaac ccgccagcga ccatgtgcag aaacactgat
     4501 tccaagctgc tgctggacga tgcgtcctgg atggcgctcg ccgtggagga agcacgcgcc
     4561 gctgcccgcg aaggagaagt acctgttggc gcagtagtaa tcaaagatgg ccaagtcgtc
     4621 ggccgcggcc acaatcgcaa tctgcagcat aacgatccca ccgctcacgc tgaagtgctt
     4681 gccatgcgcg acgccgcaat gaagctgggt aaccatcgcc tgctcggctg tactctctac
     4741 gcgaccattg aaccttgtgc aatgtgcgcc ggagccatgg tgcatgcccg gctcgtgcgc
     4801 cttgtattcg gcgcattcga ccccaaagcc ggcgcagcag gctcagtgct ggaagttctg
     4861 aatcatcccc ggctgaacca taagctggaa attactccgg gtgtgcttgc agaagagtgc
     4921 tcggcactgc tgaagcgctt ctttgcagaa aaaagaggga ccgccgcgga aagctgattc
     4981 ctccatggca ccaatcagtt ttgcgctggt gtcatttgtg gcagaggcac ataaacgcct
     5041 tgccggcgca tctcatctat ccatttatta aacgggtaac ccgacctgct aagccgctca
     5101 gtctcctttt tcagatcata ttgaatccgc ctgatgctcg gcagatcacc gttaataaga
     5161 aggtacgagg cgcgcggatc tccgtcatac ggcgcaccca cactcccaca gttgcatact
     5221 gtcatctccc cgactctgcg cacaaatgga cgatgaatgt gacagtaaac caccaacttt
     5281 gcgtccatgg aaccatacgt cgcccgcaaa ctctcatcgt ctgcatcatc catcggcgac
     5341 ttccacagat cacccggccc ggcatgcagc agaaccatgt ccctctgccg gtattcgaga
     5401 ggcagcttcc tcagccactg cattcgacct tctcccagcc acttggtcgt aacgggtgcc
     5461 atctctgtga agaatactcg caacatcggc tccagcttcg gcgctgcggc aatcctgctt
     5521 tcgagtagtt cgggcttcca cagcatctcg tcagtgttgc ccaggactcc cggccagccc
     5581 tcggcggcaa tcgcatccac aacctcagca ggattggctc ctccaaacac caagtcacca
     5641 ccgtgcagaa ccaaatccgg cgactgctgc ttcaaatcgg cgactacagc ctcaagcgcc
     5701 gtgaggtttc cgtgaacgtc agagacgatc gcgattttca tggaatctac gcgcctaacg
     5761 cgctgaagtg gccacatact gttccggctg agcttcaaac ttctgtttgc atcccgcaca
     5821 acagaagtag aaccacttac cgtgatactc agatttatgc tttgccttgg tggtgtccac
     5881 ggtcattttg cagatcggat cgagggcctc ggtattgaga actgtgagca ttggcgaagc
     5941 atgttgagcc tgcgcgggaa cggctgtctt gggttgcggc accgactgca tgccactccc
     6001 ccgcacctgc actatctccg ccagaatgct tacggcgatc tcctgcggcg tggccgcatt
     6061 gatattcagt ccagcgggcg ctttgatgcg gtctaacttt gtctgagcgg cacctcgcga
     6121 ctccaagtag tcaaatactt ttgcactctt cgtcttgctc gcgacgaacg ccacataccg
     6181 agcttccgat tgcgctgcct gctccagcgc ttcttcatcg ccgtggccct gcgtagatac
     6241 cacgacaaaa gtttgcggtg tgatcctcaa tccgctcagc ttgaaatcag aatcccggtg
     6301 gacttgagca cttccgaagt tctccgcact cacctcatcc gcaaccactt caaccctgta
     6361 cccaatcgtt cctgccaatt gagcaagtgc ctgcgccacg ggcgatcgcc caacaataac
     6421 gacatgcggc agcggcagca ccggctcaat atagatatcg agttccccgc cgctgtggca
     6481 cgtcatactg taatccacca cgccctctcc tgcgtcgcct gccgagggac taatcctcac
     6541 cagccgcgga cgcccatccg ccagcgcctt caaaccttct ttcaccaccg ccggctgcgc
     6601 gcagccaccg ccgatccagc cccagagact gccatcggcg aggatgatac ccttatctcc
     6661 cggcttgccc gaagacgggg cctggcagcg caccaccgta gccacagcga accgctcccc
     6721 gcgggccagc aattccgtcg atttttccat gaactcgtga aacatgttca ttgcctccgg
     6781 catttcccca ttctagtggc gcgccagatg cccctccagt tgcagaagac tctccagatt
     6841 atgcgccggc gcaaacacat ccacatgcgg cagcgcggca ctcatgccgc gcgtgattgg
     6901 ctcgtactcc tgcatcccca gcaacggatt gagccatacc agtttgcgaa ctcgccg
//
LOCUS       DASQYP010000100         6150 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_194247, whole genome shotgun sequence.
ACCESSION   DASQYP010000100 DASQYP010000000
VERSION     DASQYP010000100.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 6150)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6150)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6150
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_194247"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2403
                     /locus_tag="VE783_03365"
     CDS             <1..2403
                     /locus_tag="VE783_03365"
                     /inference="COORDINATES: protein motif:HMM:TIGR03434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HYX52463.1"
                     /translation="NAAVLREHANAAWGWLERLVQDLRFGARMLWRAPGVTITAIAIL
                     ALGIGVNVTAFNIVDLIFFRPLSIRDPHSLVHMTTIFPQGSSSNVAYPAVLYYRDHSG
                     ALASVIAVQRTQMTLSEAQPQSARIGLVTANYFSDLGISALYGRVFGSDDGAASAPAT
                     AVLGHGFFQSHFGSDATVVGRTIRINQRPVTVVGVLPAGFVGLDPEGAESDDVWLPFE
                     QITYFVPDSKFPASFDQMESGVHMYGRLRPGFKLETAQQALLPLAQQLSQDHPDHLLK
                     GEHLRLSPGGYAAEFSAEDVPAFGLLAALTFLILAATCGNLGNLLLGRAATRQREIGI
                     RLSLGATRGRILRQLMTESLLLGVFGSAAALLMSWYASRLIVSMTGTALSFDLVPDWR
                     TTLFAVAIGILACVLFGLPSARQLSRQRQKSSRVRGLFIAAQVTASCVLLVISALLVH
                     ALKRAVSVNPGFDYSQVAVLDPQLYAHSYSDSAAADFYRALKERLLRNSGVESATVVR
                     LQPLGNDISIQRGKSGADGSRFDIYLNEVDGDFFQTMAIPLLRGRTFRPGESDAAIVS
                     ESSARRLWPGKDPLQQPYKLGKKTYTVVGVAGNANTISLHDGNAGQAYTPLEEATLTK
                     TFVLARSSRRPEDLAMLLTQTARSIDGQLSPVAHTLKGSFNDKVGDTAQVAGVIGAMG
                     VLALLLATIGLYGVVSYNVAQRTKEIGIRIALGATPGSIVRAVLTNLTAPLAGAIALG
                     LIVAAALSFIMRSYLYGVHNLDPVSYVGSMAVLLGVAALAAFMPARRALKVDPMIALR
                     CE"
     gene            2429..3022
                     /locus_tag="VE783_03370"
     CDS             2429..3022
                     /locus_tag="VE783_03370"
                     /inference="COORDINATES: protein motif:HMM:NF028004.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome P460 family protein"
                     /protein_id="HYX52464.1"
                     /translation="MKRTLIAIGVFIMIAIAVAWTGKSAKADTQAATNANLPVYSADG
                     KLALPANYRDWVFLTSGLGMNYSNAGGGRQMFTNVFVTPEAHKAFLTTGKWPDKSMFV
                     VEIYSPATEGSINKSGFYQDELRGLDVEVKDSSRPEEWSYYAYSPGQNAAPALGGGCT
                     KCHNENGAVEHTFVQFYPTLLPLAKAKNVLKPGVRIR"
     gene            3059..3769
                     /gene="pyrH"
                     /locus_tag="VE783_03375"
     CDS             3059..3769
                     /gene="pyrH"
                     /locus_tag="VE783_03375"
                     /EC_number="2.7.4.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005328724.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0033862 - UMP kinase activity [Evidence
                     IEA];
                     GO_process: GO:0015949 - nucleobase-containing small
                     molecule interconversion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UMP kinase"
                     /protein_id="HYX52465.1"
                     /translation="MPAYKRILLKLSGEALAGDKGFGVETTRIHAIAGEIREVHELGV
                     EIALVVGGGNFFRGVAEQARDMDRVSADHMGMLATVINSLALQDALEKQGVFTRVMSA
                     LEMNQIAEPFIRRRALRHLEKGRVVIFAGGTGNPYFSTDTAASLRAMEIKADVIMKAT
                     RVNGIYDADPRLVTDAKMFDSISYLDFLKRGLRVMDATAISLCQENKMPIVVFNLTVA
                     GNIKRVVTGEKVGSLVSV"
     gene            complement(3771..3929)
                     /locus_tag="VE783_03380"
     CDS             complement(3771..3929)
                     /locus_tag="VE783_03380"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52466.1"
                     /translation="MILKIALLLWFVAFALALFTTGKVRSLMGRLFVAGFCLLILGMF
                     LKIISRVL"
     gene            complement(3984..5468)
                     /locus_tag="VE783_03385"
     CDS             complement(3984..5468)
                     /locus_tag="VE783_03385"
                     /inference="COORDINATES: protein motif:HMM:NF026220.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YCF48-related protein"
                     /protein_id="HYX52467.1"
                     /translation="MPEFSTIVRQRLQAGEERKGLHPDADTLTAYVEQLLPGHERDHV
                     ARHLSLCAECRDVVTLTMPEVTAAAEVQEVAIPAAQAEPAVVPMPAPPRRSWFLTPAF
                     GMAASIAAMALGLVLVLRLDHGTQVATIQHATQNTEARNSVPAATEDKVTVPEQPASR
                     PGEPAASFAPSAPPPPNASVQPAPSASIAANRADIAPNTTRAVASKPKIAAGLTGSAN
                     RPTAVADLRQDYLNSQLIFANAGANEARSGQELPQAPQPVFSTNLRAPSLLGGSTVPP
                     QNNAYLQIPSNTGQSTLSFYPTPQQQGSSVLDKIVDAGKLPLRAKKLVPPIRARETDR
                     LSMFSPGLGLADSSQASAMAKAPDNTDSKSELAQSQAFTRRALTPAAVARLDEPMVQW
                     KVAQGKLLKSTDLSSWVEAYPSSDGIQFTVVSGNGAEIWAGGNKAALVHSRDAGATWD
                     KVRMGVAANGDIMAIEGGGLTLQVKTSTGQTWVTSDGGASWTLR"
     gene            complement(5471..>6150)
                     /locus_tag="VE783_03390"
     CDS             complement(5471..>6150)
                     /locus_tag="VE783_03390"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HYX52468.1"
                     /translation="GCANGHEYAWQVFLTRYREKLYGIARGITREDSSARELADSIYG
                     DLFGTSEREGNRLSRLSFYMGRGSLEGWLRTVVAQEFVNRYRKQKRLVSLDEQEEDGV
                     QFTASDPGPSSAIDGRLSSAVDDALGSLSSEDRMILASYYLDDRTLTEIGRLVGVHES
                     TISRRLEKLLKGLRKQVIHGLTARGLNRSQAEEMLESDVRYLQVDVGKKLQENLPAAF
                     HRDKGTN"
BASE COUNT         1185 a         1777 c         1874 g         1314 t
ORIGIN      
        1 aatgccgcgg tgctgcgcga gcatgccaac gctgcctggg gatggctgga gcgtctggtt
       61 caggacctgc gcttcggtgc ccgcatgctg tggcgcgcgc cgggagtcac cattaccgcg
      121 attgcgattc tggcactcgg aatcggtgtg aatgtgacgg cgtttaacat tgtggacctg
      181 atcttctttc gtccgctgtc gatccgtgat ccacattccc tggtgcacat gaccacgatc
      241 ttcccccagg gctcgtcatc gaatgtggct tatccggcgg tgctctatta ccgcgatcac
      301 agcggcgcgc tggcttcggt gatcgcagta caaaggacac agatgactct gagcgaggct
      361 cagccacaga gcgcacgcat tggactggtc acagcgaact atttcagcga tctgggaatt
      421 tccgccctct acgggcgggt tttcggcagt gatgacggcg ctgcttctgc gcctgcaact
      481 gctgttttgg ggcacggctt ctttcagagc cacttcggat cggacgccac agtggtagga
      541 agaaccatcc gcatcaacca gcgccccgtt accgttgttg gcgtgctgcc ggccgggttt
      601 gtcgggctcg atcccgaagg cgccgagtcg gacgatgtgt ggctgccctt cgagcagatc
      661 acgtattttg tccctgacag caaattcccg gcgagtttcg atcagatgga atcgggcgtt
      721 cacatgtatg gccgcctgcg accgggtttc aagcttgaaa cggcgcaaca ggcgctgctt
      781 ccgctggcgc aacagttgag ccaagaccat cccgaccacc tgctcaaggg tgagcacctg
      841 cgcctgagcc cgggaggata tgctgctgag tttagtgcgg aagatgttcc cgctttcggc
      901 ctgctcgccg ccctgacgtt tctgattttg gcggcgacct gcggcaatct ggggaatctc
      961 ctgctcggtc gcgccgctac gagacagcgc gagattggta tccggctttc gctgggcgca
     1021 acgcgcggcc gcatccttcg gcagcttatg accgagagcc tgctgctggg agtgttcggt
     1081 tccgcggctg cgctgctgat gagttggtac gccagccgtt tgatcgtttc catgaccgga
     1141 actgcgctga gctttgatct ggttccggac tggcgcacca cattattcgc ggttgcgatc
     1201 ggcatactgg cctgcgtgct ctttggattg ccttctgccc ggcagctgtc acgtcagcgg
     1261 caaaaaagtt cgcgcgtgcg agggctgttc atcgccgccc aggtcaccgc gagctgcgtg
     1321 ctgctggtga tctcggcctt gctggtgcat gcgctgaaac gcgccgtttc cgtgaatccg
     1381 ggattcgatt acagccaggt tgcagtactc gatccccaac tctatgcgca ttcttactcg
     1441 gattcagcag cagcggattt ctatcgagct ttgaaggagc gcctgctcag gaattcaggt
     1501 gtggagagcg cgactgttgt tcgtttgcag ccgctgggga atgacatctc catccagcgc
     1561 ggaaaatccg gtgcggacgg cagccgcttc gatatctatc tgaatgaggt tgatggcgac
     1621 ttcttccaga ccatggcaat cccgctgctg cgcggacgca cattcaggcc gggcgagagc
     1681 gatgctgcca tcgtgagcga gtcctcggca cgacggctgt ggccgggcaa ggacccactc
     1741 cagcagccct ataaacttgg caagaagacc tacacagtgg tcggagttgc tggcaatgcc
     1801 aataccatat cgcttcacga tggcaatgca ggccaggcct atacgccatt ggaggaagcc
     1861 actctgacta agacgtttgt actcgcacgc agctcgcgac gtcctgaaga tctggcaatg
     1921 ttgctgaccc aaaccgcgcg gagcattgac ggccagttga gtccggtggc tcacacgctg
     1981 aaaggcagtt tcaatgacaa ggtcggagac acagcgcagg tcgcaggcgt aatcggcgcc
     2041 atgggagtgc tcgccttgct gctggcgacg atcggtcttt acggggtggt gtcctacaac
     2101 gttgcccagc gcaccaaaga gattgggatc cgcatagctc tgggagcgac cccgggaagc
     2161 atcgttcgcg cggtgcttac gaaccttact gctcctcttg cgggggcaat cgcgctgggg
     2221 ctgatcgttg ccgcagcgct ctccttcatc atgcgcagct atctttacgg cgtgcacaac
     2281 ctcgatccgg tcagctacgt gggatcgatg gcggtgctgc tcggagtagc ggcgctggcc
     2341 gcgtttatgc ctgcacgacg ggccttgaaa gtggatccca tgatcgcctt gcggtgcgaa
     2401 taatgcattt ctatctggag cttggaaaat gaaacgtact cttatcgcca ttggtgtgtt
     2461 cataatgatt gctatcgctg tcgcttggac cggcaagtcg gccaaggcgg acacgcaagc
     2521 tgctaccaac gcaaatctgc cggtttactc cgcagatgga aagctggcgc tcccggcaaa
     2581 ctaccgcgac tgggttttcc tgacctccgg attggggatg aattactcca atgcgggtgg
     2641 cggccgccag atgttcacca atgtgtttgt cactccagaa gcgcataaag catttctcac
     2701 cacgggaaag tggccggaca agagcatgtt tgtggttgag atttactcgc ctgcgacgga
     2761 aggctctatc aacaaatcgg gtttttatca ggatgaactc aggggcctgg acgttgaggt
     2821 gaaggactcc tcgcgtcctg aggaatggag ctattacgct tacagccctg ggcagaacgc
     2881 agcgccggcg ctgggcggcg gctgcacgaa gtgccacaac gagaacggcg ctgtggaaca
     2941 cacatttgtg cagttctatc cgacccttct gccgctggcg aaagcaaaga acgtcctgaa
     3001 acccggggtg cgcatccgct gagtgcgctg gcagcactgc tatactttta ggcagtctat
     3061 gcctgcgtat aagcgcattc ttctcaagct ttccggcgag gccctggccg gcgacaaagg
     3121 tttcggcgtt gaaaccacac gcatccacgc tattgccgga gaaatcaggg aagtgcacga
     3181 gctgggcgta gagatcgcgc tggtcgttgg cggtggcaac ttcttccgcg gggtggctga
     3241 gcaggcccgc gacatggacc gcgtctctgc cgatcacatg ggcatgctgg ccaccgtcat
     3301 caactccctg gcgctccagg atgcgctgga aaaacagggc gtgttcacgc gcgtaatgtc
     3361 cgctttggaa atgaatcaga tcgcggagcc gttcatccgc cggcgcgcac tgcggcacct
     3421 ggagaaggga cgtgtagtga tcttcgcggg tggtaccggc aacccgtact tctcaaccga
     3481 cacggccgcg tctttgcgtg ccatggaaat caaggcggac gtaatcatga aagcgacgcg
     3541 cgtgaatgga atttatgacg cggatccgcg gctggtcacg gacgccaaga tgttcgatag
     3601 catcagctat ctcgattttc tgaagcgtgg cctgcgggtg atggacgcga cggcaatttc
     3661 cctgtgccag gaaaacaaga tgccgattgt ggttttcaac ctgacggttg ccggcaacat
     3721 aaagcgcgtg gtcacgggtg agaaggtggg atcgctggta tcggtttaga tcacagcacg
     3781 cgcgaaataa tcttcagaaa catccccaga atcagcaggc agaagcccgc cacgaacaag
     3841 cggcccatga gactgcgtac cttgcccgtg gtgaaaaggg ccagggcaaa ggctacaaac
     3901 caaagcagaa gtgcaatttt caggatcact gccgcggatt atacaacggg aaatttgcgc
     3961 agcagattaa gaccggaagc gttttagcgt agagtccagc ttgcgccgcc gtcgctggtc
     4021 acccaggttt ggccggtgga ggtctttacc tgcaacgtga gccccccgcc ttctatggcc
     4081 ataatgtcac cgttggcagc cacacccatg cgaaccttgt cccaggtggc gccggcatcg
     4141 cgagagtgca caagggcagc tttgttgccc ccagcccaga tttccgcgcc attaccgctg
     4201 accacggtga actgtatgcc atcggaactc gggtaggcct ccacccaact gctaagatcg
     4261 gtggatttca gcagcttgcc ctgggccacc ttccactgga ccatcggttc atccaggcga
     4321 gctacagctg cgggcgtgag cgcgcggcga gtgaaggctt gcgactgcgc caattcactc
     4381 tttgaatcag tgttgtcagg ggctttggcc atcgcactag cttggctgct gtccgccagg
     4441 cccagcccgg ggctgaacat gctcaggcga tcggtctccc gggcgcgaat cggcggcacc
     4501 agcttcttgg cccgcaacgg cagcttgcct gcatccacaa tcttgtccag cacactgctg
     4561 ccctgctgct gcggagtcgg ataaaaactc agggtgcttt ggccggtatt cgagggtatc
     4621 tgcaggtagg cattgttctg aggcggcacg gttgaacccc ccagcaatga cggggcacgc
     4681 agattcgtgg aaaacaccgg ctgaggggcc tggggaagtt cctgcccgga gcgcgcctca
     4741 ttggcaccgg cattggcaaa aatcaactgg ctgttgagat agtcctggcg gagatcagcc
     4801 actgcggtgg gccgattcgc agagccggtt aacccagccg cgattttggg cttggaagca
     4861 actgctcgcg tcgtgttcgg cgcgatgtct gcccgattag cggcgattga agctgacggt
     4921 gcaggctgaa cggaggcgtt gggcggaggc ggagctgaag gtgcaaacga ggcagcaggc
     4981 tcgccgggcc tgctggccgg ctgttcaggg acggttactt tatcttcggt cgcagccgga
     5041 actgagtttc tcgcctcagt gttctgggtt gcgtgctgaa ttgtggccac ctgagtgccg
     5101 tgatccaatc tgagaaccag caccaagcca agcgccatgg cagcgatgga ggctgccatc
     5161 ccaaatgccg gggtcaaaaa ccagctgcgc cgcggcggtg caggcatcgg aaccactgcc
     5221 ggctcggcct gggctgccgg gattgcaact tcctgcacct cggctgcggc cgtgacttcc
     5281 ggcatggtca atgtgaccac atcgcggcac tccgcgcaca gggagagatg gcgggccacg
     5341 tgatcgcgtt catggccggg aagcaactgc tccacgtaag ccgtaagggt gtcggcgtcc
     5401 gggtggagtc ctttgcgttc ttctccggcc tgtagccgct ggcgtacgat ggttgaaaac
     5461 tcaggcattg ctagtttgta cccttatcac gatggaacgc tgcagggaga ttttcttgca
     5521 gttttttgcc cacgtctacc tgcaaatagc gtacatcaga ttccagcatt tcttcggcct
     5581 ggctgcggtt cagcccgcgt gccgtcagac cgtgtataac ctgctttcgc agccctttca
     5641 agagcttttc cagccgccgg ctgatggtgg attcatgcac tccaaccagc cttccaattt
     5701 ctgtaagcgt ccggtcgtcc agatagtagg acgccaaaat catgcgatct tcagaactta
     5761 agcttcccag agcgtcgtct accgcggaac tcaggcggcc atcaatcgcg ctgcttgggc
     5821 ccggatcgga ggctgtgaac tgcaccccat cttcctcctg ttcatccagg ctgaccaggc
     5881 gcttctgctt gcggtagcga ttcacgaatt cctgcgccac taccgtgcgc agccagcctt
     5941 ccagggagcc ccgccccatg taaaagctca ggcgggaaag ccggttccct tcgcgctcag
     6001 aggtcccgaa caggtcgccg tagatggagt cggcgagttc gcgtgcgctt gagtcctcgc
     6061 gggtgattcc ccgcgcaatg ccataaagct tttcgcgata gcgggtgagg aagacctgcc
     6121 aggcgtactc atggccgttg gcgcaaccgc
//
LOCUS       DASQYP010000101         2760 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_175250, whole genome shotgun sequence.
ACCESSION   DASQYP010000101 DASQYP010000000
VERSION     DASQYP010000101.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 2760)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2760)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2760
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_175250"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2084
                     /locus_tag="VE783_03395"
     CDS             <1..2084
                     /locus_tag="VE783_03395"
                     /inference="COORDINATES: protein motif:HMM:NF015168.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="thioredoxin domain-containing protein"
                     /protein_id="HYX52469.1"
                     /translation="EPFEKAKQQNKPVLLDIGAVWCHWCHVMDRESYEDPELAALINQ
                     HFIAIKVDRDERPDVDSRYQVAVQAISGQGGWPLTAFLTPEGKPFYAGTYFPPQDYQG
                     RPSFRRVLMTLAQAFHEKNADVLESAESVMAAISQSEAFAGKSGSLRALTVNTMVDAA
                     VRLFDGEHGGFGSAPKFPHPSAMDLLMQRCAEPGDELLRHIVSTSLQKMAEGGVYDQL
                     AGGFHRYSVDEHWIVPHFEKMSYDNSELLKNYVHAYQLTGNEFFAMVARDIIRWMDEW
                     LSDREHGGFYASQDADVTLDDDGDYFTWTLDEAEAVLSDDELQAAMLHYDIGEVGEMH
                     HNPAKNVLYVRVPIDEIATRMKKTPQEVEALLRSAKEKMYAARLKRPTPFIDKTVYVS
                     WNALCISAYLQAAQVLNLQGLNLEDARKFALRSLDRILSKGWNPETGLQHVIAYSDSQ
                     AANKSVSGVLDDYAFMVIACLDAYEASGDLTYYEFARKIADLMIARFEDKDEGGFVDI
                     PAGDAAALGALAAKRKPLQDSPTPAGNPAAAIGLIRLHAYSNHAPYLESAERTLEAFA
                     GIAEHYGLFAATYGIALDMFLHPHTQVVIAGSGEAAEKLKAAAVAPLSLYKSVVHLRE
                     GEVVPQMLPPAFAETVPNIPGIKEKKVMAVLCTNFSCQPPITDADELKRAILNISSDA
                     KERDIHEKQRA"
     gene            complement(2128..>2760)
                     /locus_tag="VE783_03400"
     CDS             complement(2128..>2760)
                     /locus_tag="VE783_03400"
                     /inference="COORDINATES: protein motif:HMM:NF014774.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(Fe-S)-binding protein"
                     /protein_id="HYX52470.1"
                     /translation="IEVHIPAGQGCCGALHSHAGYRDEARELARHNIKIFLSGDYDAI
                     VTNAAGCGSNMKEYDDLLENDPEFLDRAKQFSKKTKDVTEYLASIGLRSPKKKISQKV
                     AYQDACHLGNAQRIKNQPRELLAAIGAQVVELPHPDQCCGSAGVYNVTQNELSMRILE
                     AKLDDVQSVEFDTLATANVGCMIQLRAGTEQRGMNKPIKHVMELLEEAYS"
BASE COUNT          554 a          775 c          852 g          579 t
ORIGIN      
        1 cggaaccctt tgaaaaggcg aagcagcaga acaagccggt gctgctggat atcggcgctg
       61 tgtggtgcca ctggtgccac gtgatggacc gcgaatcgta cgaggatccg gagctggcgg
      121 cgctgatcaa ccagcatttc atcgccatca aggttgatcg cgatgaacgt cctgacgtcg
      181 acagccgcta tcaggtggcg gtgcaggcca tcagcggcca gggcggctgg ccgctcacgg
      241 cattccttac tccagaagga aagccctttt acgccgggac atactttccg ccgcaggatt
      301 accaggggcg cccgagcttt cgtcgcgtgc tcatgactct ggcgcaggct ttccatgaga
      361 aaaacgctga cgtcctggag tccgccgaga gcgtgatggc tgccatcagc cagtcggaag
      421 ctttcgcggg aaagtctggt tcgctgcgcg cgctcactgt aaacaccatg gtggacgccg
      481 cggtaaggct gttcgacggc gagcacggcg gcttcggctc ggctcccaag tttccccacc
      541 ccagcgcaat ggacctgctc atgcagcgct gcgccgagcc cggcgatgag ctgttgcggc
      601 acatcgtctc cacgtcgctg cagaagatgg ctgaaggcgg cgtctacgat cagcttgccg
      661 gaggcttcca tcgttattcc gtcgacgagc actggattgt cccccacttc gaaaaaatgt
      721 cctatgacaa ctcggagctg ctgaagaact atgtgcatgc gtaccagctc accggaaatg
      781 agtttttcgc catggtggcg cgtgacatca tccgctggat ggacgaatgg ctgagcgacc
      841 gcgagcatgg cggcttctat gcctcgcagg acgcggacgt tactctggac gatgacggcg
      901 actactttac atggactctg gacgaagcag aggccgtgct gagcgacgac gagttgcagg
      961 ccgccatgct gcactatgac attggcgaag tcggcgagat gcaccacaac ccggcgaaga
     1021 atgtgctcta tgtgcgcgtg cccatcgatg agattgccac acgcatgaag aagacgccgc
     1081 aggaagtgga ggcgctgctg cgctcggcca aagagaaaat gtatgcggcg cggctgaagc
     1141 ggcctacgcc gttcatcgac aagactgttt atgtgagctg gaacgccttg tgcatttcag
     1201 cgtatctgca ggctgcacag gtgctgaacc tgcaagggtt gaatctggaa gacgcgcgca
     1261 agtttgcctt gcgctcgctc gatcgcattc tttcgaaggg ctggaatccc gaaactggcc
     1321 tgcagcacgt gatcgcctat tccgattcgc aagcagcgaa caaaagcgtt tccggggtgc
     1381 tggatgatta tgccttcatg gtcatcgcct gcctggatgc ctatgaggca agcggcgacc
     1441 tgacctatta cgaatttgcg cgcaagatag cagatctgat gatcgcgcga ttcgaagata
     1501 aagatgaagg cggctttgtg gacattccgg ccggtgatgc agcggcgctc ggcgcgctgg
     1561 cagccaagcg taagccgttg caggattcac ccacgcccgc cggaaatccg gcggcagcta
     1621 ttgggctgat ccggctgcat gcctatagca atcacgcccc ctacctcgaa tcagcggagc
     1681 ggacgttgga ggcgtttgcc ggaatcgcgg agcactacgg actctttgct gcaacttacg
     1741 ggattgccct tgatatgttc ctgcacccac acacgcaggt ggtgatcgcg ggaagcgggg
     1801 aagccgcgga gaagttgaaa gcggccgcgg tggcgccgct ctctctttat aagtcagtgg
     1861 ttcacctgcg cgaaggtgaa gtagtcccac agatgttgcc gccggctttt gctgagacgg
     1921 tcccgaatat ccctggaatc aaagagaaga aggtgatggc ggttttgtgc acgaatttta
     1981 gctgccagcc gccgatcacg gatgcggacg agttgaagag ggctatttta aacatctcga
     2041 gcgacgcgaa agaacgcgat atccacgaga agcagagggc gtagagttgt tgtttatcct
     2101 tgcctgcgct cgggatttca gaaagagcta cgagtaagcc tcctccagca actccatcac
     2161 atgtttgatc ggcttgttca tgccgcgctg ttctgttccg gcgcgaagct ggatcatgca
     2221 gccgacgttg gcggtggcca gcgtgtcgaa ctctacggac tgcacgtcat ccagcttggc
     2281 ttccaggatg cgcatggaga gctcgttctg ggtgacgttg taaaccccgg cgctgccgca
     2341 gcactggtca ggatgcggca gctcgacgac ctgagcgcct atcgcggcca gcagttcacg
     2401 cggctggttc ttgatccgct gcgcattgcc gaggtggcag gcgtcctggt acgcgacctt
     2461 ctggctgatc ttcttcttcg gcgagcggag cccaatcgac gccagatact cggttacgtc
     2521 tttcgtcttc ttcgaaaact gctttgcccg gtccagaaac tcggggtcgt tttccagcag
     2581 gtcgtcatat tccttcatgt tggagccgca gcctgcagcg ttggtcacga tcgcgtcata
     2641 atcgccgctg aggaatattt tgatgttgtg ccgggcgagt tcgcgggcct cgtcgcgata
     2701 accggcgtgc gagtgcagcg ctccgcagca gccctggccg gcagggatgt ggacttcaat
//
LOCUS       DASQYP010000102         2803 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_69756, whole genome shotgun sequence.
ACCESSION   DASQYP010000102 DASQYP010000000
VERSION     DASQYP010000102.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 2803)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2803)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2803
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_69756"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..147)
                     /locus_tag="VE783_03405"
     rRNA            complement(<1..147)
                     /locus_tag="VE783_03405"
                     /product="16S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00177"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00177"
     gene            complement(1513..2733)
                     /locus_tag="VE783_03410"
     CDS             complement(1513..2733)
                     /locus_tag="VE783_03410"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52471.1"
                     /translation="MARLDRVIQACTRVLCCGVVTVLVGCSGGGSTGGGGATPTPTPA
                     AAARLIVSDNSSGTVSIVNATTDGITHTFNVPSPGKMVSAGGVTLIQSTLANSVTIFD
                     NTTETIRFTVPLATVPVDIALTPDGKTGWVALSNGTVETIDTATGAPGPAMTVIGGVQ
                     RLIMGPQGTKVLAFNDALNINFTVVFSPNSPIELGNLALDHPTYGVFESDDNHFLLLN
                     CGKECGGTQAGHSFVNVSPLIGGPAISIPVSVSGATVGLLSGTTDFVAGSPATGLNAG
                     TVQTVNIATDAVGAPVSIADGRHNLMALTANSLFIGATGCTLGAVNAQNLRQGCLTVF
                     DTAALKATPVLIPAGRANGDVTGMAALSNRGVVYVVQGGVLDIVDVSSGAISTTAKAP
                     TFAGTVFGVVQLSP"
BASE COUNT          580 a          886 c          687 g          650 t
ORIGIN      
        1 gttattcccc actcgagggt aggttagtca cgtgttactc acccggtcgc cactttactc
       61 atggattgct ccactttctc gttcgacttg catgtgttag gcacgccgcc agcgttgatt
      121 ctgagccagg atcaaactct catttgaaac ctgattcaac tcccaccctc cgaaaagggc
      181 cagagtcttg acctccagac gggtagtcct ggagatccgc cacgcggcta ataagacgtc
      241 tctcgacgcc cggaattcac cgcgcagcac ttacctattt tgtgagatca ctcggacttg
      301 aatcctcgtt tttctcacga ctggcacgtt caaccaaatt gtcaaagacc gattccgatt
      361 gccgcctgag cggttcgttc tcgatattga ctggccaact catcgctggc ctgtcctcga
      421 aacttgttgt ctcactgcgg cgtcagccac tagagacgaa ccttttaact gtagcgcgac
      481 ttgctgctgc tcgtcaacct ttattcactt tattgttgac tttttcgatt catgcgagca
      541 cttagcactt ggcctttagc acttggcctt tagcacttgg ccaaaccgtt ttgcttcatc
      601 ggctcgccga ttacagcaaa tttgcgcgtg catcgcagcc gccctcggct gcgccctgtt
      661 gcaatcgccg tcgcactccc gcccttccac gcctttgcta aaggccaagg gctaatggct
      721 aacggctacg cagagcgcaa cccgctaccg cctctcctcc caggaagagg ctttttccac
      781 attaattaaa gatcgctttg gaggtctctc aacccttcag gaactcaagg ctcccgaata
      841 ctgccccgca ggtatcacct tgggggccaa atggtggctt cttctttaga tgggctcgaa
      901 tcccaaagga ttcaactttc ctgcccaccc tgccgaactt gctcgttccc gcccggcttc
      961 tgccacttcc cttgcttcga tttcttttat accagccaca ccgctgttca tgcaagtgtc
     1021 cgggatcaca ttccgttaac aaaaatccat gcaccaaagt cagggcaaac cctcggcgaa
     1081 gctgcctgtg ctgttaaacg gtccaggtgc agaacagcat gaatctcaat cgacaactac
     1141 cataacgctt cgtctgcgtc ctccgtcttg aatgggcctc gcgtggctac agtctcacaa
     1201 cctatggtag ttccagcgcg aagcgcggaa gagtgcaagc ccggggcggc agccccggga
     1261 ggaggcgaat taataccttg agcccgcgag gggcggcaca gaatcagctg ctgcccagcg
     1321 tagccgcgaa gcactcatgt tgcttttcag gtttaatccc ctggaggaat accgtaaatg
     1381 cagcaatttc caatttgttg gacacttatc ggcgttcctg ccgcaccctt cctgttcgta
     1441 ccagctgcga cacgctgatt atggaggaat cccgagcaag tcttggccct gcatcagcgg
     1501 tatcgcaatt ttctaaggac tcagctgaac caccccgaag accgttcccg caaacgttgg
     1561 cgccttcgcc gtcgtgctga tggcgccgct cgaaacatcc acaatatcca gcactccgcc
     1621 ctgcaccacg taaaccacac cgcgattgct gagcgctgcc atgccggtca cgtcgccatt
     1681 ggcgcggcct gccgggatca gcaccggcgt ggcctttagt gccgcggtat caaaaactgt
     1741 caggcagccc tgccggagat tttgtgcgtt caccgcgccc agagtgcacc cggtcgcgcc
     1801 tatgaacaga ctgttcgccg tcagtgccat aaggttgtgg cggccatcgg caatgctcac
     1861 cggcgcgccc acagcgtccg ttgcaatatt caccgtctgt actgttcccg catttagccc
     1921 cgtggcaggt gatccggcca caaagtccgt agtcccgctg agcaagccaa ccgtcgctcc
     1981 tgaaacggaa acgggtatcg aaatggccgg ccccccaata agaggagaga cattcacaaa
     2041 ggagtgcccc gcctgagttc caccacactc cttgccacag ttaagcagca aaaaatggtt
     2101 gtcatcgctt tcgaaaactc cgtatgtagg atggtccagg gcaaggttcc ccagttcaat
     2161 cgggctgtta ggggaaaaaa ctaccgtgaa gttaatattc agagcatcat tgaacgccag
     2221 caccttggtt ccctgggggc ccatgatcag gcgctggact cctccaatca ccgtcatcgc
     2281 cggtcccggg gcgcccgtgg cagtatcgat cgtctccacc gtaccgttgc tgagcgccac
     2341 ccaccccgtt ttgccatccg gggtcagcgc gatgtccacc ggcactgtcg ctagcggcac
     2401 ggtaaaccgg atcgtctccg tggtgttgtc gaagatcgtt acggagttgg ccagcgtgct
     2461 ctggatcagg gtcactccgc ccgcgcttac catcttgcct ggcgagggta cgttgaaagt
     2521 atgtgtaata ccgtctgttg ttgcattaac gatgctgacc gtgcctgagc tgttatctga
     2581 aactatcaac ctggccgccg ctgcgggcgt aggcgtgggc gttgctcctc cgccgcctgt
     2641 gctaccgccg cccgaacatc caaccagaac cgtgacaact ccgcagcaaa gcacccttgt
     2701 acatgcctga ataaccctgt ctagccttgc catcgatcct caccccttct tacccagaac
     2761 gaagctattc cggcgccgtg caatcataat tcattgggca att
//
LOCUS       DASQYP010000103         5048 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_175418, whole genome shotgun sequence.
ACCESSION   DASQYP010000103 DASQYP010000000
VERSION     DASQYP010000103.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 5048)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5048)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5048
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_175418"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..214
                     /locus_tag="VE783_03415"
     CDS             <1..214
                     /locus_tag="VE783_03415"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52472.1"
                     /translation="MLPPSQVLQRVYGHVGDEWSFLNQSGDIGPNHGLIAANNYTVAV
                     NQKVPTNAPRTYPVTGLGNAQAIAAA"
     gene            complement(417..1055)
                     /locus_tag="VE783_03420"
     CDS             complement(417..1055)
                     /locus_tag="VE783_03420"
                     /inference="COORDINATES: protein motif:HMM:NF012863.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GDSL-type esterase/lipase family protein"
                     /protein_id="HYX52473.1"
                     /translation="MGCGTQQTHSASATNKPAAAAERCAVLQENSTQKLTVFTGDSIT
                     DFWQQHENFSSHNWIDTGVPGVTSDFTLQHFQSDVIAARPKAVHIIIGTNDIMQQLPV
                     AGTLDHIREMIALARNARITVVLGTIPPIDQVAPAGEAQVAELNAGIISLAEGAAVKV
                     VDYHALLSGPNGDYIPRYTADGVHPSGDGYAVMTTAAEDALTFTCPDPVALR"
     gene            1467..4025
                     /locus_tag="VE783_03425"
     CDS             1467..4025
                     /locus_tag="VE783_03425"
                     /inference="COORDINATES: protein motif:HMM:TIGR03434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HYX52474.1"
                     /translation="MANLLGHVRYALRQFRQSPVFTTAAVLTLALGIGGTTAIFTLID
                     AVMLRSLPVGDPAALYRVGEGDDCCVEGGPQGRWGMFSYPLFERLKAETPEFEQIMAF
                     QAGLGRMGVRREKVDAAARPLRTEYVTGNYFAVLGIRPFGGRLLTPDDDQPSAPPVVV
                     LSHHVWQTTYGGDPGVVGSSLVIEGHPFTVIGVAAPGFFGETLRGDPPDLWIPLQQEP
                     LIEGGSSILRQPISAWLRVIGRVGPGASVAGMGPRLTTLLRQWMLHDSGYPANWLPEI
                     EQSLPKQVINVVPAGAGVEEMKEEFGRSLNMLLAVCGLVLLIACANVANLLLARAAAR
                     RGQTAVRLAVGASRRQIIVQALTESVLLAIGGAIAGLVVAVAAAKLLISLAFHTAKFL
                     PLSIVPSFKVLFVSFLLALITGIIFGAVPAWVATKTSPSEALRGVARSMGEHSTSTRK
                     ALLITQAALSVVLVAGATMLGRSLNKLENQDFGFQVPGRVVVSLQPVPASYSFPKLNA
                     LYRDLLSRVNALPGVKGSGLAMYNPLTDNWGELVLIAGHPAPQLGQEASASWDRVTAD
                     YLQNLGVPLVRGRMLRESDNENSEAVAVVNEAFVKRFFKNGEDPLDQHFGLDVPQYVN
                     TYRIVGVVRDAKFAGFALSKPARPMFYVAVAQNIDYPDPMLKMIEQRTHFARGLLLVT
                     DASPGTLEPQLTRILAEVDPNLAINRIRTLRQQIEVSFNQERAVASLAGLFGIVALLL
                     AAVGLYGVTAYSVAQRTNEIGLRMALGADRGSVLRLVLRGAFNRVLIGLALGLPLAIG
                     AGKLLARQLYGVKVWDPLALAAAASALAIAALIASIVPATRASAISPMSALRVE"
     gene            complement(4075..4956)
                     /locus_tag="VE783_03430"
     CDS             complement(4075..4956)
                     /locus_tag="VE783_03430"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HYX52475.1"
                     /translation="MQIEKLSECTICHSAQFEVLDEGCNITRCAGCGYIFDNPRPAAA
                     ELVRFYSNSGEYDGWLQDLAIRDRMWKRRLRIVKSTGKTGSLLDVGTGIGQFLDIARP
                     FYSEVYGTEVSSTAVAIAREKYGLSIFEGTLEELKQQALQFDNISMFHVLEHVPDPRQ
                     SLATCHALLSDGGILMIAVPNEIASLRGFLKRILRRMGFRTHQPGKLGIPLIRLDGSI
                     GEIHLSHFTPGVLRALLERSGFSVIKSTLDPYYLRRSGWPGLKKDLYYYGCLALHALF
                     RVNLFDAMLLIAKKRNG"
BASE COUNT          996 a         1464 c         1523 g         1065 t
ORIGIN      
        1 catgctgcct ccgagccagg tcttgcaacg ggtgtacggc cacgtaggcg acgagtggtc
       61 tttcctcaac cagtcgggcg atatcggccc caaccatggc ctgattgccg cgaacaacta
      121 cacggttgca gtcaaccaga aggtgccgac caatgctccg cgcacctatc ccgtaaccgg
      181 actgggtaat gcgcaggcca tagccgctgc ctgagagggg ttcaaagact cagggacgtg
      241 aagaacggaa gagtagccga aaagagacgt tgatcccggt gagcgcagct ctcgggcaat
      301 gaaccgaaac tccggagacc ccagcaggtg aaaagatatg cctggccggg gtctttcggc
      361 gttatgagtg ggttttgtcg ctttttctct gcaggagttc tacgggcact cggccgtcaa
      421 cgtaaagcca cagggtctgg gcaggtaaag gtaagagcgt cttcggcggc tgttgtcatc
      481 actgcataac catctccgga aggatgcacc ccgtcggctg tgtagcgggg aatgtaatcg
      541 ccgttaggac cgctcagtaa cgcgtgataa tcaactacct tcacggctgc gccttccgcc
      601 agagaaatga tgcccgcatt caattctgcc acctgtgcct cccctgcggg tgcgacctga
      661 tcaatgggcg gaatggttcc gaggaccacg gttattcgag cattccgcgc cagcgcaatc
      721 atctcccgga tgtggtcaag cgtgccggcc acaggcagtt gctgcataat gtcgttcgtt
      781 ccaatgatta tgtgtacagc cttgggcctc gcggcgatca cgtcagattg aaagtgttgg
      841 agcgtgaagt cagaagtaac gccgggcacg ccggtatcga tccagttgtg cgatgagaag
      901 ttctcgtgct gctgccagaa gtcggtgatg ctgtccccgg taaagaccgt aagcttctgc
      961 gtcgaattct cctgtaatac cgcgcatctc tcggccgccg ctgccggttt gttagtcgcg
     1021 cttgcggaat gggtctgctg agtcccgcaa cccataggca gtgcaatcag caggatgagc
     1081 gcgagagggg cggatatccg tgagcctgaa agcaaatgac cagccgttgc agcctgtgac
     1141 cctttcactg gggttccagt cccttgattc cggcgcgctg cagtagcaca ggaaagcgga
     1201 gcagcgtcgg cagcatctcg acctcaggcg aatcgacctt gttcagcata ccgggcggga
     1261 ttatatctca catgggaaaa cacctgcgat ccaggtgcaa agaaaacgtg gacaagcggt
     1321 gcatggcctg aagtcatgcc ggcctttatc gtcgtcgctc ctttttttca caatagaact
     1381 gcaatcggcc cagcaaactt tcacggaacc ttttttttga aatccccgta ttcactcttg
     1441 cagacggctt tttgcacgag gtgcgtatgg caaacctgct gggccatgtt cgctatgccc
     1501 tgaggcagtt ccggcaatcg ccggtgttca ccacggctgc ggtattgacg ctggcgctcg
     1561 gcatcggcgg caccacggcg atcttcactc tcattgacgc ggtcatgctg cgatcactgc
     1621 cggtcggcga tcccgcggcc ctgtatcgcg tgggcgaagg cgacgattgc tgcgtggaag
     1681 gcggcccgca gggccgctgg ggcatgtttt cctatccgct tttcgagcgg ctcaaggcag
     1741 agacgcctga gtttgagcag attatggctt tccaggccgg cctcggacga atgggtgtgc
     1801 gcagggaaaa agttgatgct gccgcccggc cactaaggac cgaatatgtg accgggaatt
     1861 acttcgccgt tcttggcatt cggccattcg ggggaagatt gctgacgcct gacgatgatc
     1921 agccgtctgc tcctccggtg gttgtgctga gccaccacgt ctggcagacc acctacggcg
     1981 gcgaccccgg cgtggtggga tcaagccttg tgattgaggg ccatccgttc accgtcatag
     2041 gcgttgccgc accgggattt tttggtgaga ctctgcgcgg tgacccgcct gacctttgga
     2101 ttccgctgca acaggagccg ctcatcgagg gaggaagctc cattctccgg cagccgatct
     2161 ccgcatggct gcgagtgatc gggcgcgttg gccccggagc ctccgtcgct gggatgggcc
     2221 cgcggctgac gactctgttg cggcaatgga tgctgcacga ctccggatat cccgcgaact
     2281 ggcttcctga gattgaacag tccctcccca agcaggtcat caacgtggtt ccggccggcg
     2341 ccggcgtgga agagatgaag gaagagtttg gccggagcct gaatatgctg ctcgcggttt
     2401 gcgggctggt attgctcatt gcgtgcgcaa acgtggcgaa cctgctgctg gcgcgcgcgg
     2461 ctgcaaggcg aggccagact gccgtgcggc tggcggttgg cgcgagccgt cgccagatca
     2521 ttgtccaggc gctcacggaa agcgtgctgc tcgcgatcgg cggcgcaata gcgggtttgg
     2581 tggttgccgt cgcggccgcc aaactgctga tcagcctggc gttccacacg gcgaagttcc
     2641 ttcccctcag cattgtgcct tcgttcaaag tcctgttcgt ctcattcctg ctggcgctca
     2701 ttacgggcat catcttcgga gccgttccgg catgggtagc caccaaaacc agcccttcag
     2761 aggcactgcg cggcgtcgca cgcagcatgg gtgaacactc cacgtcgacg cgtaaggcgc
     2821 ttctcattac gcaagcggcg ctctcggtgg tgctggtcgc cggcgccacc atgctgggca
     2881 ggagtctcaa caagctggag aaccaggact tcgggtttca ggttccggga cgcgttgtcg
     2941 tatcgcttca gccagtccct gcgagctact ccttccccaa attgaatgct ctgtaccgag
     3001 acctgctgag ccgggtgaac gccttgccgg gtgtgaaggg ttcaggactg gcaatgtata
     3061 acccgctcac ggataactgg ggcgagctgg tattgatcgc cggccatcct gcgccgcagc
     3121 tgggacagga ggcgagcgcc tcctgggacc gcgtgactgc ggattatctg cagaaccttg
     3181 gcgtaccact ggtgcgcggc cgcatgttga gggaatccga caacgaaaac tcagaagcgg
     3241 tggctgtggt caatgaagcc tttgtaaaac gcttcttcaa aaacggtgag gacccgctgg
     3301 accagcattt tggactcgat gtgccgcaat atgtcaacac ctacaggatc gttggcgtgg
     3361 tgcgcgatgc caagttcgcg ggcttcgccc tgagcaagcc cgcccggccc atgttttacg
     3421 ttgcggtggc gcagaacatc gattaccccg atccgatgct gaaaatgatc gagcagcgca
     3481 cccacttcgc ccggggcctg cttctggtga ctgacgcatc accgggcacg ctggaacccc
     3541 agctcacccg aattctggcg gaagtcgatc ccaatctggc gatcaatcga attcgcacgt
     3601 tgcggcaaca gattgaagtc tctttcaacc aggagcgtgc cgttgccagc cttgccggat
     3661 tgttcgggat cgtcgcgctc ttgctggcgg cggtcggcct gtatggcgtg accgcctaca
     3721 gcgtggcgca gcgcaccaac gaaattgggc tccgcatggc cttaggggcc gaccgcggca
     3781 gcgtgctgcg gttggtcctg cgcggggctt tcaatcgcgt gctgattggt ttggctctgg
     3841 ggctgccgct cgcgataggc gcggggaagc tgcttgcgag gcagctttat ggagtgaaag
     3901 tctgggaccc gctggccctg gcagccgcgg catcggcgct ggcaatcgcg gcgctgattg
     3961 cttccattgt tccagcaacg cgggcttcgg cgatttctcc catgagcgct ttgcgggtgg
     4021 aatgacgatg agaacgaccg aagaaaaact gggcggctca atcagaagcg cggctcagcc
     4081 gttcctcttc ttggcaatga gcaacatcgc gtcaaagaga ttaactctga acagcgcgtg
     4141 caaggccaga cagccgtaat agtagaggtc cttcttcaac cccggccagc cgcttcgccg
     4201 caggtaataa ggatccagtg tgctcttgat taccgaaaac ccactcctct caagcagtgc
     4261 tcgcagcacc cccggcgtga aatgggaaag atgtatctcg ccgatgctcc catccaggcg
     4321 gatcaatgga attccgagtt tgcccggctg gtgggttcgg aatcccatcc ggcgcagaat
     4381 gcgcttcaaa aagccacgca acgacgcaat ctcgttgggg acggcaatca tcagtatccc
     4441 gccgtcggaa agcagcgcat gacaggttgc gagcgattgg cgcggatcgg gaacatgttc
     4501 gagaacatga aacatgctga tgttatcgaa ttgcagtgcc tgctgcttca gttcctccaa
     4561 agtaccttca aagatgctga gcccgtactt ttcccgcgca attgccacag cggtgctgga
     4621 gacctctgtc ccatagacct cgctatagaa aggccgcgcg atatccagaa actggccaat
     4681 tcccgtgcct acgtcgagca gcgatcctgt tttccccgta gatttcacta tgcggagcct
     4741 gcgcttccac atgcggtcgc ggatggcgag atcctgtagc cacccgtcat attccccgga
     4801 attggagtag aaccggacca gttcggccgc ggcaggacgt ggattatcga aaatgtagcc
     4861 gcacccggca catcgcgtga tgttgcaccc ttcgtccaga acctcaaact gggcgctatg
     4921 gcaaatcgtg cattctgata atttttcaat ctgcatgcga gtcgcgggag gcattccagg
     4981 caagtgcgaa ccataataat actcttcacc gcggcttggc taaagccggc gatcaagtcc
     5041 acagattc
//
LOCUS       DASQYP010000104         4842 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_69854, whole genome shotgun sequence.
ACCESSION   DASQYP010000104 DASQYP010000000
VERSION     DASQYP010000104.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 4842)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4842)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4842
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_69854"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            166..1116
                     /locus_tag="VE783_03435"
     CDS             166..1116
                     /locus_tag="VE783_03435"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HYX52476.1"
                     /translation="MPPVIELDNLQVQLGPRIILDRLSGSLSGRCIGLLGPNGSGKST
                     LINTLLGFYKPLSGSVRIFGKEVQQNLRKLRARIGYMPESDAFIADMSGVRFVRYMAE
                     LSGLPADVAMERAHEAFFYVGLGEARYRKVGTYSLGMKQLAKLAQAIAHGPQLIMLDE
                     PTNGLDPEARQRMLQLVRDIRDTGEVTVLISSHLLRDIEECCDEVIILKQGKIAALCN
                     LEEERKANLKFLEMEVSNENGFLTAVRGLGCECASFGAGRIKLVLPDNIEVRQLYRLA
                     GEHSVQIRRMNYRRDSLEDIFLKAMTEKTAEAKASTNGRL"
     gene            1103..1987
                     /locus_tag="VE783_03440"
     CDS             1103..1987
                     /locus_tag="VE783_03440"
                     /inference="COORDINATES: protein motif:HMM:NF024091.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HYX52477.1"
                     /translation="MAVYKRTYKAYRGPLTPAWARFSVLSRYGLSTLFTSRAFTAYAV
                     LCGIPFLAGATFIYVVHNSAVQALLNVQFGKMPVINSSYFMGFMGFEAWMSFILAAWG
                     GPPAISKDFANNAVQLYLSRPLSRAEYLVGKVSSLATLLSLTTWIPALVLWIIQAQLQ
                     GNGWGWENLWIAGAIIIAGLLWIALISLLSMALAVWVRWRIAATALMIAVFFLLPGLG
                     EAFDLVLRASWGKLLNLPHLILMVWAELFRLPGRERHISGYDAVPLWSAWAMLLAVCV
                     FCIWLLHQRLQAREVERG"
     gene            1984..2934
                     /locus_tag="VE783_03445"
     CDS             1984..2934
                     /locus_tag="VE783_03445"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HYX52478.1"
                     /translation="MSPNDNKIVFENVSKFYGEVLGVNRVNLALPPGVTSLVGPNGSG
                     KTTLMNLMTGLVRPTQGRITVLGLTPDQPEEFFRHVGYCTQFDSFPKGVTGHEFIYQS
                     LRLRGLDPRQANQLSYESIERVGMMDAAHRRVAGYSKGMRQRIRLAQSIAHHPTVLVL
                     DEPLNGLDPMARAESIALFQALGRQGLHVIISSHVLHEVDRISDQVVLMSFGYVVAEG
                     QIHGVRSEVKEHPMQILVRCDAPNLLASRLFSQDHVVEAKLNKDGKGILVRTRDADEF
                     YLLLNKIVAEETIALEAVAPADDDVNSVYQYLIGSGGGTV"
     gene            2931..3794
                     /locus_tag="VE783_03450"
     CDS             2931..3794
                     /locus_tag="VE783_03450"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52479.1"
                     /translation="MSTAAITRRKLSEQPWQLWIAQVLAILRIEIRKNLWMRRSIWIY
                     LVAIAPVLIIGLHAIKSRGGIDCDLAQDTQILATIFQVYYLHLGIFFGCMGLFTWLYR
                     GEVVEKSLHYYFLAPMRREVLVAGKFLAGVIGSTVIFGLSVLASFTLMYGHFGQHGWN
                     YVFHGPGFGQLMAYLSVTVLACLGYGALFLALSLIFKNPILPGILVLLWETFHSVLPS
                     LLQKLSITFYLNQLCPVTIPSTGAMALFTVVAEPVSPWIAVPGLLMLTGAILIFACVR
                     MRHTEISYLAD"
     gene            3982..>4842
                     /locus_tag="VE783_03455"
     CDS             3982..>4842
                     /locus_tag="VE783_03455"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52480.1"
                     /translation="MLTAPDSINKHLTEEVRTLLADPKNKQAAMYVMALKGMAGQKGI
                     QTFEAGDTLLSYQEPRSNDKLEVHVDSDDLNGEEDNLQLSAHAFRDGKEIRQEWSSIA
                     SGFTVNMKKEQNIWRLNKISTTLEFPIGSAEFLKELMTGKEGQGQVTGIGLRASAGGP
                     ESTSSATSPDISGEQAVMMLGFAEQAFARQHPETGFTCSWSDLQDASASFGLNKQVSS
                     GSYNGYRFTLSGCEGHPAGSFRLTAEPMTGQGKAFCVDATENVRFSEDGRGATCLLSG
                     KINEQGAAWLT"
BASE COUNT          982 a         1381 c         1356 g         1123 t
ORIGIN      
        1 agcgtagtct gcgcttatgg tgatcgcgac gcgatccgcg tggccagcaa cagccgattc
       61 ttcgggctgg acctgaacac catgacgctt tccacgctgc tcagcatgac tcaacccgga
      121 ggcgcgcgag cgcactcccg atagcccaac acgaacaggg gaagaatgcc gccggtaatc
      181 gaacttgata atttgcaggt acagctgggc ccccgcatta ttctcgaccg gctgagcggg
      241 tcgctttccg ggcggtgtat tggtttgctg gggcccaacg gctccggcaa atctaccctg
      301 atcaacactc tccttggctt ttacaaaccg ctctccggat cggttcgcat ctttggcaag
      361 gaagtacagc agaatctgcg taagttgcgt gcccgcatag gctacatgcc ggagagcgac
      421 gctttcatcg ccgatatgag cggcgttcga ttcgtgcgct acatggcaga gctgtccggg
      481 ctccctgctg acgtcgctat ggaacgggcg cacgaagcgt tcttctatgt tggtctcggt
      541 gaagctcgtt atcgcaaggt cggcacctat tctctgggca tgaagcaact cgccaagctg
      601 gcccaggcca tcgcccatgg cccgcaattg ataatgctgg atgaacccac gaatggtctc
      661 gatcctgaag cccgccagcg catgctgcag ctggttcggg atatccgtga taccggtgaa
      721 gtgaccgtgc tcatctcgtc gcacctgctg cgcgatatcg aagagtgctg tgatgaagtc
      781 atcatcctga agcaaggaaa aattgctgcg ctatgcaacc tggaagaaga gcgtaaagcc
      841 aacctgaagt ttcttgagat ggaagtcagc aatgaaaatg gcttcctaac cgccgtgcgc
      901 ggccttggct gcgaatgcgc cagctttggc gcagggcgga tcaagctggt tctgccggac
      961 aatatcgaag tccgccagct ttatcggctg gctggggaac attccgtgca aattcgccgt
     1021 atgaactatc gtcgggattc tctggaagac attttcctga aagcgatgac cgaaaaaact
     1081 gcggaagcaa aggcgagcac caatggccgt ctataagcgg acttacaaag cgtatcgcgg
     1141 accgctcacc cccgcatggg cgcgcttttc cgtgctttcg cgttacggac tctccacgct
     1201 ttttacctcg cgagctttca ccgcctacgc cgtgctttgc ggcatccctt tcctggctgg
     1261 cgccacgttc atctatgtgg tccataacag cgccgtgcag gctttgctga atgttcagtt
     1321 cgggaaaatg ccggtcatta actccagtta tttcatgggc tttatgggct ttgaagcctg
     1381 gatgagcttc attctcgccg catggggcgg tccgccggca ataagcaaag actttgccaa
     1441 caatgcggtc caactctatc tcagccgccc cctctcgcgg gccgaatacc ttgtaggcaa
     1501 ggtctcttcg ctcgctacgc tcctctcgct taccacatgg attccagcac tggtcctgtg
     1561 gataatccaa gcgcaactgc agggcaatgg ctggggctgg gagaacctct ggattgccgg
     1621 cgcaatcatc attgccggac ttctctggat cgcgctgatc tcgcttcttt cgatggctct
     1681 tgccgtttgg gtacgctggc gcattgccgc gacagcgctg atgatcgcag tattctttct
     1741 cttacccggg ttgggtgagg cgtttgacct ggtgctgcgc gcgagttggg gcaaactgct
     1801 gaaccttccg cacctcatct tgatggtctg ggctgagctc ttccgtctcc ccggtcgtga
     1861 acgccacatc tccggatacg atgccgtgcc gctctggtcc gcatgggcca tgctgctggc
     1921 cgtctgtgtt ttctgcatat ggcttctgca ccagcgtttg caggcgcgtg aggtggaacg
     1981 cggatgagtc ccaacgacaa caagatcgtc ttcgaaaatg tctcgaagtt ttatggcgag
     2041 gtgctggggg taaaccgggt caatctcgct ttgccgcccg gcgtcacaag tctggtcggc
     2101 ccgaacggct ccggcaaaac aacgctcatg aacctgatga ccgggcttgt tcgtccaacc
     2161 caggggcgca taactgtgct tggtcttacg cccgaccaac cggaagagtt ctttcgccat
     2221 gtgggctact gcacccaatt cgactctttt cccaaaggcg ttaccggaca cgagttcata
     2281 taccagtcat tgcggctgcg cgggctcgac ccccgccagg caaaccaatt gtcttatgaa
     2341 tccattgagc gcgtgggcat gatggacgcc gcgcatcgca gggtcgctgg ctacagcaag
     2401 ggcatgcgcc agcgcatccg cctcgcgcaa tccatcgcac accaccccac cgtgcttgtg
     2461 ctggatgagc cactcaacgg cctggatccc atggcgcgcg ccgaatcgat tgcgctgttt
     2521 caggctctcg gccgacaggg acttcatgtg atcatctcca gccacgttct gcatgaagta
     2581 gaccgcatct ccgaccaggt tgtgctcatg agctttggct acgttgtggc ggaaggtcag
     2641 atccatggtg ttcgcagcga ggtgaaggaa cacccgatgc agattctggt gcggtgtgac
     2701 gctcccaatc tcctcgcttc gcgcctgttc tcgcaagacc atgtagtcga agccaaactg
     2761 aacaaagacg ggaagggaat ccttgttcgc acccgtgatg ccgacgagtt ctacctgttg
     2821 ctgaacaaga ttgttgctga agagacaatt gcgctcgaag cagtagctcc cgccgatgac
     2881 gacgtgaact ccgtctatca atatctgatc ggcagcggag gagggacggt atgagtaccg
     2941 ctgcgatcac gcgaagaaag ctcagcgagc agccttggca gctctggatt gcgcaggtgc
     3001 tggcgatcct gcggattgag atccgaaaaa atctctggat gcgacgcagc atctggatct
     3061 atctggtggc gattgcgccg gtcctgatca tcggacttca cgctattaag agccgtggcg
     3121 gcattgactg cgatctggcg caggacacgc agattctcgc caccattttt caggtctact
     3181 atctgcacct tggaatcttc ttcggctgca tgggactgtt cacctggctt tatcgcggtg
     3241 aagtggtcga gaaaagtttg cattactatt tcctcgcgcc tatgcgacgg gaagtgctgg
     3301 tcgctgggaa atttcttgcc ggcgttatcg gctcgactgt gatctttggc ctctctgtgc
     3361 ttgcctcatt cacattaatg tatggccatt tcggccaaca tggctggaat tacgtcttcc
     3421 atgggccagg atttggacag ttgatggcat atctgagcgt gacggtattg gcatgtcttg
     3481 gttacggcgc tctgtttctg gcactcagcc tcatcttcaa gaatcccatc ctacccggta
     3541 tcttggtgtt gctttgggag acgttccact cggtccttcc atcgctcctg cagaaattga
     3601 gcattacctt ctacttgaac cagctatgcc cggtgaccat cccatccacc ggagccatgg
     3661 cactcttcac ggtggtcgcg gaacccgtgt caccttggat tgccgtgcct ggcctcctta
     3721 tgctgaccgg cgccattctg atctttgcct gcgtccggat gcgccatacc gagatcagct
     3781 acctggctga ctaaaaacac gctccatctc tgctgggatg ggactactct ttttctgcgg
     3841 atataatcta agttcctgag gtgctgtatg tctctgcgcc gtctgctcct tcctgtaacc
     3901 cttgttgtgt ccgtgtccag cgtgtgcttg tcacaatcga acgctcctaa gccgcaaaca
     3961 gcccggcaag cgctgatcga gatgctgacg gctcccgatt cgattaacaa gcacctcacc
     4021 gaagaggtgc gcaccctgct tgccgatccc aagaataagc aggcggccat gtatgtgatg
     4081 gcgcttaagg gcatggctgg gcagaaggga atccagacct ttgaagccgg cgatacgctg
     4141 ctcagctacc aggagccgcg atccaatgac aagctggaag tgcacgtgga tagcgatgac
     4201 ctgaacggcg aagaggataa tcttcagctc tcggctcacg cctttcgcga cggcaaggaa
     4261 attcgccagg aatggagtag catcgccagc ggcttcacgg tgaatatgaa aaaggaacag
     4321 aacatctggc ggctcaacaa aatctccacc acccttgagt ttcccatcgg cagtgcggag
     4381 tttttgaaag agctgatgac tggcaaagaa gggcagggcc aggtcacagg gattggcttg
     4441 agggccagcg ctggcgggcc agaaagtact tcatcggcca ccagcccgga catatcgggc
     4501 gagcaagccg tcatgatgct tggcttcgct gagcaggctt ttgcccgcca gcatccagaa
     4561 actggcttca cgtgctcgtg gtctgatctt caggatgcgt cagcctcttt cgggctaaac
     4621 aagcaggttt catccggctc ctacaatggc tatcgcttca ctcttagcgg ctgcgagggc
     4681 catccggctg gaagtttccg ccttacggct gagccaatga caggacaagg caaagctttc
     4741 tgtgtggacg caaccgaaaa cgtgcggttt tcggaggatg gccgtggagc cacctgcctg
     4801 ttgagcggca aaatcaacga gcaaggagcg gcgtggctga cc
//
LOCUS       DASQYP010000105         4688 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_301912, whole genome shotgun sequence.
ACCESSION   DASQYP010000105 DASQYP010000000
VERSION     DASQYP010000105.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 4688)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4688)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4688
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_301912"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            190..1296
                     /locus_tag="VE783_03460"
     CDS             190..1296
                     /locus_tag="VE783_03460"
                     /inference="COORDINATES: protein motif:HMM:NF024824.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HYX52481.1"
                     /translation="MHWLPMQPQGVLSRHLLHKSPDNVDGLLSPLCSPLLTLIVTLLL
                     APASSQTLPGSGGVAEISGVIRMEGRPAPQGIQVLLDIAPSRDQAVAGTGEVDRAMTD
                     SSGRFIFPRVTALGRGNTKLFSVTVRYPGYHDAFQIVDLTFSNHGYVNLDLHRSEPDK
                     SGPRPGGIFISAHQPASPEAQQALARGEQLLLVQHDPKASIDSFKKLTRLDPKYTTGF
                     LLLGTAYMQTQSWPEARSAFEHACKLEPQNSEAWLGVGVAFDSEKEFGGAQKALAKSL
                     ELKSDSAEANYEMARSYWGAGEWQQAEPYARKALQINGNFPPPHVVMGNIYLRHRDAP
                     AALSEFEQYLKLAPEGQFAPAVKEMIAKIHQAEK"
     gene            1327..3384
                     /locus_tag="VE783_03465"
     CDS             1327..3384
                     /locus_tag="VE783_03465"
                     /inference="COORDINATES: protein motif:HMM:TIGR04514.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GWxTD domain-containing protein"
                     /protein_id="HYX52482.1"
                     /translation="MRNRLKSALTLFIILVLLAGALLAKTSVKDLPPRYRTWLNDEVS
                     YIITNEERDTFLLLPTDADRDKFIANFWEVRNPTPGAPGNAYKEEIYKRIEYAKEHLG
                     GVHTAMGQTYVTLGEPKQRAPYIGRSDVRNMEIWFYQNTNPALPPYFYVVFFDPDNTG
                     DMRFYSPYMDGPAKLTTSVMTVGNNKQALQVIDRSLGREVARTTLSLLPGSPVDMQNA
                     TASLESDVMLGILRNLANHPLTKAELEQKRMAERVTHRVILDEQFLDVLTVALRDRDG
                     NFNLHYLLRMRRPADFLIEEAEGRTFYNVDVSARVFGPDNKLVYQQRTTANNYLDAAE
                     FSRLKHSAFGYEGWLPLASGKYRVEFLLTNKLNKTAYRAEREITIPTAPGNGLRMSDV
                     VAFTGAEAVGEGRNFLPFTLGGVKFTPLTGEGLTFAPGQNVNIFYQLWAPPTQSGSSA
                     AQPLTVDYAYGRPGAAGDSKNLHEEVDRRQFDPYGSMLTGKKITLPPEAGAGNYRLLV
                     SATDPGDHQKIYASLNFRVYSGPGVAPPYDVVDPDLADEVTKGVPDFNRALCALAEND
                     RDSALRWFKVALMRNPSNEVARSRLAQLYYDKQQYADVAALFARSPVTRETDEEAILR
                     GADSIARTGSVPRAISLLEDALHIRGNSGPLYLALAGYYRNEGDTEKATQLESRGREL
                     IKQ"
     gene            3458..4573
                     /locus_tag="VE783_03470"
     CDS             3458..4573
                     /locus_tag="VE783_03470"
                     /inference="COORDINATES: protein motif:HMM:NF025910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HYX52483.1"
                     /translation="MPSSLLKYFCHLSMAVLCSGATLSAQPAAPQQPPAAAKPTPLPV
                     RQITGTVLLGTRPAPSGITVTARVVFREGDTEPHIVQTKTDSAGKFAFEHLETLGANA
                     GHENFAISAIYPGYDGDVKVVDLIESARGETTLELSPEKTVNKATAAPNPVDRFPVDK
                     GKIRKANQPQVQQAMDRGQELLFRQHNPQASTEEFRKAVKLDPWYGPGYLLLGLAYMQ
                     VANWSEAQWAFEEAQKVEPGNPQGFLGAGSAMNEQKNYAAAEKALEHTLELQPQSAEA
                     HYELARTLAALGKWEPAEAHVRRAIELNPDYAGPHALMGNIYLQQENAEQALAEYQEY
                     LRLDPQGSMAPAARQLVAQITQALAEDQPAPKPAKKH"
BASE COUNT         1020 a         1547 c         1242 g          879 t
ORIGIN      
        1 aaaagctggg ccataaccac ccgcgagagt ttggcgggcg gattacaaaa ctcacgtaga
       61 gacgcggcat gccgcgtctc actctcacgc ttgagaatgg atctgcaatc atacaaacaa
      121 gtggcgcctg tcatcctgag cgaccccgca ggagcgaagc gatcaagggg gagtcgaagg
      181 atcccgagaa tgcattggtt gccgatgcag cctcagggag ttctctcgag acacctgctg
      241 cacaaatccc ccgacaacgt tgatggtctc ctaagcccct tatgttcccc gctgctaacc
      301 ctcatcgtca cccttctcct cgcccctgcc tcctctcaaa ccctgcccgg ctccggcggc
      361 gtggcggaaa tcagcggcgt catccgcatg gagggccgcc ccgctccgca aggcatccag
      421 gtcctccttg atatcgctcc ttcccgtgac caggccgtcg ccggaaccgg cgaggtcgac
      481 cgcgctatga ccgactcctc cgggcgattc atcttccccc gcgttactgc gctcggccgt
      541 ggcaacacca agctcttctc cgtcacggtt cgctatcccg gatatcatga cgcattccag
      601 atcgtggacc tcaccttctc caaccacggc tacgtcaacc tcgatttgca ccgctctgag
      661 ccggacaaat caggcccgcg cccgggcggt atcttcatca gcgcgcatca gcccgcttct
      721 ccggaagctc aacaggcact agccagggga gagcaacttc tgctcgtcca gcacgatccc
      781 aaagcgagca ttgacagctt caagaagctc accaggctgg atcccaaata cacaaccggc
      841 tttctcctgc tcggcaccgc ctacatgcaa acgcagtcct ggccggaagc gcggtcagcc
      901 tttgagcatg cctgcaagct cgagcctcag aactctgaag catggctcgg tgtcggtgtg
      961 gcgttcgact cagaaaagga gtttggcgga gcccagaaag cgctggcaaa aagcctggaa
     1021 ctgaaatctg actccgcgga agccaactat gaaatggcgc gcagctactg gggtgcgggc
     1081 gaatggcagc aagccgaacc ctacgcgcgc aaggcgctcc agatcaatgg caacttcccg
     1141 ccgccgcatg tcgtcatggg caacatctat cttcgtcatc gtgatgcgcc ggcggcgctg
     1201 agtgaatttg agcaatacct gaagcttgcg ccggaaggcc agttcgcccc tgccgtaaag
     1261 gagatgatcg ccaaaatcca tcaggcggag aaatagcatc tactcctacg tgagctgttg
     1321 attcatatgc gtaatcgcct taagtctgcc ttaacccttt tcatcattct ggtgctcctg
     1381 gcaggtgcgc tcctggcgaa aacatctgta aaggacctgc cgccgcgtta ccgcacctgg
     1441 ctcaacgacg aagtcagcta catcatcacc aatgaagaac gggacacgtt tctgcttctg
     1501 cccacagacg ccgatcgtga caagttcatc gccaacttct gggaggtccg caatcctacg
     1561 cccggcgctc ccggcaacgc gtacaaagaa gaaatctaca agcggatcga gtacgccaag
     1621 gagcacctcg gcggggtgca caccgccatg ggccagacgt atgtaacgct tggggagccc
     1681 aagcagcgcg cgccgtacat cggccgctct gacgtgcgca acatggaaat ctggttttac
     1741 cagaacacca acccggcgct gccgccctac ttctacgttg tcttcttcga ccctgacaac
     1801 accggcgaca tgcgctttta cagtccgtac atggacggcc cggccaaact tacaacttca
     1861 gtcatgaccg ttggcaacaa taagcaggcg cttcaggtca ttgaccgctc cctcggacgc
     1921 gaagttgcgc gcaccacgct ctccctgctg cccggttctc ccgtggatat gcagaacgcc
     1981 acggccagtc tcgaatcgga cgtgatgctc ggcatcctcc gcaacctcgc caaccatccg
     2041 ctcaccaagg ccgagctcga acagaaacgc atggctgagc gcgtcaccca tcgcgtcata
     2101 ctcgacgaac agttcctcga cgtgctgacc gtggcgctgc gcgatcgtga cggaaacttc
     2161 aacctgcatt acctcttgcg catgcgtcgt cccgcggact ttctgatcga agaagctgag
     2221 ggcaggactt tttacaacgt cgacgtgtct gcccgcgtct tcggcccgga caacaagctc
     2281 gtataccagc agcgcaccac cgccaacaat tatctcgacg ccgccgaatt ctctcgcctg
     2341 aagcacagcg ccttcggcta tgaaggctgg ctaccgctcg cttccgggaa atatcgcgtt
     2401 gaatttctgc tcaccaataa gctgaacaag accgcctacc gtgccgaacg cgaaatcacc
     2461 atacccactg cgccaggaaa cggcctgcgc atgtcggacg tggtggcttt caccggcgct
     2521 gaagccgtgg gcgagggccg caattttctt cccttcaccc tcggcggcgt gaagttcacg
     2581 cctctcacag gcgaagggct gaccttcgcg cccgggcaga acgtgaacat cttctatcag
     2641 ctctgggcgc cgcctaccca gtccggctca tccgctgctc agcctctcac cgttgattac
     2701 gcctacggcc gtcccggcgc tgccggcgac agcaagaatc tccatgaaga agtcgatcgc
     2761 cgccagtttg atccttatgg ctccatgctc actggcaaga agatcacgct gcctcccgaa
     2821 gcgggcgctg gcaattatcg cttgctggtc agcgccaccg atcccggcga ccatcagaag
     2881 atttacgcat cgctcaactt ccgcgtttac agcggtcccg gcgtcgcgcc gccctacgat
     2941 gtcgttgatc ccgatctcgc ggacgaagtc accaaaggcg taccggactt caatcgcgcg
     3001 ctctgcgccc tggctgagaa cgacagggac tccgccctgc gctggttcaa ggtcgcgctc
     3061 atgcgcaacc catcgaatga agtagcgcgt tcccggctcg cgcagcttta ttacgacaaa
     3121 cagcagtacg ccgacgttgc cgcgctgttc gcccgctctc cggtgacccg cgagaccgac
     3181 gaagaggcga tccttcgcgg agctgacagc attgcccgca ccgggagcgt gccccgcgct
     3241 atctcgctgc ttgaagacgc tctgcacatc cgcggcaaca gcggcccgct ctacctcgcg
     3301 ctggccggct attaccgcaa tgagggtgat accgagaaag ccacgcaact ggagtccagg
     3361 ggccgtgaac tgataaaaca gtagtcaaga cctctctcag ccgccgttat cttcgcctgc
     3421 tgcaagaccg cgcggcctga gcgttctctg attacgcatg ccttcatccc tgcttaaata
     3481 tttctgccat ctttctatgg cagtgctctg ttccggtgca actttgtctg cgcagccagc
     3541 cgctccgcag cagccgcctg ccgcggcaaa accgacgcct ctaccagtgc gccagattac
     3601 cggcacagtg ctgctcggga ctcgccctgc gccttcgggc attaccgtga ctgcgcgcgt
     3661 cgtttttcgc gaaggcgata ccgagccgca catcgtgcaa accaaaacgg actcggccgg
     3721 caaattcgcc tttgaacatc tggagacgct gggcgccaac gccggacatg agaacttcgc
     3781 cataagcgcg atctatcccg gatatgacgg cgacgttaaa gttgtcgacc tcatagaatc
     3841 cgctcgcggc gaaaccactc tggagctctc tccggaaaag actgtcaata aagccaccgc
     3901 tgctcccaat cctgtggacc gcttccctgt agataaagga aaaatacgga aagccaatca
     3961 gcctcaggtg caacaggcaa tggaccgcgg gcaggaacta ctcttccgcc agcacaaccc
     4021 acaggccagc actgaggaat ttcgcaaagc cgtaaaactc gatccatggt acggccccgg
     4081 ctacctcctg cttggcctgg catacatgca ggtggcgaac tggagtgaag ctcagtgggc
     4141 ctttgaagaa gcgcaaaagg tcgaacccgg caatccccag gggttccttg gtgcaggctc
     4201 agccatgaac gagcagaaga actacgctgc tgcggaaaaa gcgctggagc acaccctgga
     4261 actgcagccc caatcagccg aggcccatta cgaactggca cgcaccctgg ctgcgcttgg
     4321 caaatgggag ccggctgaag cgcatgtccg ccgagccatt gaactcaacc ctgattacgc
     4381 cggcccgcat gcattgatgg ggaacattta tttgcagcag gaaaacgccg agcaggcact
     4441 ggcggagtat caggaatatc tgcggcttga tcctcagggg agcatggccc cggcggcccg
     4501 ccagctcgtg gcccagataa cacaggcgct ggctgaagat cagccagcgc ccaaacctgc
     4561 caaaaaacac tgattgaaga actagttcac cggacgctgc ggcttgctct ctcgtatggt
     4621 ctgaatccgc tcaaaaaccg ccttcaccac gcgatcgcaa cggacagcat ggaactggta
     4681 gaggtccg
//
LOCUS       DASQYP010000106         7501 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_278814, whole genome shotgun sequence.
ACCESSION   DASQYP010000106 DASQYP010000000
VERSION     DASQYP010000106.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 7501)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7501)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7501
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_278814"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1072)
                     /locus_tag="VE783_03475"
     CDS             complement(<1..1072)
                     /locus_tag="VE783_03475"
                     /inference="COORDINATES: protein motif:HMM:NF014301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M28 family peptidase"
                     /protein_id="HYX52484.1"
                     /translation="MRFRRNLSFACAAAVSAFFPAIAQNSDLNAHQYLEDVKELTAPQ
                     MEGRGDGTKGLTRAEHLIVQRYKELGLQPAGTNGYLQPFTVITGANLKGNNQLTIEQK
                     DKKVRLKLNEEYVPFSFSSSGAATAPVVFAGYGITADEFHYDDYAGLDVKDKIVLVLR
                     YEPASFGGNTGMTIHSQLISKAINARSHGAKAVLLVNGKLGAGEEDLLTRFGSVSGPV
                     DVGILLVQMKNAAADKLLPQGKTLAGIQEQIEKSSQPASFALPGDVKVALQVGVEHTR
                     AQVNNVLAYLPGETDEYVILGAHYDHLGRGNFDSLAPSQIGQIHFGADDNASGTAGTL
                     ELARHFVGLHTRLRRGILFANFA"
     gene            1301..1699
                     /locus_tag="VE783_03480"
     CDS             1301..1699
                     /locus_tag="VE783_03480"
                     /inference="COORDINATES: protein motif:HMM:NF022963.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3224 domain-containing protein"
                     /protein_id="HYX52485.1"
                     /translation="MTQHARGTFDVKLTPASNDDKEQPALARFSLEKQFHGDLEGTSK
                     GEMLSTGSPSGSGGYVAMERITGTVAGRTGSFALQHSGVMNHGIPQLNITVVPDSGTG
                     QLAGLSGSLTIERKDGKHYYDLEYTLAAGK"
     gene            complement(1710..2450)
                     /gene="kdsB"
                     /locus_tag="VE783_03485"
     CDS             complement(1710..2450)
                     /gene="kdsB"
                     /locus_tag="VE783_03485"
                     /EC_number="2.7.7.38"
                     /inference="COORDINATES: protein motif:HMM:NF003952.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008690 - 3-deoxy-manno-octulosonate
                     cytidylyltransferase activity [Evidence IEA];
                     GO_process: GO:0009244 - lipopolysaccharide core region
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-manno-octulosonate cytidylyltransferase"
                     /protein_id="HYX52486.1"
                     /translation="MAAPLGFRAVAIIPARLASTRLQRKVLREIGGKQMLHRVYDAAR
                     ACSLLADVIIATDSEEVLQLAQSHGWKAEMTSSEHRSGTDRVYEIAQRVPADVYINVQ
                     GDEPLARPEHLEALLNPMRRPEIMVSTIATPCGPEDVANPNAVKVVTAQNGRALYFSR
                     STIPFDRDKTGKVQYSKHLGFYAYRPEALAKFCKWPESRLEAAERLEQLRFLDNGMDI
                     YVEQTPFNTVGVDTEEDLKRVEQIILNG"
     gene            complement(2453..2959)
                     /gene="purE"
                     /locus_tag="VE783_03490"
     CDS             complement(2453..2959)
                     /gene="purE"
                     /locus_tag="VE783_03490"
                     /EC_number="4.1.1.21"
                     /EC_number="5.4.99.18"
                     /inference="COORDINATES: protein motif:HMM:TIGR01162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009320 - phosphoribosylaminoimidazole
                     carboxylase complex [Evidence IEA];
                     GO_function: GO:0004638 - phosphoribosylaminoimidazole
                     carboxylase activity [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5-(carboxyamino)imidazole ribonucleotide mutase"
                     /protein_id="HYX52487.1"
                     /translation="MADSPLVSIVMGSDSDLEIMNEAAKALEDFGIPYEIDVSSAHRS
                     PARTSEFAKNAAGRGIRVIIAGAGGAAHLAGVIAAETTLPVIGVPIPSVLNGLDSLLS
                     IVQMPAGIPVATTAIGKAGATNAGILAAQIIGLGNQGVAGKLKSLKEKLARSVEEKSQ
                     KLKQMRKS"
     gene            complement(3006..4283)
                     /gene="purD"
                     /locus_tag="VE783_03495"
     CDS             complement(3006..4283)
                     /gene="purD"
                     /locus_tag="VE783_03495"
                     /EC_number="6.3.4.13"
                     /inference="COORDINATES: protein motif:HMM:TIGR00877.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004637 - phosphoribosylamine-glycine
                     ligase activity [Evidence IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylamine--glycine ligase"
                     /protein_id="HYX52488.1"
                     /translation="MKVLVIGSGGREHALVWKIRQSPRVEEVFCLPGNGGICDESTCL
                     PGDPKNLEGLLAAAHQIHPDLTVVGPELPLSFGVVDEFTRRGLKIFGPTQAAAQLEAS
                     KSFAKEFMQRHNVPTAHYAVCTSEDEVRKSLGLFSTPVVVKADGLAAGKGVVIAQTKE
                     EATAVSGEMFSGRLLGQPVDRIVLEEFLEGEELSFLVMSDGERVAPLVASQDHKRIGD
                     GDTGANTGGMGAYSTDALADTAMVDWLLNHIARPVVEGMKAEGKTFKGILYCGLMITP
                     RGPMVLEFNCRFGDPETQAVLMRLESDLVEAMEAAVDGRLSDGVFRWSQDASCCVVVT
                     SGGYPGGYMAGKPISGLDLAARIAGVKVFHAGTSKRDGQYFTNGGRVLGVTARAPKLK
                     DAIARAYEAAGQISFEDIYYRKDIGARALKAQP"
     gene            4443..5783
                     /locus_tag="VE783_03500"
     CDS             4443..5783
                     /locus_tag="VE783_03500"
                     /inference="COORDINATES: protein motif:HMM:NF012880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent dehydrogenase
                     E1 component subunit alpha"
                     /protein_id="HYX52489.1"
                     /translation="MATKSKPAKSADKKRQQEQGSANGRNGAPGKKATASPQSSPAPK
                     VPAIRTNQYGIPDWRLEQPEFEVLEITDGPEVHYEIRGKLDTPVPPIRPSKYLSPEQH
                     VELYRWMVMNRRMEIALENLYKQSKVVGGVYFGLGQEACSCASAYALGPDDWFAPMIR
                     NQGAQLVRGFHARDIMMQYMAKSGSPTHGKDGTSHYGDIEKRHMVSPISMLGDLIPVM
                     AGVSLGARLQGKELACLTWIGDGGQSTGVSYEGINLAAVRKLGLVLIVESNLWAYSTP
                     TEYQVAVKDLANRAVGYGMPGVIIDGTDACQVYDATYEAVQRAHRGGGPTLIEAKLMR
                     MKGHAIHDAAAYVPKEMHDFWRKRDCNDRFEKYLLEKKWLTPEQNQKLIDEVEKELDA
                     DRDFAVNSPMPEPHTAAEGVYCDGCHEIRPKYGMPKKARGEGKLKETEAAIHFK"
     gene            5911..6885
                     /locus_tag="VE783_03505"
     CDS             5911..6885
                     /locus_tag="VE783_03505"
                     /EC_number="1.2.4.-"
                     /inference="COORDINATES: protein motif:HMM:NF006667.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-ketoacid dehydrogenase subunit beta"
                     /protein_id="HYX52490.1"
                     /translation="MAETTYLEAIRQGLWEEMEQDPSVFCIGEDIGIYGGAFKVTDGF
                     VHHFGPQRVIDTPIAESAIVGAAFGAALTGLRPVAEFQFMDFIGCAFNQIVNMVAKSH
                     YRWGAPAPLVLRGPCGGGVHGGPFHSQNPEMYFVHTPGMKVVAPATPSDAKGLIKSAI
                     RDNNPVLFLEHKFLYRRIKEEVPENGHTVPIGKARVHRQGRDLSIITYAAMVHTAQEA
                     ADILAKDGIEVETLDLRTLSPLDREAIAQTVKKTNKVILLHEDTRTGGLAGEIAAIIN
                     EEAFDDLDGPIVRITSLDTPVPFSPPLEHYFLPKVEDVVREARKLHSY"
     gene            7009..7425
                     /locus_tag="VE783_03510"
     CDS             7009..7425
                     /locus_tag="VE783_03510"
                     /inference="COORDINATES: protein motif:HMM:NF013995.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EVE domain-containing protein"
                     /protein_id="HYX52491.1"
                     /translation="MRCLAALGISENMYYLLKTEPSVYGFAELQKEGTTIWDGVSNPV
                     ALKNLRGMNKGDKLVIYHTGDERKAVGTATVESVDASDAKNPQVKIKAGHLISHPVQL
                     AEIKASELFGASPLLKQGRLSVVPLSKEQYEWLTGR"
BASE COUNT         1570 a         2236 c         2206 g         1489 t
ORIGIN      
        1 cggcaaagtt ggcgaacaga atcccgcgcc gtagcctggt atgcaggcca acaaaatgcc
       61 gcgccagctc cagcgtgccc gccgtgccgg aagcattgtc atcagcgccg aagtggatct
      121 ggccgatctg gctgggcgcg agcgaatcga aattcccccg gcccaggtgg tcataatgag
      181 cgcccaagat cacgtattca tcggtttcgc cgggcagata ggcaagcaca ttgttgacct
      241 gcgcgcgcgt gtgctccact ccaacctgaa gcgccacctt cacatcgccc gggagagcga
      301 atgacgccgg ctgcgagctt ttctcaatct gctcctgaat cccggccagc gtctttccct
      361 ggggcagaag cttgtccgcg gccgcgttct tcatctgcac cagcagaata cccacgtcca
      421 ccgggccgct tacgctgcca aagcgggtga gcaggtcttc ctcgcccgct ccaagcttcc
      481 cattcaccag caaaacggct ttcgcaccgt ggctgcgggc gttgatggct ttactgatga
      541 gctgtgagtg gatcgtcatg ccggtgttgc cgccgaagct tgccggctca tagcgcagca
      601 ccagaacgat tttgtctttc acgtccaggc cggcgtagtc gtcgtagtgg aactcgtcgg
      661 cggtaattcc gtacccggcg aagactacag gtgcggtggc cgctccggaa ctggagaagc
      721 tgaacggaac atactcctca ttcaacttga gccggacctt tttgtccttt tgctcgattg
      781 tgagttgatt attgcctttg agatttgctc cagtgatgac cgtgaacggc tgaaggtatc
      841 cgttggttcc ggcaggctgc agtccaagtt ccttataccg ctgcacaatc aggtgctcgg
      901 cgcgcgtgag ccctttggtt ccgtcgcccc ggccttccat ctgtggcgct gtgagttcct
      961 tcacgtcctc cagatattgg tgggcattga ggtcagagtt ctgggcaatg gcgggaaaga
     1021 atgcggatac agcggccgca caggcgaatg acaagttccg tcgaaaacgc atggtcaccc
     1081 tcaccagctt gcaatcgctc tagtttatcg ctctggtcaa atcatcccgt gacgggcatc
     1141 acgcgcctgt gcttgacctt tggcttggtc tcacagatga tctggctggc ctatgaaagc
     1201 tacccatcta atcgtgctct tttcggcgtg tgcgctttgc ttgttctcgt tcgcgcagac
     1261 gaaaactccc gcccagcccc agcccaataa ggagactgcc gtgacccagc acgcccgcgg
     1321 aactttcgac gtaaagctca cgcccgcatc caacgacgac aaagaacagc cggctctcgc
     1381 ccgcttctcg ctggagaagc aattccacgg cgacctggaa ggcaccagca agggagagat
     1441 gctctcgacc ggtagcccga gcggctctgg cggatacgtc gcaatggaga ggatcaccgg
     1501 cacggtggca gggcgcacag gcagcttcgc ccttcagcac agcggtgtaa tgaatcacgg
     1561 cattccgcag ttgaacatca ccgtagtgcc cgattccggc actggccagc tcgccggcct
     1621 cagcggttca ctcacaatcg agagaaaaga tggcaagcat tattacgatc tggagtacac
     1681 actcgcggct gggaaatagc ggcgggactt cagccgttca ggataatctg ctcaacccgc
     1741 ttcagatctt cttccgtatc cacgccaacg gtgttgaacg gcgtctgctc aacatagata
     1801 tccatcccat tgtctaagaa ccgcagttgt tccagtcgct cggccgcttc gagccttgac
     1861 tccggccact tgcagaactt cgccagggcc tccggccgat acgcataaaa ccccaggtgc
     1921 tttgagtatt ggaccttccc cgtcttgtcg cgatcgaaag gtatggtgga gcgggagaag
     1981 tataaagcgc ggccgttctg ggcggtgaca accttcaccg cgttgggatt cgccacatcc
     2041 tctgggccgc acggcgtcgc aatggttgaa accatgattt caggccggcg catcgggttc
     2101 agcagtgctt ccagatgttc cggccgtgcc agcggctcat caccctgcac gtttatataa
     2161 acatccgctg gcacgcgctg agcaatctcg taaacacggt cagtcccgct gcgatgctcg
     2221 gaggaggtca tctctgcttt ccagccgtgg ctctgggcca gttgcaacac ctcctctgaa
     2281 tccgtggcaa tgatcacgtc cgccagcagc gagcaagcac gcgcagcgtc atagacgcgg
     2341 tgcagcatct gcttgccgcc gatctcacgc agcaccttac gttgcaggcg tgtggaggcc
     2401 agccgcgccg ggatgattgc aaccgcgcgg aagccgagcg gagccgccac ggctagctct
     2461 tcctcatctg ttttagcttc tgcgacttct cttccacgct gcgcgccagc ttctctttca
     2521 gggatttcag cttgcccgcg acaccctgat taccgagccc gatgatctgg gcggccagaa
     2581 tgcccgcatt agtcgctcca gctttgccaa tcgcagttgt cgctacggga atgccagcag
     2641 gcatctgcac gatcgagagc agcgagtcca ggccgttgag aacggaagga atcggcactc
     2701 cgatgaccgg cagcgtggtt tcagccgcga tcacgcctgc caggtgtgct gcgccgcccg
     2761 cgcctgcaat gatcacgcgg atgccgcgtc cagcagcgtt cttggcgaac tctgaagtcc
     2821 gcgccggcga ccggtgcgcc gacgaaacgt cgatctcata tggtatgccg aaatcttcca
     2881 gcgccttggc ggcttcattc atgatctcca ggtccgaatc cgaacccatg acaatggaaa
     2941 caagggggct atctgccatt tagtctcttt tctccgaatg tttgattgtt gagcccttca
     3001 ggaatttacg gctgggcctt cagcgctcgc gcgccaatgt ctttgcggta ataaatgtcc
     3061 tcaaagctga tctgcccggc ggcctcatac gcccgggcga ttgcatcctt cagcttaggc
     3121 gcgcgcgcag tcacgccaag cacgcgtccg ccattagtga aatactggcc gtcgcgcttg
     3181 ctcgtgcccg cgtggaaaac tttcactccg gcgatccggg cggcgaggtc aagcccggaa
     3241 atcggcttgc ccgccatgta gccgccgggg tagccgccag aggtgaccac cacgcaacag
     3301 gaagcgtctt gtgaccagcg gaagactcca tcactgagcc ggccatccac ggccgcctcc
     3361 atcgcttcaa caagatcgct ctccagtctc atcaggacag cttgcgtttc tggatcgcca
     3421 aagcggcaat tgaattccag caccatgggg ccgcggggtg tgatcatcag cccgcaatag
     3481 aggatgccct taaaggtttt accctctgcc ttcatcccct cgaccaccgg ccgcgcgatg
     3541 tgattcagca gccagtccac catggcggta tcggcaagtg cgtcggtgga gtaggcgccc
     3601 atgccgcctg tgttggcgcc agtgtcgccg tcaccaattc gtttgtggtc ctgtgaggcc
     3661 accagcggcg caacccgctc gccatcactc atcaccagga atgagagctc ttcgccttcc
     3721 agaaactctt ccagcacgat ccgatccacc ggctgcccca gcagtcgccc gctgaacatc
     3781 tcaccgctca cagctgtggc ttcttccttg gtctgggcga tcaccacgcc cttacctgca
     3841 gccagcccat cggcctttac caccaccggc gtggagaaca gcccgagcga tttacgcacc
     3901 tcatcttctg acgtgcaaac cgcgtaatgc gccgtgggaa cattgtggcg ctgcatgaac
     3961 tccttggcga agctcttgct cgcctccagt tgggcagcgg cctgcgtcgg tccgaatatc
     4021 ttgagtccgc ggcgtgtgaa ttcatccacc acaccgaacg atagcggcaa ctccggccca
     4081 accacggtca agtccgggtg gatctggtgc gcggccgcca gcaggccttc cagatttttt
     4141 ggatcgcccg ggaggcaggt ggattcatcg cagatgccgc cgttgccggg caggcaaaaa
     4201 acttcctcca cccgcggcga ctggcgtatc ttccagacga gcgcgtgctc cctgcctcca
     4261 ctaccaatga ccagaacctt catagacgaa gtaaaaagaa tccaccctgg gaactgacat
     4321 tcgaggataa atcatggagc gctgatgcgc gagagcgcgg gtcggctctg aaatcacttc
     4381 cccttgcgcc gctccggatt tccggaaagc cccctttcgg gtagtaaact agaaattcgt
     4441 ctatggccac gaagtccaaa ccagcaaagt ccgccgacaa gaaaaggcag caggaacaag
     4501 gctcagccaa cggccgcaac ggcgcccccg gcaagaaggc gacggcttcc ccgcagagtt
     4561 ctcctgcccc caaggttccc gccatccgca ccaaccagta cggcatccct gactggcgcc
     4621 tggagcagcc tgaattcgaa gttctggaga ttactgacgg gccggaggtc cattacgaga
     4681 tcaggggcaa gctggatacg ccagtgccgc cgatccggcc gtcaaagtat ctctcgcctg
     4741 agcagcacgt tgagctctat cgctggatgg tgatgaaccg gcgcatggag attgcgctgg
     4801 agaacctcta caaacagagc aaggttgtgg gcggcgttta ctttgggctg ggacaggagg
     4861 cgtgctcctg cgcgtcggct tacgcgcttg ggccggatga ctggtttgcg ccgatgatcc
     4921 gcaaccaggg tgcgcagctt gtacgcggct tccatgcgcg cgacatcatg atgcagtaca
     4981 tggccaagtc tggatcgccg acgcacggca aagacggaac ttcgcactat ggcgacatcg
     5041 agaagcgcca catggtctca ccgatctcca tgctcggcga cttgattccg gtaatggccg
     5101 gcgtctcact gggagctcgg ctgcaaggga aagagctggc ctgcctgacg tggattggcg
     5161 acggcggcca atcgaccggc gtgagttatg aaggcatcaa cctggcggct gtacgcaagc
     5221 tggggctggt gctgatcgta gaaagcaatc tttgggccta ctccacgccc acggaatatc
     5281 aggtagcggt gaaggatttg gcgaatcgcg ccgtcggtta tggcatgccg ggtgtgatta
     5341 ttgacggcac ggatgcctgc caggtgtacg acgcgacgta tgaagcggtg cagcgggcgc
     5401 atcgcggtgg ggggccaacg ctgattgagg ccaagctgat gcgcatgaaa ggccacgcca
     5461 tccacgacgc cgcggcgtat gtcccgaaag agatgcatga cttctggcgc aagcgcgact
     5521 gcaatgatcg ctttgagaaa tatctgctgg agaagaagtg gctcacgccg gagcagaacc
     5581 agaaattgat cgacgaagtg gagaaagagc tggatgccga tcgcgacttt gccgtgaact
     5641 ccccgatgcc ggagccgcac acggcggcag aaggcgtcta ctgcgacggc tgccatgaga
     5701 ttaggccgaa atacggcatg ccgaagaagg cgcgcggcga gggcaagctg aaagagacgg
     5761 aagcggcgat acattttaag tagttttttt gaaatctcga gcgaagcgag agatccctac
     5821 actcgagaag aagttgccag agcgaatgat ccaaagagag cgtttgcggt ttatagggat
     5881 ccctcgctgc gctcgggact tcggaaaaga atggctgaga cgacatatct cgaggcaatc
     5941 cggcagggac tctgggaaga gatggagcaa gatcctagcg tcttctgcat tggcgaagac
     6001 attggtattt atggcggcgc cttcaaggtg acggacggat tcgtgcacca ctttgggccg
     6061 cagcgcgtga tcgatacccc aatcgccgag tcggcgattg tgggcgctgc gttcggtgcg
     6121 gcgcttaccg ggctgcgtcc tgtggccgag ttccagttta tggacttcat tggctgcgcc
     6181 tttaaccaga tcgtgaacat ggtggccaaa tcgcattatc gctggggcgc tccggcgccg
     6241 ctggtgctgc gcggaccctg cggcggcggc gtgcacggcg gcccgttcca ctcgcagaat
     6301 ccggagatgt acttcgtgca cacgccgggg atgaaggtgg ttgctccggc cacgccgagc
     6361 gacgctaagg ggctgatcaa gtcggcgatc cgcgataaca atcccgtgct cttcctcgaa
     6421 cacaaatttc tttatcgccg gatcaaggaa gaagtcccgg aaaatggcca caccgtaccc
     6481 atcggcaagg cgcgcgtgca tcgccaggga cgcgacctga gcatcatcac atacgcagcg
     6541 atggtccaca ccgcgcagga agccgcggac atcctggcca aagacggaat tgaagtggag
     6601 acactggacc tgcgcacgct atcaccgctt gatcgcgagg cgattgccca gacggtgaag
     6661 aagacgaaca aagtcatcct gctgcacgaa gacacacgca ccggaggact ggcgggcgag
     6721 atcgcggcca tcatcaatga agaagctttt gacgatttgg atggcccgat tgtgcgcata
     6781 acgtcgctgg acacgccggt gcctttctcg ccgcctctgg agcattattt cctgcccaag
     6841 gtggaggatg tggtgcggga ggcgcgaaag ctgcatagct actgatctga aatcccgagc
     6901 gacagcgagg gatccctata gtcgcgacta tgtgcaggtg cgcgagggaa gcaactcagt
     6961 tagactcaat gcctgaattt gatctcactt caaaagggcg tagcgtccat gagatgcctc
     7021 gctgcgctcg ggatttcaga aaacatgtac tacctcctca aaactgaacc ctccgtttac
     7081 ggctttgctg aactgcagaa ggaaggcacc accatctggg atggggtgag caatccggtg
     7141 gcgctcaaga acctgcgcgg catgaacaag ggcgacaagc tggtgatcta ccacaccggt
     7201 gacgagcgca aggcggtggg cacggcgacg gtggagtcag tggacgcgag tgacgcgaag
     7261 aatccgcagg tgaagatcaa ggccggacac ttgatttctc atcccgtgca actggcggag
     7321 atcaaagcca gcgagctgtt tggggcatcg ccgctgctga aacagggaag attgtcagtg
     7381 gtgccgctga gcaaagagca gtatgagtgg ctgacggggc ggtagtttta ttgactcccg
     7441 agcgaagcga gagagccata cccaaacgaa gccggtggat caatcgtttc cttgcggtga
     7501 t
//
LOCUS       DASQYP010000107         3648 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_258520, whole genome shotgun sequence.
ACCESSION   DASQYP010000107 DASQYP010000000
VERSION     DASQYP010000107.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 3648)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3648)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3648
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_258520"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..500)
                     /locus_tag="VE783_03515"
     CDS             complement(<1..500)
                     /locus_tag="VE783_03515"
                     /inference="COORDINATES: protein motif:HMM:TIGR04282.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2064 domain-containing protein"
                     /protein_id="HYX52492.1"
                     /translation="MSQRLPAAMVTALYRCLLTDTITLARSLTGVEVAVMCPSSDCDE
                     VADFLGRAVPVVPQNGEGLAAGLISVFAQFAAAGRQRTIAFNSDSPHLASSVLYSAFQ
                     ALEVRDLVIGPTHDGGYYLVGAKASHPTLFENDGLGTSSALERLLTRAQALELSSALT
                     EPFYDI"
     gene            complement(620..1327)
                     /locus_tag="VE783_03520"
     CDS             complement(620..1327)
                     /locus_tag="VE783_03520"
                     /inference="COORDINATES: protein motif:HMM:NF012745.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HYX52493.1"
                     /translation="MRVSVIIPTHNEAQAIGRVLSDLPPEIVSEIIIVDSNSNDGTPE
                     IAAQMGACVVQEPRRGYGRACLTGLEHAKDPDVVVFLDGDYSDRPSELPILLAPIIER
                     RADITLGSRLGSSRNSGALPWHQSFGNHLAAAMIRRLYGVKITDLGPFRAGRASVLRS
                     LALEEATYGWAVEMILKGARAGFSIVEVPVSYHPRIGKSKISGTLKGTVGAAWFILSR
                     IVRYYFERRKAGAAQAR"
     gene            complement(1337..1828)
                     /locus_tag="VE783_03525"
     CDS             complement(1337..1828)
                     /locus_tag="VE783_03525"
                     /inference="COORDINATES: protein motif:HMM:NF016089.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DoxX family membrane protein"
                     /protein_id="HYX52494.1"
                     /translation="MATSAGAASSIRHSQAANGLALVRLTIGAMFVWVFFENLGKGLY
                     TAGGYSSLINYYIKMSHSPAAWKAVMGSAANHAALAAPMQAITEISLGILLVLGLLTR
                     PAALVAFFFLGSLWISEWGTSWIWELLVPVLASLGLALGRAGRAWGLDALLAQRNPSS
                     PLW"
     gene            complement(1995..2071)
                     /locus_tag="VE783_03530"
     tRNA            complement(1995..2071)
                     /locus_tag="VE783_03530"
                     /product="tRNA-Met"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(2035..2037),aa:Met,seq:cat)
     gene            2217..>3648
                     /locus_tag="VE783_03535"
     CDS             2217..>3648
                     /locus_tag="VE783_03535"
                     /inference="COORDINATES: protein motif:HMM:NF013862.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="patatin-like phospholipase family protein"
                     /protein_id="HYX52495.1"
                     /translation="MTSLGEQRGSRPSEPPAIPKSEAPSEGNISNQEKGAATSKAQPA
                     DIKPEQRSKPRPRIGIALGGGAALGLAHIGVLKYFEEHHIPIDDIAGTSMGGLVGGFY
                     ATGISATDLQEIALDAPWDDLLSPNYRFFDEPIVEKQEWNRQPGWLTLRLGSRLNLPA
                     GINSGQRLALLLSRNTEPYSNLMTFDELPTPFRCVATDLVSGSPVVLDHGSLPKALRS
                     TMAIPGIFTPVAWEGKVLVDGGVTNNLPSNVVRGMGADKVIAVLVQVPSPNAKQFTSL
                     AAVLRQTVSVGIVQNERQGAAEADTLVRVVVKGITPTDYEQSLKIIQQGYDAARAMAN
                     ELSAYSVSDGEWNDYVAQRKARIRSARKRGPLAQVDAAQPVIQRNAVHELHRKLGAGD
                     FDQDHLEDVLSGIVAAAGLPGAYYEWTRKPEGEEGYRVEFLERPDHILVLRPAVAFNV
                     SNEEPTRAALNLGTTWVPLSTYKSRVV"
BASE COUNT          807 a         1086 c         1053 g          702 t
ORIGIN      
        1 tcaatgtcat aaaaaggctc tgtcagagcg ctggagagtt ccagagcctg cgcacgcgtc
       61 agcagtcgct caagggcact gctggtcccc agcccatcat tttcaaaaag cgtgggatgt
      121 gatgcctttg cgccgacaag atagtagcca ccatcatgtg tcggcccgat caccaggtcg
      181 cgaacctcga gcgcctgaaa agcgctatac agaacggagg acgcaaggtg cgggctgtca
      241 ctgttgaacg cgatggtacg ttgtctgcca gcggcagcaa actgtgcgaa caccgaaatc
      301 agcccagccg ccagcccctc cccgttttgc gggacgactg gtactgccct gcccagaaaa
      361 tccgccactt catcgcagtc cgacgagggg cacattaccg ccacctccac gccggtcaat
      421 gaccgtgcaa gcgtgatcgt gtccgtcaaa aggcatcgat acaatgccgt caccatcgca
      481 gccgggagcc tttggctcat gcgggtcttg acggttcccg gtctcggcgc cttcgccatg
      541 atgaccagtg tgcaaccttg ggcagagtaa cgcgcactat tttggtgctc ggattccata
      601 caatatccgg cggcagacct catcgggctt gcgccgctcc agctttgcga cgctcgaaat
      661 aatagcgcac gatacggcta aggatgaacc acgcggctcc cactgtgccc ttcagcgtgc
      721 cgctgatctt cgattttccg atccgcggat ggtaactcac cggaacttca acaatgctga
      781 atcctgctcg agcgcctttc aagatcatct ccaccgccca gccgtaagtg gcctcctcga
      841 gcgccaggct gcgcagtacg ctggctcggc cagcgcgaaa cggaccgaga tcagtaattt
      901 tgactccata caaccgccgg atcatggcgg cggcgagatg attgccgaac gactggtgcc
      961 agggtagagc gccggaattg cgggaagatc ccaggcgcga cccaagcgta atatccgccc
     1021 gacgttcgat gatgggagcc aataaaatcg gcaactccga cggccgatca ctgtaatctc
     1081 catccaggaa gacgacgacg tcgggatcct tcgcgtgctc caatccagtc aggcaggcgc
     1141 gtccatatcc gcgacgaggc tcctgtacta cgcaagcccc catttgtgcg gcgatctccg
     1201 gcgttccgtc atttgaattg ctatcgacga tgattatttc gctcacgatc tcgggcggca
     1261 gatcggagag cacgcggcca atggcctgcg cttcattgtg ggtgggaatg atgactgata
     1321 ctcgcacgcc tgacgctcac cacaacggcg aagacgggtt ccgctgtgca agcagcgcgt
     1381 caagacccca tgctcgaccc gctcgtccta gcgcgagccc aagggaggcg agtaccggaa
     1441 ccaataattc ccaaatccag gaggttcccc actctgagat ccagagactg cccaggaaga
     1501 aaaacgcaac gagagccgcc ggccgggtca gtaatcccag gaccaacaga attccgagcg
     1561 atatttctgt tatggcctgc atcggagctg ccaacgcggc atggttggct gccgacccca
     1621 taaccgcctt ccacgcggct ggcgaatggc tcattttgat gtagtagttg atcaaactcg
     1681 aatagccgcc cgccgtgtac aaacccttac ccaggttttc gaagaatacc cacacgaaca
     1741 tcgcgccaat cgttaaacgg accagagcca gaccgtttgc tgcttgcgag tggcggatcg
     1801 aactcgctgc acctgcactc gtcgccatgt gaacctcttt cgaaccgcac ttgacccggc
     1861 tgggccaaga tcagaccgcg cagattatac ccccgaagga tccaaaggtg tcactgaacg
     1921 aacggaccag gagaggagga acaaacatcc gctccttcaa aattttgatg gttgatgtaa
     1981 gtgagtgctg aggttggttg cggggggtgg atttgaacca ccgacctttg ggttatgagc
     2041 ccaacgagct accaggctgc tccaccccgc aaatccaata taacagcggg gatacaggcg
     2101 gtcaaacatg ttggtgcgcg cttgatgtgg tagtttcagt gtgtctttta cacatcgtaa
     2161 tgcctcagct tgcaaagcgc gttggcgtgt ggctcgcact ttttgcgtgc accttgatga
     2221 cctcgctagg ggagcaacgc ggcagcaggc cgtcagagcc gcccgccatc ccaaagtcgg
     2281 aagcgccctc ggaagggaac atctcgaacc aggagaaagg tgctgcaacg tccaaagctc
     2341 aacccgccga cataaagcca gagcagcgga gcaaaccacg gcctcggatt ggcattgcgc
     2401 tgggcggagg agcggcgctg ggcctggcgc acatcggagt cctcaagtac tttgaagaac
     2461 accatatccc aatcgacgat atcgccggaa ccagcatggg aggactggtg ggcgggtttt
     2521 atgcgactgg gatctccgcc accgacctgc aggagatcgc gcttgatgct ccatgggacg
     2581 atctactcag ccccaattac cgcttttttg acgagccgat cgtggaaaag caggagtgga
     2641 accggcagcc gggatggctc acgttgcgtc tgggcagccg gttgaatctt cccgccggaa
     2701 ttaattccgg gcagcggctg gcgctgctgc tgagtcgcaa cactgagcca tactcaaacc
     2761 tcatgacgtt cgacgaactg ccaacacctt tccgctgtgt ggccacagat ctggtaagcg
     2821 gcagtccggt ggtgctggat cacggttccc tgcccaaggc cctgcggtca accatggcga
     2881 tccccggaat ttttacgcca gttgcgtggg aaggcaaggt gctggtggat ggtggtgtga
     2941 ccaacaatct gccttccaac gtggtgcgcg gaatgggagc cgacaaagtg attgccgtac
     3001 tggtgcaggt gcccagcccc aatgcgaagc agttcacttc gcttgccgcc gtgctgcgac
     3061 agaccgtctc cgttgggatt gtccagaatg aacgccaggg agcggcggaa gcggacacgc
     3121 tggtgcgcgt tgtggtgaaa ggtataacgc caacggatta tgagcaatcg ctcaaaatca
     3181 tccagcaggg ctatgatgca gcgcgcgcta tggccaatga gctctcagcc tattcggtca
     3241 gcgacggtga gtggaacgac tatgttgcac aacgcaaggc ccgcatccgt agcgctcgca
     3301 aacgcggtcc gctggcgcag gttgatgctg cccagccggt gattcagcgc aacgcagtgc
     3361 atgagctcca tcgcaagctt ggcgcgggag attttgacca ggatcacttg gaagacgtgc
     3421 tttccggtat cgtcgccgcg gcgggccttc ccggcgctta ttacgagtgg acaaggaaac
     3481 cagaaggcga ggaaggctat cgcgtcgaat tcctggaacg cccagaccac attctggtgc
     3541 tgcgtccggc cgtcgccttc aacgtctcaa acgaggagcc cacgcgagcc gcgctgaacc
     3601 tgggaacaac ctgggtgccg ctctcgactt acaaatcccg cgtcgtgg
//
LOCUS       DASQYP010000108         3456 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_301988, whole genome shotgun sequence.
ACCESSION   DASQYP010000108 DASQYP010000000
VERSION     DASQYP010000108.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 3456)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3456)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3456
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_301988"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..985)
                     /locus_tag="VE783_03540"
     CDS             complement(<1..985)
                     /locus_tag="VE783_03540"
                     /inference="COORDINATES: protein motif:HMM:NF024832.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oligosaccharide flippase family protein"
                     /protein_id="HYX52496.1"
                     /translation="MAENVMRLKGQARRGLATLALRYGVVIAINLLGTVVLSRFVGPA
                     VWGVFAVAQVVYMGSQEILGRGAASYLIKKTEAPSSSDLKNAFAFQHLLGLLSLVVAA
                     ALAFPAARWYQEPSLAFLLVAAAIAAYGCAWRSIPVALLERELDYFKVAIIEVFEALV
                     FSGIAIAFAWKGHALPGLAIATALRSILPTLLSYCFRQSRPALLYDRKAAAGMADFGF
                     FILLGSIFNIAILFVPVIFVGKMVGSDALGEARMAFSLYGNLLFFTAAVLRLSFSSYS
                     RLAEYPGEMQLALRQNLRLLAALLCPAVALFAGLAALWVPPIFGPKWPKLPL"
     gene            complement(1018..1818)
                     /locus_tag="VE783_03545"
     CDS             complement(1018..1818)
                     /locus_tag="VE783_03545"
                     /inference="COORDINATES: protein motif:HMM:TIGR00696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="WecB/TagA/CpsF family glycosyltransferase"
                     /protein_id="HYX52497.1"
                     /translation="MSAATQQVIAPAAAASLNLFGIEFCGLTFDQAVAFFHDRACAGE
                     GLVAFTANVDHIVRRGKDPEFARLYQAANVVFADGTPVVWSAKLLRRPVHRVPGIDLL
                     YACLRLAGENGHRCFFLGARPDTLSKAIAIAEKTFPGLRIAGSHHGYFQDPAPVLSAI
                     AQATPHFIFVGMGSPRQERWIAENSAKIGSAIILPVGGSFEVLAGEKSRAPKFIQQVG
                     MEWVWRMLQDPQRLWKRYLVEDLPFLGMLLREMIRSVRSMGPAQDRRA"
     gene            complement(1815..3107)
                     /locus_tag="VE783_03550"
     CDS             complement(1815..3107)
                     /locus_tag="VE783_03550"
                     /inference="COORDINATES: protein motif:HMM:NF014732.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0009103 - lipopolysaccharide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Wzz/FepE/Etk N-terminal domain-containing
                     protein"
                     /protein_id="HYX52498.1"
                     /translation="MRVIEQGRRQAGDPDIIFSESLPGEKAFVIVPDEGTASSRKPVA
                     REALNVLITLAGRGRMLLAALALGALGGLLLSFILPAHYVATARILPPQASQSALTSL
                     LGQLGPLAAMGGRDLGLKNPSDIYVDMLQSRKLQDELIRLYDLKSVYGVKTLTDARKK
                     LTQRSTISASKDGLISINVDDKSAKRSADLANAYVSQLYLLNQNLATTEAGQRRLFYE
                     QQLDKAKEDLARAEVDLKQTEEETGVFSLEGQGKAAVESSARLQAQIAAKEVELRSLS
                     SFATEQNPDLLRAREELAGLRQQLAILQSKQSRSDISTGKFPEAGLRYVRKLREVKYR
                     ETLFEILARQYEAAKLDESKNAAVIQTLDDAVVPEKPSYPQHGTFALLGALIALLLGV
                     VAVLAVEAGQRMMRDPERSSQLQELRSHLAGRSAGAQP"
BASE COUNT          802 a         1000 c         1008 g          646 t
ORIGIN      
        1 gaagaggtaa tttaggccat ttcgggccga aaatcggagg cacccagagc gctgccagac
       61 cggcaaaaag agccactgca gggcacaaaa gtgctgcaag caatctcaga ttctgccgca
      121 acgcaagctg catttcgccc gggtattccg caagtcgtga gtacgagctg aagctcaatc
      181 gcagaacggc ggcagtaaag aacaggaggt tgccgtaaag cgaaaacgcc attcgcgctt
      241 cacccagtgc gtccgaccca accatcttgc ctacaaaaat cacgggaacg aaaagtatgg
      301 cgatgttgaa aatgcttccg agcagaatga aaaagccgaa gtcagccatg ccggcagccg
      361 ctttgcggtc gtagagcagc gcaggacgcg actgacgaaa gcagtaactc aagagggtgg
      421 gcaggatact tcgcagcgca gtggcaatcg ccaaaccggg cagcgcatga cctttccagg
      481 caaacgcaat ggcgatgcca ctgaacacca gggcttcaaa gacttcaatg atcgcgacct
      541 tgaaatagtc aagctcgcgc tcaagcagag caacagggat gctgcgccac gcgcacccgt
      601 aagcagcaat ggcggcagcg acgagaagaa aagccagcga tggctcttga taccagcgcg
      661 ctgcagggaa ggcgagcgca gccgcaacca caagggagag cagtcccagc agatgctgga
      721 aggcgaaggc gttcttcagg tcagaggagg agggcgcttc agtctttttg atgagataac
      781 tggcagcgcc acggccgaga atttcctggc tgcccatgta gacgacctgg gcaacggcga
      841 agacacccca gaccgccggc ccgacgaacc gggagagcac gacggtgccc aggagattga
      901 tggcgataac cacgccgtag cgcagtgcca gggtggcgag cccgcggcgc gcctgtcctt
      961 tcaagcgcat aacattttca gccatcgagt tctgaaccgg aagagccgtc gacgtactca
     1021 tgctcgccta tcctgggccg gacccattga tctgactgat ctgatcatct cccgcagcaa
     1081 catgccgagg aatgggagat cttcaacgag atagcgcttc cacagccgtt gcggatcctg
     1141 cagcatccgc cacacccact ccatccctac ctgctggata aatttcggag cgcgcgattt
     1201 ctcgccagcc aaaacttcga acgaaccgcc tacaggaaga atgatggcgg aaccgatttt
     1261 ggccgagttc tcggcgatcc acctttcctg ccgcggtgaa cccatgccta cgaaaatgaa
     1321 atgcggcgtg gcttgcgcaa tcgccgaaag cacaggagcg ggatcctgga aatacccgtg
     1381 gtggctgccg gcaattctca aacccgggaa agtcttttcc gcgatcgcaa ttgctttgct
     1441 gagcgtgtca ggcctggcgc cgagaaagaa acagcggtgg ccattctctc cggcaagtcg
     1501 cagacatgca taaagaagat cgatcccagg cacgcgatgc acggggcggc gcaacagctt
     1561 cgccgaccac acgaccggag ttccatcggc aaacaccacg ttggcggcct ggtaaaggcg
     1621 cgcgaactct ggatctttgc cgcggcggac gatgtggtcc acattcgcgg tgaatgcaac
     1681 cagcccttca cctgcgcagg cacgatcgtg gaaaaacgcg actgcctggt caaaggtaag
     1741 cccgcaaaat tcaatgccga agaggttcag tgaagccgcg gcagcaggag cgatgacctg
     1801 ctgggtggcg gcgctcatgg ctgcgctccc gccgagcgtc cggcaagatg cgaccggagc
     1861 tcctgcaact ggctgctgcg ctccggatcg cgcatcatgc gctgcccggc ttccacggcc
     1921 aggacggcaa caactcccag caggagtgcg atcagagcgc ccaacagcgc gaatgtaccg
     1981 tgctgaggat acgagggctt ctccggtacc acggcgtcat ccagagtttg gatcacggcg
     2041 gcgttcttgg attcgtcgag cttggcggcc tcatactgcc gggcaagaat ctcgaaaagc
     2101 gtttcgcgat atttcacttc gcgcagcttg cggacatatc tcagtcccgc ttcggggaac
     2161 ttgccggtgc tgatgtcgct gcgcgactgc ttgctctgga gaattgcgag ttgctggcgc
     2221 aggccggcca gttcttcccg ggcgcgcaac agatcaggat tctgctcggt ggcaaaagat
     2281 gagaggctgc gcagctcaac ttccttggcg gcaatctgcg cctgcaaacg ggcagaagat
     2341 tccaccgcag ccttgccctg gccctccaga ctaaaaacgc cggtttcctc ttcggtctgc
     2401 ttcaggtcaa cttcagcccg agcaagatct tccttggcct tatcgagttg ctgctcgtaa
     2461 aaaagccggc gctggccagc ttcggtggtc gcgaggtttt gattcagcag ataaagctgc
     2521 gagacgtagg cattcgccag atcggccgag cgtttggcgc tcttgtcatc gacgttgatg
     2581 gagatcaggc catctttgct ggcgctgatg gtgctgcgct gtgtgagctt cttacgcgcg
     2641 tcggtgagtg tttttacgcc gtaaacgctc ttgagatcgt agagccggat cagttcatcc
     2701 tgcagcttgc ggctctgcag catgtccacg taaatgtcgc tgggattttt caggcccagg
     2761 tcgcgcccgc ccatggcggc aagcgggccg agttgcccaa ggagggacgt caaggctgac
     2821 tggctagcct gcggaggaag gatgcgagcg gtagcgacat aatgagccgg caggatgaag
     2881 gacagaagca gccctcctaa cgcgcccaga gccagcgccg ccaggagcat acggcctctc
     2941 ccggccaagg tgatgagcac gttcagcgct tcccgggcaa cgggcttacg ggacgaggca
     3001 gtgccctcgt cgggcacaat gacaaacgcc ttctcacccg gaagtgattc cgaaaaaatt
     3061 atgtcaggat ctcccgcctg gcggcgaccc tgctcaatga ctcgcatgtc cttcaacttt
     3121 caccaactct gctttaacgc acagctccaa cactgcggcg caaggagaaa ttcacctttg
     3181 ggcacaccta tacaacttca agggggtatt cgggtgcgtg ttatttatca cagctcttga
     3241 tgcgatacaa gttaaataaa gcaaagaact tgtgtcgcca tggttactta agaaaacgtt
     3301 aatactgggg cattcagggt ttactttctt gctactatcc caaaggcagc aacactggtc
     3361 aacgtaagac atggggctcg tgcgccaagg cgctacaggc ctgtggcttt cacgatgatc
     3421 tccgccgact tcagcgggat gaaacgattc accagc
//
LOCUS       DASQYP010000109         8744 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_279073, whole genome shotgun sequence.
ACCESSION   DASQYP010000109 DASQYP010000000
VERSION     DASQYP010000109.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 8744)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8744)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8744
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_279073"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(448..3231)
                     /locus_tag="VE783_03555"
     CDS             complement(448..3231)
                     /locus_tag="VE783_03555"
                     /inference="COORDINATES: protein motif:HMM:TIGR03434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HYX52499.1"
                     /translation="MKFLGAFRPKNKTSEISEEFNFHLQKQIEKNIAGGMPPNEARRQ
                     ALISFGGVQQAREQVSEVRWAHWFEVLRQDARYAVRILGKTPLFTAIVVITLSLGIGM
                     NTAIFSLIDSVLFRRMPVSHPEQLVLLRWEAHHNPRLRQHRSFGACQTRFQESDAVGC
                     SFSMPILHAVEAQNGLFSGIAAYSRTGDISLSGNGPASVINSLEYVSGEFFSTLGVTA
                     AAGRTIKREDDSPAAPAVAMLSYGYWQTAFGGAPDVVGRTVSLNRAPFTIVGVAEKAF
                     RGITPQDATDVWVPFSAQPLLSQQFTKDQWASTSWFLAILARLKDDVPRERAEAALNL
                     TFQNETLHGENPIFKAEEKPTLRAVPAQQGLDGGRQRTLEPMYVVMMAVALVLLIACA
                     NIGGLLLARATRRSREIAVRLTLGARRSRIISQLLIEGLLMSVVGGLFALLVGRWGAR
                     LLLSLAGTGPRGLNLEPQLDFRVMAFTFGLSVLTTLIFSLAPALRSLRVDLTPALKAG
                     SGASESATGRGVWLNLGNGLVVAQVTLAIVALVSAGLLMRTLKNLRASDLGFNPTNVL
                     LFSINARTAGYKPGQLDPLQRDLQEQIAALPGVQSVTYTTMPLASGSLWTTEIHLPGT
                     PEKNTPEADYIGAGRGFFKATQIPLKAGRDFNEADYAIARAQASLPPGADPDVNSPPM
                     PAIVNQKFVQQYLQGREPLGQHIEDPVPEPPSTHRGPGYTIIGVAGNIRDQNMRREMA
                     PTLYVPSSGDEVFMVRTAVDPMSLVPVIRSTFTQRDANLAMFDIKTQQESIDETYTME
                     RLVTQLSTFFALLAVLLACAGIYGLLSYEVTRRTREIGIRIAIGADRVDVLKMVVRHG
                     LVLAIAGAAIGAAASLGATKVLGSLLYQVKARDPFTIAVVAVIVIAVSLFACWLPARR
                     ATMVDPLVALRYE"
     gene            complement(3254..3583)
                     /locus_tag="VE783_03560"
     CDS             complement(3254..3583)
                     /locus_tag="VE783_03560"
                     /inference="COORDINATES: protein motif:HMM:TIGR03433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PadR family transcriptional regulator"
                     /protein_id="HYX52500.1"
                     /translation="MSNQIELLQGTLDLLILKTLAVGAMHGWGIAQRIEQVSDEVLQV
                     GQGSLYPALARLEQRGWVAAEWSTSENNRRAKYYSLTKAGAKQLQKELGEWQRLSAAI
                     ALVLQQS"
     gene            complement(3709..4827)
                     /locus_tag="VE783_03565"
     CDS             complement(3709..4827)
                     /locus_tag="VE783_03565"
                     /inference="COORDINATES: protein motif:HMM:NF013237.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HYX52501.1"
                     /translation="MKIETLAIHAADQPELSRDVTPAIHLSTTFQKAEDGSLRGGHLY
                     SRPSNPNRDQLERALATLEGGAAALAFSSGSAATSAALQSLSPGDHVLAPHDAFYGTQ
                     ALLKNILSRWGLQSSQVNMQELSAVERALEVKPKLVWLETPSNPLMGVTDLRAVVAMA
                     KSTGALVACDNTVATPMLQRPLELGADIVMHSVTKFLSGHSDVLSGVLVFREAGPLFE
                     RVHEMQRETGGVPSPFECWLTLRGIQTFPYRMRAHCENAQHVAEFLSRHPRIEAVHYP
                     GLATHKGHKVAASQMTGGFGGLMSMQVRGGREAAFNVCAGVKIFTHATSLGGTHSLIE
                     HRASVEGPNTLSPQNLLRLSIGLEHWEDLIADLDQALS"
     gene            complement(4853..5404)
                     /locus_tag="VE783_03570"
     CDS             complement(4853..5404)
                     /locus_tag="VE783_03570"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52502.1"
                     /translation="MAPQTPNATPSFYTFPSFNPGRRQLIYGTLLSLVTFVGIAFVFN
                     FATSETLHTAFDNVSYGRIDPSPIFVENSDTPANETVVPLSLPMEVLRALAGSYRDTS
                     GETITLVLHDRELNFQSATITSPLVPVSDHKLLFRNGAERWIEFSAPAGSIERLDFFD
                     GRTHRILMKHAEIRFQDSDPMTR"
     gene            complement(5469..5861)
                     /locus_tag="VE783_03575"
     CDS             complement(5469..5861)
                     /locus_tag="VE783_03575"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52503.1"
                     /translation="MSFLLHFLLALQLALPPANVAPQNPFSGSDFAIRVTPVRATMAQ
                     GGKTTFDLFIDSSRPIVYSLKLDGIPPAVRPDIPKLLPGINTITLSCPADAPSGTYSI
                     QATLLSNQSQQTQTFALEITPLREAPGQ"
     gene            6140..8599
                     /locus_tag="VE783_03580"
     CDS             6140..8599
                     /locus_tag="VE783_03580"
                     /inference="COORDINATES: protein motif:HMM:TIGR03434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HYX52504.1"
                     /translation="MDTLLQDIRYAFRTLLNARSFTLVATVTLALGIGANTAIFSVVN
                     AVLLRPLPFAESDRLMAVHTMNSRAGSEPGTSSVSYADFTDYRTQNHSFEDLASYYGN
                     DFSLTGGSEPLLLRGQIAGTAFFSLLHVQPVLGRGFLPGEDQPGHKVAVISYALWRSR
                     FKSDPGISGRAIELSGKPYTIVGVAPEHFQFPVDSRATDIWVSSSHDTDAKPGEKPLT
                     VQRGAHFLSVIGRLKPGVTREQAETDLSAIALSLSQQYPDTNLNEKAVSVQQVLKDLI
                     GDTQRPLMILLAAVGCVLLIACANVANLVLARSISRSREIAVRAALGASKFRIVRQLV
                     TQSLVLAAFGALLGTLFARWAVSAVVQLYPQNLPRVQEVSLDPKVLVFTAALTVLTGL
                     LFGLAPAVLASRVNLNEAMREGGRGSGGSARYTRLRSGLVVAETAVGVMLLIGAGLLI
                     RSMHKLSHVDLGFAPDHTLTASFEISPTKYDPDQQDRFYTELLNRVRAIPGVLSAGGI
                     GQLPLSNDGWSISFDVLERPLPKSQQHSAGFYQVTAGLFETMKIPLLRGRTFDEHDTR
                     DGKPVMIINSAFQKRYFPNEDPIGKMIAIGAGDGKDRVKWRTREIVGVVGDIRTTEVA
                     EPANPAYFVPIPQLVWGAPTLVIRTAGDPNTILPEVRRTLASMDPDAPLYDAKLLEDY
                     LALALGRARFETTLLSLFAAVALVLTTVGLYGVIAYTVAQRTHEIGVRIALGASRSDV
                     LRMLLNRGLLLTFSGVAIGVIGALGLAKLISSMLFETPPRDPVTYFVVSFTLCAVALV
                     AGLVPASRASRIDPITALRYE"
BASE COUNT         1767 a         2645 c         2514 g         1818 t
ORIGIN      
        1 ttctttcctt gcctgttgaa tgtacctctt gttgctgtgt agcacaggcg ccccgcctgt
       61 gccgcaggaa tgagaacctg tcgccgcaaa ttgacccaca ttgaaaaaag ctggcggttc
      121 gtggttcatc acgcttccaa acaagagacg atctgacgct gaatgacgag gcgcaagggc
      181 tggtcctgca agaaaaggcg ttcgctctgg attgttgagt cgtttgatcg tctgatcaga
      241 tccgaggagg aggactttga ggacaagaac tctctacatt acctgaacgc ggtggaaacc
      301 tgctcttggt ggcctagcat gagagagcct aaacggaaga agagaatcaa ttatcggtcg
      361 ctcggtaagg gtaacctgca caggcggggg cgcctgtgct acaaagcgta ttcgccgatt
      421 gaatcatcta tgagacagct tctactgcta ctcgtacctg agcgccacca gggggtccac
      481 catggttgct cgccgtgccg gcagccagca tgcaaataag gagacggcga tcacgatcac
      541 agcaaccacc gcgatcgtga atgggtctcg cgccttcact tgatacagca agctgcccag
      601 caccttggtc gcgcccagtg acgcagcggc cccaatcgcg gcgcctgcaa tcgccagcac
      661 cagcccgtgc cggaccacca tcttcaacac gtctacgcga tccgcaccga tggcgatgcg
      721 gatgccaatc tcccgcgtac gtctcgtgac ctcataggag agcagcccgt aaatccctgc
      781 gcatgccagc agcaccgcca ggagcgcaaa aaacgttgag agctgagtca ccagccgctc
      841 catcgtataa gtttcgtcaa tgctctcctg ctgcgtcttg atatcaaaca tggccagatt
      901 ggcatcgcgc tgcgtgaacg tgctgcggat tacgggcaca agtgacatgg gatcgaccgc
      961 ggtccgcacc ataaaaacct catctcccga agaggggacg tacagagtcg gcgccatttc
     1021 ccggcgcatg ttctggtctc ttatgttgcc tgcaacgcca atgatggtgt agcccggacc
     1081 gcgatgcgtg ctaggcggct cgggcaccgg atcctcaatg tgctgcccca gaggctcgcg
     1141 gccctgaaga tattgctgta cgaatttctg gttcacgatc gcaggcatcg gcggagagtt
     1201 gacatcggga tctgcgcccg gcggaagcga tgcttgggca cgcgcgatcg cgtaatcggc
     1261 ctcattaaag tcgcgacccg ccttgagcgg aatctgcgtg gccttgaaga atccgcggcc
     1321 cgccccaatg tagtcagctt cgggcgtgtt cttttccggc gttcccggga gatgaatttc
     1381 agtggtccac agcgagcccg aagccagagg catggtcgta taagttacag actgaacgcc
     1441 cggcaacgcg gcaatttgtt cctgaaggtc acgttgcaga ggatcgagct gacccggctt
     1501 gtagcccgcc gtccgcgcat tgatggaaaa tagcaggaca ttagtgggat tgaacccgag
     1561 gtcagaagca cgcaggttct tcagcgtccg catcagcagt ccggcgctga ccaacgccac
     1621 gatcgcgagc gttacctgcg ctaccaccag cccgttaccc agattcagcc agactccgcg
     1681 gccggttgcg ctttcagaag cgccgctccc agccttgagc gctggagtca ggtcgacccg
     1741 tagactcctt aatgccggcg ccaggctgaa gatcagagtt gtcagcactg agaggccgaa
     1801 tgtaaaggcc atcacacgga agtcaagttg aggctccaga ttcagacccc gcggtccagt
     1861 acccgccagt gaaagcagga gtcgcgctcc ccagcggccc accagcaggg caaagaggcc
     1921 gccaaccact gacatgagca atccttcaat caacaactgg gaaatgatgc ggctgcgccg
     1981 cgcacccaaa gtcagccgca ctgcaatctc ccgcgaacgc ctggtagcac gggccagcaa
     2041 cagcccgccg atgttggcac aggcgatcag cagaaccagc gccaccgcca tcatcaccac
     2101 gtacatgggt tcaagcgtgc gctgcctgcc gccatcgagt ccctgttgcg caggcacggc
     2161 gcgcagcgtc ggtttctctt cggccttgaa gattggattc tctccgtgca gagtttcatt
     2221 ctggaacgtc aggttcagtg ccgcctctgc ccgctcacgc ggtacgtcat ctttcaggcg
     2281 cgccagaatc gccaggaacc aggaagttga agcccattga tctttggtga actgctggga
     2341 aaggaggggc tgggcggaaa aaggcaccca cacatccgtg gcatcctgcg gcgttatgcc
     2401 gcgaaaagcc ttttctgcca cgcccacgat cgtgaacgga gcccggttga gggatacggt
     2461 tctaccgact acgtcaggcg caccgccaaa cgcggtctgc cagtaaccat agctcagcat
     2521 cgccacggcc ggtgcagccg gagaatcgtc ttcacgtttt atcgttcgcc ctgccgcagc
     2581 agtcactccc agcgtggaaa aaaattcccc ggacacgtac tcaaggctgt tgatcacact
     2641 cgcggggcca ttgccgctca ggctgatatc accggtgcgt gagtatgctg cgattccgga
     2701 gaaaaggcca ttttgcgctt ccacagcgtg caggattggc atggagaacg agcagcccac
     2761 agcatcgctt tcctggaatc gtgtctggca tgcgccaaaa ctccggtgct ggcgaagcct
     2821 ggggttgtgg tgagcttccc atcgtagcag aaccaactgc tccggatgac tcactggcat
     2881 ccgacgaaac agcaccgaat cgatcaggct gaagatcgcg gtgttcatcc cgatgcccag
     2941 ggagagcgtt atgactacga tcgccgtgaa cagcggagtc ttacccagaa tgcggacggc
     3001 gtagcgggcg tcctgccgca acacctcgaa ccagtgcgcc caacgaactt cagagacctg
     3061 ctcgcgcgcc tgctgcactc cgccaaagga aatcaacgcc tgccgtcgtg cctcgttcgg
     3121 tggcatgccg ccggcaatat tcttctcaat ctgcttttgc agatggaagt tgaactcttc
     3181 gctgatctcg ctggtcttgt ttttcggtct gaatgcgcca aggaatttca tcctgattct
     3241 ccgtgccttc ccattagctc tgctgcagca ccagcgcaat cgccgcggaa aggcgttgcc
     3301 actcgcccaa ttccttctgc agctgtttcg cgcccgcttt cgtaagcgag taatacttcg
     3361 cccgccgatt gttctccgaa gtgctccact cagcggccac ccagccacgc tgctccagcc
     3421 gcgccagggc tggatacagc gagccctgtc ccacctgaag cacttcgtca gagacctgct
     3481 caatacgctg ggcgatgccc cagccatgca tcgcgccgac agcgagtgtc ttcaggatca
     3541 aaagatccag cgtgccctgc agaagctcaa tttgattgct cacgttgctc ccctcgaatg
     3601 tcgacaacaa ttagacttcc gctcttgtcg aatgtcaaca acaagcaaaa aaccgggagg
     3661 tttcggggtt ggaaatgccg gcgatgcatg ggagtggaaa gctttccctc aggagagcgc
     3721 ctgatccaaa tccgcgatca aatcttccca gtgctccagc ccaattgaga gccgcagcag
     3781 gttttgcggg ctgagagtgt tgggaccctc caccgacgca cgatgttcaa tgaggctgtg
     3841 cgttcccccg aggctggtag cgtgggtaaa gattttcacg ccggcgcaga cattgaacgc
     3901 cgcctcacgt ccgcccctca cctgcataga catcagcccc ccgaagccgc cggtcatctg
     3961 cgaagccgcc actttgtgcc ccttatgcgt ggccagcccc gggtaatgca ccgcttcaat
     4021 cctgggatgg cggctcaaaa attccgccac gtgttgcgcg ttctcgcaat gtgcgcgcat
     4081 gcgataagga aatgtctgga tgccgcgtag ggtgagccag cattcaaaag gcgacggcac
     4141 accgccggtt tcacgctgca tctcgtgcac acgctcgaac aatggtccgg cttcgcggaa
     4201 caccagaacg ccactgagca cgtcactatg gccggaaaga aacttcgtaa ccgagtgcat
     4261 cacaatgtcg gcgccgagtt ccagcgggcg ctggagcatg ggggtggcaa ctgtgttatc
     4321 gcaggcgacc agtgcgcccg tgcttttcgc catggcaacc accgcgcgaa gatcagtaac
     4381 gcccattaaa ggattggaag gcgtctccag ccaaaccagt ttcggcttta cctccagggc
     4441 ccgctccacc gcagaaagct cctgcatgtt tacctgcgaa gattgcagtc cccacctgga
     4501 caggatgttt ttcagcaacg cctgggttcc ataaaacgca tcatgcggag caagcacgtg
     4561 gtcgccggga gagagcgatt gcagcgccgc agaagtagcc gcactgcctg atgaaaatgc
     4621 cagcgcggct gcgccgccct ccagcgtggc cagcgcacgc tccagttgat cgcgattggg
     4681 attgctcggt cgcgaataga ggtgccctcc acgcaggctg ccatcctctg ctttctgaaa
     4741 ggtggtggaa agatggatgg ccggcgttac gtcgcggctc aattccggct gatcggcagc
     4801 atggatggcg agggtctcga tcttcatgac cgttcagggt acatgaagcg gctcagcggg
     4861 tcatagggtc cgaatcctgg aaacggattt ctgcatgttt cataaggatg cgatgggttc
     4921 gcccatcaaa gaaatccagc ctttcgatgc tgcccgccgg ggcggagaac tcaatccagc
     4981 gttccgcgcc attgcggaac aataatttgt gatctgaaac cggtaccagg ggtgaagtta
     5041 tagtggcgct ttggaagttc agctcgcggt cgtgaagtac cagagtgatc gtctcgccgg
     5101 aggtgtctcg gtagctgccg gcaagcgccc gcaacacttc catgggaagt gacagtggaa
     5161 ccacggtttc attcgccggt gtgtcggaat tctctacgaa gatcggtgag ggatcgatcc
     5221 ttccgtagct cacattgtca aaagctgtgt ggagtgtttc gctggtcgcg aaattgaaaa
     5281 caaacgctat tccaacgaat gtgacgagcg atagaagtgt tccatagatc agctgccgcc
     5341 ggccgggatt gaagctggga aaggtgtaga aactcggcgt ggcgttcgga gtttgcgggg
     5401 ccattggatg atttccccct gacgctccca cttattgtac gctgcctgcc gctagcgcgg
     5461 cgttccggtc attgaccagg cgcttcgcgc aatggcgtga tctccagcgc aaacgtttgt
     5521 gtctgctggc tttggttgct gagaagggtc gcctgaatgg agtaggttcc gctgggggca
     5581 tcagccggac aagaaagtgt gatcgtgttg atgccgggta gaagtttggg aatatccggc
     5641 cgcaccgcgg gcggtatccc atccagcttg aggctgtata caatcggccg gctgctgtcg
     5701 atgaacaaat cgaatgtggt cttgccaccc tgcgccatgg tggctcgcac gggcgtgacg
     5761 cgtatggcga aatctgatcc agagaacggg ttctgtggag caacattcgc aggcgggagc
     5821 gccaactgga gggcgagcaa gaaatgcagc aggaaagaca tggccaaacc tcggcgggtt
     5881 tgatgcattg agcagctcac cgggacgcct gtgccgccgg cgcacattct cgaatgcctg
     5941 aattgggcaa gtttgcggtc tgatatgggc agcttgaaca ttcgcgctgt ccgttttcgc
     6001 acatctcctg ccagcagcgc acagttccca tctccgtgcc cgatcgcttg ccctttagtt
     6061 ccaactactt agatgtgaac tgcagcggaa tctcgaatgc ttttttaatc cggaaccttt
     6121 cattacgggg agcaactctg tggacacgct gcttcaggat atccgctatg cctttcgcac
     6181 cctgctcaat gctcgcagct tcaccctggt ggccacggtt actctggcgc tcgggattgg
     6241 ggcgaacacc gcgatcttca gcgtggtgaa cgccgtcctt ctgaggccgc tgcccttcgc
     6301 cgagtcggac cgcctgatgg ccgtacacac catgaactcg cgagcgggca gcgagccagg
     6361 gacttcatct gtgtcgtatg cggatttcac cgactatcgt acgcagaacc acagctttga
     6421 agacctggcc agctattatg gcaatgattt ttccctcact ggcggcagtg agccgctgtt
     6481 gcttcgcggt cagattgcgg gtacggcgtt cttcagcctc ctgcacgttc agcccgtcct
     6541 cggccgtggc tttttgcccg gcgaagatca gccgggacac aaggtggcag tgatcagcta
     6601 cgcgctttgg cgttcgcgct tcaagtctga tcccggcatc tccggacgag cgattgagct
     6661 cagcggaaag ccctacacga ttgtcggcgt tgcgccggag cacttccagt tcccggtgga
     6721 ctcgcgcgcc accgacatct gggtgagctc atcccacgac accgacgcca agccgggcga
     6781 aaaacctcta actgttcagc gcggcgcgca tttcctttcg gtgatcgggc ggctcaaacc
     6841 gggagtcacg cgcgagcagg ccgagacgga tctctcggcg attgcgcttt ctctctcgca
     6901 gcaatatcca gacaccaatc tcaatgagaa ggcggtctcc gtccagcagg ttttgaaaga
     6961 cctgatcggt gacacgcagc gtccgctgat gatcctgctg gcagccgtgg gatgtgtact
     7021 gctgattgcc tgcgccaatg tcgccaatct ggtgctggcg cggagcatca gccgcagccg
     7081 ggaaattgcc gttcgcgccg cactcggcgc ttcgaaattc agaattgtcc gccaattggt
     7141 gactcaatcg ctggttcttg ccgcgtttgg cgcgctgctg ggaactctct ttgcccgctg
     7201 ggccgtgagc gccgtcgttc aactctatcc gcaaaatcta ccgcgcgtgc aggaagtgag
     7261 cctggacccc aaagtcctgg tgtttaccgc cgctctaacc gttcttaccg gactgctctt
     7321 cgggctggcg cccgcggtgc tggcgtcacg cgtaaatctg aatgaagcca tgcgcgaagg
     7381 tgggcgcggg tcaggtggaa gcgcacgtta cacgcgcttg cgctccggac ttgtggtggc
     7441 tgaaactgct gttggcgtca tgttgctgat cggcgctggc ctgctgattc gcagcatgca
     7501 caagctctct catgtggacc tgggcttcgc ccctgaccac acgctaacgg cctctttcga
     7561 aatctcgccg acgaagtacg accctgacca gcaagaccgc ttctacaccg agctgctcaa
     7621 ccgcgtgcgc gcgatccccg gcgtgctttc tgccggagga attggccagc ttccgctctc
     7681 caatgacggc tggagcatct ctttcgacgt cctggaacgc ccgttgccga agagccagca
     7741 gcacagcgca ggcttttacc aggtgaccgc aggtctcttt gagactatga agatcccgct
     7801 gctccgcggt cgcacctttg acgagcatga cacgcgcgac ggcaagccgg tgatgatcat
     7861 caacagcgcc ttccagaaac gctatttccc caacgaagac ccgatcggca agatgatcgc
     7921 gatcggggcg ggcgacggca aagaccgcgt caagtggaga acgcgcgaga ttgtcggcgt
     7981 cgtaggcgac attcgtacca ctgaagtggc cgagcctgcc aatccggcat attttgtgcc
     8041 cattccgcaa cttgtctggg gcgcgccaac gctggtgatc cgcaccgccg gcgatcccaa
     8101 caccatcttg ccggaagtgc gcaggactct ggcctccatg gatcccgacg cgccgcttta
     8161 tgacgctaaa ctcctggaag actatctggc gctcgccctg ggccgcgcgc gctttgaaac
     8221 cacactgctc agcctgtttg ccgcagtcgc tctggtgctc acaactgtgg ggctttatgg
     8281 cgtgatcgct tacacggtcg cacaacgcac tcatgagatc ggagtacgca tcgcgctcgg
     8341 cgcttcccgt agtgacgtcc tccgcatgct cctcaaccgc ggactgctgc tcacattttc
     8401 gggggtggcc atcggtgtaa ttggtgcgct cggactggca aagctgatct cctccatgct
     8461 ctttgaaacg ccgccacgcg acccggtcac gtatttcgtc gtcagcttca ccctgtgcgc
     8521 ggtggcattg gtggccggcc tggttccggc gtcgcgcgct tcacgcattg atccgattac
     8581 tgcattgcgc tacgagtagc gccaggtttg cccagctaca ccgaattgcg aagcttacct
     8641 cgccttactc gtctttgcgg gatgctgaat tcctgttgat cggcgttggt cccccgccag
     8701 cacgcctcgg gtcgcctgca tcgaaccatg tagctgacct gatc
//
LOCUS       DASQYP010000110         5778 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_131308, whole genome shotgun sequence.
ACCESSION   DASQYP010000110 DASQYP010000000
VERSION     DASQYP010000110.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 5778)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5778)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5778
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_131308"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..856)
                     /locus_tag="VE783_03585"
     CDS             complement(<1..856)
                     /locus_tag="VE783_03585"
                     /inference="COORDINATES: protein motif:HMM:NF014790.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HYX52505.1"
                     /translation="MDFQLNDEQLQLKRSIREFAEREVLPNVMKWDECGQFPIEVIKE
                     LGKMGVMGVIFPTEYGGAGLGYVEYVIAIEELSRVDGSVGIIVAAHNSLCSNHIFLAG
                     NEAQKRKYIPKLASGEFIGAWGLTEPGSGSDAGGARMSATRKKDGWVLNGTKTFITNG
                     TYADVSVVIAVTDRAAHTHGLSAFVVEKGAKGFRPGKKENKLGLRASDTAELIFEDCF
                     VPEEALLGKEGDGFIDAMRVLDGGRISIAALGLGMAQGAYEAALKYSKQRRQFNKAIS
                     EFQAIQWKL"
     gene            1277..2188
                     /locus_tag="VE783_03590"
     CDS             1277..2188
                     /locus_tag="VE783_03590"
                     /inference="COORDINATES: protein motif:HMM:NF020455.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CVNH domain-containing protein"
                     /protein_id="HYX52506.1"
                     /translation="MRNRIRLGFFVTIAAALCALMAPRASAQNVPQGSYLQTCASVQA
                     GRNGLYANCQDTQGAWRYSVLPQYQECVSDIANIDGELRCERRGGVQWDRNRQGWLPP
                     GSYAETCRDIRLDGNNMYAKCENMSHRWTRTSLQQFDGCVGGIINDNGQLVCGRRAAP
                     YSGSYVRTCGPIYVRGDDLRARCQTANGMWTWTQLDGFDRCGGDIANENGQLRCEWRG
                     REHDADYRNDRDRDHDRDGDHDRNAKHNSPRGSFQNTCRDVSVNGDHLKARCQTADGH
                     WNWSEMNDWDRCRGDIANMNGQLTCSR"
     gene            complement(2244..2993)
                     /locus_tag="VE783_03595"
     CDS             complement(2244..2993)
                     /locus_tag="VE783_03595"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52507.1"
                     /translation="MAALVEHQFREAKRIQTSFLSNIEKKTLIWLAAHTPGFINSDHL
                     TLLGLAAMAGAGASYWFASRNKLGLLLVIFFLALNWLGDSLDGTLARYRDCCRPKYGF
                     YVDHVVDAFSALFLLGGLGLSGYMSLPVALGLLIAYLLLSVEVYLATYTLGDFKISYF
                     KMGPTELRILLCIGNLALLWKPMMHLFGRAMRMYDVGGLVGVVGMLTVMCISAIRNTA
                     ALYHSEPMAVRARRTPAAAALTLRALPKAES"
     gene            3324..3653
                     /locus_tag="VE783_03600"
     CDS             3324..3653
                     /locus_tag="VE783_03600"
                     /inference="COORDINATES: protein motif:HMM:NF018894.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0035438 - cyclic-di-GMP binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PilZ domain-containing protein"
                     /protein_id="HYX52508.1"
                     /translation="MEGPDPRLAAVRQKESSTRAARQQIRIPLRYRLAGAEEWSLGET
                     INVSESGLLFASNQLLEIQTRLEITFQISGAPLLPRSMRHATIVRRVLSNWPETQLLF
                     GARYTTL"
     gene            3870..4106
                     /locus_tag="VE783_03605"
     CDS             3870..4106
                     /locus_tag="VE783_03605"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52509.1"
                     /translation="MSSQDDPGRKGSFEQFGRKMDEQLGDTARKLEQESERVITYLNN
                     EVVPSIRNKSSKALRVAAEKLQWLAEYMEQNRSK"
     gene            4067..4894
                     /locus_tag="VE783_03610"
     CDS             4067..4894
                     /locus_tag="VE783_03610"
                     /inference="COORDINATES: protein motif:HMM:TIGR00413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016829 - lyase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="septal ring lytic transglycosylase RlpA family
                     protein"
                     /protein_id="HYX52510.1"
                     /translation="MAGRIHGTEPLQVAVAVIFALALLGGCAGKRQQQAGNIPPPPPI
                     STPAPSNGPAPRTTPTPAHPGARTQPSPPVRRIPEAPEAEGELNFPPDAKVLYKQVGW
                     ASWYGPGFQSRKAANGQVFDTEKMTAAHRTLPMNSIVRVTDLKTNVSVLVRITDRGPF
                     VGDRILDLSRAAARKLSVYQRGTALVRIEVLQTPAPIDSGGRWCVQIGAFPDHDEAAR
                     LKERLTRRYHTAKILQFASPMGGDWLRILVADDARERAESLIRETRTDAGMFLVRLD"
     gene            complement(5128..5619)
                     /locus_tag="VE783_03615"
     CDS             complement(5128..5619)
                     /locus_tag="VE783_03615"
                     /inference="COORDINATES: protein motif:HMM:NF017015.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DinB family protein"
                     /protein_id="HYX52511.1"
                     /translation="MRGLSFGELLDYCAIETRKWGEFFRKNPAALDLPCDIAGVKTVR
                     ELVVHVVAVQSRYAERLLNQPVREYDPFLAMSADELFADAHRSAEDLRSFAVAANDPD
                     WDGTITFPTRSAGTFTASRRKIFIHALVHGIRHWAQLATDLRRQGYKTEWQHDFLMSD
                     VIK"
BASE COUNT         1249 a         1726 c         1670 g         1133 t
ORIGIN      
        1 cgagcttcca ttgtatggcc tggaattcgc tgatggcctt gttgaactgg cggcgctgct
       61 tggagtactt gagcgctgct tcatatgcgc cctgcgccat tcccagaccg agcgcggcaa
      121 tagagatgcg cccgccatcg agcacgcgca ttgcgtcaat aaacccatcg ccttctttgc
      181 ccagcagagc ttcttcggga acaaagcagt cttcaaagat cagctcagcg gtgtcactgg
      241 cgcgcagtcc gagtttgttt tctttctttc ccggacggaa gcccttggca cctttctcca
      301 ctacaaacgc ggacaagcca tgcgtgtgcg cggcgcgatc ggtcacggcg attacaacgg
      361 agacatcggc ataagtcccg ttcgtgataa aggtcttagt gccgttcagc acccagccat
      421 cttttttgcg agtggcgctc atgcgcgcgc cgcccgcgtc agagccggag ccgggttccg
      481 tgagtcccca ggcgccaatg aattctccgc tggcgagttt aggaatgtat ttgcgttttt
      541 gcgcttcgtt gccggcaagg aaaatgtgat tggagcaaag agaattgtga gccgccacga
      601 tgatccctac cgagccatct acgcgggaga gctcttcaat ggcgatcacg tattccacgt
      661 agcccagccc ggctccgccg tattcggtgg gaaagatgac gcccattacg cccattttgc
      721 ccagttcctt gatcacctcg atggggaact ggccgcattc atcccacttc atcacgttgg
      781 gcaggacctc gcgctcggcg aactcacgga tcgatctctt cagctgcaac tgctcgtcat
      841 tcagttgaaa atccaagctt ggcttctcct tgctggttgt ccggggcgcc tatgcggcag
      901 gtcgcgccga ttaggttctg atgctgagct gtggcgttcc gtcactcaga tcaggcgatc
      961 cgggcaaaac agatgattat cccatattcg gcggataagc ctgccgcagg ccggcaacag
     1021 agcgctctga aatgattgcg actcggtggt tataccggag agtctagggc cttttgtcat
     1081 ccgcactcca gccagggttc gcttatactg cagcaaacaa aggtaagtag ctcgaattcc
     1141 ccggcacaat aagtttgcct ttgaaagtta ctgggcggcc gaacgcaggg ccggaacttt
     1201 gggttcgttc ctgtgtttca gcagtcaatc cccagcgcca caattccgat tttctgcacg
     1261 cggaggaatg ttgaacatgc gcaaccgaat caggctcggg ttcttcgtaa ctattgcggc
     1321 tgcactttgc gcgctgatgg cgcccagagc ttccgcccag aacgttccac aggggtcgta
     1381 tctgcagacc tgcgcttccg tgcaggcggg ccgcaatggg ctttatgcca actgccagga
     1441 tactcagggc gcatggcgct attccgtgct gccgcaatac caggaatgcg tcagcgacat
     1501 tgcgaatatt gatggtgaac tgcgctgcga gcggcgcggt ggagtgcaat gggaccgcaa
     1561 tcggcaaggc tggctacctc ccggttctta cgctgagacg tgccgggaca tccggctcga
     1621 cggcaataac atgtatgcca agtgcgaaaa catgtcccac cgctggacgc gcacatcact
     1681 ccagcagttt gacggctgcg tgggcggaat catcaacgat aacggacagc tggtgtgcgg
     1741 acgccgggca gcaccttatt caggttctta cgtgaggacc tgcggcccaa tctacgttcg
     1801 cggcgatgac ctgcgcgcgc gctgccagac cgcgaatggt atgtggacct ggacgcagct
     1861 tgacggcttt gaccgctgcg gcggtgacat cgcgaacgaa aacgggcaac tgcgctgcga
     1921 atggcgcgga cgcgaacacg atgccgacta tcgcaatgat cgagatcggg accacgatcg
     1981 cgatggcgac catgatcgaa atgcaaaaca caactcaccc cgcggctcct tccagaatac
     2041 ctgccgcgac gtgagtgtga atggtgacca cctgaaagct cgctgccaaa ccgctgatgg
     2101 ccactggaac tggtcagaga tgaatgactg ggaccgctgc cgcggcgaca tcgccaacat
     2161 gaatggacag ctcacgtgta gccgctaatc tcaacacttt ccgaaagcat tccggctggc
     2221 cgcagtggcc agccggtttt gttctatgac tcggccttgg gaagcgcacg caatgtgagc
     2281 gctgcagcgg ccggtgttct gcgcgctctg actgccatgg gctcgctgtg atagagagca
     2341 gccgtgttgc gaatcgcgga gatgcacatc accgtgagca tccctacgac tccgactagt
     2401 cctcccacgt catacatgcg catagcgcgt ccaaagagat gcatcatcgg cttccataaa
     2461 agcgcgaggt ttccaatgca caatagaatg cgcaattccg ttgggcccat cttgaagtag
     2521 gagattttga aatctccaag cgtgtaggtg gccagataaa cctcaacgga gagcagcagg
     2581 taggcgatca gcagacccag ggccacgggc agcgacatgt agccggataa tcccagccca
     2641 ccgagcagga acaaggcgct gaacgcgtcg accacgtggt caacgtagaa gccgtatttc
     2701 gggcggcaac aatcgcggta gcgggccaga gttccatcca ggctgtcgcc tagccagtta
     2761 agcgccagga agaagatcac gagcagcagg ccgagcttgt ttcggctggc gaaccagtag
     2821 ctggcgcctg cgcccgccat ggcggccagg cccaagagcg tgaggtggtc agagttgatg
     2881 aagccggggg tgtgagccgc gagccagatc agagttttct tttcaatatt cgaaagaaag
     2941 ctggtctgga tgcgttttgc ttcgcgaaat tgatgctcaa cgagggcagc catagattaa
     3001 atcctcccag gattgctgtt ttcgcttgac atcatgcggc gtggagcaag gtgggacaat
     3061 gcacggcgtc tcaactggag atgaagaaaa tctcatcagc taaatggctg agcggaaagt
     3121 gcttggggat ggaggtatcg tagagcgagg aataggcagc agcgaaaata agaattaatt
     3181 ttcctaagct atctccaact cttcttgaca ggctggagga catcgcacag aatcgtttca
     3241 cctgttgcac ccccttgaaa gttgtatctc cgtaattccg gaacgggacc agtcgtacag
     3301 aaaattactc ggagattcca ttcatggaag gcccagatcc ccgcttggcg gcagtccgcc
     3361 agaaagaatc gtcgacccgc gccgcccgcc agcagattcg catacccttg cgctaccggc
     3421 tcgccggagc agaggagtgg agcctgggcg agacgatcaa cgtgagcgag tcgggcttgc
     3481 tcttcgcatc caaccagctg ctggaaatcc agacgcggct ggagatcacc ttccagattt
     3541 caggcgcgcc gctgcttccc agaagtatgc gccatgccac catcgtgcgc cgagtgctga
     3601 gcaactggcc ggagacccag ctcttgttcg gggcacgtta caccacgctg taaacacact
     3661 cagctgtccc cgatgttcgc ttgaatgaaa ccagatcctt agtcctaccc ccactgatca
     3721 tgcgcccgca tggccgctct ctccgctgcc cgcatccagc atctaactcg ggagcagcac
     3781 ctgcaggcgt caggctggtc aattgtgtgc cggcgctagc ggcctcataa tcaggtgtaa
     3841 agcattaccg atgctgagag agcaatcaca tgagttcaca agacgatccg ggccgcaaag
     3901 ggtctttcga gcagtttggc cgcaagatgg acgagcaact cggcgacacc gcgcgcaagc
     3961 tggagcagga aagcgaacgc gtgatcacct acctgaacaa cgaagttgtg ccctccatcc
     4021 gcaacaaatc aagcaaggcg ctgcgggtgg ccgcggaaaa gctgcagtgg ctggccgaat
     4081 acatggaaca gaaccgctcc aagtagcggt tgccgtaatt tttgccctgg cgctgctggg
     4141 cggatgtgcc ggcaagcgcc agcagcaggc cggcaatatt cctccgcctc cgccaatctc
     4201 cacgcctgcg ccttcaaacg gtcccgcgcc gcggaccacg cccacgcccg cgcaccccgg
     4261 cgctcgcacg cagccttcgc cgccggtaag gcgcattcct gaagccccgg aagccgaggg
     4321 cgagctgaac tttccgcccg acgccaaagt gctctataag caggttggct gggcaagctg
     4381 gtatggccca gggtttcaga gccgcaaagc cgccaacggc caagtcttcg acaccgagaa
     4441 gatgacggcc gcacaccgca cgctgccaat gaattccatt gtccgcgtca ccgacctgaa
     4501 gaccaacgtc tcagtgctgg tgcgcatcac cgatcgcggg ccgttcgtgg gcgatagaat
     4561 cctcgacctc tcccgcgccg ccgcgcgcaa gctgagcgtt taccagcgag gcaccgcgct
     4621 cgtcaggatt gaagtgctcc agacgcccgc gcccatcgac tccggcgggc gatggtgcgt
     4681 gcagatcggc gccttccctg accatgacga ggcggccagg ctcaaagagc ggctgacacg
     4741 gcgatatcac actgccaaaa tcctgcaatt cgccagtccc atgggcggcg actggctgcg
     4801 catcctggtg gccgacgacg cccgagagcg cgccgaatca ctcattcgcg aaacacgcac
     4861 cgacgccggt atgtttctgg tgcgcctcga ctgaggacga tcgccggaat cgcgcgcaat
     4921 caccggaatc gcatgaaatc gaagatcctt gccagtgatt gaaaaagctt ctagagacta
     4981 gctgctacct ttgtggcctt tgcaagcccc aatctcttaa gcgcacagac aagagtgtct
     5041 ccatcccggg ccgcggaatg cccgtccggg gaccctgggt ctgtgccaca caagccttac
     5101 cgattacgcg cgatcacggc gaatacttca cttgatcacg tccgacatca ggaagtcgtg
     5161 ctgccactcg gtcttgtagc cctggcggcg caggtcggtg gcgagctgcg cccagtggcg
     5221 gatgccgtgg accagcgcat gaataaaaat cttgcggcgg ctggcggtaa acgtgccggc
     5281 agagcgcgtt gggaaggtaa tagttccgtc ccagtcagga tcattagcgg ccacggcaaa
     5341 gctgcgcagg tcttccgcgc tgcggtgcgc gtcggcaaag agctcgtcgg cggacatggc
     5401 cagaaacgga tcgtactccc ggaccggctg gttcagcagg cgttccgcgt accgtgactg
     5461 cacggccaca acgtgcacca ccagttcgcg caccgtcttc acgccggcaa tgtcgcaggg
     5521 caggtcaagc gcggcgggat tcttcctgaa gaactcgccc catttgcgcg tctcaatggc
     5581 gcagtagtcc agcagctcac caaagctcag gcctcgcatg ggagaagcat agcaaatcgc
     5641 caggagtaat tagcaattag taattggcac gtctgcgcac gtgttcacat tctcttgcgg
     5701 tcccacgcat agcctccgcc tctgctaaca tgcaggtgct atgtctgact gcctgttctg
     5761 caagatcatt gaaggcaa
//
LOCUS       DASQYP010000111         5481 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_25113, whole genome shotgun sequence.
ACCESSION   DASQYP010000111 DASQYP010000000
VERSION     DASQYP010000111.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 5481)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5481)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5481
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_25113"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2387)
                     /locus_tag="VE783_03620"
     CDS             complement(<1..2387)
                     /locus_tag="VE783_03620"
                     /inference="COORDINATES: protein motif:HMM:NF021778.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YncE family protein"
                     /protein_id="HYX52512.1"
                     /translation="MLLLAASTARPQTAARQNMAPDREQVLPTGMSITPYAVPGVQIQ
                     SLNPDLAAMPEFTADHPISTALSPDGHTLLVLTSGYNKNFDVKAKGIPGLSDEYVFVY
                     DVSNRVPLKQQVLHVPNTYVGLAWAPDGQRFFVSGGQDDSIHVFVRREPTAAEERNDN
                     APAGTAPLWIESTPAIALGHTRGLGFNDSETVKDKFTKPLAAGLAVSRNGKQLAVANS
                     MNDSVSLIDIAAKKVVAELDLRPGKINPAQKGVPGGEYPYGVAFKGNNKVYVSSLRDR
                     EIVVIEIRGGVPAVTARIKTRGQPAKMVMNKAQSLLFAVADNSDSVVVVDAVKDELVA
                     EIKTVTPASMASAVGSFKGANPNSLALAPDEKTLYVTNGGTNSAAVIRLERDPDDSQV
                     IGLIPTGWYPTSVTVSSDGKWIYVTNAKSPAGPNPGACRDNFNREGDRPCALKQQFVF
                     QLEKGSLAAMPVPSAAQLGTLTAQVARNDHFEARRNTVAEKELFSFLRSKIQHVIYIV
                     KENRTYDQVLGDLGRGNSDAKLNLFPEAMTPNHHALAREFVTLDNFYDSGEVSGLGWN
                     WSTAARATDFVERTIPIDYALKGIGYDVEGINRGINVAANSPQERTRTGPLDPDDLPG
                     PADVAAPDGPEDESGAGYLWDAVLRAKKTLRNYGFFVDLAHYSATKDGGPPLPLIHEP
                     SKTYTQVAFPTKQALQGVTDLYFRGFDMRFPDYWRFKEWEREFDEYVRQDNLPSLELL
                     RLPHDHFGNFAEAIDGVNTVETMIADNDYAIALVAEKIARSKYAGSTLIFIIEDDA"
     gene            complement(2467..3315)
                     /locus_tag="VE783_03625"
     CDS             complement(2467..3315)
                     /locus_tag="VE783_03625"
                     /inference="COORDINATES: protein motif:HMM:NF014336.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S1/P1 nuclease"
                     /protein_id="HYX52513.1"
                     /translation="MKKILALILLFSFTSAQLFAWGPKGHAVVADIATSRLTPQAREN
                     LHALLGDATLASIASWADEVRKEHDEAYNWHFVDIPKDAPAFSEERDCFLPNDKHKDA
                     QTDHHNCVVDRIEIFSRVLGDPTVPKDQRVQALKWLVHFVGDLHQPLHAIDTARGGND
                     IKLPVFGSPQCGDYPCNLHWTWDSLLIEHTGLTEEQYVARIDALIRSNHFEAQAGGNA
                     VDWANESHAIARTLVDPLPPAVDEAYFQANIGTVDKGLALGGLRLARLLNDALGKPQA
                     AAQGAK"
     gene            complement(3421..>5481)
                     /locus_tag="VE783_03630"
     CDS             complement(3421..>5481)
                     /locus_tag="VE783_03630"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52514.1"
                     /translation="PKIDWQINQKNHASFALNRMRWESPAGIQTQATNTFGIASFGND
                     FVKDTWGIAKLDTMLSSTLINQVRFQYGRDFEYENNQPPTPYEQANLLNSPKFTNPLG
                     LPPQVSITNGFTFGTPNFLLRPNFPDETRMQIADTVNWTRGKHTLKFGVDFSHVNDNS
                     QNLFQQFGQYSYTTLVNYFTDLNVTNGCGGKQCYSSFNQAFGPLGLEFSTNDYAFFVQ
                     DDWRIIPRLSISLGLRWEKEQLPDVFPNLVNSKIPQTASLPSDNNNFGPRVGFAYDVF
                     GNGKTIVRGGYGLYYGRVINSTIFNALLNTGSLNGQLSFTFVPGTGSPAFPAVLSSAP
                     TTSVKPNIVYFDPNFQLPQIRQSDLTLEQDIGWGTVISASYLGSFGRQLPNFVDQNLN
                     PSTNSITYRVLNGGPLSGSTFTTPVFTGPRPDANFGAKTDIFSGVISNYQALALQVNH
                     RMSHHVQFSANYTWSHALDNGVNGQTFTATNSLLNPFNLNSEYGNSIYNVPNRFVLTT
                     VMESPWKAQGWAKYLVEGWSFSPIYQIQSGLPYSAFVSGNAPSLSPTLPETSTGINGS
                     GGTNRLDIGRNTFRQPINWIADIRVSKNFKVTEKYDVELLTDFFNIANKQNVSGVNNT
                     AYFVSTGTVATPTGPQTCSAAAPCLNFNVDSAFNPLFGSTTNTNSNFVYSPRQIQIGA
                     KIKF"
BASE COUNT         1132 a         1468 c         1650 g         1231 t
ORIGIN      
        1 gcgtcgtctt cgatgatgaa gatcagagtg ctgccggcat atttgctgcg cgcgattttc
       61 tcagcgacca gcgcgatggc gtagtcgttg tccgcgatca tggtttccac ggtgttcacg
      121 ccgtcaatgg cttcggcaaa atttccaaag tgatcgtgcg gcaggcgcag aagctcgagc
      181 gatggcaggt tgtcctgacg aacgtattca tcgaactcgc gctcccattc tttaaatcgc
      241 cagtagtccg ggaagcgcat atcaaatcca cggaaataga ggtctgtaac tccctgcagg
      301 gcctgcttgg tgggaaatgc aacctgagta taagtttttg agggttcgtg aataagtggg
      361 agcggcggcc cgccatcttt tgtagcagag tagtgcgcca ggtctacgaa gaacccgtaa
      421 ttgcgcagcg tcttctttgc ccgcagcacg gcgtcccata gatagcctgc gccgctctcg
      481 tcttcgggcc catccggcgc ggccacgtcg gcagggccgg gaaggtcgtc gggatcgagc
      541 ggcccggtgc gcgttcgctc ctgcggagag ttggctgcca cgttgatgcc gcgattgatt
      601 ccttccacgt catagccaat gcccttgagc gcgtagtcaa ttgggatggt gcgctcaaca
      661 aagtccgtgg cccgcgcggc ggtgctccag ttccagccca gcccgctcac ctcgccgcta
      721 tcgtaaaagt tgtcaagggt gacgaactcg cgcgccagcg cgtgatggtt cggcgtcatc
      781 gcctcgggga acaggttgag tttggcatcg ctgttgccgc ggcccagatc tccgagcacc
      841 tgatcgtagg tgcggttctc cttgacgatg taaatcacgt gctggatctt gctgcgcaga
      901 aaggagaaga gctctttttc cgcgacggtg ttccgccgcg cttcaaaatg gtcattgcgc
      961 gccacctgcg ccgtgagcgt gccgagctgc gcggccgaag gcactggcat ggcggcgagc
     1021 gagccttttt ccaattggaa tacgaactgc tgcttcagtg cgcagggccg gtcaccttca
     1081 cgattgaaat tgtcgcggca cgcaccggga ttaggaccgg cgggagactt ggcgttggtg
     1141 acgtaaatcc atttgccgtc actgctcacg gtcaccgaag tgggatacca gccggtggga
     1201 atcagcccga tcacctggct gtcatcggga tcgcgctcca ggcggatcac cgccgccgag
     1261 ttcgtcccgc cgttggttac gtacagagtt ttctcatcgg gcgcaagcgc caggctattg
     1321 ggattcgcac ccttgaagct gccgacggca gatgccattg aggctggcgt gacagttttg
     1381 atttccgcaa caagctcgtc cttcaccgca tccaccacca cgacagaatc actgttatcc
     1441 gcgacagcga agagcaggct ctgcgccttg ttcatgacca tcttcgcggg ctggccgcgc
     1501 gtcttgatac gtgcagtcac ggccggcact ccgccgcgaa tctcaatcac cacgatctcg
     1561 cgatcgcgca ggctggaaac gtaaactttg ttgttgcctt tgaacgccac cccatacgga
     1621 tactcgccgc ccggaacgcc cttctgcgca ggattgattt ttcccggccg cagatccagc
     1681 tcggcgacca ccttctttgc cgcgatgtcg atcagcgaaa cagaatcgtt catgctgttc
     1741 gccacggcca gttgctttcc gttgcggctc acggcgagcc ccgcggctag tggcttggtg
     1801 aacttgtctt tcacggtttc gctgtcgtta aaacccagtc cgcgcgtatg accgagtgcg
     1861 atggcgggag tcgattcgat ccaaagcgga gcggtgcccg caggcgcatt gtcattccgt
     1921 tcttctgctg cagtcggctc acgacgtaca aagacatgaa tgctgtcatc ctgcccgccg
     1981 gagacaaaga agcgctgccc gtcaggcgcc cacgccagtc ccacatacgt attgggcaca
     2041 tgaagcacct gctgcttcag cggaacgcga ttgctcacgt cgtaaacgaa gacgtattca
     2101 tcggaaagtc cgggaatgcc tttggccttc acgtcaaaat tcttgttgta cccgctggtg
     2161 agcaccagca gtgtgtggcc gtcagggctg agcgcggttg agatgggatg gtcagccgtg
     2221 aactccggca tggccgcaag atccggattc agcgactgta tctgcactcc gggcaccgcg
     2281 taaggagtga tgctcatgcc ggttggcaga acctgttccc ggtcaggagc catgttctgt
     2341 cttgccgcag tctggggccg cgcggtgctg gctgcgagga gaagcaacaa aacctgcagc
     2401 aacgatgaag agattttgaa gttatgcacg gttcgtcgtc ctgaatctca ggggatcgac
     2461 ttgctcttac ttcgctcctt gcgcggctgc ctgtggcttt cccagggcat cgttcagcag
     2521 gcgggccagc cgcaatcctc ccagcgccag tcctttatcc acggtgccga tgtttgcctg
     2581 gaagtacgcc tcgtccacag cgggcggtaa gggatcgacc agcgtgcgcg cgatagcgtg
     2641 cgactcattg gcccagtcaa ccgcgttgcc gccggcctgg gcttcgaaat gattgctgcg
     2701 gatcagcgcg tcgatgcgcg ccacgtactg ctcttccgtc aatccggtgt gctcaatcag
     2761 aagtgagtcc cacgtccagt gcaggttgca gggataatcg ccgcactgcg ggctgccgaa
     2821 gacgggcagc ttgatgtcat tgccgccgcg cgccgtgtca atggcatgca gcggctggtg
     2881 cagatcgccc acgaagtgga ccagccattt cagcgcttgc actcgctgat ctttgggcac
     2941 ggttggatcg ccaagaactc tggaaaaaat ttcaatgcgg tcgaccacgc agttgtggtg
     3001 atccgtttgc gcgtccttgt gcttgtcatt gggtagaaag cagtcgcgct cttccgaaaa
     3061 ggcaggcgcg tcttttggaa tgtcgacgaa gtgccagttg taagcctcgt cgtgctcttt
     3121 gcgtacttcg tctgcccagc ttgcgatgga agcgagcgtg gcatcgccga gcagggcatg
     3181 caggttctca cgcgcctgcg gcgtcaggcg tgaagtggca atgtccgcaa ccacggcatg
     3241 accttttggc ccccaggcaa aaagctgggc ggaggtgaag ctgaataaaa gtatgagagc
     3301 aagaatcttc ttcaaagcag gacctcaggg ttcgtacctg ataaagtgcg cgccgaaaca
     3361 gtatcacatc agcaaaacgc ggcagccgca gctgccgcgt tcgggacgat ctgccgagct
     3421 ttagaacttt atctttgcgc cgatctggat ttggcgaggc gagtagacaa agttgctgtt
     3481 ggtattggtg gtggaaccga acagcggatt aaaggcgctg tccacgttga agttcaggca
     3541 cggagctgct gcactgcaag tctgcggccc agtgggagtg gcgacggttc cagtggagac
     3601 aaagtatgca gtgttattga cgcctgacac gttctgcttg ttggcaatgt tgaagaaatc
     3661 ggtgagtaat tcaacatcgt acttttccgt aaccttgaag tttttggaga cgcggatatc
     3721 agcgatccag ttgatgggct gcctaaaggt gttgcggccg atgtcgagac gattggtgcc
     3781 accggatccg ttgatacctg tcgaggtctc gggtagggtg ggcgacagac tcggcgcgtt
     3841 tccgctcacg aaggcagagt agggaagacc actctgtatc tggtaaatgg gcgagaagga
     3901 ccagccttca accagatact ttgcccagcc ctgagctttc cacggagatt ccattacagt
     3961 cgtaagcacg aaacggtttg gcacgttgta aatcgagttt ccgtattcgc tgttcagatt
     4021 gaatggattc agcaaggagt tggtagcggt aaacgtctgg ccgtttacgc cattgtccag
     4081 agcatgcgac caggtgtaat tggccgagaa ctgaacatgg tggctcatgc gatggttgac
     4141 ctgaagagcc agcgcctgat agttgctgat gacgccactg aagatatcgg tcttagcacc
     4201 gaaattggca tctggcctgg ggccagtaaa gaccggagtg gtgaaggtag aaccgctcag
     4261 cggaccgcca ttcagcacgc ggtaggtaat ggagttggtt gaaggattga ggttttggtc
     4321 gacaaagttg ggcaactgac gaccaaagct tcccagatag ctggcggaaa tcaccgtacc
     4381 ccagccgatg tcctgctcca gcgtcagatc ggattggcgg atctgaggca gctggaagtt
     4441 aggatcaaag taaacaatgt tgggtttcac tgaggtagtc ggcgcgctcg agaggaccgc
     4501 cgggaaggct ggtgatccag tgcccggcac gaaggtaaac gagagttggc cgttcagcga
     4561 tccggtattg agcagcgcgt tgaaaatcgt ggaattgatt acgcgcccat aatagagacc
     4621 gtagccgcca cgaacaatcg ttttaccgtt gccgaacacg tcataggcaa agccaacgcg
     4681 gggcccgaaa ttgttgttgt ccgaaggcag agaggccgtt tgcggaatct ttgaattgac
     4741 gaggttggga aatacgtccg gcagttgttc tttttcccaa cgcaggccga gtgaaatgct
     4801 caagcgggga ataatcctcc aatcgtcctg gacgaagaag gcgtagtcgt tggtgctgaa
     4861 ctcaagtccc aacgggccaa aagcctggtt gaaggaggag taacactgtt ttccgccgca
     4921 cccattggtc acgttgagat cagtgaaata gttgaccaga gtggtgtagc tgtactggcc
     4981 aaactgctgg aacaggttct gcgaattgtc attcacgtgg ctgaagtcca cgccaaattt
     5041 cagagtgtgc ttcccacggg tccagttcac ggtgtctgcg atttgcatgc gggtctcatc
     5101 agggaaattt ggccgcagca ggaagttcgg agtgccgaag gtgaacccgt tagttatgga
     5161 aacctgcggt ggcagaccca acggattggt gaacttgggt gagttcaaca gattcgcctg
     5221 ctcatacgga gtcggcggct gattgttttc gtattcaaaa tcgcgaccgt actggaaccg
     5281 cacctgattg atgagggtgc tgctcagcat tgtgtccagc ttggcaattc cccaggtgtc
     5341 tttcacgaaa tcattgccaa agctggcaat gccgaaggta tttgtcgcct gtgtctggat
     5401 tccagccgga gactcccagc gcatacgatt caaagcgaag gatgcgtggt tcttctggtt
     5461 gatctgccag tcgattttcg g
//
LOCUS       DASQYP010000112         3748 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_70684, whole genome shotgun sequence.
ACCESSION   DASQYP010000112 DASQYP010000000
VERSION     DASQYP010000112.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 3748)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3748)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3748
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_70684"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..325
                     /locus_tag="VE783_03635"
     CDS             <1..325
                     /locus_tag="VE783_03635"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52515.1"
                     /translation="PVFSDAARWRRVVFERYNIVGILPADGPAVRFTGPIDPKTKTMK
                     LTRRGEGQPSGEFSVDSSNPGLITLSGELDGKKIQARLRKLDEKDFLLRTRGFHWISE
                     FPFNR"
     gene            398..2008
                     /locus_tag="VE783_03640"
     CDS             398..2008
                     /locus_tag="VE783_03640"
                     /inference="COORDINATES: protein motif:HMM:NF018471.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipase maturation factor family protein"
                     /protein_id="HYX52516.1"
                     /translation="MDAWRNILRWLFLPEQSTSERPGHLLPRWVFLRCLGVIYFSAFY
                     SLLFQIKGLIGPTGILPAADYLKLIPQYYPGIQRFWFAPTLFWLSAGNGMLMLVTWLG
                     IVASVALLLNLWPRLNLVVCFVCFLSFVAAAQDFSGYQSDGMLLEAGFLSLFFAPRGL
                     RPGWGAASPPNRAARFLLLWEWFRIYFESGVVKLASGDYSWRHFTAMDDYYQNCPLPS
                     WLGWYVQHLPHRFHAFTVGFTFVAELGLVWMLFLPRRWKIICFWIVTPFQAGIILTAN
                     YTFLNYLVLCLGFILLDDKYLARFVPPKWRETLPEVSESASSIAEGPETKVRRRSELI
                     YLLLMGWALALVFYVSTAELLAMFRMATILPDEPIRLLEPFRIANRYGLFAVMTHQRY
                     EVEFQGSNDGQNWTAYPFRYKPQDPMKAPSIYAPYQPRFEWNLWFASLGPWRQNEFVV
                     QTEERLLRNDSTVLQLFSGNPFSKSPPQKMRVVLWQYWFTSMDEKRRTGAWWTRKLLG
                     EYAPGLERNQQGEVVVTPASEGFGQRGR"
     gene            2027..2860
                     /locus_tag="VE783_03645"
     CDS             2027..2860
                     /locus_tag="VE783_03645"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HYX52517.1"
                     /translation="MANPQSPDWNSFGRTNASQKWRRQSAEMGSAMTKAIVEAAHVGP
                     GMHVLDVASGSGEPAISIATQLAGTGQVIGVDVSPAPLQIASERAQQRGLANVRFQEA
                     DAHHLPFPDASFDRVTSRLGIMFFADVINALREMHRVLKPGGRATLLTWGVMGQPYFS
                     STIGTLLRVAQTGTIPEAARKMFAYGQPGLLARHLRSAGFEHAEEKFVTVEWTWPGTP
                     EEVWDYFQEVTVPFAPLLQSIPAEKREEVDAAVVKAIGEYYDGTKVNFGAKINLTTAT
                     K"
     gene            complement(2876..>3748)
                     /locus_tag="VE783_03650"
     CDS             complement(2876..>3748)
                     /locus_tag="VE783_03650"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52518.1"
                     /translation="HVYIRTGDFDAGVRTNQMAAEADRAYIKASGAQGMYPAMYYSHN
                     LHFIAMCASMNGNYAESRKAAEMLAAHVGPMVKDIPPLEGFMTIPMAVEVRFQKWEQI
                     LAAPAPDSSMKVAGVFWHFARGMALAAKGRVPDAEKEYQMVHQAADMTPPDAVFAMPV
                     NNKAKDVLTIAQNVLGAKIALAKKDFAAALPMLRQAVAIQDSLKYSEPPDWFFPVRES
                     LGAVLLMDGNAKEAEKTFREDLERNPRNPRSLFGLTEALKAQKRTYDAQFVDHQFQSS
                     WKAPNTKLRVQDLT"
BASE COUNT          726 a         1056 c         1112 g          854 t
ORIGIN      
        1 gcctgtcttt agcgatgccg cccgctggcg ccgggtggtt ttcgagcgct acaacatcgt
       61 cggcatcctg cccgctgacg gtccggccgt acgtttcacc gggccgatcg atcctaaaac
      121 aaagaccatg aagctgacgc ggcgcggtga gggacagcca tcgggagaat tttcggtgga
      181 cagctccaac ccgggcttga tcacgttgag cggagaactc gacggtaaaa aaatccaggc
      241 caggctgcga aagctggatg agaaagactt tctcctgagg acgcgcggct tccattggat
      301 cagcgaattt ccattcaatc gatagcggga gaacgcaagc ggcccgcgca tgatcgcgcg
      361 actctccgcc tgcgacttat gaaataatct gtgctccatg gacgcgtggc ggaacatcct
      421 gcgctggctg tttctgcccg agcaatccac gagtgaacgc cccggccacc tgctcccgcg
      481 ctgggttttc ctccgctgcc tgggcgtgat ctacttctcg gcgttttact ctctcctgtt
      541 ccagatcaaa gggctgatcg gacccacggg aattctcccc gccgccgatt atctcaagct
      601 cataccgcag tactatccgg gtattcagcg cttctggttc gcgcctacac tgttttggct
      661 ttcggccggc aatggcatgc tcatgctggt tacgtggctg gggattgtgg cttcagtggc
      721 actgcttctg aatctctggc cgcggctgaa cctggttgtg tgcttcgtct gtttcctctc
      781 gttcgttgcg gcggcgcagg atttctcagg ctaccagtca gatggcatgc tgctggaggc
      841 gggctttctc tcgttgtttt ttgcgccacg cggactccgg ccgggatggg gcgctgcatc
      901 accgcccaat cgcgctgccc ggttccttct gctgtgggag tggttccgaa tctactttga
      961 gtctggcgtg gtcaagcttg ccagcggaga ttactcctgg cgccacttca ctgcgatgga
     1021 cgattactac cagaactgcc cgttgccgag ttggctgggc tggtatgtgc aacatctgcc
     1081 gcacaggttt catgcgttca cggtggggtt tacgtttgtg gcggaacttg gactggtgtg
     1141 gatgctcttt ctgcctcgcc gctggaagat catctgtttc tggatcgtta ctccgtttca
     1201 agcgggaatc attcttaccg cgaactacac gtttttaaac tacctggtct tgtgtctcgg
     1261 cttcattctg ctcgatgaca aatatctcgc acgttttgtt ccaccaaaat ggagagagac
     1321 gcttcctgaa gtttcagaga gcgcttcgtc cattgcagag ggccctgaga caaaggttcg
     1381 tcggcggtcg gaactcattt acctgctgct gatgggctgg gcgcttgcgc tggtttttta
     1441 cgtgagcaca gcagagcttc tcgccatgtt ccgcatggcc acaatcctgc ccgacgagcc
     1501 cattcggctg ctcgagcctt ttcgcattgc taatcgctat ggcctctttg cggtgatgac
     1561 gcatcagcgc tatgaagtcg aatttcaggg cagcaatgac ggccagaact ggaccgccta
     1621 tcctttccga tacaagccgc aggatccaat gaaagcgccc agcatctacg cgccttacca
     1681 gccccggttt gagtggaatc tttggttcgc gtcgctcggt ccctggcgac aaaatgagtt
     1741 cgtcgttcaa accgaggaga ggctgctgcg caatgattcc accgtgctgc aactcttctc
     1801 cggtaatccg ttttcaaagt caccaccgca gaagatgcgc gtggtgctct ggcagtattg
     1861 gttcaccagc atggacgaaa agcgacgtac aggagcatgg tggacgcgca aattgctggg
     1921 cgaatatgcg cctgggctcg agagaaatca gcagggtgag gttgtggtaa cgccggcgtc
     1981 tgaagggttt gggcaacgcg ggcgctagcg atttagaatc gagttgatgg ccaatccaca
     2041 atcaccagac tggaacagct tcgggcggac gaatgccagc cagaaatggc gcaggcagtc
     2101 ggctgagatg ggcagcgcca tgacgaaggc gatcgtggaa gccgcccatg ttgggccggg
     2161 catgcatgtt cttgacgtcg ccagcggaag cggtgagccg gccatttcaa ttgccacgca
     2221 gctcgccgga accggtcagg tgattggcgt agatgtctca ccggcgccgt tgcagattgc
     2281 cagcgaacga gcgcagcagc gtgggctggc caacgtgagg tttcaagaag cagacgctca
     2341 ccatctgcct tttccggatg cgagcttcga tcgcgtaact tcccggctcg ggatcatgtt
     2401 ctttgctgac gtgatcaacg cgctgcggga gatgcatcgg gtgctgaagc cgggcggccg
     2461 tgcgacgctt ctgacttggg gagtgatggg gcaaccgtat ttttccagca ccattggcac
     2521 gctgcttcga gtagcgcaga cgggcaccat tcctgaagca gcgcggaaga tgtttgctta
     2581 cggtcagccc gggctcctcg cgcgccatct gcgcagcgct ggtttcgagc acgcggaaga
     2641 gaaattcgtg accgtggaat ggacctggcc cggaactccg gaagaggtct gggactattt
     2701 ccaggaagtc acagtgccgt ttgcaccgtt gcttcaatcg atcccggcgg aaaagcggga
     2761 agaagtagat gccgccgtag taaaggcgat cggcgaatac tacgacggca caaaggtgaa
     2821 cttcggcgca aaaatcaacc tgaccacggc gacgaagtaa gaaactggaa ctcgcttagg
     2881 tcaggtcttg gacgcgcaac ttcgtattcg gcgccttcca tgacgactgg aactggtgat
     2941 ccacgaactg cgcatcatac gtgcgttttt gcgcctttaa cgcttcggtc aggccaaaca
     3001 gcgagcgcgg attacgcggg ttgcgctcca ggtcttcacg aaacgttttc tccgcttctt
     3061 tggcgttgcc gtccatcagg agaacagcgc caagcgattc ccgcaccggg aaaaaccagt
     3121 ccggcggttc ggagtatttg agggaatcct gaatggcaac ggcctgccgc agcatgggga
     3181 gagcggcagc gaagtctttt ttcgccagcg caatctttgc tccaagcacg ttctgcgcaa
     3241 tggtgagcac gtccttggct ttattgttca ccggcatggc aaacaccgcg tccggcggcg
     3301 tcatatcggc cgcctgatgc accatctggt attccttctc cgcatcaggt acgcggcctt
     3361 tagcagctaa cgccatgccg cgggcgaagt gccagaatac tccggcgact ttcatggaag
     3421 aatcgggcgc cggcgcggca agaatctgtt cccacttctg gaaccggact tccaccgcca
     3481 tgggaatggt catgaagcct tcgagcggcg gaatgtcttt caccatgggg ccgacgtgcg
     3541 cggccagcat ctctgcggcc ttgcgcgact cagcatagtt tccgttcatg ctggcgcaca
     3601 tggcaataaa gtgcaggttg tggctgtaat acatggccgg atacattccc tgcgcgccgc
     3661 tcgccttgat gtaggcgcga tcggcttcag cggccatctg gttggtcctt actccggcat
     3721 caaagtcgcc ggtgcggatg taaacatg
//
LOCUS       DASQYP010000113         3335 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_279290, whole genome shotgun sequence.
ACCESSION   DASQYP010000113 DASQYP010000000
VERSION     DASQYP010000113.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 3335)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3335)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3335
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_279290"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..351
                     /locus_tag="VE783_03655"
     CDS             <1..351
                     /locus_tag="VE783_03655"
                     /inference="COORDINATES: protein motif:HMM:NF044955.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52519.1"
                     /translation="IFPLAFFIFPATTIGAFALPQYFLFIVGLVLCSVINSVFLVLMR
                     APTRAGQEVLQHLAGFREFLVRVEQDRMERLNTPEEKTRVMREFMAYAVALGVREGWG
                     DRMASAFSDAAVQR"
     gene            complement(481..1104)
                     /gene="lexA"
                     /locus_tag="VE783_03660"
     CDS             complement(481..1104)
                     /gene="lexA"
                     /locus_tag="VE783_03660"
                     /EC_number="3.4.21.88"
                     /inference="COORDINATES: protein motif:HMM:TIGR00498.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006282 - regulation of DNA repair
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional repressor LexA"
                     /protein_id="HYX52520.1"
                     /translation="MAITKRQREVYDYIHDFVVKNGYSPSFEEIGHGLGLSSLATVHK
                     HVTNLEKKGLLKRDYNRSRSIDVLPIRGLFRRAPQKSAGDVSLPLMGRIAAGQPIEAV
                     ENPESISLGDITRSKDVFVLQVKGESMKDEHIVDGDYVLVEKGNTARDGEIVVALVEG
                     SDATLKRIYKEGSNIRLQPSNAAMKPIVVPAKSVSVQGRVIGVLRKY"
     gene            complement(1198..2370)
                     /locus_tag="VE783_03665"
     CDS             complement(1198..2370)
                     /locus_tag="VE783_03665"
                     /inference="COORDINATES: protein motif:HMM:NF012488.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class V-fold PLP-dependent
                     enzyme"
                     /protein_id="HYX52521.1"
                     /translation="MTDTLLRFRSEFPILERTTYMISNSLGAMPRGVYESAKAYCDIW
                     ASRGVRAWEEEWWTMAQEVGDAIGAIMNAPSGTVSLQLNVTSCQAVIASCFDFSGRRN
                     KIVYSDMNFPSIMYFWEAQRARGARVHMVKTDDGVHVPTERILDAIDEETLLVPISHV
                     VFRSSYIKELQPIIEKAHRVGALVVVDAFQSLGNVPLNVQALNADFAVGGVLKWLCGG
                     AGTSYLYVRPDLAKKLQPTITGWFAHENPFDFEIGPTRYAEQPFRFMQGTSNVPGFYT
                     AMPGLKIIREAGVENIRAKSKIMTARLIELADQRGWRVNAPRDAERRGGTVAIDMPNA
                     KEVCAELLRRDVLVDFRPKAGVRFSPHFYNTLEEIDRAIQTVDQILSTMGVAAGAR"
     gene            2518..>3335
                     /locus_tag="VE783_03670"
     CDS             2518..>3335
                     /locus_tag="VE783_03670"
                     /inference="COORDINATES: protein motif:HMM:NF024910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="APC family permease"
                     /protein_id="HYX52522.1"
                     /translation="MKKATSGSSRKLGLLSLAAATYFMVSGGPYGVEELVQDSGYRTA
                     LLIIFLIPLIWALPTGLMVGELSAALPEEGGFYVWVRRAMGPFWGFQEAWLSLVASIF
                     DMAIYPTLFVAYLGRLFPATTAGWRGVAIAGALVVVCMCWNLFGAKAVGESSVVVGIL
                     LLSPFALVTIFALTKHVNPVAVPGVKGDLLGGILVGMWNYMGWDNAATVANEVENPQG
                     NYPRVMLLALLAIFLSYALPVAAVWSTHIPPDVWSNGSWAAIATMVVGPWLGTIL"
BASE COUNT          670 a          942 c          995 g          728 t
ORIGIN      
        1 atctttccgc ttgccttctt catttttccc gcgacaacca tcggcgcgtt cgcactgccc
       61 cagtattttc tgttcatcgt gggcctcgtg ctgtgctcgg ttatcaacag cgtgttcctg
      121 gtgctgatgc gcgcgcctac cagggccggg caggaggtgc tccagcacct ggccggcttc
      181 cgcgagttcc tggtgcgggt ggagcaggac cgcatggagc ggctcaacac accagaagaa
      241 aaaactcgcg tgatgagaga gtttatggct tacgcagtgg cgctgggcgt gcgtgaaggc
      301 tggggagaca gaatggcttc ggcgttctcc gatgccgccg tgcagcgtta agcagattgg
      361 gtaatttcgt aaattggtaa gttggtaatt tagatcaagc gggcctgatc agcgaggcgt
      421 gtaccgccga tcagacccgt ggcgaattac caaatcacaa attactcaat cacccaattt
      481 ctagtacttg cgcagtacac cgatgacgcg tccctgcacc gaaacggatt ttgccggcac
      541 cacgattggc ttcatggccg cattggaagg ctggagccgg atgttggagc cttccttata
      601 aatccgcttg agcgtcgcat ccgatccttc caccagagcc accacgattt caccatcgcg
      661 cgcggtgttg cccttctcca ccagcacgta atcgccgtct acaatgtgct cgtctttcat
      721 gctttcgcct ttgacctgga gcacgaaaac atcttttgaa cgggtgatat cgccaagaga
      781 aatgctctcc gggttctcaa ccgcttcaat gggctggccg gctgcaatgc gccccatgag
      841 aggcaaagaa acgtccccag cggatttctg cggcgcgcga cggaaaaggc cgcggatggg
      901 aagaacgtca atggagcggc tgcggttgta gtcgcgcttg agcagccctt ttttctccag
      961 gttggttaca tgtttgtgca ccgtggcaag agagctgagc cccaacccgt gaccaatttc
     1021 ttcaaaggaa ggagagtagc cgttcttgac cacaaaatcg tggatgtagt cgtacacttc
     1081 gcgctgtcgc ttggtaattg ccataagcga attatttgcg aactggcggc gaattgtcaa
     1141 ctgaaattgt gcaaacaggc cacgaggaac cctatgcagc aacttctccc catcgcatca
     1201 tcgggccccg gcggcaacgc ccatggtgct caaaatctgg tcgacggtct gaatagcgcg
     1261 atcaatctct tccagggtgt tgtaaaaatg cggcgaaaaa cgaacccctg ccttggggcg
     1321 gaaatccacc agcacgtcgc gccgcagcag ttcggcacag acttccttcg cgttcggcat
     1381 atcgatggct acggtcccgc cgcgacgctc agcgtcacgc ggggcgttca cacgccagcc
     1441 gcgctggtca gccaactcga tcagacgagc cgtcatgatc ttggacttgg cgcggatgtt
     1501 ctcgacgccg gcctcacgaa tgatttttag acccggcatc gcggtataaa agccggggac
     1561 gttcgaggtg ccctgcatga agcggaacgg ctgctcggca tacctggtgg gaccgatctc
     1621 gaagtcaaat ggattctcgt gggcgaacca acccgtgatg gtgggctgca gctttttcgc
     1681 gagatcgggg cgcacgtaaa gatatgaggt tccggcgccg ccgcagagcc acttgagcac
     1741 gccaccgacg gcgaagtcag cgttgagcgc ctgcacgttc agcggaacgt tgccgagaga
     1801 ctggaatgca tccaccacta cgagcgcgcc gacgcggtgc gctttttcga taatcggctg
     1861 cagttccttg atgtaagaac tgcggaagac cacgtgagaa ataggaacga gcagtgtctc
     1921 ttcgtcgatt gcgtccagaa tgcgctcggt cggcacatgg actccatcat ccgtcttgac
     1981 catgtggaca cgggcgccgc gagctcgctg ggcttcccag aaatacatga tcgacgggaa
     2041 gttcatgtca ctgtagacga tcttgttgcg gcgtccgctg aaatcgaagc agcttgcgat
     2101 tacggcctgg caactcgtta cgttaagctg caggctcacg gtgcctgacg gcgcattcat
     2161 gatggcgccg attgcgtcgc cgacttcctg cgccatggtc caccactcct cttcccacgc
     2221 gcgcacgccg cggctggccc atatgtcaca gtaggctttc gctgactcat agacgccgcg
     2281 cggcatggcg cccagcgagt tactgatcat gtaggtggta cgttcgagaa tggggaactc
     2341 ggaacggaag cgaaggagcg tgtcggtcat gcggaaaagt ttatcgcaga atcgccgtaa
     2401 gcgccgtaag cgccgaaatc gagcgaccag aaacaatttt gttgcggaac aacagatcgt
     2461 agttcgctcc cgggcacaag atgctatatt tcgcatcatc aagatgaaaa acacgagatg
     2521 aaaaaggcca cttctggttc ctcgcgcaag ctgggactgc tttcgcttgc cgcggcaact
     2581 tacttcatgg tctccggcgg cccgtacgga gttgaggaac tggtccagga ctcaggctac
     2641 cgcacagccc tgctgatcat ctttctgatc ccgctgatct gggcgctgcc caccggactg
     2701 atggtgggcg agctctcggc tgcgctgccg gaagaaggcg gcttttacgt atgggtgcgg
     2761 cgcgccatgg gaccgttttg gggatttcag gaagcgtggc tctccctggt ggccagcatc
     2821 tttgacatgg caatctaccc gactctgttc gtcgcctacc tgggccggct gtttccggcg
     2881 acgaccgcag gctggcgagg cgtggcgatc gccggcgcgc tggtggtggt ctgcatgtgc
     2941 tggaatttgt tcggtgcgaa ggccgtgggt gaaagctctg tggtggtagg catcctgctg
     3001 ctcagcccgt ttgcgctggt cacgatcttc gcgctcacga agcatgtgaa tcctgtcgca
     3061 gtgccaggag tcaaaggcga tctgcttggc ggaattctgg tgggtatgtg gaactacatg
     3121 ggctgggaca acgccgccac cgtggccaac gaggttgaga atccacaggg caattatccg
     3181 cgcgtcatgc tgctggcgct gctcgcaatt ttcctttcat acgcattgcc cgtagcggcg
     3241 gtgtggtcca cgcacattcc gccggacgtc tggagcaatg gaagctgggc ggccattgcc
     3301 actatggtgg ttgggccgtg gctgggcacc atcct
//
LOCUS       DASQYP010000114         2350 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_71134, whole genome shotgun sequence.
ACCESSION   DASQYP010000114 DASQYP010000000
VERSION     DASQYP010000114.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 2350)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2350)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2350
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_71134"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..570)
                     /locus_tag="VE783_03675"
     CDS             complement(<1..570)
                     /locus_tag="VE783_03675"
                     /inference="COORDINATES: protein motif:HMM:NF024491.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospholipase D-like domain-containing protein"
                     /protein_id="HYX52523.1"
                     /translation="MHVSHTFFVIAVIAIGWQLFLLLMALFEPALRYKIECFEAPPID
                     SDEFLCTLEALTDAQVNHHNTLEVLTNGEQFYEAELECIRRAQQSINLEAYIFQRGEI
                     ANRFIAALAERAAAGVKVNVIMDGVGSLTTSRSYCRRLLNAGGKLEFYHPFSWKSLAR
                     FNNRTHRELLIVDGRVGFIGGAGIADHWLL"
     gene            complement(653..1327)
                     /locus_tag="VE783_03680"
     CDS             complement(653..1327)
                     /locus_tag="VE783_03680"
                     /inference="COORDINATES: protein motif:HMM:NF015506.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0031992 - energy transducer activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="energy transducer TonB"
                     /protein_id="HYX52524.1"
                     /translation="MWTFLSRDARDSPFVLCEEQGRARGGVSGGISLVIHGVVLAILC
                     WPALPGFIKPQFVARGEAGSAAPAVVALYLPSELAQPSTERRNTVTLPATPKAKSKPA
                     AKKRHNVLEAEKTTDNREIGSRSGSALDGAADGDEVKPALPVVFADPRIARWELPNGM
                     TGDVIVEITIDERGTVIDERLLQGLGHGIDERVIAAVREWQFRPATRNGVPVPSKHDV
                     HFHFPS"
     gene            complement(1452..>2350)
                     /locus_tag="VE783_03685"
     CDS             complement(1452..>2350)
                     /locus_tag="VE783_03685"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR01930.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006635 - fatty acid beta-oxidation
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="thiolase family protein"
                     /protein_id="HYX52525.1"
                     /translation="CGSSQQAIHFAAQGVLAGSYDVAIACGVESMTRVPMGSAAAGPG
                     KPYGPAMLRRYNATSFNQGISAEMMAEKWQLSRRSLDEYSLESHRRAARASEQCHFSK
                     EVLPIEVSNGSSTSTVKRDEGIRADTTLEKMATLKTVFKADGVITAANSSQITDGAAA
                     VLIMERRKAESLGLKPMARFVEFALAGEDPVLMLSAPIPATRRILQRAGIKLADIDRI
                     EINEAFASVVLAWQKELDADLSRVNVNGGAIALGHPLGASGARLMATLVHELARSGGR
                     YGLQTMCEGGGMANATIIERLN"
BASE COUNT          478 a          771 c          621 g          480 t
ORIGIN      
        1 cagtagccaa tgatcggcga tgcctgcgcc gccgatgaaa cctacccggc catcgacaat
       61 cagaagctca cggtgagtgc gattgttgaa acgcgccagg cttttccagc tgaatggatg
      121 gtaaaactcc agcttgcccc cggcattgag cagccggcgg cagtagctgc gcgacgtagt
      181 gaggcttccc actccgtcca tgatcacgtt caccttcaca cctgcggcgg cgcgctccgc
      241 gagagctgca atgaacctgt tcgcaatctc tcctcgctgg aaaatgtagg cttccagatt
      301 gatactctgc tgcgcccggc gtatgcattc gagttctgct tcatagaact gctcaccatt
      361 ggtcaacacc tccagcgtgt tgtggtggtt cacctgagca tctgtgagcg cctccagggt
      421 gcaaaggaac tcatcagaat cgattggcgg cgcttcaaag cactcgatct tgtaacgtaa
      481 cgccggctca aagagcgcca tcagcagcaa aaagagctgc cagccaatgg caatgacggc
      541 aataacgaag aaagtgtgcg agacgtgcat tgggcccaca gcggacaacc aattattgga
      601 tgcggtcaaa aagccatgcg cttttagccg agcttaagac gttgagagat tgtcagcttg
      661 ggaagtgaaa gtgcacatca tgttttgatg gcacaggcac tccgttgcgg gttgctggtc
      721 gaaactgcca ctcgcgcacc gcggcgatca cgcgctcatc aatgccgtgg ccgagcccct
      781 gcagcagtcg ctcatcgatc acggttccgc gctcatcgat tgtaatctcc acaatcacat
      841 cgccggtcat gccgtttgga agctcccaac gcgcaattcg cggatcagcg aagaccacag
      901 gcagcgcagg tttaacctca tctccatcgg ctgcgccatc cagggcggag ccgctgcgcg
      961 agccgatctc acgattgtcc gtggtcttct ccgcttcaag cacattgtgc cgcttctttg
     1021 ctgccggttt cgacttcgcc ttcggcgtag ccggcagcgt caccgtgttt cggcgctctg
     1081 ttgacggctg cgccagctcg ctgggaaggt acagcgccac cacggccggc gcggcagagc
     1141 ccgcctcacc gcgagccaca aactgcggtt tgatgaagcc cggaagcgct ggccagcaca
     1201 ggattgccaa aactacgccg tggatcacca atgagattcc gccggagaca ccaccgcgag
     1261 cgcgcccttg ctcctcgcac agtacgaagg gcgaatctct cgcatcgcgg ctaaggaacg
     1321 tccacatact tcttccgctt cttcttagac gtacaacctc attctagggt caacgccctc
     1381 agcgccagga acaccaaagg gcaggccaaa ctgcgccatc cggaacccgc atcccaaaac
     1441 atacctcact gttaattcaa cctctcgatg atggttgcat tggccatacc gccgccttcg
     1501 cacatcgtct gcaaaccgta ccgaccgcca gatcgagcca gttcgtgcac cagagtcgcc
     1561 atcagccgcg caccgctggc gccaagcgga tgacccaacg cgatcgcccc gccatttaca
     1621 ttcacgcgcg aaagatcggc gtccagctct ttctgccatg ccagcaccac gctggcaaag
     1681 gcttcgttga tttctatccg gtcaatatcc gccagcttta tgcccgcgcg ttgcaaaatg
     1741 cgacgcgtgg ccggaatcgg cgccgatagc atcagcaccg gatcctcccc tgcaagtgca
     1801 aactccacaa accgcgccat tggcttcagg cccagcgatt ctgccttgcg gcgttccatg
     1861 atcagcacgg ccgctgcgcc gtcagtgatt tgcgaagagt tggccgcggt gatcacgccg
     1921 tccgctttga acacggtctt cagcgtcgcc atcttttcca gagtcgtatc tgcgcgaatt
     1981 ccttcgtcgc gcttcaccgt gctcgtactg gacccgttgc ttacctcaat gggcagaact
     2041 tccttcgaaa aatggcattg ctcactggcc cgtgccgcgc gacgatgact ctccaggctg
     2101 tattcatcca ggctgcggcg gctgagctgc catttttccg ccatcatctc cgcgcttatt
     2161 ccctggttga agctggtagc gttgtagcga cgcagcatcg ccggcccgta cggcttgccc
     2221 ggtcccgcag cagcggagcc catcggtacg cgcgtcatgc tctccactcc gcacgcaatc
     2281 gccacgtcat agctgcccgc gagcacgcct tgcgcggcaa agtggatcgc ctgctggctc
     2341 gacccgcact
//
LOCUS       DASQYP010000115         3823 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_259080, whole genome shotgun sequence.
ACCESSION   DASQYP010000115 DASQYP010000000
VERSION     DASQYP010000115.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 3823)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3823)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3823
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_259080"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..659
                     /locus_tag="VE783_03690"
     CDS             <1..659
                     /locus_tag="VE783_03690"
                     /inference="COORDINATES: protein motif:HMM:NF012546.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="prolyl oligopeptidase family serine peptidase"
                     /protein_id="HYX52526.1"
                     /translation="QYLASLGYVVLSVNYRLGIMYGRAFREPANAGWRGSSEYKDVVA
                     GAKYLQSLNYVDRSRVGIWGGSYGGLLTALGLARNSDIFSAGVDFHGVHDWSMFLNNW
                     ISGAAMAPDFKEAVKLAFDSSPVASVPQWKSPVLLIHGDDDRNVPFEQTTDLVQRLRK
                     QNVRFEELILPDEIHDFLLWKTWVNGYRATAEFFNREYRLGGAAKPGEPAAAPGSKGH
                     "
     gene            936..2027
                     /locus_tag="VE783_03695"
     CDS             936..2027
                     /locus_tag="VE783_03695"
                     /inference="COORDINATES: protein motif:HMM:NF025910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HYX52527.1"
                     /translation="MVLAALILAAVLVYLGTYRLAASNRSIQASVGRSWFKQGRELLQ
                     TGKPDSAVKAFRKASVNDRENRQYSRWLASALEADGRNQEARELLLQIRESVPEDPEV
                     NLELARISARQSDIPTAVRYYQNALYGIWTGEDIDRRRDNVRRELIDVLLQQGTPQQA
                     LPEILALANHLPATVANENEVGKLLLRAGAPRRALDDFQWVLRHDRHDATALAGAAQA
                     WFEVGDYARAKRELSLISARTPEESETLKLASIIVDLDPTGPLSLAERSRRLVTALDL
                     AGTGLAGCLNRSPASPNAAALQQSQQTIQSLKSQISAKALENQPDLVTSSMELISQSE
                     DLISKSCGPVAGSDKALLLLAEKVRGAEQ"
     gene            2024..3763
                     /locus_tag="VE783_03700"
     CDS             2024..3763
                     /locus_tag="VE783_03700"
                     /inference="COORDINATES: protein motif:HMM:NF012861.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005247 - voltage-gated chloride channel
                     activity [Evidence IEA];
                     GO_process: GO:0006821 - chloride transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chloride channel protein"
                     /protein_id="HYX52528.1"
                     /translation="MIDRLLEQLRIRDRQMFLLATVCIGVLAGLLAVLFTLSIERLSF
                     FLFGMAPSRERLMLVPPAISLVTGVLLAKYFPDCRGSGVPQTEAAYHLANGRIPGRVP
                     IGKFLTGVLCVGSGHSMGREGPSVQIGAGLASVVGRWLRLSPERIQALVPIGAAAALS
                     AAFNTPVSAVIFALEEIIGDMNAGIIGPAVIASVSSVIVERSILGNHPLFRVPQYHLL
                     KPEELLWYALLGLVGGIISLMFCKGLLWLRRLFARLPRSSVWFQPAIGGLIIGIILIF
                     FPEVMGVGYEYVDQALSGGLALKLLILLCGAKLVATIISYASGNAGGIFAPSLYLGAM
                     AGGAMGTIVHRFAPLSSADPGAYALVGMGTLFAGIIRAPMTSVFMIFELTQDYQILVP
                     LMVANLISFMISRKFQAKPIYHALLEQESIYLPGMEGRLSVSGARAGNMMTQKYVLVS
                     DSVTVGAALDRIKRQETPGDNVLVGPENFPVAWVRREKLEQAALNGASEQPALSLADR
                     AQFAYVYPDQSVDYALQQLSVSAGPLLVRNRSGHRLEGIITRQSVMDFLDRDVRPAMK
                     LDPESVQGVTFEP"
BASE COUNT          763 a         1082 c         1106 g          872 t
ORIGIN      
        1 atcagtacct ggccagcctc ggttacgttg tcttgtcagt gaactaccgg ctcggcatca
       61 tgtacgggcg agccttccgc gaacccgcca acgcgggctg gcgtggttca tcggagtaca
      121 aggacgtcgt ggcgggggcc aagtacctcc agtctctcaa ctatgttgat cgcagccgag
      181 tcggaatctg gggcggatca tatggaggct tgctcacagc gcttggcttg gcccgcaatt
      241 cagatatctt ctccgccgga gtggattttc acggcgtgca cgactggtca atgttcctga
      301 acaactggat ttccggagcg gcaatggcgc ccgatttcaa ggaagcagta aaactcgcgt
      361 tcgattcctc accggtcgcg tccgtcccgc aatggaaatc tccggttttg ctcattcatg
      421 gcgatgacga ccgtaatgtc ccattcgagc agaccacaga ccttgtccag cgactccgca
      481 agcagaacgt aagattcgaa gagctgattt tgccggacga gattcatgac ttcctgttgt
      541 ggaagacctg ggtgaacggg taccgggcta ctgcggagtt ttttaaccgc gaatacaggc
      601 tgggcggagc cgccaaaccg ggtgagccgg ccgcagcgcc cggatcgaaa ggccactgaa
      661 ctgccccttt cgcacggcga cgcgcgaaaa cagtcgtagt acgataaaat gttgtgagaa
      721 gctcatcacg gctaaatttg tacataaggc acaccccctt gcctgcaggc tcatcgaaag
      781 agagtagacc tgcggcagag agataaccgg ctcgaatacc tttgagtagt gaacctacaa
      841 tcaactgtcc tgagtgcgga agccgcctga ccggatcaga tgggtgcccg aactgttccc
      901 ggcgacttgg gctccgcctt tttcaacggg agatcgtggt tctggcagca ctgatccttg
      961 cggccgtact ggtctatctc ggcacatacc ggcttgctgc cagcaatcgg tcaattcagg
     1021 cttccgttgg tcgttcatgg ttcaagcagg gcagggaact cctccaaaca ggtaagccgg
     1081 attcggcagt gaaggcgttc cgcaaagcca gcgtcaacga tcgtgaaaac cgccaatact
     1141 cccgctggct ggccagcgcc ctggaagcgg atggccgcaa tcaggaagct cgcgagctgc
     1201 tgttgcagat ccgtgagtcg gtgccggaag atcctgaagt caacctggaa ctggcgcgga
     1261 tatctgcccg ccagagtgac attcccacgg ccgttcgcta ttaccagaat gcgctatacg
     1321 gaatctggac tggcgaagac atagatcggc gtcgggacaa tgttcgccgc gaactgatcg
     1381 atgtacttct ccaacagggc actccccagc aggcattgcc tgaaatcctg gccctggcca
     1441 atcacctccc ggcgacggtg gcaaatgaga atgaggtggg taaactcctg ctccgggccg
     1501 gtgccccaag gcgcgccctg gatgatttcc agtgggtgct ccggcatgac aggcatgatg
     1561 ccaccgctct cgccggggcg gcgcaggcct ggtttgaagt gggcgactac gccagggcga
     1621 aaagagagct cagcctgatt tccgctcgta cccccgagga aagtgaaacc ctaaagcttg
     1681 ccagcatcat tgttgatctg gaccccaccg ggccactgtc attggcggag cgcagcaggc
     1741 gcctggtgac tgctcttgat ctggcgggaa ccggacttgc gggttgtttg aatcgcagtc
     1801 ctgcttcgcc taatgctgct gccctgcagc aatcgcaaca gaccatccag agcctcaaat
     1861 cgcagatttc ggccaaagcc cttgagaacc aaccagacct tgttacaagt tcaatggaat
     1921 tgatttctca atcggaggac ctgatctcca aatcttgcgg cccggttgcg ggctcagaca
     1981 aagcccttct cctgctggcg gaaaaagtgc ggggtgccga acagtgatcg accgtttgct
     2041 cgaacaactt cgcatccgcg accgtcagat gtttctgctc gcaactgttt gcattggtgt
     2101 gcttgcgggc ctacttgcgg tgctgtttac gctctcaatt gagcggctct cgtttttttt
     2161 gttcggcatg gctccttcac gcgaacggct aatgctggtc ccaccggcca tcagcctggt
     2221 caccggcgtt ctgctggcaa agtatttccc tgactgtcgc gggagcggtg tgccgcagac
     2281 ggaagcggct taccatctcg ccaacggacg catcccgggg cgcgtgccca ttgggaaatt
     2341 ccttactgga gtgctgtgcg tcggctcagg acattccatg ggcagggaag gcccatcagt
     2401 ccaaatcggc gcagggctcg cctctgtcgt gggtcgctgg ctcagattgt ctcccgaacg
     2461 gattcaggcg ctcgttccta tcggcgcggc cgcggcgctc tcggctgctt tcaatacccc
     2521 ggtttcggcc gtgatcttcg cgctcgaaga aatcattggt gacatgaatg ccggcattat
     2581 tgggccggca gtcattgcct cggtctcttc agtaatcgtt gagagatcga tccttggcaa
     2641 ccatcccttg ttccgcgttc cgcaatacca cctgctcaaa cctgaggaac tgctgtggta
     2701 tgcgctgctg gggctggtgg gtggcatcat ctcgctcatg ttctgtaagg ggttgctttg
     2761 gttgcgcagg ttgttcgcca ggctgccgcg ttcctcagta tggttccagc ccgcaatcgg
     2821 cggcctgatt atcgggatta tcctcatctt cttccctgaa gtaatgggcg taggttacga
     2881 gtatgtcgat caggctctga gtggcggcct ggctttgaag ctgctgatcc tgttgtgcgg
     2941 cgccaagctg gtggccacca tcatctctta tgcctccgga aacgcgggcg gtatctttgc
     3001 gcccagtctt tatctgggtg ccatggccgg tggtgccatg ggaaccattg ttcatcgctt
     3061 tgcgccgctt tcatccgccg atcccggtgc atacgcactg gttgggatgg gtactctgtt
     3121 tgccggcatt atccgcgcgc cgatgacctc agtcttcatg atctttgagc tgacgcagga
     3181 ttatcagatt ctggtgccgc tgatggtggc aaaccttatc agtttcatga tttcaagaaa
     3241 gttccaggct aagcccattt atcacgcgct gcttgagcag gagtcaattt acctgccggg
     3301 catggagggg cggctttcag ttagcggtgc gcgcgccggg aacatgatga cgcaaaagta
     3361 cgtcctcgtt tcggacagcg tcaccgtagg cgcggccctt gaccgaatca aacggcaaga
     3421 gactccagga gacaacgttt tggtaggtcc ggaaaacttt cccgtggctt gggtgagacg
     3481 cgagaagctt gagcaggcgg ccctcaacgg cgcttcagaa cagcctgcac tatcgctggc
     3541 agatcgcgca cagtttgctt atgtgtatcc ggaccagtcc gtggactatg ccttgcaaca
     3601 gttgagcgtt tcagcaggac cactgcttgt gcgaaatcgg tctggtcatc gcttagaagg
     3661 gatcattacc cgccaaagcg ttatggattt tcttgatcgc gatgttcggc cggcaatgaa
     3721 acttgatcca gaatcggtgc agggcgtgac tttcgaaccc tgaaacagct tacctctcca
     3781 aaaacaatgg gcgcgttgag gaacgcgccc acggatcacc ttc
//
LOCUS       DASQYP010000116         8163 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_237263, whole genome shotgun sequence.
ACCESSION   DASQYP010000116 DASQYP010000000
VERSION     DASQYP010000116.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 8163)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8163)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8163
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_237263"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            49..174
                     /locus_tag="VE783_03705"
     CDS             49..174
                     /locus_tag="VE783_03705"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52529.1"
                     /translation="MAGLSLAADRLTKTGAGFSLAMEGRSLVAAEIGQIAPELPG"
     gene            226..744
                     /locus_tag="VE783_03710"
     CDS             226..744
                     /locus_tag="VE783_03710"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52530.1"
                     /translation="MLYRNLCLIAFILTALAAQSQTSSNQTASMAPSCLAPNCADVNP
                     SKAPVFPTHQVQGQWVTEDFKSTDSSVSCSVVKYDNSQPKPILHLLCPGPQVFAPLRV
                     HLSLTWKQISDIPAKLQHMLVRTDALVKFKSKKGESKAELTMSDPQAGGSSREWVSFN
                     SIEVGLVLPNEK"
     gene            complement(1014..1325)
                     /locus_tag="VE783_03715"
     CDS             complement(1014..1325)
                     /locus_tag="VE783_03715"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52531.1"
                     /translation="MQKLIRGTLICLMLAIVAAANLVSFSIDADGDAATPPVTVDFHF
                     VAPAQKSVPTHTALKLPVPIAALTALEPLKAFHWQSQFAGYIESPIIPAISQSSLPLL
                     C"
     gene            1606..2097
                     /locus_tag="VE783_03720"
     CDS             1606..2097
                     /locus_tag="VE783_03720"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52532.1"
                     /translation="MPPQNANSPSSAPLPLFRPEPIAARLRMEGEVLLVRPFSLSLLT
                     ALALAITTAAIACLLLIRVPHVQRVPVQVFAAPASNHDVNLFLPTGITPGVSQGDRIP
                     LSFGHRHSVVAVVESSTSGNNSLKIVASIPEIDIELPGSASAEIPAGSRSLLNWLLHR
                     EGE"
     gene            2094..4289
                     /locus_tag="VE783_03725"
     CDS             2094..4289
                     /locus_tag="VE783_03725"
                     /inference="COORDINATES: protein motif:HMM:NF012869.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptidase domain-containing ABC transporter"
                     /protein_id="HYX52533.1"
                     /translation="MSQSQMRGLLRSLLSHSVLPMIFQTEATECGLACLAMVANYHGL
                     QMDLATLRERCSISLRGSTLGQLINFASRLEFSSRPLRIELEDLPYLQTPCILHWDMT
                     HFVVLKRATEKHIVIHDPARGIRKLSYHEASDHFTGVALELTPTPAFAPRKESHQLRL
                     RDLVGRIVGLRGAMVQVAALAVALELFAIVSPLFLQIAVDKAASASRATLLASLGLGF
                     MFLVVLQSFLAGLRSWATLYFGTAIKLQWFANLFSHLLRLPVSFFERRYFGDLISRFD
                     GAEVIQRTLTNNFIEALLDGTVSLFVVVVMFLYSARLGVIVIGGLVIYAAVRAFSYRP
                     LRDRTEEQITRAARQQSHFLETLRGIRTIKVFGREDSRKSNWMNLLVANVNAQVASER
                     LSIFVRSANLLIFGLQTVAVVWAGVVLVQQNRLTVGMLFAFVAYSEQFKLRMITLVDR
                     AFEFRMLSLQADRLSDIAFAKPESLAEASEPVAPFSAGIEVRSLSFRYSESDPWLLRE
                     IGLQIRPGECVALTGPSGAGKSTLLKLMAGLLVPEQGDVIIAGHSVCTSRAAVSAKVG
                     FVLQDDSLFAGTVASNIAFSSDVPELDRVRECARLACLEEDIANLPMGYETLIGEMGS
                     ALSGGQQQRLLLARALYHQPSILILDEATSHLDVATEQRIAAMLGDLKITRIFAAHRP
                     DTIAIADRVIHLARNGMLTEEHAQPKLGSAMGQYSQHARGELYARSQGD"
     gene            4267..4428
                     /locus_tag="VE783_03730"
     CDS             4267..4428
                     /locus_tag="VE783_03730"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52534.1"
                     /translation="MQDRKETRVLSRLGARELSAEEAQQVAGGLPVHTNVCTLDPNTG
                     SLDGDGCSR"
     gene            4468..4644
                     /locus_tag="VE783_03735"
     CDS             4468..4644
                     /locus_tag="VE783_03735"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52535.1"
                     /translation="MEKQKMNNDNRVPQRTNARELSQAEVDRITGGLRTLTICTIANV
                     IGAGGDEAPNPETC"
     gene            4727..4879
                     /locus_tag="VE783_03740"
     CDS             4727..4879
                     /locus_tag="VE783_03740"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52536.1"
                     /translation="MKNDKRVLSRQNARELSQEEVNSVSGGIRTLTVCTVPFAATTVD
                     GDPGEC"
     gene            4940..5092
                     /locus_tag="VE783_03745"
     CDS             4940..5092
                     /locus_tag="VE783_03745"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52537.1"
                     /translation="MKQEKRVLSRKNARELSPQEVSIITGGIRTATVCTIGATPKSLD
                     GDPGEC"
     gene            5160..6248
                     /locus_tag="VE783_03750"
     CDS             5160..6248
                     /locus_tag="VE783_03750"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52538.1"
                     /translation="MKIIVLAHPNDNHTAPLKWALEQAGYKVICWSGPGWQNNQQASI
                     YFDGRTRLRLGEHSVDEGDVVWIRRPQPPVSHPNTAEPDKKFAEGEYRWFNWSVLYLL
                     SELPVRCVNPYDASRHINNKSVQLLMAAASGMLVPQTLMSNEPAAVREYLRAPRQEAI
                     CKAFFPHIWQKSEGGMAVTETFKLKEEQLPEDDEVLTYAPAIYQDLVDKEFDVRMVLL
                     GETVYSYSVRTPKGALDWRQDAGQGQVKVKTIETPPDVEHAVLRFAKKAGISFGSLDF
                     AIDRQGRWWFLEINEEGQFLWLDEFNPEAHMQEKFLAFLTLPAGASRAEIEERQFQFP
                     SWPDYCAVIKEEGPVEEVNINVGFVSVE"
     gene            complement(6397..7332)
                     /locus_tag="VE783_03755"
     CDS             complement(6397..7332)
                     /locus_tag="VE783_03755"
                     /inference="COORDINATES: protein motif:HMM:NF019474.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HYX52539.1"
                     /translation="MSSANPFPDLVIPAPSLRGRILNRIVRTVVKQWPRQNPALVVRR
                     SRQFFGLAGRLTPLYSKNVTITPVSQPAGEWLTPVQTADSNRVILYLHGGGYISCSVR
                     SHRPITLPLARISSTRVFSLEYRLAPEHPFPAAVDDAAAGYRWLLQQGHSPEHIVFAG
                     DSAGGGLAIAAMLRLRTQSVPLPAAAVCFAPWVDLTGKCNYRNGQDCSMFRGDDIATF
                     AGLYLRDIAAEHCEASPVFGDLTGLPPLLIQASSAELLFDDALRLHERATAAGVRSRL
                     DVYPGLPHVWQMFIGLIPEAEMALRAAAEFVTKPV"
     gene            complement(7307..>8163)
                     /locus_tag="VE783_03760"
     CDS             complement(7307..>8163)
                     /locus_tag="VE783_03760"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52540.1"
                     /translation="PEVTYEEDKVAHVQTEFGFDVLEVAKQRYTSQAFHDFIGFQVAQ
                     PVLERAFVTTYGIELKDLLRNEDLAIGSYRHALSVWVPRLTKVALITKKKELEALPNF
                     NARKFRYVLRRAQYEKEWGKNYYRPNFFVKFLAVIVKILPKIGPLRALDIKPPTPKTE
                     QMYFASIDETLKVYRRELRLQGELHVPLEDDDLDTGRRTVPGEYKMADRAYSRLVGML
                     ADERFAQLTPELRDNVLNFYANLDQPYETKRHKDEWNTLLKNLEALRQQTTVARQKSP
                     DVISKPVP"
BASE COUNT         1739 a         2447 c         2254 g         1723 t
ORIGIN      
        1 gtcattgtaa gattagcagc agcttggact tagcgagcag gaaggctgat ggccggactc
       61 tccttggccg ccgaccggct caccaaaacc ggagcgggct tttcgctggc catggaaggc
      121 cgttcgctcg tggccgctga aatcggtcaa attgcgcctg agttgccggg ttaaggctgc
      181 ttacctaagc agctcagcat ctaattgctc cattgaggac gaaccatgct gtaccggaac
      241 ctgtgtttga ttgcttttat ccttacggct ctcgcggccc agtcacaaac cagctcgaat
      301 caaaccgctt caatggcgcc ctcctgcctg gctccgaatt gcgcggacgt caaccccagc
      361 aaagctccgg tcttccccac tcaccaggtc cagggtcaat gggtcaccga agatttcaag
      421 tccaccgatt cttcggtctc ctgctcagtc gtgaaatatg acaactcgca acccaaaccg
      481 attcttcatc tcctttgtcc tggcccccag gtgttcgcac cgctccgcgt ccatctgagc
      541 cttacgtgga agcagatcag tgatataccc gccaagctcc agcacatgct ggttcgcaca
      601 gacgctctgg tcaaattcaa atcaaaaaag ggtgagtcaa aagctgaact caccatgtct
      661 gacccgcaag ccggcggatc atccagggag tgggtcagtt tcaacagcat tgaggtaggc
      721 ctggttctcc cgaacgagaa atagctctcg cgaaaaaaag gccgggcgcc ccaagcccgg
      781 cccccccgcc aaacttgccg cgaggaaatc tcagatacga aaattcgcgc ccacttaccc
      841 ccgccgtgtt cgggatctca gccctgaaaa ttaaacggag acgggaaaag acgctgacgc
      901 cccggcatga atacgtgtgg ctcaaacgca gcactgaaga caacaaagtg aatggagatg
      961 gagctgcgct atctcatgag cccgcacggg tacccgcgcc ggtcaacgct tagctagcaa
     1021 agtagtggaa gagaactctg tgagatggcc ggtatgatcg gcgactcgat gtacccggca
     1081 aactgggatt gccagtggaa agccttcaat ggctccaatg ccgtgagggc tgcaatcgga
     1141 accggtagct ttaaagcagt atgcgtcggc acgctcttct gcgccggggc cacaaagtga
     1201 aaatcaaccg tcacaggcgg cgtggcagca tccccatccg cgtcaattga gaacgagaca
     1261 aggtttgccg ccgccacaat cgcgagcatc aggcaaatca aagttccgcg gatgagtttt
     1321 tgcaccacca tcccgcaaag aatagcaaca gagccttata tatgcaacgg ccagcccgga
     1381 gctggttgcg ggcctgctcc gaactgtccg gggttcattt tctaccaccg aaaaggctgt
     1441 tccttttcag cggcttacgc cattccaaag ctctcgagca aggccactct cctcagcggc
     1501 cagtttcaaa atggaactgg aacttgggat tttctaagct ccctttaatt tctccaccgc
     1561 acaaggctgt agtatgtcct cttccggccg aagactaagg accgcatgcc cccgcagaac
     1621 gcgaactcgc cgtcttccgc tccgctgcct cttttccgcc ccgagccaat cgccgctcgg
     1681 ttgcgcatgg aaggcgaggt tctgctggtt cgcccgtttt ccctttcgct gctcacagct
     1741 ctggcgcttg ccatcaccac tgctgccatt gcttgcctgc tgctcatccg cgtgccacac
     1801 gtgcagcgcg tgccggtaca ggttttcgcg gctcccgcca gcaatcacga tgtgaatctt
     1861 ttcctcccaa cggggatcac ccccggcgtg agtcagggtg atcgcatccc gctgagcttc
     1921 ggacaccggc actcggtggt ggccgtcgta gaatcttcca cttccgggaa caacagcctg
     1981 aaaattgtgg ccagcatacc ggagatcgat atcgaattac ccggctctgc ttccgccgaa
     2041 ataccggctg gcagccgttc gctgcttaac tggctccttc atcgggaggg cgaatgagcc
     2101 aatcgcagat gagaggcctg ctgcgcagcc tgctctccca ctccgtgctg cccatgattt
     2161 ttcagacgga ggccacagag tgcggactgg catgtttggc tatggttgcc aactatcacg
     2221 gcctgcaaat ggatctcgcc accctgcgcg agcgatgttc catctcttta cgaggctcga
     2281 ctctcggaca gctcatcaat tttgcttccc gcctggaatt ttccagccgg ccgctccgca
     2341 ttgaacttga agatttgccg tacctgcaaa caccctgcat tctgcactgg gacatgactc
     2401 actttgtggt gctcaagcgc gccacggaaa agcatatcgt catccatgat cccgcgcgtg
     2461 gaataagaaa actgagttac cacgaagcca gtgaccactt caccggcgtc gcactggaac
     2521 ttactcccac gccggcgttc gcgccgcgga aggaatcgca ccagctcagg ttgcgtgatc
     2581 ttgtcggccg gatcgtcggg ctacgcgggg ccatggttca ggtggctgct ctggccgtgg
     2641 cattggaact gtttgccatt gtcagcccgc tctttctcca gatcgccgtg gacaaggccg
     2701 cgagtgcgtc aagggccact ctgctcgcct cgctcggcct gggattcatg ttcctggtcg
     2761 tgctccagtc gtttctcgcg ggtctgcgta gctgggccac gctttatttc ggcaccgcca
     2821 tcaagctcca gtggtttgcc aatctttttt ctcacctcct gcgcctcccc gtttcgttct
     2881 ttgagcgccg ctatttcggc gatctgattt cccggtttga tggcgccgag gtgatccagc
     2941 gcacgctgac taacaacttc attgaagccc tgctcgacgg gaccgtctcg ttgtttgtag
     3001 tggtggtaat gttcctctac agtgcgcggc tcggagtgat cgtgattggc ggactggtca
     3061 tctatgccgc cgtgcgcgct ttctcctatc gtcccttgcg cgatcgcacg gaagagcaga
     3121 ttacccgggc tgcccgccag cagagccact ttcttgaaac gctgcgaggc attcgtacca
     3181 tcaaggtctt cggccgcgaa gatagccgca agagcaattg gatgaacctg ctggtggcca
     3241 acgtgaatgc ccaggtcgcc agtgaaaggc tctcgatatt cgtccggtcg gccaacctcc
     3301 tcatcttcgg actccagact gtggcggtcg tctgggctgg cgtggttctg gttcagcaga
     3361 acaggcttac tgtcggcatg ctgtttgcgt tcgtcgccta ctctgagcag ttcaagctgc
     3421 gcatgatcac tttagtagat cgcgcttttg aatttcgcat gctgtcgctt caggctgacc
     3481 gtctgtcaga cattgccttt gccaaaccgg aatctctggc cgaagcctcc gaacccgtcg
     3541 cccccttttc agcgggcatt gaggtgcgct cgctttcctt ccgctattcg gaaagcgatc
     3601 cctggctgct gcgtgagatt gggcttcaga ttcgccccgg cgaatgtgtc gccctcacgg
     3661 gcccttctgg cgccggcaaa tccaccttgc tcaagcttat ggccggtctg ctggttcccg
     3721 aacagggcga cgtaatcatc gctggccatt ccgtctgcac gtcccgcgca gccgtaagcg
     3781 cgaaggtcgg atttgtgttg caggatgatt cccttttcgc cggaactgta gcttccaaca
     3841 tcgcgttctc ttcagacgta ccggagctcg accgtgtcag ggaatgtgcg cgcctcgcct
     3901 gcctggaaga agacatcgcc aatttgccca tgggatatga aaccctgatc ggcgaaatgg
     3961 gcagcgcact ttccggagga cagcagcagc gcctgctgct ggcgcgcgct ctgtatcacc
     4021 agccctctat tctcatcctg gacgaggcca ccagccatct tgatgtcgcc accgagcagc
     4081 gtatcgccgc tatgctcgga gatttgaaga tcacacgtat ctttgccgcg cacaggccgg
     4141 acacaatcgc cattgctgat cgcgtcattc acctggcgcg taatggcatg ctgaccgaag
     4201 agcatgcgca gccaaagctt ggctccgcaa tgggccaata ttcccaacat gcacgaggag
     4261 aactttatgc aagatcgcaa ggagactagg gtcctgagtc gtctgggagc acgtgaacta
     4321 agcgcggaag aggcgcagca ggtggccggg ggactcccgg ttcataccaa cgtgtgcacg
     4381 ctcgatccaa acaccggctc gctcgacgga gacggctgca gccgctagtc atatgagtcg
     4441 caggcagccg cctgcggatt gctgaccatg gagaaacaga aaatgaacaa cgacaatcga
     4501 gtcccacagc gcactaatgc gcgcgaactt tcacaggcgg aagtggaccg tattaccggc
     4561 gggctccgca cgcttaccat ctgcaccatc gccaacgtga tcggtgccgg tggcgatgaa
     4621 gcgcccaacc cggaaacctg ttgactttcg ccgtgatcgc taattgagcc gcggcaacaa
     4681 agttggggca gcacgtccgc tccacaccac gaaaaggaga aaaaggatga agaatgacaa
     4741 gcgagtactg agccgtcaaa atgctcgcga actgagccag gaagaagtga acagcgtcag
     4801 tggtggcatc cgcaccctga ccgtgtgcac cgtcccattc gcagccacca cagtggatgg
     4861 tgatccgggc gagtgctagt tgccctcttt ggggtggcgc aagccgcccc atcttctgac
     4921 agcttgaaag gagcaaacaa tgaagcagga aaaaagagta ttgagcagga aaaatgcccg
     4981 tgagctgagc ccgcaggagg taagcatcat taccggcggc atccgtacgg ccacggtttg
     5041 cacaattgga gccacgccaa aatcacttga tggtgatccc ggcgagtgct gatcatcctt
     5101 aaaaggggcg tttcctcagg gaaccgcccc gttgttgcag gttaattccg gaggctctca
     5161 tgaaaatcat cgttctcgcc catcctaatg acaatcacac cgcgccttta aagtgggcac
     5221 tggaacaggc tggctataaa gtcatctgct ggagcgggcc gggatggcaa aacaaccagc
     5281 aggcctccat ctattttgac ggacgcacgc gcctgcgact gggagagcac tctgttgacg
     5341 aaggtgatgt agtgtggatt cgccgcccgc agccgccggt ttctcatccc aataccgccg
     5401 agcctgacaa gaagttcgcg gaaggcgaat accgctggtt caactggtca gtgctctacc
     5461 tgctgagcga actgccggtg cgctgcgtca atccttacga cgcctcacgc cacatcaata
     5521 acaagtccgt gcagcttctc atggccgcag ccagcggcat gctggtgccg cagacgctca
     5581 tgtccaatga gcctgcagcc gtgcgtgagt atttgcgcgc tccgcgccag gaggcaatct
     5641 gcaaggcctt cttcccccac atctggcaga agagcgaagg cgggatggcg gtgaccgaaa
     5701 cgttcaagct caaagaagag cagttgccgg aagatgacga ggtcctcacc tacgcgccgg
     5761 ctatctacca ggacctggtg gataaagaat ttgacgttcg tatggtgctg ctgggcgaaa
     5821 ccgtctattc atactccgtc cgcactccca agggcgccct cgattggcgg caggatgccg
     5881 gacagggaca ggtcaaggta aaaacgatcg agactccacc cgatgttgag cacgcagtgc
     5941 tccgcttcgc taagaaagcc ggaatttcct tcgggtcact cgactttgcc atcgaccggc
     6001 agggccgctg gtggttcctg gaaatcaacg aagaaggcca gttcctctgg ctcgacgagt
     6061 tcaaccccga ggcgcacatg caggagaaat tcctcgcctt tctcacgctg cccgccggcg
     6121 cttcacgagc ggagattgaa gaacgccagt tccaattccc ttcctggccc gattactgcg
     6181 cggtgatcaa ggaagaaggg cccgtagaag aagtaaacat caacgtggga tttgtgtcag
     6241 tggagtaacg gcgcagctgc gaagcagcgg ccatatctcc ggaatcccat gaatggaaac
     6301 agaaccgggc atcgggcaca actgacgtgg tgcttacgag acacgcatca gtgttcgtca
     6361 gtggctaaat tcttctgtat tcgcgttaat tcgcggctat acaggttttg tcacaaattc
     6421 cgctgccgcc cgcagcgcca tctccgcttc agggatcagc ccaatgaaca tctgccacac
     6481 gtgcggcagt cccggataga catccagccg gctacggaca cccgctgccg tcgcgcgctc
     6541 atgcaaacgc aacgcgtcat cgaacagcag ctcagcgctg ctcgcctgaa tgagcagcgg
     6601 aggcaatccc gtgagatcgc cgaacaccgg tgaggcctcg caatgctccg cagcaatgtc
     6661 ccttaggtac aaaccggcaa acgtggcgat gtcgtcaccg cgaaacatgg agcagtcctg
     6721 cccgttgcga tagttgcatt ttcccgtaag gtctacccat ggggcaaagc aaaccgcagc
     6781 cgcaggcagc ggcacagatt gagtgcgtaa acgcagcata gcggcaatgg ccaggccgcc
     6841 gccggcggag tcgccggcaa aaacgatgtg ttccggtgaa tggccctgct gcaatagcca
     6901 gcgatagccc gcagcggcat cgtccaccgc cgctgggaac ggatgctcgg gcgccaggcg
     6961 atactccagc gagaacacgc gtgtgctgga gatgcgtgcc agcggtagcg tgataggccg
     7021 atgcgagcgg accgagcagc tgatgtatcc gccaccgtgc aggtaaagga tcacccgatt
     7081 cgagtcggca gtctgaaccg gcgttagcca ttcgccagcc ggctggctca ctggtgtgat
     7141 ggtgacgttt ttcgaatata gcggggtcag ccttccagcc agcccaaaga actgccgcga
     7201 gcgccgcacc accagcgcag ggttctgccg gggccattgc ttcactacgg ttcgaacaat
     7261 acggttcagg atccgtccgc gcagggaagg cgccgggatt acaagatcag ggaacgggtt
     7321 tgctgatgac atcaggtgat ttttgccggg caacggtggt ctgctgccgc agcgcctcaa
     7381 ggttcttcaa tagagtattc cattcgtcct tgtggcgctt ggtctcatag ggctggtcca
     7441 ggttagcgta gaaattcagc acgttgtcac gaagctcagg cgtcagctgc gcaaatcttt
     7501 catccgccag catgcccacc agacgtgaat aggcgcggtc cgccattttg tactcgcccg
     7561 ggaccgtccg gcgccccgta tctaaatcat catcttccag cggaacatgt aattctccct
     7621 gaaggcgcag ctcacgccgg taaactttga gcgtttcatc aatgctggcg aaatacatct
     7681 gttcggtctt gggcgtgggc ggtttaatgt ccagggcccg caacggcccg atcttgggaa
     7741 gaatctttac gatgacggcg aggaatttaa cgaagaagtt cggccggtag taattctttc
     7801 cccactcctt ctcgtattgt gcccgtctca ggacgtaccg gaatttgcgt gcattgaaat
     7861 ttggcagggc ttccagctct ttcttcttgg tgatcagcgc aactttcgtc agccgtggca
     7921 cccatacgct aagagcgtgg cggtagctgc cgatcgccag gtcttcattt cgcagcaaat
     7981 ccttcaattc aatcccgtaa gttgtaacaa atgctcgttc aagcacaggc tgcgcaacct
     8041 ggaaaccgat aaagtcatgg aacgcctgcg aggtgtagcg ctgtttcgca acttccagca
     8101 cgtcaaaccc gaactccgtt tgcacatgcg cgaccttatc ttcctcgtat gtgacctcgg
     8161 ggc
//
LOCUS       DASQYP010000117         7483 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_303048, whole genome shotgun sequence.
ACCESSION   DASQYP010000117 DASQYP010000000
VERSION     DASQYP010000117.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 7483)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7483)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7483
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_303048"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..285
                     /locus_tag="VE783_03765"
     CDS             <1..285
                     /locus_tag="VE783_03765"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52541.1"
                     /translation="PSIFGNPPQTFSGTTGSIIGTSAAELDDSISGPNLASNPNPVPT
                     CSGGGPLIININQEWRIGSDVSGSGRRVAQDNFERFLDHAAHNPINTPFP"
     gene            292..1305
                     /locus_tag="VE783_03770"
     CDS             292..1305
                     /locus_tag="VE783_03770"
                     /inference="COORDINATES: protein motif:HMM:NF025030.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HEAT repeat domain-containing protein"
                     /protein_id="HYX52542.1"
                     /translation="MAKKTAFFISVLILVLFASSAFAIPVPVFDLSELATSSDLIIAA
                     SIEDVQETGRTVMNLRGMDLEAQILMSHLNVDRVLKGSTSKNLISVRFVLPIREYIGY
                     RSLDRGSYRLVFLRKSRDAEEYEFTSPYYPSLPAARGPVKAQEKLIDTLVGELANVVR
                     SPESDWNSRRVAMFALRGVSSERATEALREALASTDSRINIFAAGLLLLRNDISGLAV
                     AEVTLSARNQHQIRDDDRNNLLAGITYGIHDQRALNVLKHLLQAPDPDVRSAAASGLG
                     NTGASDARELLIESLHDPNTSVRYASATALANLTGAGEWRPANLEEFAKDEPRYLAHW
                     TNR"
     gene            complement(1354..2022)
                     /locus_tag="VE783_03775"
     CDS             complement(1354..2022)
                     /locus_tag="VE783_03775"
                     /inference="COORDINATES: protein motif:HMM:NF020893.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VTT domain-containing protein"
                     /protein_id="HYX52543.1"
                     /translation="MSARQKLFLKFTAWIAFLKTLGGWGVLVLAAVDSIAIPIPLDAL
                     VASYVYATPRHAWIFCIAGAAGSALGSLVPYALGRAGGELFLLKRISEDRLQRIRDRF
                     EKQEFLALAIPAMMPPPTPFKLLVFSAGVFEMRVINFLLAIFVGRVARFAILSILTMK
                     FGPQVVSQVRGVFTHHPVIGILGLIVLAALVYVVVRAIKAPAKEIAEALEEGEQQKSS
                     RKQN"
     gene            2216..2464
                     /gene="acpP"
                     /locus_tag="VE783_03780"
     CDS             2216..2464
                     /gene="acpP"
                     /locus_tag="VE783_03780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019948606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl carrier protein"
                     /protein_id="HYX52544.1"
                     /translation="MASLEERVTQIIVDQLGVEPSEVTSTASFVDDLGADSLDRVELI
                     MAFEEQFSLEIPDEDAEKIVTVQDAFDYIQKNSKSVKQ"
     gene            2516..2761
                     /gene="acpP"
                     /locus_tag="VE783_03785"
     CDS             2516..2761
                     /gene="acpP"
                     /locus_tag="VE783_03785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019948606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl carrier protein"
                     /protein_id="HYX52545.1"
                     /translation="MAAVEDKVKQIIVEQLGVDEGEVTPNASFVDDLGADSLDTVELV
                     MAFEEAFDIEIPDEDAEKIRTVKDAVDYIDKHAKGGK"
     gene            2762..4000
                     /gene="fabF"
                     /locus_tag="VE783_03790"
     CDS             2762..4000
                     /gene="fabF"
                     /locus_tag="VE783_03790"
                     /EC_number="2.3.1.179"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007403258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004315 - 3-oxoacyl-[acyl-carrier-protein]
                     synthase activity [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase II"
                     /protein_id="HYX52546.1"
                     /translation="MARRVVVTGLGLICGLGNTSPEVWSNIVAGKSGVARITQFDATA
                     FACQIAAEVKNFDPLNFIEKKEVKKMGRFIHFALAASDEAMKMSGLQVTPENATRVGV
                     HIGSGVGGFDIIEREHAALLSGGPRKISPFFIPAAIVNLAAGHVSIRYGAKGPNEATA
                     TACTTSAHAIGDAYKIIQRCDADVMIAGGSEAAITPMGVGGFAAMRALSTRNDEPEKA
                     SRPWDSGRDGFVIGEGAGIVILEELEHARKRGAPIFAEIIGYGMSADAYHITQPAEGG
                     EGGYRVMTNAMNDAKIQPNDVDYVNAHGTSTPIGDVLETKAIKRAFGDHPKLAVSSTK
                     SMTGHLLGGAGGLEAGITILALKDQVLPPTINLENADAECDLDYVPNQSRKAPLNIAL
                     SNSFGFGGTNGSLIFRRWTE"
     gene            4235..4954
                     /locus_tag="VE783_03795"
     CDS             4235..4954
                     /locus_tag="VE783_03795"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013700.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M23 family metallopeptidase"
                     /protein_id="HYX52547.1"
                     /translation="MQASWLEHQVSFRRADACACWYAIAGIGLDVKPGVYTLKLEGNT
                     GAGEKLDFSRTLQIGAAKYPTTTITVAPQFVEPPKEVLARIEEEQAFKKAVFAKTEPA
                     AEWNGGFDPPTDTTTSGGFGSSRLYNGHKQSQHTGLDFHAAVGTPVHATNSGKVIVAR
                     PLYYEGNCVMIDHGQGLISIYMHLSEFKVKEGDEVKKGQLIALSGGTGRSTGPHLHFA
                     VRWQGLYLNPATLLALKPPSR"
     gene            complement(5014..6123)
                     /locus_tag="VE783_03800"
     CDS             complement(5014..6123)
                     /locus_tag="VE783_03800"
                     /inference="COORDINATES: protein motif:HMM:NF024578.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PDZ domain-containing protein"
                     /protein_id="HYX52548.1"
                     /translation="MIRTIASALLLAGLSMPVSHAGAAQPEPAPKAKQFVYATPGVAG
                     RSYLGVDIKDVTSDRLSALKLKEEKGVEITMVDADAPAGKAGLKTGDVILQFNGAAVE
                     SEEQLRRLIRETPPGRTVILGISRDGNPMNVSVQLADHAKLMRGVLVPPPPSLPELPD
                     FNRMDIPGNVIVLRNTTAMLGVQTENLTRQLGDFFGVKNGEGVLIRSVDKNSPAEKAG
                     LKAGDVIVKVGDERLNDRADLSRTLRNYRQGGKVNLGVIRDKREQNVTVEVPERKGRD
                     SSQNVEGEEIWSLMDNMDDFAPEIESAELMAQNANDLALLQVQPQVERALKIYDNNMK
                     QYEKNWKNYQKGFEHMGDQLKDLQKVFQFELHDMI"
     gene            complement(6162..7292)
                     /locus_tag="VE783_03805"
     CDS             complement(6162..7292)
                     /locus_tag="VE783_03805"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52549.1"
                     /translation="MKTQLQITALALATWLAAGAALAQTGNARVYQQGSDWVQEVTGT
                     LPAAKLVKVTSSAGSIKVVGGPKSGITYTVREHFRAVTKEAALRELSHMQFRTSTSGE
                     TVALMAICEGDGRGHIDFEIQVPARTSALKLETQGGAVTAMNIAGKVEATTGGGDIHL
                     DQVGGPITVASAGGQIDIGKVGGDAALSTGGGNIRVVEAAGHLVASSGGGNLNIGSAR
                     LMTLETGAGSIKVDKCQGQLKAQTGGGTIDLSEIGGAAMIESAGGGIKIGTVRGGLRA
                     ETASGPIYATLARGASFTDSRIETAMGDIIVYVPEGLGVTVKAMVETARGRGITTEFP
                     ELKVSQSGGMGPREAWAEGSINGGGPVLHVHTATGNIDFKRK"
BASE COUNT         1564 a         2219 c         2130 g         1570 t
ORIGIN      
        1 ccttcaatct ttggcaatcc acctcaaacg ttcagtggaa cgaccggctc catcattggt
       61 accagcgctg cggagctcga cgactcgatc agcggcccca atttggcatc aaatccaaat
      121 cccgtgccca cctgcagtgg cggcggacca ttaattatca atatcaacca agaatggcgt
      181 atcggtagcg acgtttcggg atcgggaagg agagtcgctc aagacaattt cgagcgcttc
      241 ctggatcatg ccgcccacaa cccgattaac acaccgtttc cgtgagaaac tatggcgaaa
      301 aagacagctt ttttcatttc ggttctgata ttggtgctgt ttgccagttc agcatttgca
      361 attccggttc cggtatttga tttatctgaa ctggcgacct catcggatct gatcattgca
      421 gcttcgatcg aagacgttca ggaaacggga cgcacggtca tgaacctgcg cggaatggac
      481 ctggaagcac aaatcctgat gagccacttg aacgtggatc gagttctaaa agggagcacc
      541 tcgaaaaacc taattagtgt cagatttgtg ctgccgatca gagaatacat aggctatcgc
      601 agcctggatc ggggttcata tcgtcttgtc tttctgcgca agtcccggga cgcagaggaa
      661 tacgagttca cctcgcctta ttatccaagt ttaccggcgg cccgggggcc cgtgaaggcg
      721 caagagaagt tgatcgacac cctcgtcggc gaactggcga atgtagttcg ttcacctgaa
      781 tccgattgga attcacgccg tgtcgctatg tttgctttgc gaggtgtttc gtccgaacgc
      841 gcaactgagg ctttgcgcga agcgctggcc agcactgatt cgcgcatcaa catctttgct
      901 gccggccttt tactgctgag aaacgatatt tctggactgg cggttgcgga ggtgaccttg
      961 tctgcccgga atcagcacca gattcgggat gacgaccgta acaatctcct ggccggtatt
     1021 acctacggca tacacgatca gcgggccctc aacgtgctca agcatctgtt gcaggctccg
     1081 gatccagacg tgcggtccgc cgctgcctca gggctgggca atacaggagc gtcggatgcg
     1141 agagaactgc tgatcgagtc gttgcatgat cctaatactt cagtgaggta cgcgagcgca
     1201 actgcactgg cgaatctgac gggagcaggc gaatggcgac ccgcaaatct tgaggagttc
     1261 gcaaaggatg agcctcggta cctcgcccac tggacaaatc gttgaagagt agcctgttca
     1321 tgccaaagag tgggtactcg tggcagaaca gtctcaattc tgcttcctac tgctcttctg
     1381 ctgctcgcct tcctccagcg cctccgcaat ctctttggcg ggggccttga tcgcccgcac
     1441 cactacatac accagcgcag cgagaacaat cagccccaga atcccaatca cgggatgatg
     1501 cgtgaagacg ccacgcacct gtgagaccac ttgcggtccg aacttcatgg tcaggatgct
     1561 caggatggca aagcgcgcca cgcggccgac gaaaattgcc agcaaaaaat taatcactcg
     1621 catttcaaac acgccggccg agaagaccag cagtttgaaa ggcgtgggcg gcggcatcat
     1681 ggcagggatg gcaagggcca gaaattcctg cttctcaaag cgatcgcgga tgcgttgcag
     1741 ccggtcttcg ctgatgcgct taagcaggaa cagctcacca ccggcgcggc ccagggcgta
     1801 gggaaccagc gatccgaggg ccgacccagc agctccggca atacagaaga tccacgcatg
     1861 gcgcggagtg gcatagacat agcttgcgac gagcgcgtcc agaggaatgg gaatggcgat
     1921 gctgtccacg gcggccagca ccagcacgcc ccatccgcca agggtcttga ggaaggcgat
     1981 ccaggcggtg aatttgagaa agagtttctg acgggcagac aagcgacaat tttaacgtaa
     2041 cctcgattcg cgcgacccga ggcaaacatt tagaatctga agatggcggt gacgggactg
     2101 cggcgtttgg gagcagcggc gcgctgaact gcggttcagg caaagcggcg caagtgccct
     2161 ttacacaaca ttttcccagc aattacacta ggcggtttgc tacccaggag ccggaatggc
     2221 ctcgttagag gaacgggtca cccagatcat tgttgaccag cttggcgtgg agccttcaga
     2281 ggttacgtcc actgcttcgt ttgtcgacga tctgggagct gattcgctcg accgtgtgga
     2341 actgatcatg gcctttgagg agcagttcag cctggagatt ccggacgaag acgcggaaaa
     2401 gatcgtcacc gtccaggacg cattcgatta catacagaag aattccaagt cagtaaagca
     2461 gtgaaccggc ccccgggcgg aaatcttgag cgcaataaga aggagacaag gttctatggc
     2521 agcagtggaa gacaaggtaa aacagatcat tgttgaacaa ctcggagtgg acgaaggcga
     2581 agtgacgccc aatgcctcct ttgtggacga tctcggcgca gactcgctcg atacggtcga
     2641 gctggtcatg gcgttcgaag aggcgttcga catcgagatt ccggacgagg acgcggagaa
     2701 gatccgcacc gttaaagacg cggttgacta cattgataag cacgcgaaag gcgggaagtg
     2761 attggcaaga agagtcgtgg ttacaggcct gggcctgatc tgcggcctgg gcaataccag
     2821 cccggaagtc tggagcaaca ttgttgccgg caagagcggt gtagcaagaa tcacccagtt
     2881 tgacgcgacc gctttcgcct gccagattgc ggcggaagta aagaactttg atcccctgaa
     2941 cttcattgag aagaaagaag tgaagaagat ggggcgcttc atccattttg cgcttgctgc
     3001 ctccgatgaa gcgatgaaaa tgtccggcct gcaggtcacg cctgaaaacg ccacccgggt
     3061 gggcgttcac attggttcag gcgtaggcgg attcgacatc attgagcgcg agcacgccgc
     3121 tctgctgtcc ggcgggccgc gcaagatttc tcctttcttt attcctgctg caatcgtgaa
     3181 ccttgccgcc ggccatgtga gtatccgcta cggcgccaag ggaccgaatg aagccaccgc
     3241 caccgcgtgc accaccagcg cgcacgccat tggcgatgcc tacaagatca tccagcgatg
     3301 cgatgccgat gtgatgattg ccggcggttc tgaagcggca atcactccca tgggcgtggg
     3361 cggcttcgct gccatgcggg cactttcgac gcgcaatgac gagccggaga aagccagccg
     3421 tccatgggac tcaggccgtg acggtttcgt gattggcgaa ggagcgggca tcgtgatcct
     3481 ggaagagctg gagcatgccc gcaagcgcgg cgctcccatc ttcgctgaga tcattggcta
     3541 cggaatgagt gctgacgcct atcacatcac gcagccggct gagggaggcg agggcggcta
     3601 tcgcgtgatg accaatgcga tgaatgacgc gaagatccag ccgaatgacg tggattacgt
     3661 gaacgctcac ggtacttcaa ccccgattgg cgacgtgctg gagaccaaag cgatcaagcg
     3721 cgcatttggc gatcacccga aactggcggt gagttccacc aaatcaatga ctggccacct
     3781 gctgggcggc gccggtggat tggaagcagg cataacaatc cttgcgctca aagaccaggt
     3841 tctcccccca actatcaacc tggagaacgc tgatgcggaa tgcgatctgg actacgttcc
     3901 caaccagtcc cgcaaagcgc cgctgaacat cgcactttcc aactccttcg gcttcggcgg
     3961 caccaatgga tcgctgatct tccgccgttg gacggaataa ccgggacatc tgttgttcac
     4021 acccatgctg actgcgccat ctcgccaaaa gccgaggtgg catttgttcc tggcgccgtc
     4081 aatagtttgc gttgcgctcg tgctggccgg ctcttccgtt ctctccgcgc aatcttcgtc
     4141 gccagccgca tggcaggtgc aggcacagcc tttgaggctg gtcaacgggg ctccggtact
     4201 ttttcgtgta aaggcgccga gggacatcgt atcgatgcag gcaagctggc tggagcacca
     4261 ggtttcgttt cgtcgcgcgg atgcatgtgc gtgctggtat gcgattgccg gcattggtct
     4321 ggacgtaaag ccgggcgtct atacactcaa gcttgagggg aacaccgggg ctggcgagaa
     4381 gctggacttc agccggacgc tgcagatcgg cgcggcgaag tatcccacca ccaccatcac
     4441 tgtcgcgccg caatttgtgg agccacctaa agaagtgctg gcgcgcattg aggaagagca
     4501 ggccttcaaa aaggctgtgt tcgccaaaac ggagccggcc gcggaatgga acggcggctt
     4561 tgatccgccg actgacacca ccacatcagg cggcttcgga tcatccaggc tgtataacgg
     4621 acacaagcag agccagcaca ccgggttgga tttccatgcc gcagttggaa cacccgtgca
     4681 cgcaaccaac agcggcaagg tgattgtggc gcggccgctt tactatgagg gcaattgcgt
     4741 gatgatcgac catggacagg gactgatctc catctacatg catctttccg agttcaaggt
     4801 gaaggaaggt gatgaggtga agaaaggcca gctgattgcg ctgagcggcg gtaccggacg
     4861 ctcgacgggg ccacatctgc actttgcggt acgctggcag ggcctttatc tgaatcccgc
     4921 gacgttgctc gcgctgaaac cgccaagccg ctaaacgtgc gaacataaaa agagcgtggc
     4981 cggagccacg ctcgccggga ggcatgacga aagtcagatc atgtcgtgca gctcgaactg
     5041 aaataccttc tgcaagtctt tgagctggtc gcccatgtgt tcgaagccct tctggtaatt
     5101 cttccagttc ttttcatact gcttcatgtt gttgtcatag atcttcaggg cgcgctccac
     5161 ttgcggctgc acttgcagca gcgccaggtc attcgcgttc tgggccatca gctcggcaga
     5221 ttcaatttcg ggggcgaaat catccatgtt gtccatcaga gaccagattt cttctccctc
     5281 gacgttctgt gatgagtcgc ggcccttgcg ctccggcact tccaccgtca cgttctgctc
     5341 acgcttatcg cgaatcacgc ccaggttcac cttcccgccc tggcgataat tccgcagagt
     5401 ccttgagaga tcggcacggt cattcagccg ctcgtcgcca actttcacga tcacgtcacc
     5461 ggccttgagt ccggcttttt cggcggggct gtttttatcg acagagcgta tcagcacgcc
     5521 ctcgccgttt ttgacgccga agaaatcacc gagctgcctg gtaagatttt ccgtctgcac
     5581 acccagcatg gccgtggtgt tgcggagcac aatcacgttg ccggggatgt ccatacggtt
     5641 gaagtccggc aattcaggga gagatggcgg aggaggcacc aaaacacccc gcatgagctt
     5701 ggcgtgatcg gcgagctgca cggagacgtt catggggttg ccgtcgcggc tgatgcccag
     5761 gatcacggtg cgtcccggag gcgtttcgcg tatcaggcgg cgcaactgct cttcactctc
     5821 aacagcggcc ccgttgaact gcagtatcac atcgccggtt ttcaaaccgg ccttgccggc
     5881 gggcgcatca gcatccacca tcgtgatctc cacacctttt tcttctttca gcttcagcgc
     5941 ggaaagccgg tcgctggtca cgtcttttat gtcaacccca agatacgaac gtcccgccac
     6001 gcccggcgtg gcgtaaacaa attgtttcgc cttgggtgca ggctcaggct gcgcggcgcc
     6061 tgcgtggctc accggcatgc tcagccctgc caggagcagc gcgcttgcaa ttgtgcgaat
     6121 catggccaga tctcctccgt cagagattct tctttctctc tctacttccg cttgaaatcg
     6181 atattcccgg tcgcggtgtg cacatgcagc accggaccac cgccattaat tgaaccctcg
     6241 gcccaggctt cgcgcggccc cataccgccc gactgcgaca ccttcagctc cgggaactcc
     6301 gtggtgatgc ctcggcctct tgccgtctcg accatggcct tcaccgttac gcccagccct
     6361 tccgggacgt acacaataat gtctcccatg gcggtctcaa tgcgcgaatc ggtaaagctc
     6421 gcgccgcgcg ccagggttgc gtagatcggc ccgctcgccg tttcagcgcg caggccaccg
     6481 cggacagtcc caatcttgat gccgccgccg gcgctttcaa tcattgcggc gccgcctatc
     6541 tcgctcaggt caatcgtgcc gccgccggtc tgcgctttga gctgcccctg acacttgtct
     6601 actttgatcg accccgcgcc cgtttccagc gtcatcagcc gcgccgagcc gatattcaaa
     6661 ttcccgccgc cggagctcgc caccagatgt cccgcggcct cgaccacgcg aatatttccg
     6721 ccgccggtag aaagcgccgc atcgccaccg acttttccga tatcaatctg ccctccggca
     6781 ctcgccaccg tgatcggccc gccgacctgg tccaggtgaa tgtcaccgcc gcccgtagtg
     6841 gcttcaacct tccccgcgat gttcatcgcc gtcaccgctc cgccctgggt ttcgagcttt
     6901 agagcggaag tgcgcgccgg cacctggatc tcgaaatcaa tatggccccg gccgtcgcct
     6961 tcacaaattg ccatcagggc caccgtttcg ccagaggtgc tggtcctgaa ttgcatgtgg
     7021 ctgagttcgc gcaaagcggc ttctttcgtc accgcgcgaa agtgttcgcg tacggtgtat
     7081 gtgatcccgc tcttcgggcc gcccaccacc ttgattgacc ccgccgatga cgtgaccttc
     7141 accagcttcg ccgctggcag cgtgcccgta acctcctgca cccagtcgct gccctgctgg
     7201 tatacccggg cgtttcctgt ttgcgccaac gctgcgcctg cagccagcca tgtggccagc
     7261 gccagcgccg tgatctgtag ttgcgtcttc attcctctgt tcagttccgc ccgttaatca
     7321 agatgtgggg tcgcgctcaa ataccgtttg ctctggctcc ggatatacgg attcgcatcg
     7381 ctcgtcgcca gcacctgcag cgcctcgcgc acgctggtat cggccttcac cggatcgagc
     7441 agtccaatcg cttctgagcg tacgccggcg ttgctgtcat gga
//
LOCUS       DASQYP010000118         5371 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_303141, whole genome shotgun sequence.
ACCESSION   DASQYP010000118 DASQYP010000000
VERSION     DASQYP010000118.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 5371)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5371)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5371
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_303141"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1381
                     /gene="mutS"
                     /locus_tag="VE783_03810"
     CDS             <1..1381
                     /gene="mutS"
                     /locus_tag="VE783_03810"
                     /inference="COORDINATES: protein motif:HMM:NF003810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0030983 - mismatched DNA binding [Evidence
                     IEA];
                     GO_process: GO:0006298 - mismatch repair [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="DNA mismatch repair protein MutS"
                     /protein_id="HYX52550.1"
                     /translation="PAVDAELDELRNLSRNSKQYIAQIEERERKRTGIGSLKVKFNSV
                     FGYYIEISKANLHHAPTDYERKQTLVNAERFTTPELKEYEAKVLDAQEKIVEIERRLF
                     AELRSAIAAEARRIRQTSLALAEVDVLAALAFIAQNRGYCRPAFITQTARDSQAAEDH
                     FAPDAFSCEGGGELEIIEGRHPVLEQSDLTGSNDRFVPNDLFLNSGSHSILLITGPNM
                     GGKSTYLRQTALIVLMAQMGGFVPARSARLPVIDRIFTRIGASDNLARGRSTFMVEMT
                     ETAAILNTATPRSLILLDEIGRGTATYDGLAIAWAVIEYIHSSSRAKTLFATHYHELT
                     ELDRLEGVKNFHVSVKENAGGIVFLRKVEPGAADRSYGIEVAKLAGLPPEVIGRAREV
                     LHEHENAEHEATEHLSPGAREPEPQMQLTMFTPLSQKIVDRLREADVNRLTPLDALNL
                     LSELKKQLG"
     gene            complement(1777..2070)
                     /locus_tag="VE783_03815"
     CDS             complement(1777..2070)
                     /locus_tag="VE783_03815"
                     /inference="COORDINATES: protein motif:HMM:NF016139.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF417 family protein"
                     /protein_id="HYX52551.1"
                     /translation="MDASNVSTIIDVIDIATAVLIALRPFSPRDSLAGSIGAIVTFLL
                     TNSFLLSTPGTIDHSHVIPFLAGPGGFIIKDLPMLGCALWIAGEALTGTGLAE"
     gene            2448..3545
                     /gene="nagZ"
                     /locus_tag="VE783_03820"
     CDS             2448..3545
                     /gene="nagZ"
                     /locus_tag="VE783_03820"
                     /EC_number="3.2.1.52"
                     /inference="COORDINATES: protein motif:HMM:NF013126.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="beta-N-acetylhexosaminidase"
                     /protein_id="HYX52552.1"
                     /translation="MRKKNTQDLRRQVGQLLIMGYDGLEIDGKLRTTLSTLQPGGVIL
                     FARNIETPQQTWNLLRDSQATTPVPMFLCVDLEGGTVDRLKKVIAPAPAVEDVFRTGD
                     RKLWRMHGNILGLEARALGFNTDFTPVFDLGLPASRSVLTSRTASANSKDVIAYAREC
                     LKGLKAAKVLGCGKHFPGLGEANLDTHHELPSIKKPWKKLWAEDLLPYRELKNQIPFV
                     MVAHASYPDVTKDKLPASLSRKWMQEVLRKKIGFRNLIISDDLEMGGVLSTGPIEEVA
                     VETLRAGADMYLVCHNQELVWRGYEAVLREAEKDRRFAAYVEQAAKRVLALKRRSGEL
                     RGFAREPKARVVANLKKLVENFSKVVAEHSA"
     gene            3542..4684
                     /locus_tag="VE783_03825"
     CDS             3542..4684
                     /locus_tag="VE783_03825"
                     /EC_number="2.7.1.170"
                     /inference="COORDINATES: protein motif:HMM:NF015647.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anhydro-N-acetylmuramic acid kinase"
                     /protein_id="HYX52553.1"
                     /translation="MIVAGVMSGTSADGIDVALVEIAGDDQLRVRLLAHHHFPYPSRV
                     RQAVLAAMNAMRASVADLSRLNFVLGELYADAVSKAVQRSGMARLELVGCHGQTIYHQ
                     GETASYLGRKVACTWQTGEGSVIALRLGVPVVSDFRPADMAAGGKGAPLVPFLDHALF
                     RDASAGRIVQNIGGIANLSVISANARAEDVIAFDTGPGNMVIDQLMQKLFGKNYDGNG
                     AMAAHGEVLEPVLREFLRRPFFRKSPPKTAGREEFGREFAQEFLRKCGRADKADVIAT
                     ATALTARSISDAIRCFALPRGDFRDYIVSGGGTQNSTLMKMLRESLRPLGLAVRTTDD
                     LGIASQAKEAVAFAVLAYQTWLRRPGNVPSATGAKRAVVLGKISHV"
     gene            4824..>5371
                     /locus_tag="VE783_03830"
     CDS             4824..>5371
                     /locus_tag="VE783_03830"
                     /inference="COORDINATES: protein motif:HMM:NF012706.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HYX52554.1"
                     /translation="MIIESSPLNLDPRVGTDAQSERIAGLIFDSLVRKDDHFKLQPWL
                     AEKWEISDPQTYIFHLRKNVRFHDGRPLTARDVKWTLDSYSNGTLVSPRVATYRHVKS
                     VEAPDDSTVIIRLTEPDATLLWNLSDGAFGVVPHGSGKELSKNPVGSGPFKFVLNEPD
                     SQVLLNRNDQYWNTPPKVEHVR"
BASE COUNT         1152 a         1440 c         1715 g         1064 t
ORIGIN      
        1 gcccgctgtg gatgccgagc tggacgagct gcgcaacctg agccgcaaca gcaagcagta
       61 catcgcgcag attgaagagc gcgagcgcaa gcgcaccggc atcggatcac tcaaggtaaa
      121 gttcaacagc gtttttggct actacattga gatcagcaag gccaacctgc accacgcgcc
      181 cacggactac gaacgcaagc agacgctggt gaatgccgaa cgcttcacca cgccggagct
      241 caaagagtac gaagccaagg tgctggacgc gcaggaaaag atcgtggaga ttgagcggcg
      301 gctgtttgcc gagctgcggt cagcgattgc ggcggaggcg cggagaatcc ggcagacgtc
      361 gctggcgctg gccgaggtgg atgtgctggc ggcgctggcc tttattgcgc agaatcgggg
      421 ctattgccgt ccggctttca ttacgcaaac cgctcgagat tctcaagcag ccgaagacca
      481 ttttgcacct gacgccttct cgtgtgaggg tggcggagaa ctggaaatca ttgaaggccg
      541 acatcccgtg ctggagcaat cagacctgac ggggagcaac gatcgctttg ttcccaacga
      601 tctgtttctg aactccggat ctcactcgat cctgctgatc accgggccga acatgggcgg
      661 caagtccacg tatctgcggc agacggcgct gattgtgctg atggcgcaga tgggcggctt
      721 tgttccggca cgctcggcgc ggctgccggt aattgaccgc atcttcaccc gaatcggcgc
      781 gtcggacaat ctggcgcgcg gacggtcgac cttcatggta gagatgacgg agacggcggc
      841 gatcctgaac acggcaacgc cgcgctcgct gatcctgctg gatgagattg gccgcggcac
      901 cgcgacttac gatggattgg cgattgcgtg ggcagtgatt gagtacatcc actccagtag
      961 ccgggccaag acgctgttcg ctacgcacta tcacgagctc accgagctcg accggctgga
     1021 aggcgtgaag aacttccacg tctcagtgaa agagaatgcc ggcgggattg tgttcctgcg
     1081 caaggttgag cccggcgccg ccgatcgcag ctacggcatt gaagtggcca agctggccgg
     1141 gctgccgccg gaggtaattg ggcgggcacg ggaggtgctg cacgagcatg aaaacgccga
     1201 gcatgaagcc acggagcatc tttcgccggg cgcgcgagaa cccgagccgc agatgcagct
     1261 gacgatgttc actccgctgt cgcagaaaat cgtggaccgg ctgcgcgagg cggacgtcaa
     1321 ccggctgacc ccgctcgacg cacttaacct tctgagtgag ctgaagaagc agctgggctg
     1381 aggagattgc caggattgcc aaggagccag cgctgacggc agtctggatg atgctaaacg
     1441 ctccccacaa agatattgcg aagggcgaag aaatgtggta ctctggggaa ttgcggctca
     1501 ggccggggca gccaggcagg cagcctaaac gctgtttgac aactgaataa atgcgatctg
     1561 gcggtgggca ggtggagccg ggtggcaggt attaactaat tagtacaatt cctgtgaaca
     1621 cctaggctgt tacaccggac gttgtgcctg cgaaaccatc cccggagtgc ttccctctaa
     1681 gtcctttgtt ttcggggtgc ctgtacccct cccccccaca caagaggttt acaaaagaat
     1741 aactttcatg ggtgggcagc ggcgggtagg gacagctcat tccgctaaac cagttcccgt
     1801 cagggcttcg ccggcgatcc agagagcgca gccgagcatg ggcaggtcct tgatgatgaa
     1861 tccgcccgga cctgctagaa acgggatcac gtggctatgg tcgattgtcc ccggggtgct
     1921 caagaggaag ctgttagtca ggaggaaagt gacgatcgcg ccaatgcttc ccgcgagaga
     1981 gtcgcgaggc gagaacggac gaagggcgat cagaacggcg gtggcaatat caatgacgtc
     2041 aataatggtt gagacgtttg aagcgtccac acggtataca tccatgcgat caacgggctg
     2101 tgcgcgatga gcggctgtat gccagcggct tcttccggcg tgaacttctg caatccgaac
     2161 cagagaagga tcaggaccag cgagtaacga accagaaaac tgccggatga gttcagtata
     2221 ggggtaaggg attccgcagg gtgatgcagc ctggactggg tctgcgcgat tgctgccata
     2281 atgtttgctc gttgaccgga tgcgaccctg cagcttcggc ctgccgccgc cagattcaca
     2341 tcgggagaat ttccagacag cgcttgtgat tcgcacgagc gcaaaaggtg acagcgccgc
     2401 aaaccgatga tcattccagc agagattggg ttcgtataat cagagcgatg cgaaagaaga
     2461 acacgcaaga cttacgccgg caggttgggc agctgctgat catgggctat gacggcctgg
     2521 agattgacgg caagctgcgc actacgctaa gcacgctcca gccgggcggc gtgatcctgt
     2581 tcgcgcgcaa cattgagaca ccgcagcaga cctggaatct gctcagggac tcgcaggcga
     2641 ccacgccagt gccgatgttc ctatgcgtcg atctggaagg cgggacagtg gatcgcctta
     2701 agaaggtgat tgcgccggcg ccggcagtgg aagacgtgtt tcgtaccgga gatcgcaagc
     2761 tgtggcgcat gcacggcaac attcttggtc tggaagcacg ggcactcggg ttcaacacgg
     2821 atttcacgcc ggtattcgat cttggattgc cggcttcgcg ctcggtgctg acgtcgcgca
     2881 cggcgtccgc gaattccaaa gatgtgattg cctatgcgcg cgagtgcctg aagggattga
     2941 aagccgcgaa ggtccttggc tgcggaaagc attttcccgg gctcggtgag gcgaacctgg
     3001 atacgcacca tgagctgcct tcgatcaaga agccgtggaa gaagctgtgg gctgaggatc
     3061 tgctgccgta ccgcgaactg aagaaccaga tcccgtttgt gatggtggcg catgcttcgt
     3121 atcctgacgt gaccaaagac aagctgccgg cttcgctctc acgcaagtgg atgcaggagg
     3181 tcttgaggaa gaagatcggc ttccgcaacc tgatcatctc tgacgatctg gagatgggcg
     3241 gcgtactctc gactggtccg atcgaggaag ttgcggtgga gacgctgcgg gccggagcag
     3301 acatgtatct cgtctgccac aaccaggagc tggtgtggcg cggatacgaa gcagtgcttc
     3361 gcgaagcgga gaaagaccgg cgctttgccg cgtatgttga gcaagcggca aagcgggtgc
     3421 tggcgctgaa gcggcggtca ggagagctgc gcggctttgc tcgcgagccg aaggcgcgag
     3481 tggtggcaaa cctgaaaaag ctggtggaga atttcagcaa agtggttgcg gagcacagcg
     3541 cttgattgta gccggggtga tgagcggcac atcagccgat ggcattgatg tggcgctggt
     3601 ggagatcgct ggcgatgatc agctcagggt gaggctgctc gcgcatcatc atttccctta
     3661 tccttcacgc gtgcggcagg cggtgctggc ggcgatgaat gcaatgcgcg ccagcgtggc
     3721 cgacctttcc cggctcaact tcgttctggg cgagctttac gccgacgcag tgagcaaggc
     3781 tgttcagcgg tctggcatgg ccaggctgga actggtcggc tgccacggtc agacgatcta
     3841 tcaccagggt gagaccgcaa gctaccttgg ccgcaaggtt gcgtgtacgt ggcagaccgg
     3901 tgaaggttca gttatcgccc tccgactggg tgtcccagtt gtgtcggatt tccgccctgc
     3961 cgatatggcg gccggcggca agggtgcacc gctggttccc ttcctggatc acgctctgtt
     4021 ccgggatgca agtgccggcc gcattgtcca gaacattggc gggattgcga atctctcggt
     4081 gatttcggca aacgccaggg cggaagatgt gatcgccttc gataccggcc caggcaacat
     4141 ggtgattgat cagctcatgc aaaagctgtt cggcaagaat tatgacggca atggtgcaat
     4201 ggccgcgcac ggcgaggtgc ttgagccagt gttgcgagaa ttcctgcgac gaccattctt
     4261 ccgcaagtca ccgccgaaga cggctggacg agaggaattt gggcgagagt tcgcccaaga
     4321 atttctccgc aagtgcggac gggcagataa agccgacgtg attgccacgg caacggcgct
     4381 tacggcgcgt tcgatcagcg atgcgatcag gtgttttgcg ctgcctcgag gtgatttccg
     4441 tgactacatc gtctccggcg gaggaacaca gaatagcact ttgatgaaga tgctgaggga
     4501 atcgttaagg ccgctcggct tggccgtgcg aaccactgac gatcttggca tcgccagcca
     4561 ggcgaaagag gcagttgcat ttgctgtgct ggcgtatcaa acctggcttc gccgcccagg
     4621 gaatgtgccg tcggcaacgg gagcaaagcg cgcggtggtg ctcggaaaga tttcgcatgt
     4681 ttaaccacaa agcccatgaa ggcttacgaa ggatctcaga acgaaagctc cttcgtgctc
     4741 ctttgtgtcc ttcatggttg atcttctttc ttcttctctc ctgcgtctcc tgctctccgc
     4801 atccccggcc ggatacgttg gtgatgatca tagagagcag cccgttgaac cttgatccgc
     4861 gagtgggcac cgatgcgcaa tcagagcgca ttgccggttt gatcttcgat tcgctggtcc
     4921 ggaaagatga tcatttcaaa ctgcagccat ggcttgccga aaaatgggaa atttcagatc
     4981 cgcagacata catttttcat cttcgcaaga acgtccgctt tcatgacggg cgtcctctga
     5041 ccgcgcgcga cgtgaagtgg acgctggatt cttacagcaa cggaacgctg gtgagcccgc
     5101 gagtggcaac gtaccggcac gtaaagtcgg ttgaagcgcc ggatgattca accgtcatta
     5161 tccggctcac tgagccggac gcgacactgc tctggaacct gagcgatggc gcattcggcg
     5221 tggttcctca cggcagcggg aaggaattga gcaaaaaccc ggtcggttcc gggccgttta
     5281 agtttgtgct caatgagccg gacagtcagg ttctgctcaa tcgcaacgat cagtattgga
     5341 acacgccgcc gaaagtggag catgtacgtt t
//
LOCUS       DASQYP010000119         2691 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_71407, whole genome shotgun sequence.
ACCESSION   DASQYP010000119 DASQYP010000000
VERSION     DASQYP010000119.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 2691)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2691)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2691
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_71407"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2223
                     /gene="secA"
                     /locus_tag="VE783_03835"
     CDS             <1..2223
                     /gene="secA"
                     /locus_tag="VE783_03835"
                     /inference="COORDINATES: protein motif:HMM:NF009538.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006605 - protein targeting [Evidence IEA];
                     GO_process: GO:0006886 - intracellular protein transport
                     [Evidence IEA];
                     GO_process: GO:0017038 - protein import [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecA"
                     /protein_id="HYX52555.1"
                     /translation="ARTPLIISGSSDESTDKYDRADRVVPHLEKGEEIEKAPGEPKEY
                     TGDFVVDEKHRNATITDQGWEKVERMLGIDNIADPDNWAMKHHVETAVKAHSLYRKDV
                     EYVVKDGEVIIVDEFTGRLMPGRRWSDGLHQAIEAKEKVKIERESQTLATITFQNYFR
                     MYKKLAGMTGTAETEAPEFDKIYKLAVMVIPTNRQLLRVENPDVVYRTEKEKYYAVAD
                     EIQKVAVEGRPILVGTTSIEKSERLSDLLKKKNVKHVVLNAKFHEKEAEIVAQAGRLN
                     AVTIATNMAGRGTDILLGGNAEFMARQEAVKKGIAQQLRSAGGEVALQQDTSQAIVFY
                     YNGLEYQCPADKWNDIYAKYKKDTDAEHDKVVAVGGLHILGTERHEARRIDNQLRGRA
                     GRQGDPGSSRFYLSLEDDLMRIFAKAWVSTLLQKLGMEEGVPIESRMISKRIEAAQKA
                     VEAQNFESRKHVLEYDDVMNKQRVAVYGLRRELLSGIDQKELILDEYVTAMVGDAMDR
                     FIPKQAHADQWDVDGLRKYVLEQFGLDMSKAGVNADQLNRQELGDAIFDKLKESYDQK
                     EHQLGADAMRYHERMIMLSVIDTQWKDHLLNMDHLKEGIGLRGYGQHDPLVEYKRESF
                     DMFEQMMQRFQEETVRYLFHMQIVEAPSTAAAAESGNGDQETAAPQRRRAQTSVDDLE
                     AQFQRRKKKELQEAQMAGTNGNTSPQQVVRGQAKVGRNDPCPCGSGKKYKKCHGVAAG
                     "
     gene            complement(2240..2536)
                     /locus_tag="VE783_03840"
     CDS             complement(2240..2536)
                     /locus_tag="VE783_03840"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52556.1"
                     /translation="MARVDPERSQQFNTTLVLSAIIAAILALCIVGILYGCARQTTVK
                     PKYSAPSTTGAALVRLAALSTFTRSGMLLSARVNKPAHSVFVQQKTGAHHPGGS"
BASE COUNT          685 a          669 c          867 g          470 t
ORIGIN      
        1 gcgcgtacgc cgctgatcat cagcgggtca agcgacgaga gcacggacaa gtacgatcgc
       61 gccgaccgag ttgtaccgca cctggagaaa ggtgaggaga ttgagaaagc tcccggcgag
      121 ccaaaggagt acaccggcga ctttgtggta gatgagaagc acaggaacgc cacgatcacc
      181 gatcagggct gggaaaaagt tgagcggatg ctgggcattg ataacattgc cgatcccgac
      241 aactgggcga tgaagcacca cgttgaaacc gcggtgaaag cgcactcact ctaccgcaaa
      301 gacgtggagt acgtggtaaa agacggcgaa gtgatcatcg tggacgagtt caccggccga
      361 ctgatgccgg gacgccgctg gtcagacggg ttgcaccagg cgattgaagc caaggaaaaa
      421 gtaaagatcg aacgcgaaag ccagacgctg gcgaccatca ccttccagaa ttatttccgc
      481 atgtacaaga agcttgcggg aatgaccgga acagctgaaa cggaagcgcc ggagttcgac
      541 aagatttaca agctggcggt aatggtaatt ccgaccaacc ggcaactgct acgtgttgag
      601 aacccggatg tggtttaccg caccgaaaaa gaaaaatact acgccgttgc ggacgagata
      661 cagaaggtgg ccgtggaagg gcggccgatt ctggtgggta ccacgtcgat tgaaaaatca
      721 gagcggcttt ctgacctgct gaagaagaag aacgtgaagc acgtggtgct gaacgccaag
      781 ttccatgaaa aggaagccga gattgtagcc caggccggcc ggctgaacgc ggtgacaatc
      841 gcaaccaaca tggcaggccg cggaaccgac attctgctgg gtggcaacgc cgaattcatg
      901 gcgcggcagg aggcagtgaa gaaagggatc gcacagcagc tgcgttcggc gggcggcgaa
      961 gtggctctgc aacaggacac ttctcaggcg attgttttct actacaacgg ccttgagtac
     1021 cagtgtccgg cggacaagtg gaacgacatt tacgcgaagt acaagaaaga tacggacgcg
     1081 gaacacgaca aagttgttgc ggtgggcggc ctgcacattc tgggtacaga gcggcacgag
     1141 gcacggcgca tcgataacca gttgcgcgga cgcgcaggac gccagggcga tcccggatcc
     1201 tctcgtttct atctgtcgct ggaagatgac ctgatgcgca tcttcgccaa agcatgggtt
     1261 tccacgctgc tgcagaagct gggcatggaa gaaggcgtgc cgattgagtc gcgcatgatc
     1321 tccaagcgca ttgaagccgc gcagaaggcc gtggaagcac agaactttga gtcgcgcaaa
     1381 cacgtgctgg aatatgacga tgtaatgaac aagcagcgcg tggcagtgta cggcttgcgg
     1441 cgcgaactgc tctcgggcat cgaccagaaa gagctgatcc tggatgagta tgtgacggca
     1501 atggtgggcg atgcgatgga ccggttcatt ccgaagcagg cccatgccga ccagtgggac
     1561 gtggacggat tgcgaaagta cgtgctggag cagttcgggc tggatatgag caaggccggt
     1621 gtcaatgccg accagcttaa ccggcaggaa ctgggcgatg cgatctttga caagctgaaa
     1681 gaatcttacg atcagaaaga gcaccagctt ggcgccgacg cgatgcggta ccacgaacgc
     1741 atgatcatgc tgagcgtgat cgacacgcag tggaaggacc atctgctgaa catggaccac
     1801 ctgaaggaag gaattgggct gcgcggctat gggcagcacg atcctctggt ggagtacaag
     1861 cgcgagtcgt tcgacatgtt tgaacagatg atgcaacgct ttcaggaaga aacggtccgc
     1921 tacctcttcc atatgcagat tgtggaagcg ccttctaccg ctgctgcggc agagagcggt
     1981 aatggcgatc aagagactgc ggctccgcaa cgccggcgcg cgcagacttc tgtggatgac
     2041 ctggaggcgc aattccagcg tcggaaaaag aaggagcttc aggaagcgca gatggccggg
     2101 accaatggca acacgtcgcc acagcaggtg gtgcgcggcc aggcgaaggt tggcaggaac
     2161 gatccctgcc cgtgcggctc agggaaaaag tataagaagt gccacggagt ggcggcagga
     2221 taatgccgtt cgcgaaacgt cagcttccgc cggggtgatg agccccggtt ttttgctgca
     2281 cgaatacgga gtgcgcaggt ttgtttacgc gggcggacag caacattcct gagcgggtga
     2341 aggtgctcag cgcagccagc cgaaccaacg ccgcacccgt tgtggaggga gcggaatact
     2401 tgggcttaac ggtggtctgg cgggcgcagc catagagaat tcccacgatg cagagcgcca
     2461 gaatggctgc gattatggca gaaagaacca gagtagtatt gaactgctga ctgcgttcgg
     2521 gatcaactcg ggccatttct cttcctcaaa attgttggat gccaaccctt caggggggta
     2581 tgccggacgt tcagctcagg gtacggactc tggaggaatc agctctcgca aaaagaaagc
     2641 ggtgcagaga ttctgcaccg ccggatctga gttactgaag ttagcgattg c
//
LOCUS       DASQYP010000120         8032 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_259203, whole genome shotgun sequence.
ACCESSION   DASQYP010000120 DASQYP010000000
VERSION     DASQYP010000120.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 8032)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8032)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8032
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_259203"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..303)
                     /locus_tag="VE783_03845"
     CDS             complement(<1..303)
                     /locus_tag="VE783_03845"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52557.1"
                     /translation="MCRDCASNYARHFRGNSPCSQCNGRLHGRGTFDFATLNDAAAAN
                     SSGTITISGTCTEAVVLAGASNLTIIGANGASLVDPGDAVPNFGAVLEIDDSQNINV"
     gene            complement(1877..2344)
                     /locus_tag="VE783_03850"
     CDS             complement(1877..2344)
                     /locus_tag="VE783_03850"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52558.1"
                     /translation="MTDLKALAHELLEEAQQSLQAEGHLNPTAVVITPKQNLIFDLEF
                     ESDDEREELYAEMVEVAQAENASAIITVNDVYLGDADAPIKLEGEGWGELAASPTEAI
                     VVTISGSGFPTWSLLCPYYRREEQFVFEPAREMMNPAGEVDLLGDWTRKTGTA"
     gene            complement(2341..3630)
                     /gene="lysA"
                     /locus_tag="VE783_03855"
     CDS             complement(2341..3630)
                     /gene="lysA"
                     /locus_tag="VE783_03855"
                     /EC_number="4.1.1.20"
                     /inference="COORDINATES: protein motif:HMM:TIGR01048.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008836 - diaminopimelate decarboxylase
                     activity [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="diaminopimelate decarboxylase"
                     /protein_id="HYX52559.1"
                     /translation="MLSRPPAFIYNKGILHCEKTSLPELAERFGTPLYVYSVTAIQQR
                     FKTLDRAFHRTPHTICYAVKANSNLSILRMLAKFGCGFDIVSGGELERVRRAQKRAVK
                     KIVFSGVGKTADEIKLALRSGILLFNVESEGELELLGQCATELRKTARIAFRVNPDVS
                     AETHPYISTGQREHKFGVPITSARELYQRGAANRYLQITGVSLHIGSQITDVTPFRAA
                     VERAVELTAQLRADGHTIEYLDAGGGLGISYDSSKPIDFNAQTRAYAEAITGPMEKLG
                     KARPHLLLEPGRSIVGPAGALLTRVIYQKRNGEKRFTIVDAAMNDLLRPSLYSARHEI
                     ATVNLEDLQSPVRNADVCGPVCETGDFLARDVSLPAVESGGLLCVLDAGAYGMSLASN
                     YNTRARAAEVLVEGRKARLVRRRERLQELLAAEVECL"
     gene            complement(3709..5448)
                     /locus_tag="VE783_03860"
     CDS             complement(3709..5448)
                     /locus_tag="VE783_03860"
                     /inference="COORDINATES: protein motif:HMM:NF018884.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GAF domain-containing SpoIIE family protein
                     phosphatase"
                     /protein_id="HYX52560.1"
                     /translation="MVTSAPPPRMDVEALLIEVADVLNTTLDLDTLLQRVAEVVKRVI
                     DYEIFSILLLNERHQDLRFRFQIGHLPEVAERIRVKVGEGVTGRAAKERRTILVDDVS
                     HEKEYIEAVPRVRSELAVPLINKNRVIGVMDLEAREKGYFKEEHARLLTLIASRIAVS
                     LENARLYTRVSRQASTLVVLNEISRELTSILNLDQLLKRVGDLLVKLIDYQMFSILLL
                     DENKEKLVHRFSVRFKENIQLKHDIPLGRGLVGAAALERKAVMVADVTKDPRYIKANP
                     ETRSELVVPLIHKDRVIGVLDLEHTRRGYFTEDHVRTITTLAAQIAIAIENATLYERI
                     AKEEQRMERDLAMAREVQHHLLPPTCPALKNAEVAARFNPAHAIGGDMYDFLDYKQPR
                     ACLIVSDVSGKGAPAALYAALVSGIIRSIAPAEPSPAQMLGSVNHSLNQRRLDANYVV
                     LCCALWDDEKKIMRVANSGLPRPIYCHKGHAHMIEAAGLPLGMFSDAAYDETTIHAQP
                     GDVFVFFSDGIVDASNRKDEQFGRVRIEHVIDENADKSAQELVDGLFSAAAEFSAGAP
                     VFDDQTVVVLRVK"
     gene            complement(5548..6267)
                     /gene="deoC"
                     /locus_tag="VE783_03865"
     CDS             complement(5548..6267)
                     /gene="deoC"
                     /locus_tag="VE783_03865"
                     /EC_number="4.1.2.4"
                     /inference="COORDINATES: protein motif:HMM:TIGR00126.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004139 - deoxyribose-phosphate aldolase
                     activity [Evidence IEA];
                     GO_process: GO:0009264 - deoxyribonucleotide catabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="deoxyribose-phosphate aldolase"
                     /protein_id="HYX52561.1"
                     /translation="MSQTLTDSLQQVRGWQALAAEIDHTILKPDTTREQIVRLCEEAA
                     FFNFASVCISPWWISVARSILSGTPVKVATTIGFPHGVNHTTVKRFEAEEAIRMGAQE
                     LDMVQNVGALRSGDRMSVQNDIASVVEVAHASGAIVKVILETPLLTLEEKIVSCQICL
                     AAHADFVKTATGFNGGATSDDVTLMRGVVGRHAGVKASGGIRTAATAQQMIDAGANRI
                     GTSSGVAIMHELGAPEFHPRG"
     gene            complement(6335..6856)
                     /gene="hpt"
                     /locus_tag="VE783_03870"
     CDS             complement(6335..6856)
                     /gene="hpt"
                     /locus_tag="VE783_03870"
                     /EC_number="2.4.2.8"
                     /inference="COORDINATES: protein motif:HMM:TIGR01203.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006166 - purine ribonucleoside salvage
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hypoxanthine phosphoribosyltransferase"
                     /protein_id="HYX52562.1"
                     /translation="MEVLVSREQIAEAVARIGQQITQDFAGETVVLLGVLKGACMFLS
                     DLARQIHLDATFDFIAVRSYGTKKESAGEVQMIKDVTTPLQGQNVILVEDILDTGLTL
                     TFVRKLLLAHQPRAFKIATLLDKPSRRVAQIQADYTGFQIPDKFVVGYGLDFAERYRN
                     LPDICALNDGDLK"
     gene            complement(6959..7396)
                     /locus_tag="VE783_03875"
     CDS             complement(6959..7396)
                     /locus_tag="VE783_03875"
                     /inference="COORDINATES: protein motif:HMM:NF019149.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000150 - DNA strand exchange activity
                     [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase family protein"
                     /protein_id="HYX52563.1"
                     /translation="MAKVERIREVVTGSVDLDYVRQKTEAGWKLVAMEWRREIAGDEP
                     QQPIIVEEIPYGLRVASDCSRLEEDPDERAVLVQMMELIVQDYSITLVASELNKRGLR
                     TREGGYWTPVSVFNMLPRLIEVGPHIFNSDDWETRKARLLKMV"
     gene            complement(7579..>8032)
                     /locus_tag="VE783_03880"
     CDS             complement(7579..>8032)
                     /locus_tag="VE783_03880"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF024812.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HYX52564.1"
                     /translation="EIYNYYVLNTPVTFDVEPYSVERRLPWFQQFGETGRYRLLVAED
                     SGTVVGYAGTTRFRPKAAYDTTVETTIYCADGAARRGLGTQLYQALFETIEGEDVHHI
                     VAGYTLPNEGSRRLHERLGFEPVGIFHEVGRKFGRYWDVAWTERPLKL"
BASE COUNT         1639 a         2384 c         2221 g         1788 t
ORIGIN      
        1 gacgttgatg ttctgcgaat catcaatctc cagcactgcg ccgaaattcg ggaccgcatc
       61 gccgggatct accagtgacg cgccattcgc accgatgatg gtcaggttgc ttgctccggc
      121 aagcaccacg gcttccgtgc aggtgccgga tatggtgatc gtgccagatg agttcgctgc
      181 tgcggcatcg ttcagcgtcg cgaagtcaaa tgttccgcgc ccgtgcagcc taccgttaca
      241 ttggctgcac gggctgttcc cgcgaaaatg gcgagcataa ttactggcac aatcacgaca
      301 cacggttttg agttctttac atgggacata ggttcgcctt gcgctccttg gagacgtctt
      361 gagttttggt tttgggggaa gaacttggcg agctggggtc ggcttgctaa gcgcgaccga
      421 ttgaacccca gagctgattg agagtcaata ctaaattgtg ctgggcgacc gctgaagcca
      481 gttaaggcac gcagacttca agccagactg ggcgttgcgg gatgcaaggg ctgggatgga
      541 gctaggggct aggggctagg ggctaaaaca caagaagccc cgagtttggt tgacccattc
      601 gcctcgacca gcggttcgct atagaccctt gccgacctgc tttctctgcc taattccttg
      661 cggaactcac aaagtgcgat ctttaatcag cttgcgctaa agcttgggct ccgggctcac
      721 caccaaccgg gcaaatcggt caacacctcg gggcttctat tttgacctcc gacatctcct
      781 gttctcctca accagcagtt cgctatagac cctaactggc cctctggctg cttccagctt
      841 cggtctcttc cgccgatcgc cgtttccagt aatcggggtt tttgacttgg ccgtgctgcc
      901 gtgaccttgc ttgggtcccg gtactcgcca ccaaccggga aaacgtttga gatgtcaaag
      961 aacgagtgtg aagttactcc tctctatacg gcagtcaatc tttttcgcgc gactgaatct
     1021 cctctgaaat caggagctta caagccatcc acaaagccgt gcagcaactc cggtgcacgg
     1081 ggttactaaa gtacagcaac cacgcggtat tttcgcaata gcggccttca ttaaggttgt
     1141 gcaaatccgg accacatgca gtgtttatgc gggtccgtac caatgctgtt ctctcacgcg
     1201 aacgccgagt tgcgccagca agaatgtttt tcgttcagtg ctcggcgtcg cggtggggtc
     1261 ctcttcttga tcctggggac gcgtactcat tcgcagttga cctctatcgc gcacggggct
     1321 ataaacgccc ccgaatatcc cgtaggaggg tatttagggc tcaggttccc ggcaaatcca
     1381 aaggaggtac cgtgaaaaga ggcgtactgt acgttgttgc cgttatcgtg ttcgcagtgg
     1441 cgatcacgct ttccgctccc accttgcttg gttcatctgg tctgcatgcc gttggcgccc
     1501 cccaatcagc cgtaaccgtt gcgcaagaca gcgtgtccgc gcagcctgag gtcataaaag
     1561 ccacaaaagc tcgaacttta gaggcgaaaa agttgcgcgg attctgcgcc tgcagctgca
     1621 gttccgtgcc taattgcaat accagcgctg attgcggcgg gaatgcctgc tccgcgttca
     1681 tctcctgctg cgtgaaaccc ggacagggaa gctcggccgt ggccgcgaaa tgcttgagcg
     1741 ccaagccacc gacgactgaa cagccgatta ccagaaaatc aattgcggca aactgattct
     1801 gtaccgctgc ttggttcagt catgcgctga atcaatcaag gcggttttgg tttggctaat
     1861 tactaattgc ttctgctcac gccgtcccgg tctttcgggt ccagtcgcca agcaggtcca
     1921 cctcgccggc tggattcatc atttcccgcg ccggctcaaa cacaaactgc tcttcccgcc
     1981 gatagtaggg gcacagcagg ctccaggtgg ggaagccgct gcctgagatc gttaccacaa
     2041 tggcttctgt gggcgaggct gctaactcgc cccagccttc accttccagc ttgatcggag
     2101 catcggcatc accaagatac acgtcgttga ccgtgatgat ggctgatgca ttttccgcct
     2161 gggcaacttc caccatctcg gcgtaaagct cttcgcgttc atcgtcgctt tcaaactcca
     2221 ggtcaaagat gaggttttgc tttggtgtga tcaccaccgc agtcggattc agatgacctt
     2281 ctgcctgcaa cgattgttgc gcctcttcaa gaagctcatg tgccagcgct ttcaaatcgg
     2341 tcataagcac tcgacctcag cagccagaag ctcctgcagc cgttcgcgcc ggcgcaccag
     2401 ccttgccttt ctgccttcca ccagcacctc ggcagcgcgc gctcgtgtgt tgtaattcga
     2461 cgccagtgac atgccgtatg ctcccgcatc cagcacgcac agcagaccgc cagactctac
     2521 ggcgggaagg gaaacatcgc gggcaaggaa atctccggtc tcgcagaccg gcccgcaaac
     2581 gtccgcattg cgtaccggcg actgcaggtc ttcaaggttc accgtcgcaa tctcatgccg
     2641 cgcactgtaa agcgacggtc gcagcagatc attcatcgcc gcatccacaa tcgtgaagcg
     2701 cttctcgcca ttgcgcttct ggtagatcac gcgcgtgagc aacgcgcctg ccggcccaac
     2761 gattgagcgg cctggttcca gcagcagatg cggacgcgcc ttgccgagct tctccatcgg
     2821 accggtgatt gcctcagcgt acgcgcgagt ctgtgcattg aagtcgatcg gcttgctgct
     2881 gtcgtaggag attccgagtc cgcctcctgc atccaggtat tcgatcgtgt ggccatcggc
     2941 cctgagctgt gcggttagct ccacagcgcg ttccaccgca gcacgaaatg gagtgacgtc
     3001 agtgatttgc gatccaatgt gaagactcac gcccgtgatt tgcagatatc tattggccgc
     3061 acctcgctga tagagctcgc gcgcgctcgt gatcggcacg ccgaatttgt gctcgcgctg
     3121 gccggtagag atataaggat gcgtttccgc cgaaacgtcc gggttaacgc gaaacgcaat
     3181 cctcgccgtc ttgcgcagct ccgtggcgca ctgacccagc agctcaagct caccttcgct
     3241 ctcaacgttg aaaagcagaa tgccgctacg cagcgccagc ttgatctcgt cggccgtctt
     3301 gcccacaccg gagaaaacga tttttttcac ggcgcgcttt tgtgcccggc gcacgcgctc
     3361 cagctcgccg ccggaaacaa tgtcgaaccc acagccgaat ttcgccagca tgcgcaggat
     3421 gctgaggttc gaattcgctt ttaccgcgta acagatggtg tgcggtgtgc gatgaaacgc
     3481 ccgatccagc gtcttgaagc gttgttggat ggctgttacc gaataaacgt agagcggcgt
     3541 accgaatcgc tctgccagtt caggcagcga ggttttttcg caatgcagaa tccctttgtt
     3601 gtaaatgaat gccggaggac ggctgagcat gatggccgat tctatcaggt gactcacacg
     3661 cacaaaaaag tcacgggctg ctgctgaacg gtggcaacgc cgcgtcggtt acttcactct
     3721 cagcaccacc acggtttgat catcgaagac cggggcgccg gcggaaaatt ctgccgccgc
     3781 gctgaacagt ccgtctacta gttcctgcgc ggatttgtcg gcgttctcat cgatcacatg
     3841 ctcgatgcga acccgcccga actgttcgtc cttgcgattg ctggcatcca caattccgtc
     3901 actaaagaaa acgaacacgt cgcccggctg cgcgtggatg gtggtctcgt catacgcagc
     3961 gtcagaaaac attcccagag gcagacctgc ggcctcaatc atgtgggcat gacccttgtg
     4021 gcaatagatg gggcggggaa gtcctgaatt ggccacgcgc attatcttct tttcgtcgtc
     4081 ccacagcgcg caacaaagaa caacgtagtt tgcatccagg cgccgctgat tcagggagtg
     4141 attcacagat cccagcatct gtgccgggga gggctcggct ggagcaatgc tgcgaataat
     4201 gccgctgacc agggcggcat acagagcagc cggcgcgcct ttgccactca cgtcactcac
     4261 aatcaggcat gcacgcggtt gtttgtagtc caggaagtcg tacatgtcgc cgccaatggc
     4321 gtgcgccgga ttgaatcgcg cggcgacttc cgcattcttc agcgccggac aggtaggcgg
     4381 cagcagatgg tgctggacct cgcgcgccat ggccaggtcg cgttccatcc gttgctcttc
     4441 tttggcgata cgctcgtata gcgtagcgtt ctcaatcgcg atggcaattt gcgcagccag
     4501 cgtcgtgatg gtacgcacgt gatcttcagt gaagtagccg cgccgagtgt gctcgagatc
     4561 aagcacgccg atgaccctgt ctttgtggat gagcggcacc accagctctg agcgcgtttc
     4621 cgggttggcc ttgatgtaac gcggatcttt agtcacatcg gccaccatta cggctttgcg
     4681 ctccagcgcc gccgccccta ccagcccgcg gcccagcgga atgtcatgtt tgagctgaat
     4741 gttctctttg aaacgcaccg agaaccgatg caccagcttt tccttgttct catccagcag
     4801 caggattgaa aacatctggt aatcaatcag cttaaccagc aggtcgccaa cgcgcttgag
     4861 cagctgatca aggttcagga tcgacgtaag ctcgcggcta atctcattga gcaccaccag
     4921 tgtgctcgcc tgccgcgaga cacgcgtata aagccgcgcg ttctccaaac tcactgcaat
     4981 ccgcgacgca atcagtgtga gcagccgcgc atgctcttcc ttgaagtagc ctttctcgcg
     5041 cgcttcaagg tccatcacgc cgatcacgcg gttcttgttg atgagcggca cggcaagttc
     5101 cgagcgcact ctgggaactg cttcaatgta ttccttctcg tggctaacgt cgtccaccag
     5161 gatggtgcgg cgctccttgg cggctcgtcc cgttactcct tcgcccactt ttacgcgaat
     5221 gcgctccgcg acttcgggca ggtggccgat ctgaaagcgg aagcggagat cctgatgccg
     5281 ttcgttgagc aacaggatgg aaaagatctc gtaatcgatg acgcgtttta ctacttcagc
     5341 cacgcgttga aggagggtat ccaggtccag cgtggtattg agcacgtcag ccacttcaat
     5401 cagaagggct tcaacatcca tgcgcggagg cggtgcggag gtaaccatcg tgtccactgt
     5461 tcatgatatc agcttgaaaa atgcggaccg gtggaagcga gagggcttcg gatgtggtaa
     5521 gcgctgttca ggataagcgg ctacagatta cccgcgcgga tggaactccg gcgcgccaag
     5581 ttcgtgcatg atcgccaccc cggagctggt tccgatccga ttggcgccgg catcaatcat
     5641 ctgctgtgca gtggcggccg ttcgtatccc gccggaggct ttcacgccgg cgtgcctgcc
     5701 caccactccc cgcatgagcg tgacatcatc ggaggtagcg ccgccgttga agccggtggc
     5761 ggtcttcaca aaatcggcgt gcgcggcaag gcagatctgg cagctcacga tcttttcttc
     5821 aagggtgagc agcggcgttt ccaggatcac cttcacgatt gcccctgacg catgcgccac
     5881 ttccaccacg gaagcaatgt cgttctgcac gctcatcctg tcgccggacc tgagcgcgcc
     5941 gacgttctgc accatgtcga gttcctgagc gcccatgcgg atcgcttctt ccgcctcaaa
     6001 gcgctttacg gtggtatggt tgacgccatg cgggaagccg attgtggttg ccactttaac
     6061 gggcgtgccg ctcaatattg atctggctac gctgatccac cacgggctta tgcagactga
     6121 agcaaaattg aagaaggcgg cttcttcaca caaacggaca atctgctcac gggtagtatc
     6181 cggcttgaga atggtgtggt ctatttccgc ggcgagagcc tgccagccgc ggacctgctg
     6241 cagggagtca gtcagagtct gggacatcca gaacggattt tatcaccaca catttgtggt
     6301 tgggaggtaa agttacgcca gcatcgatga agatttattt caggtcgcca tcattcaggg
     6361 cgcatatgtc cggcaggttg cgatagcgct cggcaaagtc caggccgtag ccgaccacga
     6421 acttatcggg aatctggaag ccggtgtagt cagcctgaat ctgggcgacc cggcgtgaag
     6481 gcttatccag aagcgtggcg atcttgaatg cccgcggctg atgcgccagc aacagctttc
     6541 ggacaaaggt caacgtcagc ccggtatcca gaatgtcttc caccaggatc acattctgtc
     6601 cctgcaacgg agtggttacg tccttgatca tctgcacttc gccggcgctt tctttctttg
     6661 tgccatagct gcgcaccgcg atgaaatcaa acgttgcgtc caggtgaatc tggcgggcca
     6721 gatcgctcag gaacatgcag gcgcccttca ggacgcctag caaaacaacg gtttccccgg
     6781 caaaatcctg cgtgatctgc tgtccaatgc gggcaacagc ttcagcaatc tgttcgcggc
     6841 tgacgagtac ttccatgatt ttttctgggc aggggattgt ctcacaagag acgggcggca
     6901 acaaacaggc gggagggcag ttcgcccggc acgggcgtgc cgggcgaatg ggcaaaatct
     6961 agaccatctt cagaagccgt gctttgcgcg tctcccaatc gtcgctgttg aagatgtgtg
     7021 ggccaacctc aatcagcctg ggcagcatgt tgaacacgga aacgggcgtc cagtagccgc
     7081 cctctcgcgt acgcaggccg cgcttgttca gctcagaagc caccagcgta atcgagtagt
     7141 cctgaacgat cagctccatc atctgcacca gcacggcgcg ttcatcggga tcttcctcaa
     7201 ggcggctaca atcgctcgcg acgcgtaaac cgtagggaat ctcctccaca ataattggct
     7261 gctgaggctc gtcgccggca atttcgcgcc gccattccat cgccaccagc ttccacccgg
     7321 cttccgtctt ctgccggaca tagtccaggt ccactgaccc ggttaccact tcgcgaatcc
     7381 gttccacctt ggccattgat gttgtctcct gtgaagctcg gttttttttt tgagcaggta
     7441 agatgccagc tgcggtgtgg gcagaactcc gaatcggccg aatagcttag gggtgaacag
     7501 caatgccgtg aggtgccagt actctgcgcg attccgggac tcagcgcgcg aaaatggaca
     7561 ctcaccgttg cgcgcagctc acagcttcag cggacgctcc gtccaggcca cgtcccagta
     7621 ccggccaaac ttccgcccca cttcatggaa gattcccact ggttcaaatc ccagccgttc
     7681 gtgcaaacgc cgcgaacctt cattgggcag cgtgtagcca gccacaatgt gatgaacgtc
     7741 ctctccttca atggtctcaa agagcgcctg atagagttgc gtgcccagcc ctcttcgggc
     7801 cgctccgtct gcacaataaa tggtggtctc cacggtggtg tcgtaggccg ccttgggacg
     7861 aaatcgcgtg gtacctgcat atccgactac cgttccagaa tcctccgcaa ccagcaggcg
     7921 ataacggccg gtttctccaa actgctggaa ccagggcagg cgcctttcca cgctgtaagg
     7981 ctccacatcg aaggtcaccg gtgtattcaa gacgtaatag ttgtagattt cg
//
LOCUS       DASQYP010000121         5136 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_195069, whole genome shotgun sequence.
ACCESSION   DASQYP010000121 DASQYP010000000
VERSION     DASQYP010000121.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 5136)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5136)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5136
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_195069"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..394)
                     /locus_tag="VE783_03885"
     CDS             complement(<1..394)
                     /locus_tag="VE783_03885"
                     /inference="COORDINATES: protein motif:HMM:NF013069.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HYX52565.1"
                     /translation="MANGGPSRLFILRPVATSLLMIGVLLVGIVAYRQLPVSALPQVD
                     YPTIEVTTFYPGASPDVMASSVTAPMERQFGQVPGLSQMTSTSSFGSSVITLQFTLEQ
                     NIDVAEQEVQAAINAATTFLPRDLPNPPI"
     gene            complement(455..1669)
                     /locus_tag="VE783_03890"
     CDS             complement(455..1669)
                     /locus_tag="VE783_03890"
                     /inference="COORDINATES: protein motif:HMM:NF008589.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MdtA/MuxA family multidrug efflux RND
                     transporter periplasmic adaptor subunit"
                     /protein_id="HYX52566.1"
                     /translation="MNLLPQFKGHLCRLSLAALLCALLAGCSSSPNPQAASKGDNKKG
                     QGRGGFNMTIPVAVAKAEMRDLPIYLNGLGSVEAFNTVVVKSRIDGQLVEIHFREGQE
                     VKEGELLAVIDPRPYQVQLSQAEATLYKDQSSLKDAELNFQRFQDLYKQGIIPQQQFD
                     TQKSLVGQLEGAVRADQAQIDTVKLNLNYTRITAPVSGRIGLRQVDIGNMVHASDPNG
                     LLVITQLQPIAVIFTLPADNISEVSKQMKGRQLEADAYSRDDQTKVAVGKLLTIDNQI
                     DPTTGTAKFKAVYENRDHALWPNQFVNVHLLLEVRKNNTVVPAAAIQRGPQGTYVFAV
                     KPDNTADMRKVTIAFSEGNVTAVSSGINPGDVVVTDGQDKLQPGTKVEIRGNGETPRP
                     GGQSGTQSGQGQ"
     gene            complement(1972..3591)
                     /locus_tag="VE783_03895"
     CDS             complement(1972..3591)
                     /locus_tag="VE783_03895"
                     /inference="COORDINATES: protein motif:HMM:NF012894.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OmpA family protein"
                     /protein_id="HYX52567.1"
                     /translation="MKRFLVVLALAGAAWAQQGGTMPQSAAPQQIQKMRAQNLNIGNT
                     PTPADMYCAGFISSEKVPDSHFVAGGWNTPDQTRFAGTADYVYLHGKDFKEGDRYQIV
                     RRVRDPNAYSMFSGQRWAINDAGTPYFELGYVRIIDVQKNTAVAIPELSCADFVPGDL
                     AVPFAEREAPKFRAVSLDRFAPPNGKPQGRIIMANEFDAYLGTKNKVYLSIGADKGLK
                     PGDYLRATRTYNSTYHDQVDKLSLYASALEDTQKDPAKFNDVASLPRRTLGDMIVLST
                     HRKSATAMILTALEEIKVGDVVEVMDVEAAPELKPVLPVSATQPTAAVAAEPAASANA
                     QPPRITCTASPATVRVGENSMITCDATSADNRPISIAFVANGGKLSSNRNQATLDTTD
                     TQPGPVTVRATAFDDRQLSAAAITTVNVEAGAAPAPTAQKLSDLDFKPNSAYVDNRSK
                     AILDDVALKLQQDPNTNVSLSGSTEELEPPRLANQRAENSKTYLTQSKGIDPQRVAVK
                     SGGTGRRVEIWTVPAGAPAPPEQPKSDQPKQ"
     gene            3863..>5136
                     /locus_tag="VE783_03900"
     CDS             3863..>5136
                     /locus_tag="VE783_03900"
                     /EC_number="4.2.1.10"
                     /inference="COORDINATES: protein motif:HMM:NF013640.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003855 - 3-dehydroquinate dehydratase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type I 3-dehydroquinate dehydratase"
                     /protein_id="HYX52568.1"
                     /translation="MVGNPNYGPRFLPARLPRLCVAIASTNPAELVQKADVAVRENPF
                     VEFRLDYLPKPALGLPKLKTFVEYHPEALIVATCRRVAAGGRFRGSIAAEVQLLAKAA
                     QQGCHLIDIELETAERLKPADFEKLRRSANLIISYHDYKATKKLDDILARMRKYPADF
                     FKIVTTANSLYDNVVMMKFLEKHSHEFQLIGACMGEQGVISRVLGVRAGSQFTFAAVN
                     PGEETAPGQLTARTLRETFRIDQVDVATRVYGVVGDPVAHSLSPAMLNAAFRRENANG
                     VYLALHAKSLDDLMACVRDIPIAGLSVTMPYKEEIVKHLDKTDPLTTKIGACNTVVRS
                     QEGKLYGFNTDVGGIVRPLETRIRLGGAKILVLGAGGSARAAVFGLKERGAEVYILNR
                     TAGPAQTLAKQAKAKAINRTMLKKMEFDVIINA"
BASE COUNT         1021 a         1504 c         1528 g         1083 t
ORIGIN      
        1 agatcggcgg gttcggcagg tcgcgaggaa ggaaagtggt tgccgcgttg atggcggcct
       61 gcacttcctg ctccgccacg tcaatgttct gttccagggt gaactgcagc gtgatgaccg
      121 agctgccgaa tgaactggta gaggtcatct ggctcaggcc gggaacctgg ccgaactgcc
      181 gctccatggg cgcggtgact gacgaagcca tgacatcagg gctcgcgccg ggataaaacg
      241 tggtgacttc aatggtggga tagtcaactt gcgggagcgc cgaaaccgga agctggcgat
      301 aggccacaat gcccaccagc agcacgccga tcatcagcag tgatgtggcg acaggccgca
      361 gaataaataa acgagatgga ccgccgttag ccatgaagca ttatctttgc ggaaagaaaa
      421 gcgcgttgcg ctgaagtgac atggatttct gctgttattg tccctggccc gactgcgtgc
      481 cggactggcc gccgggccgc ggcgtttcac cgttaccgcg aatttcaact ttcgtgccgg
      541 gctgaagctt gtcctggccg tcagtaacca ccacgtcgcc gggattgatg ccgctggaga
      601 cagccgtgac gttgccttca ctgaaggcga tggtcacttt tctcatgtcg gccgtgttgt
      661 ccggcttcac cgcaaacacg taagtgccct gcgggccgcg ctgaatggcg gcggcaggaa
      721 ccaccgtatt gttcttgcga acttccagca gcagatgcac attcacgaac tgattcggcc
      781 agagagcgtg atcgcgattt tcatacacgg ccttgaactt ggcggtgccg gtggtgggat
      841 caatctggtt atcgatggtg agcagctttc cgacggcaac tttggtttga tcgtcacggc
      901 tgtaagcatc ggcctcaagc tgccggccct tcatctgctt tgaaacttcg gaaatgttgt
      961 ccgcgggaag ggtgaagatc accgcaatcg gctgaagctg ggtgatcacc agcaatccgt
     1021 taggatcaga ggcgtgcacc atgttgccga tatcgacctg gcgcagaccg attcgtccgc
     1081 tcaccggagc cgtgatgcgc gtgtaattta ggttcagctt cactgtgtca atctgcgcct
     1141 ggtcggcgcg aactgcgccc tccagttggc cgacgagaga cttctgcgtg tcaaattgct
     1201 gctgcgggat gatgccctgc ttgtataagt cctgaaagcg ctggaagttg agttcagcgt
     1261 ctttgagcga tgactggtcc ttgtataagg tagcttcagc ctggctgagc tggacctggt
     1321 aaggacgagg atcaatcacg gcgagtagct cgccctcttt tacctcctgg ccttcacgga
     1381 aatggatttc gacgagctgg ccatcaatgc gcgattttac gacgacggtg ttgaaggcct
     1441 cgaccgagcc gagtccattc aggtagatgg gcaggtcgcg catttctgct ttggcaactg
     1501 cgaccggaat cgtcatgttg aagccgccgc gaccctggcc ttttttatta tcgcctttgc
     1561 tggcggcctg tgggttgggc gaagaggaac atccggcgag cagcgcgcag aggagcgcgg
     1621 cgaggctcaa acggcacaga tgtcccttaa attggggcag cagattcatc catttcctct
     1681 caggaacggg caggtgtgga gacgtattac tgtaacagag ctgccgctct tcagcaccca
     1741 ctagccccca ctgaaactca ggccttccgg gcggctcctg cacttactac ttcagtttga
     1801 cggttgcgca aaggtttgtg gcgtctgttt ttgtaaataa ttgttaaaaa gggagttgca
     1861 ggtttttgca gagatgcgaa agcggccgtg ttgggcggag agcttgtgat attaagcgaa
     1921 aacagcgcag gcttgcggcc tgcgctgctg ggatgtgtct agcgtgctga actactgctt
     1981 gggctgatct gatttgggct gctcgggagg agcaggtgct ccggcgggaa cggtccagat
     2041 ctccacgcgg cgtccggtgc cgccggattt cacggccact cgctgcgggt caatgccctt
     2101 ggattgagtc aggtacgttt ttgagttttc ggcgcgctgg ttggcaagac gcggcggctc
     2161 cagctcttca gtcgagcctg atagcgagac gttggtgttg gggtcctgct gcagcttcaa
     2221 agccacgtca tccagaatgg ctttggagcg attgtcaaca taggcgctgt tgggcttgaa
     2281 gtcgaggtcg ctgagcttct gggccgtggg cgccggagca gcaccggctt caacattcac
     2341 cgtggtgatg gcggcggcgc tgagttggcg atcgtcaaac gctgtggcgc ggaccgtgac
     2401 cggaccgggc tgcgtgtcag tggtgtcgag cgtagcctga ttgcggttgg aagagagctt
     2461 gccgccgttg gcgacaaagg caatgctgat ggggcgattg tccgcgctgg tggcgtcgca
     2521 ggtgatcatg gagttttcac ccacgcgtac cgtggcaggc gaagccgtgc aggtgatccg
     2581 cggcggctgc gcattcgcgg aggcagccgg ctcggcggca actgcggcgg taggctgggt
     2641 ggcggagacc ggcagcaccg gcttcagttc cggcgcggcc tccacatcca taacttcaac
     2701 tacatctccg acctttatct cctctaaggc cgttaaaatc atagcagtag ccgacttacg
     2761 atgcgtggac agcacgatca tgtctccgag cgtgcgccgt ggcaagctgg caacgtcatt
     2821 aaacttcgcg ggatccttct gcgtgtcctc gagcgcgctg gcatagagcg acagcttatc
     2881 cacctggtcg tgataagtgg agttgtatgt ccgcgtggcg cgcaggtagt cgcccggctt
     2941 cagcccctta tccgcaccga tgctcaaata caccttgttc ttcgtcccca ggtaggcgtc
     3001 gaattcattc gccatgatga tccgcccctg cggcttgccg ttgggcgggg caaagcggtc
     3061 caggctcacg gcgcggaact tcggcgcttc gcgctcagca aacgggacag ccaaatcccc
     3121 aggcacaaaa tcagcgcagc tcagctccgg tatggcgaca gccgtattct tctggacatc
     3181 gataatccgc acatagccca gctcaaaata gggcgtgccc gcgtcattga tggcccagcg
     3241 ctggccgctg aacatgctgt aggcgttcgg atcgcgcacg cggcgcacaa tctggtaccg
     3301 gtcgccttcc ttgaagtcct tgccatgcag atagacgtaa tccgccgttc cggcaaagcg
     3361 cgtctggtcg ggggtattcc atccgcccgc cacaaaatgc gaatccggca ccttctccga
     3421 gctgatgaag cctgcgcaat acatgtccgc cggcgtcggc gtgttgccga tgttcaaatt
     3481 ctgcgcacgc atcttctgta tctgctgcgg cgctgcactc tgcggcatcg ttccgccctg
     3541 ctgtgcccat gccgcgcccg ccagcgccag cactaccaga aatcgtttca taattgacca
     3601 agcctccccg acacgccatg gtttgcaaca aaggtcgcga aaaacggttg cgcaaagtcg
     3661 tccgcgcaaa ccgcgcctgt tggccacggc gcaaacggta ttctcccgag ggtggaacat
     3721 atcaccaata atttcgagag tacaactaaa cctttgttaa ctaaggaaat acacctgatt
     3781 acagaagtac aatttagggc ttgcattcgg gtcttgcatc tgtgattgtt cgcccgtaag
     3841 atgtcgaatt tcattcacct gcatggttgg taaccccaat tacgggcccc gattcctgcc
     3901 cgcccggctg ccacgcctct gtgtcgcaat tgcctcaacc aaccctgccg agctggtcca
     3961 gaaggccgac gtcgccgtca gggaaaaccc ctttgttgag ttcaggttag actaccttcc
     4021 gaagccagcg ctgggcctgc ccaagctcaa gacctttgtc gagtaccacc cggaggccct
     4081 gatcgtggcc acctgccggc gggtcgccgc cgggggtcga tttcggggct ccatcgccgc
     4141 tgaagtccag cttctggcca aggccgccca gcagggatgc caccttattg atatcgagct
     4201 cgaaaccgcc gagcgcctca agcccgccga ctttgagaag ctccgccgct ccgccaacct
     4261 gatcatctct taccacgact acaaagccac caaaaagctg gacgacatcc tggcgcgcat
     4321 gcgcaagtac ccggcagact tcttcaaaat cgtcaccacc gccaactcgc tctatgacaa
     4381 cgtggtgatg atgaaatttc tggaaaagca cagccacgag ttccaactga ttggcgcctg
     4441 catgggcgag cagggcgtca tcagccgggt gctcggcgtc cgcgcgggca gccagttcac
     4501 cttcgcggcc gtaaatcccg gggaagagac cgctcccggc cagctcaccg cccgcaccct
     4561 tcgtgagacg ttccgaattg accaggttga cgtagccacc cgcgtttatg gcgtggtggg
     4621 cgacccggtg gcccactcac tctcgccggc catgctcaac gcggcatttc ggcgcgaaaa
     4681 cgcgaacggc gtctatctgg cgctgcacgc caagtcgctc gacgatctga tggcctgcgt
     4741 gcgcgatatc cctatcgccg gcctcagcgt gaccatgccc tataaagagg agatcgtcaa
     4801 acatctcgac aagactgacc ctcttaccac gaaaatcggc gcctgcaata ccgtggtccg
     4861 cagccaggaa ggaaagcttt acggcttcaa tactgacgtg ggcggcatcg tgcgtcctct
     4921 cgagacgcgc atccgccttg ggggagcaaa aattctggtg cttggcgccg gaggctccgc
     4981 tcgcgcagcc gtcttcggac tgaaagagcg cggggcagag gtctacatcc tcaaccgcac
     5041 cgccggtcca gcccagaccc tggccaagca ggccaaagcc aaggccataa accgcaccat
     5101 gctgaaaaag atggagtttg acgtgatcat caacgc
//
LOCUS       DASQYP010000122         2892 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_220104, whole genome shotgun sequence.
ACCESSION   DASQYP010000122 DASQYP010000000
VERSION     DASQYP010000122.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 2892)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2892)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2892
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_220104"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            388..2559
                     /locus_tag="VE783_03905"
     CDS             388..2559
                     /locus_tag="VE783_03905"
                     /inference="COORDINATES: protein motif:HMM:NF016289.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M28 family metallopeptidase"
                     /protein_id="HYX52569.1"
                     /translation="MQLRPRIFLLISIFVLTAFAQQASDSQSQSQSQSQTPQVFGFRD
                     FSKQFEIDQKFLKVPDTKLAEQHLKILTAVPHVAGSNEDLNTAQYVAKQFQVAGLETE
                     IVPYKVWMNRPEEISVTVTAPAGVKMNGPTREHVEGDPFQDDRRVLMPFNGSSPSGDV
                     EAEVVYANYGSPEDFKKLADMKIDVKGKIVLVRYGQNFRGVKSFVAEEHGASGVIIYS
                     DPIDDGYFRGDMYPKGPWRPATGVQRGSIQYMFKYPGDPTTPGFASLPDMPDSKRVPP
                     EQAPDMPKIPTTPISYADAQPILQNLSGPESPREWQGALPFTYHVGPGPVKVKIHLKQ
                     SYRYFTIWNVIGKIQGTKYPDEWVVLGNHRDAWVYGAVDPNSGTAAMLESVHGMADLL
                     HGNWKPDRTIVFCSWDAEEEGLIGSTEWGEQFEQQLAHAVAYFNMDVAVSGPNFNASA
                     VPSLKGFVREVTKFVQSPKGGTVYEQWKEERSKQSERRSPDFNSGRRANARVENDVPV
                     GDLGSGSDYSVFIQHLGIPSADATSNGPYGVYHSVFDNFAWFKKFGDPTFVYEQQMAR
                     VLGLEALHMSAADVLPYDYELYGKEITAYIEQAQEKAKQNFGGSAPDFSKALDAAKSF
                     TSAGAAVLALQKNPPADASKLNQTLIAAERALLLAKGLPNRPWFRHSIYAPGQYTGYA
                     AVVIPGVNEAIDAKNAALTGEQIQALADALNRAADTLEKAR"
BASE COUNT          632 a          786 c          943 g          531 t
ORIGIN      
        1 ttggcgacgt gggatgagaa agcttaaacc gaaacagaag attaaacctc cggagctcaa
       61 tggagagtaa cccggcacag gcgagggcgc ctgtgctaca aagcctgcta tcgatcgact
      121 aatttttgag acagcttcta gcaattagca gttagccaaa cagaggagtg ggcagaattt
      181 tcgccaactt ccaagcgcag caggttcatg aaccgcaaag tccctcaccc ctattcggct
      241 gctgatgaaa gcgcagcctc attgcggggt tcgggatgac gagggacggg aaggtggcac
      301 acggtgaaag acgccgctca ggcaattttc cctggtgtag tgtaatcttt ctggtttgcc
      361 cgcagccccc aaggaggcct tcgtttcatg cagctccgcc cccggatctt cttactgatc
      421 tcaatcttcg tgctcaccgc gtttgcgcag caggccagcg acagccaaag ccagagtcag
      481 agccagagcc agacgccgca ggtatttggc ttccgcgact tctccaaaca atttgagatc
      541 gatcaaaaat tcctgaaggt gccggacacg aagctggccg agcagcattt gaaaatactg
      601 actgcggtgc cgcacgtggc gggatcgaat gaggacctga acactgcgca atatgtggcc
      661 aagcagttcc aggtggccgg gctggagacg gagattgtgc cgtataaagt ctggatgaac
      721 cgtccggagg agatcagcgt gacggtgacg gcgccggccg gcgtgaagat gaacgggccc
      781 acgcgcgagc acgtggaagg cgatccgttc caggacgacc gtcgggtgct gatgccgttc
      841 aatggttcgt caccttcggg agacgttgag gccgaggtgg tctacgccaa ttacggttcg
      901 ccggaagatt tcaagaagct ggcggacatg aagatcgacg tgaaaggcaa gatcgtgctg
      961 gtgcgctacg ggcagaattt ccgcggagtg aagagctttg tggcggaaga gcatggcgcc
     1021 tccggcgtga tcatttattc tgacccgatc gacgacggct acttccgtgg cgacatgtat
     1081 ccaaaggggc cgtggcgtcc ggcgaccggg gtgcagcgcg gctccatcca atacatgttc
     1141 aagtatcccg gtgaccccac cacgccgggc ttcgccagcc tgccggacat gccggattca
     1201 aagcgcgtcc cgccggagca ggcgccggac atgccgaaga tcccaaccac gccgatctcc
     1261 tatgctgacg cgcagccgat cctgcaaaac ctgagcgggc cggagtcgcc gcgtgagtgg
     1321 cagggcgcgc tgcccttcac ctatcacgtg ggtccggggc cggtgaaggt gaagattcat
     1381 ctgaagcagt cgtaccgtta cttcaccatc tggaatgtga tcgggaaaat ccagggcacc
     1441 aagtatccgg atgagtgggt ggtgctgggc aatcatcgcg atgcgtgggt gtatggcgcg
     1501 gtggacccaa acagcggcac ggcagcgatg ctggagtccg tacatggaat ggccgacctg
     1561 ctgcacggca actggaagcc ggaccggaca attgttttct gcagctggga cgcggaagag
     1621 gaagggctga tcggctcgac ggagtggggc gagcagtttg agcagcagct ggcgcatgcc
     1681 gtggcgtact tcaacatgga cgtggcggtg agcgggccga actttaacgc ttcagccgtg
     1741 ccgagcctga agggctttgt gcgtgaggta accaagtttg tgcagagccc aaagggcggc
     1801 acggtttacg agcagtggaa ggaagagcgg agcaaacaaa gcgagaggcg cagccctgac
     1861 ttcaattccg gccgtcgggc caatgcgcga gtggagaatg acgtgccggt gggcgacctg
     1921 ggcagcgggt ccgattacag cgtcttcatc cagcacctgg ggattccgtc ggcggacgca
     1981 acctccaacg gtccttatgg ggtgtaccac tccgtgttcg acaattttgc ctggttcaag
     2041 aagttcggcg atccgacttt tgtttatgag cagcagatgg cgcgggtgct ggggctggag
     2101 gcgctgcaca tgtccgccgc agacgtgctg ccctatgact acgagctcta cggcaaggag
     2161 atcaccgcct acattgagca ggcgcaggaa aaggccaaac agaactttgg cggcagcgcg
     2221 cctgatttca gcaaggcgct ggatgcggcg aaaagcttta cctcagccgg cgccgcggta
     2281 ctggccctgc agaagaaccc accggcggat gcaagcaagc tgaaccagac cctgattgcg
     2341 gccgagcgtg cgctgctgct ggcaaaaggg ctgccgaacc gtccctggtt ccggcactcg
     2401 atttacgctc cggggcaata caccgggtat gcggcggtgg tgatcccggg cgtgaatgag
     2461 gcgattgatg ccaaaaacgc tgcgctcacg ggtgagcaga tccaggcgct ggcggacgcg
     2521 ctgaatcgcg ccgcggacac gctggagaaa gcgcggtagg atcgccgtaa tcgccgtaat
     2581 cgcgcagaaa gggcctttgg ccattagccc ttggcccttg gcctttggcc tttggctttg
     2641 cacatcgagt cggtgggcgc tggagttttg acaggccgag cagggccgcc gggctcccgt
     2701 cccaacgaaa aggtcgcgcg aacccggacg aaaaatattt ttacggaagc acgtccccaa
     2761 attccgaaaa atcggtatat agacatatag gggcgtcgca tcgggtgatc gggtgatcgg
     2821 gtgatccggt gatcggcaga accaagctga gggcaaggac gcgaacgagc gactagcttc
     2881 cagctggagg ct
//
LOCUS       DASQYP010000123         5826 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_279660, whole genome shotgun sequence.
ACCESSION   DASQYP010000123 DASQYP010000000
VERSION     DASQYP010000123.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 5826)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5826)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5826
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_279660"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..390
                     /locus_tag="VE783_03910"
     CDS             <1..390
                     /locus_tag="VE783_03910"
                     /inference="COORDINATES: protein motif:HMM:NF013866.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dienelactone hydrolase family protein"
                     /protein_id="HYX52570.1"
                     /translation="DYGKKLPAANGKLAVTGFCWGGGQSFRLATNRKDLEAAYVFYGP
                     PPKEFNTITAPVYGFYAGNDARIDATIPDAQKGMKDSGKKYDPVTYEGAGHGFMRAGE
                     DPGNTNADNKKAHDQAWERWLGLLKQL"
     gene            544..1401
                     /locus_tag="VE783_03915"
     CDS             544..1401
                     /locus_tag="VE783_03915"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52571.1"
                     /translation="MRLLIRGIVLGIWLLAIPAAANAQSGSNEAQQDRFQRTFTTSPG
                     ATVSIENYKGTIHVTATDSNQVTVDVHKIFDGSSSDRKWWMENLKINFTNSPDRVRVK
                     VEYPTMTCMFCWQNWESAVELEVKVPRQVNVDLDGYKPDIKVSGIHGDLFVKSYKAPM
                     LIEGTTGSIRIDTYKDTLRLRDVSITHDLSVKSYKADLEIDARSLGQSARLENYKGDI
                     ILQVPAGAGFDLDFDGGRHSSFHSDFPLNSNTGYSGTRVRATINKGGSHLDLHTERGT
                     VELRKGRVN"
     gene            1611..2072
                     /locus_tag="VE783_03920"
     CDS             1611..2072
                     /locus_tag="VE783_03920"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52572.1"
                     /translation="MQIINNGFGLIGIVGSHISANGPVLIQGNTTDGVRLRNASGELG
                     PANDGAAGPVIQQNGTSATNITLGNCCALPAGVSVTNNSDLDISAGIVANNSAPGLVV
                     QDNSSVRVIGAGSLFHHAEPGRHLRDECLHGSAVSGAELNGEREFRSAMRP"
     gene            complement(2241..4745)
                     /locus_tag="VE783_03925"
     CDS             complement(2241..4745)
                     /locus_tag="VE783_03925"
                     /inference="COORDINATES: protein motif:HMM:NF024907.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FG-GAP-like repeat-containing protein"
                     /protein_id="HYX52573.1"
                     /translation="MPRTSALLFFLLIGCSFLALAQSGQPSIAAVGDLNGDGKLDVVV
                     ANGSLNNVGVFLNDGSGGLTAGKFFAVAHPANSVQLADFNSDGHLDILVIEQVPAGTS
                     PLEVMLGDGTGNFAAPVAVPLTSATLSAAVVADFNGDGKADIAFASITSNSSAAVGVM
                     LGDGKGAFSAPVFSPIAYDGTFVINLTVVDSNKDGKPDLVVDTASNNPIRQDSFLSIN
                     DGTGAFLSMELARGNFEGNLTTAGDFNGDGNLDFLAGGEFLFGDGQGGILFSSSNLLT
                     ISTGTAVDLDHNGKTDLAVNGFSYRPGNGSGGFGDVINFATPPAGVGPRLIAVGDFNG
                     DGVPDLVLLNSATNEVSVFLNNVAAPASIAASTLSTFVVSASTTSVGGPVTLVTQVIA
                     PNGGGIPTGTVTFKEGATTLGSAPVNIYGNAALPTTFATGGLHSNLTGSFTGTLDPAT
                     NTLFGNSDTGSIQASISVNNTAPSAPAPTVTLSLARNPVFVLHTVIVSSSVTSTSGTP
                     TGNVTYLADGDVIGVEPVGTALLARFPTAGLHNIQAVYGGDGTFPLATSATAVEDVRA
                     FNTPRAPSTTQVTATPGPNGGGLNLNSQVSGGAIQPTGTILYRANGGFVAFQPPGQQV
                     FFNAAPGTYQISATYQGDAALAPSSASVIAVVGGGGGGGDFSLSSSPQSATVKVGQSA
                     TFTITLSPQAGFASATNFACSGLPAGSACSFAPATLMPIGFPVSTTLTLTTTAAAATI
                     LLPNSLRTPGAPPTSSFSTVLLLLMLTITSWTLRKTHKRVRLPLTAALLLLSGCGGGA
                     GTATHTGGTPQGTFQVTVTATSTSSHTLPLSITVTP"
     gene            5249..>5826
                     /locus_tag="VE783_03930"
     CDS             5249..>5826
                     /locus_tag="VE783_03930"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52574.1"
                     /translation="MKPMIAWQDDYRDRMNPELVTKLLRASVPVLEFTQWSTLETRPG
                     YAKTVLPISFRSSNQHGVHQAALIGLSADYTAGTALSTIIRGTPVVGVHPQKDDEGAS
                     LWSVSLAVNYKSPSSANLMAITEIEPEKQARIARRYYQSNTVLERVQVSLRNGQQEVA
                     TAELTFFMRKSNMIRPSSSGARLHPLFEHKLKA"
BASE COUNT         1400 a         1556 c         1701 g         1169 t
ORIGIN      
        1 gactacggca agaagctgcc ggccgcgaac ggaaagcttg cagttacagg gttttgctgg
       61 ggcggagggc agtcattccg cttagccacc aatcgcaaag acctggaggc tgcgtatgtg
      121 ttctacggtc cgccgccgaa ggaattcaac accatcactg ctccggtgta cggcttttat
      181 gccgggaacg atgcacgcat tgacgcgacc attcccgacg cgcaaaaagg gatgaaagac
      241 tccggcaaaa aatatgatcc ggtgacttat gagggcgccg gccacggctt catgcgcgca
      301 ggagaggacc cgggcaacac aaatgctgac aacaaaaagg cccatgatca ggcttgggag
      361 cgctggctgg gtcttttgaa acagctctaa tctatctaag gcagtgttta aggggcggcc
      421 tcctcgaccg cccctgtttt caatcagata acgtcacgag gagctgatcg tctaatggaa
      481 ccggggagtg ggctcctgcg tattgatacc cagacggcca aaagcccgct ctctggagga
      541 accatgcgtc tccttatccg cggcatcgtt ttaggaatct ggctgctggc gatccccgcg
      601 gcagccaatg cacagtccgg cagcaacgaa gcccaacaag accgatttca gcgcaccttc
      661 acaacctctc ccggcgccac ggtttcgatt gaaaactaca aaggcacaat tcacgtaact
      721 gccacggatt cgaaccaggt tacggtcgac gtgcataaga tttttgacgg cagcagctca
      781 gaccgcaaat ggtggatgga aaacctgaag atcaacttca ccaactctcc tgatcgcgtt
      841 cgggtgaagg tggagtatcc cacaatgacg tgcatgttct gctggcagaa ctgggagtct
      901 gcggtagagc tggaagtgaa agttccccgg caggtgaatg tggatctgga tggctacaag
      961 ccggacatca aagtttccgg catccatggg gatcttttcg tgaaaagtta caaagcaccc
     1021 atgctgatcg aagggaccac cgggtccatc cgcatagata cttacaaaga cacactgcgg
     1081 ctgcgcgacg tcagcatcac gcatgatctc tctgttaagt catacaaggc ggatctggag
     1141 attgacgcgc ggtcgttggg ccagtcagcg cgactggaga actacaaagg cgacatcata
     1201 ttgcaggttc cggccggcgc aggcttcgat ctcgatttcg atggcggccg gcactccagc
     1261 tttcacagcg acttcccgct gaattcaaac accggatatt ccggaaccag agtgcgggcc
     1321 accatcaaca aaggcggaag tcacctggat ttgcataccg aaagagggac agtggaactc
     1381 agaaaaggtc gagtgaatta gtttgaagca caggtaagaa gattgcgcgt acccacgagg
     1441 tacgcgcttt tcacgtcagg agaacatacg gatgcgcaat cttaagcttg tgcttgtcct
     1501 gctgatggga agcacagcgt tatatcctgc aaaataatgg gcaaggcggc atcttcgttt
     1561 cgcagggggc gaatgccaaa gttggagcac tgcaaaacgc gactaccgca gtgcagatca
     1621 tcaacaacgg ctttggcctg attggaattg tgggcagcca catcagcgcg aacggtccgg
     1681 tgctgatcca gggtaatacg acggatggag tgcggctgcg caatgcatcg ggggagcttg
     1741 gcccggcaaa tgacggggct gccggccccg tgatccagca gaacgggacc tctgcgacca
     1801 acatcacgct cgggaactgc tgcgccctgc cggcgggcgt cagcgtaacc aacaattctg
     1861 acctggatat ttcagcgggt atagttgcca acaactccgc gccgggactt gtggtacagg
     1921 acaactccag cgtgcgtgtg atcggtgcgg gatcgctttt ccatcacgca gaacccggtc
     1981 ggcatctccg tgacgaatgt ctccacggca gcgctgtttc tggcgccgag cttaacgggg
     2041 aacgtgaatt ccgatctgca atgcggccct gattccgtgg ggtatggcga tctgacaaat
     2101 gtaggaaaga acggctgtgc acaattcaag agtgtgcaat cgccgggcaa ggcacccaaa
     2161 cggctcagca aaccgcttcc gtaacaaagt gagcgcatgc cccggcccgg ccgcaaaagc
     2221 cggggcactt ttagatttgt ttatggcgtt acggtaatgc tgagaggcag cgtgtgcgag
     2281 cttgtagatg tagccgtcac cgtgacctgg aacgtaccct gcggagtacc gccggtatga
     2341 gtcgccgttc cagctccacc accgcaacct gaaagcagca acaaggctgc ggtcagcggc
     2401 agacgcacgc gtttgtgggt ctttctcaag gtccacgaag ttattgtcag catcagcaga
     2461 agtagcacgg ttgaaaagga ggaggttggc ggggcgcccg gtgtccgcaa cgagttgggc
     2521 aaaaggattg tggcagctgc agccgtggtg gttaaagtaa gagttgtgga cacagggaaa
     2581 ccgatcggca taagcgtggc aggtgcgaag ctacaagcag aaccggcagg aagaccgcta
     2641 caggcaaaat tggtcgccga ggcgaagcct gcctgaggac tcaaagtgat agtgaaggtt
     2701 gctgactgac caactttcac agtggctgat tgaggcgagc tgctcagaga gaagtcccct
     2761 cctcctccac cgcctccaac caccgcgatt acgctggcgc tgctgggggc cagcgctgca
     2821 tctccctgat aggtggctga tatctgataa gttcccggag cggcattaaa aaaaacctgt
     2881 tggccgggcg gttgaaaagc aacgaatccg ccattggcac gatacaggat ggtcccggtg
     2941 ggctgaatag ctccaccact tacctgcgag tttaagttaa gcccgccgcc attggggcct
     3001 ggagtcgccg tcacctgcgt agtactcggg gcacgaggag tgttgaaggc acgaacgtcc
     3061 tccactgcgg tggcggaggt cgccaaagga aaggtgccat cgccaccata caccgcctgg
     3121 atgttgtgca gccctgctgt ggggaaacgg gcaagcaatg ccgttccaac aggctcgact
     3181 ccaatgacat cgccgtccgc caggtacgtg acattgccgg tgggcgtgcc tgaggtactg
     3241 gtcacgctag agctaacaat aaccgtgtgc aatacgaaga cggggtttcg tgcaagagag
     3301 agcgttaccg tgggagcggg tgcggagggc gccgtgttgt tcacggagat actagcttga
     3361 atggaaccgg tgtcactatt gccgaacaga gtgttggtag caggatccaa tgttccggtg
     3421 aagcttccgg ttagattgct gtgcaagccg cctgtagcaa atgtagttgg aagcgcagcg
     3481 ttaccgtaaa tgtttacggg agcgcttccc agcgttgttg caccttcctt gaaggtaacc
     3541 gtgccggtgg ggatgccacc cccattcggc gcaatcacct gcgtgacaag tgtcactggt
     3601 ccccccacgc tggttgtgga ggcggaaacc acgaatgtgg agagcgttga agccgcgatg
     3661 ctggctggtg cagccacatt gttgagaaaa acggaaactt cattggttgc gctgttcagg
     3721 agcaccagat cggggacgcc gtcgccgttg aagtcgccca ctgcgatcaa cctgggacca
     3781 accccggctg gtggcgtggc gaaattgatc acgtcaccga agccgccgct gccgttccct
     3841 gggcgatagg aaaacccgtt gaccgccaag tccgttttgc cattgtgatc gagatcgact
     3901 gcggtaccgg tgctgatagt aagaagattg ctggatgaaa ataggattcc gccctgccca
     3961 tcgccaaaca agaattcgcc gccggcaagg aagtcgaggt tgccgtctcc gttgaagtcg
     4021 ccggcggtcg taagattgcc ttcaaaattg ccacgggcta gttccatgga caaaaatgcg
     4081 cccgtgccat cattgatgga aagaaacgaa tcctgtcgaa tggggttgtt ggatgctgta
     4141 tccactacga ggtctggctt gccatcttta ttagagtcca caacggtgag gttgatgaca
     4201 aaggttccat cataggcaat cgggctgaag acaggagcgg aaaatgctcc tttgccgtcg
     4261 cctagcatca ctcccactgc cgcactagaa ttcgacgtga ttgaggcgaa ggcgatatca
     4321 gcttttccat cgccattgaa gtctgccact acggccgccg acaaggtagc ggaggtaagt
     4381 ggaaccgcga ctggagcagc aaagttacct gtgccatcgc cgagcataac ctccagcggc
     4441 gatgttccgg caggtacttg ctcgataacc agaatgtcaa gatgcccgtc agagttgaag
     4501 tcggccagtt gtacagaatt ggcgggatgg gcaacggcaa aaaacttgcc tgcggttaaa
     4561 cctccgctgc catcgttgag aaacactccc acattgttca ggctgccatt ggcgaccaca
     4621 acatctagtt tgccgtcacc gttcaggtcc ccgacggcgg caattgatgg ttgacctgat
     4681 tgggcaagtg caagaaagga acatccaata agcaagaaaa aaagaagggc cgaagtacgg
     4741 ggcatagttc acctgttctg gttgagcgcg aaccatagta accagatatt cagcatctct
     4801 gcaatttctt atattagcat cactagttat cacctcccgt gggacggcgc ccgccagctt
     4861 cgagttcgac atgtcctgaa tgctggtgaa agtatcttga gagggccctc aatgatcccg
     4921 atgagagctc cgaagggaat ttcctgagac taccgttctt aacattgaca acgggaagca
     4981 ggatcgaatc aacactccac tcaaaaccgc tcacgttgat ttccctgcga cgcttcccaa
     5041 ccaggtatag cacgccgttc tgacaactct gtattgaagc agtccagttg gtttttcgcc
     5101 tttaacgcat ttagcgcggg tgcggaggtg tgttccaaag gcgatcaggc aagccgcgga
     5161 ggcggctgca tgtgcacccg tctgccccgg cgcagacgca cagaaaaaac gcgcgtgttc
     5221 ggcgtagcgc gaaacaggag aaggacaaat gaaacctatg attgcctggc aagacgacta
     5281 tcgtgacagg atgaaccctg agctggtgac gaagctgctc cgagccagcg taccggtatt
     5341 ggaattcacg caatggagca cgctggagac gcgtcccggc tacgccaaga ccgtgctccc
     5401 tatttctttt cgctcgagca accagcatgg cgtgcatcag gcggcgctca tcggcctcag
     5461 tgccgactat acggccggta cggcgctctc cactatcatt cgcggaacgc cggtggtggg
     5521 cgtgcatccg cagaaagatg atgaaggggc ttcgctatgg tcggtttcgc tggcggtgaa
     5581 ttacaaatct cccagctcgg ccaatctgat ggcgatcacg gagattgagc cggaaaagca
     5641 ggcgcgcatc gcacgacgct actaccagag caacacggtg ctggaacgcg tacaggtctc
     5701 gctgcgcaat ggccagcagg aagtggcaac tgccgaacta actttcttca tgaggaaatc
     5761 aaacatgatc cgaccaagtt cttccggagc aagactgcat ccgctgttcg aacacaaact
     5821 gaaagc
//
LOCUS       DASQYP010000124         4137 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_71746, whole genome shotgun sequence.
ACCESSION   DASQYP010000124 DASQYP010000000
VERSION     DASQYP010000124.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 4137)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4137)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4137
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_71746"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..722
                     /locus_tag="VE783_03935"
     CDS             <1..722
                     /locus_tag="VE783_03935"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52575.1"
                     /translation="AQALQFLFQYRPDFLMRRFVQPALVLLICAICQAQVVDRMVAVI
                     NKRVLLQSELDQAVRVESLLQGKPLSAITAKDKSAILDQLIDRSLLEQQIVHGEMLAP
                     SADELTAQLKEIRSQLPGAENDNGWSALLNTYGLSQEDVEDHLSSQSRVLRFVDLRFR
                     GMVRVDKEAIQGYYDQKLVPELRRQGAQVPAVNDVSAQIEKVLQEQGISDMLTRWLET
                     LRSQAHIEKMRPALAAGGTTP"
     gene            719..>4137
                     /locus_tag="VE783_03940"
     CDS             719..>4137
                     /locus_tag="VE783_03940"
                     /inference="COORDINATES: protein motif:HMM:NF016260.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translocation/assembly module TamB
                     domain-containing protein"
                     /protein_id="HYX52576.1"
                     /translation="MSTLVAAPPKKKRRLRRWTLIAAGVLLLVFGALLIYMSSDGFRE
                     SVRQRLVAEIQRATGGKVELQSFTWTLSSLEFEVRGLTVHGLEAPGQAPYAHADRIVV
                     NVKILSFLTRKISLSNVAVDRLAVHLIVYPNGSTNQPSPQSAKDGAGTPTERFFDLEI
                     KRLQISSGTLILNEQQIPFAFTAERVAAGMTYSPKEQGYETGISMSLLSARWREYAPE
                     RAEIDATLLLRHADADIKSLKITSQRSSLIANGTLRNYNNPQLVFQYSASMELPEIAK
                     LARLPQLKAGHADLKGNLSYQGSSYSAQGNLSTVRLDWKEHDWQLTDAEIKTAYSINP
                     EKIQLSHITARLLGGSAQGDLQVSNWASPEPGKKPARKQQGTANFQISRLGLTEIASA
                     LVNPGLPLRKFQAVGNATGSIKGNWTGSPQNAVAGISLDVDPPAAVTPHEIPVTAQLR
                     ATYHGDTSIIDVAALNLATRAIRVNATGRLGSESAQAKLSVNSTDLHELRPVLAAMSP
                     GTRIPVLLEGRASFNGSLSGRLSAITTRGRLELENFDSELAPLEIAVPPSSHGAGGAQ
                     RIHWDSLIADLVYSPSTISMQNGVLRRGKAQMNFSVSASLRNWVFDDRSSQVNLSLRV
                     QDTNVEEVQALAGLKYPLTGIITADVRASGTPQDLRGNGNLQLNKLTAYGEPFNSFHS
                     QFQFAGKQFQFNNLVLTHNSAQLTGNYGYNFAAGNFQFDLTGSNIDLASMHIFESARL
                     TVEGKGAFHLLGSGTAAAPAVTGRLDLRDVVLNHELVGNMTVTGETTGSDLVLQGRSN
                     FKDASLNVDGKIQLRGDWPGQMTLRFAQLDFDPLIRAYFSGEITGHSAIAGTIDIHGP
                     FRRPRDLVISGTADQLTAELQNIRLVNDGPVHFSMDSEFARLDQFHMIGENTDMFVQG
                     GVQVAAAHDLDLRTRGRLDLKLLQGYNHDILAYGPANFTIDIRGDIAHPQLSGRFDLV
                     DASISLADLPNGLSHINGNFNFVQNRVQIEKLTAQSGGGTLNVGGFLAWRNGIYFDLT
                     ATSSDVRLRYPPGVSASANANLRYTGSAKSSQLSGDVLVTRLGVNPRFDFANYLAQSR
                     TAPGVATLNPFLDNLRLDVHVTSTPELRVETSLAKVSGDVDLRIRGTAARPA"
BASE COUNT          859 a         1260 c         1175 g          843 t
ORIGIN      
        1 gtgctcaggc acttcaattt ctttttcaat atcggccaga ctttctgatg cgtcgctttg
       61 tccaacccgc gctggtcctg cttatctgtg ccatttgtca ggcgcaagtg gtggaccgca
      121 tggtggccgt cataaacaag cgcgttctgc tgcaaagcga actggatcag gcggtgcggg
      181 tagagtctct gctgcaaggc aaaccgctct cggccatcac agccaaggac aaatccgcga
      241 tccttgatca gttaattgac cggtcgctgc tcgagcagca aattgtgcat ggcgagatgc
      301 ttgctccctc cgccgatgaa ctaactgcgc agctgaaaga gatccgttcg cagctccccg
      361 gcgcagagaa tgacaatggc tggagcgcgc tgctcaacac ctacggactc tcgcaagagg
      421 acgtggaaga ccacctgagc tcccaatcgc gcgtgctgcg ctttgtggac ctccgcttcc
      481 gcggcatggt gcgcgtggat aaagaggcca ttcagggcta ctacgaccag aaactcgttc
      541 ccgaactgcg ccggcagggc gcgcaggtgc ccgccgtgaa tgacgtatct gcccagatcg
      601 aaaaggtcct tcaggagcag ggcattagtg acatgctcac ccgctggctg gaaaccctgc
      661 gctcgcaggc gcacatagag aagatgcggc cagcgctggc cgccggcgga accaccccat
      721 gagcaccctg gtagccgcgc cgccgaaaaa gaagaggcgc ttgcgtaggt ggaccctcat
      781 tgcggcaggc gtgcttctgc tggtattcgg ggcgttactg atttacatga gcagtgacgg
      841 gtttcgcgaa tccgtccgcc agcggctggt cgcggaaatc cagcgcgcca ctggcggcaa
      901 agtggagttg cagtcgttta cgtggacgct ctcttctctg gagtttgaag ttcgggggct
      961 gaccgtgcac ggcctggaag ctcccggcca ggctccttat gctcacgctg accgcatcgt
     1021 cgtcaatgta aagatcctgt catttctcac ccgcaagatt tctctcagca atgtggctgt
     1081 ggatcggctg gcagttcatt tgatcgtcta tccgaacggc tccaccaacc agccgtcacc
     1141 gcagagtgca aaagatggag cgggcactcc cactgagcgc ttttttgatc ttgagatcaa
     1201 gcgccttcag atcagcagcg gcacgctgat cctgaatgag cagcagatcc cattcgcctt
     1261 caccgcggaa cgcgtcgccg ctggcatgac gtattccccc aaagagcagg gatatgagac
     1321 cggaatttcc atgtcattgc tctcagcccg ctggcgcgag tatgcgccgg agcgcgcaga
     1381 aattgacgcc acgctgctgc ttcgccacgc cgacgcggac atcaagtcac tgaaaatcac
     1441 cagccagcgt tccagcctta tcgcgaatgg tacgctgcgc aactacaaca atccgcagct
     1501 tgtgtttcag tactccgcct ccatggagct gccagagatc gcaaaattgg cgcgcctgcc
     1561 ccagctcaaa gccggtcatg ctgatctgaa aggcaatctc agctaccagg gcagcagcta
     1621 ttccgcacag ggtaacctga gcaccgtgcg gcttgactgg aaggaacacg actggcaatt
     1681 gacggacgca gaaatcaaaa ccgcctattc gattaatcct gaaaagatcc agctctcaca
     1741 cattactgcc cgcctgcttg gcggcagcgc tcagggggat ctccaggttt cgaattgggc
     1801 atcgccggaa cctggcaaaa agccggcccg caagcagcag ggcacggcga attttcagat
     1861 ttccaggctc ggtctcacgg agattgcttc tgccttggtc aatccggggc tgccgctgcg
     1921 gaaatttcaa gccgttggga atgccaccgg atcaataaaa ggcaattgga ctggctcgcc
     1981 gcagaacgcg gtggctggga tctcgctcga cgtggatcct ccggctgcgg tgactccgca
     2041 cgaaattcct gtgacggcgc aactccgcgc cacgtatcac ggagatacaa gcatcattga
     2101 cgtcgccgcg ctgaatcttg ccacgcgggc cattcgcgtg aatgcgactg gacggctcgg
     2161 atcagagtcg gcccaggcaa aactctcagt aaattccact gacctccatg agctcaggcc
     2221 ggtactcgcc gccatgagcc ctggaacgcg tattccggtg ctgctggaag ggcgcgcctc
     2281 attcaacggt tcgctttccg gaagacttag tgcgatcacc actcgcggcc ggctggagct
     2341 ggaaaacttc gatagcgaac ttgctccgct ggaaatcgcc gttccaccct catcccacgg
     2401 ggcaggcggg gcacagcgca tacattggga ctcactgata gcggatctgg tttattctcc
     2461 ctccaccatt tcaatgcaga atggagtttt gcgccgcggc aaagcgcaga tgaatttctc
     2521 cgtgagtgcc tctttgcgca actgggtatt cgatgaccgc agcagccagg tcaatctctc
     2581 tctgcgcgtg caggatacaa atgtggagga agtgcaggcg ctggccggac tgaaatatcc
     2641 gctcaccggc atcatcaccg ccgatgttcg cgccagtggc accccgcagg acctgcgcgg
     2701 caacggcaat ctccagctga acaagctcac cgcgtacggc gagcccttca actcctttca
     2761 cagccagttc cagttcgctg gaaagcaatt ccagttcaat aatctggtgc tcacgcataa
     2821 cagcgcgcag ctcaccggga attacggtta caactttgcc gccgggaact tccagtttga
     2881 tctcacgggg agcaacatcg accttgcatc gatgcacatt ttcgaatcag cccggcttac
     2941 ggtggaaggc aagggagcgt ttcatctgct cggctcgggt accgctgcgg cgccggctgt
     3001 caccggccgg ctcgacctgc gtgacgtggt gctgaatcac gaattggtcg gcaacatgac
     3061 cgttaccggc gagaccaccg gaagcgatct ggtgcttcag gggcgctcca atttcaagga
     3121 cgccagcctc aacgtcgacg gcaaaatcca gcttcgcggc gactggccgg gccagatgac
     3181 gctgagattc gcccagctcg acttcgaccc tctcatccgc gcctacttct caggtgaaat
     3241 cactggtcac tcggcgatcg caggcaccat cgacatacat gggccgttcc gccgtccgcg
     3301 tgatctggtc atctccggca cggctgatca actcaccgcg gaattgcaga acatccggct
     3361 ggtgaatgat ggcccggtgc acttctccat ggatagcgaa ttcgcgcgcc tcgatcagtt
     3421 ccacatgatc ggcgaaaaca ctgacatgtt tgtgcaggga ggcgtgcagg tggcggccgc
     3481 gcatgatctc gacctgcgca cccgcggccg tctcgacctg aagttactgc agggctataa
     3541 ccacgacatt ctggcgtatg gtccggccaa cttcaccatt gatattcggg gcgatatcgc
     3601 gcacccgcag cttagtgggc ggtttgatct tgtggacgcc agcatctcgc ttgccgacct
     3661 gcccaacggg ctgagccaca tcaatggcaa ttttaatttt gtgcagaacc gggtgcagat
     3721 tgaaaagctg acggcacaaa gcggtggcgg gaccctgaac gtgggcggct ttctggcgtg
     3781 gcgcaatggt atctactttg atctaaccgc caccagttct gatgtgcggc tgcgctaccc
     3841 gccgggcgtg agtgcttccg ccaatgcgaa cctgcgttac accggatcag ccaaaagctc
     3901 acagctcagc ggcgacgtgc tggtcacgcg cctgggggtg aatccacgct tcgacttcgc
     3961 gaactatctg gcgcaaagca ggactgcgcc gggagtcgcc accctcaacc catttctgga
     4021 taatctgcgg cttgatgtcc atgtgacatc tacgccggag ttgcgggttg agacctcatt
     4081 ggccaaagtc tccggtgacg ttgacctgcg cattcgcggc accgccgctc gtcccgc
//
LOCUS       DASQYP010000125         7520 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_71767, whole genome shotgun sequence.
ACCESSION   DASQYP010000125 DASQYP010000000
VERSION     DASQYP010000125.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 7520)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7520)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7520
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_71767"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..341
                     /locus_tag="VE783_03945"
     CDS             <1..341
                     /locus_tag="VE783_03945"
                     /inference="COORDINATES: protein motif:HMM:NF016143.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="neutral zinc metallopeptidase"
                     /protein_id="HYX52577.1"
                     /translation="HVQKLIGVEGRVRNLQQQDPGAENALSVKMELQADCLAGVWAHS
                     TQQRDLLESGDVDSALGAAAAVGDDRLQKMATGHVSPETFTHGSSAQRTQWFKRGLEQ
                     GTIEGCNTFQ"
     gene            781..1314
                     /locus_tag="VE783_03950"
     CDS             781..1314
                     /locus_tag="VE783_03950"
                     /inference="COORDINATES: protein motif:HMM:NF017015.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DinB family protein"
                     /protein_id="HYX52578.1"
                     /translation="MKAIPSTFLYLLLVLATTTLRAQKPPEGIWQGYDGEWKHVSSQL
                     LALAEATPEEKFSWRPAPGVRSTSEVYMHIAVANFWLLSITGPKAPENLDLKLEKSVT
                     KKAEVIDWLKRSLEAVKNAHEKVTPKDLDRKVHIADRDATVDGMYLRIIVHANEHMGQ
                     LIAYARMTGVVPPWSKE"
     gene            complement(1328..2851)
                     /locus_tag="VE783_03955"
     CDS             complement(1328..2851)
                     /locus_tag="VE783_03955"
                     /inference="COORDINATES: protein motif:HMM:NF018471.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipase maturation factor family protein"
                     /protein_id="HYX52579.1"
                     /translation="MQPLKRKDNVTVSSLMHWYFGDLWLVRLLLQRAFAAIYLIAFIV
                     VLRQFKPLLGKNGLLPVPAFLERATWRDAPSLFHWRYSDRLLTCVGWIGLVLSAAAVA
                     GLTDVLPYWAGLIVWLALWFLYLSIVNVGQKFYGFGWESMLLEAGFFIAFLGPARMQA
                     PAIPMLILRWMLFRTELGAGLIKLRHDPCWRELTCLYYHYETQPIPNPLSWLFHRQPK
                     VMHRFGVIFSHFVQVIVPFGLLAPQPIASIAGGFTMFHQFLLIVSGNYSWLNWLTFAL
                     GFSALNDSVFRWVLPVFTPALLAPPLYVDIILYALAAGTVWLSIKPTANLFSRNQMMN
                     YSYNRYHLVNTYGAFGSVTRERYEVVIESTDAPFITEQTQWREYEFKAKPGDLRRMPA
                     QYAPYHLRLDWMMWFLPFSVTVYTGGLYVPGFELWFLNFIRKLLEDDPATLRLLSKTP
                     FSGKQPTFIRALFYHYRYTDPRQLRETGAWWTRELVGTYLPPISIGDFQRQWRRPSS"
     gene            3147..3353
                     /locus_tag="VE783_03960"
     CDS             3147..3353
                     /locus_tag="VE783_03960"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52580.1"
                     /translation="MNSGLKVSNGEVWAAIAYLDPELEAELLKRRDRIRYMRLKAGIA
                     LVSIGALGMAAILRYLPAVARIFN"
     gene            3499..3714
                     /gene="rpsU"
                     /locus_tag="VE783_03965"
     CDS             3499..3714
                     /gene="rpsU"
                     /locus_tag="VE783_03965"
                     /inference="COORDINATES: protein motif:HMM:TIGR00030.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S21"
                     /protein_id="HYX52581.1"
                     /translation="MAEIRLQEGEPLENALRRFKRKVQAEDIIKEVKRHSYYLKPGEK
                     RRVKQALARKRAKKKMRKDRDPRSDRG"
     gene            3802..4167
                     /locus_tag="VE783_03970"
     CDS             3802..4167
                     /locus_tag="VE783_03970"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52582.1"
                     /translation="MNVLPMRGIKILHVGADPELLWLRTAVLRKHWQVRSVHFQDAER
                     ALQHSLYDLVLICHSVPPESRDEIEHLIAESAFPSAVIILRQDLPEDQVVRTALGLQV
                     SSGPDTLVARIDRVMRKAG"
     gene            4178..5032
                     /locus_tag="VE783_03975"
     CDS             4178..5032
                     /locus_tag="VE783_03975"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012792.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HYX52583.1"
                     /translation="MFCPPSLAARIDRAEGRLCASIAEHFRKQFPEQGSLVLPFAGGM
                     AVYAGPDSPTNKAIGTGFDGPLKEAALVQVEREFSNRRARLQIEVSTLASTSLHTALA
                     ARGYRASGFENVLGHSLRTIGPAVESVIVQPATGNELTAFADVMVEAFASPDEGGVGG
                     DAIPPSDEIRKWVLITMSLPGFRGYLARIGAEITGAASLRFDTGVAQFSGAGTLPKFR
                     RRGVQTALLRERLRDAARSGCDVGVVVTQPASKSQQNAQREGFALLYARQLWVKDFSA
                     HSEPTPSS"
     gene            complement(5051..5467)
                     /locus_tag="VE783_03980"
     CDS             complement(5051..5467)
                     /locus_tag="VE783_03980"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HYX52584.1"
                     /translation="MRIDHVAHPCRDPEATHRFYSGLLGLTLTNAFAASESLMLIYAL
                     PDGGSLVFTAGRTAGEADREVDSEKEHAGLSVATRAELDLWCSRLEANGVKYRWVDNE
                     RIYFSDPNGLVLEIEVASPLRADQNAYQVMKRWLAG"
     gene            complement(5488..5862)
                     /locus_tag="VE783_03985"
     CDS             complement(5488..5862)
                     /locus_tag="VE783_03985"
                     /inference="COORDINATES: protein motif:HMM:NF019459.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1634 domain-containing protein"
                     /protein_id="HYX52585.1"
                     /translation="MKAMDDLRLEGFIGNLLRAGVLMAAAFVLLGGVAYLFQHHAQRV
                     DYKQFRPESADLRAVTSIASAASHLRSEGLIQFGLLLLIATPVARVVLAVAGFYLERD
                     HLYVVVSLIVLGILVFSLLHAT"
     gene            complement(5859..6698)
                     /locus_tag="VE783_03990"
     CDS             complement(5859..6698)
                     /locus_tag="VE783_03990"
                     /inference="COORDINATES: protein motif:HMM:NF014035.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HYX52586.1"
                     /translation="MSALVFTLLVWGASMAAGFLGALTGLGGGVVIVPALTLLLGVDI
                     KYAIGASLVSVIATSSGAAAAYVKEGFSNIRIGMLLEIATTLGAVLGAYLATRVGTHL
                     IAIIFGVVLLQSAYEAVFKARSENSAPIESDALAKRLRLGGDYPLHGRRQEYGVRNVP
                     AGFGLMFGAGTLSGLLGIGSGAVKVIAMDRAMKIPFKVSTTTSNFMIGVTAAASAGVY
                     LGRGYIDPRIAMPVMLGVLAGAFLGTKVLMRVQVRTLRAVFGLVIFLLAIEMIVNGIR
                     GTV"
     gene            6781..7185
                     /locus_tag="VE783_03995"
     CDS             6781..7185
                     /locus_tag="VE783_03995"
                     /inference="COORDINATES: protein motif:HMM:NF019498.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HYX52587.1"
                     /translation="MKINRAGSQPSGKGPADWFTGTVRIDPLFVAPDPAFVQGASVTF
                     EPGARTAWHTHPLGQTLIVTAGCGWAQRDGGSIEEIRPGDVVWFAPGEKHWHGATPTT
                     AMTHIAIQEKLNGKVVDWMEQVSDEQYKRGNP"
BASE COUNT         1745 a         2163 c         2185 g         1427 t
ORIGIN      
        1 accacgtcca gaaactgatc ggtgtagaag gcagggttcg gaacctccaa cagcaggacc
       61 ccggcgcaga aaacgccctc tcagtaaaaa tggaattaca ggcagactgc ctggccggcg
      121 tttgggccca ctccacgcag cagcgcgatc tactcgaatc gggcgatgtt gacagcgctc
      181 ttggcgcggc ggcagccgtg ggagacgacc gcctgcaaaa aatggctacc ggccacgtaa
      241 gccctgaaac gttcacgcac ggcagctccg cacagcgaac gcaatggttc aagcggggcc
      301 tggaacaggg cacaattgag ggttgtaaca catttcaata aaccagagtc cgccccgcca
      361 cctcagctca gccgccgccg aacgtgacgg gcgtcacggc gcgtccaccc ctcggagtgg
      421 ctaaatagtt gcttctcgct ctcgtgcagg gccggcgagc agcagattgg agcgggacgt
      481 ggacattacc tgggttgcaa tcatctccgc aatcgtgatg ggcacaagcg cggcaatcat
      541 cgtattgttt ttcgtgaagc acgagcgaat tcagccctcc agcagcgctg aaagggcatt
      601 ctggtcaaaa cttgagcaat tggcgcgttc tgctccgggc ccgagccgat cgcgcacccg
      661 gccgcgcaac gcgtaaacgg cttcggcaca cctgtatcca ccccggccgg acgcccgggt
      721 tcttttctca ccataagcat cggcgcgagt ctatcctttg tgtctgaaag gagattccgc
      781 gtgaaagcaa tcccctctac cttcctgtat cttctcctcg ttcttgccac tacaacgctt
      841 cgagctcaaa agccacccga aggaatctgg cagggttacg acggcgagtg gaaacacgtg
      901 agcagccagc tgctcgcgct ggctgaggcg acgccggaag aaaagttttc atggcggccg
      961 gctcccggag tgcgttccac cagtgaggtc tacatgcata tcgccgtggc gaacttctgg
     1021 ctcttgagta tcactggccc aaaggcgccg gagaaccttg atttgaagct ggagaagtca
     1081 gtcacaaaga aagccgaggt aattgactgg ttgaagcgct cactggaagc ggtgaaaaat
     1141 gcgcacgaga aggtcacgcc caaagatctg gaccgcaaag ttcacattgc ggatcgggat
     1201 gccacggtag atggcatgta cctgcgcatc atagttcatg ccaacgagca tatgggacag
     1261 ctgattgcct atgcgcgcat gactggcgtg gtgccgccat ggtccaagga gtaaccgcga
     1321 atccatctta gctggaagga cgtcgccact ggcgctggaa gtcaccgatc gaaataggcg
     1381 gcaagtacgt gccgacgagt tcccgtgtcc accatgctcc agtctcgcgc aactggcgag
     1441 gatcggtata ccgatagtgg tagaacagag ctcgtatgaa ggttggctgc ttgccggaga
     1501 agggcgtttt gcttagcaat ctcagtgtgg cgggatcatc ttcgagcagc ttgcggatga
     1561 agttcaggaa ccaaagctcg aagccgggca catagagtcc gccggtataa accgttacgg
     1621 aaaacggcag aaaccacatc atccagtcca gccgaaggtg gtaaggagcg tattgcgcag
     1681 gcatgcgcct cagatcgccg ggcttcgcct tgaactcata ttcacgccac tgagtctgct
     1741 cggtaatgaa gggagcgtca gtggattcga tcacaacttc atagcgttca cgcgtgacgc
     1801 tgccaaaggc gccgtaggtg ttcaccagat gatagcggtt gtagctgtaa ttcatcatct
     1861 ggttgcgcga gaagaggttc gcggtcggct tgatgctgag ccacacggtg ccggcggcga
     1921 gcgcataaag aatgatgtca acgtaaagag gcggcgccaa caaagccggt gtaaaaaccg
     1981 gcagcaccca gcgaaacacg gaatcgttga gtgcactgaa gccgagtgca aaggtcagcc
     2041 agttcagcca ggagtagttg ccgctcacaa tcagcaggaa ctggtgaaac atggtgaagc
     2101 ctccggcaat ggaagcgatt ggctgaggtg cgagcaatcc aaagggaaca atgacctgca
     2161 caaagtggct gaaaatcacg ccgaagcggt gcatgacttt gggctgacga tgaaaaagcc
     2221 agctcagcgg attggggatg ggctgggttt catagtgata gtaaaggcat gtcagttcgc
     2281 gccagcaggg atcgtggcgc agcttgatga gtccggcgcc cagttcagtg cggaacagca
     2341 tccagcggag gattagcatg ggaatggccg gcgcctgcat gcgggctggg ccgagaaatg
     2401 ctatgaagaa acccgcttcc agcagcattg attcccagcc gaagccgtaa aatttctgcc
     2461 cgacattcac gatggagaga taaaggaacc acagtgcaag ccacacgatt aatcccgccc
     2521 agtacggcag aacgtcagtg agcccagcca cagcagcggc agagagcaca aggccgatcc
     2581 agcccacaca ggtcaacaag cgatctgaat agcgccaatg gaagaggctg ggcgcgtcac
     2641 gccaggttgc gcgctcaaga aatgctggaa ccggcagcag tccatttttg cccagcaacg
     2701 gcttgaactg gcgcagcacg acgataaaag cgatcagata gatcgccgcg aaggcccgct
     2761 gcagcagcag ccgaaccagc cagaggtcgc cgaagtacca gtgcataagc gaactgaccg
     2821 tcacattatc cttccttttg aggggctgca tttcccaacc tgcgacacgc tagcgactca
     2881 acagtgagac gtgacgggca ctcagtttac cagtcgcgaa aatcgagagt agccaatcga
     2941 tatttgggtg cggacgccgc acctgtcgcg cgcaacttgc gccgcctcta agatggcgtt
     3001 tctccgcgta gcctcccgta cggttcacag gcgcggtatt cgcaaatgac tgtattgaaa
     3061 atagttccag atcaaagcac ctgtgatttg tgtcactgcc ggcttacagc gaatctccta
     3121 tcgttaacga tgtaaggtgg gggacgatga actccgggct gaaagtttcg aatggcgaag
     3181 tctgggcggc aattgcgtac cttgacccag agctggaggc tgagttgctc aaacgtcgcg
     3241 accggatccg ctacatgcgt ctgaaggccg gcattgccct ggtttcaatc ggtgcactag
     3301 gaatggcggc catcctgcgc tacttgccgg ccgtagcccg gattttcaat tagcattctc
     3361 ctcggccagg cagcgcgtgt atcccgacat tcaggcagag ctgtctaacc cgagttcccg
     3421 gaccttccgg ggttcccgaa tccagcccaa tcgggtaagc tagataggtc tatttattcc
     3481 acgccacagg ggtacatttt ggcagagatt cgattgcagg aaggcgagcc gctggagaat
     3541 gcgcttcgcc ggttcaaacg gaaggtccag gccgaggaca ttatcaaaga ggtaaaacgg
     3601 cactcgtatt acctgaagcc gggcgagaag cggcgggtaa aacaggcgct ggcgcgcaaa
     3661 cgcgcgaaga agaagatgcg caaggaccgc gatccccgtt ctgatcgcgg ctgagtgatg
     3721 tacgcgtctt ccttccaggc gcgaccggcc ggtcgcgccg aaagtgccgc cggtaataca
     3781 acgcggtaag gcggccctca tatgaatgtt cttccaatgc gcggcataaa aattctgcac
     3841 gttggggcgg acccggagct cttgtggctc cgcacggccg tgctgcgcaa gcactggcag
     3901 gtgcggtccg ttcacttcca ggatgcagag cgcgccctcc agcattctct ttatgacctg
     3961 gttttaatct gccactctgt gccaccggaa agccgggacg agattgaaca tttgatcgca
     4021 gaaagcgcct tcccgagcgc cgtcatcata ctgcggcagg acctgccgga agaccaggtg
     4081 gtacgcactg cgctgggatt gcaagtgagc agtgggccag acacgctggt ggcgcgcatt
     4141 gatcgcgtga tgcgcaaggc cggttagcag gctgcctgtg ttctgtccgc catcactggc
     4201 tgcgcgcatt gatcgtgctg aaggccgcct ttgcgccagc attgccgagc attttcgtaa
     4261 gcaatttccc gaacaaggat ctttggtgct gcccttcgcc ggcggaatgg ctgtttacgc
     4321 cggaccagat tccccgacca ataaagccat tggcacgggt tttgacggcc ctttgaagga
     4381 agccgcgctt gttcaggtgg aacgcgagtt ctcgaatcga cgtgcgcggc tgcagattga
     4441 ggtatccacg ctggcatcta caagcctcca cacagcgctt gccgcaagag gttacagggc
     4501 cagcggcttc gaaaatgtac ttggacattc tctgaggacg attggtcctg cggtggaaag
     4561 cgtcattgtg cagcccgcaa ccgggaatga actcacggcc ttcgctgacg tgatggtaga
     4621 agcgtttgcc agccctgacg agggcggcgt aggcggcgat gcgatccctc cctcggatga
     4681 gatacgcaaa tgggtgctta tcaccatgtc actgccggga tttcgtggat atctcgcgcg
     4741 cattggcgca gagattaccg gggccgcatc actgcgattc gacactggcg tggcgcagtt
     4801 cagcggtgca ggcacgctcc ccaaattccg ccgtcgcggc gtacagaccg cgctgctgcg
     4861 cgagcgcctc agggacgccg cgcgatccgg gtgcgacgtg ggcgtggtgg tcacgcagcc
     4921 ggcttcaaag tcacagcaaa atgcgcaacg cgaaggattt gccctgcttt atgcccggca
     4981 gttgtgggtg aaagacttta gtgcgcatag cgagcccact ccgagttctt gatccgggcc
     5041 tcaggagtta ttacccggcc agccagcgtt tcatgacttg gtatgcgttc tgatccgccc
     5101 gcagcgggga tgcgacttca atttcgagca caagaccatt gggatccgag aaatagattc
     5161 gttcattgtc aacccagcgg tatttaactc cgttcgcttc aagccgcgaa caccacaagt
     5221 caagctctgc tcgagtggcg acactcaggc cagcgtgctc cttctccgag tcaacttcac
     5281 gatcggcttc gccggctgtg cgcccagcgg tgaataccag gctgccacca tcgggcagcg
     5341 cgtaaatcag cattagtgat tctgacgccg caaacgcatt cgtcagcgtg agaccgagca
     5401 agcctgagta gaagcgatgc gttgcttccg ggtcgcgaca gggatgagcg acatggtcaa
     5461 tgcgcatctg aagattctgg cacaggctca ggttgcgtgc agcaggctga aaaccaggat
     5521 gcccaatacg atgaggctca ccacaacgta taggtggtcg cgctcaagat agaaacctgc
     5581 gaccgcgaga accacgcgcg cgacgggcgt cgcaatcagc agcaagagcc cgaactggat
     5641 caggccttca ctgcggaggt gactggcggc gctcgcgatg ctggtgaccg ccctaagatc
     5701 ggcagattcc gggcgaaatt gcttgtagtc cacacgctgc gcatggtgct ggaaaagata
     5761 cgctactcct cccagcagca cgaaagcggc cgccatcaga acgccggcgc gaagaaggtt
     5821 gccgatgaag ccctcaagcc gaaggtcatc catcgccttc ataccgtgcc tcggatgccg
     5881 ttcacgatca tctcgattgc cagcagaaag atcaccagcc caaagacggc tcgcagcgta
     5941 cgcacctgga cgcgcatgag caccttggtt cccagaaaag ctcccgcgag caccccgagc
     6001 atcaccggca tagcaatgcg cggatcaata tagccgcggc ccagataaac accagcgctt
     6061 gccgcagccg taacaccgat catgaaattg cttgtggtgg tggaaacctt gaaggggatt
     6121 ttcatcgctc gatccatggc gattaccttc accgctcctg aaccgatgcc cagcaatccg
     6181 gaaagtgtgc cggcgccgaa catcagtccg aaccctgccg gaacgttccg aacgccatac
     6241 tcctgacgac gtccatgcag cgggtaatca cctccgagcc gcagtcgctt tgccagggcg
     6301 tccgattcaa tcggagcgct attttcgctg cgggccttga acactgcttc ataggcagat
     6361 tgcagaagca ccacaccgaa aatgatcgct atcaggtgcg tgccaaccct ggttgccagg
     6421 taagcaccga gaaccgcacc cagcgtggtt gcaatttcca gcagcatgcc gatgcggatg
     6481 ttcgagaatc cttccttgac ataagctgcg gctgcgcctg aagaagttgc aatcactgag
     6541 accagggaag cgccgatggc atacttgata tccacaccca gcaggagcgt gagcgccggc
     6601 acaatcacaa cgccacctcc cagccccgtg agcgcgccca ggaagccggc cgccatggag
     6661 gcgccccaaa ccagcaatgt gaaaaccagt gctgacatgt gaacgccata agtctaaatg
     6721 aaagcctggg aacgaacgcc accaggtatc ctttagcatc gaactcaagg agctcaacac
     6781 atgaaaatca acagagcagg ctcacaacct tcgggcaaag gccccgcgga ctggttcacc
     6841 ggaaccgtgc gaattgatcc gctcttcgtt gctcccgatc cagcgttcgt gcaaggcgcc
     6901 agcgtgacct ttgaacctgg agcgcgcacc gcatggcata cacatccgct cggtcagaca
     6961 ctcatcgtta ccgccggctg cggctgggcg caacgtgacg gcggctcgat cgaggaaatc
     7021 cggcccggcg atgtggtctg gttcgctccc ggcgagaagc actggcacgg agctacacca
     7081 actaccgcaa tgacgcacat cgccattcag gaaaagctta acggcaaggt ggttgactgg
     7141 atggaacagg tcagcgatga acaatacaaa cgcggcaacc cgtgattgaa ctgctggaag
     7201 gaggcaggag ttctatccag ttcctcactg gatcgagcaa actcaccgct ctgcgctaat
     7261 cgctcggcaa cgcctgcgat tccggcgctc ttgcagaact cacatgtttt ccgctttgat
     7321 ctttagctgt gggaagaaaa agtctgaagc acgtcccgct gcgcccgggt ctctggctgc
     7381 ttcgaaatct aagcacaccg cgatgtttag cgacaatgtt ctttgccagc caaaggccga
     7441 gccctgttcc tttcaattct ttcgtagtga aaaacggctc catgatacgc cggcgaatct
     7501 cacgcggaat accggggcca
//
LOCUS       DASQYP010000126        16335 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_237509, whole genome shotgun sequence.
ACCESSION   DASQYP010000126 DASQYP010000000
VERSION     DASQYP010000126.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 16335)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16335)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16335
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_237509"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(83..454)
                     /locus_tag="VE783_04000"
                     /pseudo
     CDS             complement(83..454)
                     /locus_tag="VE783_04000"
                     /inference="COORDINATES: protein motif:HMM:NF019819.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="lipocalin family protein"
     gene            complement(467..598)
                     /locus_tag="VE783_04005"
     CDS             complement(467..598)
                     /locus_tag="VE783_04005"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52588.1"
                     /translation="MFLGLFTSIGIAVAAAAGGAPSLATVPHVDLKRYMGLWYEIAR"
     gene            842..1141
                     /locus_tag="VE783_04010"
     CDS             842..1141
                     /locus_tag="VE783_04010"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52589.1"
                     /translation="MRNVVLEAAITLDGYIARPDGSVDYLFMPKGFSLEPFFKSIDVV
                     IMGRKTYEVGLKLGGFGMFKIPIYVMSHSMPEKEEGNLVFTHQSPRALITALRKE"
     gene            complement(1524..2363)
                     /locus_tag="VE783_04015"
     CDS             complement(1524..2363)
                     /locus_tag="VE783_04015"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52590.1"
                     /translation="MRTGVITLSLFVYLLAFAAVAGAQTNCDEGNGPLNPAQPSGISP
                     EDIIKKFAARELVFKEARDHYTYTQEILVQTIDGGTVDGEFRQVQDILYDDKGNRIEQ
                     VKYAPQPTLQRIIMTKEDFDDFRTRLPFVMTTDDLPQYDVLYAGQQKVDELDTYVFDV
                     APKKVDKHGGPRFFQGRIWVDNRDFQIVKTCGKNVPDIRSKGNENLTPKFVTYREQID
                     GQYWFPTYTKADDILHFKDQDVHVREIVKYTNYKRFGVKTRIIYNGQTIDPNQQPQQK
                     PPR"
     gene            complement(2493..3338)
                     /locus_tag="VE783_04020"
     CDS             complement(2493..3338)
                     /locus_tag="VE783_04020"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52591.1"
                     /translation="MKHSFTGRALCLMAFLTLLTLASPAQNGRTNCEAGTGPLDAAPP
                     KDTSIEAIIQKFAAEESRFKSELSNYSYVQDITVQTLNGTTVNGEFRRVSQISWEKGA
                     FKENVTFSPQSTLQDVSLSPEDFDDIYRSPFILTTENLPQYNIRYEGQQKVDEIETYV
                     FETTPKALDKGKRYFQGRVWVDRLGGQIVMSCGKTVPDEVPQQQKSKKKGKKGQPVQE
                     NVSPTIVTYREQFNGNWFPTYLRADETLHFQTNEIHIREVVKRREYQRSGAAQGNALV
                     QPAKK"
     gene            3454..5565
                     /locus_tag="VE783_04025"
     CDS             3454..5565
                     /locus_tag="VE783_04025"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012546.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S9 family peptidase"
                     /protein_id="HYX52592.1"
                     /translation="MRRSYVFLLLLLAFFAEHLIAQNVPAQHVFTFEDMMALKRVGSP
                     AISPDGKWVMFSAVDVNLEENKRTPHLWAVPLAGGPSHPLTNDPAGENEGRWSPDGKQ
                     ILFVSARGGSQQVWAANFDSDSGHLAGAPRQVTTISTEADGAIWSPDGKNIVFTSEVF
                     PGCADDLCNKYSEEERAKSKVKAMVFNRLFFRHWNNYNPFKRTHLFVVPVGGGTAKDL
                     TPGDHNVPPFSLGGQDLYAISPDGKEVAFTSNIDEVEAISTNNDIFIVPITGGEPKKL
                     SNSPGSDSTPLYSPDGKWLAWRMQTRAGYESDRFRLVVCDRKTGKIANLTEDVDRWVE
                     NFAWSPDSQIIYFTSTDKGEIPIYRINAVSHAPRHDSLSNKGKLPSTDYYDVEEVTRG
                     ANDDVQVSPDGKALVFSRMSVQAPNEIYRFTIGDKQAQQITHMNDLVLSRVIMQPLQS
                     FWFTGAMGTKVQGFLIKPPRFDEHRKYPVKFLIHGGPQGAWGDEWSYRWNPELFASSG
                     YVVIMINPRGSTGYGQKFIDEINGDWGGKPYVDLMNGLDYAEKTFPFVDKDRECALGA
                     SYGGYMINWILGHTTRFKCLVSHDGMFNTESAYGSTEELWFPEWEFKGTPWNNREIYR
                     KWSPHLFATNFKTPTLVVHGQLDYRLDVSEGFQLFTTLQRLKVPSAMLYFPDEGHWVL
                     KPQNSALWYKTVNGWVEQWAK"
     gene            5623..6327
                     /locus_tag="VE783_04030"
     CDS             5623..6327
                     /locus_tag="VE783_04030"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52593.1"
                     /translation="MLKPVLIVTCLAASVCFAQEPEKKNQPAADQPKVKVNYLNVCAP
                     AAEDQAELRSAFARIPAKPSFGPDFEISRGHATLQDSPDSRFVRLRRDMAADSPFLTA
                     QYSISRDSTNIIETLVLRLRDPKQFHEMSLEDRVSASAASPATVLSTETPVNRIRLER
                     FSKNSIVLARCPEGDQSAYDRLFREASDIMSRYRKALGLATAFRYDVNWLTNSASPAA
                     SSKPAASTNAAQKKQP"
     gene            6387..7325
                     /gene="trxB"
                     /locus_tag="VE783_04035"
     CDS             6387..7325
                     /gene="trxB"
                     /locus_tag="VE783_04035"
                     /EC_number="1.8.1.9"
                     /inference="COORDINATES: protein motif:HMM:TIGR01292.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004791 - thioredoxin-disulfide reductase
                     (NADP) activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin-disulfide reductase"
                     /protein_id="HYX52594.1"
                     /translation="MDTSIRDTVILGTGCAGLTAAIYAGRANLKPLVIEGHEPGGQLS
                     LTTLVENFPGFPEGIQGPELIENMRKQAARFGAEYMAGHLVKADLMERPFKLDFGGGK
                     IIHTRTLIVASGATARWLGLPSEQALIGHGVSSCATCDGFFFSGKPITVIGGGDSAME
                     EALFLTRFATKVTLIHRRDHFRASKIMLDRARKHEKIEFLTDTVVEEVNDVSAKEVTG
                     LKLRNLKSGKVWDFPTSAMFLGIGHEPNARMFNGQLDKDADGYLKTRDFVFTNVPGVF
                     ACGDVQDRRYRQAITAAGSGCAAAIETEKFLEEHGR"
     gene            7795..8712
                     /locus_tag="VE783_04040"
     CDS             7795..8712
                     /locus_tag="VE783_04040"
                     /inference="COORDINATES: protein motif:HMM:NF013761.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="proline dehydrogenase family protein"
                     /protein_id="HYX52595.1"
                     /translation="MLRATFISLSESKSIRAAAEKTWIGQRLSRRFVAGNRVEDALAA
                     TQQMNKLGLGVSVDNLGENVTNAEEARHSAQLYHQMLDRISAQGLQANVSLKLTHMGL
                     DVDEKLAYDLAQGLVEHAARIDNFVRIDMEGSPYTQRTLDFVYRLHAQPENAGHVGAV
                     IQSYLFRSEKDVEQLIKKRIRVRLCKGAYKEPPEIAFEKKADSDANYVKLMKMLLKSG
                     VYHGIATHDENMIRATIDFAQKEKVPAAAFEFQMLHGVRRDLQLKLVKDGWRCRVYIP
                     FGTEWYPYLMRRLAERPANALFILKNLFR"
     gene            complement(8709..9884)
                     /locus_tag="VE783_04045"
     CDS             complement(8709..9884)
                     /locus_tag="VE783_04045"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF025025.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HYX52596.1"
                     /translation="MILFFWITGISLALIWLAPVIESAVYGHRVTTITDPKWAPPPGH
                     NLPSLSAVVPARNEAAAIEPAVRSLLALDYPSLSVVVVNDRSTDSTGEILDRIAEAEI
                     AATAKLRLIRVRELPPGWLGKTHAMWVGGRQTQSDWILFTDADCVFREDALRRAIFYA
                     EQTCTDHLVVMPTMLTQNWGEAMMIGFLEVAGAFAVRPWKVPDPEARDFIGAGAFNLV
                     RRSAYEQIGTFEALRMEIVDDLKLGETIKRARFRQDVVLGPGLVSLRWFEGVLGLMRN
                     VEKNMFALLRFRVSLVMGACLGLLFVNVWPFLGLLVAPNWTRAPFAVAIALIAVRYRQ
                     NQHVSGVPAIAFVANPLAAVLTAAAALRSAFAVLRDGAVTWRGTKYSLDELRKASRR"
     gene            complement(9881..11113)
                     /locus_tag="VE783_04050"
     CDS             complement(9881..11113)
                     /locus_tag="VE783_04050"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HYX52597.1"
                     /translation="MPRKPYPYTMLAVLTGLNILNYIDRNVLFAVQPLVKREFNLSDA
                     QIGWLTSAFFFTYMLAAPLLGWLGDRYPRKYIVVGGIMIWSGFTLLTWLVTDYDQLLF
                     RHTIVGIGEASYAAIAPTLIADSFPLEKRGRMLSIFFIGLPFGSAAGYLVGGYFAHHF
                     GWRAPFMVAGAPGFLLALVLLFLPEPQRGQFERENNASAQSSGDFWAAIGNLGRNGAF
                     VTACLGMATYTFAVGGMQVWIPTFLERIRGLNLQQANTTFGLITLFHGFVATLLGGWI
                     GDRLLKRYAGAYYTFPGIMMLIAVPFMVLAIYVAGPMMFPSIFMAVFFLLIGTAPTNA
                     ALVNSVAPSIRSTALAVNVFVIHLLGDAFSPALMGKVSDKTSLPTAFWMAFIAAGLSG
                     LILIYGARYVPRHKAAPA"
     gene            complement(11153..11899)
                     /locus_tag="VE783_04055"
     CDS             complement(11153..11899)
                     /locus_tag="VE783_04055"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52598.1"
                     /translation="MSKILLASTAVFLSAVLSSAQTPNAPREVSFDQVRAAARTTLRD
                     SAEFPLRLTIETTFRDKSGKIISQKKGRTDYNFHGFNPRAGQANFDLRGSRGTFASAV
                     NTFFAISMLGSVVWEDAEKVYAVQITDDAAQPDLVSARLSPPGCDPFKWSEKHQSVES
                     YCGTSELHLHRRDLTLDRYEFEASGLPAPAIVKPFGNTTILKVHVSYDFQNITIPTDP
                     KPYLLPQHMNTTIETDKGTLQISTIVSQRN"
     gene            complement(11906..12301)
                     /gene="queF"
                     /locus_tag="VE783_04060"
     CDS             complement(11906..12301)
                     /gene="queF"
                     /locus_tag="VE783_04060"
                     /EC_number="1.7.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002636888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0033739 - preQ1 synthase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="preQ(1) synthase"
                     /protein_id="HYX52599.1"
                     /translation="MSNRTGYTEDHAKSGLDHRFPQIDTWPNQFPAYEIVIDVPEFTS
                     VCPKTGLPDFGMIDIRYMPDQLCMELKSLKEYLTEYRNLGIFQENIVNQILEDVVRAT
                     KPKWAIVKGVFRPRGGIGTTVEARWPRPD"
     gene            12490..13740
                     /locus_tag="VE783_04065"
     CDS             12490..13740
                     /locus_tag="VE783_04065"
                     /inference="COORDINATES: protein motif:HMM:TIGR01730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HYX52600.1"
                     /translation="MAKQAHNGSDRRHLLSAIVLAVAALLIFTGWMRLRNTVVSVRAE
                     SVTRQDISSVISTNGKIEPVRNFEAHAPAPATVRKVLVTEGTRVKPGQLLVQLDDAEA
                     RAQAAKALAALRAAEADLQAVKSGGTHEEVLTTRADLQKAQAERDDARRNFQAVQKLQ
                     QTGAASPAEVEAAQNRLKRAEADAQLLEAKQSGRYSSPEVARVEANAEQARAAYAAAQ
                     DLIRNTNIQAPFTGTVYQLPVKEGSYVQGGELLVAVANLEKVQVRAFVDEPEIGRLAV
                     GQKVEVKWDAVPGRTWEGTLTRVPSVVTMVGTRTVGEVTCEIDNSDRKLLPNVNVNVA
                     IVAARHNGTLTVSREAVHDIEGKRYVYQIDGQKLQAQEVQTGLSSLTRVEITKGVTQG
                     EQIALGAVNAAPLRTGMEIKVVER"
     gene            13785..14696
                     /locus_tag="VE783_04070"
     CDS             13785..14696
                     /locus_tag="VE783_04070"
                     /inference="COORDINATES: protein motif:HMM:NF025910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HYX52601.1"
                     /translation="MAQAVDAPPEQLLRDGRADEARRALNAAVNKNPDDAEAYNLLAR
                     MYFQLEMWDNSLRNAEKAANLQQNNSDYHLWLGRAAGRKAEASNPFTAWNLARKVRAE
                     FERAVSLNGENLSARSDLAEYYLEAPGFLGGDKKKAREQGDAVKAKDPALASYIYAKL
                     AEKQGASNAEEQYKTAIRESGNESRYWIELAHFYRRAGRLSEMDSAIAQALAATHEDS
                     APEYEGAYLLLRTNRNLNNGIQMLRRYLSNNSASEDAPAFRVHYLLGELLLRQGDKKG
                     AAEQYRACLALASEFHPAQDALARLSR"
     gene            14737..16083
                     /locus_tag="VE783_04075"
     CDS             14737..16083
                     /locus_tag="VE783_04075"
                     /inference="COORDINATES: protein motif:HMM:NF014385.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HYX52602.1"
                     /translation="MNSGLRVLIFAVPCLWLSASLSAQTPSVQPAAEQAGTRPVSFRS
                     AIEMALKNSASTAISRSDLQRAGAAVSQAKDAFLPQIIVGSGLGWSYGFPLSLEGAAP
                     SIFNVNAQQFLFNLAQRDYIRAAKSEQQIATVQAAERRNDTIMETAVDYMQLDLLDSS
                     LTVQREQQQAAAKYQDVVSQRIQAGLDSQVELTRAKLAVARTRLDIAQTQSAADALRM
                     RLSQLTGWQASSIRTVTESIPNLPDVSQSDDLAGEAEQKNGAVTIAMRTAEAKEFKAR
                     AERRQLYPAVDFAAQYAMLSRINNYDEFFNKFQRNNATIGAAFRFPLVNFAQRATADA
                     AKADANKARAEAATVKQQVGSDTIKLQRAVEQLAAAKEVAQLEHQLAQADIDATHAKI
                     ESGQASLKDEQNARVTEHQRYTAYLSSEFDLDKAQVQLLKQIGNLESWALGNAPAK"
     gene            16123..>16335
                     /locus_tag="VE783_04080"
     CDS             16123..>16335
                     /locus_tag="VE783_04080"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52603.1"
                     /translation="MSPVTHFLSGWALASAFAARLGKTEKALVTVAAIAPDIDSVGIL
                     PELLTRNTAHPLLWFSEYHHSLHTLAF"
BASE COUNT         3607 a         4724 c         4555 g         3449 t
ORIGIN      
        1 attaggcttg ctcagcgaga gaggtctctg gcgaccagaa ctgggattcg cgtttcgcag
       61 ttggctattg ccggcccatt ccctaaagag cgctctgcct cgtcttgatc aatttcgatt
      121 cgtcatagcc cgccgcccgg acctgttcca tcgcattttt ataatccagc tccgtcatgt
      181 tggccgtccg gctcaggatc cagagatatt tccgtgaagg ctcgcccacc actgcccagc
      241 gataatcgtg atcgaggccg atgatccagt agtcgccaga gaaaggccag aagaaggtca
      301 ccttgagctt ggcgttggag ccatccactg ccttggcttt gcccttcgca tctttgtgat
      361 tcccgtcttt ctttcggcag gagttcaaga ccttcacact gccgttctca aggagcgcgt
      421 actcggccgt cgaatctgat tcgcagtcgc gttggaagcg attaggttat cgggcaatct
      481 cgtaccacag ccccatatag cgcttcaggt ccacgtgcgg caccgtcgcg agcgatggag
      541 cgcctcctgc tgctgcggca acggcgatgc cgatggaagt aaacagtccc aggaacattc
      601 attctcctct ttgcgattgg atgtttcgtt gcgcgccttc gtcgcagcat ccgaacggga
      661 agcagctttc cttgtctcgc ggccgacgca ggacagacgt aatcatgatg agcaacttcc
      721 gcactcagta actcccgcca cctctctcct cggaatcggt tcctgtgcgc gccaaagctg
      781 atgtgttcgt gcccgcgaaa attctcaaac gtcgccgtgg gttgggctac aattctgcgc
      841 catgcgaaac gtggtgctgg aagccgctat cacccttgat ggatacatcg cccggccgga
      901 tggctcggtc gattacctgt tcatgcccaa aggcttttcc ctggagccct tcttcaagag
      961 cattgacgtg gtaatcatgg gccgcaagac ttatgaagtt gggttgaagc tgggcggctt
     1021 cggcatgttc aagattccga tttatgtaat gtcgcactcc atgccagaaa aggaggaggg
     1081 caacctcgtc tttacccatc aatcgccgcg ggcattgata accgcgctgc gaaaagagta
     1141 aggcaaaaac atctggctca tgggcggtgg cgaactcacg cgcagcttcc tgcaggaaga
     1201 cctcgttgat gaactttctt tcggagtggt tccgattctt cttggcgaag gtgtgcccat
     1261 gttcccggcg ggttttccgc aacggaattt cacgttggca gaaagcaaga gttactccgg
     1321 aggatttctg aggctgcact atcaacgcga tcgcaagcgg agtgtgccca aagaggctgg
     1381 cgctgttcca aagaagagaa ttggcgcgaa gcagaaaaag agagctgaag ggctctgaac
     1441 ccaatatcgg gatgtcttgt tagcgatgtc ccgatcccga tcttcagatc acccgatcgc
     1501 cagatctccg atcacccgat tgttcaccgt ggcggcttct gttgcggttg ctgattcgga
     1561 tcgatcgtct gcccgttgta gataatgcgg gtcttcacgc cgaaccgttt gtagttcgtg
     1621 tatttcacga tctcccgcac gtgcacatcc tggtctttga agtgcagaat gtcatctgcc
     1681 ttcgtgtaag tagggaacca gtactgtccg tcaatctgtt cgcgatacgt cacgaacttg
     1741 ggcgtcaggt tctcattccc cttgctgcgg atatcaggaa cgttcttgcc acaggttttt
     1801 acgatctgaa agtctcgatt atctacccag atgcggccct gaaaaaaacg cgggccgcca
     1861 tgtttgtcaa ctttcttggg cgctacatca aagacgtagg tgtccaactc atccactttc
     1921 tgctgcccag cgtagaggac gtcatattgc gggagatcgt cggtcgtcat gacgaatggc
     1981 agccgggtgc ggaaatcgtc aaaatcttct ttggtcatga tgatccgctg aagtgtgggc
     2041 tgcggggcgt atttcacctg ctcgatccgg tttcccttgt cgtcgtaaag aatgtcctgc
     2101 acctggcgaa attcgccatc caccgtaccg ccgtcaatcg tctgcaccag gatttcctga
     2161 gtatacgtgt agtggtcccg cgcctctttg aacaccagct cgcgcgcggc aaatttcttt
     2221 atgatgtctt cgggactgat accgctgggc tgtgccgggt tgaggggccc attaccttcg
     2281 tcgcaattag tctgcgcgcc ggctacggcc gcaaaggcca gaaggtacac gaatagactg
     2341 agagtgatta cgccagttcg catgagggaa taatcctgtg aatataagat gcgtgccggg
     2401 cttgctgagt tgctgagcag gagcgctaca cgaatcttaa cacgcccagc taccgagcgg
     2461 acggtttcgc gcctcactcg gtaactgctg gcttacttct tcgccggctg caccagtgca
     2521 tttccttgcg cagctccgct ccgctggtac tccctgcgct tcaccacttc gcggatgtgg
     2581 atctcatttg tctggaaatg aagtgtttcg tccgcgcgca ggtaagtggg aaaccaattg
     2641 ccattgaact gctcccgata ggtcacgatg gttggcgaaa cgttctcttg tactggctga
     2701 ccttttttgc ccttcttctt cgatttctgc tgctgcggga cttcgtccgg caccgtcttg
     2761 ccgcaactca tcacgatctg cccgcccagc cggtcgaccc agacgcggcc ctgaaagtac
     2821 cgctttcctt tgtccagcgc tttcggcgtc gtctcaaaaa cgtaggtctc tatctcatcc
     2881 actttttgct ggccttcata gcggatgttg tattgcggca gattttcggt tgtgaggatg
     2941 aacggtgacc ggtagatatc gtcgaaatcc tccgggctga gcgaaacatc ctgtagtgtg
     3001 gattgcggcg aaaaagtcac attctctttg aacgcgcctt tctcccagga gatttgcgaa
     3061 acgcggcgaa attccccgtt taccgtggtg ccgttcagcg tctggactgt gatgtcctgc
     3121 acgtaactgt aattgctgag ctcgctcttg aagcggcttt cttcggcggc aaacttctgg
     3181 atgatcgcct caatggaagt atctttcggc ggcgcggcat cgagcgggcc tgtgccggcc
     3241 tcgcaattgg tgcggccgtt ctgggccggt gatgcgagcg tcaggagagt caaaaaggcc
     3301 attagacaca atgcccggcc tgtaaatgag tgcttcatga tttttcttct ctgatattag
     3361 gcaactctgc cgccatatac tatcgcggaa cccatactgg ccggaaagcc aaaaaatatt
     3421 taaactggcg tgcttttttc aggaggttac cggatgcgcc gatcttacgt ctttctgctg
     3481 cttctccttg ctttcttcgc ggagcacctg atcgcacaaa atgttccagc ccagcacgtt
     3541 ttcacctttg aagacatgat ggctctcaag cgcgtcggca gccccgccat ctcccctgac
     3601 ggcaaatggg tcatgttctc agccgtggat gtaaacctgg aggaaaataa gcgtaccccg
     3661 catctctggg ctgtgcctct ggccggcgga ccatcgcatc cgcttaccaa tgatccggcc
     3721 ggagaaaacg aaggccgctg gtctcctgac ggcaagcaga ttctgttcgt cagcgcccgc
     3781 ggcggcagcc agcaggtttg ggccgcgaat ttcgattccg actccggaca cctcgccggc
     3841 gctccgcgcc aggtcaccac catctccacg gaagctgacg gagccatctg gtcacccgac
     3901 ggaaaaaata tcgttttcac ttcagaggtt tttcccggat gcgccgacga cctctgcaac
     3961 aagtacagtg aagaggagcg tgcaaaatcg aaagtcaagg cgatggtgtt caaccgtctt
     4021 ttctttcgcc actggaacaa ttacaaccca ttcaagcgta cccacctctt tgtggtgcct
     4081 gtagggggtg gaaccgcgaa ggacctgacg cccggcgacc acaatgtgcc tccgttcagc
     4141 cttggtggac aggacttata tgccatctcg ccggacggta aggaagttgc ctttaccagc
     4201 aacatcgatg aagtggaagc catcagcacg aacaatgaca tcttcattgt ccccatcaca
     4261 ggaggagaac cgaaaaagct ctccaacagc cccggcagtg attccacgcc gctctactcc
     4321 ccggatggca aatggctcgc ctggcgcatg cagactcgcg ccggttacga aagtgaccga
     4381 ttccgcctgg tggtttgcga ccgtaagaca ggaaaaatcg caaacctcac cgaagacgtc
     4441 gatcgttggg tagagaactt tgcctggtct ccggattccc agatcatcta cttcacctcc
     4501 accgacaagg gagagattcc aatctaccgg attaacgcag tttcccacgc gcccaggcac
     4561 gattcgctga gcaacaaggg taaactgccc tccacggatt actatgacgt tgaagaagtc
     4621 acgcgcgggg cgaacgatga cgttcaggtc tcgcctgacg gcaaggcgct ggtcttttcc
     4681 cgcatgtccg tccaggcgcc gaacgaaatc tatcggttca caatcggcga caaacaggcg
     4741 cagcagatca cgcacatgaa tgatctcgtg ctgtcccgcg ttatcatgca gcccctgcag
     4801 tccttttggt tcaccggcgc catgggtaca aaggtacagg gatttctgat caaacccccg
     4861 aggtttgatg agcacagaaa atatccggtg aaatttctta tccacggtgg gccgcagggc
     4921 gcctggggtg atgagtggag ctaccgctgg aacccggaac tattcgccag cagtggctac
     4981 gtggtcatca tgatcaatcc gcgcggctcc acgggctacg gtcagaaatt catcgacgaa
     5041 atcaatggcg actggggcgg caagccctac gtggatctga tgaacggttt ggactacgcg
     5101 gagaaaacct tccccttcgt ggacaaggac cgagaatgcg ccctgggcgc cagctacggc
     5161 ggctacatga tcaactggat cctgggccat accacccgat tcaagtgcct ggtctcgcat
     5221 gatggaatgt tcaacaccga atctgcctac ggcagcaccg aggagctctg gttcccggag
     5281 tgggaattca agggaacgcc atggaacaac cgcgaaatct accgtaagtg gtcgccccat
     5341 ctatttgcca ccaatttcaa gacgcccacg ctcgtggtcc acggccagct cgactatcgt
     5401 cttgacgttt cagaagggtt ccagctcttc accacattgc agcggctcaa agttccctcc
     5461 gcgatgctgt atttccctga tgaaggccac tgggtgctca aaccgcaaaa cagtgcgctg
     5521 tggtacaaga ccgtgaacgg ctgggtggag cagtgggcca agtagccagc ccagtaattc
     5581 agcgggtctg ctttgcgcgg ggcgatgatt taaaatcgcc ccgtgctcaa gcccgttctc
     5641 attgtcacct gtcttgccgc cagcgtctgc ttcgctcagg aaccggagaa gaagaaccag
     5701 ccggccgccg atcagccaaa agtcaaagtc aattacctga acgtctgcgc gcctgccgcg
     5761 gaagaccagg cggagctcag gtccgcattt gccagaatcc ctgccaaacc ctcatttggc
     5821 ccggactttg aaatctcccg cggccatgcc acgcttcagg attcacccga ttcgcgcttc
     5881 gtccggttgc ggcgggatat ggctgccgat tcgcctttcc tgaccgcgca gtattccatt
     5941 agccgtgaca gcaccaacat cattgaaacg ctggtgctgc gcctgcgtga tccgaaacag
     6001 tttcacgaga tgtcgctgga agatcgcgtc tccgccagcg cagcttcccc ggcaacggta
     6061 ctttcaacag agacgccggt caaccgtatc cgtctggagc gcttcagcaa aaactccatt
     6121 gtgctcgccc gctgtcctga gggtgatcag agcgcgtacg atcggctgtt ccgcgaagct
     6181 tcagatatca tgtcccgtta tcgcaaagcg cttggtctgg cgaccgcatt tcgttatgac
     6241 gtgaactggt tgaccaactc cgcttcgcct gcggccagca gtaaaccggc tgcaagtacc
     6301 aacgcagcgc agaaaaagca gccttgatct tcccggcctg tgccggttga atctaaatca
     6361 gaagtcagga atccaacctt tcagtcatgg acacctctat ccgcgatacc gtgattcttg
     6421 gcaccggctg cgcggggctc actgccgcca tctacgccgg ccgtgccaac ctcaagccgt
     6481 tggtaattga aggccatgaa cccggcggcc agctttcgct taccactttg gtggaaaact
     6541 ttcccggctt ccctgaaggc attcagggtc ctgaattgat cgagaacatg cgcaagcagg
     6601 ccgctcgctt cggcgctgaa tacatggccg ggcatctggt aaaggccgac ctcatggagc
     6661 gtcctttcaa actcgacttt ggcggcggca agatcatcca cacgcgcacc ttgatcgttg
     6721 ccagcggcgc caccgcgcga tggctggggc tgccgagcga gcaggccctg attggccatg
     6781 gcgtatcttc ctgcgcgacc tgtgatggtt ttttcttcag cggcaagccg atcacggtga
     6841 tcggtggcgg cgactccgcg atggaagaag cgttgttcct cacgcgcttt gctacaaaag
     6901 tgactctgat ccatcgccgc gaccacttcc gggcttccaa aatcatgctg gatcgtgcgc
     6961 gcaaacacga aaagatcgaa tttctcactg acacggtcgt agaagaagta aacgacgttt
     7021 ctgccaaaga agttactggc ctgaagctgc ggaacctgaa gtccggaaaa gtctgggatt
     7081 ttcccaccag cgccatgttc ctcggcatag gccacgaacc aaacgcccgg atgttcaatg
     7141 gccagctcga caaagatgcc gacggctatc tcaaaacccg cgacttcgtt ttcaccaatg
     7201 tcccgggtgt ttttgcctgt ggtgacgtgc aggaccgccg ctatcgccag gccatcaccg
     7261 ctgcaggctc aggctgcgcc gcggcgatcg agactgagaa gtttctggaa gagcacggcc
     7321 ggtaacgcgc caagttctcg aacgcgatgg ctacgtatcg atccgatatc gaggtgcagc
     7381 tcacttttgt tactacagag caaggtggtc gtcgaacgcc tgctcgtagc ggatatcggc
     7441 cgcagtttca ttacggtgga atggactggg atgcagtgca tacttacccc gacacggaac
     7501 tcgtgcaccc aggtcaaacc gttagagcct ttcttacctt cttatcgcct gaacagcacg
     7561 tcggtaaatt gtggccgggc atgacctttc aatgtcggga gggacagagg gtcatcgcaa
     7621 acggagtggt cgtcaaaatt ttggagttgc aacatggcag caacccgcac caatgaggcc
     7681 aactaccaga tatcgactac caagtaccaa atacccaata ccgccccgtt gtgttacaaa
     7741 catatgtttg ccttctatga ctgaaccagc ctctccgtgc cgcccaggag ttccatgctg
     7801 agggccacct tcatttctct ttctgaaagc aagtccatcc gtgctgccgc ggaaaagacc
     7861 tggatcgggc agcggctctc ccgtcgtttc gtggcgggca acagggtgga agacgccctg
     7921 gcagccacgc agcagatgaa taagctgggc cttggcgtca gcgtagacaa tctcggcgag
     7981 aacgtcacca acgccgagga ggcccgccac agcgcccaac tgtatcacca gatgctggac
     8041 cgcatctcgg cccagggcct tcaggcgaat gtgagcctca aactcaccca catgggtctc
     8101 gatgtcgatg agaagctcgc ctatgacctc gctcagggac tggtagaaca cgccgcgcgg
     8161 atcgacaact tcgttcgcat cgatatggaa ggttcgcctt acacgcagcg aacgctcgac
     8221 ttcgtgtacc gtctgcatgc gcagccggaa aatgccggcc acgtgggagc ggtcatccag
     8281 tcttatctgt tccgtagcga aaaagacgtt gagcagctca taaaaaaacg cattcgggta
     8341 cgcctgtgca aaggcgccta caaagaaccg ccggagattg ccttcgaaaa aaaggctgac
     8401 agcgacgcca actacgtaaa gctgatgaag atgctgctca agagcggtgt gtaccacggc
     8461 atcgccacgc acgacgaaaa tatgattcgc gcgaccatag atttcgcgca gaaagagaaa
     8521 gtccctgccg cggctttcga gttccagatg ctgcacggcg ttcgtcgtga cctgcagctg
     8581 aagctggtga aagatggctg gcgctgccga gtctacattc cgttcggcac ggaatggtat
     8641 ccctacctca tgcgacgcct ggcggaacgg ccggcgaacg cgcttttcat cctgaaaaac
     8701 ctgtttcgct agcggcgtga tgctttgcgc agctcgtcca gcgagtattt cgttccgcgc
     8761 caggttacgg cgccatctct cagtaccgca aaagcggaac gcaaagcagc cgctgccgtc
     8821 agcactgcgg ccaggggatt cgcgacgaat gcaattgccg gcactccgct gacgtgctgg
     8881 ttttgccggt agcgaactgc gatcagtgca atcgccaccg cgaaaggcgc tcgcgtccaa
     8941 ttgggcgcaa ccagcagtcc gagaaatggc cagacgttca cgaacagcag cccgaggcac
     9001 gcacccatca ccaggcttac tctgaaccgc agcaacgcga acatgttctt ctcaacgttg
     9061 cgcatcagtc cgagcactcc ttcaaaccag cgcaaactga caaggccagg gccaagcacc
     9121 acgtcctggc ggaagcgggc acgcttgatc gtctccccca gcttcaaatc atccacaatc
     9181 tccattcgca gcgcttcaaa cgtcccaatc tgctcgtatg cgctgcggcg caccaggtta
     9241 aatgctcctg caccgatgaa atcgcgtgct tcggggtcgg gtaccttcca cggacgcacc
     9301 gcaaaggctc ctgctacctc cagaaagccg atcatcattg cttcgcccca gttctgggtg
     9361 agcatggtgg gcatcaccac cagatggtct gtgcaggtct gctccgcgta aaagatcgcg
     9421 cgccgcaatg cgtcttcgcg aaacacgcaa tcagcatcgg taaacagaat ccaatcgctt
     9481 tgcgtttgcc ggccgcccac ccacatggcg tgcgtcttgc ccagccagcc cgggggaagc
     9541 tcgcggacac gaatcaagcg aagctttgcg gtcgctgcga tttcagcttc ggcaatgcgg
     9601 tccaggattt cccccgttga atctgttgag cgatcattga ccacaactac actcaaactg
     9661 ggatagtcca acgcaagcag tgatcgcacg gccggctcaa tcgccgcggc ctcattgcgg
     9721 gccgggacta ctgctgacaa cgaaggcaag ttgtggcctg gtggcggggc ccacttcgga
     9781 tcggtgatgg tggtcacgcg atgcccatag acagccgatt caattaccgg ggccagccag
     9841 atcaatgcca gagaaatgcc cgtgatccag aagaacagga tcatgcagga gcggccttgt
     9901 ggcgaggtac ataccgggcc ccgtaaatga ggattaagcc cgaaaggccg gcggcgataa
     9961 aggccatcca gaaggcggtg ggaagggaag tcttatccga tacttttccc atgagcgcgg
    10021 gagagaatgc gtcgcccagc aggtgaatca cgaagacgtt caccgccagc gcagtcgatc
    10081 ggatggaagg agccacggaa ttaaccagcg cggcatttgt aggcgcggtg ccgatcagga
    10141 gaaagaaaac cgccatgaag atggacggga acatcattgg cccggccaca tagatggcca
    10201 gcaccataaa cggaacggca atcagcatca tgatcccggg aaacgtgtaa taggcgccgg
    10261 catagcgctt gagcaggcga tcaccgatcc aaccgccaag aagggtcgct acgaagccat
    10321 ggaaaagcgt gatcagccca aacgtcgtat tcgcctgctg cagattgagc ccacgaatgc
    10381 gctcgagaaa tgtgggtatc catacctgca ttcctcccac ggcgaaggtg taggtcgcca
    10441 tacccaggca ggcggtaacg aatgcgccgt tgcgccccag attcccaata gccgcccaaa
    10501 aatccccgga gctttgcgca cttgcgttgt tctcacgttc gaactggccg cgttgcggct
    10561 cagggaggaa gagcaatacc agcgccagca ggaaaccggg tgctccggcg accatgaatg
    10621 gagctcgcca gccaaaatga tgggcaaaat atcctccgac caggtagcca gctgcagacc
    10681 cgaacggcag tccaatgaaa aagatcgaga gcatgcgccc gcgcttttcg agagggaatg
    10741 aatcggcgat cagtgttggc gcaattgccg catagcttgc ttcaccaatt cctacgatcg
    10801 tgtgacggaa cagcagttgg tcgtagtcgg tgaccagcca cgtaagcagc gtgaagccgc
    10861 tccagatcat gatgccgccg accacgatgt acttcctcgg atagcgatct ccgagccatc
    10921 ccaggagagg agctgcgagc atgtacgtga aaaagaacgc gcttgtcagc cacccgatct
    10981 gcgcgtcaga gaggttgaac tctcttttca ccaagggctg gacggcaaac agaacattcc
    11041 gatcaatgta gttaaggatg ttcagtccgg tcaggactgc cagcatggtg taaggatacg
    11101 gtttgcgcgg cattgggcag gaggattata cggtagagct ggcggccgca agctagttgc
    11161 gctgagacac gatggtgctg atctggagcg ttcctttgtc ggtctcaatc gtggtgttca
    11221 tgtgctgcgg aagcaggtag ggcttgggat cagtgggaat ggtgatgttt tgaaagtcat
    11281 atgagacgtg cactttcaaa atcgtggtat ttccgaatgg tttgacgatt gccggcgcgg
    11341 gcaggcccga agcctcaaat tcgtaacggt cgagtgtgag gtctcgccga tgaagatgca
    11401 actcgctggt gccacaatat gattccactg attggtgttt ctctgaccac ttgaacggat
    11461 cacagccggg cggactcagc cgggctgaga ccagatcggg ctgcgcagcg tcatcggtga
    11521 tctggactgc gtagactttc tccgcatctt cccagaccac actcccaagc atgctgatgg
    11581 caaagaaggt gtttacagcc gaggcaaagg tccctcttga acctcgtaaa tcaaaattcg
    11641 cctgaccggc tcgcgggttg aagccgtgga agttgtaatc tgttctgccc ttcttctgcg
    11701 aaatgatctt tccggacttg tcgcgaaaag tcgtctcgat cgtaagccgt agcggaaatt
    11761 cagcactgtc acggagagtg gtcctcgccg cagccctgac ttgatcgaaa gagacttccc
    11821 ggggagcatt gggtgtttgc gccgacgaca aaaccgcgct tagaaacact gccgtgctgg
    11881 ctaacaggat cttgctcatg cagcattagt ccggtcttgg ccaccgggct tccacggtgg
    11941 tgccgatccc gccgcggggg cggaagactc ccttcacgat cgcccatttc ggcttcgtcg
    12001 ctcgcaccac gtcttccaga atctggttca cgatgttttc ctgaaaaata cccaggttgc
    12061 ggtattccgt caggtattcc ttcaacgatt tcagctccat gcaaagctgg tccggcatgt
    12121 agcggatatc gatcatcccg aaatcaggca agccggtctt ggggcacacg gacgtgaact
    12181 ccggcacgtc gatcacgatc tcatacgccg ggaactggtt cggccaggtg tcgatctgcg
    12241 gaaatcggtg gtccagaccg gatttggcgt ggtcttctgt atatccagta cggtttgaca
    12301 tgaaatcata ttctagcaat cctgctgcag cgcacgccca cgctgctgtg atggcctgaa
    12361 acggaggtca actctcgggc atctaaacaa cagaagcgaa tcccgcaaac tgttgttccc
    12421 atggttccaa gatggcggtt ttgtgtcctg atgcgacgcg cttcgttata cttaaacttt
    12481 tgttaaggaa tggcaaaaca agcccataat ggctccgacc gccgtcatct gctcagcgcg
    12541 attgtgctcg cggtggccgc cctgctcatt tttaccggct ggatgcggct ccggaacacg
    12601 gtggtttccg tacgagccga aagcgtaacg cgtcaggaca tctccagtgt catctccacg
    12661 aatggaaaga ttgagcccgt ccggaatttt gaagctcatg ctccagcccc ggcaaccgtg
    12721 cgaaaagtac ttgtaaccga aggtactcgc gttaaacccg ggcagctgct tgtacaactg
    12781 gatgacgcag aagcgcgcgc ccaggcagcc aaagcgcttg cagctctgcg tgcagcggaa
    12841 gccgatctac aggcggtaaa atcgggcggc acccacgaag aagtgctgac gacgcgtgct
    12901 gatcttcaga aagcgcaagc agagcgcgac gacgcgcgta gaaacttcca ggcagtccag
    12961 aagctgcagc agaccggggc ggcttcgccg gctgaagtgg aagctgccca gaaccgcctg
    13021 aagcgtgctg aagccgacgc tcaactgctt gaggccaagc aaagcggccg ctattcgtcg
    13081 ccggaagttg cgcgcgttga ggccaacgcg gaacaggcgc gtgccgccta tgccgctgca
    13141 caggacctga tccgcaacac caacatccag gcgccgttta ccggtaccgt atatcagctg
    13201 ccggtgaaag aaggttctta tgtccagggc ggagagctgc tggttgcggt cgccaatctg
    13261 gaaaaagtgc aggttcgcgc ttttgttgac gagccggaga taggccgcct tgcggtgggc
    13321 cagaaagttg aagtcaagtg ggacgcggtt cccggccgca cctgggaagg aacgcttacg
    13381 cgggttcctt ctgttgttac catggtgggc acgcgcacag taggcgaggt tacctgcgaa
    13441 attgataaca gcgaccgcaa gcttttgccg aatgtgaacg tgaatgtggc gattgtggca
    13501 gcgcgccaca acgggactct gaccgtctct cgcgaagctg tgcatgatat tgaaggaaag
    13561 cgctacgtct atcagatcga tggccagaag ctccaggccc aggaagtgca gaccggactt
    13621 tccagcctca cacgagtgga aataaccaag ggcgttacgc aaggcgaaca aattgccctg
    13681 ggggcggtca atgccgcgcc tctgcgtacc ggcatggaaa tcaaggtggt ggagcggtga
    13741 ggtggctgcg ttctcttgtg attgtcccga tattcttcgt cttgatggct caggcagttg
    13801 atgcgcctcc cgagcagctc ctccgggacg gccgcgcgga tgaggcccgc cgtgcactca
    13861 atgcggcggt aaacaaaaac ccggacgacg cggaagccta taacctgctg gcgcggatgt
    13921 attttcagct cgagatgtgg gacaactcgc tcaggaacgc agagaaagcg gccaatctcc
    13981 agcaaaacaa cagcgactat catctgtggc ttggccgtgc cgccggccgc aaagctgaag
    14041 cttccaaccc attcaccgcc tggaacctcg ctcgcaaggt tcgcgccgag ttcgaacgcg
    14101 ccgtctccct gaatggcgaa aatctctctg cccgctccga tcttgctgaa tattaccttg
    14161 aggcccctgg attccttggc ggtgacaaga agaaagcacg tgaacagggc gatgccgtca
    14221 aagccaagga ccctgctctg gccagttata tctatgcgaa gcttgcggag aagcaggggg
    14281 ccagcaacgc tgaagagcag tacaagacgg caatcaggga gagcggcaac gagtcgcgct
    14341 attggatcga acttgcgcat ttttaccgtc gcgccggacg tctgagcgag atggactccg
    14401 ccattgcaca ggcgcttgcc gctacgcatg aagacagcgc tcctgaatat gaaggcgcgt
    14461 atctgctcct gcggaccaat cgcaacctca acaacggaat ccagatgctg cgccggtatc
    14521 tgagcaacaa cagcgcttcc gaagatgcgc cggctttccg tgtccactac ctgctcggcg
    14581 aactgctgct aaggcagggt gacaagaagg gcgcagccga gcaatatcgc gcctgtcttg
    14641 cattggcctc agagttccat cccgcgcagg atgcgctggc ccgtctttcc cgttaaaatc
    14701 tcgctttcgc actcattttg ttccgcaggt ggaaaaatga attctggtct tcgtgtgctg
    14761 atcttcgccg tgccatgtct ctggttgagc gcatcacttt ccgcacagac accttcagtg
    14821 caaccggctg ctgagcaggc cggcacacgg ccagtctctt tccggagcgc cattgaaatg
    14881 gcgctgaaaa acagcgcgtc gactgccatt tcgcggtcag acctgcagcg agccggtgct
    14941 gccgtgagtc aggccaagga tgcctttctt ccgcagatca tcgtcggctc cgggcttggc
    15001 tggtcatacg ggttccccct cagccttgaa ggcgccgcgc cctccatctt caacgtgaac
    15061 gcgcagcagt ttctgtttaa cctggcacag agggactaca ttcgcgctgc caaaagcgag
    15121 cagcagattg ccaccgtgca ggctgccgag cgccggaatg acaccattat ggaaactgcg
    15181 gtggactata tgcagctgga tctgctggat tcatcactga ccgtccagcg tgagcagcag
    15241 caggctgcgg ccaaatatca ggacgtggtg agccagcgta tccaggcagg ccttgatagc
    15301 caggtggaac tcacgcgggc aaagctggcc gttgcgcgta ctcggctcga tattgcccag
    15361 acacagtcag cggccgacgc actgcggatg agactctcac aattgacggg ttggcaggca
    15421 agctcaatcc gcactgttac cgagagcatc cctaaccttc ccgatgtttc gcaatccgac
    15481 gacctggcgg gagaagcgga acagaagaac ggcgcggtaa ccatagccat gcgcacggct
    15541 gaagcgaaag aattcaaggc ccgcgccgag cgcaggcagc tttatccggc agtggacttt
    15601 gctgcgcagt atgccatgct ctcgcgcatc aacaactacg acgagttctt caataaattc
    15661 cagcgcaaca atgcgaccat tggcgcggcg tttcgcttcc cgctggtgaa cttcgcccag
    15721 cgcgccacgg cagatgcggc caaagctgat gccaacaagg cccgcgccga agccgccacc
    15781 gtgaagcagc aggtgggctc ggacaccatc aagcttcagc gcgcagtgga gcagcttgcc
    15841 gcagccaaag aggtggcgca gctggaacat cagctcgccc aggcggacat cgacgccacg
    15901 cacgccaaga tcgaatccgg ccaggcgtca ttgaaagatg agcagaatgc ccgggtcacc
    15961 gaacaccagc gttacaccgc ctacctgagc tcagagtttg atctcgacaa ggcccaggtt
    16021 cagctgctga agcagatcgg gaatctggaa agctgggcgc tgggaaatgc tcctgcaaaa
    16081 taactctgtt gagccgttct gaaaccagaa gacctctaag agatgagtcc agtcacgcac
    16141 tttttgtccg gatgggcgct ggcaagcgcc ttcgccgcgc gtctcgggaa aactgaaaaa
    16201 gcgctggtga cggtggccgc gatagctcct gatatcgaca gtgtgggaat tctcccggag
    16261 ttgctgacac gaaatactgc gcatccgctc ctctggtttt cggagtatca ccactcgctc
    16321 cacacactgg ctttc
//
LOCUS       DASQYP010000127         2765 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_71911, whole genome shotgun sequence.
ACCESSION   DASQYP010000127 DASQYP010000000
VERSION     DASQYP010000127.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 2765)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2765)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2765
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_71911"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..825)
                     /gene="pstS"
                     /locus_tag="VE783_04085"
     CDS             complement(<1..825)
                     /gene="pstS"
                     /locus_tag="VE783_04085"
                     /inference="COORDINATES: protein motif:HMM:NF024257.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009897 - external side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0015415 - ATPase-coupled phosphate ion
                     transmembrane transporter activity [Evidence IEA];
                     GO_function: GO:0042301 - phosphate ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter substrate-binding
                     protein PstS"
                     /protein_id="HYX52604.1"
                     /translation="MKAPRYFAIIAALLASVVLPGCNSQKASDGSSTGAITITGAGSS
                     FVAPIMERWIADYRNTHPNVQITYQSIGSGGGIQQLKKQLIDFGASDAALSDDQLKDM
                     PVPVVQIAESAGPVCITYNLPDLKQPLKLSSSALAGIFMGTIKKWNDPSIARSNPGVK
                     LPKDDIIVAHRSDGSGTTNIFTNYLATVSPDWAQKVGKGLSLNWPVGVGGKGSEGVTG
                     VVKQSPGGIGYVELSYATQNHLPVAQMQNKAGKWVTPSAQAATAAIASFKTQLDSDL"
     gene            complement(976..1677)
                     /locus_tag="VE783_04090"
     CDS             complement(976..1677)
                     /locus_tag="VE783_04090"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52605.1"
                     /translation="MLILMPFNPEDFISGGYFLTKRVQRPRDVSDLIPESFLTISNCF
                     ASLAPDMWAEAGYNYEPQERVEKAAEFGIPASALPALVELFTSTEQPHHSNAFPKFAV
                     AREFYRHCADKNSIALLGIGLEPSLVESFRSQLTDDVNHGYGLEERIKLNNRLAPAGT
                     PLGFEPLGYDATKFHSWLCHNAPVEALQKFGVRPNSMGFIDSLEDAVRVTRDLKATGA
                     EPAIWEPWLIVQYAA"
     gene            1898..2068
                     /locus_tag="VE783_04095"
     CDS             1898..2068
                     /locus_tag="VE783_04095"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52606.1"
                     /translation="MFPLFSLYIAHGTLAYVGTAIAVLVGLAFRVVLFLQPGKGNPLW
                     RQLFFKKPHQPL"
BASE COUNT          566 a          703 c          875 g          621 t
ORIGIN      
        1 caagtcacta tcgagctgcg ttttaaagga agcgattgcc gcggttgccg cctgagcgct
       61 gggagtgacc cacttgccgg ctttattctg catctgggcg acaggaagat ggttctgggt
      121 ggcatagctc aattccacat agccgatgcc gcccgggctc tgtttcacca ctccggtcac
      181 gccctcgctg cccttaccgc ccacgccgac cggccaattc agtgagagcc ccttacctac
      241 tttttgggcc cagtccggac tgacagtggc caggtagttg gtgaagatgt tggtggtgcc
      301 gcttccgtct gagcgatggg cgacgataat gtcatcttta ggcagcttca cgccggggtt
      361 tgatctggcg atggagggat cattccattt cttgatggtt cccatgaaaa tgccagccaa
      421 tgcactggag ctgagcttga gcggctgttt gaggtccggc aggttgtaag tgatgcacac
      481 gggtccggcg ctctcggcga tctggaccac cggcacgggc atatccttga gctggtcgtc
      541 agaaagggca gcgtcactgg cgccgaaatc gatgagctgt ttcttgagct gctgaatgcc
      601 gccgccgctg ccaatggact gatacgtgat ctggacgttg ggatgagtgt tgcgatagtc
      661 ggcgatccag cgctccatga tgggtgcgac aaatgagcta cccgccccgg tgatggtgat
      721 ggcgcccgtc gacgaaccgt ccgatgcctt ttgcgagtta caaccgggca gaaccacgct
      781 tgcgagcagg gcagcgatga tggcgaaata tctgggagct ttcatgactt ctccttccat
      841 ggcatatggg ccaccatgct acgccgcgaa gtttaaggtt gtgtgaattg agatcgggat
      901 gcgatatagc ggagatcatg aggagagttg ccggtgggaa aaagatgagt gaacgcgaat
      961 gtcagttaac gccattcatg ccgcgtattg cacgatcagc cagggttccc agatagcggg
     1021 ctcggcaccg gtggccttga ggtcgcgggt tacgcgcaca gcgtcttcca gcgaatcgat
     1081 gaaacccatc gaattgggac ggacaccaaa tttctgcaag gcttcgaccg gagcattgtg
     1141 gcagagccaa ctgtggaatt tggtggcatc atagccgagc ggctcgaagc ccagcggtgt
     1201 gcctgcaggt gcgagccggt tgttcagctt gatccgttcc tccaggccgt agccgtggtt
     1261 aacgtcatcg gtaagttgcg aacgaaagga ttccaccagc gacggctcaa gcccaattcc
     1321 aagcagggcg atggaatttt tgtccgcgca atgacggtag aactcgcgcg caacggcgaa
     1381 cttgggaaac gcattggaat gatgaggctg ctcagtagag gtgaagagct ctaccaaagc
     1441 tggcagggca gaagctggga tcccgaactc ggcagccttt tcgacgcgct cttgcggttc
     1501 atagttgtag cccgcttcgg cccacatgtc cggggcgaga gatgcaaagc agttggagat
     1561 ggtgaggaac gattcgggga ttagatcaga aacatcgcga ggacgctgga cgcgtttggt
     1621 gaggaagtag ccgccgctaa tgaagtcttc agggttgaag ggcatcagga tgagcatagc
     1681 aggaggtgtt tgcggctatg tggttcacgc gctgagtacg gtcatgtcgg gcctgaggcc
     1741 cgctggagtt ttcgagacga ggtctgatgt cttcagttcg gactcaactg aggggtgtcg
     1801 cacctacggc gctcggaatg cttttccacc gacactgtcg taaatgaaat tctgcttcaa
     1861 gataatgatt tgagctagaa tcgaagaagg gccgaatatg tttcctcttt tttcgttgta
     1921 tatcgcccat gggacgcttg cctacgtagg aacggcgatt gccgtactgg tcggccttgc
     1981 attccgagtg gttcttttcc tgcagccggg aaaagggaat ccgctttggc ggcagctctt
     2041 tttcaagaag ccccaccagc ctctctgaag ggccagaagc ggcttactcc cgggggctgc
     2101 ctggacctgg aacttcgaaa tttttgaatg gctgaagagc cgaatcgcgc tgtaaatgtt
     2161 cgtcgtctgc acgcggggac tttgattggg tgggcgacga gccagcgcta aagcgccgct
     2221 tgttttaaag agcctgtcac gcactgaagg gcggtgcttc cacccttacg gctcaagcgc
     2281 ctgtttattt tgaagatctc tgttacatgc tgccgccgta atcttccctg ggatttcatc
     2341 tcacgcagaa aatgacaaat gggtcgtcag tggctcacgc cggactgcag cggagccgac
     2401 ccctgcattc gctcacctcg cgagctcggg tgcgcgattg gtcggggtgg ggcattcagg
     2461 gggagagatg cgggacgagg agccgagcgt gaaccggacg gttgcttttg gattcaagtg
     2521 aggggatgtc gcacctacgg cgctcggaat ttcctatgga cggttacccc cggttgcgct
     2581 tcgctccacc gggggctacg ctcgcggcgc gcctgacggc gctcggagta tcgaggctga
     2641 cgcggagcag catcgtgaag gatgcttgtt gtcggcagga gaagtctctg gtgggggcgc
     2701 atctagatgt agagaactga gcgaagcgtt gatcgtaaag aaggtcacct cagtcgctaa
     2761 agcca
//
LOCUS       DASQYP010000128         3181 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_259473, whole genome shotgun sequence.
ACCESSION   DASQYP010000128 DASQYP010000000
VERSION     DASQYP010000128.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 3181)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3181)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3181
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_259473"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..572
                     /locus_tag="VE783_04100"
     CDS             <1..572
                     /locus_tag="VE783_04100"
                     /inference="COORDINATES: protein motif:HMM:NF016269.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="lipid-binding SYLF domain-containing protein"
                     /protein_id="HYX52607.1"
                     /translation="KSLVDKSECVLVFPSVKKFAIGVGGSYGRGVITCRGGAHFTGPW
                     GAPAMMAIEGGNIGFQLGGQATDFVLLVVNPKGLQSILKSKVKLGADASAAVGPKGRD
                     AEAATDVLMHAEILTYSRSRGLFAGVSLEGSTLRADNSATEKLYGRKLSARDIVIGHK
                     AATPPSGQLLVSTLDKASPKNLSDPKSLQ"
     gene            647..1147
                     /locus_tag="VE783_04105"
     CDS             647..1147
                     /locus_tag="VE783_04105"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HYX52608.1"
                     /translation="MSDSPARLFRGLFESHLHVADLERAMAFYGDVLGLQPGFTDMER
                     RAALYWVGADKKSMLGVWEKPPWAQGKSATLPTPQHIAFQISLEDLTTAIQRVKQRGL
                     QLTNFFGAVTDEPSVFAWMPAASIYFNDPDGHSLELIALLAEEPAPEIGVVSLTEWNT
                     LQSSRP"
     gene            complement(1529..2764)
                     /locus_tag="VE783_04110"
     CDS             complement(1529..2764)
                     /locus_tag="VE783_04110"
                     /inference="COORDINATES: protein motif:HMM:NF012958.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase-fold protein"
                     /protein_id="HYX52609.1"
                     /translation="MRLRAFSTFLIVSLASLAAIGQNLAPPAPERITIHSNVLNEDRA
                     ILVRMPAAAQGKKDKYPVLYLADGDGHINEVGAIIDFLAAQNRCAPMMIVGIPNTDRT
                     RDLTPTRVDVKNAEGALVQPQPNSGGGDKFLEFIQTELFPEIEKRYQPQPYRIFAGHS
                     LGGLLAIHALIAHPDMFNAYIAVSPSLQWDNQHTLHQAQAFFAKQKELNKTLFFSLGN
                     EGATPNPMSEGFEQLQKLFTTTKPKGFIVRSARYPDEDHGSTTFLAHYAGLRTVFDGW
                     VMPRDPKDGLPVGGLKGVEQHYRELSERFGFPVSAEQTINLMGYNLLGQKKIEDALAA
                     FRRNVELYPGSANVYDSLADGLEAAGKTDLAHENVEKAVTVGTATNDPQLPQFKQHLD
                     RLVTAAAAATAGSQAAQAK"
BASE COUNT          606 a          914 c         1002 g          659 t
ORIGIN      
        1 cgaaatcgct cgtggataaa tccgaatgcg tactggtctt tccttcggtg aagaaattcg
       61 ctattggcgt tggcggcagc tatggacgcg gcgtgattac ctgccgtggc ggagcgcact
      121 ttaccggacc gtggggcgcg ccggccatga tggcaattga aggcggcaat atcggctttc
      181 aacttggcgg ccaggctaca gatttcgtcc tcctggtggt aaatccgaaa gggctgcagt
      241 ccatcctgaa gagcaaggtc aagctgggcg ctgacgcgtc ggctgccgtg ggccccaagg
      301 gccgcgacgc cgaggctgct actgacgtgc taatgcatgc cgaaatcctt acttattctc
      361 gctcgcgcgg gctttttgcc ggcgtttcac tggaaggctc cacgctgcgc gctgacaaca
      421 gcgccaccga aaagctgtat ggccggaaac tctcggcacg ggacatcgtg atcggacaca
      481 aggccgcaac accgccgtcc ggccaactgc tggtcagcac tttggacaag gcctcgccaa
      541 agaacctttc ggacccaaag tcgctgcagt agcatcgaaa gctgtaccgc tgatgagcgc
      601 tggtctgccg aaactgagca accggctcag cggaagagct ttcatcatga gcgactcacc
      661 tgccaggtta tttcgcggac tgtttgagag ccatctccac gttgccgatc tggaacgggc
      721 gatggccttt tacggcgacg tgcttggcct gcagcccggt ttcacggata tggaacggcg
      781 cgcggcgctt tactgggttg gcgctgacaa gaagtcaatg ctgggcgtct gggagaagcc
      841 gccgtgggct cagggcaaat ccgcaaccct ccccacgccg caacacattg cattccagat
      901 ttcgctggaa gacctgacca cggccatcca gcgcgttaag cagcgaggtc ttcagctcac
      961 aaacttcttc ggcgcagtca ctgacgagcc gagcgtcttc gcctggatgc ccgccgcgtc
     1021 catttacttc aacgatccgg acggccactc gctcgaactg atcgcgctgc tggccgagga
     1081 accggcgccg gaaatcggcg tagtctcgct gacggagtgg aacacgctgc agagctcccg
     1141 cccatagcct tgccattgag ctcctttgtg ccctctgctg tcgatcgggc tcagttcctc
     1201 tgtcccgaaa aggcatcctt gtcgatgctc cacgagttct gccattgtct tccctcctga
     1261 aggacccacc ccggaccgag atcgaccgaa tgggaggtcg cagtgtgagg ggccgccttc
     1321 gctgcagcct cgcgtgagcc cagatcacaa ccacttctca tgctttcgtg tgggatgtaa
     1381 tccctgacgt agctcagttt gactggccgt tccccaagaa agccagcggg cagggaattt
     1441 agccgcgaca acccaagtct ttgatcagcc aatcgctgct gcccggatgc agaccggacg
     1501 tttctccgat cctccggcgg cgcgcccgct attttgcctg tgcggcctgg ctcccggctg
     1561 tcgcagcggc ggcagcggtc acaagacgat ccagatgctg cttgaactgc ggcaattgag
     1621 ggtcgttcgt cgcggtgcct acggttacgg ctttttcgac attctcatgc gccagatcgg
     1681 ttttgcccgc ggcttcaagg ccatcggcca ggctgtcata gacgttggct gagccgggat
     1741 agagttccac gttgcgcctg aaggcggcaa gggcgtcttc aatctttttc tgacccagca
     1801 ggttgtagcc catcaggttg atggtctgct cggcggagac aggaaagccg aagcgctctg
     1861 acaattcgcg atagtgttgc tcaacgcctt tgagcccgcc cacaggaagg ccgtcttttg
     1921 ggtcgcgggg catcacccag ccgtcaaata cggtgcgcag gccggcgtag tgggccagaa
     1981 acgtggttga gccgtggtcc tcgtcaggat agcgcgcgga gcgcacaatg aagcctttgg
     2041 gttttgtggt ggtgaagagc ttctgcaact gctcaaagcc ctcgctcatg ggattgggtg
     2101 ttgcgccttc attgcccagc gagaagaaga gagtcttgtt gagctctttt tgtttggcga
     2161 agaacgcctg ggcctgatgg agggtgtgtt gattgtccca ttgcaggctt gggctcacgg
     2221 caatatatgc gttgaacatg tcagggtgcg cgatcagcgc atggatggcc agcagcccgc
     2281 ccagcgagtg cccggcaaag atgcggtaag gctgcggttg ataacgcttt tcgatctccg
     2341 ggaagagctc cgtctggatg aattccagga acttgtcgcc gccgccactg ttgggctggg
     2401 gctggaccag agcgccttcg gcattcttca cgtcgacgcg cgtcggtgtg aggtcacgag
     2461 tgcgatctgt gttgggaatg ccgacaatca tcatcggcgc gcaacggttc tgcgcggcga
     2521 ggaaatcaat gatggcgccc acttcattga tgtggccgtc gccgtccgcc aggtaaagga
     2581 ccgggtattt gtcctttttg ccctgcgcgg ccgcgggcat ccgcaccagg atggcgcggt
     2641 cttcattcag cacgttggaa tggatggtga tgcgctcggg cgccggcgga gccagattct
     2701 ggccaatggc ggcgagggag gcaagcgaaa cgatcaggaa ggtggagaaa gcgcgcagcc
     2761 gcatggtgaa gacctccagg ggaacgagga cggtgccgtt gggtttgacc cggggcggct
     2821 gggtttggtt agcgaagcga gtgggggagc aaaacggatt gccagaaatg ccaaaattgc
     2881 caaaaaatcc aaattgaatt ttgtcccgcc aggatggcgc ttttgggcgt gccccgctct
     2941 tctctttggc gctccggctg cgctggggct ggggcccagc gcgaagcgcg gaagagtgca
     3001 agcccggcgg cgtaagcccc gggtagggag caaaaataac ccttccgcac gccgtaggcc
     3061 ggcgcgaagc gaagcgcagc gctgaagagg agccgaggcg cagccgtagc gccaataaat
     3121 cgcgcgaacc gctcgcaatt cctttgcgtc ctctgcgtcc tttgcggtga aaatgttttt
     3181 g
//
LOCUS       DASQYP010000129         6776 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_237608, whole genome shotgun sequence.
ACCESSION   DASQYP010000129 DASQYP010000000
VERSION     DASQYP010000129.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 6776)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6776)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6776
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_237608"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1313
                     /gene="alr"
                     /locus_tag="VE783_04115"
     CDS             <1..1313
                     /gene="alr"
                     /locus_tag="VE783_04115"
                     /EC_number="5.1.1.1"
                     /inference="COORDINATES: protein motif:HMM:TIGR00492.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008784 - alanine racemase activity
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="alanine racemase"
                     /protein_id="HYX52610.1"
                     /translation="VGNGDLKSTAEGFKIAQPQGNVTQVANPDELKQQLLPMLRPGDT
                     VLFKGPRNAGMVKAVQDLSGAIAQRCLWVNLAAIEGNIARFRRHCGPGTHVLAMLKAM
                     AYGTALVQLAAWMSRLGVHHIGVSSANEGVAVRKTGAEQEIYVFLSEREDVDNLVRYR
                     LTPVIYSRELAEVFARSLQNGSGVLNVHLKIDTGMHRVGVSPEEALQVAEFIRSSGVM
                     RLTGVCTHFAAADDATADDFTLQQIASFESVLAKLRAAGFNQLNVHAANTSAAARFPQ
                     ARYNMVRVGLGLYGIYPSPAVQQALDLELAIGVTSRITSIQHFPLGATLGYNRTYTAP
                     RDIKVGIVPFGYDDGLPWGLAGKGSVLVEGVRAPIVGRISMDQMQVDVTDVPGAAVGA
                     EVLLYGTHNGHVLRPEEVAENAGTITHELLTRIGERVHRIYIEP"
     gene            1845..2297
                     /gene="rpiB"
                     /locus_tag="VE783_04120"
     CDS             1845..2297
                     /gene="rpiB"
                     /locus_tag="VE783_04120"
                     /EC_number="5.3.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418514.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004751 - ribose-5-phosphate isomerase
                     activity [Evidence IEA];
                     GO_process: GO:0009052 - pentose-phosphate shunt,
                     non-oxidative branch [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribose 5-phosphate isomerase B"
                     /protein_id="HYX52611.1"
                     /translation="MKIALGADHAGFELKNQIKTHLAEKGIETADLGTNSGESVDYPD
                     YAAAVAEEVSKGQSDLGILVCGSGIGMAISANKIHGIRAANACSEYEAQMCREHNNAN
                     VLALGARILSANQAVKIVDKWLATTFAGGRHERRVEKITALEHGELSA"
     gene            2691..6026
                     /locus_tag="VE783_04125"
     CDS             2691..6026
                     /locus_tag="VE783_04125"
                     /inference="COORDINATES: protein motif:HMM:NF017889.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0007160 - cell-matrix adhesion [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nidogen-like domain-containing protein"
                     /protein_id="HYX52612.1"
                     /translation="MRKRLLFAVFLVFPLLLVLSQPAHATTSRSAFCHSTDGAFTTCP
                     DGHAEWSDIPPVFFPQSNSYLYADQASLINPSGPPDTFLLMYDECSRTSPLGPNDYFL
                     VNFTNIDSDAGTPSLVHYNVHIFTDGTIIFLENGVVQLVNGQSRLPEVNGQRGRVGFG
                     PSPTCPFNHVIAEYQIPLQSAGSLTAQFDTTYSPDPLFWTSSVPPPKPPLPPCPDPGT
                     STPVTLAPVSAPVKLKLKDYRVIYGQLQLQFGSNGAGGGAQCSVTSNAGKLPVLFQDT
                     ELGFDFGPPIQVATSQAVATVQVFDTGGLDPSSIPQCNFSFGSNANGCFINAKPGGSA
                     RIAEWSSPGFNITGPLSVPITNTGPLNFFVNLDALNPPTGDFSSFLQSVETFVHQTLI
                     NNLDGVSTVAAFQDPPNNVLVIDPSGNRTGMLPDGTLVNEIPNAIYIQQQDRNAVVVV
                     DPNPGDYTTQIIGPADNAFSLSLSVTSFFPDIFVPSVTESDFQGTVSATGNSFVFNIP
                     VPGPRGSGGAIRPGFNSFILPPNDDGSSGLTPIGFPINFFGQTFNSLFVNDNGNITFD
                     LPLSEFTPFDLKTTQRAIVAPFFADVDTRVGNQVIYGPDTVNGHPAFGVTWPGVGCFA
                     VNTSVLNFFQVLLIDRSDSAPGDFDIEFNYNSIQWETGEASGGNAQCQGGASARVGFS
                     NGSGANGTFFELPGSGINDAFLDNNPASGLIHNSFGSNQAGRYVFQVRNGVPSTVVDS
                     DGDGVPDELDNCPNVPNPDQKDSDFDGVGDACSSPTQQRNTSAFLQALTTGQTFEEVT
                     GTTVADTPSLTNQLSRIVTFRTAAGLTNSPSQLATNLVNSLVAIGQVAPTDANNLIAS
                     VLGGGNHPPAIVCPPVTTNECTQSSGTQTSLTAQVTDADGDALSVNWSVDGSQVQTNS
                     VPGSTPPTSVGVTLNRPFTLGSHSLDIFVTDNRSTPVACHTTVTIRDTTAPVITASFG
                     QADLWPPDHQMINVGFNVTAQDQCSGPQAISVKVFSNESQNATGDGNFAPDATGGSGT
                     LQLRAERSGNGNGRVYLTVVKSSDPSGNSSFACTTAVVAHDDTVDSWQAVHAEADAAR
                     AFCSTHGGAAPAGYFAVATNGAP"
     gene            complement(6067..6540)
                     /locus_tag="VE783_04130"
     CDS             complement(6067..6540)
                     /locus_tag="VE783_04130"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52613.1"
                     /translation="MLSAAARRPLAAAWFGFFGFLASSLFFLRPGIKLPALCLYVLAP
                     AIAATLAGSFWGAAILDPTKTQTPGAAMLRGLGVTAGAFAIFAVLYALGLPLLERGWK
                     MSQAGGILVAALTLGLVMVGPLIAISGMLAGLTLFLLGRRATAAPGDQASNHPAV"
BASE COUNT         1463 a         2041 c         1937 g         1335 t
ORIGIN      
        1 tagtcgggaa tggcgacctg aagagcacag cggaaggatt caaaatcgca caaccgcagg
       61 gcaacgtgac gcaggttgca aaccctgacg aactcaagca acagcttttg ccgatgctgc
      121 ggccgggcga cacggttctc tttaaaggcc cgagaaatgc gggcatggta aaagccgtgc
      181 aggacctttc aggcgccatc gcgcagcgct gcctatgggt gaacctggcg gcgattgaag
      241 gcaacattgc gcgcttccgt cgacattgcg gcccgggcac tcatgtactg gcgatgctga
      301 aggcaatggc atacggcacg gcgctggtcc agcttgctgc ctggatgtcc cggctcggcg
      361 ttcaccacat tggagtgtct tccgccaatg aaggcgtggc cgtgcggaag accggcgccg
      421 aacaggaaat ctatgtgttt ctatcggaac gcgaggacgt ggacaatctg gtgcgctacc
      481 gcctcacgcc ggtgatctat tcccgtgaac tggcggaggt ctttgcgagg tcactccaga
      541 acggcagcgg tgtactgaat gttcatctga aaatagacac gggcatgcac cgcgtaggcg
      601 tctcgccgga agaggcgctc caggtggccg agttcatccg ctccagcggg gtgatgcggc
      661 tgaccggcgt gtgcacgcac tttgcggcgg ccgatgacgc gaccgcagac gacttcacgt
      721 tacagcagat agccagcttc gagtctgtgc tcgctaaact tcgtgctgcc ggattcaacc
      781 aactcaatgt tcatgccgcg aatacctcag cggcagcacg gtttccgcag gcgcgctaca
      841 acatggtgcg cgtagggctg gggctttatg gaatctatcc ttcgccagcg gttcaacagg
      901 cactcgatct ggaattggcg atcggcgtga ccagccggat caccagcatc cagcactttc
      961 cgctgggcgc gacgctcggc tacaaccgga cctacactgc gccccgcgat atcaaagtgg
     1021 gcattgttcc cttcggctat gatgacggct tgccctgggg tttagcggga aagggcagcg
     1081 tgctggtaga gggcgtgcgc gctccgattg tgggccgcat cagcatggac cagatgcagg
     1141 tggacgtcac ggatgttccc ggcgcggcgg tgggcgcgga agtgttgctc tacggcaccc
     1201 acaacgggca tgtgctgcgg ccagaggaag tcgcggaaaa cgcaggcacc atcacgcacg
     1261 agctgctcac gcgcatcggc gagcgcgtgc accggattta cattgagcca tagagtgccg
     1321 agcttttgcg ggaatgggta gtcagcgggc ggagtaggag gagggacctt gcgctttgtt
     1381 ttgagtagag gctctctctt gaaccaatca atcggggtaa acggtttgta gcacaggcgc
     1441 cctcgcctgt gccggattac tctcgactgc gccagatatc tttgatcttc tgctcccgtt
     1501 tagattttct cattctacgt cgcagatgtc gggatatatc ttggctggct ccaggctccg
     1561 gtttcaacca tatcaagtat gaatcgccct ctttttcatg cgcgcggcaa cttgccgcgg
     1621 taagttgtca ttctggtcgc acaggcgagg cgcctgtgct acaccgctaa aagcgcgaaa
     1681 tcggcctcaa tccacgaccc tgaactgatt tcagcttgta gcgaacgctg cagaaacttc
     1741 ttcatcatga accgtcgcga acggaagccc gactgcgcac gctcgccatg atgagcgggt
     1801 gcaatgatgc cgatctttct gtcagcgcag ggtagaatgg cggcatgaaa atcgcactag
     1861 gcgctgatca cgccggcttt gagctgaaaa accagatcaa gactcaccta gccgagaaag
     1921 ggatcgagac ggccgatctt ggcaccaact ccggcgagtc agtggactat cccgattatg
     1981 ctgcggctgt ggcggaagag gtgagcaaag gccagagcga tctcggaatc ctggtgtgcg
     2041 gcagcggaat tggaatggca atttcggcca acaagatcca tggaattcgc gccgcgaatg
     2101 cttgcagcga atacgaagcc cagatgtgcc gcgaacataa caatgccaac gtactcgcct
     2161 tgggcgcgcg aatactttct gccaatcagg ccgtgaaaat cgttgacaag tggctggcga
     2221 ccacgtttgc cggtggaaga catgagcgcc gcgtggaaaa gatcaccgcg ctggaacacg
     2281 gtgaactgtc tgcgtaacca agattctcac ctaacagctc agctgcagtt ccaaaatggc
     2341 acaaaaattc tctaatcttt gaatgtttct atcttttcac gagacaaaca gcaggaactc
     2401 cgttataacg tccgtcgcat aacaagctac tcaacgttca tccacaagca tgcgcgggcc
     2461 ccaattggct tgagtgcatc cgttcgcccg taaccgggcg agctgatcag ttgccaacgt
     2521 aacagcagtc catcctggtg ttccaggcca tccggggctg gagcacaaga aaacttcaac
     2581 gacgcatccg gcaatggcag gatgcgtgtc ttcgcggccg gcgaaccctt gctgtcacgc
     2641 catcgcggac gtgcgtcatc accgagttcc ccaaccagac aggtgaagtc atgagaaaac
     2701 gtttgctgtt tgcggtcttt ctcgttttcc cgctcctgct cgtgctctcc cagcccgcgc
     2761 atgccaccac cagccgcagc gccttttgtc attcaactga cggcgctttc acaacttgcc
     2821 cagacggcca tgctgaatgg tcggacattc ctccggtgtt cttcccgcaa agcaacagct
     2881 atctgtatgc ggatcaggcc agcctcatca acccgagcgg cccgccggat accttcctgc
     2941 tgatgtatga cgagtgctcg cgaacttcgc cgctcggacc gaacgattat ttcctggtga
     3001 acttcacgaa catcgacagc gacgcgggta cgccctcgct ggtccattac aacgtccaca
     3061 tatttacgga tggaactatc atctttctcg aaaatggagt ggttcagctg gttaacgggc
     3121 aaagccggct gccggaggtg aatgggcaac gcggccgagt gggatttggc ccttctccaa
     3181 cctgtccctt caatcacgtg attgccgaat accagattcc gctacagagc gccggatcgc
     3241 ttaccgctca gttcgatacc acgtattcgc ccgatccgct cttctggacc agcagcgttc
     3301 cgccacctaa gccgccgctg cctccatgcc ccgatccggg aacctccacg ccggtcacgc
     3361 tggcgccggt ttcggctcca gtgaagctga agctgaagga ctatcgcgta atttatggcc
     3421 agcttcagct ccagttcggc tccaatggag ccggtggcgg ggcgcagtgc tcggtcactt
     3481 ccaacgcggg caagctgccc gtcctcttcc aggacactga gctgggattc gacttcgggc
     3541 cgccaattca ggttgccacc agccaggctg ttgcgaccgt gcaggtcttt gacacgggcg
     3601 gcctggatcc ttcgtccatt ccgcagtgca acttctcgtt cggctcgaac gcaaatggat
     3661 gcttcatcaa tgcgaaacca ggcggctcgg cgcgaatcgc agagtggtcc agcccgggat
     3721 tcaacatcac cggtccgctg agtgtgccca tcaccaacac cggcccgctg aatttcttcg
     3781 tcaaccttga cgccttgaac ccgccaaccg gcgactttag ttcgttcctg caaagcgtgg
     3841 agacgttcgt tcaccaaact ctgatcaata acctggatgg cgtgagtacg gtggcggcgt
     3901 tccaggaccc gcccaacaac gtgctggtga ttgacccgag cggcaatcgc acaggcatgc
     3961 taccggacgg cacgttggtg aacgagattc cgaacgccat ctacattcag cagcaggacc
     4021 gcaacgccgt ggtggtggtg gatcccaatc cgggcgacta caccacgcaa atcattggtc
     4081 cggcagataa cgcattctcg ctctcactct cggtaacgag cttcttcccg gatatttttg
     4141 tgccgtcagt taccgaatcc gattttcagg gaaccgtttc cgccaccggc aacagctttg
     4201 tcttcaatat tccggtgccg ggaccaagag gttcgggtgg agcaatcagg ccgggcttca
     4261 actcgtttat cctgccgccg aacgacgatg gctccagcgg cctgaccccg atcgggttcc
     4321 ccatcaactt cttcgggcag acgttcaatt cattgttcgt gaacgacaac ggcaacatca
     4381 ctttcgatct gccgctttct gagttcacgc cgttcgacct gaagaccact cagcgcgcca
     4441 ttgtggcgcc cttcttcgct gacgtggaca cgcgcgtggg caatcaggtg atctatggtc
     4501 cagacacggt caacgggcat ccggcgttcg gcgttacatg gcccggggtg ggatgctttg
     4561 ccgtgaacac cagtgtcctg aacttcttcc aggtgttgct gattgaccgt tctgactcag
     4621 ctcccggtga cttcgacatc gagttcaact acaactcgat tcagtgggag acgggcgagg
     4681 ccagcggcgg caatgcgcag tgccagggtg gagcttcagc gcgcgtgggc ttctccaatg
     4741 gcagcggggc caacggaacg ttctttgagc tgcccggttc gggcatcaat gacgcgttcc
     4801 tggataacaa cccggcaagc gggctgatcc acaacagctt cggcagcaac caggccgggc
     4861 gctacgtctt ccaggtccgc aacggagtgc cttccaccgt ggtcgattcg gatggtgacg
     4921 gagttcctga cgaactcgac aactgcccga atgtacccaa ccccgaccag aaggactcgg
     4981 actttgacgg cgtaggcgat gcctgctcct cacccacgca gcaacgcaac acttcggcct
     5041 tcctccaggc gctgacgact ggccaaacct ttgaggaagt gaccggaacc accgtggccg
     5101 atacgccaag cctgaccaac cagctctcgc gaatcgtgac gttccgcacg gccgcaggac
     5161 tgaccaattc gcccagccaa ctggcgacca acctggtcaa cagcctggtc gcaatcgggc
     5221 aggtggcacc caccgatgcc aacaacctga tcgccagcgt gcttggcggc gggaaccatc
     5281 cgccggctat cgtgtgtccg ccggtcacga ccaacgagtg cacgcagtca agcggcacgc
     5341 agacatcact tacggcccag gttactgacg ctgatggtga tgcgctgtca gttaactggt
     5401 cagtggatgg atcgcaggta caaaccaaca gcgtgccagg cagcaccccg ccaacttctg
     5461 tgggggttac gctcaaccgg cctttcactc ttggatcgca ctctttggac attttcgtga
     5521 ccgacaatcg ctcaacgccg gttgcgtgcc acaccacagt gacgatccgc gatactacag
     5581 ctccggtgat cactgcatcg ttcggccagg cagacctgtg gccgcccgat catcagatga
     5641 tcaacgtggg cttcaacgtg accgcgcaag accagtgcag cggaccgcaa gccatctccg
     5701 tgaaggtgtt ctcgaatgaa agccagaacg ccaccggcga tggcaacttt gctcccgacg
     5761 caaccggcgg ctcaggaacg ctccagctgc gcgctgaacg cagcggaaac ggcaacggcc
     5821 gcgtgtacct gaccgtggtg aaatccagtg atccatcagg aaactcgtcg tttgcgtgca
     5881 ccacggcagt tgtggcgcac gacgatacgg tggattcctg gcaggcagtg catgccgagg
     5941 cagacgccgc acgcgcgttc tgctcgacac atggaggagc ggccccggca ggctactttg
     6001 ccgtggccac caacggagcg ccgtaattcc ggacgctcaa acgcgaagta acgacggaca
     6061 tccagatcag acggctggat gattagaggc ttggtcgccg ggagcagcag tggcccggcg
     6121 gccaagcaaa aataaagtaa gcccggcaag catgccggaa atggcaatga gcggccccac
     6181 cattaccagt cccagcgtga gcgcggcaac cagaattccg ccggcctggc tcatcttcca
     6241 gcctcgctca agcagaggca gaccaagagc ataaagcacc gcgaaaatgg cgaatgcgcc
     6301 ggcggtcact cccaatccgc gcagcatggc agcaccggga gtttgcgttt tggtgggatc
     6361 cagaatcgcc gctccccaaa acgagccagc gagcgtggca gcgattgcag gagcaagcac
     6421 gtaaagacaa agagcgggaa gtttaatgcc cggacgaaga aagaaaagac tcgaagccag
     6481 aaagccgaag aagccaaacc atgcagccgc aagtggccgc cgagcagcag cggagagcat
     6541 accgaccttc tttctacctt ctcctgcagc gattatacgt tcggttcgcg gccatccaac
     6601 gatgccgcgg cgctaaaacc ttctgcccgc gtgatagaag aaatagcagg cggagaggaa
     6661 tatggcttcc agttcaatga atgtcagcag gaagctgttg tgaatcctga ccaggatctt
     6721 gttttgcggg ctccattcgc tcaccggcgc ccgcaattgc aggccggcat acattc
//
LOCUS       DASQYP010000130         4256 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_237683, whole genome shotgun sequence.
ACCESSION   DASQYP010000130 DASQYP010000000
VERSION     DASQYP010000130.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 4256)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4256)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4256
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_237683"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..819)
                     /locus_tag="VE783_04135"
     CDS             complement(<1..819)
                     /locus_tag="VE783_04135"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52614.1"
                     /translation="MLDVSALPTSDKDAGQSKAFPSSSTSKPAAGSDPANGQAMAVTT
                     AAKSPCEEPAKLFSARDYSGPGKRFAAWFTRKPEMTTVPKNKGGQPICGLDAGQKFHL
                     FFKTTVDPVTFVGAAASAGWSQYQNYDEEWGQGAEGYGYRYAAAYGDRVISNFFGKFF
                     YPTLFHEDPRYFRKGTGGFGGRLGHAIDHSFVARTDSGGHFANVSNWAAIASSVAIAN
                     LYHPGHSRGFTPAAERFGTRFGTSMGFDVLKEFWPETVRALKLPFRERKNVPATD"
     gene            complement(1160..2218)
                     /locus_tag="VE783_04140"
     CDS             complement(1160..2218)
                     /locus_tag="VE783_04140"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="BON domain-containing protein"
                     /protein_id="HYX52615.1"
                     /translation="MKFSALLLRCKNANFLALLLFIAAASALSSALQVGLQVIPERSQ
                     ATAFLGSAENPKSFRVGEASVSGELLLNPNDISASHISLKIHESEKANPVRLGPQSGP
                     GYHSVITFESYNVQELSGGKLQAQGRMTVLQVVDIPPARNGGPDPEASIGSPKTHASR
                     EVTFVFGRLEQSASALGVHGGQGRMWVRGNTVIDGDAFPELSFSIQDVARSTPLDAAN
                     CINPTSPDEEDDADRSCLFQSQDREQPPAGNVVTILLNLALAGAPVVDTSAQEMQPRQ
                     PMHQNRTEINGRILSNLETAFDSDPVMTGSDLSVEVDDINIIISGSVQSFQQHQRALE
                     LTSTYYRYRNVIDRMSIQ"
     gene            complement(2240..2746)
                     /locus_tag="VE783_04145"
     CDS             complement(2240..2746)
                     /locus_tag="VE783_04145"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52616.1"
                     /translation="MRKYFYYIFGTLAILFVGFQFIPQMISTSFASSGPQFFSAHMSC
                     SGTGACTIPPGQEIAIPPGKRAFLQYASATASVDGIVPQQAMVRLTVPYFEASNTCSY
                     YEYGLPLTYEGLIGGKSRFTAAQQMNVIITPLEQNCPVQRGLGGYINSTSTSEDAVLE
                     LHLSGMVQ"
     gene            3152..3655
                     /locus_tag="VE783_04150"
     CDS             3152..3655
                     /locus_tag="VE783_04150"
                     /inference="COORDINATES: protein motif:HMM:NF017758.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF892 family protein"
                     /protein_id="HYX52617.1"
                     /translation="MPFKNPKEVFVKLLTDVRESSERMVKFFNEITPLVHEPEIKQAL
                     EARAFVYNNMIVTLDQCFKLIGEQPVKLSGKLRETLIENFREELSEIESPVAKKLFIL
                     TKLSHVIHLRIGELVALTAAADITGNYAVGVLLESVLAEQLAFVERNRRFLRNMIETK
                     IAEKVAA"
     gene            complement(3772..>4256)
                     /locus_tag="VE783_04155"
     CDS             complement(3772..>4256)
                     /locus_tag="VE783_04155"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52618.1"
                     /translation="NGKLIQTLNLCTNAPVPRREPVGSLSAADFNFDNYYDLALQTSS
                     ENGNAKYCVWLFDARQQRFVLNNQLSGVANIAPDPSTRTLQSYEYQGCNGVCFTRNTY
                     RWSEGQPQLVRSEVTTRAPLSVGYGGCEYVHSIKELKGGGVREVSRERVNALGVSCDL
                     "
BASE COUNT          961 a         1145 c         1199 g          951 t
ORIGIN      
        1 gtcagtagct ggtacattct tccgctcacg gaacggcagc ttcaatgccc gcacggtttc
       61 aggccagaac tcttttagaa cgtcgaaacc catcgacgtt ccaaagcggg ttccaaagcg
      121 ttccgctgcc ggagtgaatc cacggctatg gccgggatgg taaaggttcg cgatggctac
      181 gctgctggca atcgctgccc agttcgatac gttcgcgaaa tggccgccag aatcggtgcg
      241 cgccacgaaa ctgtgatcga tagcatgccc aagccggcct ccaaagccgc cagtcccttt
      301 gcggaagtag cgggggtcct catggaacag ggtgggataa aagaattttc cgaagaaatt
      361 gctgattaca cggtcgccat atgccgctgc ataccggtaa ccgtagcctt cggcgccctg
      421 gccccactcc tcatcgtaat tttggtattg tgaccagccg gcagaagctg ctgctcctac
      481 aaacgtgacc ggatcaaccg tagtcttgaa gaagagatga aatttctggc cggcatccag
      541 gccacaaatc ggctgtccac ctttattttt cggcacggtc gtcatttcgg gcttgcgcgt
      601 aaaccaagcc gcgaaacgtt ttcccggccc gctgtaatca cgagcggaga aaagcttggc
      661 cggctcctcg catggtgatt tcgcagccgt ggttactgcc atggcctgtc cattcgccgg
      721 atcactgccg gccgccggct tcgatgtcga gctgctggga aatgcttttg actgtccagc
      781 atctttgtca gaagtgggta gcgcagatac atccagcatc tgaagatgca tctgctgaag
      841 gttgatgtgt gtgaatccac tactcgaggc cggaagcgtt tgagaggtgc cggcaactgc
      901 aagtaatgct gttaatagga caaatgaaaa gactttgtaa ttcataacgc cccccgtaac
      961 ttccgtcctg atggccgcaa gctgatccaa tgggtgagcc gggcacgtca ctgcgaaatt
     1021 ctcgcagggc cggaagttca cctttgaagt tagttccgca gcagcgcgat gggtactggc
     1081 acaattgaca ggtttgctca gttagctatg agtctacgag caagggccgg gcgccctcct
     1141 ggtgctgata ttggcctgct tactgaatgc tcattctatc gatgacgtta cgataccggt
     1201 aataagtcga ggtgagttcc agcgcgcgct ggtgctgttg gaagctctgt accgaaccgg
     1261 agatgatgat gttaatgtca tcgacctcca ccgaaaggtc agatccggtc atcacgggat
     1321 cagaatcgaa cgctgtttcc aggttgctga ggatgcgtcc gtttatttct gtccggttct
     1381 gatgcatcgg ctggcgcggc tgcatctcct gagcactggt atctacaacc ggcgcgccgg
     1441 caagcgcgag attgagcaga atggttacca cgttgcccgc gggcggctgc tctcggtcct
     1501 ggctctggaa taagcaagaa cgatcagcat catcctcctc atctggtgac gtcggattga
     1561 tgcagttggc ggcgtccaaa ggggtcgagc gtgcaacatc ctgaattgaa aacgagagtt
     1621 ccgggaacgc gtctccatcg attaccgtgt tgcccctcac ccacatccgc ccctgaccgc
     1681 cgtgcactcc cagcgcagaa gcggactgct caagacggcc aaatacgaag gtcacttcgc
     1741 ggctcgcatg ggttttcgga ctgccgatgg aagcttcggg atcgggcccg ccatttcgcg
     1801 ccggtggtat atccactacc tgcagaacgg tcattcgtcc ctgagcctgc aacttgccgc
     1861 cactgagttc ctgcacgttg taagactcaa acgtgatgac ggaatggtaa ccagggccgc
     1921 tttgcgggcc caggcggaca gggttggcct tttccgattc atggatcttg aggctaatgt
     1981 gcgatgcact tatgtcattc ggattgagca gcagctctcc gctgacgctc gcttcaccga
     2041 ctctgaagga ttttgggttc tccgccgagc ccagaaaggc tgtggcctgg gacctctcag
     2101 ggatgacttg cagtccgact tggagggctg atgacagggc cgaggcggcc gcgatgaaca
     2161 gaagcagggc aagaaagttc gcattcttgc atctcaagag caaagcagag aatttcataa
     2221 catccccata actgcgttcc tactggacca tgccggaaag atgtagctcc agcacggcat
     2281 cttcagaggt actggttgag ttgatatatc cgcccagtcc cctctgaacc gggcagttct
     2341 gttctaacgg agtgataatc acgttcatct gttgggctgc cgtaaaccgg ctcttaccac
     2401 ctatcagacc ctcgtaggtc agcggcaagc cgtattcata ataggagcag gtattgctcg
     2461 cttcgaaata aggaactgtg agccgcacca tggcctgctg cggaacgatg ccgtcaacag
     2521 aagccgtggc ggacgcgtat tgcaggaatg ctcgttttcc cggaggaatg gcgatttcct
     2581 ggcctggcgg gatggtgcag gcgcccgttc ccgagcaact catgtgtgcg ctgaaaaact
     2641 gggggcctga gctcgcgaag ctcgtactga tcatttgggg aataaactgg aacccgacaa
     2701 acagaatcgc cagagtgccg aagatgtaat aaaaatattt ccgcatgacg ttcccctcgc
     2761 ttcgtcttcc gtggcccgta tcggcgagag cgcggcatta atttaagaag gcgcctgctg
     2821 cactccctgt ctaaagccta agatcctgcg gaattgtgag gaactggcaa aagtcacagc
     2881 acaggaaggg agccgcctaa actgtggaaa atcggaactt taggttctga ctgccagtca
     2941 attctccagg tcttcgataa aggtcacaga cctgtaaata ttgacagttg atccacagcc
     3001 gaggcggctt ctagcctgaa attgccggaa ctggcaacgg cggcgttcgc gctaccagga
     3061 cggacgcgga agaagatcaa aacaggatgc gagttcgtat ctctcgcatt ccctcatcaa
     3121 gccagtaata agctaaaaaa ggagtagaac catgccattc aagaatccca aggaagtctt
     3181 cgtaaagctg ctgaccgatg tccgtgagag cagcgagcgt atggtgaaat ttttcaacga
     3241 gatcactccg ctcgtgcatg aaccggagat caagcaggca ctggaggcgc gggcattcgt
     3301 gtataacaac atgatcgtca cgctcgacca gtgcttcaag ctcatcggcg agcagccggt
     3361 gaagctcagt gggaaactcc gcgagactct cattgagaac ttccgcgagg agctttctga
     3421 gatcgaatcc cccgtggcca agaaactgtt tatcctgacg aaactcagcc atgtgatcca
     3481 cctccggatc ggcgagttgg tggctctgac cgcggctgcg gacatcaccg gcaactatgc
     3541 cgtgggtgtg ttgctggaga gcgtgctggc tgagcagctg gcgttcgtag agcgcaaccg
     3601 tcgtttcctc aggaacatga tcgagaccaa aatcgcggag aaggtggctg cctgaagagg
     3661 ctgagctacg ctccgcaagt gtgctgcccc gaacttccat aatcgaattc ggggcagctt
     3721 ttttgtggga ctttgttacg accgttgaat gatggcgaaa ggtgccatga gttacagatc
     3781 gcagctcacg ccgagggcat tcacacgctc ccggctgact tcgcggacac ccccaccttt
     3841 caattctttg atgctatgga catattcaca tccaccatat cctaccgaga ggggagccct
     3901 ggtagtcact tcagagcgaa caagctgagg ctgtccttct gaccaccggt aggtgttcct
     3961 ggtgaagcaa acgccgttgc agccctggta ttcgtacgac tggagggtcc tggtggaggg
     4021 atcaggggct atgttggcga cacccgacag ctgattgttg aggacgaagc gctgctgcct
     4081 ggcgtcaaac aaccaaacgc agtatttggc gttgccgttc tcagaacttg tctgtaaggc
     4141 caggtcgtag taattgtcaa agttgaaatc cgccgcgctc agggaaccca ccggctcgcg
     4201 tctgggtact ggggcgttag tacacaggtt caatgtctga atcaattttc cgttct
//
LOCUS       DASQYP010000131         3754 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_279890, whole genome shotgun sequence.
ACCESSION   DASQYP010000131 DASQYP010000000
VERSION     DASQYP010000131.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 3754)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3754)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3754
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_279890"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1124
                     /locus_tag="VE783_04160"
     CDS             <1..1124
                     /locus_tag="VE783_04160"
                     /inference="COORDINATES: protein motif:HMM:NF013618.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="transglycosylase SLT domain-containing protein"
                     /protein_id="HYX52619.1"
                     /translation="REEGVPQDLIYLAQAESGFKPLALSKARARGMWQFMASRGAGYG
                     LHRSWWVDDRQDPEKATRAAARHLKDLYNQFGDWYLAMAAYNSGPGNVQQAVKRTGYA
                     DFWELYRRDVLPAETKNYVPIILAMTIISKNPARYGLENVQPAAKLDYDVVKINYPVD
                     LRLVAECVDVSLDQLVELNPSLLRRTTPKDQSFDLHLPRGSTEKYQSAIASIPEDKRV
                     QWRYHKVEQGETLSAIARKYRTTDRAIAQVNNLEGNQLKTDVKLIIPVSAAAAGTGKI
                     SYSRYPTRYKVHTGDTVLSVAEDFGVPPERLRRWNKLKGNDLRHGRVILVYKPLAPGE
                     ADKAPVRHGSAKKRGKTVSKRATKKASTTSSGESVSASR"
     gene            1256..1711
                     /locus_tag="VE783_04165"
     CDS             1256..1711
                     /locus_tag="VE783_04165"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52620.1"
                     /translation="MSFYDETLRARHEDDMDDDYGDDGGFGGGSMEEDFDEEEEESIG
                     AEAAETSGGSMSSSGGDESSEGGESSGGGSRSSGTRGGGGAKKKSAGKKKAAKKKAPA
                     KKKAAGKKKSAKKAPAKKKATKKKSSSTKKSSKKKGSKKKGSKKKSRRR"
     gene            complement(1855..3126)
                     /locus_tag="VE783_04170"
     CDS             complement(1855..3126)
                     /locus_tag="VE783_04170"
                     /EC_number="1.4.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012434.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Glu/Leu/Phe/Val dehydrogenase"
                     /protein_id="HYX52621.1"
                     /translation="MKTVSLEQELNPWEAQAARFDFAAQKLNLDDGLWKILRYPNREI
                     IVHIPVAMDDGRLEVFTGFRVQHSIARGPAKGGVRYSPEVTLDEVRALASWMTWKCAV
                     VNIPFGGAKGGVIVDPKKLTMSELERLTRRYTAELIEFLGPEKDVPAPDMNTNEQTMA
                     WMMDTYSMHMRQTVTAVVTGKPINIGGSRGRREATGRGVMINCDEALKKFNLRREDTR
                     VIVQGFGNVGSNAAKLMSDAGYKIIGIAEYNGGLYNPKGIDIDALLEFKDRNTSKGIV
                     GFSGAEAHDPKELLITTCDILIPAATENVITSQNASDIKAKIICEGANGPTTAAADEI
                     LADKKVFVIPDILANAGGVTASYFEWVQDRQGYFWKESAVNEQLEFILREAFEDVVHF
                     SDTHKVNNRIAAYMLAISRVAHTIKQRGIYA"
     gene            complement(3276..>3754)
                     /locus_tag="VE783_04175"
     CDS             complement(3276..>3754)
                     /locus_tag="VE783_04175"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52622.1"
                     /translation="IRVEKISLSMKSHARLALTVAVFAVTIAAVGFAFDRVLIREGVA
                     RAGVLFLSNLLTGLVASALFFQYKLRSEERQRLLRDRVKKLAEMNHHVRNALQVVAFY
                     QYQTPDPEAARLIQESIQRIEWTLQEVLPRGWELDEDLSPPRRKAPVAAKVGNEDL"
BASE COUNT          876 a          997 c         1101 g          780 t
ORIGIN      
        1 tccgcgaaga aggagtgccg caagacctta tttacttggc gcaggcggag tcaggattca
       61 agccccttgc cctttcaaag gcccgggccc gaggaatgtg gcagtttatg gcaagccgtg
      121 gcgcaggata tggtttgcac cgcagctggt gggtggatga tcgccaggat ccggagaaag
      181 ccacgcgagc cgcggcacgt cacttgaaag acctttataa ccagtttggc gactggtatc
      241 tggccatggc agcctacaac tccggccccg gcaatgtgca gcaggcggtg aagcgtacgg
      301 gttatgccga tttctgggag ctttacagac gcgatgtgct cccggcggag accaagaact
      361 atgtcccgat tatcctggcg atgacgatca tctccaagaa cccggctcgc tatggattgg
      421 agaacgtgca gcccgcggcg aaactggatt atgacgtagt gaaaattaac tatcctgtgg
      481 acctgcgact ggtagcggag tgtgtggatg tctcgctcga tcaattagta gagctgaatc
      541 ccagtcttct gcggcgcacg actcctaaag atcaaagctt tgaccttcac ctgcctaggg
      601 gaagcacaga aaagtatcag tctgctatcg cctccatccc ggaagataag cgcgtgcagt
      661 ggcgttatca caaggtagag cagggagaga cactgagcgc gatcgcacga aaatatcgca
      721 caactgaccg agcgattgcg caggtaaaca atctggaagg gaatcagttg aaaacggatg
      781 tgaagctaat catcccagtg agcgctgcgg cggcaggtac gggaaagatc agttattcgc
      841 gttatcctac gcgatacaaa gttcacaccg gtgacacggt actttccgtg gcggaagact
      901 tcggcgtgcc gccggaacgg ctgaggcggt ggaacaaatt gaaaggaaac gacttacgcc
      961 acgggcgagt catcttggtt tacaagccgc tggctccagg cgaagcggac aaggcgcctg
     1021 tacggcatgg ctcggcaaag aagcgtggaa agactgtaag caaacgcgcc acgaaaaaag
     1081 cttccacaac aagctccgga gaaagcgtca gcgcatcgcg ttgaaacttg attattcttg
     1141 cgccaagttg cacactgtgg tgcgcgggtt gacattcgct tcattcgaat tgttataatc
     1201 cgcgccggtt attatcggca gcgtgcacag gcggccctaa ttttctggag gaactatgag
     1261 cttttacgac gagaccctca gagcaaggca tgaggacgat atggacgacg attacggcga
     1321 tgatggtggc ttcggtggcg gttccatgga agaagatttt gacgaagaag aggaagaatc
     1381 gatcggcgcc gaagcagcgg aaaccagtgg cggctcaatg agcagcagcg gtggcgatga
     1441 aagcagcgaa ggtggcgaat ccagcggcgg cggatcgcgt tcgtcgggaa cccgcggagg
     1501 cgggggggcg aagaagaaat cagcaggaaa gaaaaaggct gccaagaaga aagcgccagc
     1561 taaaaagaag gccgctggca agaaaaagag cgctaagaag gcccccgcga aaaagaaagc
     1621 aaccaaaaag aagagcagca gcacgaagaa gagttccaag aaaaagggtt ccaagaaaaa
     1681 gggttccaag aaaaagagcc gtcgtcgtta aagctctctg aaaattcccc aaaaactgaa
     1741 gggccgcggc ttccaccgcg gccttgctgt ttcgtagcac cccgctgggg tagctcctgc
     1801 gagcaatgaa aaggcagccc gaaggctgcc ttggttcagg gagccattgg ccgtttacgc
     1861 gtaaatgccg cgctgcttga tcgtgtgggc cacacggctg attgccagca tgtaagccgc
     1921 gatccggttg ttgaccttgt gcgtgtcaga gaaatgcaca acgtcctcga aggcctcgcg
     1981 cagaatgaat tcgagctgct cgttcactgc ggattccttc cagaagtatc cctggcggtc
     2041 ctgcacccac tcaaagtagg aggcggtgac accgccggcg ttggcaagaa tatctggaat
     2101 gacgaagacc ttcttgtccg ccaggatttc gtccgccgcc gcggtagtcg ggccgttggc
     2161 gccctcgcag atgatttttg ctttaatgtc tgacgcgttc tggctggtga tgacgttttc
     2221 cgttgcggcg gggatcagaa tgtcgcaggt ggtgatcagg agttcttttg gatcgtgagc
     2281 ttccgctccc gaaaacccga cgatgccctt gctggtattg cggtctttga attccagaag
     2341 agcgtcgata tcgatgcctt tagggttgta gagcccgccg ttgtactcgg cgattccgat
     2401 gatcttataa ccggcatcgg acatgagctt ggccgcgttt gagccgacgt tgccaaagcc
     2461 ctgtacgatc acgcgtgtgt cttcgcggcg caggttgaac ttcttgaggg cttcatcgca
     2521 gttgatcatc acgccgcgcc cggtggcttc gcggcggcca cgcgacccgc caatgttgat
     2581 cggcttgcct gtgaccacgg cggtcaccgt ctgcctcatg tgcatggaat aggtatccat
     2641 catccacgcc atggtctgct cattcgtatt catgtcaggg gcgggcacgt ccttttccgg
     2701 gcccagaaat tcgatcaact ccgcggtata gcggcgggta aggcgctcga gctctgacat
     2761 ggtgagcttt tttgggtcaa cgatgacgcc acccttggct ccgccgaacg gtatgttcac
     2821 cacggcgcat ttccatgtca tccagctggc cagggcccgg acttcatcca gcgtgacctc
     2881 cggcgagtag cgtaccccac cttttgccgg tccacgagct atggaatgct gcacgcggaa
     2941 tccggtgaac acttccagcc tgccatcgtc catggcgacc ggaatatgta cgatgatttc
     3001 ccggttcgga tagcgcagga tcttccacag gccgtcatcc agattcagtt tctgggcggc
     3061 gaaatcaaag cgcgctgcct gcgcctccca cgggttaagt tcttgttcaa gcgatactgt
     3121 tttcatgcaa tctccagcgg aaaaggacaa acggacaagt atagttatgg ccggggaggt
     3181 ttatcaaata aggagaacaa gacctgaaca ctgaggtgcg taccggcggc cacgtctttt
     3241 gatgcagaaa gcgcctgcta tcgttccttg cggaattata aatcttcgtt tccgactttc
     3301 gccgccacgg gcgcctttcg ccggggcgga gataagtcct catccaactc ccatccgcgc
     3361 ggcaggacct cctgtagagt ccactcgatc cgttggatgg attcctgaat gagcctcgcc
     3421 gcctccggat caggcgtctg gtactggtag aacgccacca cctgtagcgc atttcgaaca
     3481 tggtgattca tttccgccag cttcttcact cggtccctga gcagtcgctg tctttcctct
     3541 gaccgcagct tgtattggaa gaagagcgcg cttgccacca gtccggtaag caagttggaa
     3601 agaaacagca cgcctgcgcg ggccaccccc tcgcgaatca gaacgcggtc aaaggcgaac
     3661 cccacagcag caatggtcac tgcgaatact gcgacggtga gagcaagcct ggcgtgagat
     3721 ttcatggata gtgaaatttt ttcgacccgt atag
//
LOCUS       DASQYP010000132         3119 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_47181, whole genome shotgun sequence.
ACCESSION   DASQYP010000132 DASQYP010000000
VERSION     DASQYP010000132.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 3119)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3119)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3119
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_47181"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(287..1936)
                     /locus_tag="VE783_04180"
     CDS             complement(287..1936)
                     /locus_tag="VE783_04180"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52623.1"
                     /translation="MENPKTLVVFVPGLRVGVKSAEPLLGKLLKEPELLGADLFTWDH
                     HAGYLSTKHPETLGLGLAAAIEGKWEDAKLHGPAYQRIILIGHSFGAVLIRHAYLVGL
                     GSSLRKLAPKEWANAVSRIVLFAGINRGLFPPEPAGTKKAPYMVRRWIGRRLIERVSQ
                     IPLVHFLGEDLLAGSDFVTNLRLWWIRRFDAMGDRRPVVVQLVGNDDGIVRQSDSLDI
                     EQDRSGNQIVIDGADHATIICITDKQGKLLEGRYALIHKAVLGDFPETPSPVPLEEQQ
                     RPVVFVVHGIRAGNGGWVDQAAKQIKALVSNAEIVRPTYWYFSALDFLLPLSRKRKIR
                     WFKDTYSYYLARSPRAEFHFLGHSNGTYLLGQSLLRLSGMQFNRVVLAGSVLPKDFEW
                     RTVVQRNQVTRIWNHRASADVPVAILCNAMRGLRMQDVGTGGFDGFVDLPQIIDCHFH
                     PGGHGAALEKQPLSNLALQVAGAPSPPVCCPLAEKPASWFRRASAMAVLVPAVLLLLL
                     GWAAWATGHVLAGHWGLTLVDARVLAGVVWLAVVAFVLKFL"
     gene            2255..2569
                     /locus_tag="VE783_04185"
     CDS             2255..2569
                     /locus_tag="VE783_04185"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52624.1"
                     /translation="MATHKRTRPRKKHTTRTTRTTHPSSKNSQFLRFPEVKGKVVDRV
                     EIGPTVEAITIIFEDKTVLSFDIESTLTVFPEFSDWKTGNARTLKRWPALHSGLQTVK
                     WM"
BASE COUNT          716 a          889 c          907 g          607 t
ORIGIN      
        1 agagcagaag cagcggacgg aggagaccac ggacattacg cgggcggcgt gagagctaac
       61 tgcggcaggc ggggaaaacc caattgccgc agattcacgc agaagaacgc tgatgtagcc
      121 aggctgctag cgactagctg ctagcttgaa cctggctgga aacaacagca gcccttgtct
      181 aaagtccgcg acttcgcccg ctacccacat tgcgcagctg atccttgttc aagctgcatt
      241 catgagtccg ttgacgcagc ctgaaactaa actaccggtg cgcgcttcac aggaatttca
      301 gaacgaacgc taccaccgcc agccatacga ctcccgcgag aacacgcgcg tcgacgaggg
      361 taaggcccca atgccccgcg agcacgtggc cggtggccca ggcagcccat cccagaagca
      421 aaagcagtac ggcgggaacc agcactgcca ttgcagaggc ccttcggaac caggaagcag
      481 gcttttccgc caaggggcag cagacgggtg gagatggcgc gccagcgacc tgaagggcga
      541 ggttggaaag aggttgtttc tccagcgcgg cgccatggcc accgggatga aagtggcagt
      601 caatgatctg ggggagatcg acaaagccat caaagccgcc agtgccaaca tcttgcatgc
      661 gcagcccgcg catggcattg cacaagatgg ccaccggaac gtcagcgctt gcgcgatggt
      721 tccagatcct ggtcacctgg tttctctgaa cgactgttcg ccactcgaag tctttgggaa
      781 gaacgctgcc cgcgagcaca acgcggttga actgcattcc ggaaaggcgc agcaaggact
      841 ggcccagcag ataggtccca ttgctgtggc caaggaagtg gaactcagcg cgagggctgc
      901 gggcgagata gtagctgtac gtgtccttga accagcggat tttccgtttg cgcgaaagcg
      961 ggagcagaaa atcgagagcg gagaaatacc agtaggtggg ccttacgatt tcggcattgc
     1021 tcacaagggc ttttatctgc tttgccgcct ggtcaaccca gccaccattg ccggcccgga
     1081 tgccgtgcac gacgaagaca accggccttt gctgctcttc aagcggtacg ggacttggcg
     1141 tctccgggaa gtcgcccagc acagctttgt gaatcagggc gtagcgccct tcgagcaact
     1201 ttccctgctt gtcagtgatg cagatgatgg tggcgtgatc cgcgccgtcg atcacgatct
     1261 gattgccgga gcggtcctgt tcaatatcga gactgtcaga ctgccttacg atgccgtcgt
     1321 cattgccaac gagctggacg acaaccggcc tgcgatctcc catggcatca aacctgcgaa
     1381 tccaccagag ccgcaaattg gtgacgaaat cagagccggc gagcaggtcc tcgcccagga
     1441 aatgaaccag cggaatctga gagacccttt caatgaggcg cctgccaatc cagcgccgga
     1501 ccatgtaggg agccttcttt gtaccagcag gctccggggg gaagaggcca cggttaatcc
     1561 cggcgaacag cacgatgcgg gagacagcgt tcgcccactc ctttggcgcg agcttcctga
     1621 gagagctgcc gaggccaacc aggtaggcat gcctgatcag caccgcgccg aaactgtggc
     1681 cgatgagaat gatccgctgg taggcagggc cgtgaagctt tgcgtcctcc catttaccct
     1741 caatggcagc ggccagcccc aagccgagag tttcaggatg ttttgtgctc aggtagccgg
     1801 cgtggtggtc ccacgtgaag aggtcagctc ccaggagttc aggttctttt agcagctttc
     1861 ccagcagagg ctcggcgctc ttaaccccca ccctaagacc gggaacaaat acgacaagag
     1921 tctttgggtt ttccataaca aatgaataac gttagctagc acaataatcc ttttggcgat
     1981 gcaggggaag cctgcgattt cgctgccggc gcgagccttc ggcgagcgtg caagtgacat
     2041 ccagggcaga gacgcaaaat gctgttgcgg gcgtggtggg attgcgagcg gtggaggcct
     2101 cttcacgcgc ggcgccggcg cgagaagaaa atttcaggct tcgtgctttt ttcgttgcac
     2161 tcggtcgatg acaggcgtat aaaaacagcg ggacgcgccc gtgttacaag cacgaacgcg
     2221 cccctaacca aagcaaccta gctaggaggc cgcagtggct acccacaagc gtacacgtcc
     2281 gcgcaaaaag cacacaacca gaacaacccg cacgacccac ccaagcagca agaacagcca
     2341 gttcctccgg ttccctgaag tcaaaggcaa ggtggtggat cgcgtggaga tcggccccac
     2401 ggtggaggcg atcaccatta tttttgagga taagaccgta ctcagttttg acattgagtc
     2461 gacactgacc gtatttccgg aattttccga ctggaagaca ggcaacgccc gcaccctgaa
     2521 gcgatggccg gccctgcata gtggcctgca aacggtgaag tggatgtaaa acggacccgc
     2581 cgagaggcgg gtttttgatt ggcgtctcgc gggttggagc tctctgtgag aggccgcgaa
     2641 aaactcggag ataacggccc gtctgtcccc tggattcccc ctggattccc gttccccggc
     2701 acaggacaat cgagttgaac gcgccaacct tctttggcat aattgaataa cttcaaagga
     2761 gcggatattg aatgaccgac agcgttcctt tcccggaatg ctgatcgatt gtttaatacc
     2821 cattgtccat ttcatcctct atttccggaa gccaagtaaa tatggcctta cttggcatct
     2881 tgggacaggc gcattccggg tggaagtcca ccagcttcgc gtctgccact ctctgcgtct
     2941 ctgccggatg agacgaggag tttggttcgg caaacacaat tcgggaacga cctaacagca
     3001 cacagatatc cggctaatac acgtgtgccg gagggtttgt gttccaggtc tctgcgttgt
     3061 tgttcacggc gctcatctca gcgctggtat ctctcctcat atatttcctg ttcgcaaag
//
LOCUS       DASQYP010000133         6688 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_132528, whole genome shotgun sequence.
ACCESSION   DASQYP010000133 DASQYP010000000
VERSION     DASQYP010000133.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 6688)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6688)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6688
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_132528"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..928
                     /locus_tag="VE783_04190"
     CDS             <1..928
                     /locus_tag="VE783_04190"
                     /inference="COORDINATES: protein motif:HMM:NF024896.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HYX52625.1"
                     /translation="DIDAAGQQAIDAARLWVIDAPPEQAMEAARQQPVYSARLQDVEA
                     AVQSGSQATGGGYPDFFLLTDADIEHSGAELRKLVALAQAERVDLASLMVKLYCRSFA
                     ERMLIPAFVFFFFLLYPPKWIRSAKRKVAGAAGGCILVRPEALERAGGIEAVRREVID
                     DCALAQAVKKSGGRVWLGLTGETRSIRPYDSFAEIGRMISRSAFNQLRHSALLLAFSL
                     FGMLLVYVAPVVLVASGALLPAALGASAWLVMSACYLPMVRYYGLSAVWAFTLPATAV
                     FYMGATFHSAMKYWLGKGGEWKGRVQDPSLRD"
     gene            1105..2247
                     /locus_tag="VE783_04195"
     CDS             1105..2247
                     /locus_tag="VE783_04195"
                     /inference="COORDINATES: protein motif:HMM:NF014346.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HYX52626.1"
                     /translation="MRKPGALIFLCYMACALCSVTAASAQNAPAAGKTAEQQFKNIQV
                     LKGAPAEQVIPTMQYFNASLGVECDFCHVRQQTLEPAKDDKKEKLTARKMIEMTESIN
                     RANFEGKPEVGCGTCHTGKTHPSAASSLFDVNNPAAHEANRHDQAHQELPSAEQIEAA
                     YEKAIGGHDAIQKLTTRSAKATVKTFQGQTFQMESLAKAPDLAVTDSKLPNGQQREQG
                     FDGKTAWTKGNRGVNEAAGPELASIRISARFDRDLMPLAAFVNTRVVGMDKVDGKDCY
                     VVRGVHADNTFSERLYFDKESGLLLRRVFQQRTLFGSLTDATDYSDYKEVNGVKVAFT
                     TRRTNAETVLTRTLDSVAFNKPLDAGRFAVPAATEAKPAGAEGKKD"
     gene            complement(2244..3065)
                     /locus_tag="VE783_04200"
     CDS             complement(2244..3065)
                     /locus_tag="VE783_04200"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52627.1"
                     /translation="MYALWLFGLLLHFVACWAVVRKGYFTRWKAFSYYLFVMTAEAAC
                     MLPVSVWGTEQLYERAYTVASIVEWVLLSLVVLEIMVKLLEPFEALPGKAVARFSFWA
                     IVGISGAVALSVFFPAHQGQLSTNISLTVERTIFLAYAALLWAMIFQAKSLGISWISA
                     VAEIAIAFVLYLTVQATERFVIGAYYTNHGVINIATGVGQFAYLVALGSWIWTILHRD
                     PVSPQPSEDVLARLSSLTEHQHELVPRERIFAAVGVRINRAEPQPEEDTIEPVVH"
     gene            complement(3492..4004)
                     /locus_tag="VE783_04205"
     CDS             complement(3492..4004)
                     /locus_tag="VE783_04205"
                     /inference="COORDINATES: protein motif:HMM:NF022479.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2721 domain-containing protein"
                     /protein_id="HYX52628.1"
                     /translation="MHTDGVLSSVTDNPFAVLTLIGAPAVFTNASSVLTLGTGNRLAR
                     VVDRTRVIAREIHSASAGDESTSLWIGHLGRLEHRGALLLRAMSFFYGAIGAFAAASL
                     VSILGASLAASNFGMSFTVFALISFIAGAIGFVALVVGCAFLVGETRLALASMFDEAR
                     LARSRSPKST"
     gene            complement(4056..4520)
                     /locus_tag="VE783_04210"
     CDS             complement(4056..4520)
                     /locus_tag="VE783_04210"
                     /inference="COORDINATES: protein motif:HMM:NF040444.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6496 domain-containing protein"
                     /protein_id="HYX52629.1"
                     /translation="MPEKKTLERARRDKVEGKSASTQAGEFVREEMEHIRSGKHGARN
                     TKQAIAIGLSKARRAGVDLKPPKKGKAKESTRKSAERDYRKGHSAKKKSTSSKRSSSR
                     LKALKREPRSAASHSALSRQAKSAARARRKRGSVTAGARRSSGARASQRKAA"
     gene            complement(4580..6067)
                     /locus_tag="VE783_04215"
     CDS             complement(4580..6067)
                     /locus_tag="VE783_04215"
                     /inference="COORDINATES: protein motif:HMM:NF013696.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /protein_id="HYX52630.1"
                     /translation="MRRGLLVAALAVVILAVVVGQTNANDQSVQAVRSYVAAHQQEIL
                     KEFTEFLALPNIASNLPDIQKNADALVKMAERRGLKTQLLTVQNAPPVVLAEAPAEPG
                     RKTVFFYAHYDGQPVQRDQWKQDPWQPTLVKAADERIYARSASDDKAAVLGLLVAYDA
                     LRSSGAPPSMNIKFFFEGEEEAGSPHLDQILKRYADRLNADLWVICDGPIYQNGQPLL
                     VFGSRGVVTAALTTFGPNRPLHSGHYGNWAPNPIVELAQLISRLRNTEGEILIPHYYD
                     PVRPLTPGEKKALQELPNLDAQLKQEFQLGRSEGTQPVSEEIMKPSINLDRIEGGGYG
                     PNPANAVPSAATAYIDLRMVPNQTPEIVRQQVEAYLTQLGYFLVHQPPTPEERRSHSR
                     VLQISWGSGYPPQRTDIDAPVSQAFVQAMRTATGNSLVIMPTLGGSTPAFMFEQQFRK
                     PVIGLPIANFDNNQHAANESIRLDYLYNGLTSYAAVFISLGKYWH"
     gene            complement(6067..>6688)
                     /locus_tag="VE783_04220"
     CDS             complement(6067..>6688)
                     /locus_tag="VE783_04220"
                     /inference="COORDINATES: protein motif:HMM:NF012546.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="prolyl oligopeptidase family serine peptidase"
                     /protein_id="HYX52631.1"
                     /translation="ASIINEPYMNAANGRIGTLTDDDLTDAVQWAIKQGIADPKRIAI
                     MGGSFGGYSTLRGLTLHPELYACGVDIVGPADLATLMNSIPDYWKPVKKRWLRRIGDV
                     TTDAELNKKLSPLYHASNIRVPLLIGHGAHDPRVKLVQSETIVDTIRKQGGKVTYVVY
                     SDEGHGFTRPENNLDFDGRMEEFLHGCLGGRFEPWQKVPGSTAEVK"
BASE COUNT         1387 a         1899 c         2031 g         1371 t
ORIGIN      
        1 cgacattgac gccgcgggcc agcaggctat cgacgccgcg cgactgtggg tgatcgacgc
       61 gccgccggag caggcaatgg aagcggcacg tcagcaaccg gtttactccg ccaggttgca
      121 ggacgtggaa gccgccgttc agtcgggatc gcaagcgaca ggcggaggct atccggattt
      181 tttcctgctt acggatgccg acatcgaaca cagcggggca gaactgagaa agctggtggc
      241 gctggcgcag gctgagcgcg ttgacctggc atcactgatg gtgaagcttt actgccggag
      301 ctttgcggag cggatgctga tcccggcgtt tgtgttcttc ttcttcctgc tgtatccgcc
      361 gaagtggatc cgcagcgcga agcgaaaagt ggcgggcgcg gccggaggct gcatcctggt
      421 gaggccggag gcgctggagc gggccggggg gattgaggcg gtgcggcggg aagtgattga
      481 cgattgcgcg ctggcgcagg cggtgaagaa gagcggcggc cgcgtgtggc ttggcctgac
      541 aggcgagacg cgaagcatcc gcccctatga ttcgttcgcg gagattgggc ggatgatttc
      601 gcgcagcgcc ttcaaccaac tccggcattc ggcgctgctg ctggcattct ccctgtttgg
      661 gatgctgctg gtgtatgtgg ccccggtcgt gcttgtggcg agtggagcgt tgctgccggc
      721 ggcgctgggc gcgtcggcat ggctggtgat gagcgcgtgc tatctgccga tggtccgtta
      781 ttacgggcta tcggcagtgt gggcctttac cctgccggcg acggcggtct tttatatggg
      841 tgcaacgttt cactccgcaa tgaagtactg gctgggcaaa ggcggcgagt ggaaaggacg
      901 ggtgcaggac ccctcgttga gggattaaga gcgttttgcg ctcgacaatg ccgagtgctt
      961 tacaaaactg tgcaagcgcg agtggccggc acgcaggaac gcattgctat aatgcagagc
     1021 tttccttaac aaaaaccgaa aagctttctt taacaaagac tgaaaagctt tttttcgcaa
     1081 aaatcccagt gaggtgactt cagtttgcgc aaacccggtg ccctgatctt tctctgctac
     1141 atggcctgtg ctctatgttc cgtgacggcc gcttctgccc agaacgcgcc tgcggcgggg
     1201 aaaaccgctg aacagcagtt taagaacatt caggtgctga agggcgcgcc ggccgagcag
     1261 gtgattccga cgatgcagta cttcaacgcg tcactgggcg tggaatgcga tttttgccat
     1321 gtccgccagc agacgctgga gccggcgaag gacgataaga aggaaaagct cacggcgcgc
     1381 aaaatgatcg agatgaccga aagcatcaat cgcgccaact ttgaaggcaa gccggaagtg
     1441 ggctgcggga cgtgccacac gggcaagacg catccttcgg cggcgtcgtc actttttgat
     1501 gtgaacaatc ctgcggcgca cgaggcgaac cggcatgatc aggcgcacca ggaactgccg
     1561 tcggcggagc agattgaagc ggcgtacgaa aaagctattg gcgggcatga cgccatccag
     1621 aagctaacga cgcgctcagc caaggcgacg gtgaagacct ttcagggaca gacgtttcag
     1681 atggagagtt tggccaaggc gccggacctg gctgtgaccg attcgaagct gcccaatggg
     1741 caacaacggg agcagggctt tgatggaaaa accgcatgga caaaaggcaa tcgcggcgtg
     1801 aatgaagcag cagggccgga gctggcgagc attcgcattt cagcgcgctt tgatcgcgac
     1861 ctgatgccac tggccgcgtt cgtcaacacc cgcgtggtcg ggatggacaa ggtcgatggc
     1921 aaagattgtt atgtggtgcg cggcgtgcac gccgacaaca ccttcagcga acggctctac
     1981 ttcgataaag agtcaggcct gctgctgcgc cgcgtgttcc agcagcggac gctgtttggc
     2041 tcgctgacgg atgccactga ttacagtgac tataaggaag tgaatggcgt gaaggtggcg
     2101 tttacaacgc gtcggacgaa cgctgagacc gtgctgacac gaactctgga ttcagtggcg
     2161 ttcaacaagc cgctggatgc cgggcggttt gctgtacccg cagcgacgga agcgaagccc
     2221 gccggcgcag aagggaaaaa agattagtgc accacgggtt caatggtgtc ttcttccggc
     2281 tgaggttccg cgcggttgat ccgcacgccg acagcagcga aaatgcgttc gcgcggcacg
     2341 agttcgtgct ggtgttccgt gagcgaagat agccgcgcaa gcacgtcttc tgagggctgg
     2401 ggcgatacgg ggtcgcggtg caggatggtc caaatccaac tgccgagcgc gacgagatag
     2461 gcaaactgtc ctacaccggt ggcgatgttg atgacgccgt ggttggtgta gtaggcgccg
     2521 ataacaaacc gctctgtggc ttggactgtc aggtagagaa cgaaggcaat cgcgatctca
     2581 gccacggcgg atatccagga gatgcctagc gatttggcct ggaagatcat ggcccacaaa
     2641 agagcggcat aggccagaaa aattgttctt tccactgtaa gagagatgtt ggtggagagt
     2701 tgcccctggt gcgcagggaa aaacacagaa agagccacgg cgccggaaat gccgacgata
     2761 gcccagaagc tgaaccgggc gactgctttg ccgggaagcg cttcgaatgg ctccagcagc
     2821 ttcaccatga tttccagcac caccaggctc aacaacaccc attccacgat ggaggcaact
     2881 gtgtaggccc gctcgtataa ctgctcagta ccccacaccg aaacgggcag catgcaagct
     2941 gcctcggcgg tcatgacaaa gaggtaatag ctgaatgcct tccatcgggt gaagtagcct
     3001 ttgcgcacca cggcccagca cgccacaaaa tgcagtaaga ggccgaacag ccaaagggcg
     3061 tacacgcctg ataaaaggtg ctccacttcc actccatacc gcggtggcgg cgattatcga
     3121 tttggcggct tcacgggagg cacaaggctg tcccccgtag ggcccttggg caaagttccc
     3181 aaccagatca gcaactggat gatgatatcc atacggaaaa ccctctttga cgcgcggctg
     3241 aatacctgtc ttcacaccgc gcggaaatct gggctgccct ggctggtagt aaaaccgcaa
     3301 acgtgccgtt cagtgtagac cagctgggcg gcgcagtaca cctgaaacta ttattcttct
     3361 tgatacgtgg ctcggctata tcccctaagg acacctactt gagtcacaca ttacctaggt
     3421 aatcaccgga gcggtgaggg tcgatcccgc ttcttatctg tatgttgcgg aagcgttccc
     3481 agaagggcac cttaggtgga ttttggagag cggctgcggg caaggcgggc ttcgtcaaac
     3541 attgaggcca gggccagccg ggtttctccc accagaaagg cgcatcccac aaccagcgca
     3601 acaaacccga ttgcgccggc aatgaaactg atgagagcaa agactgtaaa agacatgccg
     3661 aagttggaag ccgccaggct tgcgccgagg atcgaaacca ggctcgcggc ggcaaatgcg
     3721 ccgatggcgc cgtagaagaa gctcatcgcc cgcagcagca gggctccgcg gtgctcaagc
     3781 cggccaaggt gtccgatcca gagtgaagta gactcatcgc cggcggaagc actgtggatt
     3841 tcgcgagcaa tcacccttgt tcgatccacc acccgcgcca gccggttgcc ggttcccagc
     3901 gtgagcactg aagatgcgtt ggtgaacacc gccggtgctc cgatgagtgt caaaacggca
     3961 aaaggattgt cagtcaccga actaagcaca ccgtcagtat gcaacaacag actgcttgat
     4021 gactatttgc tatcaaagaa cgcgcttgag gctgttcacg cagcctttct ctgcgatgcc
     4081 ctcgcgcctg agcttcggcg ggcgccggcg gtcactgagc cgcgctttct gcgcgctcgg
     4141 gctgcgctct ttgcctgtcg cgaaagcgcg ctgtgtgaag ccgcggaccg cggttcacgc
     4201 tttagtgctt tcagccggga actggaacgc ttgcttgaag tgcttttctt cttcgcgctg
     4261 tggcccttgc ggtaatcgcg ctcagcggac ttgcgggtgc tctccttggc tttgcccttc
     4321 ttcggaggct tcaaatccac accggctcgc cgagcctttg agagaccaat cgcgatcgcc
     4381 tgtttggtat tgcgcgctcc gtgcttaccg ctacggatat gctccatctc ctcgcgaaca
     4441 aactcgcccg cctgtgtgct tgctgatttt ccttccactt tgtcgcgccg cgcgcgctca
     4501 agagtcttct tctccggcat gcctttcctc ccttgacgtt gggatgccag aaaaaccgat
     4561 tgaggattgc ctgtcgccct cagtgccagt acttgccaag gctgatgaac accgcggcgt
     4621 agctggtgag gccgttatac agataatcaa gacgaatgct ctcgttcgcg gcgtgctggt
     4681 tgttatcgaa gttcgcgatc ggcagtccga tcaccggctt tctgaactgc tgctcaaaca
     4741 taaatgccgg cgtgctgccg ccgagcgtgg gcatgattac cagagagttc cctgtcgccg
     4801 tgcgcattgc ctggacgaac gcctgcgaaa ccggcgcgtc aatatctgta cgctgtggag
     4861 gataacccga gccccagctt atctgcaaaa cacgcgaatg gctgcgccgc tcctccggcg
     4921 tgggcggctg atgaaccaga aaataaccga gttgtgtcag gtacgcctcc acctgctggc
     4981 gcacgatctc gggtgtctgg ttcggcacca tgcggagatc gatgtacgca gtcgctgcgg
     5041 agggcaccgc gtttgcggga ttcgggccgt atcctccgcc ttcgattcga tcaagattta
     5101 tcgagggctt catgatctct tccgagaccg gctgcgttcc ttcactgcgg ccgagctgaa
     5161 actcctgctt tagttgcgca tccaggttcg gcaactcctg aagcgccttc ttctctcctg
     5221 gcgtgagcgg tcgcaccgga tcgtaataat gaggaataag gatctcgcct tcagtgttcc
     5281 ttaagcgcga gatcagctgg gccagctcaa caatcggatt cggcgcccag ttgccgtaat
     5341 gacccgaatg cagtggtcga ttcggaccga aagtggtgag cgctgcagtg acgacgccgc
     5401 ggctgccgaa caccagcaat ggctgtccgt tctggtagat gggcccgtca caaatcaccc
     5461 acaggtccgc attcaaccga tcagcatagc gctttaggat ctgatccaga tggggcgacc
     5521 cggcttcttc ctcgccttcg aagaagaact tgatgttcat ggacggcggg gcaccagagg
     5581 atctcaatgc gtcatatgcg acaagaagcc cgagcactgc ggctttgtca tcgctcgctg
     5641 aacgggcata gatgcgctcg tccgcagctt tcaccagcgt cggctgccac gggtcctgct
     5701 tccactgatc gcgctgcacc ggctggccat cgtagtgggc gtaaaaaaac accgttttgc
     5761 ggcccggctc ggcgggagct tcagccagta ccaccggcgg tgcgttctgg acggttagaa
     5821 gctgtgtttt caggccccga cgctccgcca ttttaaccag cgcatcggca tttttctgaa
     5881 tatcgggtag attgctggca atgttcggaa gggccagaaa ctccgtgaac tctttcagga
     5941 tctcctgctg gtgcgcggcg acgtaacttc tcactgcctg cacgctctgg tcgttcgcat
     6001 tcgtctgccc aacaacaact gccagtatca cgactgccaa tgccgcgacc agcaagccgc
     6061 gtctcatcac ttcacctccg ctgtggagcc cgggactttc tgccagggtt cgaaccgtcc
     6121 gccgaggcac ccatgcagaa actcttccat gcgcccgtca aagtctagat tgttttccgg
     6181 acgggtgaag ccgtggcctt cgtcggaata gaccacatac gttaccttgc cgccctgctt
     6241 tcggatggtg tccacaatcg tctctgactg gacgagcttg acgcgtggat cgtgcgcgcc
     6301 atgcccgatc agcagcggaa cgcggatatt cgaagcatga taaagaggag acagcttttt
     6361 gtttagctcc gcgtccgttg ttacatcgcc gatacggcgc agccaacgct tcttcaccgg
     6421 cttccagtaa tcggggatgg agttcatcag cgtcgccagg tccgccgggc ccacaatatc
     6481 caccccgcag gcgtaaagtt ccggatgaag cgtaagcccg cgtagcgtgg agtacccgcc
     6541 gaacgatccg cccatgatcg cgatccgctt tgggtcggca atgccctgtt tgatcgccca
     6601 ctgcacggca tctgtaagat catcgtcggt cagggtcccg atgcggccat tcgccgcgtt
     6661 catatacggt tcgttgatga tggaggct
//
LOCUS       DASQYP010000134         8097 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_177743, whole genome shotgun sequence.
ACCESSION   DASQYP010000134 DASQYP010000000
VERSION     DASQYP010000134.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 8097)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8097)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8097
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_177743"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..3937)
                     /locus_tag="VE783_04225"
     CDS             complement(<1..3937)
                     /locus_tag="VE783_04225"
                     /inference="COORDINATES: protein motif:HMM:NF024824.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HYX52632.1"
                     /translation="MKRYSLSLVFLFSLSLAGLGAAQTFDINGSQPAQNQKKQSSKKG
                     GKQQSSGAPQEPSASSSGGIGWGSSIEVGRNARAVEEALKKGDTAAAMSYAQRVTQAA
                     PNDPRNWFLLGYASRLAGNNSLSLSAFDKGLQRAPNSVEGLSGKAQTYMRMGKADEAK
                     KLLLQVIAANPRRANDLAMAGELFMQSGDLRQATNLLERSEGIEPASHTELLLASAFM
                     KQKQPDRAKAFLDKALTRAPKNTDVYRAVGQYYREAHDYKKAIEYLNKAPRKTADVMS
                     ELGYTYELAGMKKESAAAYDKAAEMSPKSANVQLSAAAAQMRIGNLEKTRTYLARAEQ
                     IDPNYYRLHAIRGDLAKLERRDNDAVKEYLAALAAMPEGPAEGLLYPTQLRLNLIDTY
                     KALDDDRSANQQIAIAQQQLAGMQVQGPDRVEYLRLRAAIKGLGNDFGGAEADLKEAL
                     NLDPNNANVMLQYGSILWKAGRKADAQRMYATLLQHDENNRYALEAMGYLSRDMGDNK
                     AAERFFTRMAQAYPGDYVPYVALGDLYTNTKQYAKAEDSYEKAYKIAPTNPQIIVGGS
                     NAAIDAHQIDLAGKWVARATGTMKNDPRVMRENERYLFHKGRYLESARYGQQAVVKMP
                     KDRDAAVYLAYDLYNLGRYDDVLSLVSRYERVLPKEPNFPLLAGHVHRQNQLLDQAID
                     DFTRVVEKDPSLVAALVARGYVRNDMQDAQNAIADFQPALKANPNDGVARLGLAFSYL
                     QLHRSREALDEVGQAEKQMGDIGAVHLVRASAYRQMRVLDKAEKEFRAALKFSPDDLK
                     LHEALADTLYHARRYNQAIGEWNTALQLSPDDPYLYASIAAANAHMGRRDETFKYINA
                     AEKAGSDQAAVLLATGEALLELGDRSAANERFSRALDAPDANRVDVRLEFAKLFASEG
                     KFNDAKQEVSLAFAESRIGEASPVTTDNLVEAANIFLASHDFDLAERYFTKAKAMGAS
                     DDTVAIGLANTYIAEGKDRKAEAELSALGNLPDYQQNYDYQLAWANIYNQRHDTLGAI
                     KAFASADQLAAEDRTAERGMLQVSGQEGAEIYPNLFMQNNLSTGAIFEDATLYQMDTA
                     FFGTLARPRSSQETDLGSNFRYHLNGFAPITGFAGLRNYRGSISVPSSLAIVRRNTYD
                     TVLDVGTTPTLHWGDARFQLNPGIAYTVRRDSESPLEMNQNLFRQYLYLNSSPLFNWV
                     TMRGYAIHEAGPFTQQNLSSRDLGASLEFEVGRPWGRNSLITGYAVRDLLFHPLQREF
                     FTTGTWAGLQHKFGQNVSVTGLAKYIRSWRVQDGAFAIAQILVPGARFEY"
     gene            4278..6050
                     /locus_tag="VE783_04230"
     CDS             4278..6050
                     /locus_tag="VE783_04230"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52633.1"
                     /translation="MSSPSMAAGREVPMLGRTIPLSWIMLLALLVHGPLLLMQLPNAS
                     YDANFHKFFASHYAQHWFNPWNEKQFTGFSQTTYPPMEQQWLALISHVLGLDLSYMVV
                     QFIAILLLPIGVFRYARIWVDDRAASYAAIGSVLLGSLAFLVYDAGQLSTTWAAPLYL
                     IALGYFYDWTREAKVSALLKSLALTWAAASAHHVTLLFASVFFTVPVLITAIMDRNTE
                     GRDASTPGVISRAAVFAVLAVAGILAVLYPYFVSLYYNPIKQMPIPHQSRDNYFSDAF
                     HFFNYLIIPWGAMLLTLPYVFVKGLSERRLRPLFLGFWITMILALGGTTPLPRLMLGR
                     AFYVLTFERFSFWASIMALPIVGLLAVELIDRFGRKAVFTMGSLAALTVAAAVAWPTY
                     YALHEPPFSVQSVIEFLNRDGHDKFRYLTLGFGANKMDEVSTYGNASSVDGDYNSARL
                     LPEMTQYGAGQLTNAKYYGSNGMESLRAMLKHADHYGLKYIFVHDTFYEPLLAFAGWR
                     KAETYDRGNITLWVKDGIPPARPTEYGQKPTAMQGILWGTLPIGSSILALLLVLIFPD
                     ERRRLGEHIEFPSLTEEPVLREAR"
     gene            6050..7144
                     /locus_tag="VE783_04235"
     CDS             6050..7144
                     /locus_tag="VE783_04235"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52634.1"
                     /translation="MGRILAIIFALLTVALVAAGSVHKSSTATASSPEEAVQSLLANA
                     KGHNWDGAYSYVAKAGNVDLPNFQHDIQGKNGSLRTYSSIDSYQTRVLRQNDDEGLVR
                     TDVKYSTAVGPFYDTRDLRVVREGNVWKVVWPVQKEQNVPPQVIPVNYLRWDIIWRGS
                     NDDWGAQDVESPHVRILSMHASERDNTVIVLGEVVNEDTVPAFVSVGATLVGTNGQDM
                     AEETSFDKTSHVLLPKEVSPYRIDFPGVKLADVKSARMKPDSMLVPASADPVIGVLHQ
                     RIEQDAKGHTVLRGELLNESGQTVNIPHVLATFYDNSGQVIWVSDGYVDHALQPQVPE
                     AFAVDLRDELASQVHTYRVTVNQYSINRQE"
     gene            7148..8014
                     /locus_tag="VE783_04240"
     CDS             7148..8014
                     /locus_tag="VE783_04240"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52635.1"
                     /translation="MRRISFWIVVFVLCWVAADLAHGADLRVPQDATAGQSLTIGTGG
                     GDTLYLVGPGQVIKRKISGGGDVQIPGDELHNAGRWIAIVRGGANESQVFWVRPGKAE
                     NLNFLARPSRVPVNRPGVISGVAFVFDKYENLVLDPTQVKFSLSVGAAHAEHAATSSN
                     GVAWVTSSSAPKAGAAQFVASLPDAQVRRVIEQVASEPCYSKLRMKVVQRDKGKVVVE
                     TDPVVDCTGNAVPDGTIVTFTQTDPTGRSVVDARIKKGVARAQLPAEPNARISVASGV
                     VLGNEIRLGGGE"
BASE COUNT         1544 a         2418 c         2370 g         1765 t
ORIGIN      
        1 ggtattcaaa gcgcgcgccg gggacaagga tctgcgcaat tgcgaacgcc ccatcctgca
       61 cacgccagga acgaatgtac ttggccagac cggtgacgga cacgttctgc ccgaacttat
      121 gttgcaggcc ggcccaggtt ccggtggtga agaactctcg ttgcagcgga tggaataaca
      181 ggtcgcggac cgcgtagccg gtaatcagtg aatttcgtcc ccatggcctt ccgacttcga
      241 attccaggct ggcgcctaaa tcgcgcgaac tgagattctg ctgcgtaaat ggccccgcct
      301 catgaatggc gtagccgcgc atggtgaccc agttgaacag gggcgagcta ttcagataga
      361 ggtactgccg gaagagattt tgattcatct ccagcggcga ttccgaatcg cgacgcaccg
      421 tataggcaat gccgggattc agctggaagc gagcatcacc ccagtgcagg gtaggcgtgg
      481 tgcctacgtc aagcacggtg tcataagtat tgcggcgtac gattgccagg ctgctgggca
      541 ccgagatgga accacgatag tttcgcagtc ctgcaaagcc cgtaatcgga gcgaatccgt
      601 tcaagtgata acggaagttg ctgccgaggt cagtctcctg cgaagaacgc ggacgcgcca
      661 gcgttccgaa aaatgcggtg tccatctgat agagcgtggc atcttcaaag attgccccgg
      721 tgctcagatt gttctgcatg aacaggttgg gatagatctc ggcgccctcc tgtccggaga
      781 cctgtagcat gccgcgctcc gccgtgcgat cttccgccgc gagctggtca gcgctggcaa
      841 atgccttgat ggcgcccagg gtgtcatgcc gctggttgta aatattggcc caggcaagct
      901 ggtaatcgta gttctgttga tagtcgggca agttgcccag tgcgctcaac tcagcttcgg
      961 ctttgcggtc cttgccctcg gcgatgtagg tgttggccag cccaatggcg actgtgtcgt
     1021 ccgacgcgcc catcgcttta gccttggtaa agtaccgctc cgccaaatca aaatcgtgcg
     1081 aggcaaggaa gatgttcgcg gcctccacca gattgtcggt ggtgaccggc gaagcttcac
     1141 caatgcgcga ctctgcgaat gccaggctca cttcctgctt ggcatcattg aacttgcctt
     1201 cactggcgaa gagcttggca aattcaagcc gcacgtcaac gcggttggcg tccggagcgt
     1261 caagagcgcg tgagaagcgc tcattggccg cgctgcggtc gcccagttcc agcagggctt
     1321 caccggtggc caggagcacg gctgcctggt ccgagccggc tttctcggcc gcattgatgt
     1381 acttgaaagt ctcgtcgcga cggcccatgt gggcgttcgc cgcagcgatg ctggcgtaca
     1441 ggtaaggatc gtcaggggag agctgcagcg ctgtattcca ttcgccgatt gcctggttat
     1501 agcgacgcgc gtgatagagc gtgtcagcca gggcttcatg cagcttcaga tcatccggag
     1561 agaacttgag cgccgcgcga aattcttttt ccgccttgtc cagcacacgc atctgccggt
     1621 aggcgctggc ccggaccagg tgaacagcgc cgatatcccc catttgcttt tccgcttgcc
     1681 caacctcgtc cagggcctcg cgcgagcgat gcaactgcag ataggagaag gccaggccca
     1741 gccgggccac accgtcgttg ggattggctt tgagtgccgg ttggaaatcg gcaatcgcat
     1801 tctgtgcatc ctgcatgtcg ttgcggacat acccgcgtgc tacaagcgcg gctaccaggg
     1861 aggggtcctt ctcgacaaca cgagtgaagt cgtcaatggc ctgatccaga agctggttct
     1921 ggcggtgcac gtgtccggca agcagcggga agttcggctc tttgggcagg acccgctcat
     1981 accggcttac gagagagagc acatcgtcat agcggccgag gttataaaga tcgtaggcca
     2041 gataaacggc tgcgtcgcga tctttcggca ttttcaccac agcctgctgg ccgtagcgag
     2101 ccgactcgag atagcgtcct ttatggaaca gataacgctc attttcgcgc atcacccgcg
     2161 ggtcgttctt catggtgccg gtggcgcggg ccacccattt gccggccagg tcgatctggt
     2221 gagcgtcaat cgctgcgttt gaaccgccta cgatgatctg tggattggtc ggagcaatct
     2281 tgtaagcctt ctcgtagctg tcttcggcct ttgcgtactg cttcgtattc gtgtagagat
     2341 cgcccagcgc tacgtagggg acgtagtctc ccggataagc ctgcgccatg cgggtgaaaa
     2401 agcgctcagc ggccttgttg tcgcccatat ctcgggagag atagcccatc gcttccagtg
     2461 cgtaccggtt gttctcgtca tgctggagca gcgtggcata catgcgctgc gcgtccgctt
     2521 tgcgcccggc tttccaaagg atgctgccat actgcagcat cacgttggcg ttgttaggat
     2581 caagattcag cgcttctttc aggtcagctt ccgcccctcc aaagtcattg cccagaccct
     2641 tgatcgctgc tcgcaggcgg aggtattcaa cccggtcggg cccctgaacc tgcatccccg
     2701 ccaactgctg ctgggctatg gcgatctgct ggttggcaga gcggtcgtca tccagcgctt
     2761 tgtaggtgtc gatgaggtta agcctaagct gcgtgggata cagcaagcct tccgccggcc
     2821 cttccggcat tgccgccaaa gctgccaggt attctttcac cgcatcgttg tcgcgccgct
     2881 ccagcttggc cagatcgccg cgaatcgcgt gcaggcggta gtaattagga tcaatctgct
     2941 ctgcgcgcgc gagatacgtc ctggtctttt ccagattgcc gattcgcatt tgcgccgcgg
     3001 ccgccgagag ctgcacattg gctgacttgg gcgacatctc tgccgccttg tcataagccg
     3061 ccgctgactc cttcttcatc cccgccaatt cataggtgta gccaagctcc gacatcacgt
     3121 ccgcagtctt acggggcgct ttgttcaggt attcaattgc ctttttataa tcgtgggcct
     3181 cgcggtagta ctggccaact gcccggtaca catcagtgtt ctttggggcg cgggtcaggg
     3241 ccttatccag gaaagccttg gccctgtctg gctgcttctg cttcataaag gctgaagcca
     3301 gaagcaactc ggtgtgcgac gcgggctcga tcccttccga tctctccagc aggtttgtcg
     3361 cctggcgcag gtcgcccgac tgcatgaaaa gctcgcccgc catcgccaag tcattggcac
     3421 ggcgagggtt ggcggcaatt acctgcagca gcagcttctt ggcttcgtcg gctttgccca
     3481 tccgcatgta ggtctgggct ttgcccgaga ggccttccac ggagtttgga gcacgctgca
     3541 ggcctttgtc gaaagcgctc aacgagagcg aattattgcc tgccaaccgc gacgcgtatc
     3601 ccaataggaa ccagttccgc gggtcattgg gggcagcctg tgttacgcgc tgggcgtagc
     3661 tcatggcggc tgcggtgtcg cccttcttaa gggcctcttc caccgcccgg gcattgcggc
     3721 ctacttcaat actgcttccc cagccaatgc cgccgctcga cgaggcagac ggttcctggg
     3781 gcgcacctga cgactgctgc ttgccaccct tcttgctcga ctgtttcttc tggttctgcg
     3841 cgggctgcga gccgttgatg tcaaacgtct gcgcagctcc gagtccggca agcgacaggg
     3901 agaagaggaa aaccagactc agggaatatc tcttcacggg accaccaatc aaggttttga
     3961 atcacacagc ggagtgcctg cggcaattcc gcaacattat tccgggtaaa agacctttgc
     4021 tgctttccag aagccctcag gcacgcgcgg gggaattgcg ctgaggcgtg gacgacagca
     4081 gctctgatct catctgaatc gagatgctga ttctgctctg cgggattgct ggacgggcgt
     4141 gattcttccc ccatgtggaa tcggaatacc acaaggcaaa cccttcccgc ctttttgaat
     4201 cgaaacagtg ctgaaagcaa aactgctgct gaatcatttt tccgttctca tgtagttgct
     4261 taccgcggag gtctttcatg agttccccat ccatggccgc cggcagggaa gttccaatgc
     4321 tgggccgcac gatccccctg agctggatca tgctgctggc gctgctggtg catggcccgc
     4381 tgcttttgat gcagttgccc aacgcgtcct atgacgcgaa cttccacaag ttctttgcgt
     4441 cacattacgc gcagcactgg ttcaatccct ggaacgagaa acagttcacc gggttctccc
     4501 agaccacgta tcctcccatg gagcaacagt ggctggccct gatctctcac gttctcgggc
     4561 tggacctcag ctatatggtg gtccagttca tcgccatcct gctcctgccg attggagtct
     4621 ttcgctacgc tcgaatatgg gtggacgatc gcgcggcaag ttacgctgcc atcggcagtg
     4681 tcttgcttgg ttcgctggcc ttcctcgtct acgacgcagg ccagctatcg acaacgtggg
     4741 cagcgccgct ttacctgatc gcgctcggct acttctacga ctggacccgc gaagccaaag
     4801 tttccgcttt gcttaagtcg ctggccctga cgtgggctgc agcatccgcg caccacgtga
     4861 ccctgctgtt cgccagcgtg ttcttcaccg tgcctgtcct catcacggcg atcatggacc
     4921 gcaataccga aggtcgcgat gccagcacgc cgggcgtgat ctcccgcgcg gcggtcttcg
     4981 cggtgctcgc ggtcgccggt atcctggctg tcctgtaccc gtactttgtt tcgctgtatt
     5041 acaacccaat caagcagatg cccattccgc accagagccg tgacaactac ttctctgatg
     5101 cgttccattt tttcaactac ctgatcattc cctggggcgc aatgctgctc actctacctt
     5161 atgtgttcgt gaaaggcctc tctgagcgcc gcctgcggcc gctgtttctg ggcttctgga
     5221 tcacaatgat cctcgccctg ggcggcacca ccccgttgcc tcggctgatg ctgggccgcg
     5281 ccttctatgt gttgaccttt gagcgtttca gcttctgggc cagcatcatg gctctaccca
     5341 ttgtcggctt actggcggtg gaactcattg accggttcgg tcgcaaagcg gtattcacca
     5401 tgggatcgct cgccgcgctc accgtggctg cggccgtcgc atggcccacg tactatgcct
     5461 tgcacgagcc tccgttcagc gttcaatctg taatcgaatt cctcaaccgc gatggccacg
     5521 acaagttccg ctatctgacc cttggctttg gcgccaacaa gatggacgag gtcagcacct
     5581 acggaaacgc cagcagcgtg gacggtgact acaactccgc tcgcctgctg ccagaaatga
     5641 cgcagtacgg cgccggccag ttgaccaatg ccaagtacta cggctcaaac ggcatggaat
     5701 cactccgcgc catgctgaag cacgccgatc actacggcct caaatacatc tttgtccacg
     5761 ataccttcta tgagccgctg ctggcctttg ccggctggcg caaagccgaa acctacgatc
     5821 gcggaaatat cacgctgtgg gtgaaagatg gaattccccc ggcccgtccg acggaatatg
     5881 gccagaagcc cacggcaatg cagggaatcc tctggggcac gctgcccatc ggcagcagca
     5941 tccttgctct gctgcttgtc ctgatattcc ccgatgaacg ccgccgattg ggtgagcaca
     6001 tcgagttccc aagtctcact gaagaaccag ttctgcggga ggcacggtaa tgggacgcat
     6061 acttgccatc atctttgccc tcttgaccgt cgcgctggtg gcggcgggct ccgtccacaa
     6121 gagttccaca gcaaccgctt cgtcaccgga agaggccgtg caatcgctgc ttgcgaatgc
     6181 aaaaggccac aactgggacg gcgcatattc atacgtggcc aaagccggca atgttgatct
     6241 gcccaatttc cagcacgata ttcagggcaa gaacggcagc ctgcgcacct attcttccat
     6301 cgacagctac caaacccgcg tgctccggca gaatgatgat gaaggtttgg tacgcaccga
     6361 cgtgaaatat tcaaccgcag tgggcccgtt ctatgacact cgtgacctgc gcgtcgtacg
     6421 cgaagggaac gtatggaaag tcgtctggcc ggtgcagaaa gagcagaacg tcccaccgca
     6481 ggtgatcccg gtcaactatc tgcgctggga catcatctgg cgcggctcta atgacgattg
     6541 gggcgctcag gatgtggaga gcccgcacgt gcgcatcctc tccatgcacg ccagcgagcg
     6601 cgacaacacc gtcatcgttt tgggcgaagt ggtcaatgag gacactgtgc ctgctttcgt
     6661 cagcgtaggt gcaaccctgg tcggaacaaa tggccaggac atggcagagg agacgagttt
     6721 cgataagacc tcgcacgtcc tgctcccgaa agaagtttct ccctaccgca tcgatttccc
     6781 gggcgtcaag ctggcggacg tcaagtctgc ccgcatgaag cccgattcca tgctggttcc
     6841 ggcgtcagcc gacccggtga ttggcgtgct gcaccagcga atcgagcagg acgcaaaagg
     6901 ccataccgtg cttcggggcg aactgctgaa tgagagcggc cagaccgtga acatccctca
     6961 cgtcctggct accttctatg acaattcagg ccaggtgatc tgggtttctg acggctacgt
     7021 agatcacgcc ctgcagccac aggttccaga ggcctttgct gttgatctgc gtgatgaact
     7081 ggcctctcag gtccacacat atcgggtcac cgtgaatcag tacagcatta accgtcagga
     7141 gtagcgaatg cgcagaatct cattctggat tgtggtgttt gtgctctgct gggtcgcggc
     7201 tgatctggcg cacggcgcag acctgcgcgt gccgcaggac gcgacggcgg gccagtcgct
     7261 gaccatcggc accggaggcg gtgacactct gtatctggtc ggccccgggc aggtgattaa
     7321 gcgtaagatc agcggcggcg gagatgtcca gattcccggc gacgagttgc acaatgccgg
     7381 gcgctggatt gctattgttc gcggcggagc caatgaatcc caggtcttct gggtgcgtcc
     7441 cggcaaagcc gaaaacctga actttctggc ccgtccttcg cgggtgccgg tgaaccggcc
     7501 gggcgtaatc agcggcgtgg ccttcgtctt cgataagtac gaaaacctgg tgcttgatcc
     7561 cacgcaggtg aagttcagcc tgagcgttgg cgctgctcac gccgagcacg cggccaccag
     7621 cagcaacggc gtggcgtggg taacaagctc atcggcgccc aaagcgggtg ccgcacagtt
     7681 cgtggcatcc ttaccagatg cacaggttcg gcgcgtgatc gagcaggttg catccgaacc
     7741 gtgctacagc aaattacgca tgaaggtggt ccagcgtgac aagggcaagg tggtagtgga
     7801 gaccgatccg gtggttgact gcactggcaa tgccgtgccg gacggaacaa tcgtcacctt
     7861 cacccagact gacccgacag gccggagcgt ggtggatgcg cgcatcaaaa agggtgtggc
     7921 gcgggcgcag cttccggctg aaccaaacgc gcgcatcagc gtggcttcgg gcgtggtgct
     7981 gggcaatgaa attcggctgg gaggcgggga atgagagtca ctcgaattct ggttctcaca
     8041 cttggggttg ccgtggcgat ctccggcgct ctgcccctcg tcgagcgcgg gctcgcg
//
LOCUS       DASQYP010000135         8168 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_178022, whole genome shotgun sequence.
ACCESSION   DASQYP010000135 DASQYP010000000
VERSION     DASQYP010000135.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 8168)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8168)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8168
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_178022"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..787
                     /locus_tag="VE783_04245"
     CDS             <1..787
                     /locus_tag="VE783_04245"
                     /inference="COORDINATES: protein motif:HMM:NF039842.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF5752 family protein"
                     /protein_id="HYX52636.1"
                     /translation="GFRTTEYGPAASEKNWTNQRTGEQPAAETVSMATAPQLPTTRSR
                     WAKAPFYFNSAAHLLRIGREKASNLQELLDAIRNCSDASIFQHTFQTLEEHHFIQEGF
                     SNDFSHWAFAACNEVELAERLAAIDVREFTSIPALRERIVHIIESYLQKNPRAATRAA
                     MEPFYLMAADVVVVPTPYVARNLEEFVDALKKVSVHAIYYHFIDARLRLKLNNNDFSV
                     WLEAELDMPQLADRLNRIDIYTSTLDDVRGAIVRMVETHAGRA"
     gene            892..2445
                     /locus_tag="VE783_04250"
     CDS             892..2445
                     /locus_tag="VE783_04250"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012744.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HYX52637.1"
                     /translation="MSDKDNKEKKNNRGSRKQGSTSDPLNTDARQETAVVEHDASENG
                     AESTIASEVASGRTPVEVESPSAPAEAEPSGVKERRFRQTDLPAHFIERRKHPRIQTE
                     PPPPPAPPRFDDYEAIIGRPELDEIRFLARHLRGKTVKMVNSTAVGGGVAEILNRLIP
                     LMNELEIPTRWEVITGGNDFFEVTKGFHNALHGGDYNLTKNIKDIFMSYNEQNRQRMQ
                     FPEDLFVIHDPQPVGLVRSRNENRGRWIWRCHIDLSNPHSDVWDFLKPMVEQYDAAIF
                     SAPAFTRQLNVPQYLFYPSIDPLSEKNKDLEESYINKVCDDFGIDRSRPILTQISRFD
                     RLKDPVGVIEAYKLVKKYVDCQLVLAGGGATDDPEGAVVLQEVMEAAGDDPDVIILNL
                     PPWSALEINALQRASTVIIQKSLKEGFGLTVTEGLWKEKPVVAGAVGGIPTQVIHKLT
                     GVLVHSVEGCAYQIRYLLTHPEFAAQLGKNGKAHAKENFLITVNLKRWLLLFQLLLGM
                     AKPAKEAMI"
     gene            2775..3218
                     /locus_tag="VE783_04255"
     CDS             2775..3218
                     /locus_tag="VE783_04255"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52638.1"
                     /translation="MKIRRIPLIPLVTLLLGCGSMMNNPTTRQLTAITVSPASAVVQN
                     GTSKQVQFTAMGTYNMAPMTATPQVVWSIAQDTGMMGPGMMGMMAASTTPAGVTISAS
                     GMAQCTTFTGTVMVSATSPMDPTMPMGQMGAMTMNVTGSAQLTCP"
     gene            complement(3227..3739)
                     /locus_tag="VE783_04260"
     CDS             complement(3227..3739)
                     /locus_tag="VE783_04260"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52639.1"
                     /translation="MKPLYKGFIIAALHVAIVLSLGGKLLYDRATRPRIWVRTASVDP
                     DLPIRGRYFTLSLQVKAPGMRPSGPVKASAFQFETVELSVENDKLVAHKSERNTGLRI
                     SDPWRGPTADDTYLLWPAVTFFVSEHAPNLNVKAGEELWAEVTVPLKGPPRPIQLAVK
                     RDGKWVPLTY"
     gene            complement(3736..4878)
                     /locus_tag="VE783_04265"
     CDS             complement(3736..4878)
                     /locus_tag="VE783_04265"
                     /inference="COORDINATES: protein motif:HMM:NF021446.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2157 domain-containing protein"
                     /protein_id="HYX52640.1"
                     /translation="MADLEHQLKRWTDANLISAQTAERILLFEQQPGKGKLRWPAILA
                     VGFGALMLCAGILLFVAAHWEDLSPTQRFSLVLAMVAIFHVGASLLGEKVPAIGIALH
                     VAGTVSLGGGIFLAGQIFNLEEHWPGGVMLWALGAVLGYVILRQWPQALLAAVLIPWW
                     LGGEWLVATERYDGAWNIAAQGFLLLAILYMSAAPREPNRALRLGMVWVGALTLLPFM
                     LDVIATAEYHQYWFGARRTPAPAGVLLVGYSLAYLPTLALAATMRMKKALPIFVASAW
                     VFALAMISHGENPEHNVGLYLWVALGACALCYWGMQENRRLFINFGTAIFAIDVITFY
                     FSDVLDKLGRSMGLILLGVLFLAGGWILNRLRTDLIARAAAAGGAQ"
     gene            complement(5021..5755)
                     /locus_tag="VE783_04270"
     CDS             complement(5021..5755)
                     /locus_tag="VE783_04270"
                     /inference="COORDINATES: protein motif:HMM:NF021371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2071 domain-containing protein"
                     /protein_id="HYX52641.1"
                     /translation="MHPLLLEVAHRTAPLPQKPWVGVQTWNDLLFAHWKYPLEHLRIL
                     VPAELQLDLFEGEAYVGVVPFWMSGVRGRWQPPIPGVSRFPEMNVRTYVRVNGIPGVY
                     FFSLDAASRVAVWGARMFYHLPYFFAEMSVHSVGEKVHYKSRRLEPPAPAEFRGLYWP
                     AGAVKQQKSALENFLSERYCLYTVHRGRVYRAYIHHLPWPLQPADAEIDTLTVAQAQG
                     LELPQEKPMLHFSRTLDVLVWPIERV"
     gene            5878..6783
                     /locus_tag="VE783_04275"
     CDS             5878..6783
                     /locus_tag="VE783_04275"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HYX52642.1"
                     /translation="MQGRTAVITGATSGIGLIAAKNLAAMGARIILVARDRQRAQATL
                     DALRQAGPAADHRAYFADLSLLADMKRVASEIAAAEPRIHVLLNNAGAMFRDRQLTLE
                     RLEKTFALNHMSYFVLTFLLRDKLAAAGAARVINVSSHAHKGNSLNFTDLQSERSYAG
                     FRSYGRSKLCNVLFTSELARRWAATGITANSLHPGFVNTRFGGEAGGRKFRLAKRLFA
                     LSPQKGAETMTYLASSQDPFVTNANGLYFYRKKPVPPSREAQDRQSAETLWRMSEQIA
                     GFADPAHGHIANSHMDVTASPSFAD"
     gene            6976..>8168
                     /locus_tag="VE783_04280"
     CDS             6976..>8168
                     /locus_tag="VE783_04280"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC-F family ATP-binding cassette
                     domain-containing protein"
                     /protein_id="HYX52643.1"
                     /translation="MPPIINARQISKQFGATPLFESISLTVSEGDRIGLIGPNGSGKS
                     TLLRILAGEMETDSGELAWRKRSKLAYVQQQSEFAPQDNVRAVITRALHRAAVSEEDR
                     EGRLVEALGRAGFSDFNAAAQSLSGGWRKRLAIVEALVQEPDVLLLDEPTNHLDLEGI
                     EWLEELLETASFACVVVSHDRYFLENVATEMVELSRAYPEGLLLVPGNYSEFLTKKEE
                     FLHAQARHQEALENRVRHEIEWLRRGAKARTRKAKARIDKANQLISELGDLNARTRTA
                     TTDIDFSATDRKTKRLIELNGLAYEIGGRTLFRDLNFLLTAGKRVGLVGPNGSGKTTL
                     LRLLKGDLQPSVGEIRRAEFLRIVYFDQNRPLDPDVTLRRALAPESDSVVYQDRVIHV
                     AGWASR"
BASE COUNT         1786 a         2500 c         2266 g         1616 t
ORIGIN      
        1 aggtttccgc acaacagagt acgggcctgc ggcatctgaa aaaaattgga ccaaccagag
       61 aacgggtgaa caacccgcag cggagactgt ttccatggcc acggcaccgc agttacccac
      121 tacgcgttcg cgctgggcga aggcgccttt ttatttcaat tcagcggcgc atctgcttcg
      181 catcggccgc gaaaaagcca gcaatctgca ggaactgctg gacgcaatcc gcaattgcag
      241 tgacgcttca atcttccagc acaccttcca gaccctggaa gaacatcact ttatccagga
      301 aggtttttcc aacgactttt ctcactgggc ctttgccgcc tgcaatgaag ttgagcttgc
      361 cgagcggctg gccgccattg acgtccgcga gttcacttcc attcccgcgt tgcgcgaacg
      421 cattgtgcac attattgaaa gctatctgca gaagaacccg cgcgcggcca ctcgcgccgc
      481 catggaaccc ttttacctga tggccgccga cgtggtggtg gtgcccacac cctacgtggc
      541 ccggaatctc gaagagttcg tggacgcctt gaaaaaggtc agcgttcacg cgatttatta
      601 ccacttcata gacgcgcggc tgcgcctcaa gctcaacaac aacgattttt ccgtgtggct
      661 tgaggctgag ctcgacatgc cgcaacttgc cgaccggctc aaccgcattg atatctacac
      721 ttcaaccctt gacgacgtcc gcggcgcaat cgtgcggatg gttgaaacgc acgcgggccg
      781 ggcttaagcc gcagagaagc ttcagtcgca accgaaaagt attttgggac cgcacaacgc
      841 tgttaactgc acaagatttc agtcgcaaca aaagaatttg ggtggagcga gatgagcgac
      901 aaagataaca aagagaaaaa aaacaaccgg ggaagccgca agcaggggtc cacttcagat
      961 ccactgaata ctgacgcccg ccaggagacc gcggtggttg aacacgacgc cagcgaaaac
     1021 ggcgctgaga gcacgattgc gtccgaggtg gccagcggca gaactcccgt ggaagttgaa
     1081 agcccttctg cgccggccga agccgagcct tcgggagtga aagagcgccg cttccgccag
     1141 actgatcttc ccgcgcattt catcgagcgc cgcaagcatc cgcgtataca gacggagccg
     1201 cctccgccgc ccgcgcctcc gcggtttgac gactatgagg ccatcatcgg ccgcccggag
     1261 ctggatgaga ttcgcttcct cgcgcgccac ctgcgcggca agaccgtaaa gatggtgaac
     1321 tccaccgccg ttggcggagg cgtggcagag atcctgaacc ggctcatccc gctcatgaac
     1381 gaactggaaa ttcccacccg gtgggaagtc atcaccggcg gcaatgattt ttttgaggtc
     1441 accaagggtt ttcacaacgc gctgcacggc ggcgattaca acctgaccaa aaacatcaag
     1501 gacatattta tgtcctacaa cgagcagaac cgccagcgca tgcagttccc tgaagatctg
     1561 ttcgtaatcc acgatccgca gccggttggg ctggtgcgct cgcggaatga aaatcgcgga
     1621 cgctggatct ggcgctgcca catcgacctt tctaatccgc attccgacgt ttgggatttc
     1681 ctgaagccga tggtggagca gtatgacgcc gccatcttct ccgcgccggc gtttacgcgc
     1741 cagctcaatg tcccgcagta tttgttttat ccgtcgatcg atccgctgtc agagaagaac
     1801 aaggacctgg aagaaagcta catcaacaaa gtgtgcgacg actttggtat cgaccgctcg
     1861 cggcccatcc ttacgcagat ttcgcgcttc gaccgcctga aagatccggt gggcgtgatt
     1921 gaggcctaca agctggtgaa gaagtatgtc gattgccagc tggtgctggc gggcggcgga
     1981 gcaacggacg atcctgaagg cgccgtggtg ctgcaggaag tgatggaggc cgcgggcgat
     2041 gatcctgatg tgatcatcct gaacctgccg ccgtggtcgg ccttggagat caacgcgctg
     2101 cagcgcgcct caacggtgat catccagaag tcgctgaaag aaggtttcgg cctcaccgtc
     2161 accgaaggtc tctggaagga aaaacccgtg gtggccggcg ctgtcggggg gattcctact
     2221 caggtaattc ataaactcac aggagttttg gtgcactccg ttgaaggctg cgcctatcag
     2281 attcgctatc tgctcacgca tcctgagttc gccgcgcagc tgggcaaaaa cggcaaggcg
     2341 cacgcgaaag aaaatttcct gatcaccgtg aacctcaaac gatggctgct gctcttccag
     2401 ttgctgcttg gcatggccaa gccggcgaag gaagcaatga tttaaaaaag ctgctagctt
     2461 ctggctgctc gcttgaacag gtacttggta cttggttatt ggtgctcccg gggccgcatt
     2521 gctccgagcg ccgcaaggcg cgtcgtcagg ttaacccccg gtggaggcgc gcagcgccgg
     2581 aaccggaggt gtgtgcagat agacgggtat gtgcagataa atgtccgagc gccgtaggtg
     2641 caggaagtgc ctcatccact aacccaatac aaccaccaaa tgccaagtac ctgctgcata
     2701 ttcctggata gatatatcgc ccggcctgtc tgcagaggcg tagaatgttt gtcagctttc
     2761 catgggaggc agctatgaag atccggcgta tcccacttat tccccttgtc actctgctgc
     2821 tcggctgtgg ttctatgatg aacaacccta ccacccgtca gctcaccgca atcaccgttt
     2881 cgcccgcgag cgcggttgtc cagaacggaa ccagtaagca ggtgcaattc actgccatgg
     2941 gaacctacaa catggcgccg atgaccgcca ctccacaggt ggtctggtcc atcgctcaag
     3001 ataccggcat gatgggcccg ggcatgatgg gcatgatggc cgccagcacg actccggccg
     3061 gcgtgaccat ctccgccagc ggcatggcgc aatgcaccac tttcacgggg acagtgatgg
     3121 tctccgctac gtcgcccatg gatcccacaa tgcccatggg gcagatgggc gcaatgacca
     3181 tgaacgtgac gggaagcgcg cagctcacct gtccttaagt tgggattcag taagtgagcg
     3241 gaacccactt tccgtcgcgc ttcacggcga gctgaatagg acgcggcggt cctttgagtg
     3301 gtaccgtcac ctcagcccag agttcctcac ccgcctttac gttcagattg ggcgcgtgct
     3361 cggagacaaa gaaggtgacc gcgggccaca ggagatatgt gtcatcagcg gtggggcctc
     3421 gccatggatc ggaaattcgc aatcctgtat ttcgctcact tttgtgcgcc accaatttgt
     3481 cattctccac cgacaactcc acggtttcaa actgaaatgc cgaagctttc accggccctg
     3541 aaggcctcat tcccggtgcc ttcacctgca ggctcaacgt gaagtatcgt ccgcggatcg
     3601 gcagatcggg atccactgag gccgtgcgca cccagatgcg tggccgcgtc gcgcgatcgt
     3661 agagcagctt cccgccgagg ctgagcacaa tcgccacatg cagcgcggcg atgatgaatc
     3721 ctttataaag cggtttcatt gcgcacctcc cgcggcagcc gcgcgcgcaa tgagatctgt
     3781 gcgcaaccgg ttcagtatcc aaccacccgc caggaagagc actcccagca ggatcagccc
     3841 catggagcgc cccagcttgt ccagaacatc agagaaatag aaagtgatca catcaatggc
     3901 aaagatcgcc gtgccgaaat tgatgaacag cctgcgattc tcctgcatgc cccagtaaca
     3961 gagcgcgcag gccccaagcg ctacccacag gtaaaggccc acgttatgct ccggattttc
     4021 gccatggctg atcatcgcca gcgcgaacac ccacgctgac gctacaaaga ttggtagcgc
     4081 tttcttcatg cgcatggtcg ccgcgagtgc aagcgttggc agatacgcca acgaatatcc
     4141 cactagcagg acgcctgccg gcgcaggcgt tcgacgagcc ccaaaccaat attggtgata
     4201 ctccgccgtc gctatcacat ccagcatgaa aggcagcagc gtcagcgcgc caacccagac
     4261 catgccaagc cgcagcgccc ggttcggctc ccgcggcgcg gcagacatat aaagtatggc
     4321 cagcagcaaa aatccctgtg ctgctatgtt ccatgcgccg tcgtagcgct ccgttgctac
     4381 cagccactct ccgcccagcc accatggaat caggaccgca gcgagcagcg cctgcggcca
     4441 ttgccggagg atcacatatc ccagcacggc gcccagcgcc cacaacatca cgccgccggg
     4501 ccagtgctct tcgagattga aaatctgtcc ggccagaaat atgcctccgc ccagtgagac
     4561 ggttccggcc acatgcagcg cgattccgat agcaggaact ttctcgccca gcaggctcgc
     4621 acctacatga aaaattgcca ccatcgccag cacaaggcta aaccgctgcg ttggagaaag
     4681 atcttcccag tgggctgcca caaacagcag aatcccggca cagagcatca gcgcgccaaa
     4741 gccgactgcc agaatcgccg gccaccgcag tttgcctttg ccgggctgct gttcgaagag
     4801 gagaatgcgt tctgcagttt gcgctgaaat caggttggca tccgtccagc gcttcagttg
     4861 gtgttctagg tccgccattt gctcgctccg ggaaccacgt gattatgcac cagtaactcg
     4921 ggaaagcaag taagccatgt cacgttgaga aagcgcgagc cggggttctt tgcagaattt
     4981 atagcaggaa tggaatcagt aatttgcggc ccatgcggct ttagacccgc tcaatcggcc
     5041 acaccagcac gtccagcgtg cgcgaaaagt gcagcatagg cttctcctgc ggaagctcaa
     5101 gtccttgtgc ctgggccacg gtgagcgtgt caatctccgc atcggcaggc tgaagcggcc
     5161 aaggcagatg atgaatgtac gcgcggtaca cccgcccgcg atgcaccgtg taaaggcagt
     5221 agcgctcgct caaaaagttt tccagcgccg acttctgctg cttcaccgct cctgccggcc
     5281 agtacagtcc gcggaactcc gccggggcag gaggctccag ccgtcgcgat ttgtaatgca
     5341 ccttttctcc cacactgtgg actgacatct ctgcgaaaaa gtacggcagg tgatagaaca
     5401 tgcgcgcgcc ccacacggcc acgcggctcg ccgcatccag gctgaaaaag taaacgccgg
     5461 gaattccatt cactcggaca tacgtccgaa cgttcatctc aggaaagcgg ctcacacctg
     5521 gaatcggcgg ttgccatcgt ccgcgcacgc cgctcatcca gaacggcacc acgcccacgt
     5581 aagcttcgcc ttcgaacagg tccagctgca actcagccgg aaccagaatg cgcagatgtt
     5641 ccagcggata cttccaatgc gcgaacagca gatcattcca ggtctgcacg cccacccacg
     5701 gcttctgcgg gagcggagcc gtgcgatgcg cgacctcaag caatagcggg tgcatgttta
     5761 aatcctaatc agttgacagt cgctgaggga acaaaggctc tccacaagaa atcctaatta
     5821 gctgagagta attaaagcca gttatcgttg ttcttaatgc tctcttctgt gcggaccatg
     5881 cagggtagga ctgcagttat cacgggtgcc acctctggga ttggcctcat cgcggcgaaa
     5941 aatctggctg ccatgggtgc aaggatcatt cttgttgctc gtgaccgcca gcgtgctcag
     6001 gccacattgg acgcgctcag gcaggcaggc cccgctgccg atcaccgtgc ctacttcgcg
     6061 gatctcagcc ttcttgcgga catgaagcgc gtagcatcag agattgccgc cgccgagccg
     6121 cgcatccatg ttcttttgaa caacgctggc gccatgttcc gcgaccgcca gctcacgctt
     6181 gagaggttgg aaaagacctt cgcgttgaac cacatgagct atttcgtgct cacgttcttg
     6241 ctccgcgata agctcgcggc agccggagcg gcgcgcgtca tcaatgtctc ttcacacgcg
     6301 cacaaaggta atagcctgaa tttcactgat ctccagtcag aacggagtta cgcggggttt
     6361 cgttcctacg gccgttccaa gctatgcaac gttcttttca ccagcgaact tgcgcggcgc
     6421 tgggccgcaa ctgggatcac cgccaatagc ctgcatccgg gattcgtaaa tacccgtttc
     6481 ggtggcgaag ccggcggccg taagtttcgc ctggcaaaaa gactcttcgc gctctcgcct
     6541 cagaaaggcg ctgagactat gacctatttg gcatcttcgc aggatccttt cgtgacaaac
     6601 gcgaacggtc tctattttta ccgcaaaaaa ccggtgccgc cctcgcgtga ggcgcaggac
     6661 cggcagtcgg cagagactct ttggcgcatg agtgagcaga tcgctggttt cgctgatccc
     6721 gcccacgggc acatagcgaa tagccacatg gatgtgaccg cttcgccttc attcgcggat
     6781 tgattcgctg ggctgcttcg gcgcatgttt cgcccgccgc tcatggattt cactcgcccc
     6841 ttgggctcgg attggtctgg actctgagtc ttccgtctta aatgtcctcg acggctggaa
     6901 ttgcgcatgc tcgcggatgc cgctccgtca tgcattatgc tgaaagtagc atcgctatta
     6961 aggacttcgc gcagattgcc tccaatcatc aacgcccgcc agatcagcaa acagttcggc
     7021 gccacgccgc tgtttgagag tatctcgctg accgtctctg aaggcgaccg catcgggctg
     7081 atcggcccaa acggctccgg caaatctacg ctgctgcgca tcctcgcagg cgaaatggag
     7141 accgactccg gcgagctcgc atggcgcaag cgcagcaaac tggcctacgt gcagcagcaa
     7201 tcggagttcg cgccacaaga taatgtgcgc gcggtcatca cgcgcgcgct ccaccgtgcc
     7261 gccgtttcgg aagaagatcg cgaaggccgg ctggtggaag cgctcggccg cgccggcttc
     7321 tctgatttca acgctgccgc gcagtcgctc tccggcggat ggcgcaagcg cctggccatt
     7381 gttgaagcgc tggtccagga accagatgtg ctcctgcttg atgagcccac caatcacctc
     7441 gatcttgaag ggattgagtg gctggaagaa ctgcttgaga ctgcctcgtt cgcctgcgtc
     7501 gtcgtcagcc acgatcgtta ttttctggag aacgtggcta cagagatggt cgagctgagc
     7561 cgcgcctatc ctgaaggcct gctgcttgtg cccggcaatt acagtgagtt cctcaccaag
     7621 aaagaggaat tcttgcacgc gcaggcgcgc catcaggagg cactggaaaa tcgtgtacgt
     7681 catgaaattg aatggcttcg ccgcggagcc aaggcccgaa cacgcaaagc caaggctcgc
     7741 attgacaagg ccaaccaact catctccgag ctgggcgatc tcaacgcgcg cacccgcacc
     7801 gccaccactg acattgattt ttccgccacg gatcgcaaga ccaagcgtct gatagagctt
     7861 aacggcctgg catacgaaat cggcggccgt actctcttcc gcgacctcaa cttcctgctc
     7921 accgctggca agcgcgttgg acttgttggc ccgaacggca gcggcaagac gacccttctg
     7981 cgtctcctga agggagatct ccagcccagc gttggtgaaa ttcgccgcgc tgagtttttg
     8041 cgcatcgtct actttgacca gaaccgtccg ctggacccgg acgtcaccct ccgccgcgcg
     8101 ctcgcgccgg agagcgattc ggtcgtttac caggaccgcg tcatccacgt ggccggatgg
     8161 gcatcgcg
//
LOCUS       DASQYP010000136         6859 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_304200, whole genome shotgun sequence.
ACCESSION   DASQYP010000136 DASQYP010000000
VERSION     DASQYP010000136.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 6859)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6859)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6859
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_304200"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            267..1991
                     /locus_tag="VE783_04285"
     CDS             267..1991
                     /locus_tag="VE783_04285"
                     /inference="COORDINATES: protein motif:HMM:NF044955.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2207 domain-containing protein"
                     /protein_id="HYX52644.1"
                     /translation="MCKARFLLLCLVLVVSLPAWARTYHIANFNSTIHVDPDGSARVE
                     EQITFVFRGTYQGVYRDIPVDYPGPHGSNYSLFVHVDKITDDSGTELKYEKNTSNGYL
                     KLKIYVPGAVDATRRINIDYSVPNATKFFPDYDEFYWNVTGNDWPVPIEAATAIVYFP
                     AEASGAMRAAAYTGIYGSSEKGKSSIEGPTASFETNGPLPMRGGLTLDVALDKGVLHE
                     PSGLTKASRFVRSNPVLALPVWAFVVMFGLWWFKGRDPNPGMSVAPMYEPPKDMGPAE
                     VGTLIDNSTDPRDITSVLVDLAVRGYLKIVEVPHKGLLFTSKDYELHLLKDQSAWGDL
                     TDYEQAMLSRIFSSGSVTRVSDLRNHFYTVLPTVKSEIMAALDSKGMYTVDPNSAAGY
                     FVTGALVIFVPFAIAQWARWADFLSGFGVAAMSGIAAVVILVLFGRLLTATSVKGART
                     RVAILGFQEFMNRVDADRLKRMPPDTFEKYLPYAMALGVEHRWAKAFEGIIQNPPSWY
                     QGDWTPGSTWSSFYFVNSLGSMTQQTASAFVAAPRASSSSSGWSGGGFSGGGFSGGGF
                     GGGGGGAF"
     gene            2192..2794
                     /locus_tag="VE783_04290"
     CDS             2192..2794
                     /locus_tag="VE783_04290"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52645.1"
                     /translation="MADALRDQGSDIPDFDTYPATPGSAERLLPETASEANFGSTLEE
                     RAFQLGEALGRAMVRIRHLRGEIEGRVREMNADASSRLSDVTDTAKAKLSDAADSARA
                     KLSDVTDTARARLSDAADTAQAKLGDLKEKASWQAEELKQTTRERWGQMRRQVRHNVY
                     VARVRVHEMERDHPVEMALGAGAAGVVVGAALRIWRASRA"
     gene            2787..3209
                     /locus_tag="VE783_04295"
     CDS             2787..3209
                     /locus_tag="VE783_04295"
                     /inference="COORDINATES: protein motif:HMM:NF018980.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phage holin family protein"
                     /protein_id="HYX52646.1"
                     /translation="MHRVNHVHTEKSLGTVLSETKEELKDFVQTRIAMLRAELKEKIN
                     TWKYAIPLMFAAAVLLLAGVIVLTFAFVALVAAWLPQSPFNWFWAGLIVAGIYFVMAV
                     AIGWFAYAEFNSVGVAPNRTLEVLKQDQVWMQNEARTA"
     gene            3206..3421
                     /locus_tag="VE783_04300"
     CDS             3206..3421
                     /locus_tag="VE783_04300"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52647.1"
                     /translation="MTDAIPVDVLEKRAAEQRRQLHNSVIELRQSVKDRLDVKRNVRE
                     HLWSAAGALAVIGLVVGYAVAGVFTSD"
     gene            3622..3963
                     /locus_tag="VE783_04305"
     CDS             3622..3963
                     /locus_tag="VE783_04305"
                     /inference="COORDINATES: protein motif:HMM:NF018894.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0035438 - cyclic-di-GMP binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PilZ domain-containing protein"
                     /protein_id="HYX52648.1"
                     /translation="MSSEARTGKRFPLELPIKIHGKRGDDAGTTANMSAAGVYIMADL
                     DLTVGSPIEFDITLPAGVLGTPTDVEVRCSGRVVRKESGAASNGKRKKKNGIACVIDQ
                     YKFMRKAKGSK"
     gene            3964..4617
                     /locus_tag="VE783_04310"
     CDS             3964..4617
                     /locus_tag="VE783_04310"
                     /inference="COORDINATES: protein motif:HMM:NF012422.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HYX52649.1"
                     /translation="MLKIILADNQAIFRTGAAKVLAVEDDLRIVAQAENSEKMMMALE
                     KFHATVMIFGADMHPQLQAVVEAARKFKTRLVLIADTGQDARNFLAGGVHGVIYRNVS
                     GESLVACVRKVSKGETWLQDTQESKETLENDLVGARVRDRLTAKELKIVALIVQGYKN
                     KEIASQLGTTEQVIKNYLRNVYDKIGVSDRLELALFTIHHRILAEAAATSVAAAQQR"
     gene            complement(4652..5023)
                     /locus_tag="VE783_04315"
     CDS             complement(4652..5023)
                     /locus_tag="VE783_04315"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HYX52650.1"
                     /translation="MARILCVDDEPHVVTLKCAILEQAGHTVTASTSARDAMEKIQNN
                     VYDAVVTDWRLGDANGRAVVQAAKNNSSMPVVVVSGFVAEAFQAAEPLADLYLEKPVN
                     PEELVTIVNELLKSSERAASR"
     gene            complement(5226..5849)
                     /locus_tag="VE783_04320"
     CDS             complement(5226..5849)
                     /locus_tag="VE783_04320"
                     /inference="COORDINATES: protein motif:HMM:NF024895.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA];
                     GO_function: GO:0015288 - porin activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="porin family protein"
                     /protein_id="HYX52651.1"
                     /translation="MRKKLFLSAAAIILSATVMASAQDFRSEVSIQGTANLTRNSDNI
                     DIPHRATKSGGFLAGYRYNLSRWFAIQGDYGYTRNTQKYFDPLFGETDVQTNIHMLTG
                     EAVITAPSSSRVRPYGLAGIGGLFFRPTNNLNNNLIGIGNGSGNNQTKAAFVYGGGVD
                     FALTRFVALRAEYRGLIYKIPDFQIPGLASDNFTHTAQPSVGLVWRF"
     gene            complement(6062..>6859)
                     /locus_tag="VE783_04325"
     CDS             complement(6062..>6859)
                     /locus_tag="VE783_04325"
                     /inference="COORDINATES: protein motif:HMM:NF012398.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HYX52652.1"
                     /translation="AAKHNPGQKWIKRVVLEMGGKDAIVVDADANLDAAVEGVAQAAF
                     GFNGQKCSACSRAIIDETIYDVFLERLKDRVNQIAVGDPVENKAVGPVVSDKAYKSIL
                     EYIEVGKKEGRVINGGGPAKEAGEGYFIQPTVIADIAPTARIAQEEIFGPVLAVIKAR
                     NYDEALEIANNSEFGLTGAVYSTSREKLERARHDFHVGNLYFNRKCTGAMVGAHPFGG
                     FNMSGTDSKAGGPDYLLLFTQAKSVAEKIGDAGPINQTMNTRTEASR"
BASE COUNT         1451 a         1888 c         2097 g         1423 t
ORIGIN      
        1 aacgtgcagg tgaagttcta gagacatcgc cgtaatctca ccccagcaat ccaacggcgg
       61 gattgccggg ggccccggaa tcgcgcgtaa tcggaaaagc gtttcaccgc aaaagacgcg
      121 aaggtcgcaa aaggatgctg aagaatcgcc gggatcgccg tcatcgcgcg tgatcggact
      181 gctagagccc agatgccaat ctcgagatcg caaaactgcg gttacaaagg tcaagagtga
      241 taaacctcag ccaatctttc gcgcgaatgt gcaaagcacg ctttttgctt ctctgcctgg
      301 tgctggtggt ttcgctgccg gcgtgggcac ggacgtacca catcgccaac ttcaacagca
      361 cgatccatgt ggatccggac gggtcggcgc gggtggaaga gcaaatcacg tttgtgtttc
      421 gcggtacgta tcagggtgtc tatcgcgaca tcccggtgga ttatcccggg ccgcatggca
      481 gcaactactc gctgttcgtt cacgtggaca agatcactga cgattccggc acggagttga
      541 aatacgaaaa gaacaccagc aatggctacc tgaagctaaa gatttacgtg cccggtgcgg
      601 tggacgcgac gcggcgcatc aacattgact actcggtgcc gaacgcgacc aagttcttcc
      661 cggattatga cgagttctac tggaacgtga ccgggaatga ctggccggtg ccgattgaag
      721 cggcaaccgc gattgtttac ttcccagcgg aagccagcgg cgcgatgcga gcggcagctt
      781 ataccggcat ttatggctcg agcgagaaag ggaagtcttc catcgaggga ccaacggcaa
      841 gttttgagac gaacggccct ctgccgatgc ggggcggatt gactctggat gtcgcgctgg
      901 ataagggagt gctgcacgag ccgagcggat tgacgaaggc gtcccgattc gtccgcagca
      961 atcctgtact ggcgctgccg gtttgggcct ttgtggtgat gttcgggctc tggtggttca
     1021 aggggcgcga tccgaatcca gggatgtccg tggcgccgat gtatgaaccg cccaaggaca
     1081 tgggaccggc agaggtggga acgctgattg acaacagcac ggacccgcgc gatatcacct
     1141 cagtgctggt ggacctggcg gtgcgcggat atctgaagat tgtggaggtc ccgcacaagg
     1201 ggctgctctt taccagcaag gattatgagc tgcacctgct gaaagaccag tcagcgtggg
     1261 gcgatcttac tgactacgag caggcgatgc tgagccgcat cttcagctcg ggaagcgtga
     1321 caagggtctc tgacctgcgc aaccattttt ataccgtgct gcccacggtg aagagcgaga
     1381 tcatggctgc ccttgattcc aagggcatgt atacggtgga cccgaactcg gctgccgggt
     1441 attttgtgac gggcgcgctg gtaatcttcg tgccctttgc tatcgcgcag tgggccaggt
     1501 gggcggactt cctcagcggt tttggagtcg ccgcaatgag cgggatcgcg gctgtggtga
     1561 tcctggtcct ttttggccgg ctgctcacgg ccaccagcgt gaaaggcgcg cgtacccgcg
     1621 ttgcaatact cgggtttcag gagttcatga atcgcgtgga tgccgatcgg ctgaaacgca
     1681 tgccgccgga tacgtttgag aagtatctgc cctacgcgat ggcgctgggc gtggagcacc
     1741 gctgggccaa ggcatttgag ggcatcatcc agaacccgcc ttcgtggtat cagggcgact
     1801 ggacacctgg ttccacatgg agcagcttct acttcgtaaa ctcgctgggc agcatgacgc
     1861 agcagaccgc gtcggcgttt gtcgctgctc cgcgagcgag ttccagttcc tctggctgga
     1921 gcggcggtgg cttctccgga ggaggcttct ccggaggcgg attcggtggc ggcggcggtg
     1981 gggcattttg agcgctatgc tctctcgcca tcagcagcac tcatgtgttc ggatgcactt
     2041 gagcagttgg cgcatgggca gtcgtcagat tggtcagcag ttctgatggt ggatactgag
     2101 ctgccggtgt gagctcaaat cctgcttgca tccttcaaac gcgggaagta aatcccacat
     2161 cctaatacca atagtgggag ggaaccgtct gatggctgac gctttacgag accaaggttc
     2221 tgacattccg gatttcgata cttatcctgc aactccaggg tccgcagagc gcctgctgcc
     2281 cgaaactgct tcagaagcga acttcggatc aacgctagaa gaacgcgcct tccagttggg
     2341 ggaagctttg ggacgggcga tggtgcggat ccggcacttg cggggagaaa ttgagggtcg
     2401 cgttcgcgaa atgaacgccg acgcgagcag cagactcagt gacgtgaccg atacagctaa
     2461 agcgaagctg agtgacgcag ccgacagcgc acgcgccaaa ctgagcgacg tgactgacac
     2521 ggcgcgagcc aggcttagcg atgcagccga tacggcgcag gcgaagttgg gagacttaaa
     2581 agagaaagcc tcctggcaag cagaagagtt gaagcagaca acgcgtgagc gctgggggca
     2641 gatgcgccgt caggttcggc acaacgttta tgtggcccgg gtgcgcgttc acgagatgga
     2701 gcgtgatcat ccggtggaga tggcactggg cgccggagcg gccggcgtgg ttgttggagc
     2761 agctttgaga atctggaggg cgagccgtgc atagagtcaa tcatgtgcat accgaaaaat
     2821 cactcggcac agtactttct gaaaccaaag aagaactgaa ggatttcgtc cagacgcgca
     2881 ttgccatgct gcgggccgag ttgaaggaga aaatcaatac ctggaaatat gccataccgc
     2941 tgatgtttgc cgcggctgtg ctgctgctgg ctggcgttat cgtgctgacc tttgctttcg
     3001 tggcgctggt ggcagcctgg ctgccgcaga gtccgtttaa ctggttctgg gcggggctga
     3061 ttgtggcagg tatttatttc gtgatggccg tggcgattgg ctggttcgct tatgccgagt
     3121 tcaactctgt gggtgttgcc ccgaaccgca cccttgaggt cctgaagcag gaccaggtct
     3181 ggatgcagaa tgaagcgagg acagcatgac cgacgcaatc cctgttgatg tgctggaaaa
     3241 acgggcggct gagcagcgac gccagctgca taactcagtc attgagcttc gccagagcgt
     3301 aaaagaccgg ctggacgtga aacggaacgt ccgggagcat ctgtggagcg ccgccggggc
     3361 gctggccgtg ataggtctgg tggtgggata cgcggtggcg ggagtcttca cgtcagatta
     3421 gcctcagaac acctcgattt cgggcgggcc gcctagcaga aagagctgat tttttgctgc
     3481 gcctgcccgg agccaaccct gtaaatctaa gtagatgaat ctactgtcct cccctttatt
     3541 tgtgtgatat aaacctcctt cgttatcctt ttacttcaaa atcagccctg agcgggcggg
     3601 cgtctctcca caggaggcac attgtcatct gaagctagga ccgggaagcg gttcccgctg
     3661 gaactgccca taaagatcca cggcaagcgc ggcgacgatg ccggcaccac ggcgaatatg
     3721 agcgcggccg gcgtttacat aatggccgat ctcgacctca cggtgggttc gccgattgag
     3781 tttgatatca ccttgcccgc cggtgttctg ggcactccca cagacgtgga agtgcgatgc
     3841 agcggccgtg tggtgcgcaa ggaatcaggc gcggcgtcca atggcaagcg aaagaaaaag
     3901 aacggcatcg cttgtgtgat tgaccagtac aagttcatgc gcaaggctaa aggaagcaaa
     3961 taaatgctga agatcatttt ggctgacaac caggcaattt ttcgtacagg ggcagcaaaa
     4021 gtcctggcgg ttgaagatga cttgcgtatc gtggcccagg ccgagaactc cgaaaaaatg
     4081 atgatggcgc tggaaaagtt ccacgccacc gtgatgatct tcggggccga catgcatccg
     4141 caactgcagg ccgtggtgga agcggcccgc aagtttaaaa cgcggctggt cctgattgcc
     4201 gataccggcc aggatgcgcg caacttcctg gccggcggcg tgcatggcgt gatctatcgc
     4261 aacgtcagcg gcgaatcgct ggtcgcgtgc gtgcgcaagg ttagcaaggg cgagacctgg
     4321 ctccaagaca cgcaggagag caaagagacg ctggagaatg atctggtggg cgcccgtgtt
     4381 cgcgaccgcc tgaccgccaa ggaactcaag atcgtggcgc tgatcgtgca agggtataag
     4441 aacaaggaaa tcgcgtcaca gctcggcacc acggagcagg tgatcaagaa ctatttgcgc
     4501 aacgtctatg acaagattgg agtttcagac cggctcgagc tggcgctgtt caccattcac
     4561 catcgcattc tggcagaagc tgccgcgacc tccgttgccg cggcgcagca aagataagca
     4621 ccactgaaat tcttgacttc tcaagagcgc gctagcggga tgcggcgcgc tcgctgcttt
     4681 tcagcaactc gttcacaatc gtgaccagct cttccgggtt gaccggcttt tccagataaa
     4741 ggtccgccaa cggctctgcc gcctgaaacg cctccgccac gaagccggag acgacaacta
     4801 caggcatgct gctgttgttc ttcgcggcct gaaccacggc gcggccgttt gcgtcgccca
     4861 gacgccagtc agtcaccacg gcgtcataga cgttattctg gattttttcc atggcatcgc
     4921 gggcagaagt ggaagcagtc acggtgtgac cggcctgctc cagaatggcg cacttcaaag
     4981 tcacaacatg cggttcatcg tcgacgcaca gaatcctggc cataataggc gtccttcaaa
     5041 gggtggcgaa gtagctacca gcgcaccgct tacacaagct gccctattct gcggcacgcc
     5101 tccgcagtaa gtcaaataac ccctttacgg ctgcttagat gcaggaagcc gctggtttgc
     5161 tgtttcagga actcaggtca ggggcttggg ccggaccagc caagcccctg aaaggcaaat
     5221 cccggctaga accgccacac cagccccacc gacggctggg cggtatgggt gaagttgtca
     5281 gaggccagac ccggaatctg gaagtcggga atcttgtaaa tcaggccgcg gtactcagcc
     5341 cggagcgcga cgaaccgggt cagggcaaag tccacgccgc cgccgtaaac gaaagcggcc
     5401 ttggtctgat tgttacccga accgttgccg attccgatca ggttgttgtt taagttgttg
     5461 gtaggacgga agaaaagccc tccgatgccc gccagcccgt aaggccgcac gcggctgctg
     5521 gaaggcgccg tgatcacggc ttcgcccgtc agcatatgga tgttcgtctg aacgtcagtc
     5581 tcaccgaaga gcgggtcgaa gtacttctgc gtgttgcgcg tgtagccgta gtcgccctga
     5641 atggcgaacc agcggctcag gttatagcga tatcccgcca gaaatccgcc gctcttggtg
     5701 gcgcgatgcg ggatgtctat attgtcggag ttcctggtca ggttcgccgt gccctgaatg
     5761 ctgacctcag aacggaaatc ctgggctgaa gccatgactg tggcagacag aatgatggca
     5821 gctgcagata agaaaagctt cttacgcatg gacttgcaca ctccaaagtt ttttaatttt
     5881 gagctgctct gttggaagcg aggcagaatc agggggctgc aaacgcttcc ccgacttgag
     5941 gattcttaac gctgcctagg ttcgaatgct tagcccggcc taagagatga gcaaaaactt
     6001 tgggccagaa tcgcgtgttg cgatttctgg cccaacatga cgattgaaga agaccaggtt
     6061 cttaccgcga ggcttctgtc cgcgtgttca tggtctggtt gatcggaccg gcatcgccga
     6121 tcttctccgc caccgacttg gcctgggtaa acagcagtag ataatccggg ccgccggctt
     6181 ttgaatccgt gccggacatg ttgaagccgc caaacggatg cgctcctacc atggcgcccg
     6241 tgcatttgcg attgaagtac aggttgccga cgtggaagtc atgccgtgcg cgctccagct
     6301 tctcgcgcga agttgagtaa accgcgcccg tcaagccgaa ctcgctgttg ttagcgatct
     6361 caagcgcttc atcgtagttg cgcgccttga tcacagccag caccggtcca aagatttctt
     6421 cctgggcaat gcgcgccgtc ggcgcgatat cggcaatcac cgtcggctgg atgaagtagc
     6481 cttcccccgc ttccttggcc gggccgccgc cattgatcac gcgtccttct ttcttgccga
     6541 cttcaatata ctcgaggatg ctcttgtagg ccttgtcgct caccaccggg cccacggcct
     6601 tgttctccac cggatcgccc acggcaatct ggttcacgcg gtccttcagg cgctccagga
     6661 acacgtcata gatcgtctcg tcaatgatcg cccgtgagca ggctgagcac ttctggccgt
     6721 tgaatccaaa cgctgcctgc gccacgcctt ccaccgcggc gtccaggttc gcgtcggcgt
     6781 ccaccacaat cgcgtccttg ccgcccatct ccagaaccac gcgcttgatc cacttctgtc
     6841 cgggattgtg cttggccgc
//
LOCUS       DASQYP010000137         7965 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_220860, whole genome shotgun sequence.
ACCESSION   DASQYP010000137 DASQYP010000000
VERSION     DASQYP010000137.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 7965)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7965)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7965
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_220860"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1522)
                     /locus_tag="VE783_04330"
     CDS             complement(<1..1522)
                     /locus_tag="VE783_04330"
                     /inference="COORDINATES: protein motif:HMM:NF012271.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fibronectin type III domain-containing protein"
                     /protein_id="HYX52653.1"
                     /translation="MVTFCLIAYTITVVGTAQTAVTPTTSTTQVAVSDPLDPITAPAG
                     GAVLYGTAINPSTNLPVRHLWVADAFLGICRVDPDLDSPGPYIVNSNACPLNVLPSIV
                     GGGMAFDSANSKLYFVDAQVKNSQGVFRINYHPEADGGQGSLDVSSLFSMAGAPAGQL
                     FPGGQTGCILPGNSGPPNSAALDPLGNLWVGFSKSSVIARFNSPANASTASIGSCSQF
                     VQQAATVAGNHFGTGLTFVGHDLWGSTLEIIYVIKNADTICMVGQNPACSSANGTAQL
                     ALSTLLGATGIASDQVYPATNGNNLYISDANSVAWVGNVMGGPAGQSLAATYVDPSIG
                     LANVGAVVVDGTDPANLVLYSGDDPSGVATPGAGRIFQTTQTSVAAAAPGAPLNVVAA
                     IGNGQGSVSWSPAQSAQPVASYTVHNNFASNGLPLPDITVTTGSSGFPATSTPLNGIA
                     PNSSYQFQVTASNAQGSSAPSTPSNLAPVIPIPDPPTNVVGIAGDTQVFVSWSAPLN"
     gene            complement(1839..4361)
                     /locus_tag="VE783_04335"
     CDS             complement(1839..4361)
                     /locus_tag="VE783_04335"
                     /inference="COORDINATES: protein motif:HMM:NF012271.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fibronectin type III domain-containing protein"
                     /protein_id="HYX52654.1"
                     /translation="MLYGSRISPITGQPVRHLWIGDTNFGLCRIDPDIDQGLATMAAN
                     PMLPSPFQVTITTCPFKLNGLSVTGGPMAYDPTTNNLYLVDEQTNSEGIFRLGFLTAG
                     DGGEGAIDFNNIFAMAGAITGSRFTGGTTGCPFPNDTVEGNPAPTVGKPNGAALSPDG
                     NLWVSFKKTGAILRINNPATATSTGFGTCNDFVQLVAETPAKGGGNGIAFIGPDLWGA
                     DAGGPFVIRNATRACQALTQSAPTTPTCGTSRPAGAFGALAPTTTFGDQTYPYQNGNN
                     LYFGNATDDLWVGNISGGGTIVVNPFEPAGTFVLNANPVVNVNAITADVTDPANNSVL
                     SGDDPSGNATLGAGRWWRVFQNAPAKADKPPQVTVTRATANVNDVTVAWSPAQSGQLV
                     TSYTVHASTVPAGVTVPDVTVVPPAGGSFPPNYVTIPSLPSGTYAFRVTANNAQGNNG
                     PANASNTVTLPYTPPPSIPTSVTATAGDTVAFVNFAAPPNAASQGITSYTITSLPGLF
                     TTTVGPTATSGTVTGLTDGTTYTFTVHANNAGGAGMESTPSNPVTPQAQPTVTIKLTG
                     PLSVTSVPIQSTYTATLTNNTATDVTATSFTYVLSQASPDGAFIVAATTGQGICTSGG
                     FGVVTLNCNIGTLAAGATVNVGIVVQIQTNAITGTASFSGTDVALNTVSGSSTLNTAT
                     PGAPPTGNPGPTVTVAVSASSAKPSMNRATSTTHTFVATNTSSTLANNLSFTISEPSQ
                     LTITGFTGVSSAPATDPISCSPPAPGVLNNQTVNNIVCTIASLGGNLKNGVKPNTAQT
                     ITLTVNITAPNNGPLNLPVQAQVVFDGIDAVSPTASFTQQVK"
     gene            complement(4931..5434)
                     /locus_tag="VE783_04340"
     CDS             complement(4931..5434)
                     /locus_tag="VE783_04340"
                     /inference="COORDINATES: protein motif:HMM:NF012521.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine phosphatase family protein"
                     /protein_id="HYX52655.1"
                     /translation="MRTIFLVRDAERASASKTDALSPAGTKRAECLANVLKDAGIRQV
                     FVNEIKTTQLTAAPIAKQLKLNPTVLPALDSGGLVRKAFYEGTGNSLVVADLESLPTI
                     AAKMKGGKAAITEGEYDKLFEITVMEGAATPLLTLHYCQATSTPTAVPSPTPRKSAPA
                     KKSTTKK"
     gene            5858..6724
                     /locus_tag="VE783_04345"
     CDS             5858..6724
                     /locus_tag="VE783_04345"
                     /inference="COORDINATES: protein motif:HMM:NF024545.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HYX52656.1"
                     /translation="MTQISKTQFDAMIAALGLTGNTMTNAAAQHNFAESYVTLLALAD
                     AAKKAGIDKDPQIVELMKVAQVRALAEGYRQYLQTRSENPSQDEIEAFYKQNTSKFEQ
                     VRLERVIIPPVSGRRVSGSAADAVKKVKDLAAESRERAIKGEDMNVLQKDVYKALGMT
                     APPDADMGQRRRGTLPATIEAELFALKPGEVSKLETEPAGYTIYRLRTRNVPPLAAVR
                     EEIIHDLRQGYVSNKIKAAEQQVTPKFNTDFFGSREDKSAVPATGNAAGAGNTVTSPA
                     SPKSPTAGANPR"
     gene            complement(6791..>7965)
                     /locus_tag="VE783_04350"
     CDS             complement(6791..>7965)
                     /locus_tag="VE783_04350"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52657.1"
                     /translation="AISPGTGTSYTVTLNGASGFASSVSFNVTGLPAGTNFTFAPPTL
                     VGSGTTALNITSDSTVVPATYPLTISATDGVTTRTTSVTLVVAPSGDFSISVTPSSAT
                     VIQGSSAGYGITISSIAGFNNVVVLNVTGLPTGATQVLSPNSVTGSGLLNLTINTTAS
                     TPAGSYPLTITGTSGALVHTATVTLVVLAPDFSVSATPASSTILVGQSTNYSVTLSAL
                     NGYTGTVSFSVTGLPSGATPTFTPTSLKNSGNTNLSIVTDGTIVPGTYGLMITGTDGV
                     LSHTSAVTLQVNAVPATDFTISAPATITVKRNSSGSETVTITPINGFNSPVTLTISGL
                     PALVTGSFSVNPVPGSGTSKLTFTVDRRQTQGTFPLTLTGTSGLQSHSVPITLTVN"
BASE COUNT         1653 a         2154 c         2405 g         1753 t
ORIGIN      
        1 tattcagcgg agccgaccac gagacgaata cctgggtgtc tcccgctatt ccaactacgt
       61 tcgtcggggg atcgggaatt ggaatgactg gagcaaggtt gctgggtgtg gaaggcgcgc
      121 ttgagccttg cgcgttactt gcagtgacct ggaattgata gctgctgttc ggtgcgattc
      181 cgttcaacgg cgtcgaggtg gctgggaagc cggatgatcc tgtcgtgact gtgatgtccg
      241 gcaggggcag cccattggac gcaaagttat tgtggaccgt gtagctcgcg accggctgcg
      301 ccgactgcgc tggactccaa ctgacggaac cctgtccatt gccgattgct gctacaacat
      361 tcagaggagc tccgggagcc gcggcggcca ccgacgtttg cgtcgtctgg aagatccggc
      421 cggctccagg ggtagcaact ccgctgggat cgtctcctga gtagagaacc aggttcgctg
      481 gatcagtgcc gtccaccacc acggctccaa cattggccaa tccaatagaa ggatcaacgt
      541 atgtggccgc cagactctgg cctgcaggtc cgcccatcac attcccgacc cacgcaacgc
      601 tgttggcatc gcttatataa aggttgttgc cattggttgc gggatagacc tggtcactgg
      661 caattccggt agcgcccagc aaagtggaaa gtgcaagctg agctgtgccg ttcgccgaac
      721 tgcacgcggg attttgccct accatgcaga tcgtatccgc gttcttaatc acgtaaatga
      781 tttccagagt cgagccccac aggtcatgac cgacaaacgt aagccctgta ccgaagtgat
      841 tgcctgcaac cgtggccgcc tgctggacaa actgcgagca gcttccgatg ctggcggtac
      901 tggcgttcgc cggcgagtta aaccgcgcga tgactgagct cttactgaag ccgacccaga
      961 gatttcccag cgggtccagg gcggcggagt tgggaggtcc agaattgccc ggcaggatgc
     1021 atcctgtctg accgcccggg aaaagctgcc ccgcaggcgc tccggccatc gaaaagaggc
     1081 tgcttacgtc aagcgagccc tggcctccgt cggcttccgg atggtaattg attcggaaaa
     1141 caccctgtga gttctttacc tgtgcgtcca caaagtacag cttgctgttc gcggaatcaa
     1201 aggccatgcc gccgccaacg atggagggaa gcacattcag cggacatgca ttggagttaa
     1261 cgatgtaagg gccgggggag tccaggtccg ggtcaacccg gcaaatgccg agaaacgcat
     1321 ctgctaccca aagatgacgt acaggcagat tagtgctggg attgatggct gtgccgtaga
     1381 gaaccgcgcc gccagcaggc gctgtgatgg ggtcgagcgg atcgctcacc gcaacttgtg
     1441 ttgtcgacgt tgtgggcgtt acggccgtct gggccgttcc cacaacggtg atcgtgtagg
     1501 caatcaggca gaaagttacc aagcgtttca gcctgcggaa acgagtgacg attggggccg
     1561 aggagttcaa aatagagctt cctttcattc caataactgt ccggaatatc tgcgattcga
     1621 ggagctccat ccgtaaactg ctcacgcata ccatcggcca aaggactctc cggaatggct
     1681 aagcatgcgt tctggcgtct taccactttc agttctcctg caaccaggga caaaaaaagc
     1741 gggctataaa atcagtgccc gctgctaggc aatatcggtt tcgcgaatct cgtgaaaccg
     1801 ggtgcccaga aagtttctgg acacccggcg gtttttcttt atttcacctg ctgagtgaag
     1861 ctggcagtcg gactcaccgc atcgattccg tcaaacacta cctgagcttg cacgggcagg
     1921 ttcagcggac cgttattcgg ggccgttatg ttcacagtga gcgtaatagt ctgcgccgtg
     1981 ttcggtttca ccccgttttt caggttaccg ccgagtgaag cgatggtgca gacgatgttg
     2041 ttcactgtct gattgttcag gaccccaggc gcgggcggcg agcagctgat cggatcagtt
     2101 gccggtgcgc tggaaacgcc cgtgaaccca gtaatggtga gctgggacgg ctctgaaatc
     2161 gtgaagctca gattgttcgc cagcgttgaa ctggtattcg tcgccacgaa ggtatgcgtg
     2221 gttgacgttg cccggttcat tgaaggcttc gccgaacttg cacttacggc tacggttacc
     2281 gtgggcccag gattgccggt tggcggcgct cccggagtcg cggtgttcag ggtcgagctg
     2341 ccgctcaccg tgttcagcgc cacgtccgtg ccgctgaaac tcgcggtccc agtgatcgcg
     2401 ttcgtttgaa tctgaaccac gattcccacg tttacggttg ctccggctgc cagcgtcccg
     2461 atgttgcagt tcagcgtgac tacgccgaac ccaccggaag tgcagatgcc ctggccggtg
     2521 gtggccgcca caatgaacgc tccgtccgga ctcgcctggc tcagaacgta agtgaagctc
     2581 gtcgcagtca catcggttgc tgtgttgttg gtgagtgtcg ccgtgtaagt ggactgaatg
     2641 ggcactgacg tgaccgaaag aggcccagtc agcttaatcg tgaccgtcgg ctgcgcttgc
     2701 ggagttacag ggttcgacgg agtcgattcc atgccagctc caccggcatt gttcgcgtgc
     2761 accgtgaaag tgtacgtcgt gccatcagtc aggcccgtta cggttccaga agtggcagtc
     2821 ggcccaacgg tagtggtgaa caagccgggt aatgaggtga tggtgtaact cgtgattccc
     2881 tggctggccg cgtttggcgg tgcagcgaag ttcacgaatg ccaccgtatc acccgctgta
     2941 gccgtgaccg atgtcgggat cgacggcgga ggcgtgtagg gcagagtaac cgtattgctt
     3001 gcattggcag ggccgttatt gccctgcgca ttattcgcgg taacccggaa tgcatatgtg
     3061 ccactcggga gactcgggat ggtcacatag tttggtggga aactgccacc cgcgggagga
     3121 accacggtga catcaggcac cgtcacgcct gccggaactg tcgaggcatg aacggtgtac
     3181 gaggtcacca gctggccact ttgggccggg ctccatgcca cggtcacgtc gttgacgtta
     3241 gcggttgcac gcgttaccgt tacttgcggc ggtttgtccg ctttcgccgg agcattctgg
     3301 aatacacgcc accagcggcc cgcgcccaga gtagcgttgc ctgatggatc gtcgccggag
     3361 agcacggaat tattagccgg atcggtaaca tctgcagtga tcgcgttcac gttcaccaca
     3421 gggttagcat tcaggacgaa tgttccggcc ggctcgaacg ggttaaccac aatcgtcccc
     3481 ccgcctgaga tgttgccgac ccacagatcg tccgtcgcat ttccgaagta gaggttgttg
     3541 ccgttctggt acggataggt ctggtcgccg aatgtggttg tgggagccag cgcgccaaaa
     3601 gcgccggctg gccgcgaggt cccgcaagtc ggtgtcgtcg gggcactctg ggtcagggcc
     3661 tggcaggctc tggttgcgtt gcgaattacg aatggtccgc ccgcatccgc accccaaaga
     3721 tcagggccga tgaaagcaat gccgttgccg ccgccctttg ccggggtttc ggccaccaac
     3781 tggacaaaat cgttgcaggt gccaaatccc gtcgacgttg cagtcgcggg attattgatg
     3841 cgcagaatcg cgcccgtctt tttgaagcta acccacaagt tcccgtcagg actcagagcc
     3901 gcaccattcg gttttccaac agtgggcgcc gggttcccct ctacggtgtc atttgggaaa
     3961 gggcaacccg tggtgccgcc ggtaaaacgg ctgccagtga tcgcaccggc catagcgaag
     4021 atgttattga agtcaatcgc gccctcgccg ccgtcaccgg ccgtgaggaa gccgagacgg
     4081 aaaatgcctt ccgagttcgt ctgttcatcg accagataca gattgttcgt ggtcgggtca
     4141 taggccatgg ggccgcccgt aaccgaaagc ccgttcaact tgaatgggca ggtcgtgatc
     4201 gtcacctgga aaggggacgg gagcattgga ttggctgcca tggtcgcaag accctggtca
     4261 atgtcgggat ctatgcggca caggccaaag ttcgtgtctc caatccacag gtgccgtact
     4321 ggctggcccg taatcgggct gattcggctg ccatacagca caatgccgcc ggtcggcgcg
     4381 gtaggaggat tggaaggagc aggaaaccca ggttgtattc cgaggatctg gcttgcagtt
     4441 gttggaggaa cagctgtggt ctgagcgttt gctgtcagcc ctagtgcaaa tacggctgtc
     4501 agaaaaatac aaacgccggc cacaaaattg ctgcccctaa gccgcgggcc tggtttggcc
     4561 gcaggacagg tagcgcgagt catggttaaa gccttcccgt ccccatgggc tatgccctgg
     4621 ggtactgttc attggttttt catccgtgac tgctgcgtcg tgaaagaacc tgttgggcgg
     4681 gtgaaaccgg aagtgctcct aaaacgctca cttgcgcggg gaccttgctc cggcacaggg
     4741 gagtcgtaat ttagttgtcc catactaggg ttggagcgat tagagaagca ttgacgcaag
     4801 attaaaaatc ttaagcttta agccgattta atcttataag tataagacga aggcgccatt
     4861 atgtcttatc tatttaagaa ttgtcgccac atgggcggat caggtacacc atccgccaag
     4921 gcagaaaggc ctatttcttt gtggtcgact tctttgccgg agctgacttc ctgggggtgg
     4981 gactcggaac ggccgtgggt gtcgaggtgg cttggcagta atgtaaggtt aggagcggag
     5041 tggccgcgcc ttccatgacc gtgatttcga acagcttgtc atactcacct tcagtgatcg
     5101 cagccttgcc acccttcatt ttggccgcga tggtcggcag gctttccagg tcggcgacga
     5161 ccagcgagtt tccggttcct tcgtagaagg ctttccgcac caaaccaccc gaatccagcg
     5221 cgggcaaaac cgttgggttc agcttgagct gcttcgcaat gggtgcagcg gtcaattggg
     5281 tggtcttgat ctcgttcaca aagacctggc gaatgccggc atcttttaag acattggcaa
     5341 gacattcggc gcgtttggtt ccggcaggac tcaacgcatc agttttggaa gcagacgctc
     5401 gttcagcgtc gcgaaccagg aagattgttc gcacgctctg ttgcgcagac gctgcggtgc
     5461 tgagcactag aagaatgata agagttcgca tagttgacct aggtaatgtg ccttagagaa
     5521 gctcgaaaac tccagaagtt acttctgttt ttgagctgtg ttctcgaaaa cgtgcgctaa
     5581 ccgtaacaga tgttggtatc atacttcaac tttccccgaa catcttgttc agcaaattca
     5641 gttgaggatg gtttcttgca tgcttcgttt gttgctgatt tccgctttga cgtgcgcctc
     5701 agcggtggcc caggtggccc aacgcccacc cgttccaccc gttacggggc accaacttgt
     5761 gtttcatccg gaaagggtga atcccgatac cgtcattctc gaagttcagg gcgtttgttc
     5821 tggattgggt agcggagctg taaaaaccga gccttgtgtg acgcagatta gcaagaccca
     5881 gtttgacgcc atgattgcgg cgctcggttt gaccggaaat accatgacca atgcggccgc
     5941 gcagcacaac ttcgccgaga gttacgtcac gctgctggct ttggcagatg cggcgaagaa
     6001 ggctggaatc gacaaagatc cgcaaatcgt ggaattgatg aaagttgctc aggtgcgggc
     6061 gctggcggaa ggttaccgcc aatatcttca aacccgctct gagaacccga gccaggatga
     6121 gattgaggcg ttctacaaac agaacacttc caaattcgaa caggtgcgcc tggagcgcgt
     6181 gattattccg ccggttagcg gtcgccgcgt gtcgggatcc gccgccgatg ccgtcaagaa
     6241 agtgaaagat ctcgctgcgg aaagtcgtga gcgcgccatc aaaggcgagg acatgaacgt
     6301 tcttcagaag gatgtttata aagcgctcgg tatgactgca ccaccggatg ccgatatggg
     6361 acagcgccgt cgtggaacgc tgcccgctac gatcgaggcg gagcttttcg cgcttaagcc
     6421 gggtgaagta tccaagcttg aaaccgagcc ggccggatat accatttacc gcctgcgcac
     6481 ccgcaacgta ccgccgctgg ctgccgttcg agaggaaatc atccatgacc tccgccaggg
     6541 ttatgtgagt aacaaaataa aagctgcgga acagcaggta acgcctaaat tcaacactga
     6601 cttctttggt tcgcgtgaag ataagtcagc agttcccgca acagggaatg ccgccggcgc
     6661 gggcaacacc gtcacttctc ctgcttctcc aaaaagtccc acggccggtg cgaatccccg
     6721 gtaatctata gtcattcaac aaaaaccgcc gggcagaatg cccggcggtt tttgttggtt
     6781 ggtgttaagg ctaattcacc gtcagcgtaa tcggcaccga gtgcgattga agcccggagg
     6841 tccccgtcag agtgagcggg aaggtcccct gggtctggcg cctgtccacc gtgaacgtga
     6901 gcttcgacgt gccgctgccc ggaaccgggt tcacgctgaa gcttccggtt acgagcgccg
     6961 gcagtccaga gatggtgaga gttacgggtg aattgaagcc gtttatcggg gtgatcgtca
     7021 ccgtttccga accgctggaa ttacgtttta ccgtaatcgt agctggcgcc gagatggtga
     7081 agtctgtcgc tggaacggcg tttacctgaa gagtcactgc cgaggtgtgg ctcagtacgc
     7141 catccgtgcc cgtgatcatc agtccgtacg tccctggaac aatcgttcca tccgtcacga
     7201 tggaaagatt cgtgttccct gaattcttca gagacgtggg ggtaaatgta ggcgtggctc
     7261 cggatggcag accggtaacg gagaaactga ccgtgccggt gtagccgttc aatgcgctga
     7321 gagtcacgct gtagtttgtc gattgtccca ccagaatcgt gctggatgcc ggggttgcgc
     7381 tgactgaaaa atcaggtgca agcacaacaa gcgtcacagt tgcagtgtgt acgagcgcgc
     7441 cgcttgtgcc cgtgatggtg agtggatagc tgccggccgg cgtactggcc gtggtgttaa
     7501 tcgtaagatt cagcaggccg gaacccgtaa cggagttcgg gctcaatact tgcgttgcgc
     7561 cagttggcaa tcccgtaaca ttcagcacca ccacattgtt gaagcctgcg atgctgctga
     7621 tcgttatgcc gtagccggcg cttgaaccct gaatcactgt tgcggagctt ggagtcacgg
     7681 agatactgaa atctccgctc ggcgccacaa ccagggtcac gctcgttgtc cgcgtggtca
     7741 caccgtccgt ggccgagatg gtcagcggat aagtagccgg gaccacggtg ctgtcactcg
     7801 tgatgttcag cgcggtggtg cccgatccga ccagcgttgg cggtgcaaag gtgaagttag
     7861 ttccagccgg cagtcctgtg acgttgaatg acacgctgga ggcgaagcca ctcgcgccat
     7921 tgagggtgac ggtgtaactc gtgcccgtac ccggagagat cgcct
//
LOCUS       DASQYP010000138         4430 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_133169, whole genome shotgun sequence.
ACCESSION   DASQYP010000138 DASQYP010000000
VERSION     DASQYP010000138.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 4430)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4430)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4430
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_133169"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..309
                     /locus_tag="VE783_04355"
     CDS             <1..309
                     /locus_tag="VE783_04355"
                     /EC_number="2.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family protein"
                     /protein_id="HYX52658.1"
                     /translation="LKEISRKHEQAELGYWIEEAQGGKGYVTEAARKMLRYGFRELGL
                     NRIQACYVARNVASGRILERIGMKQEGHLRQAAKKWDKFEDLLVWAILKEDFTERPER
                     "
     gene            312..1277
                     /locus_tag="VE783_04360"
     CDS             312..1277
                     /locus_tag="VE783_04360"
                     /inference="COORDINATES: protein motif:HMM:NF012472.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HYX52659.1"
                     /translation="MQTRKLGNSDLAITPIGVGAWAMGGGDWAFSWGHQEDQQSIAAI
                     HAALDAGVNWIDTAAIYGLGHSEEVVGKAIAGRSKRPYVFTKCGLVWNEQREISRSLK
                     ADSVRRELEASLRRLRVDAIDLYQIHWPDPEPEIEEGWQALAQAQKEGKVRWIGVSNF
                     SVAQMKRAQPIAPITSLQPPYNIVTADIEKEILPYCRQNNIGVIVYSPMKSGLLTGKM
                     TRERIAKLPPDDFRPRTPSFKEPLLTRNLGLVEVLRKIGERHNHTPGEVAIAWALRDP
                     VVTGAIVGMRSAEQAKEVLRAAEFRLSADEIGEIEGYLRANPVAA"
     gene            complement(1274..1666)
                     /locus_tag="VE783_04365"
     CDS             complement(1274..1666)
                     /locus_tag="VE783_04365"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52660.1"
                     /translation="MKKLLRYIELKSGHSDNGPAWIGYVTPSKTGRTLYFNGRALMKL
                     KGQRRGDSGGNYIDMVSGESFWVSGVKKNGQDRHWAGSGKVLVEAAAVREYLKAANAK
                     ALDTRFEVTNSIRETDIEKLSQLANSSP"
     gene            2123..2341
                     /locus_tag="VE783_04370"
     CDS             2123..2341
                     /locus_tag="VE783_04370"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52661.1"
                     /translation="MFLGHIGLAMVAKRVAPKTSLGTTLLATQFADCLWPLFLTIGIE
                     QVRIAPGITKMTPLDFVAYRGRTACSWM"
     gene            2332..2817
                     /locus_tag="VE783_04375"
     CDS             2332..2817
                     /locus_tag="VE783_04375"
                     /inference="COORDINATES: protein motif:HMM:NF016214.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal-dependent hydrolase"
                     /protein_id="HYX52662.1"
                     /translation="MDVIWAAAFAGIYFSLRRYRAGAWVVAVGVVSHWLLDWWSHRPD
                     MPLTPWSQQKYGLGLWNSVGGTLAAELILFFGGLFIYLSVTKSRDRTGTAALWALVIL
                     LVAIWLGNVFGSPPPSVQTIMWLTYVVWLIVAWAYWIDRHREVRARRVSLPRTLHPVD
                     L"
     gene            2851..3969
                     /locus_tag="VE783_04380"
     CDS             2851..3969
                     /locus_tag="VE783_04380"
                     /inference="COORDINATES: protein motif:HMM:NF012382.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HYX52663.1"
                     /translation="MISRRSFFKTAAVSAAAASLNLPGAELLSWAEPPRETGPNGPIL
                     LNSNENPYGPFPSVVGMPNPFLNANRYPDSSYEALVARLAKMHKVTPEHILVGCGSTE
                     ALKLATTAFTGPGRKLITATPTFEAVWFYAGATKADIVKIPLSTSYAHNLPLMATEAQ
                     KGGGLIYVCNPNNPTASLTPRRTIENFIRELPQGVYVLIDEAYHDLVTVSGDYISFLD
                     QPIENEHVIVTRTFSKIYGMAGLRLGYAVAAPETIRRMAEHRQEDTANIFALRCALKA
                     LDSHEEYEAAVQRNTNDRAAFMREAATRKIPVIPSWTNFVMVNALRPVKNVIEHFKQN
                     NIRIGRPFPPMDTFARISLGTPEQMKAFWAAWDKMPKA"
     gene            complement(4121..>4430)
                     /locus_tag="VE783_04385"
     CDS             complement(4121..>4430)
                     /locus_tag="VE783_04385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006935312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="integrase core domain-containing protein"
                     /protein_id="HYX52664.1"
                     /translation="LTDNGHCYRSHAFRAAVLQLGLHHHFTRPYTPRTNGKAERLIQT
                     ALREWIYACSYLNSQERNAQLLPWLHDYNWHRPHGSLKGASPISRAGLDRNNLLRLHR
                     "
BASE COUNT          916 a         1167 c         1418 g          929 t
ORIGIN      
        1 ctgaaggaga tcagccgcaa gcacgaacag gcggagctgg gttactggat tgaagaagcg
       61 cagggtggaa agggatatgt tactgaagcg gcgaggaaga tgctccgcta tggatttcgc
      121 gagctgggtc ttaatcgcat ccaggcctgc tatgtggcgc gcaatgttgc atcggggcgc
      181 atattggaaa gaattggaat gaagcaggaa ggacatctgc gccaggcggc gaagaagtgg
      241 gacaagttcg aagacctgct ggtgtgggcg atactgaaag aagatttcac tgagagaccg
      301 gagcgctgat tatgcagaca cgaaagctgg gcaactcaga cttggcgatc actcccattg
      361 gagtgggcgc gtgggcgatg ggcggcggcg actgggcatt ctcctgggga catcaggaag
      421 accagcagtc gattgcggcg atccacgcgg cgctggatgc cggcgtgaac tggatcgaca
      481 cagccgcaat ctacgggctg gggcattctg aagaagttgt cggcaaggcc atcgccgggc
      541 gctcgaagcg gccctatgtg tttaccaagt gcgggctggt gtggaacgag caacgcgaga
      601 tctcgcgtag cttgaaagcg gattccgtgc ggcgcgagct ggaggcgagc ctgcgcaggt
      661 tgcgcgtgga tgcgatcgac ctctaccaga tccactggcc cgatccggaa cccgagatcg
      721 aagagggctg gcaggcgctg gcgcaagcac agaaggaagg caaggtccgc tggatcggcg
      781 tttcgaactt cagcgtggcg cagatgaagc gcgcgcagcc gatcgcgccg attacgtcac
      841 tgcagccgcc gtacaacatc gtgaccgccg atatcgaaaa agagattctg ccttactgcc
      901 gccaaaacaa cattggggtg atcgtctatt cgccgatgaa gtcaggattg ctcacgggaa
      961 agatgactcg cgagcgcatt gcgaagctgc cgcccgatga tttccgtccg cggacgccca
     1021 gcttcaagga gccgctgctg acccgcaacc tggggctggt ggaagtgctg cgcaagatcg
     1081 gtgaacggca caaccacacg ccgggcgagg ttgcgattgc ctgggctctg cgggatccgg
     1141 tggttacggg cgcgattgtg ggtatgcgct ctgcggagca ggcgaaagag gtgttgcgcg
     1201 ctgcggagtt ccggctgagc gcggatgaga ttggcgagat cgagggttat ctcagggcga
     1261 atccggtggc tgcttagggg ctggaatttg ccagttgcga aagtttctcg atgtcagtct
     1321 cgcgaatgga gttggtaact tcgaaacgag tgtccagtgc tttagcgttg gccgctttca
     1381 ggtattcgcg gacggccgca gcttccacca gcacctttcc cgatccggcc cagtggcggt
     1441 cctgcccatt cttctttacg ccggaaaccc agaaggattc gccgctcacc atatcgatgt
     1501 agttgccgcc tgagtcgccg cgccgctgcc ctttgagctt catcagggcg cggccgttga
     1561 agtacagggt tctcccggtc ttggaaggcg tcacgtagcc gatccaggcg gggccgttgt
     1621 cggaatggcc gctcttgagc tcgatgtagc ggaggagctt cttcatcttg ttcagaagtg
     1681 tgccatacga gagtgaaagg cggctagaag ttagtttcga aaaaggggcg cagactatga
     1741 ctgggctgtg gctatgatgt tcatgagggc aagcctcttt ccaactgtcg cgctacagca
     1801 ccagacattg tgcacccccg agaccgcaac tggatggtca agcaacaaag cattcgcgag
     1861 gcgttttctg accgcggatg tacaaatttc tttatcggtt accagcttgc gagtgtattt
     1921 cacaagggcg gcgcgcaggg atgcagcgcg aagctgagaa atgtaagtgc caccgtcgaa
     1981 ttccaaaata acagtgaaga gggccacgat ggcatcaatt ctacttactg atgtccggag
     2041 atgaagcact tactccaagt actctgtcat ttcacgaaca acggcgcttg ccaagcaagt
     2101 tcacccttct tacattagtc ccatgtttct cggacatatt gggcttgcca tggtggcgaa
     2161 gcgcgtcgcg ccgaagactt ctctcggcac cacgctgctg gccacgcagt ttgctgattg
     2221 cctgtggccg ctgttcctga ccattggcat tgagcaggtg cgcattgcac cgggcatcac
     2281 gaagatgacg ccgctggact ttgttgccta tcgtggtcgc acagcctgct catggatgtg
     2341 atctgggcgg cggcgttcgc gggcatctat ttctctttgc gcagatacag ggccggcgcg
     2401 tgggtggtag ctgtgggcgt ggtgagccac tggctgctgg actggtggtc acatcggccg
     2461 gatatgccgc tgacgccgtg gtcacagcag aaatacgggc tcggattgtg gaattctgtg
     2521 ggcgggacgc tcgcggccga gttgatcctc ttcttcggcg gactgttcat ttatctttcg
     2581 gtgactaagt cacgcgatcg caccggcacg gcagcactgt gggcattagt aatcctgctt
     2641 gtggccatat ggctgggaaa tgtgtttggt tcgccaccac cctcggtgca gacaatcatg
     2701 tggctcacct acgttgtctg gctcattgtg gcgtgggcgt attggattga tcggcaccgc
     2761 gaggtaagag cgaggcgagt gtctcttccg cgaacgctgc atcccgttga tttgtagcca
     2821 agctggcagc cataaagtaa aatcccggcc atgatctctc gtcgctcatt tttcaaaacg
     2881 gccgccgtaa gtgcggctgc ggcttccctc aatctccctg gcgcggaact cctgagttgg
     2941 gctgagcctc cgcgtgaaac cggaccgaat ggaccgatcc tgctgaacag taatgagaac
     3001 ccatacggac catttcccag cgtggtcggg atgccgaatc cgtttctgaa cgcgaaccgg
     3061 tatccggatt cgagttatga ggctctggtg gcccggctgg cgaagatgca taaggtcacg
     3121 ccggagcaca tcctggtcgg ctgtgggtcc acggaggcat tgaagctggc gactacggcg
     3181 ttcaccggcc cgggacggaa gctgatcacg gctacaccaa catttgaggc ggtatggttt
     3241 tacgccggcg cgacgaaggc cgacattgta aagattccgc tgagcacaag ctacgcgcat
     3301 aacctgccgc ttatggcaac cgaagcccaa aaaggcggcg ggctgattta cgtctgcaat
     3361 cccaacaatc cgacggcaag cctcacgccg cgacggacga ttgagaactt cattcgcgaa
     3421 ctgccccagg gcgtttacgt gctgatcgat gaggcgtacc acgatctggt caccgtatcg
     3481 ggcgactaca tttcattcct ggaccagccg atcgagaacg agcatgtgat cgtgacgcgg
     3541 acgttctcca agatctacgg catggctggg ctgcggctgg gctatgccgt ggctgctccg
     3601 gaaacgatcc ggcgcatggc agagcaccgg caggaggaca cggccaacat ctttgccctg
     3661 cgctgcgcgc tcaaggcgct ggacagccat gaggagtatg aggcagcagt acagcgcaat
     3721 accaacgatc gcgcggcttt catgcgagaa gctgccacgc ggaagattcc agtgattccg
     3781 tcctggacca acttcgtgat ggtgaatgcg ctgcgcccag tgaaaaacgt aatcgagcat
     3841 ttcaagcaga acaacatccg gatcgggcga cccttcccgc ccatggatac ctttgcccgc
     3901 atatccctgg gaacaccgga gcagatgaag gccttctggg cggcgtggga caaaatgccg
     3961 aaggcatagc ttgtttgcgg ggtctgcatt cgattttcag tgttcatggt cgttgagggg
     4021 caccttttgc agtgcgaaca aatcgtcttt gatgtcgcac ctacggcgct tgatttttgt
     4081 attcctttga acccccggtt tcgctacgct ccaccggggg ctacctgtgg agtctcaaca
     4141 ggttgttccg gtcaaggcca gcgcggctga tcggagaggc gcctttgaga ctaccatgag
     4201 ggcggtgcca gttgtagtca tgcagccagg ggagaagctg ggcattgcgc tcctgggagt
     4261 tgagataaga gcaggcgtag atccactcac ggagggcggt ttgaatgagt ctctcagcct
     4321 tgccgttggt gcgaggagtg taggggcgag tgaagtggtg atgaaggccg agctgaagga
     4381 cagcggcgcg gaaagcgtgg gagcggtagc agtggccgtt gtcggtgagc
//
LOCUS       DASQYP010000139         6657 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_280308, whole genome shotgun sequence.
ACCESSION   DASQYP010000139 DASQYP010000000
VERSION     DASQYP010000139.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 6657)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6657)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6657
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_280308"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1711
                     /locus_tag="VE783_04390"
     CDS             <1..1711
                     /locus_tag="VE783_04390"
                     /EC_number="3.5.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF013927.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016811 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds, in linear amides
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="penicillin acylase family protein"
                     /protein_id="HYX52665.1"
                     /translation="EKKAAQNNLEPGSGFTNLKANFLARMISISGVLGVDSSCEGCVP
                     GSNNWVVSGAHTTTGKPLLSNDMHLPHRVPGVWYEAHLHSAGFNVEGFTLPGMPFVIV
                     GHNQRIAWGYTNLNPDVQDLFIENFNARGEYETPAGWKQPEKFHEVIHVKGKPDEHFD
                     VVVTRHGPIINQLLPGETRQIALQWLIYDTRAIDIPLFRLNSAQNWEQFHKALSTFAT
                     PSQNVVYGDVDGNIGYQPMGFMPVRASGDGTVPVSGADGKHDWTGYLDFDKLPAVYNP
                     PGGIIATANARITPSGYPYLLASQWFPPYRTERIYQVLRSGRKFSPADMLALQTDITS
                     NYDRLFAQEFAAAIAQSSKATDRTRQAAEILKQWDGRMEKDAAAPAIVAGARRALWEL
                     LLRAKLGDHWKQYEWSEQSVALENIITNKPARWLPPEYTNFNDLLTAAVHQGLKDAPP
                     DLKSWKYGEQYPVVINHPLFSVIPGMKGVAAPGTNPQSGGGMTVKQVGRGFGPSERMT
                     VDFSNLDGSTFNLVQGESGQLFSPYYMDHWDAWYNNRTFTLAFSDAAVQQTKAHALTL
                     EPK"
     gene            1734..2264
                     /locus_tag="VE783_04395"
     CDS             1734..2264
                     /locus_tag="VE783_04395"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52666.1"
                     /translation="MPDIPFTEYADRLQELLQQGYGIPVVTRDIPDPLTGDLNGAEID
                     LDYAITPELRLFLLAHLFGHTVQWNVNESSFDLGRQYKPPVDEKLFPHVVAYETEAAC
                     YGLSLLHQAGITDVDQWFSNYAATDQHYLLHFYRTGDKSEFKDFWQENAPLLQGKPIP
                     KFEPRKRTFRMDGVVI"
     gene            complement(2271..2576)
                     /locus_tag="VE783_04400"
     CDS             complement(2271..2576)
                     /locus_tag="VE783_04400"
                     /inference="COORDINATES: protein motif:HMM:NF009508.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YciI-like protein"
                     /protein_id="HYX52667.1"
                     /translation="MHYLLFYEVSDDYLARRGEFREAHLSAACQANARGDLVLGGALA
                     NPADTAILLFKGDSPKVAEDFASADPYVNNGLVKRWYVREWNTVIGELAINPVMPKA"
     gene            complement(2591..3604)
                     /locus_tag="VE783_04405"
     CDS             complement(2591..3604)
                     /locus_tag="VE783_04405"
                     /inference="COORDINATES: protein motif:HMM:NF016289.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M28 family peptidase"
                     /protein_id="HYX52668.1"
                     /translation="MNAYRLYFLPLLALCFFCAACEQNHTASAAPSAPAESPASGVSA
                     SPAKDATPVGPQLHIDANRAMQYVKEIVAFGPRWDGSPGQQKLGSYLHNKLKADGAEV
                     EDDAFTQQTPAEAIPMRNIIAKFPGSKDGVIVMGSHIDTNYPLRNTKFVGANDGGSST
                     ALLLAIGDQLRGRKLDGYSVWLAFLDGEESIPSERPGDLRWDDNQSLYGSRHLAQKWQ
                     QNGTIKKVKAFILADMIGDKDLEILRDQNSTPWLLDLVAQASRSLGYQSYFFAQNSGV
                     IDDHVPFQKAGAPVADIIDLDYGFNNAFHHTTEDTIDKLSAKSLQITGDVILETIRLI
                     NGR"
     gene            complement(3649..4470)
                     /gene="tatC"
                     /locus_tag="VE783_04410"
     CDS             complement(3649..4470)
                     /gene="tatC"
                     /locus_tag="VE783_04410"
                     /inference="COORDINATES: protein motif:HMM:TIGR00945.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_process: GO:0015628 - protein secretion by the type II
                     secretion system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocase subunit TatC"
                     /protein_id="HYX52669.1"
                     /translation="MPELEVAPPPISRFDEQELGTMGLLQHLEELRKRIMWSAASIAI
                     CFGVAWYKWEEIYALMRQPIEQALAAHKMDTHLSFLNPTDPFNLSLKLALITGIFIAC
                     PFLLYQVWMFISPGLYRKEKKFILPFLFLSVGLFLSGGLFGYKVVFPVALDFLIGTGA
                     QAGMRPVITITEYTDLFLTILLGLALIFELPIVLGFAGAMGVVNAKFLFKHIRGAVLI
                     FFVIAAILTPTTDIMNMTIYAAPMILLYFLSIGIVAIVHPRARRRRREKREQQGN"
     gene            complement(4463..4774)
                     /locus_tag="VE783_04415"
     CDS             complement(4463..4774)
                     /locus_tag="VE783_04415"
                     /inference="COORDINATES: protein motif:HMM:NF011430.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0015031 - protein transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocase TatA/TatE family
                     subunit"
                     /protein_id="HYX52670.1"
                     /translation="MNLGFPEMAFIVILAFMLFGPKKLPEIARTLGKFMAEFKKASND
                     FQGQIHEEIRKLELEDVDPRKHLEPTVAKLAEDEDLSLTGALNRLTDRIKNTVPQDYD
                     A"
     gene            5030..6655
                     /locus_tag="VE783_04420"
     CDS             5030..6655
                     /locus_tag="VE783_04420"
                     /inference="COORDINATES: protein motif:HMM:TIGR00225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S41 family peptidase"
                     /protein_id="HYX52671.1"
                     /translation="MSSGTRRSLFFVLLVIVICGFLGAGFSQRTAAVYGGAASDSEVR
                     DGLRQFSDVYSLVEQNYAEPVNADKAIYNGAIPGMLHVLDPHSNFFDPKSYSLLREEQ
                     SGKYYGVGMQIAPRNNKIIVVAPFVGTPAYRAGLRPGDVIMAVDAKPTDNLTVSDVAD
                     MLKGPKGTQVRITILREGNDKPLDFNVVRDEIPRNSVDLKFMIKPGIGYMHITAFNET
                     TEQEVEDALQQFGDLKGLVLDLRGNPGGLLNEGVGVADKFLKKGQIIVSHRGRSSPEK
                     TYRAPHGNSGKDYPLVVLVNRGTASAAEIVSGAIQDHDRGLIVGEVTFGKGLVQTVYP
                     LSENTGLALTTAKYYTPSGRLIQRDYNGVSLYDYYYARAEEDNPNTNANTSSSPKEVK
                     LTDSGRTMYGGGGITPDVKVPTFKPNKFEDSLLIKYAFFNFARHYLQGKHVDKNFDVS
                     DAVMQEFRKFLDAQKIPYTEADLHEGNDWIRSNVKAELFIAEFGQEEGLKVRAQSDPQ
                     VLAALNQLPKAKELAENARKIMAQRMSAAQQSR"
BASE COUNT         1537 a         1810 c         1898 g         1412 t
ORIGIN      
        1 ggaaaagaaa gcggcacaaa acaatcttga accaggcagc ggatttacga atttgaaagc
       61 aaatttctta gctcggatga tctcgatttc cggtgttctg ggcgttgatt cgagttgtga
      121 aggctgcgtg ccgggttcga acaactgggt cgtttctggg gcgcacacca ccacgggcaa
      181 gccgctgctt tccaatgaca tgcacctgcc gcatcgcgta ccgggcgtgt ggtatgaggc
      241 ccacctgcac tctgccggct tcaacgtgga gggcttcacg ctaccgggaa tgccattcgt
      301 gatcgttgga cataaccagc ggatcgcctg gggctacacc aatctaaatc cggacgttca
      361 agacctgttc attgaaaact tcaacgccag gggtgagtac gaaacgccgg ctgggtggaa
      421 gcagccggag aagtttcacg aagtgattca tgtaaagggg aagccggatg agcacttcga
      481 tgtggtcgtc acgcggcatg gtccaatcat caaccagtta ttgcccggcg agacgcggca
      541 gatcgcgctc cagtggctca tctatgacac gcgcgcaatc gacattccgc tgtttcgctt
      601 gaattcggcg caaaattggg agcaattcca caaggcgctt tctaccttcg ctactccatc
      661 acagaacgtt gtttacggag acgtggacgg aaacatcggt tatcagccca tgggattcat
      721 gccggtacgg gcttctggtg acggtacagt gccggtctca ggcgccgacg gcaagcatga
      781 ctggaccggc tatctggatt tcgacaagct gccggcagtt tacaacccgc cgggcgggat
      841 aatcgccacc gcaaacgcgc ggatcacgcc ttccggctac ccctacttgc tggcgagcca
      901 gtggtttcca ccttatcgca cggaacgcat ctaccaggtg ctgcggtccg gccggaagtt
      961 cagtccggcg gacatgttgg ctctgcagac cgatatcacg tcaaattacg atcgcctgtt
     1021 tgcgcaggaa tttgcggcag caatcgcaca gagcagcaaa gcgacggacc gaaccagaca
     1081 ggcagcggaa atcctgaagc aatgggatgg tcgcatggag aaggacgctg cagccccggc
     1141 aattgtcgcg ggtgcgcggc gagcgctctg ggagcttttg ctccgcgcca agctgggcga
     1201 tcactggaag caatacgaat ggtctgagca gagcgtcgct ctggagaaca tcatcaccaa
     1261 caaaccagcg cgctggctgc cacccgaata taccaacttc aatgatctgc tcaccgcagc
     1321 cgtgcatcag ggtctcaaag acgcaccccc tgatctgaag agctggaaat atggcgagca
     1381 atatcctgtg gtgatcaatc atccgctctt cagcgtgatt ccgggcatga agggcgttgc
     1441 ggcgcccggg actaatcctc agtccggcgg cggcatgacc gttaagcagg tgggacgcgg
     1501 cttcgggcca tcagaacgca tgacggtgga tttctcgaat ttagatggat ccactttcaa
     1561 tctggtgcag ggcgagtccg ggcagctctt cagtccttat tacatggacc actgggacgc
     1621 atggtacaac aacagaactt ttacgctggc attctcagat gcggcagtgc agcagacgaa
     1681 ggcgcatgcg ctgacacttg agccgaagta gacctcatgg tagaggaacg ccgatgcctg
     1741 acattccctt cactgaatac gctgaccgtc tccaagaact gcttcagcaa ggctacggga
     1801 ttcctgtggt cacacgcgac ataccggatc cgctcacggg agatctcaat ggggccgaaa
     1861 tcgacctcga ctatgccatc acacctgaat tgcggctctt tcttttagct cacctcttcg
     1921 gccataccgt gcaatggaat gtgaatgaga gttcgtttga tcttggtcgg cagtacaaac
     1981 cgccggtgga tgaaaagctg tttccgcacg tggtggcata cgaaactgag gccgcgtgtt
     2041 acggtctcag tctcctccat caggccggaa tcacagatgt ggaccagtgg ttctcaaact
     2101 atgccgccac ggaccagcat tacttgctgc acttctatcg cacgggcgat aagagcgaat
     2161 tcaaagattt ttggcaggag aatgccccgc ttttgcaggg caagccgatt ccgaagtttg
     2221 agccacgcaa gcgtaccttc cggatggatg gcgtggtgat ctgaagctgt tcaagccttc
     2281 ggcatgactg gatttatcgc aagttcgcca atcaccgtat tccactcacg cacgtaccag
     2341 cgttttacca aaccgttgtt cacgtaggga tcggcgcttg caaaatcttc agccactttg
     2401 ggcgaatcgc ccttgaaaag caggattgct gtatcggcag gattggccag cgccccaccg
     2461 agcacgaggt caccgcgtgc gtttgcctga cacgccgccg agaggtgtgc ttcccggaat
     2521 tcgccgcggc gcgctagata gtcgtccgaa acttcataaa agagcagata gtgcatggag
     2581 gcaccttgag ttagcgtccg ttgatcaggc gaatcgtttc cagaatcacg tcgccggtga
     2641 tctggaggct ctttgcactc agcttatcga tggtatcttc cgtggtgtgg tgaaaggcat
     2701 tgttgaatcc ataatccagg tcaatgatgt ctgccaccgg agcgccggcc ttctgaaaag
     2761 gcacgtggtc gtcaatgacg ccggaattct gggcaaaaaa gtaggactga tagcccagcg
     2821 agcgcgaagc ctgcgccacc agatcaagca gccatggcgt agagttctga tcgcgcagga
     2881 tttccaggtc cttatcgccg atcatgtccg ccagaataaa ggccttgacc tttttaattg
     2941 tgccattctg ctgccatttt tgggcaagat ggcggctacc gtaaagactc tggttgtcgt
     3001 cccagcggag atctccaggc cgttcagagg ggatggattc ctcaccgtca aggaatgcca
     3061 gccaaacgct gtagccgtca agtttccggc cgcgcagctg gtcaccgatg gccaaaagaa
     3121 gggcggtgct tgatcctccg tcattggctc ccacgaattt cgtgttgcgc agcgggtaat
     3181 tggtatcgat gtgcgatccc atgacgatca cgccgtcttt gcttcccggg aacttggcaa
     3241 tgatgttccg cattggaatt gcctcggcgg gagtctgctg ggtaaaggcg tcatcctcca
     3301 cctcagcacc gtcagctttg agtttgttgt gaaggtagga gccgagcttc tgctggccgg
     3361 ggctgccatc ccaacgcggc ccaaaagcga cgatttcctt cacgtattgc atggcgcgat
     3421 tcgcgtcaat atgcagctgc ggtccaaccg gggtggcatc tttggcgggt gaagccgata
     3481 ctccgctggc cggcgattct gcaggagcgc tgggtgcggc cgatgcggtg tggttctgct
     3541 cgcacgcagc gcaaaagaaa cagagcgcca gaagaggtaa aaaataaaga cggtaagcgt
     3601 tcacggatca gctccccgaa aacgcttacc agtctaaatg attattcgct agttaccctg
     3661 ctgttcgcgc ttctcgcggc gacggcgacg agcacgcggg tggacaatgg caacgatgcc
     3721 gatgctgagg aagtagagca gaatcatcgg cgccgcatag attgtcatgt tcatgatgtc
     3781 cgtggtcgga gtgagaatgg cggcaatcac aaagaaaatg agcaccgcgc cacggatgtg
     3841 cttgaacagg aatttggcgt tcaccacgcc catggcgccg gcgaagccca ggacgatggg
     3901 caattcaaag atcagagcca gaccgagcag gatggtgaga aagagatcag tgtactcggt
     3961 gatggtgatg accggacgca tccccgcttg agctccggta ccgatcagga aatcgagagc
     4021 gaccggaaag acaactttgt aaccgaacag tccgccgctc aggaacagtc cgaccgaaag
     4081 gaacaggaac ggcagtatga actttttttc cttcctgtaa aggccgggag aaatgaacat
     4141 ccagacctga tagaggagga aagggcacgc aatgaaaata ccggtgatca gcgccagctt
     4201 cagtgacaaa ttgaatggat ctgtcgggtt gaggaagctg aggtgcgtgt ccattttatg
     4261 cgcagccaga gcctgctcaa tcggctggcg cataagcgcg taaatttctt cccatttgta
     4321 ccaggcaact ccaaaacaaa tggcgatgct ggcggcggac cacatgatgc gtttacgcag
     4381 ctcttcaagg tgctgcagca ggcccatggt gccgagctct tgttcatcaa atctggatat
     4441 tggaggtggt gcaacttcta gctcaggcat cgtaatcctg cgggacggtg ttcttgatcc
     4501 ggtcggttag gcggttgagc gctccggtga gcgacaggtc ttcgtcctca gccagtttgg
     4561 cgaccgtcgg ctccagatgc ttgcgcgggt caacatcctc aagctccagc ttgcggatct
     4621 cttcgtggat ctgcccctgg aagtcattgc tggctttctt gaattcagcc ataaacttac
     4681 ccagggtacg ggcgatctcc ggcagctttt ttgggccaaa aagcatgaag gccaggatca
     4741 cgatgaacgc catttctgga aaaccgagat tcataagacg actgcgatca tcatacccca
     4801 attttcgtta gaagcagtcc cggatttgca ttaagttttc caatcacatg gtgacaaaac
     4861 agtgcgtcat agcgtcaaaa tctagcatct tagaattacg gaagtacagc gccgctcatc
     4921 ggttaccggc ggaacagtca ggtggccggg accaaaatcc agtggtgcta tacttgcagt
     4981 aagaagtcaa aggctttggg cattattaca gccaaaacaa ggacgattca tgtctagtgg
     5041 tactcgccgt tcactctttt ttgttctcct cgtcatcgta atttgtggtt tcttgggggc
     5101 cggcttcagc cagcgcacgg ccgcggttta cggtggcgca gcctccgatt ctgaagtccg
     5161 tgacgggctg cgccagttct ctgacgttta ttcgctcgtg gagcagaatt atgccgagcc
     5221 ggtaaacgct gataaggcga tttacaacgg cgccatcccg ggcatgcttc atgtgctgga
     5281 cccgcactcc aatttctttg atcccaagag ctactccctg ctacgcgagg agcagagcgg
     5341 caaatactac ggcgttggca tgcagatcgc cccgcgcaac aacaagatca tcgtggtagc
     5401 gcccttcgtg ggaacgccag cctaccgggc cggcctccgc cctggtgacg tgatcatggc
     5461 cgtggacgcc aagcccactg acaacctgac ggtcagcgac gtggcggaca tgctcaaagg
     5521 tcccaaaggc acacaggtgc ggattacgat cctgcgtgaa ggcaatgaca agccgctcga
     5581 tttcaacgtc gtccgcgacg aaattccccg caacagcgtt gacctcaagt tcatgatcaa
     5641 gccgggcatc ggctacatgc acatcaccgc ctttaatgag accaccgagc aggaagtgga
     5701 agatgccctg cagcagtttg gcgatcttaa gggtctggtg ctcgacctgc gcggcaatcc
     5761 cggcggtctg ctgaatgaag gcgtgggagt agctgacaag ttcctgaaga agggccagat
     5821 tattgtttcc caccggggcc gcagctcacc ggaaaagacc tatcgcgcac cgcacggcaa
     5881 ttccggcaag gactatccgc tggtggtgct ggtcaatcgt ggaaccgctt cggcagctga
     5941 gatcgtctcc ggcgccatcc aggaccatga tcgagggttg attgtgggtg aagtcacgtt
     6001 cggcaaaggt ctggtgcaga cggtttatcc gctttctgag aatacaggcc tggctctgac
     6061 caccgcgaag tactacacgc ccagcggccg cctgatccag cgcgactaca acggcgtttc
     6121 cctgtacgac tactattacg ctcgcgccga agaagacaac ccgaatacca atgccaacac
     6181 tagttcgagt ccgaaggaag tgaagctgac cgactcaggg cgcacgatgt acggcggcgg
     6241 cggcatcact ccggatgtga aggtgcctac cttcaagccc aataagtttg aagacagcct
     6301 gctcatcaag tatgcgttct ttaactttgc ccgccattac ctgcagggca aacacgtgga
     6361 caaaaatttt gacgtcagcg acgcagttat gcaggagttc cgcaaattcc tggatgcgca
     6421 gaagattccg tacactgaag ctgatctgca cgaaggcaat gactggattc gctccaacgt
     6481 caaggcggag ctgttcatcg ctgagtttgg ccaggaggaa ggactgaagg tgcgcgcaca
     6541 aagcgatccg caagtcttgg ccgcgctcaa ccagctcccg aaggccaagg aactggcgga
     6601 aaacgcgcgc aagatcatgg cgcagcgcat gtctgcggcg cagcagagcc ggtaaga
//
LOCUS       DASQYP010000140         7808 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_178200, whole genome shotgun sequence.
ACCESSION   DASQYP010000140 DASQYP010000000
VERSION     DASQYP010000140.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 7808)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7808)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7808
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_178200"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..533
                     /locus_tag="VE783_04425"
     CDS             <1..533
                     /locus_tag="VE783_04425"
                     /inference="COORDINATES: protein motif:HMM:NF013355.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52672.1"
                     /translation="YVRTVRRAVSIPLAVKLTAQADDPLGLAATAIDEGADMIVLSGR
                     VQGFMPDIETQEPILGSWGAIGGHWALPTSLYWVSKGWRNLPRKVSIIGTNGARSGND
                     VLRFLLSGAQAVEMASAAITNGAEIFSKIIGELQSYCERKQIARLEEIVGRAADKARS
                     YDQIEAREWSRFPWEG"
     gene            complement(574..1977)
                     /locus_tag="VE783_04430"
     CDS             complement(574..1977)
                     /locus_tag="VE783_04430"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52673.1"
                     /translation="MRSSSALCATSLVLALLVFAGAASGQQKTGVCTTIRPATVCANP
                     AGNQLCPNLPNDVNFKLNLTGYSTLLPECQQPFDDFSWQSFVALNWPLNDLTQPRPWE
                     TYIDPDQIFDPPQLQKMRSTLALTAAQNQKVKILYKMAKQHVLPGEPSTQFLQATGEP
                     LIDRNLNFALYEERVNPVWAKYVTGHNLNTLGGQAVFISAKKTVAFPVGHYLDDQKGT
                     GGAVGAMELKATWRILDPKKDNLQNFYTRKADIYMDADHTVNHKPLVVKGVIVGLVAL
                     HINTYTTDGKGSVWSTFEQEDNAPPQGKPEPGKTYSFFNPACPAATCPLNTAPARIGN
                     EKNYLWGTTAPYAQRYAYAGQFGTQVTVVNPFYPETEDTNARWHKLMPNTVWTHYRLI
                     GTQWVKGEVTSAEGIPTYLANSTLETYVPQNQSSCISCHASATLVPSPKPSADLSFLL
                     SHVPLLRTANKAAPKSK"
     gene            complement(2210..3136)
                     /locus_tag="VE783_04435"
     CDS             complement(2210..3136)
                     /locus_tag="VE783_04435"
                     /inference="COORDINATES: protein motif:HMM:NF016101.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016788 - hydrolase activity, acting on
                     ester bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alkaline phosphatase family protein"
                     /protein_id="HYX52674.1"
                     /translation="MKLVRIPVQLALFFAVLAMFGASRPAAAQTGSIKTVWIILMENH
                     NWSQIKGSSSAPYINNTLLPMASHAEQFFNPPSIHPSLPNYLWLEAGTNFGVLDDNAP
                     SSHHFSTTQHLVTLLQNKAISWKTYQENISGTTCPLTSSGEYAVKHNPFVYFDDVTNT
                     LNPNSAECINHVRPFTEFASDLANNNVAAYNFITPNLCDDMHDSCKPTRNPVKQGDTW
                     LSQNIPTILNSAAYKAGGAIFITWDEAATGDGPIGMIVLSPFAKGQGYSNTIHYTHGS
                     TLRTFEEIFGVTPLLGDAANQTDLKDLFSVFP"
     gene            4509..5435
                     /locus_tag="VE783_04440"
     CDS             4509..5435
                     /locus_tag="VE783_04440"
                     /EC_number="3.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013672.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide deacetylase family protein"
                     /protein_id="HYX52675.1"
                     /translation="MRLLKLLVLLSALSLFTGCSVSSRLSLGAESGVASGFGAASVAE
                     PMMAKEAAAPAAPPKVADTGGSSAGDKLIALTFDDGPRPYVLFGGKEHPGPGLADILD
                     QNRVKATFFVVGWRLTPKTWGERRHEENIGVSCLDAAGQLIKRGHELEDHTYSHVEMR
                     SAERKNGEQWVVGDVDKGAQAIKAVTGAQPRFVRPPDWIITSEVRRDLEHEGYRVLTI
                     SPENPMALRDVNSLDYLCAGKAVGCPKPSLVDGVMKQIEQREKKGTYSHILAFHELST
                     TSAAMPKLISDLKARGYRFVTLSEYMKVVGNR"
     gene            complement(5461..7530)
                     /gene="metG"
                     /locus_tag="VE783_04445"
     CDS             complement(5461..7530)
                     /gene="metG"
                     /locus_tag="VE783_04445"
                     /EC_number="6.1.1.10"
                     /inference="COORDINATES: protein motif:HMM:NF008900.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000049 - tRNA binding [Evidence IEA];
                     GO_function: GO:0004825 - methionine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006431 - methionyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methionine--tRNA ligase"
                     /protein_id="HYX52676.1"
                     /translation="MDKGKKFYITTPIYYVNARPHIGHAYTTLVCDAVARRKRLLGYD
                     TFFLTGTDEHGQKIERSATAAGTTAQKFADHVAAEFRGLFDRMNISYSDFIRTTEPRH
                     KQGVQELWKRLQEKGYIYKGTYTGQYCVSDEAYVDGAKPGDPCPDCGRITETVSEENY
                     YFKLSAMADKLLKHYQQNPDFIRPETRRNEVIAFVKGGLRDLSISRSTFKWGIPVPGD
                     PKHVVYVWLDALSNYATAVGFGSKDKEEQQKFERYWPVDVHMIGKEIIRFHCVYWPAF
                     LMAAELPLPNAIIAHGWLLFEESKMSKSRGNIVRAETVIDVLGNDALRYFLLREIVFG
                     QDGSFSFDAVVQRYNSDLANDLGNLSSRTLTMINRYFGGSVPYPSPLVAKKASDDVIR
                     EHAQATITEFNGLFDSYQFSRALETAWALVGSVNKYLVEQEPWIVAEKEGEENKARLA
                     TILYTAAEVLRIVTALAHPAIPESTAKIWNQLGLGDIDKFKLADLKWGQLPLGGKLGK
                     VEPVFPRADKSAIERMQQMEQERALEKERGQAPQAESATASAAVQPPATTSPAAPQPA
                     AVTTPPAAPAAAADGKISIDDFLKVEMRVGLVKHAERVKGADKLLRLEVDIGSEVRQV
                     VAGIALAYEPEKLIGRKVVIVANLAPRKLRGLESNGMIVAASVGDQGLPVLASFLEDV
                     PIGAKLK"
     gene            complement(7523..>7808)
                     /gene="larC"
                     /locus_tag="VE783_04450"
     CDS             complement(7523..>7808)
                     /gene="larC"
                     /locus_tag="VE783_04450"
                     /EC_number="4.99.1.12"
                     /inference="COORDINATES: protein motif:HMM:NF014072.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="nickel insertion protein"
                     /protein_id="HYX52677.1"
                     /translation="RQEDTQKLTKLIFAETTTLGVRMRNESRAVLARRHVEVATQWGK
                     IRMKIANLNGSVSNYAPEYEDCRRIAEGNRVPLKLVMQEAIKIYLEEKNG"
BASE COUNT         1592 a         2030 c         2467 g         1719 t
ORIGIN      
        1 agtatgtgcg tacggtgcga cgcgccgttt cgattccact ggcggtgaag cttacggcgc
       61 aggcggatga tccactcggg ctggcggcaa cggccattga tgaaggagcg gacatgattg
      121 ttctgtccgg acgtgtgcag ggctttatgc cggacatcga aacgcaagag ccgatcctgg
      181 gctcgtgggg cgccatcggc ggacattggg cgctgccgac gtcactttat tgggtgagca
      241 aagggtggcg taacctcccg cgcaaagttt cgatcatcgg caccaacggc gcacgatctg
      301 ggaatgacgt gctgcgattt ttgctcagcg gcgctcaggc ggtggagatg gccagcgccg
      361 ctatcacgaa cggtgcggag atattcagca aaatcattgg agaattgcag tcctactgcg
      421 agcgcaaaca gattgcgcgt ctggaagaga tcgttgggag ggcagccgac aaggccagaa
      481 gctatgacca gatcgaggca agagagtgga gcagatttcc gtgggaaggg tgagcacttg
      541 tctcggaccg cttaatcgat ctttagcacc ggctcatttt gatttcggcg cagctttgtt
      601 cgcagttctc agcaacggca cgtgcgagag cagaaagctc agatctgctg acggcttggg
      661 tgacggaacc agagtggcgg aagcatgaca gctgatgcat gaagactggt tctgcggcac
      721 ataggtttcc agggtgctgt tggccagata cgttggtatt ccttcggccg acgtcacctc
      781 gccctttacc cactgcgtgc caatgagccg gtagtgcgtc cagaccgtat tgggcatcag
      841 cttgtgccag cgcgcgttgg tgtcttctgt ttccggatag aaggggttca caactgtcac
      901 ctgcgttccg aactggccgg cgtaagcata tcgctgagcg tagggagcgg tggtgcccca
      961 gagatagttc ttttcgttgc cgatcctggc gggtgcggtg ttcagcgggc acgtcgccgc
     1021 ggggcatgcc gggttgaaga acgagtatgt ctttcccggc tcgggtttgc cctgcggtgg
     1081 ggcgttgtct tcctgctcaa aggtgctcca gacgctgcct ttaccgtcag tagtataggt
     1141 gttgatgtgc agcgccacca gcccgacgat tacgcccttt accaccagcg gcttgtgatt
     1201 tacggtgtgg tcggcgtcca tatagatgtc ggctttgcgg gtgtagaagt tctgcagatt
     1261 gtcttttttc ggatcaagga tgcgccacgt ggctttcaat tccattgcgc ccacggcgcc
     1321 gccggtgccc ttctggtcgt caaggtaatg gcctacgggg aatgcgacgg ttttcttggc
     1381 cgagataaac acggcctgcc cgccaagggt attcagattg tgcccggtca cgtacttcgc
     1441 ccaaacgggg tttacccgtt cttcatagag cgcgaaattc agattgcggt cgatcagcgg
     1501 ctcgccggtc gcctgaagga actgggtgga aggctctccg ggaagcacat gctgctttgc
     1561 catcttgtac aggattttga ctttctggtt ttgcgccgcc gtcaacgcga gcgtgctgcg
     1621 cattttttgt agctgcggcg gatcaaaaat ctggtcggga tcaatgtatg tctcccaggg
     1681 gcgcggctgg gtaaggtcat tcagcggcca gttcagggcg acgaacgatt gccaggagaa
     1741 atcatcgaag ggctgctggc actcgggaag cagagtgctg tatccggtaa ggttcagctt
     1801 gaaattgaca tcgttcggca ggtttgggca cagctgattg ccggccggat tggcgcaaac
     1861 cgtggccggg cggatggtgg tgcatacccc cgttttttgc tgccctgaag ctgcaccggc
     1921 aaaaacgagc agagccaaca ccagagacgt agcgcataaa gcagacgaag aacgcattcg
     1981 tgaatttctc ccgtccttgg gaatatagcg atgcgccggc gttgcgactg cgcgactgcg
     2041 aaaaaattac gattacagaa atgattgcag aagatttccc aggaagctca gagggactag
     2101 agcggcggtt tcctgaaccg cagcagataa tcgtgttttg atatcgggaa aagcaaaaaa
     2161 cgtccgcagc ggcgccgcgg acgttcccta aaaatgcaac atcagccgac tacgggaaga
     2221 cggagaacaa atctttgagg tcagtctggt tggcggcgtc gcccagcagc ggcgtgacgc
     2281 cgaagatttc ttcaaaggtc cgcagggttg agccgtgggt gtagtgaatg gtgttggagt
     2341 agccctggcc cttggcgaag ggtgagagca caatcattcc gatggggccg tcgccggtgg
     2401 cggcttcgtc ccaggtgatg aagatggcgc cgccggcctt gtaggccgcc gagttgagga
     2461 tggttggaat attttgcgag agccaggtat cgccctgctt aaccgggttg cgcgtgggct
     2521 tgcagctatc atgcatgtca tcgcacaggt tgggcgtgat gaagttgtaa gccgccacgt
     2581 tgttgttggc caggtcagag gcgaattcag taaacggccg cacgtggttg atgcactccg
     2641 ccgagttcgg gttcagggtg ttggtgacat cgtcaaaata gacgaaaggg ttgtgcttga
     2701 ccgcgtactc tccgctgctg gtgagcggac aggtggtgcc ggagatgttt tcctggtacg
     2761 tcttccatga gattgccttg ttctgaagca gcgtgaccag atgctgggtg gtgctgaagt
     2821 ggtgtgagct gggagcattg tcatcaagca cgccgaagtt ggttcccgcc tcaagccaga
     2881 gatagttggg caggctggga tggatggacg gcgggttgaa aaactgttca gcatgcgagg
     2941 ccatgggaag cagcgtgttg ttgatgtaag gcgcgctgct gctgcccttg atctgtgacc
     3001 agttatggtt ctccatcagg atgatccaga cggtcttgat gcttccggtt tgggccgccg
     3061 cgggccggct ggcgccgaac attgccagga ccgcaaagaa caaagccaac tgcacaggga
     3121 ttcttaccag cttcatggag tctctctttt cctttcaatt tgggacgccg cgcatctcgt
     3181 taacggaggg cgagacacgc tgcaaggagg gagggtagag ggagactgtg aagaagggct
     3241 taagcgcgta tgaatattgg ctgaaatcga gttttggcag ttccgttttg gaactggcgc
     3301 gaagcgaaaa gtttccaggg aggcagccca aaaatcgggt attcaggtga tcaggagatt
     3361 gagagtctgc cgcaaggcaa tgtacaaggt gagagccggt gttggctgca acgtgaggag
     3421 cgaacggtgg ccgttctttt tttattcgta aattcttctt gactttgaag ctgagttgtg
     3481 agagcatgca aagtgccgca cttggcgcgg cgttaatcga gtgcctaagt ttgggcagtc
     3541 ccacgcaaat tgccaagatt gccaaattga tgattcatcc cttgctggcc cccaaagctg
     3601 gtgagaagcc aataacctgc aagtcaaccc ccgctgtcgc tgttggaagt ccctagcaag
     3661 aagccttgta gcaaggagat cccggcacca atgtctaata cgggcctatt cttcggcttc
     3721 acaaaatgga acagctttta ccgctgaccg agcagagtgc gcagcgggaa cggtggggat
     3781 agaccgggac gacctcggga tcgattggga tatcccggcg ggacgaggcc gggacgaatc
     3841 gggacgaggt cgggatgaag tgggatgatg gaagaatcgg gagatctggt gacctgaaaa
     3901 ccagagtgtg ttgggccaca gagcagcacc gatgaacaca gaagaaagca atcagtaatt
     3961 tgcgattggt aaggcaagct tcccaggagg cgcccgcgat gagcgggtct tggatctttg
     4021 acaactagca aatagtaaat agcaattagc aattggccag agccgttttt gggcgattac
     4081 ttcggctctg gagtctatga gcaacctggt aaacatacgt gcccggacgg ccgaaactgc
     4141 gcgcaagatt cggaaatcac tccggggtgc ctcgagctaa ctcctttgtt ttcggggtgg
     4201 accggggact ccccggtgcc gtcgccggaa tcgccataat cggaagacaa gaacaatgcc
     4261 ttcaccgaaa tggggggcga agggcggcac aagacgttta gcggcgaatt tgcgcgtaag
     4321 aacacgaagg aaaaaagcga gcaaggtact ggaaaaccgg gtgcatgcac ctccgggtgt
     4381 gacgcccaac acggcaatcg tgttaaaaac tgagcaacga tccagagtag ctggttttgt
     4441 gtggtctccc cgtatctgag agtgaatttg cagttctggg atgaaccaaa aatcggggag
     4501 aactcaaggt gcgtctgctc aaattgctgg tgctgctgtc cgctctatct ttatttactg
     4561 gctgttcagt ttccagccgg ctaagccttg gagctgagtc cggggttgct tcgggctttg
     4621 gtgctgcctc agtcgccgag ccgatgatgg ccaaggaagc tgctgctcct gcggctccgc
     4681 ccaaggtcgc cgacacgggc ggctcttccg cgggcgacaa gctcattgcg ctgaccttcg
     4741 acgacggccc gcggccgtat gtgttgttcg gagggaaaga gcacccggga ccgggcctgg
     4801 ccgatatcct ggaccagaac cgtgtgaagg caactttctt tgtggtcggc tggcggttga
     4861 cacccaagac gtggggcgag cggcggcatg aagagaacat tggcgtgagc tgcctggatg
     4921 ctgccgggca gttgatcaag cgcggtcacg aactggaaga ccacacctac agccacgtgg
     4981 aaatgcggag cgccgagcgc aagaacggcg agcagtgggt ggtgggcgac gtggacaagg
     5041 gagcccaggc gatcaaggcg gttactgggg cacagccgcg gtttgtaagg cctccggact
     5101 ggatcattac cagcgaggtg aggcgcgatc tggaacatga aggttatcgc gtgctgacca
     5161 tctcaccgga gaacccgatg gcgctgcgtg acgtgaactc gctcgattat ctgtgcgccg
     5221 gcaaagcggt gggctgcccg aaaccgtcgt tggttgatgg cgtgatgaag cagatcgagc
     5281 agcgcgagaa gaagggtacc tattcgcaca ttctggcatt ccacgagctt tccacgacgt
     5341 cggcggccat gccgaagttg atcagcgact tgaaagcgcg aggctaccgc tttgtgactt
     5401 tgagcgaata catgaaggtc gtgggaaaca gataagcgaa tagactccca gcgatttccg
     5461 tcacttgagc ttcgctccga ttggcacatc ttccaggaag ctggccagca ccggcaggcc
     5521 ctgatcgcct acggatgccg ctacgatcat gccattcgac tccaaaccac gcagcttgcg
     5581 cggagcgagg ttcgcaacaa tgacaacttt acggccgatc agtttttccg gctcgtaagc
     5641 cagcgcaatt ccggcgacca cctgacggac ttcgctgcct atgtcgactt caagccgcag
     5701 cagcttgtcc gcgcctttta cgcgttcagc atgctttacc aggccgacgc gcatctcgac
     5761 tttcaggaag tcatcaatgc tgattttgcc gtcggcagcg gccgccggag cggcgggagg
     5821 cgtggttacc gctgcaggct gcggagccgc gggagaggtg gttgcgggtg gttggacggc
     5881 tgcacttgcg gtggcggatt ctgcctgggg cgcttgtccg cgctcttttt ccaacgcgcg
     5941 ctcctgttcc atctgctgca tcctttcaat cgcggattta tcggcgcgtg ggaataccgg
     6001 ctctaccttg cctagcttgc ctcccagcgg gagctggccc cacttcaaat cggccagctt
     6061 gaacttgtcg atgtcgccca gcccgagctg gttccagatc tttgccgtag actcgggaat
     6121 cgctggatgc gccagcgccg tcacgatgcg cagcacctca gcggcggtgt acaggatggt
     6181 ggcaagacgg gctttgttct cttcgccctc tttttcggcg acaatccacg gctcctgctc
     6241 caccagatac ttgttcactg agccaaccag cgcccaggct gtttccagcg cgcgcgagaa
     6301 ctggtagctg tcaaacagtc cattgaactc ggtgatggtc gcttgcgcgt gctcgcggat
     6361 aacgtcgtcg ctggctttct ttgccaccag tggtgaaggg taaggcacag agccgccgaa
     6421 atagcggttg atcatggtca gcgtacggct ggagagattg ccgagatcgt tggccagatc
     6481 ggagttatag cgttgcacaa cagcgtcaaa gctgaacgag ccatcctgcc cgaagacgat
     6541 ctcgcgcagc aggaagtaac gcagcgcgtc attaccgagc acgtcaatca cggtctccgc
     6601 acgcacgatg ttgccgcggg acttcgacat cttgctctct tcgaacagca gccagccgtg
     6661 cgcgatgatg gcattcggca gcggcagttc ggcggccatg agaaacgcgg gccaataaac
     6721 gcagtggaaa cggatgatct ccttgccgat catgtgcacg tcgaccggcc agtagcgctc
     6781 gaacttttgc tgctcttctt tatctttcga gccgaagccg acagcggtcg cgtagttgct
     6841 gagcgcgtcc agccagacgt aaaccacgtg cttggggtct cccggaacgg gaatgcccca
     6901 cttgaaagtg ctgcgagaga tggagagatc gcgcaggccg cccttcacaa aggcgatgac
     6961 ttcattgcgg cgcgtttccg gccggatgaa gtccgggttc tgctggtaat gcttaagcag
     7021 cttgtcagcc atggccgaga gcttgaagta atagttctct tcactcacgg tttcggtgat
     7081 gcgtccgcag tcggggcagg gatcaccggg cttggcgccg tctacgtagg cttcgtcgga
     7141 cacgcagtac tgcccggtgt acgtgccctt atagatgtag cctttttcct gcagacgctt
     7201 ccacagctcc tgcacgccct gtttgtggcg cggctcggtg gtgcggatga agtcgctgta
     7261 ggagatgttc atccggtcaa agagcccgcg gaactcggcg gccacatggt cggcaaactt
     7321 ctgtgccgtg gtgccggcgg cggtggcgga gcgctcaatt ttctggccgt gctcgtcagt
     7381 gccggtgagg aaaaatgtgt cgtagccgag caggcgcttg cgccgggcca cagcgtcaca
     7441 caccagtgtg gtgtaggcgt ggccaatgtg cggccgcgcg ttcacgtaat aaatgggcgt
     7501 tgttatgtaa aactttttgc ccttatccat tcttttcttc caggtagatc ttaatcgctt
     7561 cctgcattac cagcttgagc gggacccggt ttccttccgc gatgcggcgg cagtcttcgt
     7621 actcgggagc atagttgctg acgctgccgt tcaggttggc tatcttcatc ctgatcttgc
     7681 cccattgcgt ggcgacttca acatggcggc gcgccagaac tgcgcggctc tcattccgca
     7741 tacgcacgcc gagcgtggtg gtttcggcga agatcagctt cgtgagcttc tgagtgtctt
     7801 cctgccgg
//
LOCUS       DASQYP010000141        15214 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_280325, whole genome shotgun sequence.
ACCESSION   DASQYP010000141 DASQYP010000000
VERSION     DASQYP010000141.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 15214)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15214)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15214
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_280325"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            173..673
                     /locus_tag="VE783_04455"
     CDS             173..673
                     /locus_tag="VE783_04455"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52678.1"
                     /translation="MQRKLLFCLFVLGATLATAAPTFTIDLNALPEAVASRIHALGDK
                     YVIDHRINPFYLRGDFDGDGRVDYAVLLSERRTGKRGFVVLLSSQPRPQLLGAGTRVQ
                     YDSAKWDDLNFDSWRVYGKGKIDAGAGFEAPRGKGELILIQKTESASGFFRWSGTQFT
                     WVQQGD"
     gene            complement(740..3751)
                     /locus_tag="VE783_04460"
     CDS             complement(740..3751)
                     /locus_tag="VE783_04460"
                     /inference="COORDINATES: protein motif:HMM:NF017390.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M56 family metallopeptidase"
                     /protein_id="HYX52679.1"
                     /translation="MHPSSFTALILDTLIKGTLLLALTWCATLALRKRSAAARHMVHV
                     FALGALLLLPALVWVTPEWRIAGLPSFAAEIQPVKVAPALQPVVAATAAPVVEAGASM
                     QAKNEAKPKHAASIAARPQRIEPKIASASAQQAVNAVSDKTAVSAPLAEKPITQWKSY
                     LPASLLALWMSGVLLVLLRWRMNAARVAALVRRATVVTHSGWNAEIRNLSSELGLERE
                     VVLMASRELEVPITTGSVIPRIILPPDHCEWSATRRDAILKHELAHIKRRDTLTHAVA
                     QIAAAIYWFHPLVWLTVRAIRAERERACDDQVLSAGMKASDYAHELLDIVSGLREPEL
                     AAALAMARRSQLEGRVLAVLNPALPRSAVSRKTALGLAVLTVAIVVPLAALRPAGQAS
                     TPAAKQSSASKPSPASTSEISTAKPAAAALQASTPAAASSKNDDAEPAEAPEPPEVLA
                     AEEASRAAEAAVQSVPAVPGVPAVPATPAVPGVPAVPAVPGGPPVPGGELSLCGSTAK
                     LHNMNMETHDGDLRKWTATWQGDDCALDLHALGDIKFNAEATEIQGISQGGFFEINLR
                     QGANLKQVRVTPSGSGLQYVYKFNGTQQPFEGETRTWFSQLLLQLERTTGFAADMRVP
                     ALLAKGGPTAVLDEINNLQGDYVRGRYFRKLLEQPNLPAPIVLRVIKQSSDQIHSDYE
                     LARVLMTVGKEYDLPDEPSRTAFLNAAGKLNSDYEHSRVLIELLRRPNISKENVRLGL
                     GSAATLKSDYEKSRVLLSLTEQKAFEQAELDPYLKLVASIQSDYEKSRDLLAPLQKYK
                     LTQEQINRIMDTVAGMNTDYEKSRLLLALAKQGKFDEAQMSNYLKVVDSMHSDYERSR
                     DLLELMQNNTLSPASVSRAMENISKASSDYEKSRVLTTLVKANKFDETQMGTYLKVID
                     SMGTDYERSRSLLALMETNKLSTASIGKVIDAVKGIKTGYEKSRVLQKVAQNYQLEGA
                     LRESYIKAADSISSDYERTRAMAAVVKRATL"
     gene            complement(3756..4145)
                     /locus_tag="VE783_04465"
     CDS             complement(3756..4145)
                     /locus_tag="VE783_04465"
                     /inference="COORDINATES: protein motif:HMM:NF015898.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0045892 - negative regulation of
                     DNA-templated transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="BlaI/MecI/CopY family transcriptional regulator"
                     /protein_id="HYX52680.1"
                     /translation="MSNEKHQQLARRERQIMDVVYRHGRATVNGVLAELPDPPTYSAV
                     RGMLRLLEEKGFLRHEQEGLKYVYLPVDDTRQVRAHALRHMVRTFFGGSPEQAVAALI
                     EMSDTKLSSKDKQHLLQMIKKAQQEGR"
     gene            complement(4300..5421)
                     /locus_tag="VE783_04470"
     CDS             complement(4300..5421)
                     /locus_tag="VE783_04470"
                     /inference="COORDINATES: protein motif:HMM:NF024634.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S binding protein"
                     /protein_id="HYX52681.1"
                     /translation="MAPGLLNPPSTSIDENASVSPEKPARKKLVRRTDKDRSQQIRRG
                     VQIFFLLLNVWIGVQFYYWVRWAESGGQTAAVTRPSGVEGWLPIEGLMQFKYVLLSGR
                     LPRLHPAAFFLFTAFALSSLLLRKSFCSWICPVGTLSEYLWKLGRSVLRRTFHLPRWL
                     DLPLRSLKYILLSFFGYAVATMSAVAISEFVGSPYGLIVDVRMLNFFRFAGSTTLYVL
                     GALVLLSVVVQNFWCRYLCPYGALMGLIGLFSPAHIQRNESACIDCAKCAKACPSALP
                     VDRLIQIRSAECMACMECVAICPAKDALALKIAIPAKRRPAIAEWQMAAGIAVIFFGL
                     VGYAKFTDHWRTRVADAVFLKLVPVANEQSHPMIEDENR"
     gene            complement(5539..5925)
                     /locus_tag="VE783_04475"
     CDS             complement(5539..5925)
                     /locus_tag="VE783_04475"
                     /inference="COORDINATES: protein motif:HMM:NF013970.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PIN domain nuclease"
                     /protein_id="HYX52682.1"
                     /translation="MDTTVWIDYLGGTANLHTSWINRELTLQRLGLTDLILCEVLQGI
                     RDDAAFTQVHRDLLKFQVFSTGEVDLAVASAQNYRSLRKRGITVRKTIDCLIATFCLN
                     SGHSLLHRDQDYDPFEAHLGLQVIHP"
     gene            complement(5947..6153)
                     /locus_tag="VE783_04480"
     CDS             complement(5947..6153)
                     /locus_tag="VE783_04480"
                     /inference="COORDINATES: protein motif:HMM:NF021474.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system VapB family
                     antitoxin"
                     /protein_id="HYX52683.1"
                     /translation="MRTNIDIDDSLMREAMRTSGAATKKAAVEAGLRLLVQTFSQGAI
                     RKLQGKVRWEGNLKQSRLGRIRES"
     gene            complement(6264..8117)
                     /locus_tag="VE783_04485"
     CDS             complement(6264..8117)
                     /locus_tag="VE783_04485"
                     /inference="COORDINATES: protein motif:HMM:NF012770.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HYX52684.1"
                     /translation="MKTRWESCVFFLLMLLPGIWLLTSTLWPAETTVFAHNRVFGGQA
                     AQNSSPLAGEWQGMVSRLHLKIDIGSTGEGSYTGKLTSVDQGNITIPIDTITFANNSL
                     HFEMKSIAATYDGKMSENKMEIEGTWQQGGRSIPLVLRRPGAGAAAFTLKSTTMGRVA
                     LTPCRTPDGNTEGLCGKYEVFENREAKSGRKIALNIMVLPANAPKAEPDPFVPLAGGP
                     GQGAIEAFPLVGFVGKIRQHRDVVLVDQRGSGGSNPLPCVLRDPSDPQSMLGELIPIE
                     KLRACRAELEKKADLTQYTTSIWADDLDEVRQALGYEKINVFGGSYGTRAALVYLRRH
                     SDRVRTISLEGVVPPDYRLPVSFSRTIQDSVNKLLDRCATDETCKKEYPDLRKEFETV
                     VQRLDKEPAKFQLKTASGIQTVTLPRGGFIANLRPLLYVPEVVSQFPYFVHHAYKDDW
                     APYAYLAITIRDAIDKSIDRGLSFSVVCTEDVPGITEAMVRRDTAGTWLGDYQVRMFQ
                     KACETWPRGKAGNDVHAEVHSDVPALLVSGAFDPATPPQISVKEAKDFSNGRVVIVKD
                     GTHGTGSPCIDGLLSDFVAQGSAKGLDAACTDQIHLPPFLTEAQAEKAKGQ"
     gene            complement(8157..9209)
                     /locus_tag="VE783_04490"
     CDS             complement(8157..9209)
                     /locus_tag="VE783_04490"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52685.1"
                     /translation="MDKLILFYYAVIWGGSRVRGSVRRWKQPLVRGQEWFFNVRVLPG
                     FYEGGGKNLLNRYRLQMLATAAIEIPVAVALILTGHIPYLGWLILVMAAGVHVNHLFN
                     VEASERKARAFAVPGENQPVSAMLVPLQTRRLRDYNNPTIERLIFFGSFGAIAWLVRF
                     YLRSSGTHSFGLVFGMAIFLLYYQLGFVLMKIAVVQWSAPVPKIQAEEHLKAREQRRK
                     FYLHVADASRIMVTVGLVLWPFVVGAPAAQRELFVRVHFIVLMAIAVMFGIRHEMGRN
                     SVLRAAVRANPVRMPDLLNAQPAGWPVCYQPSTPTLLVRAARGYSLNLANRFTLLGAG
                     YLAGFFALIVILRMTQ"
     gene            complement(9215..9598)
                     /locus_tag="VE783_04495"
     CDS             complement(9215..9598)
                     /locus_tag="VE783_04495"
                     /inference="COORDINATES: protein motif:HMM:NF012610.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HYX52686.1"
                     /translation="MFLTISTDDARPIYQQVADGIKEFIARGELSEGTPLPPVRQLAA
                     DLGVNLNTIAIAYRELQKDGLITVRHGSGSVVASRTSNEREQSELLRPLRTALTELVL
                     AGLSPNKIEEIVARELQLVTKGSTK"
     gene            10117..12408
                     /locus_tag="VE783_04500"
     CDS             10117..12408
                     /locus_tag="VE783_04500"
                     /inference="COORDINATES: protein motif:HMM:NF019351.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005507 - copper ion binding [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="multicopper oxidase domain-containing protein"
                     /protein_id="HYX52687.1"
                     /translation="MSYIFLPKDASKARLRDAENARKNRLEIMKAYSQGKVSRRDLVK
                     WGLFTTAGALAPIGGLNPFVASSQGQISTSVRSPGGVFDIPTGMPRSPLFGVQAFSTP
                     MPRFDLIPRGNNPLGGDLTPTPQASSNQTQQPLDPALVNGQTGLTGPIEGRPPGDIWA
                     HQRFNQFLPQVSVEMSQAQAQTNFVYNPGVASNLNSGIDPTQPLPLKFHPQLPTQDPN
                     AVWTFNGTIPPKLVQARYGEPLLFRHHNKLPADITANNGFGRHTISTHEHNGHHGAEN
                     DGFTGAYFYPGQFYDYHWPVVLAGIFSGINQDATDPRAGSPADNGGINKVPGDWHETM
                     STHWFHDHMFSFTSQNVYKGNAAMFNIYSALDRGDETVNDGVNLRLPSGSSNGKGWGN
                     LDYDVNLMFADKAFDANGNLIMDIFNFDGFLGDVMTVNLTYKPFFEVERRKYRFRILN
                     AAVSRFFKYALVDASGTAQPIIQIANDGNLLPTPVVQTQSDEQGIAERYDWVIDFSKY
                     AIGAKLWFVNLAEHQNGKKPAKDLTISDALQPNQADPCVGKFLEFRVVRDPATPDVSQ
                     VPNVMIPNPDLSAVPIARERTFTFGSGASQPQNDPVTSFIVGSNNQPGPWGVQTNGNT
                     MLSADFGRLSAAPRFGTREVWTLQNGGGGWDHPIHIHFEEGQILARNGSASNVPAWEK
                     GRKDVYRLRPGGSVTLTMQFRDWGGMYMEHCHNTVHEDNAMLIRWEIDDAGTPFLRPL
                     PTPIPSPTGVTFEAPDDIDPTAF"
     gene            complement(12798..14075)
                     /locus_tag="VE783_04505"
     CDS             complement(12798..14075)
                     /locus_tag="VE783_04505"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52688.1"
                     /translation="MTRKLVVCLAAITLLAVCPCLFAQNLTDAAQAVVGPSTATGAVP
                     GISPQAIHAVPSDLIDDDSTNSGPSSIAGNPGGVPGVISVPNFTRSFTVGGTTFPFTM
                     IGNDPSLGHKTEVPAKIIAVSLQLLNADGSVLATVPAGEFEQPVLNSPNFQRFHYENT
                     GEPVQFADAVQRAEFFSTMDGNWHTNLNPATVVDRLTITVPKFVTVISRGVAVKALNY
                     QAGTLPDGHIFVLMLNLFFNQQLGNIVNQEIDAGNITTSDININLFPNTFLFSFNRAN
                     PLGRGACCTLGFHTYFTDLGTPEQRWVTIYASWISPGLFGGGFEDVTALSHEISESFN
                     DPFVNNITPVWQFPGEPGACQGNLETGDPVEVLAQGSFPVTLKKDGIPFTFHPQTEAL
                     LQWFAQTVPSDAIHGAYSYPDLTALTAPATLCK"
     gene            14455..14877
                     /locus_tag="VE783_04510"
     CDS             14455..14877
                     /locus_tag="VE783_04510"
                     /inference="COORDINATES: protein motif:HMM:NF014939.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016730 - oxidoreductase activity, acting
                     on iron-sulfur proteins as donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin-thioredoxin reductase catalytic
                     domain-containing protein"
                     /protein_id="HYX52689.1"
                     /translation="MPDVNPEQIEKMRNFVEKYCEKSGTFTHPDKTVTEAVVLGLAHH
                     RQTLGKPLCPCRFYPDKQEEIKHRTWICACDDMQIYKYCHCLLFVTPEGLPVTEYLPE
                     DHDGRKAYGLVKDPTPEKGRALRDKAAEREKERIERPS"
     gene            complement(14918..>15214)
                     /locus_tag="VE783_04515"
     CDS             complement(14918..>15214)
                     /locus_tag="VE783_04515"
                     /inference="COORDINATES: protein motif:HMM:NF018663.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HYX52690.1"
                     /translation="MALNGGPHFSFTPAISMFVNCESQEEVDDLWERLSAGGKKERCG
                     WLTDKFGISWQIIPSALGQLLADKDPQKSQRVMKAMLQMTKIEISKLKEAYEAA"
BASE COUNT         3167 a         4612 c         4242 g         3193 t
ORIGIN      
        1 tagtctcttg ataagagttc acgtgccgga cgctgcaagc gcagccggcg ggtcgcgcag
       61 ccttcaacat tctcgtgcgc ccctcgcgaa accgcgggtg ccctatcctt tgcgccgcaa
      121 ataccgtacc cgtcttgcac gctctcgaag cgcaaagggt gggctggaaa tcatgcaacg
      181 aaagcttcta ttttgcctct tcgtactcgg agcgactctc gctactgctg ctcccacttt
      241 taccattgat ctgaatgcgc ttccagaagc agttgcctca cgcatccatg ccctaggcga
      301 caaatatgtg atcgaccaca gaatcaaccc tttttacctg cgcggcgatt ttgacggaga
      361 tggccgcgtg gattacgctg tgcttctcag cgagcgccgc acgggaaagc gcggatttgt
      421 cgttctacta agctcacaac ccaggcccca gctccttggg gcaggaacgc gagtgcagta
      481 tgactctgcc aaatgggatg atctcaactt cgactcgtgg cgcgtatacg gcaagggaaa
      541 aatagatgct ggcgccgggt tcgaggcgcc cagaggaaag ggtgaactca tcctgataca
      601 gaaaacagag agcgcgagcg ggttctttag gtggtcagga acgcagttca catgggtaca
      661 gcaaggtgac tgaagcagcc aacctgccag tggaagaggt cacaaactat gtaaaccaat
      721 ccgaagaacg ctctgctctt tacagcgtcg cccgcttcac caccgccgcc atggcgcggg
      781 tgcgttcgta atcgctgctg atggaatccg ccgccttgat gtagctctcg cgcagcgcgc
      841 cctcaagctg gtagttctgc gccaccttct gcagcacccg cgatttctcg tagccggtct
      901 tgatcccttt caccgcatca atcaccttgc cgatcgacgc cgtgctgagc ttgttcgtct
      961 ccatcagggc gagcagtgaa cgtgagcgct catagtcggt ccccatggaa tcgatcacct
     1021 tcaggtacgt gcccatctgg gtttcgtcaa acttgttggc ctttaccagg gtggtcagca
     1081 cgcgcgattt ctcataatcg ctgctggctt ttgagatgtt ctccatggct ctgctcaccg
     1141 aggccggact gagcgtgttg ttctgcatca gctccagcag gtcgcgtgag cgttcgtaat
     1201 cggagtgcat cgagtccacc actttcaggt agttcgacat ctgcgcttca tcaaacttgc
     1261 cctgcttcgc cagcgccagc agcagccgcg acttctcata gtcggtgttc atgccggcca
     1321 cggtgtccat gatgcggttg atctgctcct gcgtgagctt atacttctgc agcggcgcca
     1381 gcaggtcgcg cgacttctca tagtccgact ggattgacgc caccagcttg agatatggat
     1441 caagctccgc ctgctcgaat gccttctgct ccgtcagcga gagcagtacg cgcgactttt
     1501 cgtaatcgct tttgagagtt gccgccgaac caagcccgag ccgcacgttt tctttggaga
     1561 tgttcggccg gcgtagcagc tcgatcagca cccgcgagtg ctcataatcg ctgttgagtt
     1621 tgccggctgc attgagaaat gccgtgcgtg acggctcgtc cggcaggtcg tattccttgc
     1681 ccacggtcat cagcacacgc gcgagttcat agtcggagtg gatctgatcg ctggattgct
     1741 tgatcacgcg cagcacgatg ggtgcgggaa ggttcggctg ctccagcagc ttgcggaaat
     1801 accgtccgcg cacgtagtcg ccctgcaggt tgttgatctc gtccagtacc gccgtgggac
     1861 cgcccttggc cagcagcgcc ggcacgcgca tgtccgcggc gaatccggtg gtgcgctcca
     1921 gttgcagcag caactgcgaa aaccacgtcc gcgtctcgcc ctcgaagggc tgctgcgtgc
     1981 cattgaactt ataaacgtat tgcaggccgc tgccggaagg cgtgacccgt acctgcttca
     2041 ggttcgctcc ctgccgcagg ttgatctcaa aaaatcctcc ttgcgagatg ccctggatct
     2101 ccgtggcttc ggcgttgaac ttgatgtcgc ccagggcgtg caggtcgagc gcgcaatcgt
     2161 ccccttgcca cgtcgcagtc cacttgcgca agtcgccatc gtgcgtctcc atgttcatgt
     2221 tgtgcagctt ggccgtggag ccgcacaggc tcagctcgcc tccgggtact gggggacctc
     2281 cgggcaccgc tggtaccgcc ggaactccgg ggacggcagg tgtggcgggc accgcaggaa
     2341 ctccaggcac agcaggtacg ctttgcaccg cagcctcggc cgcgcgtgac gcctcttccg
     2401 cagccaaaac ctcaggtggt tccggcgctt ccgcaggttc agcatcatca ttcttgcttg
     2461 aagccgctgc cggcgtggac gcctgtagcg ccgcggcggc cggtttggcc gttgatatct
     2521 ctgaagtgga agccgggctc ggcttgctcg cgctgctctg cttggccgca ggcgtgctcg
     2581 cctggcctgc gggacgcaac gccgcgagcg gcacaacaat cgcaacggtc agcactgcca
     2641 aacccagcgc ggttttccgc gagaccgcgc tgcgcggcag agccggattc aacactgcta
     2701 gaacgcggcc ttccagctgt gaccggcgcg ccatggccag ggccgcggcc agctcaggct
     2761 cgcgcaatcc ggaaacaatg tccagcagtt catgcgcgta gtctgaggcc ttcatacccg
     2821 cggagagcac ctggtcgtcg caggcgcgct cgcgctcggc gcgaatcgct ctcaccgtga
     2881 gccaaaccaa cggatggaac caatagattg ctgcggcgat ctgcgccacc gcatgtgtca
     2941 gagtgtcacg gcgtttgatg tgcgcaagtt catgcttcag aatggcgtca cgccgcgtcg
     3001 ccgaccattc gcaatggtcc ggcggcaaga tgatcctggg tatcaccgaa ccggtcgtga
     3061 tgggcacttc aagttcgcgg ctcgccatca gcactacctc tcgctccaga ccgagctcgc
     3121 tcgacaagtt acgaatctcc gcattccacc cggaatgcgt gaccacagtc gcgcgacgca
     3181 ccagcgcagc cacacgtgcc gcgttcatcc gccagcgcaa caacaccagg agcacgccgc
     3241 tcatccacag cgccagcagg gaagccggca agtacgattt ccattgtgtg atcggctttt
     3301 cagccaacgg ggctgataca gcagttttgt cgctgactgc attcaccgcc tgctgcgcgc
     3361 tcgcggatgc aatcttcggt tcaatcctct gcggtcgagc cgctatgctc gcagcgtgct
     3421 tcggcttcgc ctcatttttc gcctgcatgc tcgcacccgc ctcaacaacc ggcgcagccg
     3481 tcgctgccac aactggctga agcgcgggcg ctaccttcac gggttgtatt tctgcagcga
     3541 agctgggcag ccccgcaatc cgccattccg gcgtcaccca cacaagagct ggcaaaagca
     3601 gaagtgcgcc gagcgcgaac acgtggacca tatgccgtgc ggccgcagat cgtttcctca
     3661 gcgcgagcgt cgcgcaccag gtaagcgcga gcagcagggt tcctttgatc aacgtatcca
     3721 gaatgagtgc ggtgaaactg ctgggatgca tgttcttatc tcccctcttg ttgcgccttc
     3781 ttgatcatct gaagaaggtg ttgcttgtcc ttgctggaga gcttcgtatc ggacatttca
     3841 atcagcgcgg ccaccgcctg ctccggcgag ccgccgaaga acgttcgcac catgtgccgc
     3901 agcgcgtggg ctcttacctg gcgcgtatcg tccactggta gatagacgta cttcagccct
     3961 tcttgttcgt gccgcaggaa tcctttttct tccagcagcc gcagcattcc tctcaccgcg
     4021 gagtaggtgg gcggatcggg cagctcggcc aggactccat tcaccgtggc gcgcccatgc
     4081 cggtagacca cgtccatgat ctggcgctcc cggcgcgcca gttgttgatg cttctcgttg
     4141 ctcatgctcc tccgggcagg actgcaaacc tgctaataca ctagcacatg ctaatacatt
     4201 agcagaagtt gtcaagagct ttcctgaaga tttttgtgag tagaagagga tgatcgaatg
     4261 gctcctcgcg cgtcggtttg cgcgatagac gagagtcgct cagcggttct cgtcttcgat
     4321 catcgggtga ctctgctcgt tcgcgactgg caccagctta aggaagacag cgtccgccac
     4381 gcgagtccgc cagtggtcag taaacttggc atagccgaca aggccaaaaa agattaccgc
     4441 aatgcctgct gccatctgcc attcagcgat tgcgggccgt cgttttgctg gaattgcaat
     4501 cttaagcgcc aaggcgtctt tcgccggaca aatagccacg cattccatgc atgccatgca
     4561 ctcggcggag cgaatctgga tgagcctatc caccggcagt gcggaagggc acgccttcgc
     4621 acacttcgcg caatcaatgc atgcgctttc attgcgctga atgtgcgccg ggctgaagag
     4681 tccaatcagt cccatcagcg cgccgtaagg acagagataa cggcaccaga agttctgcac
     4741 caccacagag agcaggacca gcgcgccgag cacataaagt gttgtgcttc cggcaaagcg
     4801 aaagaagttc agcatccgta catccacgat cagtccgtac gggcttccta caaactcaga
     4861 gattgccacg gctgacatcg tcgccactgc atagccaaag aagctcagca ggatgtactt
     4921 gagcgatcgc agcggcagat caagccagcg cggcaggtga aaggtccggc gcagtacgct
     4981 acgccccagc ttccacagat actcagaaag cgttcctacc ggacaaatcc acgagcaaaa
     5041 cgatttccgc aagagcaggg aactcagcgc gaaggccgtg aacaaaaaga acgccgccgg
     5101 atgcagccgg ggaagccgtc cactgagcag cacgtacttg aactgcatca agccctcaat
     5161 cggaagccat ccctctactc ccgagggccg tgtgaccgcc gcggtctggc cgccgctctc
     5221 cgcccaccgt acccagtaat aaaactgcac cccaatccag acgttcagca gcaaaaagaa
     5281 aatctgaacg ccgcgccgaa tctgctgtga gcggtcttta tcggtgcggc gaaccagctt
     5341 cttgcgcgcc ggcttctcag gagagacgct tgcgttttca tcgatactcg tactcggagg
     5401 gtttaggagt cccggggcca taatcttcta agtaatgaag atagagtcgc cctcgggacg
     5461 agacctatga cttttgtcac gcagccaggt atcgttgctc gttcggggct gggcgtttca
     5521 cgggcgagaa tggaaccctt atggatgaat gacctgtaga ccgagatgtg cctcaaatgg
     5581 atcgtaatcc tgatcgcggt gaagcagaga gtgcccgcta ttcagacaaa acgttgcgat
     5641 gaggcaatca atcgttttac gaaccgtgat cccacgcttc cgcagggacc ggtagttctg
     5701 cgccgaagca acggccaagt caacttcgcc tgtactgaac acctggaact taagcagatc
     5761 gcgatgcact tgcgtgaagg ctgcgtcgtc ccgaattccc tgtaatactt cgcacaggat
     5821 caggtcggtc aagcccaggc gctggagcgt tagctcgcgg tttatccagg acgtgtggag
     5881 gttcgcggtg ccgcccagat agtcgatcca aactgtcgta tccactatga ccatattcgg
     5941 cgctggctac gattcccgaa tgcgtcccag gcgggattgt ttcagattgc cctcccagcg
     6001 caccttgcct tgcagcttgc ggattgcacc ctgagagaac gtctgaacca gcaagcggag
     6061 accagcctcc actgcggcct ttttggtggc agcgccgctc gtgcgcatcg cttcgcgcat
     6121 aagactatcg tcgatatcaa tgttcgtccg cacatgcccc ccttatgtgt aagaatctca
     6181 tatttttgtg tatccctcaa gaaaggattg ctctcggcgc gcctgagcac gaccgtgtta
     6241 ttcggggaag tacgcctgga tctttattgc cccttcgcct tctccgcttg cgcttcagtg
     6301 agaaaaggtg gcaggtgaat ctggtcagtg catgcagcgt cgagcccttt ggcggagccc
     6361 tgcgccacga agtctgaaag cagcccgtcg atgcacgggg aacccgtgcc gtgcgtcccg
     6421 tctttcacaa tcaccacccg cccgttgctg aagtccttcg cctccttcac tgaaatctgt
     6481 ggcggggtcg ccggatcgaa agcgccggag acgagcagcg caggcacgtc ggaatgtacc
     6541 tcggcgtgaa catcattacc ggccttgcca cgcggccagg tttcgcacgc cttctggaac
     6601 atccgcacct gatagtcgcc cagccatgtg ccagccgtgt cgcggcgcac catcgcttcg
     6661 gtgatgcccg gcacatcttc cgtgcagacc acggaaaaac tcagccctcg atcaatggac
     6721 ttatcgatcg cgtctctgat ggtaatggca agataggcgt atggcgccca gtcatccttg
     6781 taagcatgat ggacgaagta agggaactgg ctcaccactt caggcacata cagaagcggc
     6841 cgcaggttgg cgatgaagcc gccacggggg agagtaaccg tttgaatgcc gctggcggtc
     6901 ttcaactgga acttggcagg ctctttgtcc aggcgctgga ccaccgtttc aaactccttg
     6961 cgcaaatcgg gatattcttt cttgcatgtc tcatccgttg cgcagcgatc cagcagcttg
     7021 ttcacggagt cctggatggt gcgcgagaaa gaaacaggca gccggtaatc gggtggcacc
     7081 acaccttcaa gcgaaattgt gcgcacacga tcgctatgcc gtctcaagta gaccagcgcc
     7141 gctcgcgttc catacgaccc gccgaagacg ttgatctttt cgtagcccag cgcctggcgg
     7201 acctcatcca gatcgtcagc ccagatcgag gttgtatatt gcgtgaggtc ggccttcttc
     7261 tccagttccg cgcggcaggc gcgcagcttc tcgattggaa taagttcacc gagcatggat
     7321 tgcggatcgc tgggatcacg cagcacgcaa ggcagggggt ttgatccgcc gctgccgcgc
     7381 tgatccacca gcaccacgtc acgatgttgc ctgatcttgc cgacgaatcc caccagcggg
     7441 aatgcctcaa tagcaccctg gcccgggcct ccggccagcg gaacaaatgg gtccggctct
     7501 gctttggggg cgttagccgg cagcaccatg atgttcagcg cgattttgcg tccgctcttt
     7561 gcttcgcgat tttcaaaaac ctcgtacttg ccgcacagac cttcggtgtt gccgtccggt
     7621 gtgcggcagg gcgttagagc aacgcgcccc atggtggtgg acttgagcgt gaaggccgcc
     7681 gcaccggcgc ctggacgtct caaaacgagc ggaatggagc gccctccctg ctgccacgtg
     7741 ccctcaatct ccattttgtt ctcgctcatc ttgccgtcgt aagtggcggc aatgcttttc
     7801 atctcaaaat gcagcgagtt gttcgcgaat gtaatggtgt caattgggat ggtgatgttc
     7861 ccctggtcaa cgctggtcag cttaccggta tagcttcctt cgccggtcga accgatatcg
     7921 atcttcaaat gcagacgcga caccattccc tgccactcgc cggcgagcgg ggatgagttc
     7981 tgtgcagcct gccccccaaa aacccggttg tgcgcgaaga ccgtggtctc cgccggccat
     8041 agcgtggaag tcagcagcca tattcccggc aacagcatca gcagaaaaaa gacgcagctc
     8101 tcccatctcg ttttcatcga gtttctcctc ttacgacttt tggggccgat ttgtttctat
     8161 tgagtcatcc gcaaaatcac aatcagggca aagaatccgg ccagatagcc ggcgcccagc
     8221 agcgtgaagc ggtttgccag gttgagcgaa tagccgcgcg cggccctcac cagcagcgtg
     8281 ggcgtggagg gctggtaaca caccggccag cccgcaggtt gagcgttgag aaggtcaggc
     8341 atgcgcacgg gattggcgcg cacggccgct ctcaacacag agtttcttcc catttcatgc
     8401 cgtatcccaa acatcactgc gatcgccatc aggacaatga aatggactct tacaaagagt
     8461 tcccgctggg ccgctggcgc acccaccaca aatggccaga gcaccaaccc gacggtaacc
     8521 attattctgc tggcgtcggc aacgtggaga taaaactttc gcctctgttc gcgcgccttc
     8581 aggtgttctt ccgcctgtat cttaggaacc ggagccgacc attgcaccac ggcgatcttc
     8641 atcagcacga agccaagctg gtagtagagc aggaagatcg ccatgccaaa aaccaagccg
     8701 aagctgtggg tgccagatga tcgcagatag aacctgacca gccacgcgat cgcgccaaac
     8761 gagccgaaaa aaatcagccg ttcgatggtc ggattgttgt aatcacgcag tcggcgggtc
     8821 tgtaaaggca ccagcatcgc cgaaaccggc tggttctcgc cgggcactgc aaaggctcgc
     8881 gctttgcgtt ccgaagcttc cacgttgaac agatggttta catggacccc tgctgccatc
     8941 accaggatca gccagccgag atagggaata tgaccggtga ggatgagtgc caccgccacc
     9001 gggatttcaa tggccgcggt tgccagcatc tgcaagcgat aacggttcag cagattcttg
     9061 cctccgcctt catagaatcc gggcagcacg cgtacgttga agaaccattc ctggccacgt
     9121 accagcggct gcttccaccg gcgaacgctc ccgcgcaccc gagagcctcc ccagatcacc
     9181 gcgtaataga agaggatgag cttatccatt ggcattattt tgtacttcct ttcgtgacca
     9241 gttgcagctc ccgggcaacg atctcctcga tcttgttagg tgaaagtccc gccagaacca
     9301 gttccgtcag cgcagttcta aggggtcgta atagctcgct ttgttcgcgc tcgttactag
     9361 tccgcgatgc caccactgaa cccgagccat gcctcacggt gatcagtcca tctttctgca
     9421 gctcgcggta ggcgatcgcg atggtgttca ggttcactcc cagatcagcc gcaagctgtc
     9481 gcaccggcgg taggggtgtt ccttccgaca gttcgccccg ggcaatgaac tccttgattc
     9541 catcagctac ctgctggtat atcggccgcg cgtcgtcagt gctgatggtc aggaacatag
     9601 catgtatagt gtatacagac tgtatacaca tgaagtcaag cccggtatta ttaaaaaacg
     9661 ccttacaacg gtctcaggag ccgtcttctt ccggattggg tcataccaat aaacagccgg
     9721 ttttttccgc tttcagaaaa ctttcgcgat ccacgaatcg cagtgcgacc ttcatccata
     9781 tcgctgaaga ttaaagcttt ctttattaat cgccccggag aatggggatt tgaagatctt
     9841 aaagctatgc taagtcttag tattttcaga catttacggt gatctttctt tacattaaat
     9901 cttctaatct ttattgcttc cggggagggc gtgagctatc ttttggccgg cttacaaccg
     9961 taagacgggg cgaacccaag gctagaagcg ctccttcctt atggcccttc cgggcttaac
    10021 cgcaaagcaa gcctccgcgg acacttggtc tggcgagata gcaactgcca ttgctgtccc
    10081 actcgccaga cttacgcaat accaggagag cagcttatga gttatatctt tcttcccaag
    10141 gacgcctcca aagcgcgcct tcgggacgcg gaaaacgcga gaaagaaccg ccttgagatc
    10201 atgaaagcgt actctcaagg caaggtttcg cgtcgcgacc tcgtaaagtg gggtcttttc
    10261 acaaccgcag gcgccttggc tcccatcgga gggttgaatc ctttcgttgc cagctcgcaa
    10321 ggccagatca gcacttccgt tcgttctccg ggcggagtat ttgacattcc aaccggcatg
    10381 ccacgcagcc cgctgtttgg cgttcaggct ttcagtacac ccatgccgcg ttttgatctc
    10441 attccgcgcg gcaacaaccc gctcggtggt gatctcacac cgactccgca ggcttcctcc
    10501 aaccagaccc agcagcctct ggatccggcc ctggtcaacg gtcagaccgg cttaaccgga
    10561 cccatcgaag gccgtccgcc gggagacatc tgggcgcacc agcgcttcaa ccagttcctg
    10621 ccccaggttt cggtggaaat gtcacaggcc caggcgcaga ccaactttgt ctacaatcca
    10681 ggcgtcgcgt cgaacctgaa ctccggtatc gatcccacgc agccgttgcc actcaagttc
    10741 catccgcagc tgcccacgca ggacccgaac gcggtgtgga ccttcaatgg aaccattcct
    10801 cccaagctgg tccaggcccg ctacggtgag ccgctcctgt tccgccacca caacaagctg
    10861 ccggcggaca tcacggctaa caacgggttc ggccgccaca ccatttctac ccacgagcac
    10921 aatggccacc atggcgcaga gaatgacggc ttcacgggtg catacttcta ccccggccag
    10981 ttctatgact atcactggcc tgtagtgctt gcgggcatct tcagcggcat caaccaggac
    11041 gccaccgatc ctcgcgccgg cagcccggcc gacaatggcg gaatcaacaa ggtgcccggt
    11101 gactggcatg aaaccatgtc cacccactgg ttccacgatc acatgttcag cttcaccagc
    11161 cagaacgtgt acaagggcaa cgctgccatg ttcaacattt acagcgccct cgatcgtggc
    11221 gatgagaccg tgaatgacgg cgtgaacctg cgcctgccct ccggctcttc caacggcaaa
    11281 ggctggggca acctggacta tgacgtgaac ctgatgtttg ccgacaaggc gttcgacgcc
    11341 aacggcaacc tcatcatgga catcttcaac tttgacgggt tcctgggcga cgtaatgact
    11401 gtgaacctga cctacaagcc gttcttcgaa gtggagcgcc gcaagtaccg cttccgcatc
    11461 ctgaacgcag cagtgtcgcg cttcttcaag tacgccctgg tggacgcctc cggcacggct
    11521 cagccgataa tccagatcgc caatgacggt aacctgctgc cgactccggt tgtgcagact
    11581 cagtcggacg agcaaggcat cgccgagcgc tatgactggg tgatcgattt ctccaagtac
    11641 gcgatcggcg ccaagctgtg gttcgtgaac ctggctgaac accagaacgg caaaaaacca
    11701 gccaaggatc ttacgatctc tgacgctctc cagcccaacc aggcggatcc gtgcgttggt
    11761 aagttcctgg agttccgtgt ggttcgtgac ccggcaacgc ccgacgtgag ccaggttccc
    11821 aacgtgatga tcccgaatcc ggatctctcg gcggttccaa tcgcacgtga gcgtaccttc
    11881 accttcggct cgggcgcttc gcaaccgcag aacgatccgg tcacatcatt catcgtcggc
    11941 tccaacaacc agccgggacc gtggggagtg caaacgaacg gcaacaccat gttgagtgct
    12001 gatttcggtc gcctctccgc tgcgcccagg ttcggtactc gtgaagtctg gacgctgcaa
    12061 aacggcggcg gtggctggga tcacccgatc cacatccact ttgaagaagg ccagatactg
    12121 gcccgcaacg gcagcgcctc caacgtgcca gcgtgggaaa agggccgcaa ggacgtatat
    12181 cgtctgcgtc caggtggaag cgttaccctg accatgcagt tccgagactg gggcggcatg
    12241 tacatggagc actgccacaa cacggtccac gaagacaacg ctatgttgat ccgctgggaa
    12301 atcgacgatg ccggcacgcc gtttctgcgt ccgctgccga cgccgatccc gagcccgact
    12361 ggcgtcacgt tcgaggctcc ggacgacatc gatccgactg cgttctaacc gggtcaccac
    12421 cctcaaccaa cctttcggcg ggccgcgact tcaagtcgcg gccccgctgg aacgcacgct
    12481 gaagcatttg gtctagtcgc tccctcgggt acgctgctcg ttcttgtctt tcaaatctct
    12541 tccgcattcc tgcttttcgt acgatttggc tgcaattgac cgacttttac cggagagggc
    12601 ttttccttgg gagggatgct cctctcccgg tcgggctccc ggcacaccgt ccacttactc
    12661 cgtgtggctt ctcttgataa aaaaagtcag gtgcgccgcg tactatggtt tgttacctca
    12721 gaaccaatca gcgtttcatg gcgcaaaaca agagaggcgg gttgccccgc ctctcttggt
    12781 ggtgattcgg ctctagtcta cttgcacagc gtggctggtg cggtcagggc cgtcagatca
    12841 ggatagctgt aggcgccgtg gatcgcgtcc gaaggaacgg tttgcgcaaa ccattgcagc
    12901 agcgcttccg tttgcggatg gaacgtgaat ggaatcccat ccttcttgag cgttaccggg
    12961 aaagaaccct gtgcaagcac ttccaccggg tcgccggttt ccagattgcc ctggcaagca
    13021 ccgggctcgc cgggaaactg ccataccgga gtgatgttat tgacgaatgg atcgttgaag
    13081 gactctgaga tctcgtggct cagcgccgtc acgtcttcaa agccgccgcc gaacaggccc
    13141 ggagaaatcc agctggcata gatcgttacc cagcgctgct cgggcgttcc cagatcggtg
    13201 aagtaggtgt ggaagcccag cgtgcagcag gcgccgcggc ccagcggatt ggcgcggttg
    13261 aacgagaaga ggaaggtgtt cgggaacagg ttgatattga tgtcgctggt cgtgatgttc
    13321 ccggcatcga tctcttggtt cacgatgttc ccaagctgct ggttgaagaa caggttcagc
    13381 atcaggacga agatatgtcc atcgggcagg gtgccggcct ggtaattgag ggccttcacc
    13441 gcaacaccac gcgaaatcac ggtaacgaac ttcggtacgg tgatcgtaag gcggtcgact
    13501 accgtggccg gattcaggtt cgtgtgccag ttgccatcca tggtggagaa gaactcggcg
    13561 cgctgcacgg catcagcaaa ctgcaccggc tcaccggtgt tctcgtaatg gaaacgctgg
    13621 aagttgggcg agttcagcac cggctgctca aattcgccgg cggggaccgt tgccagcacg
    13681 gaaccatcgg cgttcagcag ctgcagcgat accgcgatga tcttggccgg tacttcggtc
    13741 ttgtgcccga gcgaaggatc gttgccgatc atcgtaaagg ggaacgtcgt gccgcccacg
    13801 gtgaaagacc gggtgaaatt gggcaccgag atgactcccg gaacgccgcc agggtttccg
    13861 gcgatgctgg aaggaccgct gttggtgctg tcatcatcga ttagatcaga aggaacggcg
    13921 tggatggcct ggggcgaaat ccccgggacc gctccggtgg cggtgctcgg cccgactact
    13981 gcctgggcgg catcggtcag attctgggca aacaagcagg gacagacagc gaggagggta
    14041 atcgctgcca gacaaacgac tagcttacgg gtcatgtggc tccttggatg agagacggtt
    14101 ttggaagcag gatcaaactg cgcacgcaag agtgcgatag ggaaccactc actgcagcgc
    14161 cccggaagtg gcgtcgaacg aagatgttca gcgccgatcg gctgggtcag gaaggtactt
    14221 gcctgtgcgt ctcggccgct aaatacctgg ctccagtaag ttacgctcgt aatcctgatt
    14281 tgtaaatatc tgattcgcgt tgccgaatga aaatcctgca caacaagaac gtcccattga
    14341 gctccaacca agagaaaacg ccgcggccgc gcttctgaat ggccgttcaa tcttgccatg
    14401 atcaggagct cacctgtagt ctgttgaaaa attgtcaagg agttaaagaa actgatgcct
    14461 gacgtgaacc cagagcagat cgagaaaatg cgcaatttcg tggagaagta ctgcgagaag
    14521 tcgggcacct tcacccatcc ggataagacc gtgaccgaag cggtggtgct tgggctcgct
    14581 caccatcgcc agaccctggg caagccgctg tgcccctgcc gtttttatcc cgacaagcag
    14641 gaggaaatca agcatcggac atggatctgc gcttgcgatg acatgcagat ctacaagtat
    14701 tgccactgcc tgctcttcgt tacgccggaa ggtctgcccg tcaccgaata cctgccggaa
    14761 gatcacgatg gccgcaaagc gtacgggctg gtcaaggacc ccacgccgga aaaaggccgc
    14821 gcgctgcgtg acaaggcagc cgaacgcgaa aaggaacgca tagagcgccc gtcataaatt
    14881 tactgtgccg agagctctgt ggatacgcgg agcgggctta agcggcctcg taagcttcct
    14941 tcaacttgct gatctctatc ttggtcatct gcagcatcgc cttcatcacg cgctgcgatt
    15001 tctgcggatc tttgtccgcc agcagctgtc ccagagcgga cggaatgatc tgccacgaaa
    15061 taccgaactt atccgtaagc cagccgcagc gctccttctt tccaccggcg gagagcctct
    15121 cccacaaatc atcaacctct tcctggctct cacagttcac aaacattgaa atggccggcg
    15181 tgaaactgaa atgaggtcct ccattcagcg ccat
//
LOCUS       DASQYP010000142         6884 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_221083, whole genome shotgun sequence.
ACCESSION   DASQYP010000142 DASQYP010000000
VERSION     DASQYP010000142.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 6884)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6884)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6884
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_221083"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..336)
                     /locus_tag="VE783_04520"
     CDS             complement(<1..336)
                     /locus_tag="VE783_04520"
                     /inference="COORDINATES: protein motif:HMM:NF018028.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RDD family protein"
                     /protein_id="HYX52691.1"
                     /translation="MDKLTIETPEQVQLEFVLAGIGSRFMALLLDTLVQSVLFLILFI
                     FVITVAANPFTSGGRIWVIAIGFLIGFVLYTGYFAIQEAVWKGQTLGKRWAGIRVIKD
                     SGRPITPFEA"
     gene            339..1316
                     /locus_tag="VE783_04525"
     CDS             339..1316
                     /locus_tag="VE783_04525"
                     /inference="COORDINATES: protein motif:HMM:NF014052.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="stage II sporulation protein M"
                     /protein_id="HYX52692.1"
                     /translation="MISAHWLEKRQNHWKRLESLLDQARNNGLASLTRLELQELGLLY
                     RQAAADLSALREDPSGRTYSRTLNLLLSRAHNTIYSAQKSSTKGIVHFYGSIYPQIFR
                     RNLNLIGIAFALFVIGGLAGTLLSAIHPEFMHLFLGPGMMETIEHHKMWTDSVVSIKP
                     AASSMIMTNNLMVSFAAFAYGITFGLGTFYMMVFNGVLIGVVGVACWMGGMSLPLWSF
                     VAPHGVIELPAIFVAGGAGFRIAQGMLFPGMLSRRDSLAKAGGEAVRLLLGTIPMLIV
                     AGLIEGFISPSPNIPPRWKFTLAAAVATVFSSYLFFCARGGVREEYVKN"
     gene            complement(1350..2726)
                     /locus_tag="VE783_04530"
     CDS             complement(1350..2726)
                     /locus_tag="VE783_04530"
                     /inference="COORDINATES: protein motif:HMM:NF024909.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF58 domain-containing protein"
                     /protein_id="HYX52693.1"
                     /translation="MATPALIPATVSAPAKQTRTLGFGFGSRFFLLISVGLLWAVPAF
                     WDRRFLLVMLAWDACAVVAWLVDLLSLPRPHQLIIQRSWGGAPSLSNNVEVTLEVQNR
                     SSAYVECRVMDDIPAALRSTPPQLQIRTAKRDSAVAQYLARPLQRGDVELKSTWLRYQ
                     SGAHFAERWARADIAQTIRVFPDLEEARRHNIYLSRARQIELEKRLIRQRGVGREFES
                     LREYQPGDEFRNICWTATARRGKHVTKLFQVERSQAVWIVMDAGRLLRARVGELTKLD
                     LSVNAALSLAQIALYSGDRTGLLVYGRDIQQRVGLGRGLRHMRALLEALASAKEEVAE
                     ADHLRAAAALMQLQRQRSLIIWVTDLADTSMTPEVIESASQILSKHLLLFAVIAQTDL
                     QQMAARSPKDEEDMFAVAAAQELVQRREQLIAKIRNRGALALEIAPSRLTTTLVNQYL
                     EVKERNLI"
     gene            complement(2730..3677)
                     /locus_tag="VE783_04535"
     CDS             complement(2730..3677)
                     /locus_tag="VE783_04535"
                     /inference="COORDINATES: protein motif:HMM:NF040105.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MoxR family ATPase"
                     /protein_id="HYX52694.1"
                     /translation="METVSRVLNHGRTELGKVIVGQSELINQCLLTILCGGHALLEGV
                     PGIAKTLVIKCFSRLFDLEFRRVQCTSDLMPADIIGSNVLNLASSTFSLHRGPLFTDM
                     LLADEVNRMPPRTQAALLEAMEERQITIDGVPHRLSEFFTVFATQNPIEFEGTYPLPE
                     AQLDRFLMKIRVDYPQADQEIAILEQHHRGFDTHNLDAAQIQALPTDLLAQARAEVRN
                     TKVEPALFQYIVSIIRRTRDWPSLGMGASPRAAISLMQVAKAAAALEQRDYLIPDDVK
                     ASVLPVLRHRVMLKPEAELEGQDSDQALKEIVGTVEVPK"
     gene            complement(3637..4851)
                     /locus_tag="VE783_04540"
     CDS             complement(3637..4851)
                     /locus_tag="VE783_04540"
                     /inference="COORDINATES: protein motif:HMM:NF025617.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4350 domain-containing protein"
                     /protein_id="HYX52695.1"
                     /translation="MPLNIAPGDRKLLLWTGAILVPLVIALAILSSADQEDSGVPSTY
                     SSQSQGAKAAYLLLQELGYKVQRWELPPAELPINPSGTILVLANPGLANPSDRNQRLA
                     LETFLARGGRILFTGCMPELLLQQASVEMESAPSPLWKSYKPELLTGLSHEGDIRLSP
                     NCYWQHSVPPYLAHYADKGRPIVVSYPVGKGQVIWWASSIPLSNAGIREAGNMGLFLG
                     SLGDRDNTQILWDEYYHGERASLRSYMADPPILFGLLQCVFLFAAVVFTYSRRNLPIH
                     PAPEGTRLSPLEFVETVGNLYRKAKATHAALEVPYQRFRFAATRRLGLRPETSNSDLV
                     RALRERTGYKDPSLEGLLGRIETELYAQPSEKTVLELVQELNRHMRNLKLLPEETIIH
                     GNRVPGTEPRTN"
     gene            complement(4842..5795)
                     /locus_tag="VE783_04545"
     CDS             complement(4842..5795)
                     /locus_tag="VE783_04545"
                     /inference="COORDINATES: protein motif:HMM:NF024948.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4129 domain-containing protein"
                     /protein_id="HYX52696.1"
                     /translation="MNLSSKTAILAVVLLATAVPAIAADISVSEYRQQVRYYSSRIEA
                     LSEHPEHAGGLAKDIPESLTVNTPRGPSAVSLKPLKDAVATFSASSDAEKPAKLEQIK
                     KYMAALSREAESYDRPADFTDGRQKLNAILQRREFNNVRPPGIREALLDRIYRWIWRL
                     LRNLRFGGKASFNVVETIVYVLIGLALLIAVMWTIRRLRRPDEELPEREIIPFAPSAR
                     NWRAWLSDARAFAARNDWRNAIHMAYWAGISFLEAGGAWKPNRARTPREYLRLINPRD
                     PQLPALSTLTGKFEVVWYGQRPAEQADYEETLGHLEKLGCR"
     gene            complement(5792..6814)
                     /locus_tag="VE783_04550"
     CDS             complement(5792..6814)
                     /locus_tag="VE783_04550"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52697.1"
                     /translation="MLDQTLRPMSTSQVLDRTFYLYRRNFVLFAGIALVTPALNIVVS
                     LLQIWWFGLPFVPDPKKMDPTAMQHVFQAYLARAAVGGLLGITVYVIGYAVSSGATAF
                     AVSMLHLGKATTIRESYSRVKASFGRVLGLVISVFFIAVGPLILFYIAMMLVVVGIAG
                     AAAAAGGGAGSGTTAAIIGIAVGFLIISVGVFGGIFWSFYAYCKYGLAVPACTIETLP
                     VRYSLVRSKFLTQGSKGRLFLIYLLAGLITLGLKSVLEMPAIMSSGIFLKPGMHQSPL
                     AFMWLLIADFFGTLLASPIAAIAMSLVYYDERVRKEAFDLQVMMENVGQAPPAESVAS
                     AAPSMG"
BASE COUNT         1492 a         1946 c         2019 g         1427 t
ORIGIN      
        1 cgcctcaaac ggagtaatcg gccggccgga atctttgata acgcgaatgc ccgcccatcg
       61 tttgcccagc gtctgccctt tccacacagc ttcctggatg gcgaaataac cggtgtacaa
      121 gacgaagccg atcaggaagc cgatcgcgat cacccagatg cggccgccgg aggtgaaggg
      181 attcgccgcg acggtaatta caaaaatgaa gagtatgagg aacagaacag attgaacgag
      241 cgtatcgagc agaagcgcca tgaagcggct gccgatgccg gccagaacga attccagctg
      301 cacctgctcg ggagtctcaa tggtaagctt gtccacgtat gatctcggcc cactggctgg
      361 aaaagcggca aaaccactgg aagcgactgg aatcccttct cgaccaggct cgcaataatg
      421 gcttagcttc cctcacccgg cttgaactcc aggagctcgg gttgttgtat cgccaggctg
      481 ccgctgatct ttccgcactg cgcgaggacc ctagcggcag gacctattcc cgcaccctga
      541 acctgctgct ttcccgcgca cacaatacca tctattcggc gcaaaaatcg agcaccaaag
      601 gcattgtcca cttctacgga tcgatctatc cgcaaatctt tcggcgtaac cttaatctga
      661 tcggaatcgc ctttgcgctg ttcgtgattg gtggtcttgc cggaacgctg ctttccgcca
      721 tccatccgga gttcatgcat cttttccttg gtcccggaat gatggagacg attgagcacc
      781 acaagatgtg gacagattca gtcgtcagca tcaagcctgc agcctcaagc atgatcatga
      841 ccaacaatct gatggtctct tttgcagcct tcgcttatgg gatcacgttt gggttaggca
      901 ccttctacat gatggtcttc aatggcgtgc tgattggagt ggtgggagtg gcgtgctgga
      961 tgggaggcat gagcctgccg ctctggagtt tcgtggcgcc tcatggagtc atcgaactcc
     1021 ccgctatatt cgtcgccggg ggcgcaggat ttcgcattgc ccagggaatg ctctttcctg
     1081 gaatgctttc ccgccgtgac tcacttgcca aggcgggagg cgaagccgtg cggctgctgc
     1141 tggggacaat tcccatgctg atagtggccg gactgatcga aggattcatc tcgccatcgc
     1201 cgaacattcc tccgagatgg aaattcacgc tggccgcggc ggttgccacc gtgttttcca
     1261 gctatttgtt tttctgcgca cgcggtggag tccgggaaga gtacgtgaaa aattaaagtc
     1321 gccggttatt ctgcgatctc acgggttacc taaataagat ttctctcttt aacttccagg
     1381 tactgattca ccagggtagt tgtcaaccgg ctgggagcaa tctccaaagc caacgctccg
     1441 cgatttctga tcttggcgat cagctgctcg cgacgctgta ccagctcctg tgctgccgcc
     1501 actgcgaaca tatcttcttc atccttgggg ctgcgggcgg ccatctgctg caaatcagtt
     1561 tgtgcgatca cggcaaacag cagcaggtgt ttggagagga tctgcgaggc gctctcgatg
     1621 acttccggcg tcatcgaggt atcagccaga tccgtgaccc agatgatgag cgagcgctgt
     1681 ctctggagtt gcatgagggc ggctgcggcg cggagatggt cggcttccgc cacttcttcc
     1741 ttcgccgaag cgagagcttc caggagcgcg cgcatgtgcc taagaccgcg cccaagtcca
     1801 acccgctgct ggatgtcgcg gccatagacg agcaggccgg tgcgatcacc ggaataaagc
     1861 gcgatttgcg ctaacgagag tgctgcgttg actgagagat cgagcttggt taactcccca
     1921 acgcgggcac gcagcaagcg tccggcgtcc atcacaatcc acacagcctg gcttcgctcc
     1981 acctggaaca gcttggttac gtgcttgcca cgtcgcgcgg tggcggtcca gcagatgttg
     2041 cggaattcgt cgccgggttg gtattcgcgc aggctttcaa attcgcgccc caccccccgc
     2101 tggcggatca gccttttctc cagctcaatc tgccgcgcgc gagagagata gatgttgtgg
     2161 cggcgggctt cttccaggtc ggggaacacg cggatggtct gggcgatatc ggcacgcgcc
     2221 cagcgctcgg caaagtgagc gccgctctgg tagcgcagcc atgtcgattt cagctctaca
     2281 tcgccgcgtt gtagaggccg cgcaagatac tgggcgacgg cgctatcgcg tttggcggtc
     2341 cggatctgga gttgcggcgg tgtggaacgg agagccgccg gaatgtcatc catgactctg
     2401 cattccacgt aggcggagct gcggttttgc acttccaggg tgacttccac gttattgctg
     2461 agtgagggcg ctccacccca gcttctctga atgatcaact gatgcgggcg cggcagcgat
     2521 agaagatcaa ccagccacgc cacaacggcg cacgcgtccc aggcaagcat tacaagaagg
     2581 aagcggcggt cccagaacgc gggcactgcc catagcaggc cgacgctgat tagcagaaag
     2641 aagcgcgagc cgaagccaaa tccaagcgtg cgcgtctgct ttgcgggcgc gctgacggtt
     2701 gcggggatga gcgctggagt agccatttct tacttgggca cttccactgt tcccacgatc
     2761 tctttcagcg cctgatcgct gtcctgcccc tcgagttccg cctcgggttt gagcattacg
     2821 cggtgacgga gaacggggag cacggacgct ttcacgtcat caggaatcag gtagtcacgc
     2881 tgctccagag cggcagcggc tttggccacc tgcatcaggc tgatggcggc gcgtgggctt
     2941 gctcccattc ctaacgatgg ccagtcacgg gtgcgccgaa tgatgctcac gatgtactgg
     3001 aaaagtgcag gctctacttt ggtgtttcga acttctgccc gggcctgcgc aagcaggtca
     3061 gtgggtaagg cctgaatctg cgcggcgtcg agattgtgcg tgtcgaaacc ccggtggtgt
     3121 tgttccagga tggcaatttc ctgatcggct tgcggatagt cgactcggat tttcatcagg
     3181 aagcgatcaa gctgcgcctc cggcagcgga taggtacctt cgaattcaat gggattctgg
     3241 gtggcgaata cggtaaagaa ctctgagagg cggtgaggaa caccgtcaat ggtgatctgc
     3301 cgttcttcca tggcttcgag cagtgccgcc tgcgtgcgag gaggcatgcg gttcacctcg
     3361 tcagccagaa gcatgtcagt gaacagaggt ccgcggtgca gagagaaggt gctgcttgca
     3421 agattgagca cgttgctgcc gatgatatcg gcgggcatca ggtcagaggt gcattgaacg
     3481 cggcggaatt ccaggtcaaa cagccgggaa aaacacttga tcaccagagt cttggcgatt
     3541 ccgggcacac cctccagaag ggcgtgaccg ccgcatagaa ttgtcagcag gcactgattg
     3601 ataagctccg actggccgac aatgacttta cccagctcag ttcgtccgtg gttcagtacc
     3661 cgggacacgg tttccatgaa taatggtctc ctctggcaga agtttcaggt tgcgcatgtg
     3721 ccggttcaac tcctgcacca gctccaaaac agttttttct gaaggttgag cgtaaagctc
     3781 ggtttcaatt ctaccgagca ggccttcgag cgagggatcc ttatagccgg tgcgctcgcg
     3841 caacgccctc acgagatcac tatttgaggt ctccggacgc aaacccagac ggcgggtagc
     3901 cgcgaagcga aaacgctggt acgggacctc cagagccgcg tgcgtggctt tcgctttgcg
     3961 gtacagattg ccaaccgtct ccacgaattc aagaggcgag agccgcgtgc cctccggcgc
     4021 aggatgaatc ggcaggttgc gccgggaata ggtaaacacc accgctgcga aaagaaaaac
     4081 acattgcaat aaaccgaaca ggatcggcgg atcagccatg tagctgcgca gcgatgcgcg
     4141 ctcgccgtgg taatactcgt cccaaagtat ctgtgtgttg tcgcggtctc ccaaggagcc
     4201 gaggaacaag cccatattac ccgcttcacg aattcctgcg ttgctcagcg gtatggacga
     4261 agcccaccag atcacctgtc ccttgcccac cggataggaa acaacgatgg gtctgccttt
     4321 gtcagcgtag tgcgccagat agggtgggac gctatgctgc caatagcagt tcggcgacag
     4381 ccgaatgtcg ccctcatgcg aaaggccggt caaaagctca ggcttgtagg atttccataa
     4441 cggcgatggt gcgctctcca tttccaccga cgcctgctgg agtaacagct cgggcatgca
     4501 tccggtgaat agaatcctgc caccgcgagc aagaaaagtc tcaagcgcaa gccgctggtt
     4561 tctgtcgctg ggatttgcca gaccaggatt cgctaatacc agtatcgttc cggacgggtt
     4621 gattggcagt tcagccggag gcagctccca gcgctgcact ttatatccaa gctcctgcaa
     4681 caagagatac gccgctttgg cgccctgcga ctgggaagaa tatgtgctgg gcactccgga
     4741 gtcttcctgg tcggcgctgg aaagaattgc cagcgcgatc accagcggaa caagaatggc
     4801 cccggtccac agcaacagtt tgcgatcacc cggagcaatg ttcagcggca tcccagcttc
     4861 tccaggtgac caagggtctc ttcatagtct gcctgctctg ccgggcgctg tccgtaccag
     4921 acaacctcaa acttgccagt cagggtggag agtgcgggta gctggggatc gcgcgggttg
     4981 atgagccgga gatactcgcg cggagtgcga gcccggttcg gcttccaggc gccacccgct
     5041 tcaagaaacg aaattcccgc ccaatacgcc atgtggatgg catttctcca atcgtttcta
     5101 gcggcaaagg cccgggcgtc gctgagccat gcgcgccagt tccgtgccga gggcgcgaag
     5161 ggtatgatct cgcgttcggg tagctcctca tccggacggc ggagccggcg aatggtccac
     5221 attactgcga tgagcaaggc gaggccaatc agcacgtaaa cgatcgtctc taccacgtta
     5281 aagcttgcct tgccgccaaa ccttagattt cgaagcaaac gccatatcca gcgataaatc
     5341 ctgtccagca atgcttcacg aatgccgggc ggacgaacgt tgttgaattc gcgacgctga
     5401 agaatggcat tcagcttctg cctgccgtca gtgaaatcgg cgggacgatc gtaagactct
     5461 gcctcacgac tgagggcggc catgtacttt ttgatttgct ccagcttggc cggcttttca
     5521 gcgtcgcttg aggctgaaaa cgtggctacc gcgtccttga gcggtttcag ggaaacggcg
     5581 gatggcccgc gtggcgtgtt tacggtgagc gattcgggaa tgtcctttgc caaaccgccc
     5641 gcatgttcag gatgttcgga gagagcctct atcctggaac tgtaataccg tacctgctgc
     5701 cggtactcgc tgacggagat gtcagcggca atagcaggca cggctgtggc cagcagaaca
     5761 acagcgagaa ttgctgtttt cgaactcagg ttcatcccat gctgggcgcg gcgctcgcga
     5821 cagattcggc tggcggagcc tggcccacgt tctccatcat gacctggaga tcgaacgcct
     5881 ctttgcgcac tcgctcgtca taatacacaa gtgacatggc aatggccgca atggggctgg
     5941 ccagcagcgt tccgaaaaaa tccgcaatca agagccacat gaatgcaagc gggctctggt
     6001 gcatgccagg tttcagaaaa atgccggaac tcataatggc cggcatctct agaacgctct
     6061 taaggccgag cgtgatcagt cctgccagca ggtagatcag gaacagccgg cccttgcttc
     6121 cctgggtcag aaacttgctg cgcacaagcg agtacctgac gggcaaagtt tcaatggtgc
     6181 aggcgggaac tgccaatcca tacttgcaat aggcatagaa agaccaaaag atgccgccga
     6241 aaacgcctac agagatgatg aggaagccga cggctattcc tatgatcgcc gcggttgtac
     6301 cggagcctgc tccgccgcca gcggccgccg ctgctcccgc aatcccgacc accacgagca
     6361 tcatggcgat gtagaacaag atcaacgggc cgacggcgat gaaaaatacg ctgatcacga
     6421 gccccagtac gcgtccaaaa gacgccttca cgcgcgagta ggattcgcga atggttgtgg
     6481 ccttgcccag gtgcaacatg gaaacggcga aggccgtggc tcccgaggaa actgcatatc
     6541 cgatgacgta aacggtgatt ccaagcaacc ctccgacggc cgcacgggca agatacgcct
     6601 gaaaaacgtg ctgcatcgcc gttggatcca tcttcttggg atcaggaaca aagggcagac
     6661 cgaaccacca tatctggagc agagaaacaa cgatgtttaa tgccggtgtg accagggcaa
     6721 tgcctgcgaa cagaacaaaa ttcctgcggt aaagatagaa cgtgcggtcc agcacctgtg
     6781 aggtgctcat gggacgcaag gtttggtcga gcataggttc tccgcgttca ggtgggggta
     6841 ggcaaatggt agcacgatta ccggcgtatc aatgcattcc cagc
//
LOCUS       DASQYP010000143         2962 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_111103, whole genome shotgun sequence.
ACCESSION   DASQYP010000143 DASQYP010000000
VERSION     DASQYP010000143.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 2962)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2962)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2962
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_111103"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..310
                     /locus_tag="VE783_04555"
     CDS             <1..310
                     /locus_tag="VE783_04555"
                     /EC_number="2.1.2.1"
                     /inference="COORDINATES: protein motif:HMM:NF012677.4"
                     /note="catalyzes the reaction of glycine with
                     5,10-methylenetetrahydrofolate to form L-serine and
                     tetrahydrofolate; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="serine hydroxymethyltransferase"
                     /protein_id="HYX52698.1"
                     /translation="AKGMLGNEAEQALGQAAITVNKNAIPFDTNPPLKPSGIRIGTPA
                     LTTRGMKEKEMQQVGAFIAEALRNHKDAQALARVRRQVLELAEAFPLYPELREPVGAA
                     "
     gene            complement(318..1373)
                     /locus_tag="VE783_04560"
     CDS             complement(318..1373)
                     /locus_tag="VE783_04560"
                     /inference="COORDINATES: protein motif:HMM:NF019607.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-dependent sugar dehydrogenase"
                     /protein_id="HYX52699.1"
                     /translation="MQPIATGLTAPLDLETPPDNSGRLFVVEQGGTIHIIQNGMILAS
                     PYLDISSKVLNTNESGLLGLTFHPSFAQNGKLYIYYVRSNAGQVQSVFSELTAAPAAN
                     QVDPATERILLVVNQVGNFTNHKAGQLAFGPDGFLYFGLGDSGSEGDPFNNGQNTQTL
                     LGKIMRIDVNSTSPGRQYGIPGDNPFVAGGGLPEIYAVGFRNPFHFSFDKTTGRLFAG
                     DVGQDKFEEVDIVTKGVNYGWSTMEATHCFKPASGCNAAGLTPPIVEIPHPEAEAVMG
                     GFVYHGTALKNFQGLYVFGDLNGKIWALTENPANTFTRSTLMNAGFSISSFGQDSAGE
                     LYVVDISGGRVLKIVPM"
     gene            1717..2415
                     /locus_tag="VE783_04565"
     CDS             1717..2415
                     /locus_tag="VE783_04565"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52700.1"
                     /translation="MAISALAEAGSQKPDLPTILQRMQNAQLEDRANARAYTVRRDYQ
                     ILDKSQEPKAQVIASISFFPPNRREAQIESSHGGMGEKVLRDVIAHETEPAKEAAKKE
                     ISPANYSFELLGTAALDGRSCYLLGMKPLREDKELIKGQLWVDAETYHILRVEGSPAK
                     SPSWWIRDLYVFMSFGEIDGNWMPTFTRAIANVRFKGRYEMVARDLEYRAGTVHTAHR
                     RRNAGILAGAAIQP"
     gene            2624..>2962
                     /locus_tag="VE783_04570"
     CDS             2624..>2962
                     /locus_tag="VE783_04570"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52701.1"
                     /translation="MIRRFIAISSIVVLACTLPAFAGTVSGKIKLGNTTNASAGAATG
                     EKETAVVWLEGQQDPKPPETAVKISQKNLQFSPDFLVAVKGQKVDMPNDDDVAHNVFS
                     FTGQNQFNLGV"
BASE COUNT          657 a          806 c          871 g          628 t
ORIGIN      
        1 tgccaaaggc atgctgggca atgaagcgga gcaggcgctc ggacaggcag cgattaccgt
       61 caataagaac gcaattccgt tcgacacgaa tccgccgctg aagccgagcg gcatccgcat
      121 tggcactccg gcgctcacca cccgcggcat gaaggaaaaa gagatgcagc aggtgggcgc
      181 gttcatcgca gaagcgctgc gtaatcacaa agacgcgcag gcgctggcca gggtccgtcg
      241 gcaggtgctg gaacttgcgg aggcattccc gctctatccg gagctgcgcg aacccgtggg
      301 cgccgcgtga tcacgattta catcggtacg atcttcaata cgcgacctcc ggagatgtcg
      361 accacataaa gctctccggc cgagtcctgt ccgaatgagc tgatgctgaa accggcgttc
      421 atgagcgtgc tgcgggtgaa tgtgttggct ggattttccg tgagcgccca gatttttcca
      481 ttcaggtcgc cgaaaacgta gagtccctgg aaattcttca acgccgtgcc gtgataaacg
      541 aagcctccca ttacggcttc ggcctccgga tgcgggattt cgacaattgg tggcgtgagg
      601 ccagcggcat tgcagccgct cgccggcttg aagcaatgcg tggcttccat tgtgctccag
      661 ccgtagttga cgccttttgt cacgatgtcc acttcttcga atttgtcctg gccaacatcg
      721 ccagcgaaaa ggcgtccagt cgttttgtcg aaggagaagt ggaaaggatt gcggaatcct
      781 actgcgtaga tctccggcag gccgcctccg gccacaaaag gattatcgcc ggggatgccg
      841 tactgccgac cggggctggt ggaattcacg tcaatgcgca tgatcttgcc cagcagcgtc
      901 tgcgtgttct ggccgttgtt gaaagggtcg ccttcgctgc cgctgtcgcc cagcccgaag
      961 tagaggaagc cgtccggacc aaaggcgagc tggccggcct tgtgattggt gaagttgcca
     1021 acctggttta ccaccagcag tattcgctcc gtcgctggat caacctgatt ggcagcggga
     1081 gctgctgtga gttctgagaa aacggactga acctggcccg cgttggagcg cacgtaatag
     1141 atatatagct tgccattctg ggcaaagctg ggatgaaaag tgaggccgag cagccccgat
     1201 tcatttgtgt tcagcacttt cgaactgata tcgaggtagg gggaagccag gatcatgccg
     1261 ttctgaatga tgtggatggt gccgccctgc tccaccacga agagccggcc ggaattgtcg
     1321 ggcggcgtct ccagatccag gggagcagta agccctgtgg cgattggttg caaggtaatt
     1381 gctcccgggg ggccttgagg tgagttgttg ttatttgaga gacttccgga cccacaacct
     1441 tgaacaccgg ccagcccaaa ggcgagcagc agaacagcag ctagattcct gagaaacatc
     1501 tttactccgt gctcgttcag atgactcccg gaagcaggct gctggctagg ctgtcaagcg
     1561 gtgcggcaac tcacaagacc atggctgcag gaacaacgac cttagtcccc ggttcttagc
     1621 cctccttttc gcagtaaatt gcttccaata gagcaggaac aggagtagtg ggtggtgcgg
     1681 gttcgtatgg caaatctcgg ctgggcagta tgcttgttgg ccatatccgc attggccgag
     1741 gcaggcagcc agaaaccgga cctgcccaca attctccagc gcatgcagaa cgcgcagttg
     1801 gaagaccggg ccaacgcgcg cgcatacacg gtccgtcgcg attatcagat tctggataaa
     1861 tcacaggagc ccaaggcgca ggtcattgca agcatcagtt tctttcctcc taatcggagg
     1921 gaagcccaga ttgagagcag ccacggcggc atgggtgaaa aggtactgcg ggatgtgatt
     1981 gcccacgaga ctgagccggc caaagaagcg gcgaagaaag aaatctcacc tgcgaactac
     2041 tcgtttgaac tgctcgggac cgcagctctc gacggccgct cctgctatct gctgggcatg
     2101 aaaccgttgc gcgaggataa agagctgatc aaagggcagc tctgggtgga tgccgagacc
     2161 taccacattt tgcgtgtgga aggctcgccg gccaagagcc cctcatggtg gatccgcgat
     2221 ctttatgttt tcatgagctt tggcgagatt gacggcaact ggatgcccac tttcaccagg
     2281 gctatcgcaa acgtgaggtt taaaggccgt tatgaaatgg tggctcgcga tcttgaatat
     2341 cgcgcaggta ccgtgcatac ggcccaccgg cggcgcaatg ccggaattct agccggtgca
     2401 gctatccagc cctgaattag cagcttaatt ttctacaaat tacctcccgc attaccttcg
     2461 taagttgctg ccgtttaagt cagctcttat cttctattcc acacttccgg attatcggct
     2521 ggtttagcgc tctcgcaaga ctgaggtgcg gctccgaaag tccacccctt ctttgtccgg
     2581 ccgagcagtg cgttccgaaa agcaattttg ggagataaat ttcgtgatca ggcgcttcat
     2641 tgcaatcagc tcaatcgttg tcctcgcgtg cacactgcct gctttcgccg ggacggtttc
     2701 aggaaagatc aaacttggaa ataccactaa cgcatccgct ggcgcagcaa ccggcgaaaa
     2761 agagacagcg gtggtgtggc tggaagggca gcaggatcct aagccaccgg agacggccgt
     2821 gaagatctca cagaagaatc ttcaattctc gccggacttc ctggtggccg tgaagggcca
     2881 gaaggtggac atgccgaacg atgatgacgt tgcgcacaac gtattctcgt tcaccggcca
     2941 gaaccagttc aacctgggcg tg
//
LOCUS       DASQYP010000144         9661 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_111104, whole genome shotgun sequence.
ACCESSION   DASQYP010000144 DASQYP010000000
VERSION     DASQYP010000144.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 9661)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9661)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9661
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_111104"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1934)
                     /locus_tag="VE783_04575"
     CDS             complement(<1..1934)
                     /locus_tag="VE783_04575"
                     /inference="COORDINATES: protein motif:HMM:NF013123.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DPP IV N-terminal domain-containing protein"
                     /protein_id="HYX52702.1"
                     /translation="MKNHFLFSSIFILFSLPAFPQASAAGLGRQFTKEDYDRANNMRP
                     GILLPRLKNGFVVPHWIGEGDEFWYKRDTQEGFEFVLVDAATGRRQPAFNHEKMAQAL
                     AQTTGNKVRADQLPFESFTFNPDRSAIHIVVNGKNGPTDYDCKLNIATCSAAPPSLPP
                     PLEITIFDRVPPSSPSPNEGVLISPDQHWGIFTRDNNLWLRDLTKNHDRQLTRDGGPH
                     FGFGIYMHEWQSAEIPRQKAIAAGHHLPPMASYWSPDSRTVIVPRVDERHVADYPYID
                     ATPEDGSFRPKLYMVRLPLVGEKPSIVEWYAFDVPTGASRRINFPYEKLLFPEADLFA
                     VCKKWWSSNGHHLYAVAYGENLEAAYLFDADITTGSVRTMIDEHMKPRMQLSSAIYDS
                     PNVWASSSGNDVIWFSQRDGWGHLYLYDGHTGKLRNQVTKGAWLVRDIIKVDENRRRI
                     YFTGLGRETGNPYYRYLYRVNFDGTDLRLLSPEPADHMLLNPDSIYTFDISTPYDAIS
                     PSGKYVVYNFSTPDQPTQTAIHSTDDGRLVSIVEKADASEVLAAGYHPPEEFVAKAAD
                     GKTDLWCLLYKPENFDPSKRYPLMDVNYGSPSVAAVPRNFPTAIRGPNVPQVAVLNSL
                     GFAVVAIDARGTAYREREFS"
     gene            2416..3099
                     /locus_tag="VE783_04580"
     CDS             2416..3099
                     /locus_tag="VE783_04580"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52703.1"
                     /translation="MFRDPQELCPHPSYARHGLAVSADTLSAIRARGELAFLEPMITT
                     RDRLIIDGYARWELAKELQFPRLQCIEYDLSETESLSLPLQRHRRANVLNNYSRIMLA
                     FDLEPELSEKARTNRQIGGQQKGWSNLTKAEILHVRSEIAKAAAVSVGNVTKVKQLNA
                     RCVPEINTALFNAEVSIHWAWKLRDAPAEDQLDALGRSRFEKGLLKDVRKLVAGRQRT
                     CSSSTAVRE"
     gene            3520..4338
                     /locus_tag="VE783_04585"
     CDS             3520..4338
                     /locus_tag="VE783_04585"
                     /inference="COORDINATES: protein motif:HMM:NF016847.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HYX52704.1"
                     /translation="MPKQFWTYFHQDRRLLSDIAFLGASVIKRWIQAEYGVVPIVLVI
                     PHTFGRRLNFHPHLHILVSAGALNKRKNCWIHFRHIDQYALMYWWRFAVVHYLAEALG
                     PQVGDEGSFREVLARQCKRPWNIHVKRFSSKWHFLRYAARYLRRPPIAQYRIVDITDE
                     HVEYWANDLKLKAWVKIKVSVKEFLELLIQHVPDRYAHGIRYFGLTSPAGKFLFSSAM
                     FAVLGEEQKLRPKRLSFEAMSLKCFGVNPILDSHGQRMRRVGRHAPASAPAKEA"
     gene            4927..5244
                     /locus_tag="VE783_04590"
     CDS             4927..5244
                     /locus_tag="VE783_04590"
                     /inference="COORDINATES: protein motif:HMM:NF016836.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BON domain-containing protein"
                     /protein_id="HYX52705.1"
                     /translation="MLISSSSTRTIPVNHTAPSDTRAEAVQPRPRPHNHSDLNEQIRS
                     NLQSVFRGDLILRGADLEASVDDQTITLTGTVQNYRQHQRALELLSPYINERSVEDKV
                     LLE"
     gene            complement(5321..6322)
                     /locus_tag="VE783_04595"
     CDS             complement(5321..6322)
                     /locus_tag="VE783_04595"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52706.1"
                     /translation="MALLATAVCLIVANAQGQPATKTPAGSKPIQARHVLGFEGEKRD
                     AKGELSIKDGALEFQSNGGSAGQLNLSSIQNVSVGEESRQVGGVPMMMGKAALPYGGG
                     RIVSLFSHKKYDSVTFEYVDTNGGFHGAIFRLNKGQAEVLKEALQARRGEAAPQEHPV
                     LAQKTTEATGDTAQQWSVQVGRIDPGETAVDACFSDAIYENVLEELAKSKQFKNVFRS
                     GDRQASQTTGVLVLTTLVEKYSPGSETKRAVTTLGGATKLKVHIQLEKPDGSVLLERD
                     LEGNVRFFGDNMRATSTLARKVAKAMNASALSGPVAPAGQQANESAAAQGRLSKSAL"
     gene            complement(6449..8974)
                     /locus_tag="VE783_04600"
     CDS             complement(6449..8974)
                     /locus_tag="VE783_04600"
                     /EC_number="2.4.1.1"
                     /inference="COORDINATES: protein motif:HMM:TIGR02093.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycogen/starch/alpha-glucan phosphorylase"
                     /protein_id="HYX52707.1"
                     /translation="MSAKPTAVAEVPAVPKTPEEWRVSELLHQYGCGPIPFAGSENAF
                     FERHLVFDRVIDPAVSSARERFEALSRSIRDVLAQRWVLTRNTYNKLNPKRVYYLSME
                     FLVGRSLRNNISNLLLSPLVEYAAKENGFDWLEVIEEEPDAGLGNGGLGRLAACFLDS
                     LASMQLPAVGCGLRYEYGMFKQQIVDGWQKGNPDNWIRSGDPWEVARPTEAVEVKLGC
                     SFKLVGGTFEPLRGKPSSLIGIPYDRPVVGYGGKTINTLRLWAAAAPDYFDFHEFGTG
                     DFVGALGERLEAESLTRVLYPDDSTMAGRGLRFIQEYFLVACSLADIVRRFRRLDDDW
                     DKLPERAAVQLNDTHPTLAVPELMRILLDEAHLEWEQAWDITKKTLAYTNHTLLPEAL
                     EKWPVDLFETVIPRHLEIIYEINRRLVDEARLIFPGDDGRLARVSVVEEGKERKIRMA
                     NLAIAGSHSTNGVAAVHSNLLRSTTVRDLAEMYPERFNNKTNGITHRRWLLQANPELA
                     DVISEAIGESWITDSSELGRLKPFAEDPDLQYKFLVAKRAAKVRFSQWLKATAGQQVD
                     PNTIFDCQIKRIHEYKRQLLNALRVVVMYNRLRANPEMEMVPRTFFFAGKAAPAYWFA
                     KLIIKFINNLAGTIAGDPAVRDKMKVVFVPDYNVTLAERLIPAADVSNQISTAGYEAS
                     GTSNMKFMMNGALTVGTRDGATIEMAEEAGEENLFLFGLSVEEVANTRGWYSPLWHYE
                     NDREARAALDLISANYFSRHEPGIFTPLLDALLTHGDQYMHLADLQSYCEAQDRVDRL
                     YSHPREWARKALLNIASSGKFSSDRTIAEYARDTWGIEPCPIP"
     gene            complement(9125..>9661)
                     /locus_tag="VE783_04605"
     CDS             complement(9125..>9661)
                     /locus_tag="VE783_04605"
                     /inference="COORDINATES: protein motif:HMM:NF013069.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HYX52708.1"
                     /translation="VLLIYLALVMQFKNAVKPLLVFAAIPYGMTGALAGLVIMGQPFG
                     FMAFLGVASLVGVIVSHVIVLFDFIEEAHERGEPLREALLDAGIVRLRPVMITVGATV
                     LGLVPLAMHGGPLWEPLCYAQIGGLTIATFVTLILVPVLYSIFVLDLKLIRWEETKLS
                     ESPEGEPAAHPELVASSH"
BASE COUNT         2136 a         2716 c         2608 g         2201 t
ORIGIN      
        1 taagagaatt cgcgttcgcg ataggcggtg ccacgggcat cgatcgcaac cacggcaaat
       61 cccagcgaat tcaagactgc aacctggggc acgttgggcc cgcggatggc ggtgggaaag
      121 ttgcgcggca ctgcggccac cgatgggctc ccgtagttca cgtccatcag cgggtaacgc
      181 ttggagggat caaaattttc gggcttgtaa agcaagcacc agagatcggt cttgccatcg
      241 gcagccttgg ccacaaattc ttcgggagga tgataaccgg cggccaacac ttcagatgca
      301 tcggcctttt caacaatcga gaccagccgc ccgtcatcgg tggagtgaat ggccgtctgc
      361 gtaggctgat caggggtgga gaagttatac actacatatt ttccgctggg agagatggcg
      421 tcatatgggg tactgatatc gaaggtgtaa atgctgtcag gattgagcag catgtgatca
      481 gcaggctcag gcgatagcag ccgcaaatcg gtcccatcaa agttcacgcg gtagagatag
      541 cgatagtaag gattgccggt ttctcgtccc aggccggtga agtaaatgcg gcggcggttt
      601 tcatctactt tgattatgtc gcgcaccagc cacgcgcctt tggtcacctg gttcctgagc
      661 tttcccgtgt gaccgtcata gagatagaga tgtccccagc cgtcgcgctg ggagaaccag
      721 atcacatcat tgccgctact gctggcccac acgttgggcg aatcgtatat ggcggagcta
      781 agctgcatgc gcggcttcat gtgctcgtca atcatggtgc gtaccgagcc ggtagtgatg
      841 tcagcatcaa acagataagc cgcttccagg ttttcaccat aggcaacagc gtaaagatga
      901 tggccatttg agctccacca tttcttgcag acggcaaaca ggtcggcctc agggaaaagc
      961 aatttctcat aagggaagtt aatccgccgg gaggcgccgg tggggacatc aaaggcgtac
     1021 cattcgacga tggacggctt ttcgcccacc agaggaagcc gaaccatata caactttggc
     1081 cggaagcttc cgtcttcggg tgtagcgtct atgtagggat aatcggcaac atggcgctca
     1141 tctacgcgcg gcacaatcac ggtgcgtgaa tcgggcgacc agtatgaggc catgggaggt
     1201 agatgatggc cggccgcaat ggctttctgg cgcggaattt ccgccgattg ccattcatgc
     1261 atgtagattc caaatccgaa atgcggtcca ccatcgcggg tgagttggcg atcgtgattc
     1321 ttcgtcaggt cgcgcagcca gaggttgttg tcccgcgtaa agatgcccca atgctgatca
     1381 ggtgatatca gcacgccttc attgggactg ggcgaagaag gtggaacgcg gtcgaaaatc
     1441 gtaatttcaa ggggaggtgg caaggaaggc ggcgcggcac tgcaagtcgc aatattcaac
     1501 ttacagtcat agtccgtagg gccatttttc ccattgacga cgatgtggat tgcactgcga
     1561 tcaggattga aggtgaaaga ctcgaatggc agttgatcag cgcgcacctt gttgccagta
     1621 gtttgcgcga gcgcctgggc catcttttcg tgattgaaag cgggctgcct gcggccagta
     1681 gccgcatcca ccagcacgaa ctcgaatccc tcttgagtgt cgcgcttgta ccagaattca
     1741 tcgccctctc ctatccagtg cgggactaca aaaccgtttt tcagcctggg aagaagaatg
     1801 cccggacgca tgttgttggc gcggtcgtaa tcctctttgg tgaactggcg gccgaggcca
     1861 gcggcactgg cctgcgggaa cgcgggaagg gaaaataaaa tgaaaatgct cgaaaaaagg
     1921 aaatgatttt tcatggctgt agatttgcgg acggattata cgcgcattgc ccgtccagca
     1981 accctgcccc tgcggctact ggggcgaccc ccacggaggc agatagacta cacggtccga
     2041 tgatgatcgg gtgaaattgt gcccgcgtgg gccgcaacgc cgaggcccct tgcgggattt
     2101 gaacccgtgt taccgccgtg aaagttgagc cgttctgcgg gcgtttgagc ccgcaggcga
     2161 aatcctgagc gtagccgaag gagctctgaa gaaaagcttt ggatgcatct ttggcgtccc
     2221 cttgcgggat ttgaacccgt gttaccgccg tgaaagggcg taatttacac agcaatccaa
     2281 gaacttggca gcatagcagg cgcacggcgg gtaccgtaaa gactgctaaa gacaagctgc
     2341 tgttgtggga ttgttgtgga atcagatagc tcgcaagtcc tcacaaagtc acagagcaag
     2401 ttctctgggc agctcgtgtt tcgcgatccg caggaactgt gtccccaccc gagttatgcc
     2461 cggcacggtt tggccgtatc cgcggacact ctgtccgcga tccgggcaag aggagaactt
     2521 gcgttccttg agccgatgat cacgacgcgt gaccggctca tcattgacgg atatgctcgc
     2581 tgggaacttg caaaagaact ccagttcccc aggcttcagt gtatcgaata tgacctatcc
     2641 gaaacggaga gtctttcact gcccctgcaa cggcaccgtc gcgccaacgt cctcaataat
     2701 tattcacgca taatgctcgc gttcgacctt gagccggagc tgtctgaaaa agctcgaaca
     2761 aataggcaga ttggtggtca gcaaaagggt tggtcaaatt tgaccaaagc tgagatcttg
     2821 catgtccgat cggaaatcgc caaagcagca gcagtttcgg tgggaaatgt caccaaagtt
     2881 aagcaactga acgccaggtg tgtgcctgaa atcaatactg cgctctttaa cgccgaagta
     2941 agcattcatt gggcgtggaa actccgagat gctcccgctg aggaccaact cgatgccctc
     3001 ggccgatccc ggttcgaaaa agggctcctg aaggacgtcc gcaagctcgt cgctggtcgt
     3061 cagagaacct gttccagtag caccgcggta cgtgaatgac ttagtggacc ggttgacccg
     3121 gcttgccgcc gagcaatcac atgttctccg cattgaggtg atcgaaggga gccgtgccgg
     3181 aatcttcatc acgaaggaat tggctcggat gatcggaatg gaacaactaa agttatgcaa
     3241 tcaaagcgat ccttacaaaa gtttgccgaa agcacccgag agttgtggac cagacaggga
     3301 attcgtcagc cggttcgcga caatctagag aaactcacga aatgtcgcac tctggcttta
     3361 ggtgctgaga tatatgcgtc cgattcagag acaaagacga tttgccatac ctgtaaatcg
     3421 cggttctgcc caggctgcgg taaccgcgcg acggtgacct ggctgcgcga gcagtggcgc
     3481 gcgctaccgg actgcaggta ttcagagatc tgcttcacga tgcctaaaca attctggacc
     3541 tactttcatc aggatcgccg gctcttgagc gatatcgcct ttcttggcgc ttccgttata
     3601 aagcgctgga tacaagcaga gtacggcgtc gtaccgattg tcctcgtaat accgcacacc
     3661 ttcggtcggc gcctgaactt tcatccgcac ttgcacattt tggtctcagc aggagcgctc
     3721 aacaagcgga aaaactgctg gatccacttt cggcatattg atcaatacgc tctcatgtat
     3781 tggtggcggt ttgcggtagt ccattatctg gccgaggctt tgggcccaca agttggagat
     3841 gagggatcct ttcgcgaagt gttagctcgc caatgcaagc ggccatggaa catccacgtc
     3901 aagcggttct catctaaatg gcacttcctc cgatatgccg cgcgttatct caggcgccct
     3961 cccattgccc aataccggat tgtcgatata acagatgagc acgtcgaata ttgggccaac
     4021 gatttgaagc tgaaagcctg ggtgaaaatc aaagtttcag ttaaagagtt cttggaactg
     4081 ttgattcagc atgtacctga tcgatacgct cacggcatcc gctattttgg ccttacatcg
     4141 ccggcaggta agttcctctt ttcaagtgcg atgtttgccg tcttgggaga ggaacagaag
     4201 ctaagaccta aacgcctttc gttcgaagcc atgagcctga aatgctttgg tgtcaatcct
     4261 attctcgata gccatggtca gcgcatgcgc agggttggcc ggcacgcgcc ggcatccgct
     4321 ccggcgaaag aggcatagaa gaatcgtgat aattgccaac cttgctcttc gcattacctc
     4381 tgcggctacg agtgacagag ataagtgcgt gtcgcttttg attgacgcgg atgacgtcca
     4441 tttggttcag cattcctccc cttcccaaaa gtaaaccgta tcaagatatc ttgggcagcg
     4501 gcacaggaat caggtatgac tgacagctga aatgaatttt tatttttcct atacatgaac
     4561 atgccagaga tggacggatt gatattgctg ggggcctgag ttccccatat ctcgaaagac
     4621 ggcccactca gtgaccgcat gagggctcgg tttgaaattg ggcagccccc attggcgccg
     4681 cccgcagcta accctcatca tttcttcagt tcagcacaga tgagatttgg agcgctactt
     4741 gcacttgaat ccagtgacgc tggtacgaat agctggaaag cgagcgccaa acgtgaccag
     4801 tgccacagaa ggagcattat gtgcattgca aaggcgttta caaaccgcgg cacgcaaaag
     4861 ttgctcacga tggtgtgcct gcttggctgt gcgtcgcgcg gcttaccgca gaggcaagcg
     4921 gaattgatgt taatttcgag cagctcaacc cgcaccatcc ctgtcaatca cacggctccg
     4981 tcagatactc gtgcggaagc cgttcaaccc cggccacgac cgcacaatca ctcagactta
     5041 aatgagcaga ttcgcagcaa tcttcaatcg gttttccgcg gcgacctcat tctgagaggc
     5101 gccgatctgg aagccagcgt ggacgatcag accatcacgc tcactggaac agtgcagaac
     5161 tatcgtcaac accagagggc cctggaactg ctctcaccat atattaatga gcgcagcgtg
     5221 gaagataagg tcctcttgga gtagcggacg cctacccgcg cctccatgtc tcagcactcc
     5281 ttctgaactc tgtttgcgca agtcacctgc ctttgataac tcacaaggcc gacttggata
     5341 gccggccttg tgctgctgcc gattcatttg cttgttgccc ggctggagct actggaccgg
     5401 acaacgctga cgcgttcatt gcttttgcaa cctttcgggc cagtgtgctg gtcgctcgca
     5461 tgttgtcacc aaagaaccgg acatttcctt ccaggtcgcg ctccaacagg acgctgccgt
     5521 ccggcttttc cagctggatg tgcaccttga gcttcgttgc tccccccaac gtcgtcacgg
     5581 cgcgctttgt ttcacttccc gggctgtact tttcaacaag tgtcgtcagg acgagcacgc
     5641 cggtggtttg actcgcctgc cggtcgccgc tcctgaaaac gttcttgaac tgtttcgatt
     5701 ttgccagctc ttccagaacg ttttcataga ttgcatccga gaaacaggcg tcaactgcgg
     5761 tttcgccagg atcaatcctg ccaacctgca cactccactg ctgtgcggtg tccccagttg
     5821 cttctgtcgt tttctgcgcc aacactggat gctcctgcgg cgccgcttcg cccctgcgcg
     5881 cctgcaatgc ttctttcaga acttcagctt gtcctttgtt caaccggaat attgcgccat
     5941 gaaatccgcc attcgtatcc acatattcaa acgtgacgct gtcatacttt ttgtgcgaga
     6001 acagacttac gatccggcca cccccgtaag gtagtgccgc ctttcccatc atcatgggta
     6061 caccgcccac ctgcctgctc tcttcgccaa ccgatacatt ctggatggaa gacagattca
     6121 gctgtcccgc ggaacctcca tttgactgaa actccagagc gccatccttg attgagagct
     6181 ctcccttggc gtcacgcttt tcaccttcaa agcccagaac atgtctggcc tgtatgggct
     6241 tgctgccagc cggggttttg gtcgcgggtt gaccctgagc gttggcaacg attaggcaca
     6301 ctgccgtggc aagaagagcc atgctcgcct gccgcagtat gaagggacaa tatgattttg
     6361 tttccgggtc catcttgcat ttcatagcac tcactcctta tctaagccaa acggatctac
     6421 cgccaccccg agtatcgtta tccttgtgtc acggtatggg acacggctct atcccccagg
     6481 tgtcgcgagc atattcagca atggttcggt cgctggaaaa ctttccggag ctcgcaatat
     6541 tcaggagtgc tttgcgtgcc cactcccgag gatgggagta gagacggtca actctgtctt
     6601 gcgcctcgca ataggattgc aggtcggcaa ggtgcatgta ctggtctccg tgcgtgagga
     6661 gcgcatccag cagcggcgta aatatgcctg gctcgtgcct gctgaaatag ttggcagaga
     6721 tcaggtccag cgcggcccgt gcctcacgat cattctcata gtgccaaagc gggctgtacc
     6781 agccgcgagt gttggccacc tcttctacac tcaagccaaa aaggaacagg ttctcctcgc
     6841 ctgcttcctc agccatctca atggttgcgc cgtcgcgtgt tcccactgtc aaagcaccat
     6901 tcatcatgaa tttcatgttg ctggttccgc tcgcctcgta acccgcggtg gagatttggt
     6961 ttgacacatc agccgccgga atcaggcgtt ccgcgagcgt cacattgtaa tcaggcacaa
     7021 acacgacttt cattttgtcg cgaacagcag ggtctccggc gatagttccc gcgagattgt
     7081 tgatgaattt gataatcagc ttggcgaacc agtacgccgg cgccgccttc cccgcaaaaa
     7141 agaacgtgcg cggaaccatc tccatctccg ggtttgcgcg caggcggttg tacatcacca
     7201 ccacgcgcaa tgcgttcagc agctggcgct tgtattcatg gattcgtttg atctggcaat
     7261 caaaaatagt gttcgggtcc acctgctggc ctgcggttgc tttcagccat tgcgagaatc
     7321 ggaccttcgc agcacgtttt gcaaccagga acttgtattg caaatcggga tcttccgcga
     7381 atggttttaa ccggcccaat tcgcttgaat cagtaatcca gctttcccca atggcttctg
     7441 aaatcacgtc ggcaagctcc ggattcgcct gcaacagcca tctgcgatga gtaatcccgt
     7501 tcgtcttgtt gttgaatcgc tcggggtaca tctcggccag gtcgcgcacc gtcgtgctcc
     7561 gcaaaaggtt ggaatggacc gccgcgactc cattcgtgct gtgcgaaccg gcaatcgcca
     7621 gattcgccat ccttatcttg cgctctttgc cttcttccac aacgctcact ctcgccagcc
     7681 gtccatcatc gcccggaaaa atcaggcgag cttcatccac aaggcgccgg ttgatctcgt
     7741 agatgatctc caggtggcga ggtatcacgg tttcaaagag gtccaccggc catttttcca
     7801 gcgcttccgg cagcagcgtg tgatttgtgt atgccagcgt tttcttcgta atgtcccatg
     7861 cttgttccca ctccagatgc gcttcgtcca gcaggattcg catcagctcc gggacagcca
     7921 gtgtcgggtg agtatcattg agctggactg ccgctctctc cggcagcttg tcccaatcgt
     7981 catccaggcg gcgaaatctc cgaacaatgt cggcaagcga acacgcgacc aggaaatatt
     8041 cctggataaa gcgcaaccca cgacccgcca tggttgagtc atccgggtag agcacgcggg
     8101 tgagcgactc cgcttccagc ctttcgccca gtgcgcccac aaaatctccc gtgccaaact
     8161 catggaaatc gaagtaatcg ggcgcagccg cggcccatag ccgaagcgta ttgatggtct
     8221 tgcctccgta gcccaccacc ggccggtcat atgggatgcc gatcaggctc gatggctttc
     8281 cgcgaagagg ctcgaaagtg ccgccaacca gtttgaatga acagcctagc ttcacttcaa
     8341 ccgcctccgt ggggcgcgcg acctcccacg gatcgccgct gcgaatccag ttgtccggat
     8401 tccccttctg ccagccgtcc acaatctgtt gcttgaacat cccatattca tagcggagac
     8461 cgcatcccac agccggcagt tgcatacttg ccaaagagtc cagaaagcag gcggcaagac
     8521 ggccgagccc tccgttgccg aggccagcgt caggctcttc ttcaatcact tccagccagt
     8581 cgaatccgtt ttctttggcg gcgtactcga ccagcgggct gagcaggaga ttgctgatgt
     8641 tgtttcgcag tgagcgccca acgaggaact ccatggagag gtaataaact cgcttgggat
     8701 tcagcttgtt gtaggtgttg cgagtcagca cccaccgttg tgcgagcacg tcgcgaatcg
     8761 agcgtgaaag agcttcaaag cgttcccgcg cgcttgagac agctgggtcg atgacgcgat
     8821 caaaaaccag atgccgctca aagaaagcat tttctgagcc cgcgaatgga attgggccgc
     8881 acccatattg gtgtaacagt tctgaaaccc gccattcttc cggcgtctta ggaactgctg
     8941 gaacttctgc cactgctgta ggcttcgcgc tcattacaaa cttcctcctg ggccgcactg
     9001 aactggttca gctatcgcgc cgaacccccc ttttctcgta gagcgcagcg cagttggtgc
     9061 tgtgctgcgc ttcttgttga acgtggtgat tccgtagggc ggttgactgc cctgaaatca
     9121 gttatcagtg tgacgatgcc accagctctg ggtgggcagc aggttctcct tcaggcgact
     9181 ctgacagttt ggtttcttcc cagcggatca gcttcaggtc cagcacgaag attgagtaca
     9241 gcaccgggac aagaatcaga gttacgaacg tggcgatggt caagccgccg atctgcgcat
     9301 agcagagcgg ctcccacagc ggcccgccgt gcatcgcgag cggtaccaag ccgagcaccg
     9361 tggcgcccac ggtgatcatc accggccgca gtctcacgat gccggcgtcc agcagcgctt
     9421 cacggagtgg ctcgccacgt tcgtgcgctt cttcaatgaa gtcgaagagc acgatcacgt
     9481 ggcttacgat cactcccacc aggcttgcga ctcccaggaa cgccataaac ccgaaaggct
     9541 gccccatgat taccagtcca gccagcgcgc cagtcatgcc atacgggatg gctgcaaaga
     9601 ccagcagcgg cttcactgcg ttcttgaact gcatgaccag cgctaaatag atgagcagga
     9661 c
//
LOCUS       DASQYP010000145         8832 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_178288, whole genome shotgun sequence.
ACCESSION   DASQYP010000145 DASQYP010000000
VERSION     DASQYP010000145.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 8832)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8832)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8832
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_178288"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(699..1085)
                     /locus_tag="VE783_04610"
     CDS             complement(699..1085)
                     /locus_tag="VE783_04610"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4870 domain-containing protein"
                     /protein_id="HYX52709.1"
                     /translation="MAATTPTVGGAAPQPAVATTGMTSNVAGMLCYIVGFITGIIFLV
                     IEPYKRDSFVRFHAFQSIFFSVGCMIIMYALIFALPWTMWPLLALVRLLFFVGWIFLM
                     FKAYNNERFKLPVVGDLAEKQAATPA"
     gene            complement(1277..2413)
                     /locus_tag="VE783_04615"
     CDS             complement(1277..2413)
                     /locus_tag="VE783_04615"
                     /inference="COORDINATES: protein motif:HMM:NF012318.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trypsin-like peptidase domain-containing
                     protein"
                     /protein_id="HYX52710.1"
                     /translation="MKSLRPLILAVIFVSAFYVLTTHGGLHLGPSWVTRPEHVELSAS
                     AAPPGFDSEEQLNISVYKKALPSVVNITSTAVTFDFFYGAVPQQGMGSGFVIDGEGHI
                     LTNYHVIENARQLEVTTSDKKKYKAQIVGIDPPHDLAVIQIPTKSVQAAEIGDSKDLV
                     VGQKVFAIGNPFGLSGTMTRGIISSIRSVRGERGFIDEAIQTDAAINPGNSGGPLLNS
                     RGQVIGINSMILTGGAEQSAGIGFAIPINTAKAVLDDLVHLGRARYPTLGVGTIPIGP
                     EIADQLGLSADSGLLVVQVVPGSAAERSGLRAGTERAYWGNTPITLGGDLIVAIDGQP
                     VTDQQELSHVMQKHRAGDTVTLTIYRGKNKMDIKVALGENKGRA"
     gene            complement(2417..3049)
                     /gene="coaE"
                     /locus_tag="VE783_04620"
     CDS             complement(2417..3049)
                     /gene="coaE"
                     /locus_tag="VE783_04620"
                     /EC_number="2.7.1.24"
                     /inference="COORDINATES: protein motif:HMM:TIGR00152.1"
                     /note="Dephospho-CoA kinase (CoaE) performs the final step
                     in coenzyme A biosynthesis; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004140 - dephospho-CoA kinase activity
                     [Evidence IEA];
                     GO_process: GO:0015937 - coenzyme A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dephospho-CoA kinase"
                     /protein_id="HYX52711.1"
                     /translation="MVRVGLTGGIACGKSTVGKMLSDMGAHVIEADTIAHELYRPGEP
                     VYLELIDKFGGDILRPDGEIDRQRLATVAFDGGRVEELNKIVHPAVLKRQEQWMFQIG
                     NKDPYSIVVVEAALIVEAGARGRFDKLIVVTCKPEQKVARYAQRAGLPEAAARAEVER
                     RSKAQLSDDEKVRRADYVIDNSGPLDLTRHQLERIYSELKVLAKRLAFER"
     gene            complement(3054..3983)
                     /gene="folD"
                     /locus_tag="VE783_04625"
     CDS             complement(3054..3983)
                     /gene="folD"
                     /locus_tag="VE783_04625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016291047.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004488 - methylenetetrahydrofolate
                     dehydrogenase (NADP+) activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional methylenetetrahydrofolate
                     dehydrogenase/methenyltetrahydrofolate cyclohydrolase
                     FolD"
                     /protein_id="HYX52712.1"
                     /translation="MPTTAASVLDGTKIAAQIRSEVAAEVRQLTAQSRPPGLAVILAG
                     NNPASEIYVRNKIKACQEVGIYSEKITPSANVSTAELLQTVEELNRRDEIDGILVQLP
                     LPDGVDAKKVLLAVSPDKDVDGFHPLNAGRLAQQRPGLTPCTPAGVIEILKRSSIAIE
                     GAHAVVIGRSDIVGRPMALLLLNNNATVTICHSRTSGLAQIARQGDILVAAAGKPGLV
                     TEEFVKRGAVVIDVGIHRVDKQEDFNKFFAGDPEREKTFREKGSVLLGDVHPRAAQIA
                     GAVTPVPGGVGPLTIAMLMANTVKAFRLRREQA"
     gene            4089..4265
                     /locus_tag="VE783_04630"
     CDS             4089..4265
                     /locus_tag="VE783_04630"
                     /inference="COORDINATES: protein motif:HMM:NF015899.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Trm112 family protein"
                     /protein_id="HYX52713.1"
                     /translation="MMLKKLLDILVCPVPECRKPLRLAEDEQSLACTGCGRIYPIRDG
                     IPILLKHEAALPEK"
     gene            4329..4583
                     /locus_tag="VE783_04635"
     CDS             4329..4583
                     /locus_tag="VE783_04635"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52714.1"
                     /translation="MQGPSAARQSFKSGEVAEQSGVYNVVHDQHRGQHLATVFKGQKF
                     PSCARCGDRVRFLLVRPAALIAEDSDFQQGSSENPKSPER"
     gene            4668..4985
                     /locus_tag="VE783_04640"
     CDS             4668..4985
                     /locus_tag="VE783_04640"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52715.1"
                     /translation="MQVQRKAVPIWQSRTTRPVRIKGGGKSRPHSGSSREKGNSLFTA
                     GDLVRETGIYEVVHDAAHRVAHEVVMLSGDAFPPCDTCEQKVRFRLVRTAPYIFQDED
                     FAE"
     gene            complement(5082..5999)
                     /gene="galU"
                     /locus_tag="VE783_04645"
     CDS             complement(5082..5999)
                     /gene="galU"
                     /locus_tag="VE783_04645"
                     /EC_number="2.7.7.9"
                     /inference="COORDINATES: protein motif:HMM:TIGR01099.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003983 - UTP:glucose-1-phosphate
                     uridylyltransferase activity [Evidence IEA];
                     GO_process: GO:0009225 - nucleotide-sugar metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UTP--glucose-1-phosphate uridylyltransferase
                     GalU"
                     /protein_id="HYX52716.1"
                     /translation="MKMRVRKAVFPAAGLGTRFLPATKAQPKEMLPLVDKPIIQYGVE
                     EALAAGCDQIIIITGRGKTAIEDHFDVSYELEKMLEERGKTELLAIVRQISDMIHVAY
                     VRQKEAMGLGHAVLMARELVGNEPFAVLLADDVIDADKPCLKQMMEVFEESQCSIVAT
                     QEVNGPAISSYGVLDADRIDGKFNGRAYNVKNLVEKPRMEDAPSNLAIIGRYILTPSI
                     FDTLERTPLGAGGELQLTDGLRGLLKAGEKIYGYTFEGKRHDTGDKLGFLKATVEFAL
                     KRGDLGKPFADYLKTLELFAERYKEEMVA"
     gene            6149..7597
                     /gene="der"
                     /locus_tag="VE783_04650"
     CDS             6149..7597
                     /gene="der"
                     /locus_tag="VE783_04650"
                     /EC_number="3.6.5.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR03594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0043022 - ribosome binding [Evidence IEA];
                     GO_process: GO:0042254 - ribosome biogenesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome biogenesis GTPase Der"
                     /protein_id="HYX52717.1"
                     /translation="MTKSRLPLLAIVGRPNVGKSTLFNRLVGARRAIVGDEPGITRDR
                     LYGEVYWNGRRLRVVDTGGIIPDDKEFIPAEIFRQARVALEEAAAIVMVVDARTELAA
                     PDMELARLLQRLGKPLFLAVNKVDTTKMEAAAENFRTLGIQNLHPVSAEHGTGSAELL
                     EAVLHVIPETEAEREPEQARAQEPEADAELEEQKPDRPEEPRETKVAIIGHPNVGKST
                     LLNALTGSTRAIVSPIAGTTRDAVDELIEEDGREYRFIDTAGIRRKGKTHLMAEKLSV
                     VMARKHLEAADVALLVIDAVEGVNALDATIGGYAHESGRSVIIVVNKWDLVSSGRSDG
                     RAPADRKVYEQQVRRALKFLDYAPIVFVSAAEGKNLDKVFKSLELVATERRKRISTSQ
                     MNRFIENVDFDRAAVPYRQKVKIFYMTQSNVAPPTFILFTDKDVKLHFSYERFLENQI
                     RKAFGFIGTPIWIKNRPRKKVDLGPRKDKRRR"
     gene            7700..>8832
                     /locus_tag="VE783_04655"
     CDS             7700..>8832
                     /locus_tag="VE783_04655"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HYX52718.1"
                     /translation="MLLQEIRHAFRLIVRSPGFTIIAILSLALGIGANAAMFSLADAL
                     VLRPLPVSDPNSVMDVSAVHPGTDSGSLTYPDYLDLRNSARSLDGLVAFELSTFSMAR
                     TKDDVARMRMGMLVSDNFFQVMGVQPVLGRGFLPKETSATAVQPAVILGHDFWRDQFQ
                     SDPQVAGRTVRIAGIDCNVIGVAPERFTGMDQYVRPSFFIPAAMMQRLTAAEKDPLKD
                     RNAFGWNAEARLRPGISQATAQSELSTLWKSLQQEYPGPSRNRNMAVRTQLQARFASD
                     PFDPILATMLMALATLVLLIACANLANLLLTRARGRAREIAVRIALGVSRARLLRQLM
                     IENVVLALIGAVAGLGFGYLGIWFLRNIPIPTDLPIVIAPQLDG"
BASE COUNT         1788 a         2665 c         2454 g         1925 t
ORIGIN      
        1 tgctttgcgt tggcgggttt ccctttttcg aagcttcgat tgtcttgcct cgaacccgcg
       61 ttctttgggg gttgtattca gtcccgagcg cagcgaaggg tccctttggc cacgagaatc
      121 tccaggattg ccatccttga agcctaacaa attgaaccgg tctcaaatga gttgatcggg
      181 ataagacact gtgtagcaca ggcgcctcgc ctgtgccggt tactctccac aggaccagcc
      241 acttcgcctc atcattcggg tcagatcgtc tcttgtatga aacgttagga agtacgaacc
      301 gccgtctctt tcaaggttcg gccatttgcg gcagtagatt gtcattcttg cggcacaggc
      361 gaggcgcctg tgctacacag ttaagaaatt gcgcgttgtc agagacatca aaacacgtag
      421 agtcggcggc atgtcgcggc tcactgttgg gcgaagccat caacatgccg cgttcaaaga
      481 ttgtgtagga cagtcgccct cgcctgtccg gttttttcaa aattgtggtg acgtcacggg
      541 cttgtcgtcg gccacgctta cgttgctggc ccattgttgc agcgccgcca gcctaccctt
      601 gttggtgatc cctgtagtct ttgaacgcag aagcgtagag ccgcggcatg ccgcggctca
      661 cttgtaccac tccgtattat ttgtaacccg gcgctgcgtt acgcaggcgt agccgcctgt
      721 ttctctgcca agtcgccaac caccggcagc ttgaatcgct cgttgttgta cgccttgaac
      781 atcaggaaga tccaacccac gaaaaacagc agcctgacca gcgccagcaa cggccacatc
      841 gtccatggca gggcgaagat caatgcatac atgatgatca tgcagccgac ggaaaagaaa
      901 attgactgga aggcgtggaa gcgcacgaat gagtcgcgct tataaggctc aatcaccagg
      961 aagatgattc cggtgatgaa gcccacaatg taacagagca ttcccgccac gttgctcgtc
     1021 attcccgtcg tcgccactgc cggttgcggg gccgctccgc cgacggtggg tgttgttgcg
     1081 gccacaggcg caccgcactg ttgacagaaa gtcgaccccg cggacacttg cgtgccgcac
     1141 ttcgcacaaa atgccatacg cttttctctc ctccagagtt tcagggaagc acttagcgca
     1201 atagcttaga cccgttcggc acgaatgcaa aggatactga tgccgtaatc ctttaatttt
     1261 ctggtaatgc ttcccatcag gctctcccct tgttctcccc caaggccacc ttgatatcca
     1321 tcttgttctt gccccggtag atcgtcaggg taacagtgtc ccccgcgcga tgcttctgca
     1381 ttacgtgaga gagctcctgc tggtccgtta ccggctggcc gtcaatggcg acgatcaggt
     1441 ctccccccaa tgtgatcggc gtattgcccc agtaggcgcg ctcggttcct gcccgcaggc
     1501 ccgaccgctc ggcagcgctg cctggaacca cctggaccac cagcagcccc gaatctgcgg
     1561 aaagcccgag ttgatcggcg atttccggcc caataggaat ggtgccaact ccaagcgtgg
     1621 gatagcgcgc ccgcccaagg tggacaagat catccagcac tgccttggca gtattgatcg
     1681 ggatggcaaa gccgattccc gcactctgct ctgcgcctcc ggtcaggatc atggagttga
     1741 ttccgatcac ctgtcctcgc gagttaagca gcggtccgcc ggaattgccg gggttgatgg
     1801 ccgcatccgt ctggatggct tcatcgataa acccgcgctc cccgcgtacc gaacgaatgg
     1861 agctgatgat gccgcgcgtc atggtgccgc tcaggccaaa cggattgccg atggcaaaga
     1921 ctttctgccc gaccacgagg tctttggagt ccccgatttc tgccgcctgc accgattttg
     1981 tcggaatctg gattaccgcc agatcgtggg gcggatcaat gcccacgatc tgcgccttgt
     2041 acttcttttt atcgctggtt gtcacttcca gttgccgtgc gttctcgatc acgtggtaat
     2101 tcgtgaggat gtggccttcc ccgtcaatta cgaatccgga ccccatgccc tgctgcggaa
     2161 cggccccgta gaagaaatca aatgtcactg cggttgaagt gatgttgacc actgaaggca
     2221 gggccttctt ataaacagag atgtttagct gctcttctga atcgaagccg ggaggcgctg
     2281 cggaggcgct cagctcaacg tgttcaggcc gggtcaccca cgatggcccg agatgaaggc
     2341 ctccgtgggt ggtcaaaaca taaaaagccg atacgaagat gacggcaaga attaagggac
     2401 gcaacgactt catttctcac ctttcaaaag ccagccgctt ggccagcacc tttaattcag
     2461 aataaatcct ttccagctga tggcgtgtga ggtcgagcgg gccggagtta tcaatcacgt
     2521 aatcggcgcg gcggaccttc tcgtcatcgc tgagctgggc tttgctgcgg cgctccactt
     2581 cggcacgggc cgccgcttcc ggcaatccgg ctcgttgcgc gtagcgcgct accttttgct
     2641 cgggcttgca ggtgaccaca atcagcttgt cgaaacgtcc gcgcgccccg gcttccacga
     2701 tcaaagctgc ttccactacg acgatggagt atggatcttt gttcccgatc tggaacatcc
     2761 actgttcctg ccgcttgagc accgccgggt gcacgatctt gttcagctct tccacacggc
     2821 cgccgtcgaa ggccaccgtg gcaagacgct gccggtcaat ttcgccgtcg ggccgcaaga
     2881 tgtccccgcc aaatttgtcg atcagctcca ggtaaaccgg ctcgccgggg cggtagagct
     2941 catgcgcgat tgtgtcggcc tcgattacgt gagcgcccat atcggagagc atcttgccca
     3001 ccgtggattt cccacaggcg atgccgccgg tcaggccgac tcggaccatg tgtttaggcc
     3061 tgctcccgtc gcagtcggaa cgccttgact gtgttggcca tgagcatggc gatggtgagc
     3121 gggcccaccc cgccgggaac cggggtaacg gcgccggcga tctgcgccgc ccgaggatga
     3181 acgtctccca acagcactga gcctttctcg cggaaggtct tttcccgctc ggggtcgccg
     3241 gcaaaaaact tgttgaagtc ctcctgctta tcgacgcgat ggattcccac gtcaatcacc
     3301 acagctccgc gcttcacgaa ctcttccgtc accagccccg gcttacccgc ggccgccact
     3361 aggatgtcac cttggcgcgc gatctgcgcc agcccggacg tgcgcgagtg gcaaatggtt
     3421 acggtggcgt tgttgttcag aaggagcaga gccatagggc ggccaacgat atcgcttcgc
     3481 ccgatcacca ccgcgtgcgc gccttcaatt gcgatgctgc tgcgcttcaa aatctcaatc
     3541 accccggccg gcgtgcaggg cgtgagcccc ggccgctgct gcgccagccg tccggcattc
     3601 aggggatgaa aaccatccac atccttatcc ggagagaccg ccagcagcac tttctttgcg
     3661 tccacaccat cgggcagcgg aagctgcacc aggattccgt caatctcgtc gcggcggttc
     3721 agctcttcca ccgtttgcag aagttcagcg gtgcttacat tcgcggaagg cgtgatcttc
     3781 tcgctgtaaa tcccgacttc ctggcaggcc ttgatcttgt tgcggacgta aatctctgaa
     3841 gccggattgt tcccggccag aatcacggcc agcccgggtg ggcgcgattg cgctgtgagt
     3901 tggcgcacct ctgccgccac ttcgctcctg atctgcgcgg cgattttggt gccgtccagg
     3961 acgctggctg ctgttgtggg catatttcgc tcagtatctt ataggaacag ctccgcaaat
     4021 ccaccccgga gccggtcgcg acaggccaat ccccgcaacg cttcctggcc atttacaatc
     4081 ctgaactgat gatgctgaaa aagctgctcg acatcctcgt ctgtcctgtc ccggaatgcc
     4141 gcaagccgct ccggcttgcc gaggacgagc aatctcttgc ctgcaccggc tgcggacgca
     4201 tttaccccat ccgcgacggc attccgatcc tgctgaagca tgaggcggcc ttgcctgaaa
     4261 agtaagcccc agtactgtcc ttaatctctg tttagattcg ccgtaaccct cgggtacact
     4321 aaggagccat gcagggaccg tcggcggcca ggcagagctt caagagcggt gaagtggccg
     4381 aacaatccgg ggtgtacaac gtggtgcacg atcagcaccg tggacaacac ctggccactg
     4441 tgttcaaagg acagaaattt ccgtcctgcg cccgctgtgg cgaccgcgtg cgtttcctgc
     4501 tggtccgccc ggccgccctc attgccgaag actcagattt ccaacaaggc agctccgaaa
     4561 atccgaaatc accggagcgg tgacgcctct atatgtgtgg ttaggtgtaa aaagtgcttg
     4621 cggcatcttg cagcgccgga gtatataagc tggcaaatct aaaacccatg caggtacaaa
     4681 gaaaagcggt acccatctgg caatcccgaa ccacccggcc ggtacgtatc aagggcggtg
     4741 gcaaatcaag gccccactcc ggctcctcgc gagagaaagg taattccctc ttcaccgccg
     4801 gcgacctggt gcgcgaaacc ggtatttatg aggttgtgca tgatgccgct catcgcgtgg
     4861 cccatgaggt cgtcatgctc agcggtgacg ccttcccgcc ctgcgacacc tgcgaacaga
     4921 aggttcgctt ccgcctggtg cgcacagcgc cgtacatctt ccaggacgaa gacttcgctg
     4981 agtaggcagg ctggcggaac tactttcatc agcaataaag cgcactaaag cgaatgagac
     5041 gtggcgcgcc acgtctcact gtcatttgag cttttctctg cttaagcgac catttcttct
     5101 ttgtaccgct ccgcgaacag ctccagcgtc ttcaggtagt ccgcgaaggg cttgcccaga
     5161 tcgccgcgct ttagcgcaaa ttccactgtc gcctttagga aaccgagctt gtcgccggtg
     5221 tcatggcgtt tgccttcaaa ggtgtagccg taaatctttt cgccggcttt gagcaggccg
     5281 cgcaggccgt cagtgagctg aagctcgcct cctgcgccca agggcgtgcg ctccagcgtg
     5341 tcaaagattg aaggtgtaag gatgtagcgt ccaataatcg ccagattcga aggcgcatcc
     5401 tccatcctcg gcttctccac cagattcttg acgttataag cacgaccatt gaactttcca
     5461 tcgatgcggt cagcgtcaag cacgccatac gatgagatcg ccgggccgtt tacttcctgc
     5521 gttgctacaa tcgagcactg cgattcttca aaaacctcca tcatctgctt taaacagggc
     5581 ttgtccgcgt cgatcacgtc gtccgccagc agaaccgcga aaggctcgtt ccccacaagc
     5641 tcgcgtgcca taagcacggc atgccccagc cccatcgctt ccttctgtct tacgtaggcc
     5701 acatggatca tgtcagagat ctggcgcacg attgccagca actcagtttt tccgcgttct
     5761 tccagcatct tttccagttc gtagctgacg tcaaaatggt cctcaatcgc ggtcttgccg
     5821 cggccggtaa tgatgatgat ctggtcgcat ccggcggcca gcgcttcctc tacgccatat
     5881 tgaatgatgg gtttgtccac cagcggcagc atttcttttg gttgtgcctt ggtggcgggg
     5941 agaaaacgcg tgcccagtcc tgcggcgggg aatacggcct tgcgtaccct catcttcata
     6001 ggttttagtc ctgtataacg ctatctgaga tgcagaaagt gtatctcacg gtgttcgctg
     6061 cggaaacagt ttgcctgcaa tgacagcgca ggcaacgatc agttacctta aaagatggct
     6121 taaggaacca acggctcttg tggcgaccat gaccaaatcc cggctcccgc tgctggcaat
     6181 tgtcggccgg ccaaacgtgg gcaaatccac gctcttcaac cggctggtcg gcgcgcgacg
     6241 tgccattgtt ggcgacgagc ccggcattac ccgtgaccgg ctttacggcg aagtgtactg
     6301 gaatggccgg cgacttcgcg tggtagatac cggcggcatc atcccagacg acaaagaatt
     6361 tattccagct gaaattttcc gccaggcgcg agtcgcactg gaagaagccg ctgccatcgt
     6421 aatggtggtg gatgcgagaa ccgagctcgc cgctcccgac atggagctgg ctcgcctgct
     6481 gcaacgcctg ggcaagccgc tgtttctcgc cgtgaataaa gtcgacacca cgaaaatgga
     6541 ggccgctgcg gagaactttc gtacgcttgg aatccagaat ctccatcccg tttcagccga
     6601 acacggcacc ggcagcgccg aattgctcga agcggttctc cacgtaattc ctgaaaccga
     6661 agcagaacgc gagcctgagc aggctcgtgc acaagagccg gaggccgacg ctgaacttga
     6721 ggagcagaag ccagatcggc cggaagagcc tcgtgagacc aaggtcgcca tcatcggcca
     6781 ccccaacgtg ggtaaatcaa ccctgcttaa cgcactgact ggaagcacgc gcgcgattgt
     6841 ctctccaatc gccgggacca cgcgcgatgc cgtggacgag ctcatcgagg aagatggtcg
     6901 cgaatatcgc tttatcgaca cggccggaat ccgccgcaaa ggcaagactc acctcatggc
     6961 ggaaaagctc tccgtggtca tggcgcgcaa gcacctcgag gccgcggatg tcgccttgct
     7021 cgtgattgat gccgtggaag gcgtaaacgc gctagatgcc accatcggcg gctacgcgca
     7081 tgagagcgga cgctcggtca tcatcgtggt gaacaagtgg gacctggtca gttccggccg
     7141 cagtgacggc cgggcaccag cggatcgcaa agtctatgag caacaggtgc gcagggcact
     7201 caagtttctg gattatgccc caatcgtgtt tgtctccgcg gctgaaggta agaatctgga
     7261 caaggtcttt aaatccttgg agcttgtggc gaccgagcga cgcaagcgca tcagcacctc
     7321 acagatgaac cgctttattg aaaacgtgga tttcgatcgc gcggctgttc cgtaccgtca
     7381 gaaagtgaag atcttttaca tgacgcaatc gaacgtcgcg cctcccactt ttatcctttt
     7441 tactgacaag gacgtaaagc tgcacttttc atacgagcgc ttcctggaaa accagatccg
     7501 taaggccttc ggtttcatcg gtacgcctat ctggatcaag aatcgaccaa ggaagaaggt
     7561 cgacctgggt ccgagaaaag acaagcgccg aaggtaagcg gagaggagat aagcggcgta
     7621 catttttccg cctggaacgt ccacaaatat ggaacctatc cggcagtttc gctcgtaccg
     7681 gtaaatgtaa ggaggagcca tgctcctgca agagatccgt cacgccttcc gcctgatcgt
     7741 gcgtagccct ggctttacca tcattgccat cctctccctg gctcttggca ttggagccaa
     7801 tgcggccatg ttcagcctgg ctgacgctct ggttctgcgg ccgcttccgg tctcagatcc
     7861 aaatagcgtc atggatgtga gcgcggttca tcccgggacg gatagtggca gcctgaccta
     7921 ccccgattat ctcgatctgc ggaacagcgc caggtctttg gacgggttgg tcgctttcga
     7981 gctttccacc tttagcatgg cccgcacaaa agacgacgtc gctcgcatgc gcatgggaat
     8041 gctggtgagt gacaacttct ttcaggtcat gggtgtccag ccggtgctcg ggcgcggctt
     8101 cctgccgaaa gagaccagcg ccaccgcagt ccagcccgcg gtgatccttg ggcatgattt
     8161 ctggcgcgac cagtttcaat ctgatccgca ggtagctggt cgcaccgtgc ggatcgcagg
     8221 catcgattgc aacgtgattg gcgttgcgcc ggagcgattt actggtatgg accagtacgt
     8281 tcgcccctcg tttttcattc cggcggcaat gatgcagcgc ctgaccgcag ccgagaaaga
     8341 tccattgaag gaccgcaatg cttttggctg gaacgccgaa gcgcgcttgc ggcctggcat
     8401 ttcccaggca accgcgcaga gcgagctgtc cacactctgg aagtcactgc agcaggagta
     8461 tcccggacca tcgcgcaacc ggaatatggc tgtgcgcacg caattgcagg cgcgctttgc
     8521 ctctgatcca ttcgatccca ttttggcgac catgctcatg gcccttgcca cgctggtact
     8581 gctgattgca tgcgctaacc tcgcaaatct cttgctcacc cgcgctcgcg gacgcgcacg
     8641 cgagattgct gttcgcattg cgctgggcgt cagtcgagcc cgcttgcttc gccagttgat
     8701 gatcgaaaac gtggtgctgg ccctcatcgg ggccgttgcc gggcttggct tcggctatct
     8761 ggggatctgg ttcctgcgca acattcccat tcccaccgat ctgccaatcg tgatcgcacc
     8821 gcagctggat gg
//
LOCUS       DASQYP010000146        17569 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_133389, whole genome shotgun sequence.
ACCESSION   DASQYP010000146 DASQYP010000000
VERSION     DASQYP010000146.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 17569)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17569)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17569
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_133389"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(20..2899)
                     /locus_tag="VE783_04660"
     CDS             complement(20..2899)
                     /locus_tag="VE783_04660"
                     /inference="COORDINATES: protein motif:HMM:NF013283.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0019867 - outer membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="POTRA domain-containing protein"
                     /protein_id="HYX52719.1"
                     /translation="MFSQEPGTAPTLSYEGQKVSSVEVAGRPDLNRHSVEALIKQPLN
                     APYREAEVNATIAALKQLNGVTKVTTQVEPEANGLRVLFVLEPGYYFGVFQFPKGTSN
                     FTYTRLLQAANYPRQEPYTRARVDEATSNLLSFYHQAGYFRAAVEPELDIDQQHGIVN
                     VNFLSTLRKRAKFGEVSIEGLQPDEEKQLESSLRSLRARIRAAYIKPGKPYTLKRLQN
                     AIKFLQTRLGSQHYLAARVRLVSTVYHDDTNRADIHIHIEKRSQIRIQVAGAHVWGRT
                     QKKLIPIYQENSVDPDLVLEGQQNLQSYFEAKGFFDAKVQSHVEKQPTGYTIRYDIAK
                     GKRGKVTGLEFKGNQHFSDGKLKDHVAIEKARRYIPFSHGKYSEKLVRTSVKNLEGLY
                     QAAGYSKVSVTPQVSNQNGKLSVAFLVNEGERDIVESLKVEGNNSIPEYKLVPKGLNL
                     QPGKPYSQQLMDQDRDLIMANYLDHGFLTMVFRAQVNAPKNDPHHIQVVYMIDEGPQV
                     YTAKVDPVGAPNSNKDVILKSANIKVGKPLSQSALLRGEGQMYSMGGAFDWANVDSRR
                     PITEQKEAEVLIRLHEAKRNTITYGFGFEVTKRGGSVPGGTVAVPGLPPVGLPTDFKA
                     SEQTFWGPRGSIEYTRRNFRGRAETLSAGVFGARLEQRATVGWANPTFWNSVWSSTLS
                     ASIDRSSQNPIFTSRIGQAGLQFERYLDAKKTKSVYLRYNFSRTSLTNVLIPGLVLPE
                     DQNVRLSTLSASFIRDTRDDVLDAHRGLYESFQGDLNPSFLGSNTNFTRFLGQTAYYK
                     PVFSKSVVWANSIRVGVEESFAGAHIPISESFFSGGGSTLRGFPLNGAGPQRPVQVCG
                     AGQTAPNCPNITVPVGGPQLLILNSELRFPSSLLNKLGGVVFYDGGNVYSHLGKPWDG
                     YSNTVGIGARYATPVGPVRFDIGRNLNPVTGVSAWQYFITLGQAF"
     gene            3323..3472
                     /locus_tag="VE783_04665"
     CDS             3323..3472
                     /locus_tag="VE783_04665"
                     /inference="COORDINATES: protein motif:HMM:NF039824.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lmo0937 family membrane protein"
                     /protein_id="HYX52720.1"
                     /translation="MLWTIFAILLILWLLGWGFHIAGSVIHLLLVIALVVLVIQLITG
                     RRAVV"
     gene            complement(3501..3800)
                     /locus_tag="VE783_04670"
     CDS             complement(3501..3800)
                     /locus_tag="VE783_04670"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52721.1"
                     /translation="MMGNPAATLKVPIISGMARGWESKSVEAQMESANTDGAKRKQPM
                     DDSEKQSRREVEQLKLSQAYLRHQLESSTHERYSESLRHALSEVEEKLRRLEAKS"
     gene            3830..4345
                     /locus_tag="VE783_04675"
     CDS             3830..4345
                     /locus_tag="VE783_04675"
                     /inference="COORDINATES: protein motif:HMM:NF039588.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016829 - lyase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MaoC family dehydratase"
                     /protein_id="HYX52722.1"
                     /translation="MPTKPGWTGRFFEDFTVGDIYEHWPGRTVLAADNVWFSLLTQNN
                     NPIHFDANYSAGTEFGRPLVEGAFTLALVTGQSVADVSMNALANLGWDEVRTPNPVFE
                     GDTVYSRSEVLETRESKSRPNVGIVRVKTTGYKQDGKVVIEFQRTVMVFKRGQGPKRP
                     TPLRATRSESS"
     gene            complement(4308..5129)
                     /locus_tag="VE783_04680"
     CDS             complement(4308..5129)
                     /locus_tag="VE783_04680"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HYX52723.1"
                     /translation="MAKRILFVDDEAGIRMTLGPILERNGFEVTITATVADALHEINH
                     NKFDVLLSDLNIGQPGDGFTVVSAMRRVQPEAATFILTGYPDFETALQAIRNQVDDYL
                     LKPTDVPTLLGAIERRLQHRRPAIPELAVKRVSQLLRETAADIAEQWLEDVQKEKELQ
                     GFRLSREERARHILPLLRQLAHRVDESSGYEPDTLIKQGQQFGQRRAELGYSAHLVVV
                     EMRILQRVISSVLQHNLIRMDLSSVIADMMEVGEGLQEHLEHSIRSFQSASREAA"
     gene            complement(5279..5875)
                     /locus_tag="VE783_04685"
     CDS             complement(5279..5875)
                     /locus_tag="VE783_04685"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52724.1"
                     /translation="MRKTTLLLSLFCLLGVAVMPAHAQQLDIAFGLSTVMAPDADVVN
                     QVPSLRGGGYMSFSGDFLFYHNFGVGMTAAWRAHQNIDQTAFQPFRPIFYEFNGVYQP
                     PMGKRAQADLQGGIGFESIRFYEPFFTCGAFSGCTNFTSSNHFLGHVGGGVKIYVTNS
                     VFIEPMAHFYFVHNNFEFSSGHAQRYGAQIGYSFKNRE"
     gene            6110..6754
                     /locus_tag="VE783_04690"
     CDS             6110..6754
                     /locus_tag="VE783_04690"
                     /inference="COORDINATES: protein motif:HMM:TIGR01509.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAD-IA family hydrolase"
                     /protein_id="HYX52725.1"
                     /translation="MIIECAAVLFDLDGVLVDSTPAVARVWRAWALKRGLDPAWTVQQ
                     AHGRRSIETVRALAPELDAEVENRNVEKMEIEDREGVVQLPGALQLMSNLPSERYAVV
                     TSATRPLAEARLLYAGLPVPKNMITASDVVEGKPSPEPFLKGAQLLGFAPRDCLVFED
                     APAGIAAARAAGMRVIALQTTYPADELQSADFLVPSLQAVHNRPLANALQLEIE"
     gene            6836..7261
                     /locus_tag="VE783_04695"
     CDS             6836..7261
                     /locus_tag="VE783_04695"
                     /EC_number="1.11.1.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017978306.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005829 - cytosol [Evidence IEA];
                     GO_function: GO:0004601 - peroxidase activity [Evidence
                     IEA];
                     GO_function: GO:0051920 - peroxiredoxin activity [Evidence
                     IEA];
                     GO_process: GO:0006972 - hyperosmotic response [Evidence
                     IEA];
                     GO_process: GO:0006979 - response to oxidative stress
                     [Evidence IEA];
                     GO_process: GO:0033194 - response to hydroperoxide
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="OsmC family protein"
                     /protein_id="HYX52726.1"
                     /translation="MQRNASAHWSGGLKDGKGTLTSPSGVLKQTPYSFATRFETQPGT
                     NPEELIAAAHAGCFSMALSAQLGNAGMTAQSIDTTATVTLEKVEGGFAVTSSHLQVKV
                     KIPGADKAKFDEAAKNAKEGCPISKLLNAKITMDAQLES"
     gene            7385..8452
                     /locus_tag="VE783_04700"
     CDS             7385..8452
                     /locus_tag="VE783_04700"
                     /inference="COORDINATES: protein motif:HMM:NF022588.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2911 domain-containing protein"
                     /protein_id="HYX52727.1"
                     /translation="MRKYIPPALLALALLLSTAPATFAQSALLNLPRQSQHATVVQRV
                     GITDITINYHRPTINGRKVWGGLVPYGQVWRAGANENTTIKFTDPVTVEGQTLAAGTY
                     GLHMIPNENEWTVIFSRAATAWGSFSYDQKEDALRVTVKPQSAEMHEAVTYDFTDIKP
                     TETTVTLFWEKVAVPFKVSVNTNEVVADSLHRQLRGLPQYTWEAWDEAADYLLSSKSD
                     LEEALTYANRSIQNEERFENLMSKSQILDALNRPKDAAPVKEKAVSLATAIQLHGYGR
                     QLQIQGKQQEAFDVFRTNIKKYPDHWVSHNEAARMACAEGNFDKAVKEMKLASAAAPD
                     QIKTPLDGLVKRLEAKQDINK"
     gene            8489..9916
                     /locus_tag="VE783_04705"
     CDS             8489..9916
                     /locus_tag="VE783_04705"
                     /EC_number="3.2.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF013682.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006486 - protein glycosylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 47 protein"
                     /protein_id="HYX52728.1"
                     /translation="MALHLFLFGWIIMVPIMRLSIWVCALPLLLCAGASFSLHAQNIR
                     VPADPGPMAKQVRSEFLFAWNEYKNHAAGHDELRPMSQKGHDWYSQSLYMTPADALDT
                     MILMGLTKEADETREMIAKNLSFDKDIEVQVFEVTIRLMGGLLSGYQLTGDERLATLA
                     QDLGTRLLPAFESPTGMPYRFVNLKTGKTRDAISNPAEIGTLLLEFGTLSKLTGKPVF
                     YEKAKRAVSELYVRRTKLGLVGSTINVETGQWVDTTSHISGGIDSYYEYLLKSWLLFG
                     DKDCKRMFIASMDAVNHYLAQDSKKSGLWYGQADMNTGKLVSTKFGALDAFFPAVLAR
                     SGDVQRARRLEESAYKMWTTFGVEPEEIDYTNMKVLEPGYMLRPEIIESAYYLYFFTK
                     DDSYQDMASNFLLSLSRCCKTDNGYTVLRNVSTREKADIMPSYFLAETLKYLYLLFAP
                     RDTVDLNKVVFNTEAHPLQRTWAVK"
     gene            10714..12135
                     /locus_tag="VE783_04710"
     CDS             10714..12135
                     /locus_tag="VE783_04710"
                     /inference="COORDINATES: protein motif:HMM:NF025910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HYX52729.1"
                     /translation="MKYCFQAAVLLLVCSAYGQGVPQGRVAPAGDPAQIVTQSEQMLD
                     ARAPQQALNVVQDALRRFPDNEDLELELARIYAYQKQDKLAMQAVQSVLQKHPDSREG
                     KLVLAQLYGYRQAYRLSDAIYRDLLAANPADETAALGLIHNLALQGHRDEARAQLALA
                     LAKNPSSLLLQQYSDALQSGSAENPELPRRSFRVQSGSSYFSDSSGNHAVFTSEGMNF
                     ELGRNVTTRLRMEETSLWKNGVSPAQVIGGWQEIRWKPSRFFALRTSGGGVRFADDSS
                     RGTYSGDLEVFPFKGLTLSGGYSRFPLIPTFEAAQDDLLAEGWHTRIDYRRYGFNITG
                     SLFLNHLSDGNRGEREFAEAMKWFGHSRISIGAGYAFRHLHMKEQLNNGYFSPGQYHS
                     HLGAGGLRLDLGKHYRGEYIGYLGGERINAGNYSGAGELLLRNEFFVRRWQFEANYSH
                     FQLVQSTAAFHANEVSGSAGYRF"
     gene            12165..13541
                     /locus_tag="VE783_04715"
     CDS             12165..13541
                     /locus_tag="VE783_04715"
                     /inference="COORDINATES: protein motif:HMM:NF025885.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54 dependent transcriptional regulator"
                     /protein_id="HYX52730.1"
                     /translation="MANQKFRILLVDDDDSVRSFLASVLKAEGYDCLSANSISAAEQV
                     LRQETIQLAFLDLYLGTANGLNVLDLIKVLQPHCACVMMTAQMSVETVAKSLGAGALE
                     YLSKPLLIDDLLAIVRKVQNSQQQAKAAAAVEDDGPETSIIGRTPKMLEVYRAIARVA
                     PADISVLILGPSGSGKELVARAIHDHSPRSKMPFVPVNCGALPENILESELFGHEKGA
                     FTGADSSRAGLFEAANAGTLFLDEISETRPSFQVNLLRAVQEQQIRRVGSHKYTPINV
                     RILAASNRDLTKMMATGQFREDLYYRLSVVEIRLPSLEERREDIPLLVQHFLKRANEK
                     NRRSVQITEAAVQALTNAAWPGNVRELENVVQRLAIFCTSGEIGIADIESERRPIAHG
                     NGSGNGHPEGSAVSAGSLEDMERVHIARVLQEHGGNKSRAANALGIERKTLYQKARRL
                     GIDLQVKK"
     gene            13538..15868
                     /locus_tag="VE783_04720"
     CDS             13538..15868
                     /locus_tag="VE783_04720"
                     /inference="COORDINATES: protein motif:HMM:NF017076.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CHASE2 domain-containing protein"
                     /protein_id="HYX52731.1"
                     /translation="MKWLGTNRHVGPISMWRWLRLNAVLLVLVLLVSLSFPVATLNKK
                     LSDMFFFMRPRQAESQHVALVLVDDASLARYGRWPWQRERLAELISAVSRQKPSAIGL
                     DVLLPEAEDERNDAALEKAIRSAINLVLAAKISSSPEGRMWIDPLPRFARAAIATGHV
                     QAMVDDDGLCRSIPLEEPAAEGLRPALALDIASLVNPEFARIAPHAQSSSGVERLESR
                     SLIINFRRQFIPAETPKPFAVVSAGDLLAGRSAPELAGKAVLIGFGSVEMSDRLFTPV
                     SGQLPMPGVEINANALETLLSGSTITRAGLEWQLPLVLSVSALSLWLVVRYPGARSLF
                     ALAVLLLLGYAGTFLLFERFHVLLLYGPVIVAIVLAAPLAQLENLVIIDREVTSRLQQ
                     LHQAISPASQSAIQLKGKSGRLHWKLGALSELQAELTSLYTFQQTLLETMREGLAVYG
                     EDGRLRFGNAPWKNFCARQGASPDTLQAITQLSSAWPELAVVAQTGGTWVETELPVGE
                     ELWHLYAVPLPWTSFAQHGAVMLIAEDITARRQRDQARSEALSFVTHELRTPLIAIQG
                     FSEMLMRYPNQTASSEAPATIFRESNRLVAMINTYLEVLRLDAGARPLKMSRTSIRAM
                     TEHVEKVVRPLATAAKMSVRTEIDSDDEFITCDETLIAGALLNLVSNAIKYGAAGTEV
                     LMRVTASEDEQEMEFEVNNAGPTIPASELKSLFERFYRPSRSESIPGWGLGLSFVRRI
                     CQQHGGRVEVSSEEKNGTSFVFTLPRGVREVSEVAQ"
     gene            15865..16767
                     /locus_tag="VE783_04725"
     CDS             15865..16767
                     /locus_tag="VE783_04725"
                     /inference="COORDINATES: protein motif:HMM:NF016648.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FecR family protein"
                     /protein_id="HYX52732.1"
                     /translation="MKTRIAVTLFLLALVCAIASAQEGDVPPAKAPFAGATVSDVKGK
                     VSIQLPGQMFHVATRSEVLPAETVIKTEAGHLLLRLSDGSDILVRSNTNLVLKQPEGG
                     TLRYLQVMFGRVRAEIQKRLGGAPGFQIGTPSAVISVRGTVFEVEVSRSGMTEVDVRE
                     GLVQLDATGGGSVMIRAGYSSRVGMSGSPETPRATRDMRPDLDRPGHNDRHGDDHDDD
                     AMKKLRASNDDHHDHDGGDSNRDSGGKGDSSGGSGSGSGSGSGSGSGPGDSGSGDHSG
                     DHGSDHGGDHGGGSGKPPEDQLIF"
     gene            16805..>17569
                     /locus_tag="VE783_04730"
     CDS             16805..>17569
                     /locus_tag="VE783_04730"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52733.1"
                     /translation="MGSAYFLPWYAPALVTPLTSSTAAINYRHGLGKREGAAPARQPG
                     FPSRTAMPNVPHSLGVAYFSMEIALDPGLPTYSGGLGILGGDTLRSAADMGLPMCGVS
                     LLHRKGYFDQHLDSIGNQTETSSSWRPEEHLQEMPGRAAIEIEGERVLIRAWQYLVRG
                     CNGQTIPVFLLDTALPENSAFAQSLTDELYGGDEHYRLCQEVILGLGGIAVLRQLGHH
                     RVLTYHMNEGHAALLALALLQEHLGGRSCNEATEADI"
BASE COUNT         3743 a         5177 c         4931 g         3718 t
ORIGIN      
        1 ccaattcacg agtgcaccat taaaatgcct gtcctaaagt aatgaagtat tgccacgcac
       61 tgaccccggt aaccgggttc aggttccgtc caatgtcaaa gcgcacaggc ccgaccggcg
      121 ttgcgtagcg agcgccaatg cccacggtgt tcgagtagcc gtcccacggt ttgccaagat
      181 ggctatacac gttgccgccg tcgtaaaaga ccaccccacc taacttgttc agcagcgaag
      241 aaggaaaccg caactccgaa ttcaggatca acaactgcgg accgcctacg ggaaccgtaa
      301 tgttcgggca gttcggagcg gtctgacctg cgccgcagac ctgcacaggc cgctgtggac
      361 ccgcgccgtt caagggaaat ccgcgcagcg tgctgccgcc gccagagaag aacgattcac
      421 tgatgggaat gtgcgctccc gcgaatgact cttccactcc tacccttatg ctgtttgccc
      481 acacaactga cttgctgaac accggcttgt agtaagcagt ctgaccaaga aatcgcgtaa
      541 aattcgtatt cgatcccaga aagctcggat tcagatcgcc ctggaagctc tcataaagcc
      601 cgcgatgcgc atccagcacg tcgtcgcgtg tatcccgaat gaaagatgca gagagcgtgg
      661 acagccgcac attctggtcc tcaggcagca ccagccccgg aatcagcaca tttgtcaggc
      721 tcgtgcgact gaagttgtag cgcaggtaca ccgatttggt cttcttcgca tccagatagc
      781 gctcaaactg caagcctgcc tggccaatgc gcgaagtaaa aatcgggttc tggcttgagc
      841 gatcaatgga cgcagaaagc gtggaactcc aaacgctgtt ccagaaggtg ggatttgccc
      901 atcctacggt ggcgcgctgt tccaaccgcg cgccgaatac gccggcgctg agcgtctccg
      961 cgcggccgcg gaagttgcgg cgcgtgtatt cgatcgatcc gcgtggcccc cagaacgtct
     1021 gctcacttgc cttgaagtca gtcggcagtc ctaccggcgg cagtccagga acggcaacgg
     1081 tgccacccgg gacgctccca ccccgtttgg tcacttcgaa gccgaagcca taggtaatcg
     1141 tgttgcgctt ggcttcatgc agccggatca acacctccgc ttccttctgt tcggtaatgg
     1201 gccgccgcga atccacattc gcccaatcga acgcgccgcc catggagtac atctggcctt
     1261 cgccccgcag cagcgcgctc tggctcagcg gcttgcccac tttgatattg gcgctcttca
     1321 ggatcacatc cttgttcgag tttggcgccc caaccggatc gactttggcc gtgtagacct
     1381 gcgggccttc gtcaatcatg tagaccacct ggatgtgatg gggatcgttc ttgggcgcat
     1441 ttacctgggc gcggaaaacc atcgtcagaa aaccgtggtc caggtagttc gccatgatga
     1501 ggtcgcggtc ctggtccatc agttgctgtg agtacggttt tcccggttgc aggttaagtc
     1561 cttttgggac cagcttgtat tcaggaatgg aattatttcc ttcaaccttc agcgactcca
     1621 caatatcgcg ctcgccttcg ttcaccagga acgcgacgga cagctttcca ttctgattgc
     1681 tgacctgtgg cgtcacactc accttgctgt agcccgccgc ctgatacaag ccttcaagat
     1741 ttttcacgct ggtgcggacc agcttctcgc tgtacttgcc gtgggaaaac gggatgtacc
     1801 gtctcgcctt ctctatggcc acgtggtctt tcagcttgcc gtcactgaaa tgctgattgc
     1861 ctttgaactc aaggccggtc accttgcctc gcttgccttt ggcaatgtca taacggatgg
     1921 tgtagccggt gggctgcttc tccacatggc tctgcacctt cgcgtcgaaa aagcctttgg
     1981 cttcaaagta cgactgcagg ttctgctggc cttccagcac cagatcggga tcaacgctgt
     2041 tttcctggta gatcgggatc agcttcttct gtgtccgtcc ccacacgtgc gcgccggcta
     2101 cctgtatccg gatctgcgac ctcttctcta tgtgaatgtg aatatcagcc cggttcgtgt
     2161 catcgtggta caccgtagag accagcctca cgcgcgcagc cagatagtgc tggctgccca
     2221 gccgggtttg caggaacttg attgcgttct gcagccgctt gagcgtgtac ggtttcccgg
     2281 gtttgatata cgcggcgcga atacgtgccc gcaaagatcg caggctgctc tccagttgct
     2341 tctcttcgtc cggctgcagc ccttcaatgg aaacttcgcc aaacttcgcg cgcttgcgca
     2401 gcgtactgag gaaattcacg ttcacgatcc cgtgctgctg gtcaatgtcg agttccggct
     2461 ctaccgccgc cctgaaatag cccgcctggt gatagaagct cagcaggttc gatgtggctt
     2521 catccaccct ggcgcgcgta tagggttcct gccggggata gttcgccgcc tgcagcagtc
     2581 gcgtgtaagt gaaattcgac gtccctttag gaaattgaaa gacgccgaag tagtatcctg
     2641 gctcaagcac aaacagcaca cgcaaaccgt tggcttccgg ctctacctgt gtcgtgacct
     2701 tggttacgcc attcaactgc ttgagcgctg caatcgttgc attcacttct gcctcacggt
     2761 agggagcatt gagcggctgc ttaatgagcg cttcaactga atggcgattg agatcaggtc
     2821 ggcctgccac ttcaaccgac gaaacttttt gtccttcata ggagagcgtt ggagccgttc
     2881 ccggctcctg tgaaaacatt cgcaagccgc caataacacc aacgaccacc aacaacagca
     2941 gccagctgct caccttgggt attaagatct gggaagtcag gggttggggc cgggacgtcg
     3001 tgatactcat gggcgtcgat gatctctgag cggacttgtg gtgtggcttc cgctttcctc
     3061 agcattaact aatgacgtta gagttgctcg cggaacgcta tgttgctcac gcggacagcc
     3121 ggatcaacgc ggacccgcat aagcacagca gctcgggaca gagcagctga tgcgcaataa
     3181 agatttcagg atacggctgt gtcaggagag tgttcaatcg ttgcaggaac tcggtctcac
     3241 cggcggagct gagacagagt caactcagtc ggtcacgcag gcatcctact tgcaacgctg
     3301 aatccagcgg aaggagaagt gcatgctttg gacaatcttt gcgattctgc tgatcctctg
     3361 gctgcttggc tggggatttc acatcgcagg cagtgtgatt catctgctgc tcgtgattgc
     3421 cctggtggtg ctggtcatcc agctgatcac cggacgcaga gcagtagtgt gagcccgcgc
     3481 ggtcgcctgg ccgggccgcg ctaactcttc gcttccagcc gccgtaactt ctcttccacc
     3541 tcgctcaatg cgtgccggag tgattccgag taccgctcat gggtggaact ttcgagctgg
     3601 tgccgcagat aagcctgcga cagtttcagt tgttccacct ctctccggct ttgtttttcg
     3661 ctgtcatcca ttggctgttt gcgttttgct ccgtctgtat tcgcagactc catctgcgct
     3721 tcgacagatt tgctctccca acctcttgcc atacctgaaa ttataggcac tttcaaagta
     3781 gctgcgggat tgcccatcat ggtactgttc gctgttggtc tcatcactta tgcccacaaa
     3841 accaggctgg acaggacgct tcttcgagga ctttacagtt ggcgacattt acgagcattg
     3901 gcccggcagg accgttttag ctgccgataa cgtctggttc tccctgctca cccagaacaa
     3961 caatcccatt cactttgacg ccaactactc cgccgggacc gagttcggcc ggccgctggt
     4021 ggaaggagca tttacgcttg ccctggtcac cggccaatca gttgcagacg tttccatgaa
     4081 cgcgctcgcc aatctcggat gggacgaagt gcgcacgcct aacccggttt ttgaaggcga
     4141 tacggtgtac tcgcgcagtg aggtgcttga gacacgcgaa tcgaaatccc gtccgaacgt
     4201 gggcattgtt cgtgtgaaaa cgaccggata caaacaggat ggaaaagttg tgatcgagtt
     4261 tcagcgaacc gtgatggtct tcaagcgggg acaagggcca aagcggccta cgccgcttcg
     4321 cgcgacgcgc tctgaaagct cctgatggag tgctccaggt gttcctgcaa accttcgcca
     4381 acctccatca tgtcggcgat cacgctgctc aggtccatgc ggatcaggtt gtgctgcagc
     4441 accgaggaga tcacgcgctg aagaatgcgc atttccacca ccaccagatg ggctgaatat
     4501 cccagctcag ctcgccgctg cccaaactgc tggccttgct tgataagcgt gtcaggctcg
     4561 tatccggaac tttcatccac gcggtgcgcc aattggcgca aaagcggcag aatatgccgg
     4621 gcacgctctt cccgggataa ccggaatccc tgcagctcct tttccttctg cacgtcctcc
     4681 agccattgct cggcgatgtc tgcggccgtc tcacgcagca attgagaaac ccgtttcacc
     4741 gcaagttcag gaatggccgg ccggcggtgt tgcagcctcc gctcgatcgc gcccaacaaa
     4801 gttggaacgt cggtgggctt gaggaggtaa tcgtcaacct ggttgcgaat tgcctgcaac
     4861 gcggtctcaa agtcgggata gccggtgaga ataaatgtcg cggcctcagg ctgcacgcgc
     4921 cgcattgcgc tgaccacggt aaagccatca cccggttgcc cgatgttcag gtcagagagc
     4981 agcacatcga atttgttgtg attgatctcg tgtagcgcgt cagccaccgt ggcggtgatg
     5041 gtcacttcga aaccgttcct ctccaggatc ggccccagcg tcattcggat gccggcctcg
     5101 tcgtccacga agaggatgcg cttcgccatc acgttcttag atgttgcctc ccaccctttc
     5161 agttggtaat caggtggagg tctgaaacct tagaaggctt ttggcagaac tcggcagatt
     5221 gtgaaccgtt gaaaagcaaa agccccgccg aaacggggct tgttcaccaa aatctgtgct
     5281 attcgcggtt cttgaacgaa tacccgatct gcgctccata acgttgggcg tgcccggagg
     5341 agaactcgaa gttgttgtga acgaaataaa agtgggccat tggctcgatg aaaacgctgt
     5401 tggtcacgta aattttcacc ccgccgccta catgtcccag gaaatggttg ctgctggtga
     5461 aattggtgca accgctaaac gcaccgcacg taaaaaacgg ctcataaaag cggatgctct
     5521 caaacccgat gccgccctgc aggtcagcct gcgcgcgctt tcccatgggt ggctggtaga
     5581 ctccgttgaa ttcgtagaag atcggacgga agggctggaa tgccgtctgg tcaatattct
     5641 ggtgagcgcg ccaagccgcc gtcatgccaa caccgaagtt atgatagaac aggaagtcac
     5701 cgctgaagct catatacccg ccaccgcgca ggctcggaac ctggttcacg acatcggcat
     5761 cgggcgccat aaccgtgctt aaaccaaagg cgatatcaag ttgctgcgcg tgggctggca
     5821 ttaccgcaac cccaagaagg caaaacagcg agagtagaag cgttgttttt ctcaagataa
     5881 tctcccgaac aatctgggct gtggctggac ccctacaagc aggcccaaat cccaaaccat
     5941 ccatcctcag ccgttaaata agtaactttg cgattatgct acctgctgcg caaccatgtc
     6001 cagcaaccgg agtcaccgta cttccgcgca ccagaaaaga gtcacaaccc ggacttagta
     6061 gctgagttgc gggaattttt cagcgcggat acgcctgtta ttctggaaag tgatcattga
     6121 atgtgccgct gtactcttcg accttgatgg cgttttggtt gattccaccc ccgccgtggc
     6181 ccgcgtctgg cgtgcctggg cgctgaagcg cggactcgac ccagcatgga cggtccagca
     6241 ggcccacgga cgccgcagca ttgagacggt tcgcgcactc gcgcccgaac tggatgccga
     6301 agttgaaaac cgcaatgtgg agaagatgga aattgaagac cgtgaaggcg tagtgcagct
     6361 tcccggcgct ctgcaactga tgagcaacct gcccagcgag cgctacgcgg tggtcacttc
     6421 ggcgacccgg cctcttgctg aagcccggct gctgtacgcg ggtcttcccg tccccaaaaa
     6481 catgatcacc gccagcgacg tggtagaagg caagccctcg cctgagccct ttctgaaagg
     6541 cgcacagctt ctcggtttcg ccccaagaga ttgcctggtc tttgaagacg ctcccgcagg
     6601 catcgcggcg gcccgcgcag ccggaatgcg ggttatcgct ctacaaacta cgtaccctgc
     6661 ggacgaattg caatcagccg attttctggt tccatcactt caagcggtgc ataaccggcc
     6721 gctcgcgaac gcgctgcaac tggagatcga ataggcgtcg cgctgccccg caccgcgaat
     6781 ccgcctcacc atttacaatt tttgctgaat tcattttgta aggagcgaac ttctcatgca
     6841 gagaaatgca agtgcacact ggagcggcgg gcttaaggac ggaaagggca ccctgacctc
     6901 gcccagcggc gtcctgaaac agacgcccta ttcctttgcc acccgttttg aaacccagcc
     6961 gggaacaaat cctgaagagc tgatcgcggc ggcgcatgcc ggctgcttca gcatggccct
     7021 ttcagcacag ctcggcaacg ccggaatgac ggctcaatcc attgacacca cagccaccgt
     7081 cacgcttgag aaagtggaag gcggctttgc tgtaacctcc agccatcttc aggtaaaagt
     7141 gaaaattccc ggagccgata aagccaaatt cgatgaagca gcaaagaacg cgaaggaagg
     7201 ctgccccatc tccaagctct tgaacgccaa gatcaccatg gacgcccagc tcgaaagcta
     7261 agtccgctca gccgggcctg atgcaatgcc attgggccca tctgctgctc acctcgtact
     7321 ccggccctcg tcaaacggtt cgtcactctc ctgcaatcat ctggaattgg aggcaagcag
     7381 ctcaatgcgt aaatacatcc ccccagctct gctggcgctc gctcttcttt tgagcacagc
     7441 cccggccacc tttgcgcaat cagcacttct caaccttccg cgacaaagcc agcacgccac
     7501 agttgtgcag cgcgttggga tcacggacat caccatcaac tatcaccgcc caaccatcaa
     7561 cgggcggaaa gtatggggcg gtctggttcc ttacgggcag gtctggcgcg caggcgcgaa
     7621 cgaaaacacc accatcaagt tcactgatcc ggtcaccgtg gaaggccaaa cgctcgcggc
     7681 cggtacctac ggcttgcaca tgatccccaa cgaaaacgag tggactgtga tcttctccag
     7741 ggccgcaacc gcatggggca gcttcagcta tgaccagaag gaggatgcct tgcgggttac
     7801 cgtgaagccg cagagtgcgg agatgcacga agcggtgacc tatgacttca ctgacatcaa
     7861 gccaactgag acaaccgtga cgctattctg ggaaaaggtt gcagtaccgt tcaaggtgag
     7921 cgtcaatacc aatgaagtcg tagccgacag cctgcatcgc cagctccgag gcctgcctca
     7981 gtacacgtgg gaagcgtggg atgaagctgc ggactacctg ctcagcagca aatccgacct
     8041 tgaagaggct cttacctacg cgaacagatc gattcagaat gaagagcgct ttgagaacct
     8101 gatgagcaag tcgcagattt tagacgcgct gaaccgtccc aaagacgctg ctccggtaaa
     8161 ggaaaaagca gtgtcgctgg ccaccgcaat ccagttgcac ggttacggac gtcagctcca
     8221 gatacaaggc aagcagcagg aagctttcga tgtttttcgc accaatatca aaaagtatcc
     8281 ggatcattgg gtgtcacaca acgaagccgc gcgcatggcc tgcgcggaag gaaatttcga
     8341 taaagcggta aaggaaatga agcttgccag cgccgccgcg cctgaccaga tcaaaacgcc
     8401 attagatggt ctggttaaac ggcttgaggc caaacaggac atcaacaagt aaccatttcg
     8461 gcaacggcaa caacctgagg tgcggcgctt ggcgctgcac ctttttttat tcggctggat
     8521 tatcatggtg cccatcatgc ggctttcaat ttgggtgtgt gctcttccgc tgctgttgtg
     8581 tgcgggcgcg tcctttagtc ttcatgcgca gaacattcgt gtgcctgccg atcccggccc
     8641 catggcgaaa caggtacgct cggaattcct cttcgcctgg aacgagtaca aaaatcatgc
     8701 ggccggacac gacgaacttc ggccgatgag ccaaaaaggc cacgactggt acagccagtc
     8761 gctctatatg acgccggcag atgcgctcga cacgatgatc ttgatgggcc tgacaaagga
     8821 ggccgacgaa acccgggaga tgattgcaaa gaatctctcc ttcgacaaag acattgaagt
     8881 ccaggtcttc gaagtcacta tacgactcat gggcggcctg ctgagcgggt atcaactcac
     8941 cggcgacgag cgcctggcca cgctggcgca ggacctgggc acgcgactgc tgcctgcctt
     9001 cgaatcgcct accgggatgc cctaccggtt cgtcaatctg aaaaccggca agacgcgcga
     9061 cgccatcagc aatcccgcgg agatcggcac gctgctgctg gaattcggca cgctgagcaa
     9121 gctcacaggc aagccggttt tttatgaaaa ggcaaaacgc gctgtgagcg aactgtacgt
     9181 acgcaggacc aagcttggcc tggtaggttc aaccatcaac gttgaaaccg ggcagtgggt
     9241 ggataccacc agccacatca gcggcgggat tgattcttat tatgaatacc tgctcaaatc
     9301 ctggctgctt tttggtgaca aagactgtaa gcgcatgttt atcgcgagca tggacgccgt
     9361 gaaccactac ctggctcagg acagcaagaa gtcagggctg tggtacggac aggcggacat
     9421 gaacaccggc aagctggtca gcacgaaatt cggcgcgctg gatgcgttct tccctgccgt
     9481 gcttgcgcgg agtggcgatg tgcagcgggc tcgccggctt gaggaatcgg cttacaaaat
     9541 gtggaccacg tttggcgtgg agccggagga gatcgattat acgaacatga aagttctcga
     9601 gcccggttac atgctgcggc ctgagattat cgagtcggcg tactatcttt actttttcac
     9661 taaagacgat tcttaccagg acatggcgtc caatttcctg ctgagtctct cgcgctgctg
     9721 caagactgat aatggctata cggtcctgcg caacgttagc acgcgagaga aagccgatat
     9781 catgcccagc tacttccttg ctgagacgct gaaatatcta tatctgctgt ttgcgccgcg
     9841 cgacacggtt gatctcaaca aggtggtctt caacacggaa gcccatccgc tgcagcgcac
     9901 ctgggccgtc aaatagatca ggcgaaaaaa attgggcggc ttgcgccgcc cattaagttt
     9961 tactacccac accctgagaa aaaggaggtt gttctctgcg cgttgtctga ctacatctgt
    10021 tgccgcccga ggcttcacgc ctctggctcg ggtcttgcat cacctcaggc ccgaattccg
    10081 tctgcatata tgaaaggcac ggccagtggc ctttcatatc cggaaactac ttaaaaactc
    10141 aggtaagaag gacaccgtgc gctatcgttt acttctccta tttcgcaagc gccttttgcc
    10201 ccggaggcgt ccttcttcct gctctacttc gtttggctca ttttgctatc agcgccaagc
    10261 ccaccactta agctgacctt tagctgttta gcccggtctt ttttgtgcgc tccaactagc
    10321 gtcccgtctg ccttctcata atgcaccccg cacgccaaac cacctccacg tgtaagttgc
    10381 tgaaaatgaa gcgccattcg ctcgggacgg ttccggtccc tgtgacaagt tgtcacaggg
    10441 accaggccag cgcgtcacaa ccgaaggatt cgtgtcacag ctttgcacat cgcggtcaaa
    10501 gccttgcaca cattaccttc ggccccgtcc taaataccta agcgcgaatt cagcaactcg
    10561 tgtttaaatc ggatacaccc gctatgtcat ttctatacag tgcatcatcc tcacgcgggt
    10621 aagttgctgg atttgaacca ttccgggttg gccagctgat tgcgtcagtc gacagatggc
    10681 cctgcctcat tcgcaaggca ggacaaaaag agcatgaaat attgtttcca ggccgccgta
    10741 ttgcttctgg tgtgttcggc ttacggccaa ggtgtgcctc agggacgggt ggccccggcc
    10801 ggcgatcccg cgcagatcgt tacgcagtcc gagcagatgc tcgacgcgcg tgccccgcag
    10861 caggctctga acgtggtaca ggacgcgctg cgtcgcttcc cggacaatga agatcttgag
    10921 cttgaattgg cgcgcattta cgcctaccag aagcaggaca agctggcgat gcaggcggtg
    10981 caatcggttc tgcaaaagca tcccgatagc cgcgaaggca agctggtgct cgcgcagctt
    11041 tacgggtatc gccaggcgta ccggctttct gacgccatct accgcgacct gctcgccgcc
    11101 aatcccgctg acgagactgc cgcgctggga ctcatccaca acctggctct ccagggacat
    11161 cgcgatgaag cgcgcgctca gctggctctc gctttggcaa aaaacccgtc gagcctgctc
    11221 ctgcagcaat acagtgacgc gctgcagtcc ggctccgcag agaatccgga gcttccgcgc
    11281 cgctctttcc gcgtgcaatc cggttcgtct tacttttctg acagctccgg caaccatgcc
    11341 gttttcacct ctgaaggaat gaactttgag ttgggccgca acgtaaccac gcgcttgcgg
    11401 atggaagaga cttccctttg gaaaaacggc gtttcacctg cgcaggtgat tggcggttgg
    11461 caggagatcc gctggaaacc cagtcgcttc tttgccctgc gaacctccgg tggtggggtg
    11521 cgtttcgctg acgacagcag ccgcggcacg tattccggcg atcttgaagt cttccccttc
    11581 aaaggactca cgctctccgg cggctactcg cgctttcctt tgatccccac tttcgaagcc
    11641 gcgcaggatg accttctggc agaaggctgg cacacccgaa tcgattaccg caggtatggc
    11701 ttcaacatca ccggcagcct tttccttaac cacctcagtg acggtaatcg cggagaacgc
    11761 gagttcgccg aggccatgaa gtggttcggc cacagccgaa tttccatcgg cgccggctac
    11821 gccttccgcc atctgcacat gaaagaacag ttgaacaacg gctacttcag ccctggccag
    11881 taccacagcc atctgggggc aggcgggctg aggctcgatc tcggcaagca ttatcgcggc
    11941 gaatatatcg gctatctggg cggcgaaagg atcaatgccg gcaactacag cggcgcgggc
    12001 gaactacttt tgcgcaacga attctttgtc cgtcgctggc agtttgaagc caattattcg
    12061 cacttccaac tggtgcagag caccgcagca ttccacgcca acgaagtcag cggctcggcg
    12121 ggctaccgct tttagagacg gagagaagtc tgatgtcagc aaacatggcg aaccaaaaat
    12181 tccggatcct gttggtggac gatgatgact ccgtccggag cttccttgca tcggttctca
    12241 aggccgaagg ttatgactgc ctgagcgcga acagcatcag cgcggccgag caggtgctgc
    12301 gacaggaaac catccagctc gcctttctcg atctatacct gggcacggcc aacggcctga
    12361 acgtgctcga cctgatcaag gtgcttcagc cgcattgcgc ttgcgtgatg atgaccgcgc
    12421 aaatgagcgt ggagacggtg gcaaagtcgc tgggcgccgg cgcgctggag tacctgagca
    12481 aaccgctgct gattgatgac ctgctggcga tcgtccgcaa ggtccagaat tcgcaacagc
    12541 aggcaaaagc ggccgcggcc gtggaggatg atggccctga aacttccatc attggccgca
    12601 cgccaaaaat gctggaggtt tatcgcgcca ttgcgcgcgt ggctccggcg gatatcagcg
    12661 tcctgatcct tgggcccagc ggatccggca aagagttggt cgcgcgggcg atccatgacc
    12721 acagcccgcg ctccaaaatg ccgttcgttc ctgtgaactg cggagcgctg ccggaaaaca
    12781 tcctggaaag cgagcttttc gggcacgaaa aaggcgcttt caccggcgcc gacagtagcc
    12841 gtgcggggtt attcgaggct gccaacgccg gcacgctctt tctcgacgaa atttccgaga
    12901 ccaggcccag ttttcaggta aacctgctgc gagctgtgca ggagcagcag attcgtcgcg
    12961 tgggctcgca caaatacacg ccgatcaatg tgcgcattct tgcggccagc aatcgcgacc
    13021 ttacgaagat gatggccacg ggccagttcc gtgaagacct ttattaccgg ttgagcgtgg
    13081 tagagatcag actgcccagc ctggaagagc gccgggaaga cattccgcta ctggttcagc
    13141 atttcctgaa gcgcgcgaac gagaagaaca gacggtcggt gcagatcacc gaagctgccg
    13201 tgcaggcgct gacaaatgca gcctggccgg gaaacgtgcg tgaactggaa aacgtggtcc
    13261 agcgcctggc gatcttctgc acctcaggcg agattggaat tgctgacatc gagagcgaac
    13321 gccgcccgat agcgcatgga aacggctccg gcaatggtca ccctgagggc tcagcggtat
    13381 ccgccgggtc gctcgaggac atggagcgcg tccacatcgc ccgggtgttg caggagcacg
    13441 gaggcaacaa gtcgcgcgcg gcaaacgctc tcggaatcga acgcaagacg ctctaccaga
    13501 aagcgcggcg gctcggcatt gatcttcagg taaagaaatg aaatggctcg gcacaaaccg
    13561 gcacgtgggt cccatcagca tgtggcgctg gctacgcctg aatgctgtgc tgctggtact
    13621 ggtgttgctg gtgagcctga gcttcccggt tgccacgctg aacaagaagc tcagtgacat
    13681 gttcttcttc atgcggccgc gtcaggccga gtcgcaacat gtcgcacttg tgcttgtgga
    13741 cgacgcttcc cttgctcgtt acggccgctg gccgtggcag cgtgagcgcc tggctgaact
    13801 catcagcgca gtttccaggc agaagcccag cgcaattgga ctggacgtgc tccttccaga
    13861 agcggaagac gagcgcaatg atgcagcgct ggaaaaagcc atacgatcgg caattaatct
    13921 cgtcctggcc gcaaagattt cctcctcgcc agagggacgt atgtggattg atcctctgcc
    13981 tcggtttgcc cgcgccgcca tagcgaccgg gcatgtacag gccatggtgg atgatgacgg
    14041 cctgtgccgc agcattcctc tggaggaacc tgcggcagaa gggctccgtc cagcgttagc
    14101 gctggatatt gcgtcgcttg tgaatcctga gttcgcgaga attgcacctc atgcgcagtc
    14161 aagcagcggc gtggaaaggc ttgagtcgcg gtcgctgatc atcaacttcc gccgccagtt
    14221 cattccggcg gaaacgccca agccttttgc cgtagtctct gccggcgacc ttttggctgg
    14281 acgctcagcg cccgaactcg ccggcaaggc agttctcatt ggcttcggct cggttgagat
    14341 gagcgaccgc ctcttcacgc ccgtaagcgg ccagctcccg atgcccggcg tggagatcaa
    14401 cgcaaacgcg ctggagacgt tgctctccgg gtcgacgatt actcgtgccg gcctcgaatg
    14461 gcaattgccg cttgtactca gcgtgagtgc gctttctctg tggctggtgg tacgttatcc
    14521 gggcgcacgt tcccttttcg cgcttgcggt tctgctgctg ctgggctacg caggcacctt
    14581 cctcctgttc gagagatttc acgtccttct tctttacggc cccgtgattg tggccattgt
    14641 tctggccgcg ccgctggccc agctcgagaa cctcgtcatc atcgaccgtg aagtcacaag
    14701 ccgcttgcag caactgcatc aggcaatttc acctgccagc caatcggcca ttcagctcaa
    14761 gggcaagtcc ggccggctgc actggaagct cggcgcccta agcgaactcc aggccgaact
    14821 gacttcgctg tacaccttcc agcagaccct gctggagacc atgcgagaag gacttgcggt
    14881 ctatggtgag gacggtaggc tgcgcttcgg caacgcgccg tggaaaaact tctgcgccag
    14941 gcaaggcgcc tccccggaca ctctgcaggc catcacgcag ctcagcagcg cctggcccga
    15001 actcgccgtg gttgcacaga ccggcggcac gtgggtagaa accgaattac ccgtgggcga
    15061 agagctgtgg cacctttacg cggtgccgct gccctggacc tcttttgccc agcatggcgc
    15121 ggtaatgttg atcgctgaag acatcacggc gcggcgtcag cgcgaccagg cgcgcagtga
    15181 agcattgagc tttgtcaccc acgaattgcg caccccgttg attgccatcc agggattttc
    15241 ggagatgctt atgcgttatc caaaccagac agccagtagt gaagcgcctg ccaccatctt
    15301 ccgcgaaagc aaccggctgg tggccatgat caatacctat cttgaagttc tgcggctgga
    15361 tgccggagcg cgcccgctga agatgagccg tacgagcatt cgcgccatga ccgaacatgt
    15421 ggaaaaggtg gtacgtcctc tggcaaccgc cgcaaagatg agcgtgcgca cggaaatcga
    15481 cagcgacgat gaattcatca cctgcgacga aactttgatt gccggagcgc tgttgaattt
    15541 ggtgagcaat gccatcaagt acggagctgc gggaactgaa gtcctcatgc gcgtgactgc
    15601 aagcgaggac gaacaggaaa tggagttcga ggtgaacaac gcaggcccaa ccattcccgc
    15661 ttccgaacta aagagtttat ttgaacgttt ctaccggcca tcgcgcagcg aatccatccc
    15721 cggatggggg ctgggcctga gctttgtgcg caggatctgc cagcagcacg gcggccgggt
    15781 ggaagtaagt agtgaggaaa aaaacggaac ctcctttgta ttcacgctgc cccggggtgt
    15841 ccgggaagta agcgaggtgg ctcaatgaaa actcgaatcg cagtaacgct gttccttctt
    15901 gccttggttt gcgcaatcgc ttcggcccag gaaggagacg tgcctccggc aaaggctcct
    15961 tttgccggcg ccactgtctc tgacgtgaag ggcaaggtct caatccaact gccgggccag
    16021 atgttccacg ttgccacgcg cagtgaggtc cttcctgcgg agacggtgat caagactgaa
    16081 gccggccacc tgctgctacg tctctcagat ggcagcgaca tcctggttcg ctcgaacacc
    16141 aatctcgtgc tgaaacagcc ggaaggcggc acgctgcgct atctgcaagt gatgtttggg
    16201 cgcgtccgtg ctgaaatcca gaagcgactc ggcggcgctc ccggcttcca gattggcacg
    16261 ccgagcgcgg taatctcagt gcgcggcaca gtttttgagg tggaggtcag ccgctcggga
    16321 atgactgagg ttgacgtccg tgaaggactg gtccagcttg acgccacagg tggtggctcg
    16381 gtaatgattc gcgcgggata ctcgagccgc gtggggatga gcggcagccc ggagacaccg
    16441 cgcgcgacgc gcgacatgcg tcctgatctg gaccggcccg gccacaacga tcggcacggc
    16501 gacgaccacg atgatgacgc gatgaagaag ctgcgcgcca gcaacgacga tcaccatgac
    16561 catgacggcg gcgattcgaa tcgcgattcc ggcggtaaag gcgattcctc cggcggctca
    16621 ggttcgggtt ccggctccgg atcaggttct ggttccggcc ccggtgacag cggttcaggc
    16681 gaccactctg gcgatcacgg cagtgaccac ggcggcgatc acggcggagg cagcggcaag
    16741 cctcccgaag atcagctcat cttttaattt tctgcatctt gtttatgatc tagcggagtt
    16801 cccaatgggc tccgcttatt ttttgccatg gtatgctcca gcgctagtga ccccgctcac
    16861 atcatcaacc gcagccatca attatcgtca tggtttgggg aagcgtgaag gcgctgcgcc
    16921 tgcccggcag cccggcttcc ccagcaggac tgccatgccg aacgtgcccc attccctggg
    16981 tgtcgcatat ttttccatgg agatcgcgct ggaccccggt ctgcctacct actcgggtgg
    17041 gctcggcatt ttaggaggtg acaccctgcg ttccgccgct gacatggggc tccccatgtg
    17101 tggcgtttcc ctgttgcatc gcaaaggata ttttgaccag catcttgatt ccataggcaa
    17161 tcagaccgag acctcctcaa gctggcggcc agaagaacat ctgcaggaga tgcccggacg
    17221 cgcggcgatc gaaattgaag gggaacgcgt tctgatccgg gcatggcaat acctggtgcg
    17281 cggctgcaat ggacaaacca tcccggtgtt tctgctcgat accgccctgc cggaaaacag
    17341 tgcgtttgcg cagtcactca ctgacgagct ttacggaggc gacgaacatt accggctctg
    17401 ccaggaggta attctgggtc ttggcggcat cgcggttttg cggcaactcg gccatcaccg
    17461 cgtgcttact taccacatga atgaaggtca tgccgcactg cttgcattgg ccctgctgca
    17521 agagcacctg ggcggacggt cctgcaatga agcaacggaa gcggacata
//
LOCUS       DASQYP010000147         2197 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_111179, whole genome shotgun sequence.
ACCESSION   DASQYP010000147 DASQYP010000000
VERSION     DASQYP010000147.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 2197)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2197)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2197
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_111179"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(106..1536)
                     /locus_tag="VE783_04735"
     CDS             complement(106..1536)
                     /locus_tag="VE783_04735"
                     /EC_number="6.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012348.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004356 - glutamine synthetase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006542 - glutamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine synthetase family protein"
                     /protein_id="HYX52734.1"
                     /translation="MSNELRNFLTLSYDELEEMNLRAKDQRRNRVAAHKIQEERLKYL
                     TDEKRIKAVTVLFSDLEGRLHMLDYDKKFLIKSWDNLTFDGSSIRGFTAQRESDLRLG
                     IDWSAFYWGPSDMFGPGKVLVFGDVIDKGGEPYVGDIRGRLKKFADEMHKSEGYTLNA
                     ANEIEGFLFKGSDAERHYHETTKFEYVNTGGYYHSLPGDPLRTFIDTVAEVQRSMGFQ
                     NEKDHPEVAPSQFEINYGYGEVVAAADQIQLYKLVCRQVATRMGLTASFLPKPVVGVN
                     GSGMHTNVSISKGGKNLFWDPKGQEQLSKAGWEFVDRILTHGNDICLVLNPSVNAYRR
                     LDPHFEAPNQIKASATDRGSMIRIPIGNEKSMRVEVRSVAPDANAYMVMYSIFKTGIA
                     GTISDIKNLRQAERYLPDNIYTAIENFRSSSWTTKLFGADVKGRYADLKQASADRCPR
                     LLGTFVKAPEVQYHHDVYNQFLWNLF"
     gene            complement(1774..>2197)
                     /locus_tag="VE783_04740"
     CDS             complement(1774..>2197)
                     /locus_tag="VE783_04740"
                     /inference="COORDINATES: protein motif:HMM:NF014788.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="AIR synthase-related protein"
                     /protein_id="HYX52735.1"
                     /translation="AKAAQAAIAGKFQIHAATDITGFGLIGHAREMAQGSGVSLRIKA
                     DQVPVLPGALDCIRAKFIPGGLNANRDFAECMVSYASSVPEEIRTVLFDPQTAGGLLI
                     SVAEQDTQSLLSALQQAGVAAAEIGEVIPATKPLIQIV"
BASE COUNT          417 a          606 c          683 g          491 t
ORIGIN      
        1 gatcgggtca tcgggagatc gggtcaccgt ggcgccagct ttcactgctc ccatcacgca
       61 gtgttcgcgt gatggaagcg tgttttacga aaaggaaggc cagccctaga acaaattcca
      121 caaaaactgg ttatacacat cgtggtggta ctgcacttcc ggcgccttca caaacgtgcc
      181 cagcaggcgc gggcagcggt cggccgaggc ctgtttcagg tcggcgtagc ggcccttcac
      241 gtccgcgccg aagagtttgg tggtccagct tgagctgcgg aagttttcaa tcgccgtata
      301 gatgttatcg ggcaggtagc gttcggcctg gcgcaggttc ttgatatcgg agatggttcc
      361 cgcgatgccg gttttgaaaa tgctgtacat caccatatag gcgttggcgt ccggggccac
      421 ggagcgcact tccacgcgca tggatttttc attgccgatg gggatgcgga tcatggagcc
      481 gcggtcggtg gcggacgcct tgatctggtt gggcgcttca aagtgcgggt ccagccggcg
      541 ataggcgttc acgctggggt tcagcaccag gcagatgtca ttgccgtggg tgagaatgcg
      601 atcgacgaat tcccatccgg ctttgctgag ctgctcctgg cccttggggt cccagaacag
      661 gttcttgccg cccttgctga tggagacgtt ggtgtgcatg ccgcttccgt tcacgcccac
      721 caccggcttg ggcaggaagc tggccgtgag ccccatgcgc gtggccacct ggcggcagac
      781 gagcttgtaa agctggatct ggtcagcggc ggcaacaact tcaccgtatc cgtaattgat
      841 ttcaaactgt gagggcgcga cctccggatg gtctttttca ttctggaagc ccatcgaccg
      901 ctgcacttcc gccacggtat caatgaacgt gcgcagcggg tctccgggca gcgaatggta
      961 gtagccgccg gtgtttacgt attcgaactt ggtggtctcg tggtagtggc gctcagcgtc
     1021 agagcccttg aagaggaagc cttcaatttc attggccgcg ttgagcgtgt agccttcgct
     1081 cttgtgcatt tcgtcggcaa actttttgag gcggccgcgg atgtcgccga cgtaaggctc
     1141 gccgcccttg tcgattacgt cgccgaagac gagcaccttg ccggggccaa acatgtctga
     1201 tgggccccag tagaaggcgc tccagtcgat gccgagccgg aggtcgcttt cgcgctgggc
     1261 ggtgaagcca cgaatcgacg agccgtcaaa ggtcaggttg tcccagctct tgatgaggaa
     1321 tttcttgtcg tagtcgagca tgtgcagccg gccctcaagg tcactgaaca gcacggtcac
     1381 ggccttgatg cgcttttcgt cggtgaggta cttcaggcgc tcttcctgga tcttgtgcgc
     1441 ggcaacgcgg ttccggcgct ggtctttggc gcgcaggttc atctcttcca gttcgtcgta
     1501 tgagagggtg aggaagttac gcagttcgtt tgacatggct ctccacagaa agttttttca
     1561 ccgcaaacct gtttctggaa ttcaggggga ttgaacaatt aaggttagcg cgcggcggcg
     1621 cagcacggcc aatcaaataa ccttatgaaa catatacagg gattttatta tccgcaggat
     1681 ttccacaaag gctgcactga gatgtgggcg aaggggcgtg aggctataga tagagttgga
     1741 gcgcagccgc cctcggctgc ggagaagaac ttctcagacg atctggatca gcggcttcgt
     1801 cgcgggaata acttcgccga tctccgccgc agctacgccc gcctgttgca gagcactgag
     1861 cagcgattgc gtatcctgct ccgccacaga gatcagcaat ccgccggcgg tttgaggatc
     1921 gaagagcacc gtacggattt cttccggaac agagctcgcg tagctcacca tgcattcggc
     1981 gaaatcgcga ttggcgttga gaccgccggg aatgaacttg gcgcgaatgc aatcgagcgc
     2041 gccaggcagc actggaacct ggtcagcctt gatgcgcagg cttacgccgc tgccctgggc
     2101 catctccctc gcatggccga tcaggccgaa accggtgatg tcagttgccg catgaatctg
     2161 aaacttgccc gcgatcgccg cttgcgcagc tttggcg
//
LOCUS       DASQYP010000148         4449 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_221321, whole genome shotgun sequence.
ACCESSION   DASQYP010000148 DASQYP010000000
VERSION     DASQYP010000148.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 4449)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4449)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4449
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_221321"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1288
                     /gene="gatA"
                     /locus_tag="VE783_04745"
     CDS             <1..1288
                     /gene="gatA"
                     /locus_tag="VE783_04745"
                     /inference="COORDINATES: protein motif:HMM:TIGR00132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030956 - glutamyl-tRNA(Gln)
                     amidotransferase complex [Evidence IEA];
                     GO_function: GO:0050567 - glutaminyl-tRNA synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_process: GO:0006424 - glutamyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     subunit GatA"
                     /protein_id="HYX52736.1"
                     /translation="EDRAMEQASKIDALAARGDALPPLAGVPMGIKDVMVTRGIRTTA
                     GSKILESFVPPYTCTAVERLETAGAIILGKLNCDEFAMGSSNENSAYGPVRNPRDNSR
                     VPGGSSGGSAAAVAAGTALATLGSDTGGSIRQPASFCGVVGFMPTYGRVSRYGLIAFA
                     SSLDHIGPLTRTVEDAAILLRVIAGKDPMDSTSVDLPVPDYVAEMQKPVEGFRLGVPK
                     EYFSDGLDPEVRSAVESAIQKLAQQGAQIVSVSLPHTSYAIPTYYVIATAEASANLAR
                     YDGVRYGYRSKSARTLAEMYRKSRDEAFGPEVKRRIMLGTYALSSGYYDAYYLKAQKV
                     RTLLARDFQQAFAQVDALITPTAPTVAFKLAEKSDDPLAMYLADIYTVTADLAGIPGI
                     SVPCGKSKAGLPVGLQVLGRHFDEATVLRVANAVFP"
     gene            1483..2073
                     /locus_tag="VE783_04750"
     CDS             1483..2073
                     /locus_tag="VE783_04750"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HYX52737.1"
                     /translation="MQVTDAAAVEQALAGNQDAFRTLVQRYARSLYHVVYRMTGNPQD
                     SEELVQETFLRAYKALDRFELRSNFYTWVYRIAVNRTLDFLDAKKARMDHKDAYQIAE
                     DPDPEDSRQIQLAAESPGPDRLVISAELKTKLTHALTLLTPAERVAFTMRHMEGRSIE
                     EICQTLNLKTNAAKHSVFRAVQKLRQQLEPYASAVK"
     gene            2070..2837
                     /locus_tag="VE783_04755"
     CDS             2070..2837
                     /locus_tag="VE783_04755"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52738.1"
                     /translation="MNHLTEEQIVLHYYGNADDEQELQTHLKACSACREELSRVRVLL
                     QQIPPIDVPEPLASFEEKTWLRVRDRLPIRRFGLRRFFFAPPKWALASLLILLVAGAF
                     LAGRFWPRHDANVATTGTPAANSQRVVLVAVGGHLQRSQMLLTEVMHADGKGTVDLSS
                     EQELARDLLDDNHLYRMSAQRAGDPQIAALLDELGRVLAEIANSPSQMTADDMKDIHQ
                     QIESEGLLFKVRVVGSDVNSRIRRQEQSPAAAVTQRL"
     gene            2843..4078
                     /locus_tag="VE783_04760"
     CDS             2843..4078
                     /locus_tag="VE783_04760"
                     /inference="COORDINATES: protein motif:HMM:NF025030.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HEAT repeat domain-containing protein"
                     /protein_id="HYX52739.1"
                     /translation="MKRIILSFLSLSTFLVCGLFSLAQSPQPASSLLDPQATAKANSR
                     EDDLYNQGTAALKDGNYDKAVRDFDEAAGLGGRRADAALYWKAYSLGKAGNNAAALQT
                     IGSLRKSYPQSRWLKDAAALEVELKGSAADPSDINDEEAKLMAINSLMNSDPERAVPL
                     LDKIMHGNYSPKLKDRALFVLSQSDSDKAQQILLSLAKASNDPVLQVRAIRYIGMNGN
                     SRNRSALKEIYNSATDASVKKAVFQGWLMSGDKEDVLAVAKAEKNPELRRDAIRHLGM
                     MGGRQELREMYKSSSDPLTREAVIHGMLMAGDSQGLVEIANSEKDPEVLSKAINTLGM
                     VGGQESLTALTNLYNTHDDVNTRKRVINALFLHGAADQMVAMAKRETNPELRKAWLQK
                     LSLMDSPAIQQYMMDILNK"
     gene            4088..>4449
                     /locus_tag="VE783_04765"
     CDS             4088..>4449
                     /locus_tag="VE783_04765"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52740.1"
                     /translation="MNLASKHIALISALVLLVGAANAQKPNITNAKLQELSAGGGLKP
                     TIAEITAKATGPLWIGYRIPAKAKERTMCCWDSGRNETGDGKCCLGCRMDSEHGGSFS
                     GTDSNCAPVELVPYAFLFL"
BASE COUNT          986 a         1336 c         1241 g          886 t
ORIGIN      
        1 cgaagaccgc gccatggagc aagccagcaa gattgacgcg cttgccgcac gtggtgatgc
       61 gctcccgccg ctcgccgggg tgcccatggg catcaaggac gtaatggtca ctcgcggtat
      121 tcgcaccacc gcgggatcga agattctgga aagcttcgtt ccgccctaca cgtgcacagc
      181 ggttgagcgg ttggaaactg ccggagcaat cattttgggc aagctgaatt gtgacgagtt
      241 tgccatgggc tcttccaacg agaactctgc ctatggcccg gttcgcaatc cgcgcgacaa
      301 ctcgcgtgtt cccggaggat caagtggcgg ctcagcagcg gcagtcgcgg ccggaacggc
      361 gctggccacg ctcggctcgg atactggagg ctcgattcgc cagccggctt cgttctgcgg
      421 tgtggtaggg ttcatgccga cttatggtcg cgtctcgcgc tacgggctga tcgcgtttgc
      481 ctcgtcgctc gatcacatcg gccccctcac gcgaactgta gaagacgctg ccattctgct
      541 ccgcgtaatc gctggcaagg acccaatgga ttccacttct gttgacctgc ctgtacctga
      601 ttacgtcgcc gagatgcaga aaccggtcga gggctttcgg ctcggagttc caaaagaata
      661 ctttagcgat ggtttggatc cggaagtgcg ctccgccgtc gaatccgcga ttcaaaagct
      721 ggcacaacaa ggtgcgcaaa tcgtctctgt ttccctgcca cacacctcgt atgccatacc
      781 aacttattac gtgatcgcga cagctgaggc ttccgccaat cttgcgcgct atgacggcgt
      841 gcgctacggt taccggagca aaagcgcgcg cacccttgct gagatgtacc gcaagagccg
      901 cgatgaagct tttggcccgg aagtcaagcg tcgcatcatg ctcggcacct atgcgctaag
      961 ctccggctac tacgacgcct attatttgaa agcacaaaaa gtccgcactc tgctcgcacg
     1021 cgacttccag caggcttttg cgcaggttga cgctctgatc acccccaccg ctcccacggt
     1081 ggccttcaaa ctcgcagaaa agagtgacga tccactcgcc atgtacctgg ccgatatcta
     1141 caccgtcaca gccgacctcg ccggaattcc ggggatcagc gtcccctgcg gtaagagcaa
     1201 agcaggcttg ccggtcggct tgcaggttct gggcaggcac ttcgatgagg caactgtgct
     1261 gagagtggca aacgcggtct ttccgtagtc ccgagcgcct ttggcctggg ccccctatga
     1321 gctccgaagc tcaagagtgc ttacgttcga gcctggggta gctttcaatt tcccatccca
     1381 atcccatgac ggttacagca tcctggcggt agggttccct cgctttgctc gggataaagc
     1441 aaaacctaac cgccctctta ttttccggtc taacttattc gaatgcaggt aaccgatgca
     1501 gccgcagtag agcaggcgct agccggcaac caggacgcct tccgcaccct ggtgcagcgt
     1561 tatgcacgca gcctctacca cgtggtgtat cggatgaccg gcaacccgca ggacagcgaa
     1621 gaactggtcc aggagacctt cctgcgcgca tacaaggcgc tggatcgatt tgagctcagg
     1681 tcgaatttct atacctgggt ctatcgaatc gcggtgaacc gcacgctgga ttttctggac
     1741 gcgaagaagg cacgcatgga ccacaaagac gcttatcaga tcgccgaaga tcctgacccg
     1801 gaagattcgc gacagatcca actggcggcc gagtctcctg gaccggaccg tctggtaatc
     1861 agcgcagagc tcaagacaaa gctgacgcac gcgctgacct tgcttactcc tgccgagcga
     1921 gtggcattca ccatgcgaca catggaaggc cgctcgatcg aagaaatctg ccagaccctg
     1981 aacttgaaaa ccaacgcagc caagcacagc gtttttcgcg cggtgcagaa gctgcgccag
     2041 caacttgaac cttatgcgag tgccgtgaaa tgaaccacct gaccgaagaa cagatcgtgc
     2101 tgcactatta cggcaatgcc gatgacgagc aggaattgca gacgcatctg aaagcttgct
     2161 cagcctgccg cgaagaactc tcccgcgtgc gcgtgctgct gcaacaaatc ccaccgatcg
     2221 atgttccgga gcctctcgcc agcttcgaag agaagacctg gctgcgggtc cgtgatcgtc
     2281 tgcccatccg ccgctttggc ctgcggcgat tctttttcgc tccaccaaaa tgggctctcg
     2341 ccagcctttt gattttgttg gttgcagggg ctttcctcgc cggtcgtttc tggccacggc
     2401 acgatgccaa cgtcgcaaca accggcactc ctgccgccaa ctcccagcgt gtggtccttg
     2461 tggccgttgg aggccatctc cagcgttcac agatgctgtt gacggaggtc atgcacgcgg
     2521 acggaaaagg cacggtggat ttatcgtcgg agcaggaatt ggcccgggac ctgctcgatg
     2581 acaaccatct ctatcgcatg agcgcgcagc gggcgggtga cccgcagatc gccgcactgc
     2641 ttgatgaact gggccgcgtg ctggccgaga tcgcgaactc accatcgcag atgaccgccg
     2701 atgacatgaa ggacattcat cagcagatcg agtcagaagg tctgcttttc aaagtccgcg
     2761 tggtggggtc tgatgtcaac tcccgaattc gccggcagga gcagtctccg gccgcagctg
     2821 taacccagag gctataacca tcatgaaacg tatcatactg agctttctct ctctctccac
     2881 ttttcttgtc tgtggcctct tctcgctggc gcaatcgccc caaccagcca gcagtctgtt
     2941 ggatccgcag gccaccgcca aagccaactc ccgcgaagac gacctttaca accaaggcac
     3001 ggcagcgctg aaagacggca attacgacaa ggcggtgcgc gacttcgacg aagccgccgg
     3061 cctgggcggt cgcagagccg atgcggcttt gtactggaag gcttattctc tgggcaaggc
     3121 cgggaacaat gccgctgccc tgcaaaccat tggatcactc agaaaaagct atccgcaaag
     3181 caggtggcta aaggatgctg ctgcgctcga ggtcgaactc aaagggtcag ccgccgaccc
     3241 cagcgacatc aacgatgaag aagccaagct catggcgatc aactcactga tgaattctga
     3301 tccagaacgc gcggtgccgc ttctcgataa gatcatgcac gggaattatt cgcccaaact
     3361 gaaggataga gctctgttcg tcctttcaca gagtgactct gataaggcgc agcaaatcct
     3421 gctctcgctg gcgaaggcca gcaacgatcc tgtgttacag gtacgcgcca tccgctacat
     3481 cggcatgaac ggcaacagcc gcaatcgcag cgcactgaag gaaatctaca actccgcgac
     3541 cgacgcttca gtaaaaaagg ccgtctttca gggctggctc atgtccggcg acaaggaaga
     3601 tgtgctggcg gttgcgaaag cggagaagaa cccggagctg cgcagggacg caattcgcca
     3661 tctcgggatg atgggtggcc gccaggagct gcgcgaaatg tacaagagct cctcggatcc
     3721 tctgacccgc gaagccgtaa tccacggcat gctgatggcc ggtgactcgc agggtctggt
     3781 tgaaatcgcg aactcggaaa aagaccctga agttctgagc aaagccatca atacgcttgg
     3841 catggtgggc ggccaggaaa gtcttaccgc tctgaccaac ctttacaaca ctcacgatga
     3901 cgtgaacacc aggaagcgcg taatcaacgc tctcttcctg cacggcgcag ccgaccagat
     3961 ggtggccatg gccaagaggg agaccaaccc tgaactcagg aaggcctggc tgcagaaact
     4021 ttctctgatg gattctcccg cgattcagca atacatgatg gatattctga acaaatagga
     4081 gcggattatg aacctggctt cgaaacacat tgctctgatc tccgcgttgg ttctgctggt
     4141 tggcgccgcg aacgctcaga agccgaatat cacaaacgcc aagctccagg agctttccgc
     4201 tggtggcggt ctgaaaccta cgatcgcgga gatcaccgcc aaagcaactg gccctctatg
     4261 gatcggttac cgcatcccgg ccaaagcgaa agaacgcacc atgtgctgct gggactccgg
     4321 gcgcaacgaa accggcgacg gcaaatgctg ccttggctgc cgcatggatt cagagcatgg
     4381 cggcagcttc agcggtacgg attccaattg cgcacccgtt gagctcgtac cgtatgcgtt
     4441 cctgttcct
//
LOCUS       DASQYP010000149         4513 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_153587, whole genome shotgun sequence.
ACCESSION   DASQYP010000149 DASQYP010000000
VERSION     DASQYP010000149.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 4513)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4513)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4513
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_153587"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..442
                     /locus_tag="VE783_04770"
     CDS             <1..442
                     /locus_tag="VE783_04770"
                     /inference="COORDINATES: protein motif:HMM:NF014119.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="YraN family protein"
                     /protein_id="HYX52741.1"
                     /translation="SAEITRFTLRMLDRAARLLPGKAGSPAHLETGRRGEEEAYFYLR
                     RQRYVIIARNYRSPRSRSELDMVGWDGERLCFIEVKTRSTRAIQPAEAAVDPEKRRDL
                     SQVARDFLRRIKGDPPFRFDIVSVYYEPGKAPEITLFRNAFPLA"
     gene            479..1510
                     /gene="galT"
                     /locus_tag="VE783_04775"
     CDS             479..1510
                     /gene="galT"
                     /locus_tag="VE783_04775"
                     /EC_number="2.7.7.12"
                     /inference="COORDINATES: protein motif:HMM:TIGR00209.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008108 - UDP-glucose:hexose-1-phosphate
                     uridylyltransferase activity [Evidence IEA];
                     GO_process: GO:0006012 - galactose metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="galactose-1-phosphate uridylyltransferase"
                     /protein_id="HYX52742.1"
                     /translation="MPELRKDPITGRWVIISTDRSKRPSDFSRERADIKGDSFCPFCP
                     GHESKTPPEILAYRPASENGKRDASGWNLRVIPNKFPALGIEGDLDRQADGMFDKMNG
                     IGAHEVIIETPDHMQTLATMPVRRIEDVFWAFRDRILDLKQDRRFKYIMVFKNHGEAA
                     GASLEHAHSQLIALPILPKQVTEELDGSKRYFANKERCIFCDILRQEIESRVRVAAEN
                     QDFVTICPYAPRYPFETWIMPRRHESAFENSPSQLYENLARILKVVLNKAIRVLGNPA
                     YNFVLHTSPIQENTNDYYHWHMEIIPKLTKIAGFEWGTGFYINPTPPEEAAKFLREAK
                     VEEPEPAHK"
     gene            1580..1750
                     /locus_tag="VE783_04780"
     CDS             1580..1750
                     /locus_tag="VE783_04780"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52743.1"
                     /translation="MRNVFAALQVFAALFATLLGLAMILKSTLNGVEFVGAFLAAIGL
                     TFLILLGINLKK"
     gene            complement(1763..2338)
                     /locus_tag="VE783_04785"
     CDS             complement(1763..2338)
                     /locus_tag="VE783_04785"
                     /EC_number="2.7.8.-"
                     /inference="COORDINATES: protein motif:HMM:NF013250.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0016780 - phosphotransferase activity, for
                     other substituted phosphate groups [Evidence IEA];
                     GO_process: GO:0008654 - phospholipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-alcohol phosphatidyltransferase family
                     protein"
                     /protein_id="HYX52744.1"
                     /translation="MIRQLKSTPNLLTLMRLVFVPLIVLAVVGSHYRWALAIFVLAGI
                     SDGLDGLLARLMKQQTQLGQYLDPIADKMLLSTMFLVLSFMRYIPRSVTILVFSRDII
                     IVIVCTLLYVTGAMKSFPPSFFGKANTAAQIVTVPFVLINLIWPHVGWIEFARRHGLN
                     LVVILTIVSGVHYLWRLARELRNTGARSTPA"
     gene            complement(2335..2640)
                     /locus_tag="VE783_04790"
     CDS             complement(2335..2640)
                     /locus_tag="VE783_04790"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52745.1"
                     /translation="MEAGQLVLITLHNPREKFWGLLTALTPAGVSVRGVDLQSLEDFI
                     QLVKSGEPASASVVFFPMHRVQRVELDARSGELPSLSEQFQDKTGKKVERYFAEPLA"
     gene            complement(2796..3365)
                     /locus_tag="VE783_04795"
     CDS             complement(2796..3365)
                     /locus_tag="VE783_04795"
                     /inference="COORDINATES: protein motif:HMM:NF024895.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane beta-barrel protein"
                     /protein_id="HYX52746.1"
                     /translation="MRFRFFSIAILAFIFTVPALAQQEQPPFDVFAGYSHSSNFDTGL
                     NGWIFSGNYDFSQYLGVEGDFSGHYGSHGLGGLPILLPGVPSSVNTNMYNYNFGPRFT
                     WRSPEQPFNVFGHLLFGGGHASISAPGVASQSDSSYTWVLGGGADYNFNNNWAGRAQF
                     DYLHTNFFSNGEGHPRISFGIVYRLGGSR"
     gene            3577..>4513
                     /locus_tag="VE783_04800"
     CDS             3577..>4513
                     /locus_tag="VE783_04800"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52747.1"
                     /translation="MSSSASQTEAPALESTPLSGAVPNWNFARSAAFRFGFAYWILYS
                     FPQPLIFIPYVDKLFGWYEPVWQKLIVWTGQHVFHLAKRIEFPPTGSGDTTSQFVRNF
                     LVLVFAAVAMVVWSALDRRRGNYRQLHEWLRVYVRLVLGATLLSYGAAKVIKTQFPDP
                     GLFRLLEPYGDSSPMGLLWTFMGYSRGYNWFSGAVEMVGGALLFIPRLTALGALVSAA
                     AMTNVFILNMCYDVPVKIYSLNLLLMAVFLLLPELGRLTNVFVLNRTALPVVPPALFN
                     RSSAKLALLAFQIALLLWVTGDVIYQGWSGYKQYGD"
BASE COUNT         1002 a         1264 c         1260 g          987 t
ORIGIN      
        1 ctccgctgaa atcacccggt tcaccttgcg aatgctcgat cgcgctgcac ggcttctgcc
       61 agggaaagcc ggctcaccgg cgcatctgga aaccggccgt cgcggcgaag aggaagccta
      121 tttctatcta cggcggcaga ggtatgtaat catcgcgcga aactaccgca gcccgaggag
      181 tcgaagcgag ttggacatgg tgggctggga tggcgagagg ctgtgcttta ttgaagtgaa
      241 gacgcgaagc actcgagcta ttcagccggc ggaggcggcc gtagacccgg agaagcgccg
      301 cgacctgtcc caggtggcgc gtgacttcct gcggcgcatc aagggcgatc cgccgtttcg
      361 gtttgatatt gtcagcgttt attacgaacc cgggaaagcc ccggaaatca cgctgttccg
      421 caatgccttc ccgctggcct aagcgtctcc acagcgattc ggttgtaaga tagtagtcgt
      481 gcctgagctc cgaaaagacc ctataactgg ccgctgggtc atcatctcga ctgaccgttc
      541 caagcgtcct tcagattttt cccgcgaacg cgccgatatc aaaggcgaca gcttctgccc
      601 tttctgtccc ggccacgaaa gcaagacgcc accggaaatc cttgcctatc gcccagcgtc
      661 agaaaacggc aagcgcgacg cctcgggctg gaacctgcgg gtcatcccca ataagtttcc
      721 ggcgctcggc atcgaaggcg accttgaccg gcaggccgac ggcatgttcg acaagatgaa
      781 cggtatcggg gcccatgagg tcatcattga gacccccgat cacatgcaga ctctggccac
      841 catgccggta cgtcgcattg aagacgtctt ctgggcattc cgtgatcgca tactcgatct
      901 gaagcaggac cgccgcttta agtacatcat ggtatttaaa aaccatggcg aagctgctgg
      961 cgcctcgctg gagcacgcgc actcccaatt gattgcgttg ccgatcttac ccaagcaggt
     1021 caccgaagaa ctggatggtt caaagcgcta ctttgccaac aaggaacgct gtatcttctg
     1081 tgacatcctt cgccaggaaa tcgaatcgcg ggtccgcgtc gcggcggaaa atcaggattt
     1141 tgtgaccatc tgcccatatg cgccgcgtta cccgtttgaa acctggatta tgccccggcg
     1201 gcacgaatcg gcatttgaga actcgccttc tcagctttat gagaatctgg cgcgcatcct
     1261 gaaagttgtg ttgaacaagg caatccgggt actgggcaat cccgcctata actttgtact
     1321 gcacacctcg cccatccagg aaaataccaa cgactactac cactggcata tggagatcat
     1381 ccccaagctg acgaagattg caggatttga atggggaaca ggcttctata tcaatcccac
     1441 gccgccggaa gaagccgcca aattcctgcg tgaagccaaa gtggaagagc cggaacccgc
     1501 gcacaaatag ccagcagcag aatcaaaagg ttaagagctg cgcgattcgg ctacaatgcg
     1561 ctgtacctca ggaggttccg tgcgcaacgt tttcgcagct ctccaggtct ttgccgctct
     1621 gtttgccacc ttgctcggac tggcaatgat cctgaaatct accttgaatg gcgtggagtt
     1681 tgtgggagct tttctcgcgg ccatcgggct cacttttctc atcctgcttg gcatcaacct
     1741 caagaagtga tccgataaca agtcaggccg gcgtggaacg cgctccagtg ttcctgagct
     1801 cccttgcaag acgccacaag taatgcacgc cggagacgat cgtcaagatg accaccagat
     1861 tcagtccgtg ccgccgcgca aattcaatcc aaccaacgtg cggccagatc aaatttataa
     1921 ggacgaatgg aacggtcaca atctgagctg cggtgttcgc ttttccgaag aagcttggag
     1981 gaaagctctt cattgctcca gtcacataga gcagagtaca aacgatcaca ataatgatgt
     2041 cgcgactgaa aaccagaatc gtcacacttc ttggaatgta ccgcatgaaa gagaggacca
     2101 ggaacatggt gctgagcagc atcttgtcag cgatggggtc gagatactgc ccgagctgcg
     2161 tctgctgctt catcaggcgc gccagcaagc catccaggcc gtcactgatg cctgccagga
     2221 caaagattgc gagcgcccag cggtaatggc tgcccaccac cgcgagcacg ataagcggca
     2281 caaagaccag ccgcatcagc gtgagcaggt tgggtgtgga cttaagctgg cgaatcatgc
     2341 gagcggctcc gcgaagtagc gctcaacctt ttttcctgtc ttgtcctgaa attgttctga
     2401 cagggaaggg agctcaccgc tccgggcgtc cagctcaacg cgctgcaccc tatgcatggg
     2461 aaagaaaacc acacttgcgc tggccggttc gccagacttc accagctgaa tgaaatcctc
     2521 cagggactgc agatccaccc cgcgcacgct tacgcctgcg ggcgtgaggg cggtaagcag
     2581 gccccagaat ttctcgcgcg gattgtgcaa ggtaatcagt accaactggc cggcttccat
     2641 tgggatggca gtgtcgcccc tttggcaatg atttcagcgg aatcgcctca aaaatgcaag
     2701 caaagtagaa gctcaacgca atgcccatga acgtgccgag aattgtgaag cccgccttct
     2761 gtggcgggct tctcacgaat gaggcggctg gtgatttaac gtgatccacc aagccggtag
     2821 acgatcccga atgaaattcg gggatggcct tcaccgttac tgaagaagtt ggtgtgcagg
     2881 taatcgaact gcgcgcgtcc ggcccagttg ttgttgaagt tgtaatccgc gccgccgccc
     2941 agcacccacg tataggatga gtcgctctgg ctggcaacgc ccggagcgct gatgctggcg
     3001 tggccacctc cgaacaagag atgaccgaag acgttgaacg gctgttccgg cgagcgccag
     3061 gtaaagcgtg ggccgaaatt gtagttgtac atattggtgt taacgctgga ggggacaccg
     3121 ggaagaagaa tcggcagccc gcccaggccg tggctgccgt agtggccgct gaagtcgccc
     3181 tcaacgccaa gatactggct gaagtcgtaa ttgccggaga atatccagcc gttcaggccg
     3241 gtatcgaagt tgctggaatg cgaatagcct gcgaacacgt cgaatggcgg ctgctcttgt
     3301 tgagccaaag ccggaacggt gaagatgaaa gccaatatcg cgattgagaa aaaacgaaat
     3361 ctcatgtcac tccttgcagg aaaattgccc ttggctgcgg ctcagcctca ggttgatcgt
     3421 tcaattttta tgggacactc ctcagcttag tggcagcttc cctgttcatg gttgccccgt
     3481 ccaagtatct gttgcggtag acaaaactct gattaaaatc agaacgctca ccgcaggttg
     3541 ttctcacgga tactctggaa atttgggatc agattcatgt catcttccgc ctcgcagaca
     3601 gaagcgcccg cactcgaatc tactccttta tcgggagctg tgccgaattg gaacttcgca
     3661 cgaagcgccg catttcggtt cggatttgcc tactggattc tttacagctt tccccagccg
     3721 cttattttta ttccctacgt ggacaaactt tttggatggt atgagccggt ttggcaaaag
     3781 ctgatcgtat ggacgggcca gcacgtcttc catctggcga agaggatcga gtttcctccg
     3841 accggaagcg gcgataccac gtcacagttc gtgcggaact ttcttgtgct ggtgtttgcg
     3901 gcggttgcaa tggtggtatg gtcagcgctg gatcgccgcc gcggaaatta ccggcaactt
     3961 cacgaatggc tgcgggtcta cgtgaggctc gtgctgggag caaccttgct ctcctatggc
     4021 gccgctaagg tgatcaaaac ccagttcccc gatccgggtc ttttccgttt gctggaaccg
     4081 tacggcgaca gctctcccat gggactgtta tggactttca tgggctactc ccgcgggtac
     4141 aactggttct ctggcgcagt ggagatggtg ggaggcgcgt tgctgttcat tccgcgactc
     4201 actgcattgg gcgcgctggt ttccgcggcc gccatgacga acgtcttcat tctgaacatg
     4261 tgctatgacg tgccggtgaa gatctactca ctgaaccttc tgctcatggc cgtgttcctg
     4321 ctgttgccgg agttgggccg gctgaccaat gtctttgtgc ttaaccggac cgccctgccc
     4381 gtagtgcctc ccgcgctatt caaccggtcc tccgcaaaat tggcgctgtt ggcgtttcag
     4441 atagcgcttc tgctgtgggt gactggcgac gtgatctatc agggatggtc cgggtacaag
     4501 caatacggtg acg
//
LOCUS       DASQYP010000150         3921 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_280442, whole genome shotgun sequence.
ACCESSION   DASQYP010000150 DASQYP010000000
VERSION     DASQYP010000150.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 3921)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3921)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3921
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_280442"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..369
                     /gene="pilO"
                     /locus_tag="VE783_04805"
     CDS             <1..369
                     /gene="pilO"
                     /locus_tag="VE783_04805"
                     /inference="COORDINATES: protein motif:HMM:NF016253.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0043107 - type IV pilus-dependent motility
                     [Evidence IEA];
                     GO_process: GO:0043683 - type IV pilus assembly [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type 4a pilus biogenesis protein PilO"
                     /protein_id="HYX52748.1"
                     /translation="HDTASTSGIEIRRYSSMPVANHEFYSDVPFAIDIDGPYYSVLSF
                     FQRVSELERIVNIDNLQMSNTKNTSSAKVKGQYQWSPGETVVASCTATTFFSHEPEPT
                     PPPATAGKPGQAAPPATPAK"
     gene            407..1465
                     /locus_tag="VE783_04810"
     CDS             407..1465
                     /locus_tag="VE783_04810"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52749.1"
                     /translation="MKLIHILALATAVSLTAGAQNTGTTSGQTAGQPSPSPKAQGVPA
                     AGKASPTPAAASKSGGSSSAAKPAVSTGTVKDKSGQNTVKASPTAKTGHAAPTKAGHG
                     TTTKTGQAAPASKSAASTPAAAAKVTPAPAKNSAAPATAKKGAPAPTAAAQKSGTTVP
                     KPGPVATKTNTAAMPKATAPKAAAPKTSAPKPATATTSAAAKKVTSKTGQAMMGKPKV
                     EKPKVEAPKEAAKAPAPEKKQTRLVGAAGRRDPFVSPIRDRSNVSPTASCTSGKRCLA
                     IPELVLQGTVRDITGKMMAVVSTSNRRTYTLRENDQVFNGSVEKITSDSIIFREYVKD
                     ALGRESAKEVVKKLGPTS"
     gene            1634..>3921
                     /locus_tag="VE783_04815"
     CDS             1634..>3921
                     /locus_tag="VE783_04815"
                     /inference="COORDINATES: protein motif:HMM:NF023169.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMIN domain-containing protein"
                     /protein_id="HYX52750.1"
                     /translation="MRLKQLLGTILLGMSAVSMAVASDSQLSGVLVKSHDNAGVVTIL
                     ASGTFTHTEYRPTDTVMLVDLAGVSLPQQDAKLHSVYAPGVRSYRIQSYRSPSGSDVA
                     RIELNLMPGARAQVSDVTGGLQIEVSGASAVPSPKEIAALADRRMNAASAGTSSVVAS
                     SAIAHISNVAVTHSADGVNIEIAGSGPMTAKTMKLTGPDRLVVDIPNSVLVGHNRAIN
                     VNNGEVKTVRAAHYQDDPPATRVVVDLAAMRDFEVAPAGNKLIVKLHDSARLTRPATQ
                     PSVMDAATKAPAAVTTTIATASQPRAAAPIATNEAKSAEPKPERKAEASSNPPAQNFV
                     VVSPTFSAASDHPAGTDNATPNAKVVEASASRAEVAASRFAQPTTTVASNNQPPFGSA
                     SLSAKPAAINAALQAQQAAPQQIIQSGPAVGNCTSGRYNGEPIGMNFKDLDLKDFFRV
                     IHEISGLNVVLDPAVKGSVTIVLDDVPWDQALAIVLNNNGLECQLQGNVLRIATLETL
                     KTEAEARRAQQEAQALAVPKQTITRYMSYGQSKDAVLIIKKFLSPRGDVVADPRSNAL
                     IIEDIPAALEKIDPLLRTLDRKTPEVEIEARVVAATRSFARDIGTQLGFGFADGHTAV
                     GGATQDGPIKVTNTSGDGPFRFIQGTTAGTIPLFSNLPATSPTSGVQVSTTTFGFRLD
                     YILTMAESRGLLKILSRPHIVTQNNILALIKQGTRVPVVTNQQLGGPPTVTYIDAFLR
                     LSVTPQITAENTIFLNVDVENTV"
BASE COUNT          854 a         1288 c         1112 g          667 t
ORIGIN      
        1 cacgataccg cttccacctc cggcatcgag atccgccgtt acagctccat gcctgtggcc
       61 aatcacgagt tttacagcga cgtgccgttc gccatcgaca tcgacggtcc ttattactcg
      121 gtgctgagct tcttccagcg cgtttctgag ctggaacgga tcgtcaacat cgacaatctg
      181 cagatgtcga acacgaagaa tacgagttct gcaaaggtga agggtcagta ccagtggtcg
      241 cctggcgaga ccgtggttgc gagctgcacc gcgaccacat tcttcagcca tgagccggaa
      301 ccgacgccgc cgcccgcaac ggccggtaag ccaggacagg cagcaccgcc agcaacaccg
      361 gcgaagtaag acgaacagca cgcgcgttag cacaggggaa cttaagatga agctgattca
      421 cattctggca cttgcaaccg ccgtaagtct cacggctggt gcgcagaata ccggcaccac
      481 gtcggggcaa actgctggcc agccatcgcc ttcgcccaag gcgcagggtg tgccggcagc
      541 ggggaaggct tcgccgactc ctgcagccgc gagcaagagc ggcggttcca gcagcgcggc
      601 aaagccggct gtctctacag gaacggttaa ggacaagagc ggccagaaca ctgtgaaagc
      661 ttcgcccacc gccaagacgg gccacgctgc gccaaccaag gcgggccacg gtacaacaac
      721 gaagaccggc caggcagctc cggcttccaa atctgcggcg agtacacctg cggctgctgc
      781 caaagtgaca ccggctccag ccaagaattc tgctgctcca gccacggcaa agaaaggcgc
      841 gcctgctcct acagctgccg cacagaaatc cggcacaact gtaccaaagc ccggccccgt
      901 tgcgacaaag acaaatacag ccgcaatgcc gaaggccact gctcccaagg ccgctgctcc
      961 aaagacctcg gctcccaagc ccgctacggc aaccaccagc gcggcggcga agaaggtaac
     1021 cagcaagacc ggccaggcca tgatgggcaa gccgaaagtt gagaaaccga aagttgaggc
     1081 gccgaaagag gcggccaaag ctcctgctcc tgaaaagaag cagacgcgtc tggttggcgc
     1141 tgcgggtcgc cgtgatccct tcgtaagccc gattcgcgat cgcagcaacg tctcgcccac
     1201 tgcaagctgc accagcggca agcgctgtct tgccatccct gagctggtgt tgcaaggcac
     1261 ggtccgagac atcactggca agatgatggc ggttgtttcc accagcaatc gccgcactta
     1321 taccctgcgc gagaacgacc aggtcttcaa cggcagcgtg gagaagatca ccagcgattc
     1381 gatcatcttc cgcgaatacg tgaaagacgc tcttggccgt gaaagcgcca aagaagtggt
     1441 aaagaagctc ggcccgacgt cgtaaatgag gctgcgcata gaaatagttg tttaggaacc
     1501 cctgaaagtt ttgtcgagca agaagtacgg tcattatcaa gactgatttt tctgcggctg
     1561 cgccggaggc tatctcccgg agccgcgcac gtgctgcgga gcctctggcc cgcagcgtgg
     1621 ggagacaaag caaatgaggc tgaaacaact gctgggaacc attttgttgg gcatgagcgc
     1681 cgtctccatg gcggtggcgt ctgactcgca gctttcgggc gttctggtga aaagccacga
     1741 taacgcaggc gtggtgacca ttctcgcgag cggaaccttt actcataccg aataccgtcc
     1801 tactgacacc gtgatgctgg ttgacctggc aggcgtatcg cttccccaac aggacgcgaa
     1861 gctccactcg gtctatgcgc ccggcgtccg ctcctaccgg atccagagct atcgctctcc
     1921 ttccggcagt gacgtggcgc gaatcgagct caacctgatg cccggcgccc gggcccaggt
     1981 gagcgacgtg accggcggcc ttcagattga ggtcagcgga gcgtccgccg tgccttctcc
     2041 caaagagatt gccgcgctgg cggatcgccg catgaacgct gcatctgctg gcacatcttc
     2101 ggtcgtcgcg tcttcggcca tcgcgcacat cagcaatgtt gcggtaacgc acagcgctga
     2161 cggcgtgaat atcgagatcg ccggctccgg tcccatgacc gccaagacca tgaagctgac
     2221 cggaccggac cgcctcgtcg tcgacatccc gaactcggtg ctggtcggcc ataatcgcgc
     2281 catcaacgtt aacaatggcg aagtgaagac ggtgcgcgcc gcccactacc aggatgaccc
     2341 gccggccacc cgcgtcgttg ttgatctggc cgccatgcgt gatttcgaag tcgcgcccgc
     2401 gggcaacaag ctcatcgtga agctgcacga ctcagcccgg ctcacccggc cggctacgca
     2461 gcccagtgtg atggacgctg ccaccaaggc tcctgctgct gttaccacca ccatcgccac
     2521 agccagtcag cccagggccg ccgcgcctat tgccacgaac gaagcgaaaa gcgccgagcc
     2581 caagcctgaa cgcaaggctg aggcctccag caatcctccg gcgcagaact tcgtggttgt
     2641 aagtcccacg ttcagcgctg cctctgatca cccggctggc actgacaacg ccaccccgaa
     2701 cgccaaagtg gttgaagctt cggcttcacg cgctgaagta gcggcgtcgc gtttcgccca
     2761 gcccacgacc acagtcgcca gcaacaatca accgcctttc ggcagcgcca gcctttcggc
     2821 caagccggca gccatcaacg ctgctttgca ggcccagcag gccgcgccgc agcagatcat
     2881 ccagagtggc ccagccgtgg gcaactgcac cagcggacgc tacaacggcg aacccatcgg
     2941 catgaacttc aaagacctgg acctcaagga cttcttccgg gtgatccacg agatcagcgg
     3001 actcaacgtc gtgcttgatc cggccgtgaa gggcagcgtc accatcgtgc ttgacgacgt
     3061 gccgtgggac caggcgcttg ccatcgtgct caacaacaac gggcttgagt gtcagctcca
     3121 gggcaacgtt ctgcgcattg ccacgctgga aacgctcaag acggaagcgg aagcgcgccg
     3181 cgcgcagcag gaagcccagg cgctggccgt ccccaagcag accatcactc gttacatgag
     3241 ctatggccag tccaaagacg cggtgctgat catcaagaaa ttcctctctc cgcgcggtga
     3301 tgtcgtcgcc gatccgcgca gcaacgcgct gatcatcgaa gatattcccg cggcgctcga
     3361 gaagattgat cctcttctgc gcacgcttga ccgcaaaacg ccggaagtgg agattgaagc
     3421 ccgcgtggtg gctgccaccc gcagcttcgc ccgcgatatc ggtacgcagc ttggcttcgg
     3481 ctttgctgac ggccatactg ccgtaggcgg cgccacccag gacggtccga tcaaagtcac
     3541 caatacctcc ggcgacggcc cgttccgttt catccagggc accacggcag gaacgattcc
     3601 gctgtttagc aacctgccgg ctacttctcc caccagcggt gttcaggtca gcaccaccac
     3661 ttttgggttc cgtctggatt acatccttac catggccgag agccgcggat tgctcaagat
     3721 tctttcgcgt ccgcacatcg tcacgcagaa caacatcctg gcgctgatca agcagggtac
     3781 gcgcgtgcct gtggtcacca accaacagct cggcggcccg cccacggtta cttacattga
     3841 cgcctttctg cggctcagcg tcactccgca gatcacggcc gaaaacacca tcttcctcaa
     3901 cgtggacgtg gaaaacaccg t
//
LOCUS       DASQYP010000151         4675 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_90338, whole genome shotgun sequence.
ACCESSION   DASQYP010000151 DASQYP010000000
VERSION     DASQYP010000151.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 4675)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4675)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4675
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_90338"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            274..2310
                     /locus_tag="VE783_04820"
     CDS             274..2310
                     /locus_tag="VE783_04820"
                     /inference="COORDINATES: protein motif:HMM:NF024583.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD domain-containing phosphohydrolase"
                     /protein_id="HYX52751.1"
                     /translation="MNLALFPNRRHVPGSRMLPVLVFFEQDSLGERYFLEVQRFRRTL
                     FHELKDQPTEVDRIVLVSNEDLVERHYAELRLPNTRVIALTGQRFKDPRNDGAIYAYL
                     PTGVPETLLERVVDNALDHIHLVHTRHEVNQRLAGASQEIHELNQIGVALSSERNPER
                     LLELILTKSREFTSSDAGSIYLVEAGDKLVRQSLLFIDAMAAPPPEAAVQQNLRFKLA
                     QNDSVAISFREQKMEVNEHSIAGYVALTGEIVNIADAYRLPPDVPYTINRKFDEDSGY
                     RTRSILAVPIRNQKDQIIGVLQLINAKRDHEAKLNSRAAVDEQVIPFTPRQQEIVLSL
                     ASQAAVAYENSRLYDDIQRLFEGFVHASVSAIETRDPATFGHSFRVANLTLALAEAVD
                     KISTGPYAPVRFTRDQMREIRYASLLHDFGKVSVREEVLVKAKKLYPAQMELIRERFA
                     FVRRTMENNTLQIKLQYLLENGREKFNQAEQRFDAELAERLKEMNGHLAAIVCSNEPT
                     VLPEGDFSVLSRIAALTYTGLEGTTKPLITPEEVSLLSIRQGSLDEDERLQIESHVAH
                     TVSFLEQIPWTTELRSIPEIARAHHEKLNGTGYPHRLSAPEIPIQARMMTISDIFDAL
                     AAADRPYKKAVSVERALEILDLSVKDGELDPALFGIFKEARIYDHWRVEAHPAY"
     gene            2376..2834
                     /locus_tag="VE783_04825"
     CDS             2376..2834
                     /locus_tag="VE783_04825"
                     /EC_number="3.1.3.16"
                     /EC_number="3.1.3.48"
                     /inference="COORDINATES: protein motif:HMM:NF012982.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004721 - phosphoprotein phosphatase
                     activity [Evidence IEA];
                     GO_function: GO:0004722 - protein serine/threonine
                     phosphatase activity [Evidence IEA];
                     GO_function: GO:0004725 - protein tyrosine phosphatase
                     activity [Evidence IEA];
                     GO_process: GO:0006470 - protein dephosphorylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dual specificity protein phosphatase"
                     /protein_id="HYX52752.1"
                     /translation="MTWITDRIAVGGGIWNDENMAELVRLGVTHIINMQIEFDDRPLA
                     EGYPVTVLHNPTDDDFQPKPPWLFQNGVDFALEALEEAESKIYIHCAAGVHRAPTMTL
                     AVLRVLGWDLQKAKADVQAKRYVVDWADVYVESVEEFVKVYEAAKANSKA"
     gene            2910..3590
                     /locus_tag="VE783_04830"
     CDS             2910..3590
                     /locus_tag="VE783_04830"
                     /inference="COORDINATES: protein motif:HMM:NF015423.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="trimeric intracellular cation channel family
                     protein"
                     /protein_id="HYX52753.1"
                     /translation="MPVKLPPLHIDELFFIIDFLGVFVGAVGGALAAVRETRYRYDLV
                     GVMGLSLASALGGGITRDLIIQIGPPLAFQDSRYLITALVGGVVGMVFASRIGKNAER
                     AIVVIDAAGLGLFAVAGCTRALNADLSRLPALLLGCITAVGGGCLRDVLSGRAPKIFE
                     RGELYAIAAGFAASMFLLCDYFGLSRETSTIVGGVSGFGLRLLALRFHWQTRPVRSES
                     SPAGGTSS"
     gene            complement(3610..4149)
                     /locus_tag="VE783_04835"
     CDS             complement(3610..4149)
                     /locus_tag="VE783_04835"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012792.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HYX52754.1"
                     /translation="MPAQFKIRLATPEDIPQLKALIEDSVRGLQARDYSPTQLESALE
                     TVYGVDTQLIADGTYFAVESAGTIVGCGGWSKRKTLFGGDVWPGREDTLLNPASDAAK
                     IRAFFVHPDWARRGVGTIILDACEAAAKQAGFHRLEMGATLSGIPFYREKGYTAVKEL
                     SVPLKNGEELPIVQMEKAV"
     gene            complement(4196..4402)
                     /locus_tag="VE783_04840"
     CDS             complement(4196..4402)
                     /locus_tag="VE783_04840"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52755.1"
                     /translation="MPPKFPMKTCAICGEEFELKPGKPGLAIHCPDCSTEESQPGSGE
                     RTTDREQNAARREAMRNLLYRKDS"
     gene            4528..4604
                     /locus_tag="VE783_04845"
     tRNA            4528..4604
                     /locus_tag="VE783_04845"
                     /product="tRNA-Pro"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:4562..4564,aa:Pro,seq:ggg)
BASE COUNT          917 a         1369 c         1370 g         1019 t
ORIGIN      
        1 cggctgcgaa tttcattcgg acgcaatggc cgcgcctgct gccgcagcac cggctcgcca
       61 acctgcacaa taggaagaat caatgcgcac tcctcatgaa aagcagccat tttaatcgaa
      121 gggccactgc accacggtac atgtctccac tggcatttcg gacttaggtg acatccctta
      181 acgtgccgta tgcaaacggc gcgaactcgc ataatatctg cctaacgctg gtccgcactc
      241 tcccagaagt cagcgccaca cagtcgaccg cagatgaatc tggcactatt tccaaaccgc
      301 cgccatgttc cgggcagccg gatgttgccg gtgctcgtct tcttcgagca ggactctctc
      361 ggggaacgct acttccttga agtccagcgc ttccgccgca ccttgtttca tgagctgaaa
      421 gatcagccca cggaagttga ccgtattgtg ctggtctcaa atgaagacct ggtagagcgg
      481 cactatgccg agctgcgcct gcccaatacg cgcgtgattg ctctgaccgg gcagcgcttc
      541 aaagatccgc gcaatgacgg cgctatttac gcctatctgc ctaccggcgt tcctgaaacc
      601 ttgctggagc gtgtggttga taatgcgctt gatcatatcc acctggtgca tacacggcat
      661 gaggtcaacc agcggctggc cggagccagc caggaaatcc acgagctgaa ccagataggc
      721 gtggcgctct cttctgagcg caatccggaa aggctgctgg aactgatcct gaccaagtcg
      781 cgcgagttca cctcaagcga tgcgggatcg atttatctgg tggaggccgg tgacaagctg
      841 gtgcgccagt cattgctgtt catcgatgcc atggctgctc cgccgccgga agccgcggtg
      901 cagcaaaacc tgcgtttcaa actggcccag aatgacagcg ttgccatttc tttccgcgag
      961 cagaagatgg aggtgaacga gcactccata gctggttacg tggctttgac cggcgagatt
     1021 gtcaacattg ccgatgccta tcggctgccg ccggacgtgc cctacacgat caatcgcaag
     1081 tttgacgagg actccggata tcgcacgcgc tccattctgg cggtgccgat ccgaaaccag
     1141 aaagaccaga tcatcggagt tttgcagctt atcaatgcca agcgcgacca tgaggcaaaa
     1201 ctgaattcgc gcgccgcggt ggatgagcag gtgattccgt ttacgccgcg gcagcaggaa
     1261 atcgtgctct cgctggcgag ccaagccgct gtggcgtacg agaacagtcg actctacgac
     1321 gatatccagc ggctgttcga aggctttgtt cacgcttccg tcagcgcgat tgaaacccgc
     1381 gatcccgcaa cttttggcca ttccttccgc gtggcgaatc tgaccctggc gctggccgaa
     1441 gcggtagaca agatcagcac aggcccgtat gctcccgtgc gctttacccg tgaccagatg
     1501 cgcgaaatcc ggtatgccag cctgctgcac gattttggca aagtcagcgt acgcgaagaa
     1561 gtgctggtga aggccaagaa gctttatccg gcgcagatgg agctgatccg cgaacggttt
     1621 gcgtttgtcc ggcgcacgat ggagaacaac acgctccaga tcaagctgca atacctgctg
     1681 gagaacggtc gcgagaagtt caatcaggcg gagcagaggt ttgacgccga attggccgag
     1741 cgcttgaagg aaatgaacgg gcatctggcg gcgattgtct gttcgaacga gcccacggtt
     1801 ctgccggaag gcgacttcag cgtgctctcc cgtatcgcgg ccctgactta tacaggcctg
     1861 gagggaacca ccaagccgct catcacaccg gaggaagtaa gcctgctctc cattcgccag
     1921 ggctcactcg acgaggacga gaggctccag atcgaatcgc atgtggcgca tacggtgagc
     1981 ttccttgagc agattccctg gaccaccgag ctgcgcagca tcccggagat cgcccgcgca
     2041 caccacgaaa agctgaacgg caccggctat ccgcaccggc tatccgcgcc ggagatcccc
     2101 atccaggcgc gcatgatgac catttccgac atctttgacg cactcgcagc cgctgatcgt
     2161 ccctacaaga aggcagtctc cgtagaacgc gctctggaga tactggacct ttcagtcaag
     2221 gatggcgagc ttgatccggc gctgttcgga atcttcaagg aagcccgcat ctacgatcac
     2281 tggcgagtgg aagcccatcc ggcttactga gtccagtgcg caggaattcc catccgttcg
     2341 tgtattctga agcatctaac tgattttcta tggacatgac ctggattaca gaccgcatcg
     2401 cggtgggcgg cggcatctgg aatgacgaga acatggctga gcttgtccgg ctcggcgtga
     2461 cccacatcat caacatgcag attgagttcg acgaccggcc gctggccgaa ggctacccgg
     2521 ttaccgtact gcataatccg acggatgacg actttcagcc taagccgccc tggctcttcc
     2581 agaacggagt ggactttgct ctggaagcgc tggaggaagc cgagtcaaag atttacattc
     2641 actgcgcggc cggggtgcat cgcgcgccca ccatgactct ggcggtgctg cgcgtgctcg
     2701 gctgggacct gcagaaagcg aaagcagacg ttcaagcaaa aagatatgtg gtggactggg
     2761 cggacgttta cgtggagagc gttgaagaat tcgttaaggt gtatgaagcg gcgaaggcga
     2821 attcaaaagc ttagcgctcg tcaccccgcg tctattgttg cgccacctgc tccttgccgt
     2881 tgcttcccgc acagctaaaa tgaactgcca tgccggtgaa gctgccgccg ctacacattg
     2941 acgagctctt ctttatcatc gacttcctcg gagtctttgt tggcgccgtg ggaggcgcac
     3001 tcgccgcggt tcgggagacc cgctacaggt acgatttggt cggagtaatg ggcctatcgc
     3061 tcgcatcggc tctgggtggc ggcatcaccc gcgacctcat catccaaatt ggcccaccat
     3121 tggcatttca ggactcgcgt tacctgatca cggcgctggt aggcggcgtc gtggggatgg
     3181 tcttcgcttc gcgcatcgga aaaaatgccg agcgggcgat cgtggtgatc gatgccgcgg
     3241 ggcttggcct ctttgccgtt gcaggctgca cgcgcgcgct gaatgccgat ctttcacggc
     3301 tgccagccct gttgctcggc tgcatcaccg ccgtgggtgg cggctgcctt cgcgacgtgc
     3361 tcagcggacg tgctccgaag atcttcgaac gcggcgaact ctacgccatt gctgccggtt
     3421 ttgcggcctc gatgtttctg ctctgtgact atttcggtct ttcccgcgaa acctcaacca
     3481 tcgtgggggg cgtcagcggc ttcgggctgc gtctactggc cctgcgtttc cattggcaga
     3541 ctcggccggt aaggagcgaa tcgtcacctg caggtggaac ttcaagctga ccagccgccg
     3601 ctggatgctt caaactgcct tttccatttg gacgatcgga agttcttcgc cattcttcag
     3661 cggaacgctt agctccttca ctgcggtgta ccctttctcg cggtagaagg gtattccgct
     3721 gagcgtggcg cccatctcca gccgatgaaa tccggcctgt ttggccgcgg cttcgcaggc
     3781 atcgagtatg atcgtcccca cgcctcgccg cgcccagtca gggtggacaa aaaatgcccg
     3841 gattttggcc gcgtcggagg ccgggttcag gagcgtgtct tcgcgccccg gccagacgtc
     3901 gccaccaaag agagttttcc gcttgctcca gccaccgcag cctacgatgg tgcccgcgct
     3961 ctcgactgcg aagtacgtgc cgtccgcgat cagctgcgtg tccactccgt aaacggtttc
     4021 aagagcgctc tcgagttgcg ttggtgagta gtcgcgggcc tgcaggccgc gaaccgagtc
     4081 ttcgatcaag gccttgagct gagggatgtc ctcaggcgtg gcgagccgga ttttgaattg
     4141 agcaggcacc agcctgcatt atcgggcaaa gtctctggat tggcgattct tgcgcctagc
     4201 tatctttgcg gtagagcaga ttacgcatgg cctcgcggcg ggcggcattc tgttcgcgat
     4261 ccgtggtgcg ctcacccgat ccgggctggc tttcctcggt gctgcaatcg ggacaatgga
     4321 tggcaaggcc cggctttccg ggcttgagtt caaactcttc tccgcagata gcgcaggttt
     4381 tcatgggaaa tttaggaggc atggatgatt cctggatagt tgttaaggca gcattggtgc
     4441 gccgtaccta tattttagcc cgggtttgtg ctgggttata atgagggaac cccaccgctg
     4501 tcttttttga tgcagcgttc accttgtcgg gacgtggctc agcctggtag agcactcgct
     4561 tggggtgcga ggggtcggca gttcaaatct gcccgtcccg accagttctt tgtgagtggt
     4621 ttccgcccgc gcctttactt cgtctttggc gggagttccc gcggatctca agttt
//
LOCUS       DASQYP010000152         6237 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_221516, whole genome shotgun sequence.
ACCESSION   DASQYP010000152 DASQYP010000000
VERSION     DASQYP010000152.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 6237)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6237)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6237
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_221516"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..791
                     /locus_tag="VE783_04850"
     CDS             <1..791
                     /locus_tag="VE783_04850"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52756.1"
                     /translation="SGIVSAIDSTNHAVTVSVAPTQSVVVKTSDKTSFLRYAPDSIRF
                     ADAEKSSFDQIQKGDQLRARGSKSADGKELTAEQVISGTFRNIAGTISSVDAAAKTIT
                     VKDILAKKSVTVKLTSESQLRKLPPQLAQRIAFFLKSPEAAQQMAASAQGGAPGASGA
                     GNPGQGSGRAGGPGGGGFGAGRPGGGPPDFQQMINRLPAVTLADLQKEEAVMIVSTSG
                     RGSEVSAITLLSGVEPILTAPNTAGAAALLNGWNLSTPGEGGPQ"
     gene            818..3715
                     /locus_tag="VE783_04855"
     CDS             818..3715
                     /locus_tag="VE783_04855"
                     /inference="COORDINATES: protein motif:HMM:NF025006.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxypeptidase regulatory-like
                     domain-containing protein"
                     /protein_id="HYX52757.1"
                     /translation="MIRWPQSLLKLSFLVAFLLIVIPSSVQAQGQPARMHGEVIDPTG
                     AVIPNADITIKNSATGQTTKAKSDGVGSYSLKDLPAGKYTVEVSEKGFSKYNKEVDLA
                     AGQDLRMNLVLQVQVDEQIVDVEGEAARVSTNPDQNASTLVISGKDLDALSDDPDELQ
                     SELQALAGPSAGPNGGQIYIDGFTGGQLPPKSSIREIRINQNPFSAQYDRMGFGRIEI
                     LTKPGTDKVHGQVLLNDNHSFLDSQNPFAALKPDFSTQMYNASIGGPISKKASYLVSM
                     ERRAINDVSVISDQLAVGAANAVPGFDCGLTLPCSVPNPHMRTNISPRVDYQLTPNNT
                     LTARYQYVHDTQDNAGVGQLVLPTYAFNSTSTEHTVQISDTQVIGARAINETRFEWQR
                     ASSNQNALNSGPAIIVQDFVTAGGNPVGISSSDSDHYELQNYTSINRGTHFMRFGGRL
                     RLTSLSNSTPQNFNGTYIFVSKDAFLAGQPSQYNVTTGQPEVSNTFVDVGLYAEDDWR
                     LRPNMTLSYGLRYETQNEINDHADWAPRIGFAWGIGGKKNAAPKTVLRTGFGIFYDRI
                     PQNVIVNTLQKNGVLQQTFSVNAQQDPALLHRSFPNPIDVKQLQAETGTTVYELSNGL
                     RTPYTVQAAASLERQVTKKATATLTYIHSRGIHQLVQINANTPLIPLDPSSRPNPALG
                     NIFQYTSDADFKQNQMIANVNVRASQKLTIFSYYSLSFANSDTGGANSVASNSQNISA
                     DYGRASFDVRSRVFFGGTFGLPKGFRVSPFLLFFSGAPFNITTGLDNNGDFVFNDRPA
                     LDAGIPGHIVVSQPGFPAFDITPSPGQPLIPINFADGPSQFTFNLRLSRTFGIGPKIE
                     TPAGNQPQGGQGDHQHGPVMRGGGGPGGGHGPGGPGGMGGGPFGGERSNQKYSLTFSA
                     NARNLFNHVNPGLPIGNLSSQLFDQSTGLAGGPFNSQSANRRIDLQVMFAF"
     gene            complement(3869..>6237)
                     /locus_tag="VE783_04860"
     CDS             complement(3869..>6237)
                     /locus_tag="VE783_04860"
                     /EC_number="2.7.7.65"
                     /inference="COORDINATES: protein motif:HMM:TIGR00254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="diguanylate cyclase"
                     /protein_id="HYX52758.1"
                     /translation="IGDIAKGIVTFKKLSKISLPTPVQTYHYANLIEKKDRREALEAF
                     ETSLAGFEKQKKNTQALAALRKIVELSPTAENHQRVGDKAALMGEGKVAAASYVQLGM
                     MKDEDSPGAGFQFYERSYNLDPVNPRAIYLYARGLFSRGHLGECIDVLTPMVTRYQSQ
                     STEEIRELYAHALMAARRPADAEPYAWELFAKNPQQLEEIASLIGVYIDVGDTQGALA
                     LARKTEGHETKAGRKREFLAAMFDMADRRVLSLGFTEYLEKLFSNAGLEHEYSRILLK
                     LFQLYYDAGEFRHAGETLDRAAELDPYEPGHGKRMDMLRGKIDQSQLSRISSRFQKVD
                     RSVEATPAPAPVASPAAAAAAAAGDDGEPVVLEDFMLQAEIYLQYGMRNRALERIERI
                     NKSFPREELKNQKLRDLYASASFTPVYTDAGPPQPKPAATAVKAVNGAEPDASLGNIA
                     RISEITRNIYRQANVKSVLFTAVNEIGRHFNASRCVAGLCTPGKPPSAALEFCAPGVK
                     QSDVMAIVKLINITQQLATDAPVAISKAKTAPELEGAREHINNLNIESLVAVPLLDAG
                     DPSGILILEQTSPREWREDELTVLKTITEQVVQAVANARLRTLMKTLAVTDEKSGLLK
                     RSSYLDVLLSEVRRSLQPQTPVSVMLMHFGKASALVKEIGEAQVESMMQQIGQTLASH
                     IRQNDVAVRYDLTTIALILADTVEKNAFLVVEKMRKVLLPVKVPGTERPPVMSVGIGE
                     AVIQEKFDAVDIVTEVINRVESALEIAKKGDGNNRVRALQPNFAANVA"
BASE COUNT         1273 a         1965 c         1720 g         1279 t
ORIGIN      
        1 ccagcggaat tgtcagtgcc attgattcca cgaatcacgc ggtgaccgtt tctgttgcac
       61 cgacgcaaag cgtcgtcgtc aagaccagcg acaaaacttc attcctgcgg tacgccccag
      121 attccatccg ttttgctgat gccgaaaaga gcagctttga tcagatacaa aaaggcgacc
      181 agctccgcgc ccgtggatca aagagcgctg acggaaaaga actcactgcc gagcaggtaa
      241 tctcaggaac gttccgcaat attgcgggga ctatcagctc ggtcgatgcg gctgcaaaga
      301 ccatcacggt gaaagacatt ctggcgaaaa agtcggtgac ggtgaaactc accagcgaat
      361 cgcagctccg caaacttcct ccgcaacttg cccagcgtat cgcgttcttt cttaagtcgc
      421 cggaagctgc gcagcagatg gccgcttccg cgcagggcgg agcaccgggc gcaagcggtg
      481 ccggaaatcc ggggcagggc agcgggcgcg ctggcggtcc cggcggcggc ggtttcggcg
      541 ctgggcggcc cggcggtggt ccgcccgact ttcagcagat gatcaatcgc ctgcctgcag
      601 tcacgctggc tgacctgcag aaggaagaag ccgtcatgat cgtttctact tccggccgcg
      661 gatctgaagt cagcgccatc acgctgctga gcggcgtgga gccgatcctt actgcaccga
      721 acaccgccgg agcagccgcg ctgctcaatg gctggaacct ttccaccccc ggagaagggg
      781 gaccgcaata atgcaacgcc gctcgtcaga ggactctatg attcgctggc cgcaatcatt
      841 acttaaactc agctttctcg tcgcatttct actgatcgtc atcccgtcct cggtgcaggc
      901 gcaggggcag cccgcgcgca tgcacggcga ggtcattgat cccaccggcg cggtgatccc
      961 taatgcggac attacgatca agaacagcgc taccggtcag accaccaagg caaagtctga
     1021 cggcgtgggc tcgtacagcc tgaaagacct cccggccgga aaatacaccg ttgaggtaag
     1081 cgaaaaaggc ttctcaaagt acaacaaaga ggttgatctc gccgcagggc aggaccttcg
     1141 catgaacctg gtgcttcagg tgcaggtgga cgagcagatt gtggacgtgg aaggcgaggc
     1201 cgcccgcgtc agcaccaatc ctgaccagaa cgccagcacg ctggtcatca gcggcaagga
     1261 cctggacgca ctatctgacg atcctgacga gttgcagtcc gagcttcagg ccctcgccgg
     1321 cccttctgct ggtccaaacg gcggacagat ttatattgat ggcttcaccg gaggccagct
     1381 tccgcccaag tcgtcgatcc gtgagatccg catcaaccag aatccgtttt ctgcccagta
     1441 tgaccgcatg ggcttcggac gaattgagat cctcaccaag cccggcacag acaaggtcca
     1501 tggccaggtg ctgttgaacg acaatcactc ctttctggac tcgcaaaatc ccttcgccgc
     1561 gctcaaacct gatttcagca cgcaaatgta caacgccagc atcggcggcc ccatcagcaa
     1621 gaaggcttcg tacctggtca gcatggagcg gcgcgccatc aatgatgtat ccgtgatctc
     1681 tgaccaactt gccgtaggcg ccgccaatgc agtgcctggc ttcgattgtg ggctcacctt
     1741 gccgtgctca gtccctaacc cgcacatgcg caccaacatc agcccgcggg tggattacca
     1801 gctcacgccc aacaacacgc tcacggcccg gtaccagtac gttcacgata cgcaggacaa
     1861 tgccggcgtc ggccagcttg tgctgcctac ctacgccttc aacagcacca gcaccgaaca
     1921 taccgtccag atcagtgaca cgcaggtgat cggcgcgcgg gccatcaacg aaacacgctt
     1981 tgagtggcag cgcgcaagca gtaaccagaa cgcgctcaac tccgggccgg caattattgt
     2041 gcaggatttt gttacggcgg gcgggaatcc ggttggaatc agcagctctg acagcgatca
     2101 ctacgagctg cagaactata cgtccatcaa tcgcggcacg cacttcatgc gctttggcgg
     2161 gcggctgcgc ctcaccagcc tctccaactc tacaccgcag aactttaacg gcacgtacat
     2221 cttcgtttca aaagacgcat tccttgccgg ccagcccagc cagtacaacg tcaccaccgg
     2281 ccagccggaa gtctcgaaca cctttgtgga cgtgggcctc tatgcggaag acgactggcg
     2341 tctccgcccg aacatgacgc taagctacgg ccttcgctat gagactcaga acgaaatcaa
     2401 tgatcatgct gactgggcgc cgcgtatcgg ctttgcctgg ggtattggcg ggaaaaagaa
     2461 cgctgcgccc aagaccgtgc tgcgcacggg gttcggcatc ttctatgatc gcattcccca
     2521 gaatgtgatt gtgaatacgc tccagaagaa cggtgttctt cagcagacct tctcggtgaa
     2581 cgctcagcag gatccagcct tgcttcacag gtctttcccg aatccaattg acgtgaaaca
     2641 gctccaggct gaaaccggaa cgactgtcta cgagctgagc aacggtctgc gcacgcccta
     2701 cacggttcaa gccgcagcgt cgctggaacg ccaggtcaca aaaaaggcca ccgcaaccct
     2761 gacctatatc cattcccgcg gcatacacca gcttgtgcag atcaacgcca acacgccgct
     2821 catccctctg gacccgtcat cgcgccccaa cccggctttg ggaaacatct tccagtacac
     2881 ttcggatgcc gatttcaagc agaaccagat gatcgccaac gtcaatgtgc gcgccagcca
     2941 gaagctgacc atcttcagct attacagcct gagctttgcc aacagcgata ccggcggcgc
     3001 caacagcgtg gccagcaact cgcagaacat cagcgctgat tatggccgcg cgtcgttcga
     3061 cgtacgcagc cgtgtattct ttggtggaac cttcggcctc cccaaaggct tccgcgtgag
     3121 cccgttcttg ctgttcttct ccggcgcgcc gttcaatatc accaccggtc tcgataacaa
     3181 cggagacttc gtgttcaacg atcgtcccgc gttggatgct gggattccgg gtcacatcgt
     3241 cgtctcgcaa cccgggttcc ccgctttcga cataacgcct tcgccgggac aaccgctgat
     3301 ccccatcaac ttcgctgacg gtccatcgca gttcaccttc aacctgcgtc tgagcaggac
     3361 ctttggcatt ggtccgaaga tcgaaactcc cgcaggcaat cagccgcagg gcggccaggg
     3421 agatcaccag catggccccg tgatgcgcgg cggtggtggg cccggcggtg gacacggccc
     3481 cggaggtccc ggcggaatgg gcgggggtcc cttcggtggt gagcgctcca accagaaata
     3541 ctcgctcacc ttcagtgcca acgcgcgcaa ccttttcaac cacgtgaatc ctggtttgcc
     3601 gattggcaat ctgtcgtcgc agctattcga ccagtcaacc ggtctggcgg gcgggccgtt
     3661 caattcacag tcggccaacc gccgaataga cttgcaggtg atgttcgcgt tctgaaagtt
     3721 atatcgaggt taggctaaca tcgtctctgc agggtgcggg ggcaacgata tgaagcgaag
     3781 gattggctac ggcgctaaga gagggggatt ccccttgtgc ttccgatgac ccgatggccg
     3841 atgatccgac tctcccgatc tccgaacctt acgccacatt cgccgcgaag ttcggctgca
     3901 gcgcgcggac tctgttgttt ccatcgccct ttttggcgat ttccagcgcg ctctccacgc
     3961 gattgatgac ctcggtcaca atgtccacgg cgtcaaactt ttcctgaatc accgcttcgc
     4021 ctataccaac actcatcacc ggaggacgtt cggttcctgg tacttttacc ggcaagagca
     4081 ctttgcgcat cttttcgacg accaggaacg cgttcttctc caccgtgtcc gccaggatga
     4141 gtgctatcgt ggtcaggtcg taacgcaccg ctacgtcgtt ctggcggatg tgcgaagcca
     4201 gtgtctgccc gatctgctgc atcatgctct caacctgtgc ttcgccgatc tccttcacca
     4261 gcgccgacgc ctttccaaaa tgcatcagca tcacggacac cggggtttgc ggttgcaatg
     4321 atcgcctgac ctcggagagc agcacatcaa gataagaaga gcgtttcagc aggccggatt
     4381 tctcgtccgt aaccgccagg gtcttcatta gcgtgcgcag gcgcgcgttg gcaactgcct
     4441 ggaccacctg ctcggtgatc gtcttgagca cggttaactc gtcttctcgc cattcccgag
     4501 gcgaggtctg ctcgagaatg aggatgccgg aaggatcgcc cgcatccagc agcggcaccg
     4561 ccaccagaga ttcaatattc aggttgttga tgtgctcccg cgcaccctcc agttccggag
     4621 cagtcttcgc cttggagatg gcgaccggcg cgtcggtggc aagctgctgc gtaatgttga
     4681 tcagcttcac gatcgccatc acatcagact gtttcacgcc cggcgcgcag aactccagcg
     4741 ctgcggaagg tggcttgccc ggcgtgcaca gcccggcaac gcagcggctg gcattgaaat
     4801 ggcgtccaat ctcgttcacc gccgtgaaca gcacgctctt cacattggct tggcgataga
     4861 tgttccgcgt gatctcgctg atgcgtgcga tatttcccag cgacgcatcc ggctcagcgc
     4921 cattcacagc cttcacggct gtagctgctg gtttcggctg tggcggcccc gcatccgtgt
     4981 aaaccggtgt gaatgaggct gaagcgtaca gatcgcgcag cttctggttc ttcagttctt
     5041 cgcgcgggaa actcttgttg atgcgctcaa tccgctccag cgcgcggttt cgcattccgt
     5101 attgcaggta gatttccgcc tggagcatga agtcttccag caccacgggc tcgccatcat
     5161 cgccagccgc tgctgccgca gccgcggcag gactcgccac aggggccgga gccggcgtag
     5221 cctctaccga acgatccacc ttttggaagc ggcttgaaat acggctaagc tgcgactggt
     5281 caatcttgcc gcgcagcata tccatccttt tgccgtgccc tggctcatag ggatcgagct
     5341 ccgcggcgcg gtccagtgtt tcgccggcat gccggaactc gcccgcatcg tagtaaagct
     5401 gaaagagctt cagcaggatg cggctgtact cgtgttcaag gcccgcgttg ctgaacagct
     5461 tctccaggta ctcggtgaag cccagcgata gcacgcgacg gtccgccata tcgaacatcg
     5521 cagccaggaa ctcgcgtttt cggcctgcct tggtttcgtg cccttccgtt ttgcgcgcca
     5581 gcgccagcgc tccctgcgta tcgccaacgt caatgtagac gccgatcagc gaagcaatct
     5641 cttcaagctg ctgcggattt ttcgcgaaga gctcccacgc gtatggctcc gcatccgcgg
     5701 gacgccgcgc cgccatcagc gcatgcgcat agagctcgcg gatttcttct gtactctggc
     5761 tctggtagcg cgtcaccatg ggcgtgagca cgtcaatgca ttcccccaga tggccacggg
     5821 agaacaagcc gcgagcatag aggtaaatcg cccgcgggtt caccggatca aggttgtaag
     5881 agcgctcata gaactggaag ccggcgccgg gtgaatcctc atccttcatc atccccagct
     5941 gcacatagct ggctgccgcc actttgcctt cccccatcag cgcggcttta tcgcccaccc
     6001 gctggtggtt ttccgccgtg ggtgagagtt caacgatttt ccgaagcgcc gccagcgcct
     6061 gcgtattctt cttctgcttc tcaaatccgg cgagtgaggt ctcgaaggct tccagggctt
     6121 cgcggcggtc ttttttctca atcaggttgg cgtagtggta ggtctggacc ggagtcggga
     6181 gtgaaatctt ggaaagcttc ttgaacgtga ctatgccctt ggcaatgtcc ccaatct
//
LOCUS       DASQYP010000153         5620 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_178662, whole genome shotgun sequence.
ACCESSION   DASQYP010000153 DASQYP010000000
VERSION     DASQYP010000153.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 5620)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5620)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5620
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_178662"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(216..401)
                     /locus_tag="VE783_04865"
     CDS             complement(216..401)
                     /locus_tag="VE783_04865"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52759.1"
                     /translation="MTMLSALSLLLAIAAGLALFIFHYFFNRFMGNDDTEYFADVMSQ
                     IRDSEAPAAKAKTASAA"
     gene            complement(858..3482)
                     /gene="ligD"
                     /locus_tag="VE783_04870"
     CDS             complement(858..3482)
                     /gene="ligD"
                     /locus_tag="VE783_04870"
                     /EC_number="6.5.1.1"
                     /inference="COORDINATES: protein motif:HMM:TIGR02776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006303 - double-strand break repair via
                     nonhomologous end joining [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA ligase D"
                     /protein_id="HYX52760.1"
                     /translation="MSLEEYRRKRVFSKTPEPPPKASAAQQNRFFIQRHSARRLHYDL
                     RLEMDGVLRSWALPQGPTLDPDIKRLAVHVEDHPLDYGNFEGTIPSGNYGAGQVTLWD
                     RGTFEWLTDKPPEAQWQGGDLKLRFHGQKIVGEFALVRTKRNKGKDWLLIKKKDFAVR
                     PGWDPESDIRSVLQTTTDVSQVEGAGKAAMPAKLEPMLATLTTTLPSGSDWLYEVKWD
                     GYRALCFLENGKVHMTSRRGNPMEGQFPEVAKAIAESVKAESAILDGEIVALDENGVP
                     SFQLMQNYTGFRRSAALKGEKPQSLNFFAFDLIYLNGYDLRKASLIDRRQLLSSIILP
                     NQVVRYSEHFAGRGQELMEAVRAKGLEGVVAKQAQSRYESRRSSCWLKVKVTCQQDFI
                     ICGFILGEREPFGSLVLGYYKDGQLTYAGNVGSGFNQQSLKLVHEKLKPLLTKKPVLT
                     DVPRETGQVTWAKPELVCVVKFSSWTADERLRAPVFQGLRSDASPQDVVRETGQDVEV
                     AAGVAGRNQKAPEAQTQNQSNAKPNAKSKAKPQALPSAAVQNKALQNQTQPAPRQPLL
                     SPDVNEISLDIGRHRLKFTNLKKVFYPADGYSKRDLINYYDAVSHLLLPHLAARPLSL
                     RRYPNGIDGESFFQKEAAASFPAWLHTELIRTDEENSTRFVVCDDLPSLLFLANLGCI
                     DQNPWMSRLGTLENPDFILIDLDPYHCAFDRIIEAAQLVRQKLDLIGLRGYPKTTGGD
                     GMHVYIPLEPHYTYAQSRSFAEILARWVIAERPELFTTPRNVAARQKGKVYFDWMQNA
                     EGKTISAPYVVRAYPGAPVATPLRWDEVQPGLKPIQFHIANVMRRFDRVGDLFSPVLT
                     QPQQMEPALEKLSKLMSG"
     gene            3562..4434
                     /locus_tag="VE783_04875"
     CDS             3562..4434
                     /locus_tag="VE783_04875"
                     /inference="COORDINATES: protein motif:HMM:TIGR02772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0045027 - DNA end binding [Evidence IEA];
                     GO_process: GO:0006303 - double-strand break repair via
                     nonhomologous end joining [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Ku protein"
                     /protein_id="HYX52761.1"
                     /translation="MASTVWKGHLTFGLLSLPVKLYSAARGESVSFNQLHKDDHSRVR
                     QVLYCGAEDKPIRRDEIVKGYEYEKDKYVVIDDEEIKKVAPKTAKTMEVLEFVKSAEV
                     DPIYFDASYYLSPDEAGEKPYALLFEALRQSGCVGVAKIAMHNREHIVILRPAKRGIM
                     LHTMYFKHEIREVDEFRTDTSMIQEKELGLAKMLIESLLAGFEPEKYKDNYRENLLKM
                     IQAKVEGKQVIETAAPTHKAPVIDILEALKMSLAEAKKPPRSVREANGESELVLTEAG
                     PAKPKKGRKVSGGD"
     gene            4468..4947
                     /locus_tag="VE783_04880"
     CDS             4468..4947
                     /locus_tag="VE783_04880"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52762.1"
                     /translation="MASAPKPVSLPRRSRLGESWVALSLALAVHIVDEALTGFLDVYN
                     PTVAALRARWSWFPMPTFQFRTWLIGLICAVIILLVLSPLFFRNVRWIRPLGYFAAFI
                     QISNALGHTLGTIMGRTVTTVHFPRPAPGFYSSPLLFICSIWLLMELARTRRLAHSG"
     gene            complement(4892..>5620)
                     /locus_tag="VE783_04885"
     CDS             complement(4892..>5620)
                     /locus_tag="VE783_04885"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HYX52763.1"
                     /translation="AKAIAIPADVSDRAAVTALTARVERELGPIELLVNNAGIGEPFG
                     PTWETDPDEWWRCQEVNVRGPMLCSHAVLREMVKRKRGRIIDIASGAGTAPIPYMSAY
                     VTSKAALIRLSEVLAEELRPHGITVFSVQPGAVRTRMVEQIFSSPRALQYFPWLEQMY
                     QSGQNVTAEPATRLILFLASGAADKLSGRFFNVAEDPEEVMSREEQILAADLFAQNAL
                     QIADSNISLSVPAAAFVPVPSTAI"
BASE COUNT         1110 a         1507 c         1821 g         1182 t
ORIGIN      
        1 gagcaaggaa ggcttctcaa acgactcgcg gtagcgggcg cggatgattc catcctgcag
       61 tcgctgggct tcttacgtgc cagaaaacat ctctggcgct caagtataga tgagccggat
      121 gccggagata acgccgtgga actcaagcgc catggtgctc gcgcgcgatg agcttgagcc
      181 tacggacgcg ctgagttgga ccgcaaagag aagatctagg cggcgctcgc ggttttggct
      241 ttggcggcgg gcgcttcgga gtcgcggatc tggctcatga cgtcggcgaa gtattcggtg
      301 tcgtcattgc ccatgaagcg gttgaagaag tagtggaaga tgaacagcgc caggccggca
      361 gcgatggcca gcagaaggga gagggccgag agcatcgtca ttgctaacac tcctatacgg
      421 caggatgggt aagtatgtac ccgcaaacct tctacattca acgctgctgg ataagtattt
      481 tggcttagca cgctgggtta aggcgaggca agagatcgcc ggaatcgccg taatcccacc
      541 ccaaaaagcc aaaagcgggc ttttcggggg ccccggtaat cgcgcggaat cgccgtaatc
      601 ggaaagcaaa acaggcttgg ccgcgaatca acgcgaaaaa gcgcgaatca ggagtcagcc
      661 acagacgagc acagacgagc gctgacaact cggtacttgg tcattggtag ttggtagtcg
      721 gtggatcacc gtgaacgccg gcaccgccgg ccatcgggaa aaaacacaca ggaccaaata
      781 ccaagtacct aataccaacc accaagtacc tgcctctgat cagtgttcat ctgtgttcat
      841 ctgtagcaag gatggtttca gccgctcatc agtttgctga gcttttccag cgcgggttcc
      901 atctgttggg gctgggtgag cacgggggag aagaggtcgc ctacgcgatc aaagcggcgc
      961 atgacgttgg cgatgtggaa ctggatgggc ttgaggccgg gctggacttc gtcccagcgg
     1021 aggggcgtgg ccacgggcgc gccgggatag gcgcggacca cgtaaggcgc ggaaatggtc
     1081 ttcccttccg cgttctgcat ccagtcaaaa taaactttgc ccttctggcg cgcggccacg
     1141 ttgcgcggcg tggtgaaaag ctccggccgc tcggcgatga cccagcgcgc caggatctcc
     1201 gcaaacgagc gcgactgcgc gtaggtgtaa tgcggctcca gcgggatata gacgtgcatg
     1261 ccgtcaccgc cggttgtttt gggatagccg cggaggccga tgaggtcgag cttttgccgg
     1321 acgagctgcg ccgcctcaat gatgcggtca aaggcgcagt ggtagggatc gaggtcgatg
     1381 aggatgaagt cgggattttc gagcgtgccg agccggctca tccacgggtt ctggtcaatg
     1441 cagcccaggt tggcgagaaa gagcagtgac gggaggtcat cacagacgac gaagcgcgtg
     1501 gagttttctt cgtcggtgcg gatgagctcg gtgtgcagcc aggctgggaa gctggcggcg
     1561 gcttccttct ggaagaagct ctcaccgtca atgccattgg gatagcggcg cagggagagc
     1621 ggccgcgcag caaggtgcgg cagcagcaga tgggagacgg cgtcgtaata gttgatgagg
     1681 tcgcgcttgc tgtaaccgtc ggcgggatag aagaccttct tcaggttggt gaacttgagg
     1741 cggtgacggc caatgtcgag cgagatttcg ttgacgtcgg gcgagagcag cggttggcgc
     1801 ggtgcgggct gggtttgatt ctgcaaggct ttattctgca cggctgccga cggcaaggct
     1861 tggggcttgg cttttgattt cgcgttcggc ttggcgttcg actggttttg cgtttgggct
     1921 tcaggggctt tttgattgcg gccggcgacg ccagcagcga cttcgacgtc ctggccggtt
     1981 tcgcggacca cgtcctgcgg tgaagcgtca ctccgcaggc cttggaagac gggcgcgcgc
     2041 aggcgttcgt cggcggtcca gctggagaac ttgaccacgc agaccagttc gggcttggcc
     2101 cacgtgacct ggccggtttc gcgaggcacg tcagtaagta cgggcttttt ggtgagcagc
     2161 ggcttcagct tttcgtgaac cagcttgagc gactgctggt tgaagcctga gcccacgttg
     2221 ccggcgtagg tgagttggcc atctttgtaa tagccgagga cgagtgagcc gaagggctcg
     2281 cgttcgccca ggatgaagcc gcagatgatg aagtcctgct ggcaggtgac tttgactttg
     2341 agccagcacg aactgcggcg cgattcatac cggctctgcg cctgcttggc cacaacgcct
     2401 tccaggccct tggcgcggac ggcctccatg agttcctggc cgcgtccggc aaagtgctct
     2461 gagtagcgca ccacctggtt gggcaggatg atggaagaaa gcaactggcg gcggtcaatg
     2521 agcgaggctt tgcggaggtc gtagccgttg aggtagatga ggtcgaaggc gaagaagttg
     2581 agcgactgcg gcttttcacc cttgagcgca gccgagcggc gaaagccggt gtagttctgc
     2641 atgagctgga agctgggcac gccgttttcg tcgagcgcga cgatttcgcc atcgaggatg
     2701 gcggattcgg cttttacgga ttcggcgatg gctttggcga cctcaggaaa ctggccttcc
     2761 atgggattgc cgcggcgcga ggtcatgtgg actttgccgt tttcgaggaa gcagagagcg
     2821 cgatagccgt cccacttaac ctcatacagc cagtcagagc cggagggcag cgtggtggtg
     2881 agcgtggcca gcatgggttc aagtttggcg ggcatggcgg ctttgccggc gccttccacc
     2941 tgcgagacgt cggtggtggt ttgcaggacg ctgcggatgt cgctttccgg gtcccagccg
     3001 ggccggacag cgaagtcttt tttcttgatc agcagccagt ctttaccctt gttgcgtttg
     3061 gtgcggacca gtgcaaattc gccgacgatt ttttgcccgt ggaagcgcag cttgaggtcg
     3121 ccgccttgcc actgggcttc aggaggtttg tcagtgagcc actcgaaggt gccgcggtcc
     3181 cagagcgtga cctgtccggc gccgtagttg ccgctgggaa tggtgccctc aaagttgccg
     3241 tagtcgagcg gatggtcttc cacgtggacg gccaggcgct tgatgtcggg gtcgagcgtg
     3301 gggccctgcg ggagggccca ggagcggagg acaccgtcca tctccagcct caagtcatag
     3361 tggaggcggc gggcgctatg tctttgaata aaaaagcggt tctgctgcgc ggcgctggct
     3421 ttgggcggcg gctcgggggt tttggagaag acccgttttc ggcggtattc ttctagtgac
     3481 atggtctaaa ggtgagattg taaatgcaca gagaactgtg ctaaacacgt agtctcgccc
     3541 ggattattgg agaagaactg aatggccagc accgtatgga aggggcacct caccttcggg
     3601 ttgctttccc tgcccgtgaa actgtacagc gccgcgcgcg gcgaatccgt gagctttaac
     3661 cagctgcata aagacgatca ttcgcgcgtg cgccaggtcc tttattgcgg cgcggaagac
     3721 aagcccatta ggcgtgacga gattgtgaag ggctacgagt atgaaaaaga taaatacgtg
     3781 gtcattgatg atgaggagat aaagaaggtc gcgcccaaga cggccaagac catggaagtg
     3841 ctggagtttg tgaagtcggc ggaggtcgac ccgatttatt ttgacgcttc ctactatctc
     3901 tcgcccgacg aagccggcga gaagccctat gccctgctct ttgaagcgct gcgccagagc
     3961 ggctgcgtgg gcgtggccaa gatcgccatg cacaaccgcg agcacattgt gattctgcgc
     4021 ccggccaagc gcggcatcat gctgcacacc atgtacttta agcatgagat ccgcgaagtg
     4081 gacgagttcc gcaccgatac cagcatgatc caggaaaaag aacttgggct ggccaagatg
     4141 ctgattgagt cgctgctggc cggctttgag ccggagaaat acaaggacaa ctatcgcgag
     4201 aacctgctca aaatgatcca ggccaaagtg gaaggcaagc aggtgatcga gaccgcagct
     4261 cccacgcaca aggcgccggt gatcgacatt cttgaagcgc tgaagatgag tttggccgaa
     4321 gcgaagaagc ctccgcggtc tgtgcgcgaa gcgaatggag agtcagagct ggtactgaca
     4381 gaagcgggac cggccaagcc gaagaagggc cgcaaagttt cgggcggcga ctgaagctgg
     4441 agttgacgcg actgagtttt gagttctatg gcgagtgcgc ccaagccggt ttctttgccg
     4501 cggcggtcgc gactgggaga gtcatgggtt gcgctcagcc tggcactggc agttcatatc
     4561 gttgatgagg cgctgaccgg ctttctagat gtttacaatc ccacagtcgc cgcgctgcgt
     4621 gcgcgatggt cgtggtttcc gatgccaact tttcagttcc gcacctggct catcgggctg
     4681 atctgcgctg tgattatctt gttggtgcta tctccgctct tctttcgcaa cgtgcgctgg
     4741 atcaggccgc tcggttactt tgcggcgttc atccagatct cgaatgcttt gggacatacg
     4801 cttggaacga tcatgggacg caccgtaact accgttcatt ttccgcgacc ggctccaggc
     4861 ttctactctt cgccgctgct ctttatttgt tctatatggc tgttgatgga actggcacga
     4921 acgcggcggc tggcacactc aggctaatgt tgctgtccgc tatttgaagc gcattctgag
     4981 cgaaaagatc ggctgccaga atctgctcct ctctgctcat cacctcttca ggatcttctg
     5041 ccacattgaa gaaccttccg ctcagcttgt cggccgcacc tgaggcgaga aacagaatca
     5101 gccgcgttgc cggctcggca gtaacgttct gtccgctctg gtacatctgc tcgagccagg
     5161 gaaaatattg cagagcgcgc gggctggaga aaatctgctc taccatccgc gtgcgcaccg
     5221 cacccggctg aacggaaaat acagttatcc cgtgtggccg cagttcttcc gccagcactt
     5281 cactcaagcg gatgagcgcc gccttgctcg tgacataagc ggacatgtat ggaatggggg
     5341 ccgttcccgc tccgctggcg atgtcgatga tgcgccctcg cttgcgtttc accatctcac
     5401 gcagcacggc gtgcgaacac agcatgggcc cgcggacgtt cacctcctgg catcgccacc
     5461 actcgtctgg atcggtctcc cacgtcggtc caaacggctc gcctatgccg gcgttgttca
     5521 ccaggagttc gattggcccg agctcgcgtt caactctggc cgtcaacgcg gtaaccgcag
     5581 ctcgatcgct cacatccgcc ggaatagcaa tcgccttagc
//
LOCUS       DASQYP010000154         6679 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_304752, whole genome shotgun sequence.
ACCESSION   DASQYP010000154 DASQYP010000000
VERSION     DASQYP010000154.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 6679)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6679)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6679
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_304752"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2080)
                     /locus_tag="VE783_04890"
     CDS             complement(<1..2080)
                     /locus_tag="VE783_04890"
                     /EC_number="2.4.1.1"
                     /inference="COORDINATES: protein motif:HMM:TIGR02093.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycogen/starch/alpha-glucan phosphorylase"
                     /protein_id="HYX52764.1"
                     /translation="MSADLLTNPGNPELLRDSILRHVRYTLARANGKPTPQELFKPLS
                     LAIRDHLIDGLIETEKRYREQDAKRLFYLSMEFLMGRWLSDNLCNLGMNDACREVLAE
                     FGVSLESVLEVEQDAGLGNGGLGRLAACFLESLATLHMAGFGYGIDYEYGLFRQEIVG
                     GHQREKPDLWKSEGTPFYIERPQELCAIPLYGRLDRSHDFPRTAPQRWVDSKIVIGVP
                     NDMPVAGLNGQTVNYLRLFTARASQDFDIEIFNRGDYIRAVEQKIASENISRVLYPSD
                     SVMSGKELRLMQEYFLVACSLRDIMRNYLATHRSFDQFPASVAIQMNDTHPSLSVAEL
                     MRLLVDDHHLEWERAWEITEATLGYTNHTLLPEALERWSVSLMEHVVPRHMEIIYEIN
                     AQFLRKVDRQWPGDLERQRRMSVIEEGPDKQVRMAHLAIVGSHAINGVSKLHSELLKD
                     QLVPDFAALWPDRFSNKTNGVAPRRWLLKANPGLSALLSRHVGEGWITDLEQVRGIEK
                     LADDSAFQAEFMAIKRRCKEKLAAEILETTGVETEPDSLFDVQVKRIHEYKRQLLNVM
                     RIIHDYLAIVEDNTLPKVPRTYVFAGKAAPGYWAAKQIIKLINNVAQVVNHDPRVSRA
                     LRVVFVPDYRVSLAEIIMPAADLSQQISTAGMEASGTGNMKLTMNGALTIATWDGANI
                     EIAEEVGKENI"
     gene            complement(2246..3652)
                     /locus_tag="VE783_04895"
     CDS             complement(2246..3652)
                     /locus_tag="VE783_04895"
                     /inference="COORDINATES: protein motif:HMM:NF013584.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidase"
                     /protein_id="HYX52765.1"
                     /translation="MLGEDILYLPVTELSRRVSTKQISPVELAESYLERSRRIGPKLN
                     AYVTLTPELALEQARAAEKEIAAGKYRGPLHGIPYAAKDLLAVKGYPTTWGARPFAKQ
                     RIEHDATVIRKLNDAGAVLIGKAAMIELAGGMGYRFASAAFTGPAKNPWNTDHWTCGS
                     SSGSGAIMAAGLAAFALGTETWGSILCPSGFCGVSGLRPAFGRVSRAGAMALAYSMDK
                     IGPMCRTAADCGLVLQTIAGHDPEDAGTMPETQARYTRPPENRTESLRLGWLTNQWKE
                     LAVDVTGPVNEARKVLESLPAMKTTEIALPDGPWEAAAGTIVSVEGASAFRDLIHSGK
                     VAELNDPAGKIGGYLNEEISASDFLLAQRVRRILQTKIDSLFQQLDVLVTATLPVTAP
                     KIDANLDLSLSFADPIGGIGNICGLPAISVPCGFGNGGLPVGLQFLARPLDDHKVVQA
                     ARRFQENTDWHLRHPKIA"
     gene            complement(3652..4038)
                     /locus_tag="VE783_04900"
     CDS             complement(3652..4038)
                     /locus_tag="VE783_04900"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52766.1"
                     /translation="MPKFSAGRRRFALGAAATAASTLIAPAEAVVHRAHVSTPTPQAA
                     GGDQSLEQRMKAAIAKLSPQAKAEVEAKFANIVRKYGSRLNDEQKLDIRRSLAETQEG
                     LEKMREFAVMNGDEPATVYQNYRGEK"
     gene            4173..4553
                     /locus_tag="VE783_04905"
     CDS             4173..4553
                     /locus_tag="VE783_04905"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52767.1"
                     /translation="MPRWLTFDSRTASRLRQQLGGEQVFEHGASDALDYALNLQTSTV
                     TVLPTEVPGQAAVVVIRPVSYQRTAAASALPSRREVRLIAPEDAGSYQAGGILGLRDE
                     RLYEDETPVEAKKKNWWQRFWDES"
     gene            complement(4550..6256)
                     /locus_tag="VE783_04910"
     CDS             complement(4550..6256)
                     /locus_tag="VE783_04910"
                     /inference="COORDINATES: protein motif:HMM:NF025006.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxypeptidase-like regulatory
                     domain-containing protein"
                     /protein_id="HYX52768.1"
                     /translation="MSRKLGCLLVFLMAGTQVYAARVGVISGYIKDSSGAPQMGAVVD
                     IFTSATTVGTTVFTDSQGHYSAENLPPGKYQIRVSAVSFLPSLRENVKLNAGAHVLVN
                     LTLNTLADALTLLPSKKTSTSEPDDWHWTLRSSANRPVLRALEEDKTPAGGMVVVSRT
                     DDQQKDLKARVAFIAGSEAEGFGGSGDMTTAFALEKSIFSSGTISLHGNIGATPGEPT
                     GVLRASYAHDFGGTSRPRFTVTYRHFATPGSTVADNSPYSALQINTSDSMTVAGFIDL
                     QYGADLQSLEFAKRVIAARPYGTVQVHLGPNTVLEYRYASSEPDSRGAKGFETAPADL
                     SESGPRMSLTNGLPDVEHARHNELSISRRAGKTSVQVALFSDRVRNLVLTGAGDPSSY
                     SDDVLPDIYSGTFSYAFANGLSSTGARVVVERKLNEALTATVDYANEDVVTAEGPTTW
                     QALAQALATSRQNAVSGKITGALPGGTRWIASYKWTSGNALSPVDAFNASPGQSDPYL
                     SIFIRQPLPSTSLIPAKMDALLDIRNLLAQGYMPVMGQDGRTLYMVQSARALRGGLAF
                     TF"
     gene            complement(6289..>6679)
                     /locus_tag="VE783_04915"
     CDS             complement(6289..>6679)
                     /locus_tag="VE783_04915"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52769.1"
                     /translation="PAREIGTGNFVIGTSRVRPRVQPSNGKPISFKREEKVNLWMQVY
                     NLGVDDKTKKPSAVVEYQVVNTANNKPVVNFTESTAQMGNVGEQITLQKTLSLAKLEP
                     GVYQVTIKVNDMVSKQTISPTAKFMVQ"
BASE COUNT         1333 a         1959 c         1950 g         1437 t
ORIGIN      
        1 agatattctc tttgccgact tcctcggcga tttcgatgtt ggcgccgtcc caagtcgcaa
       61 tcgtcaaagc gccgttcatt gtcagcttca tattgccggt gccgctggct tccatgcctg
      121 cggtggaaat ctgctggctc aggtcggccg cgggcatgat gatttcggca agggatacgc
      181 ggtagtccgg cacaaagacc acgcgcagtg cgcggctgac gcgaggatca tgattcacca
      241 cctgcgcaac attgttgatc agcttgatga tctgcttggc ggcccagtat cccggtgctg
      301 cctttcccgc gaagacataa gtgcgcggaa ctttgggcag ggtgttgtct tccacaatcg
      361 ccaggtagtc gtggatgatc cgcatcacgt tcagcagctg gcgcttgtat tcgtggatgc
      421 gctttacctg aacgtcgaag agcgaatcgg gctccgtctc cacgccggtg gtttccagga
      481 tttccgctgc aagcttttcc ttgcaacgcc gcttgatggc catgaactca gcctggaacg
      541 cggagtcgtc tgcgagtttc tcaatgccgc gtacctgctc aagatcggtg atccagcctt
      601 cacccacgtg cctgctgagc aaggcggaga ggccgggatt cgccttaagc agccagcgac
      661 gcggcgcaac cccgttggtc ttgttgctga agcggtcagg ccagagcgcg gcgaagtcgg
      721 gaacaagctg gtctttcagc agctcagaat gcagcttgga gacgccattg atggcgtggc
      781 tgcctacgat cgcaagatgc gccatgcgca cctgcttgtc cggcccttct tcgatgacgg
      841 acatgcggcg ctgccgttcc aggtcgccgg gccattgccg gtccaccttt ctcaggaact
      901 gggcattgat ctcgtagatg atttccatgt gccgcgggac cacgtgttcc atgagcgaga
      961 cggaccagcg ctccagggct tccggcagca gcgtatggtt ggtgtagccg agtgtggctt
     1021 cggtgatttc ccaggcgcgc tcccattcca gatggtgatc gtcgaccagg agccgcatca
     1081 gctcagccac ggagaggctg ggatgggtgt cattcatctg gatggccacg ctggcgggga
     1141 actgatcgaa gctgcggtgc gtcgcgaggt aattgcgcat gatgtcgcgc agcgagcagg
     1201 cgaccaggaa atattcctgc atcaggcgca attccttgcc agacatcacg gagtcagaag
     1261 ggtacaggac gcgcgaaata ttctccgacg cgatcttctg ttccaccgcc cggatgtaat
     1321 cgccgcggtt gaagatctca atgtcaaaat cctgcgacgc acgcgcagtg aacaggcgaa
     1381 gatagttcac cgtctgtccg ttgagtccgg ccaccggcat gtcattaggg acgccgatga
     1441 cgattttgga gtcaacccag cgctgcggcg cggttcgcgg aaaatcatgc gagcgatcca
     1501 gcctgccata gagcggaatg gcgcacagct cctgcggtcg ttcgatatag aacggcgtgc
     1561 cttcagattt ccagaggtcc ggcttctcac gctggtgtcc gccaacaatc tcctggcgga
     1621 agagcccgta ctcgtaatca atgccgtagc cgaatccggc catgtggagc gtagccagcg
     1681 attcaaggaa gcacgcggcc agccggccaa gaccgccatt gccgaggccg gcgtcctgct
     1741 cgacttccaa cacgctctcc agtgagactc caaattcggc gagcacctcg cggcaggcgt
     1801 cgttcatgcc aagattgcag aggttatcgc tgagccagcg gcccatgaga aattccattg
     1861 atagatagaa aaggcgcttg gcgtcctgtt cgcgatatcg cttctcggtc tcaataagtc
     1921 cgtcgatcag gtggtcgcgg atggctagcg agagcggctt gaacagctcc tgcggcgtgg
     1981 gctttccgtt ggcgcgcgcc agtgtgtaac gcacgtggcg cagaatggaa tcccgcaaca
     2041 gctcaggatt gccgggattc gttagcagat cggcagacat cgagtaaaag ctagcatctc
     2101 cacaacgcgc aggcgatgat tcacggttca ctcaaacaaa cggcacgcat cactggcatc
     2161 gtgcctgcgg tcaccctgcc attgcagcac tccgattagt atggcacatg gctctaaccg
     2221 ctgacactaa ggttaagtac ctgactcagg cgattttcgg atgccgaagg tgccagtccg
     2281 tattttcctg gaaccgtctg gcagcctgca ccaccttgtg atcgtcgaga ggacgcgcca
     2341 ggaactgcag ccccaccggc aagccgccgt tgccgaagcc gcaaggaacg ctgattgccg
     2401 gcagcccgca aatatttccg atgccgccaa tcgggtccgc gaagctcaaa ctaaggtcaa
     2461 gattcgcgtc aattttaggt gcggtcaccg gcagcgtggc cgtcaccagc acatccagtt
     2521 gctggaacag ggagtcaatt ttcgtttgca ggatgcggcg aacccgctga gccagcagaa
     2581 aatcagaagc actgatttcc tcgttcaaat agccgccgat ttttcccgcc ggatcattca
     2641 actcggctac tttccctgaa tgaatgagat cgcgaaacgc actcgcaccc tccaccgaaa
     2701 caatcgtgcc ggctgcggct tcccatgggc catcgggcag tgcgatttct gtcgtcttca
     2761 tagccggaag actctcgaga actttgcggg cttcattcac cggcccagtg acgtcaaccg
     2821 ccagttcctt ccactgattc gtaagccacc caagccgcag agattctgtc cggttttccg
     2881 gaggcctggt atatctggct tgcgtctccg gcatggtgcc ggcgtcttca ggatcatggc
     2941 cagcgatggt ctgcagcacc agaccgcagt ctgccgcagt gcggcacata gggccgatct
     3001 tgtccatgga gtaggcgaga gccattgcgc ccgcgcggct cacgcggccg aatgccggac
     3061 gcaatccgct gaccccgcaa aagcctgaag ggcacagaat cgatccccac gtttccgtcc
     3121 ctagggcaaa cgccgccagt cccgcagcca tgattgcgcc gctgccgctg gaggagccgc
     3181 atgtccaatg atcagtgttc cacggatttt ttgccgggcc agtgaatgcc gcggatgcga
     3241 agcgataacc catgcctccg gccagttcga tcatcgctgc tttcccgatc agtaccgcgc
     3301 cggcgtcgtt caacttgcgg atgaccgttg catcatgctc gatccgctgc ttcgcaaacg
     3361 gccgcgcacc ccacgtagtg gggtagcctt ttacggcaag caaatctttc gccgcgtatg
     3421 gaatgccgtg cagcggaccg cggtacttac cggctgcgat ttccttttcg gcagcccgtg
     3481 cctgctctag cgcgagctct ggcgtgagag tgacgtaggc attcagcttt ggcccgatcc
     3541 tgcggctgcg ttccagatag ctctccgcca gttccaccgg agatatctgc tttgtgctga
     3601 cccggcgcga aagctccgtt acggggagat aaagaatgtc ctcgccgagc attatttctc
     3661 tccccgatag ttctggtata cggtggcggg ctcgtcgcca ttcatcactg cgaactcgcg
     3721 cattttttcc aggccttcct gcgtttctgc cagcgaccgg cggatgtcga gcttttgttc
     3781 atcgttgagc cggctgccgt atttgcgaac gatgttggca aatttggctt ctacctccgc
     3841 cttcgcctgc ggcgagagct tagcaatggc ggctttcatt cgctgttcca gcgactggtc
     3901 acctccggcg gcctgcggcg ttggtgtaga aacatgggcc cggtggacta ctgcttcggc
     3961 aggcgcgatg agagtgcttg cggcggtggc ggccgcgccc agagcgaatc gtcttcttcc
     4021 agcggagaac tttggcattg ctgtatgctc ctgaactgat gagccggagg gtaaatgaag
     4081 cttggaaatg ggtcaaactc ggggcagctt aggggcatcc aagtagctgc caccgtcatt
     4141 caaagcctga taactttata agaggaccga ctatgccgcg ctggcttacc tttgattcca
     4201 gaaccgcttc acggctgcga cagcagctcg gcggcgagca ggtttttgaa catggcgcgt
     4261 cggacgccct ggattacgcc ctgaacctgc aaaccagcac agtcacggtt cttcccacag
     4321 aggttcccgg ccaggcagca gttgtcgtga tccgcccagt ttcctatcag cggaccgcag
     4381 ccgcctccgc tttgccatcc agaagggaag tgaggttaat cgcaccggaa gacgccgggt
     4441 cttatcaggc aggagggatc ctgggcctga gagacgagcg cctttatgaa gacgaaactc
     4501 cggttgaagc caaaaagaag aactggtggc agcgcttttg ggatgaaagc tagaaggtga
     4561 aagccagtcc accacgcaac gcccgcgccg attgcaccat gtacagcgtg cgcccgtcct
     4621 ggcccatcac aggcatgtag ccctgcgcca gcaggttgcg gatgtccagc agcgcgtcca
     4681 ttttcgctgg aatcagcgaa gtggaaggaa gcggctggcg aataaagata ctcaaataag
     4741 gatccgactg cccaggagat gcattgaaag catccaccgg cgagagcgca ttgccgctcg
     4801 tccatttgta cgacgcgatc cagcgtgtgc ctccgggaag ggctccggtg atctttccgg
     4861 aaaccgcgtt ctggcggctt gtcgccagtg cctgcgccag tgcctgccat gtggtcgggc
     4921 cttccgcggt caccacgtct tcgttggcgt agtccactgt tgcggtgagc gcctcattca
     4981 gtttccgttc caccaccaca cgagctccgg tgctgctcag gccattcgcg aacgcgtaag
     5041 agaacgttcc ggaataaatg tcaggcagca catcgtccga atagctggag ggatcgcccg
     5101 cgccggtaag aaccaggttc ctcacgcgat cggaaaacag ggccacctgg acacttgtct
     5161 tgcctgcgcg gcgcgaaatg gaaagctcgt tgtggcgcgc gtgctccacg tcaggcagtc
     5221 cgttcgtgag cgacatgcga ggccccgatt cgctcaagtc cgccggagcc gtttcaaacc
     5281 ctttggcccc acgggaatcc ggctctgaac tggcataccg gtattcgagg actgtattcg
     5341 gtccaagatg cacctgaacc gtgccgtaag gtctggccgc gattactcgc ttggcgaact
     5401 caagtgactg aagatcggcg ccatactgca ggtcaataaa gcccgccact gtcatgctgt
     5461 ctgacgtgtt gatctgtagt gccgaatacg gtgaattgtc cgcaacggtg ctgccagggg
     5521 tggcaaagtg ccggtacgtg acggtgaaac gcgggcgcga tgtgccgcca aaatcatgag
     5581 catatgaggc gcgcagcacg ccggtaggtt cacccggagt agcgcctatg ttgccgtgga
     5641 gagagatcgt ccctgaactg aagattgatt tttccagcgc gaacgcggtg gtcatatcac
     5701 cggagccgcc gaatccttcc gcctcagacc cggcaatgaa tgcgactcgc gctttgagat
     5761 ctttctgctg gtcgtctgtg cgagatacaa ccaccatgcc accagcgggg gtcttgtcct
     5821 cctccagcgc tcgcaaaaca ggacggttcg ccgaagagcg tagcgtccag tgccagtcat
     5881 caggttctga agtgctggtt tttttagaag gaagcagagt gagcgcatca gccagtgtgt
     5941 tgagcgtaag gtttaccaga acgtgcgcgc cggcattcag ctttacgttt tcccgcagtg
     6001 acgggagaaa cgatacggcg gatacgcgga tctggtactt gcccggaggg aggttttcag
     6061 ccgagtagtg gccttgcgaa tcagtaaata cggtggtgcc gaccgtcgtg gcggaggtaa
     6121 agatgtccac cacggcgccc atctggggcg cacccgaact atctttgatg taccccgaga
     6181 tcacgccgac gcgggctgcg tacacctgcg taccagccat caggaacacc aacaagcatc
     6241 cgagtttgcg gctcatatcc accacctggg tgaagtggaa ctcccggact actgcaccat
     6301 gaacttcgct gttggcgata tggtctgttt ggaaaccata tcgttgacct taatcgttac
     6361 ctggtaaacg cccggctcca gtttggcgag cgacagtgtt ttctgcaacg tgatctgctc
     6421 gcccacatta cccatctggg ccgttgattc cgtaaagttt accacgggct tgttgttcgc
     6481 ggtgttgaca acctggtatt ccaccacggc agatggcttc ttggtcttgt catcgacgcc
     6541 cagattgtag acctgcatcc agagattaac cttttcttct ctcttaaagg atatcggctt
     6601 gccattcgag ggttgtaccc gcggccgaac tctgcttgtc ccaattacga agttgccggt
     6661 gccgatttcg cgtgcgggg
//
LOCUS       DASQYP010000155         2063 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_221802, whole genome shotgun sequence.
ACCESSION   DASQYP010000155 DASQYP010000000
VERSION     DASQYP010000155.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 2063)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2063)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2063
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_221802"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..791)
                     /locus_tag="VE783_04920"
     CDS             complement(<1..791)
                     /locus_tag="VE783_04920"
                     /inference="COORDINATES: protein motif:HMM:NF013714.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding protein"
                     /protein_id="HYX52770.1"
                     /translation="MDPSILKQLKKIAGNDAVLDRPEELMLYEYDAGVDKCRPGAVVF
                     PLKTEQVSQIMRLASQNTIPVVPRGAGTGLSGGAIARKEAIVLSLARMNKILEIDVPN
                     QRAVVQPGVVNLEVSNATSKYGYYYAPDPSSQKACTIGGNVAENSGGPHTLALGVTVN
                     HVTGLEAVLPDGRIARFGGKTQDSTGLDLTGFFVGSEGTMGVVTEITVKLTRLPEHVT
                     TLLGIYNTVEDAANTVVAITQSGITPAALEMLDGWMVRCVEANVHA"
     gene            920..1294
                     /locus_tag="VE783_04925"
     CDS             920..1294
                     /locus_tag="VE783_04925"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HYX52771.1"
                     /translation="MSHNGNHRLTFLIVEVEPHNGLSTRKLLLESAKHNVITAYSGKE
                     GAEMFHRFPRVDVVCVEAELPDLQKSGLVDNVRQHSRKIPVIALTPRIGATCKWADEV
                     VNSHDPQALLKCLEKLGGRTDI"
     gene            complement(1402..>2063)
                     /locus_tag="VE783_04930"
     CDS             complement(1402..>2063)
                     /locus_tag="VE783_04930"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HYX52772.1"
                     /translation="DDNQVIRDFTTSVQRGEKIALMGRNGAGKTTLINALLANSPTTP
                     EAELRQSSGYAGPLIDGGKVIWGHEASVGYFPQDHRSLIQNGMTVFDWIYQWDPSVSN
                     EEIRGLLGQMLFARDEASKKTDVLSGGEAARILFCKLMLQKPNVLVFDEPTNHLDLET
                     INALNIALQRYQGTVLLVTHDHDLIDEVATRIWHFDQDGIEDFKGTYEDYQSAQMATA
                     K"
BASE COUNT          420 a          554 c          622 g          467 t
ORIGIN      
        1 gcgtggacat tcgcttcaac gcagcggacc atccagccat ccagcatttc gagagctgcc
       61 ggagtgatgc cgctctgggt gatggcaaca accgtgttgg cggcgtcttc aaccgtgttg
      121 tagatgccca gcaaagtggt cacatgctca ggcaggcgag tgagcttgac cgtgatctcg
      181 gtcaccacgc ccatggtgcc ttctgaaccg acgaagaagc cagtcaaatc aaggccggtg
      241 gagtcctggg tcttgccgcc gaagcgggcg atgcgcccat cgggcagcac cgcttcgagt
      301 cccgtgacgt gattcacagt cacgccgagc gccagcgtgt gcgggccgcc ggaattttcc
      361 gccacgttgc cgccgatggt gcaggctttc tggcttgagg gatcaggcgc gtaataatag
      421 ccgtacttcg aggtggcgtt actgacttca aggttcacca cgcccggctg aacgactgcg
      481 cgctgattgg gcacgtcgat ctcaagaatt ttgttcatgc gcgccagcga gagcacaatg
      541 gcttccttgc gggcgattgc gccgccgctc aggccggttc cggcgccgcg aggcaccacg
      601 ggaatcgtgt tctgcgacgc cagcctcatg atctgcgaga cctgctcggt cttcagcggg
      661 aagacgaccg ctccggggcg gcacttgtcc acgccggcgt catattcata aagcatgagt
      721 tcttcaggac ggtcgagaac ggcatcattg ccggcgatct tcttcaattg cttcagaatt
      781 gaagggtcca tgggttggcc tcgtttccga ttggcctaaa ttgtagcgct tatcctgctt
      841 gccagccatg ctagtgacct ctcaaaatcg taagaagacc agaggttgcc ctgcggtgat
      901 tctgtgcatc cattcaaaaa tgtctcacaa tggaaaccat agactcacgt ttctgatcgt
      961 ggaagttgag ccgcacaatg ggctttccac tcgcaaactg ctgctggaat cagccaagca
     1021 caacgtgatc acggcgtatt cgggtaaaga aggagccgag atgtttcatc gttttccgcg
     1081 ggttgatgtg gtttgcgtgg aagccgagct gccagacttg cagaagtcag gactggtcga
     1141 taacgttcgg cagcacagca gaaagattcc tgtgattgcg cttacgcccc ggatcggagc
     1201 cacatgcaag tgggcagacg aggtggtgaa ttcgcacgat ccacaggccc tgctgaaatg
     1261 tctggagaag ctgggcggga ggacggatat ttagatctgg gtatcggaat aacggaatat
     1321 cggtctatcg gatgtctcgc gacgtagttt gtagcaacgc cgatatcccg ataatccgtt
     1381 aaaaccgata ttccgataac ttcacttcgc tgtggccatc tgcgcgctct ggtagtcctc
     1441 atacgttccc ttgaaatctt ctatcccgtc ctgatcgaag tgccagatgc gggtggcaac
     1501 ttcatcaatc aggtcgtggt cgtgggtgac cagaagcacg gttccctgat agcgctgcag
     1561 agcgatattg agcgcattaa tagtttccag atccaggtgg ttggtgggtt cgtcaaacac
     1621 cagaacgttc ggcttttgca gcatgagttt gcagaacagg atgcgggcgg cttcgccgcc
     1681 ggagagcacg tcagttttct tgctggcctc gtcgcgggca aagagcatct ggcccagcag
     1741 gccgcgaatt tcttcgttgg agacagatgg gtcccactgg tagatccagt caaaaacggt
     1801 catgccattt tgaatgaggc tgcgatggtc ctgaggaaag tagccgacgg aggcttcgtg
     1861 accccagatc acttttccgc cgtcaatgag cgggccggcg tagccgctgc tctggcggag
     1921 ctcggcttcg ggagtggtgg gcgagttcgc aagcagagca ttgatcagcg tggttttgcc
     1981 ggcgccgttg cggcccatga gtgcgatctt ctcgccgcgc tgcacgctgg tggtgaagtc
     2041 ccggatgacc tgattgtcat cgt
//
LOCUS       DASQYP010000156         2573 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_238519, whole genome shotgun sequence.
ACCESSION   DASQYP010000156 DASQYP010000000
VERSION     DASQYP010000156.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 2573)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2573)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2573
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_238519"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..753
                     /locus_tag="VE783_04935"
     CDS             <1..753
                     /locus_tag="VE783_04935"
                     /inference="COORDINATES: protein motif:HMM:NF025053.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PP2C family serine/threonine-protein
                     phosphatase"
                     /protein_id="HYX52773.1"
                     /translation="GYDSRYGIFVVCDGMGGQAAGEVASKIAVDVLLRYFREKQIAAG
                     RDPQVSTEPTTAITLAAALQEANRAIFEAAKDQMGRLGMGSTVVAALVRGHSLTIGHV
                     GDSRIYLVRQGEIQQLTQDHSLVMEQVRLGYITREQAEQSELQNVILRALGTEADVEP
                     DIENLVTIPGDTLLMSSDGLTRHLSEDEILATISGADSLQHACSALVEAAKQRGGDDN
                     ITCLLLRIVEQRWYKTFLSKLFPGGQQWQNSI"
     gene            735..1472
                     /locus_tag="VE783_04940"
     CDS             735..1472
                     /locus_tag="VE783_04940"
                     /inference="COORDINATES: protein motif:HMM:NF028007.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051219 - phosphoprotein binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FHA domain-containing protein"
                     /protein_id="HYX52774.1"
                     /translation="MAKLYLKFDQSVLKEITLSQAPTTIGRLPDNSVQIDNLAVSGHH
                     ARITWEKDHYEIEDLGSLNGTYINNERVGKAKLRHCDLVKIGKHEIEFRGEGAAPVAA
                     IQTKTGPVIPKLENTVLLDTKHAQEMIAAKNSGPMAMAAAATPAKERIGLLSVVEGKT
                     DSEKYILTSKMTMIGKSAMATIKLKGWFAPTSAALISRRENRYFIAPEHKVRLKINGE
                     EVQSQRELAPGDLIEIAKMKAAFSFQD"
     gene            complement(1469..>2573)
                     /locus_tag="VE783_04945"
     CDS             complement(1469..>2573)
                     /locus_tag="VE783_04945"
                     /inference="COORDINATES: protein motif:HMM:NF018884.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016791 - phosphatase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="SpoIIE family protein phosphatase"
                     /protein_id="HYX52775.1"
                     /translation="RDKSQTPALTCGLNSQGASLLDDADVSRSVINDAIHSASEFISG
                     DVSQQSMFSARQSIMLHELRTIVAIPLRRKRVGDDASTEAEGVLYLDSRMASRTLSGV
                     APDVLRALAGECAAVLESARLMEAEQSAQRHQQEMEIAASIQRSLGSDADLQCEFARV
                     TGRSIPSREVGGDFFEVHTSPEAVTAILADVSGKGISAALLASVIQGMYYAQITAGAS
                     LVDVAASINRFLCLRVAGQKYATMVIAQVDRSGLLRIVNCGHVPLLVAVNGNCARVED
                     GDLPVGLMPDAAFRILEQQLAPGTRVCLMSDGISEAENSAGAEFGISAVEELLCSGSD
                     VHAILAAVNSFTGNSDLQDDRTVVTIDYTGATV"
BASE COUNT          586 a          782 c          764 g          441 t
ORIGIN      
        1 gggtacgact cgcgctatgg catcttcgtg gtttgcgacg gcatgggcgg ccaggcggcc
       61 ggcgaagtcg ccagcaagat cgccgttgac gttctcctcc gctacttccg cgaaaagcaa
      121 atcgcagccg gccgcgatcc acaggtctca accgagccca caaccgcgat cacccttgcc
      181 gcagcgctgc aggaagccaa tcgagcgatc tttgaagccg ctaaagacca gatgggcagg
      241 ttggggatgg gatccacggt ggtggcggcg ctggtgcgcg gccactcact tacgattggt
      301 cacgtgggcg acagccggat ctatctcgta cgccagggcg agatccagca gctcacccag
      361 gaccactcac tggtgatgga gcaggtgcgg ctcggctata tcacgcgcga gcaggcggag
      421 caatcagaat tgcagaacgt gatcctgcgc gcgctgggca cggaagccga tgtagagcct
      481 gatatcgaaa acctggtgac gatccccggt gacacgttgc tgatgagttc cgatgggttg
      541 acgcggcatt tgagcgaaga cgagatcctg gcgacgatca gcggcgccga ttcactccag
      601 cacgcgtgca gcgcattggt ggaagccgca aaacagcgtg gcggcgacga caacattacc
      661 tgcctgctgc tccggatcgt ggagcagcgc tggtacaaga cattcctgag caaactgttt
      721 cccggaggcc agcagtggca aaactctatc tgaagttcga tcaatctgta ctgaaagaga
      781 tcactctttc ccaggccccc accaccattg gccgcctccc tgacaacagc gtgcagatcg
      841 ataaccttgc ggtctccgga caccacgcgc gcatcacgtg ggagaaggac cactacgaga
      901 tcgaagatct gggctcgctg aacggcacct acatcaacaa cgaacgcgtg ggcaaggcaa
      961 agcttcgcca ctgcgacctg gtaaaaatag gcaaacacga aatcgagttc aggggtgaag
     1021 gcgctgcgcc ggtggctgcc atccagacga agactggccc cgtgattccg aagctggaaa
     1081 acaccgtgct gcttgacacc aaacacgccc aggagatgat tgccgccaag aatagcggcc
     1141 ccatggcgat ggccgccgct gccacaccgg ccaaagagcg catcggcttg ctgagcgtgg
     1201 tggaaggcaa gaccgacagc gaaaaatata ttctgaccag caagatgacc atgatcggca
     1261 aatcggccat ggcgaccatc aagctgaaag gctggtttgc tccgacttcc gccgcgctga
     1321 tcagccgccg ggaaaacaga tatttcattg ctccggaaca caaagtgcgt ttgaagatca
     1381 atggcgaaga agtgcagagc cagcgcgaac tggcgcccgg cgacctgatc gaaatcgcaa
     1441 agatgaaagc ggcgttcagc ttccaggact aaacagtggc gccggtgtag tcgatggtga
     1501 ccaccgtgcg atcatcctgc aggtcgctgt tgccggtaaa cgaattcacc gcggccagaa
     1561 ttgcgtgaac gtcactgccg gaacagagga gctcttccac ggcagatatc ccaaactcag
     1621 cgccggcgga attctccgct tcgctgatgc catcgctcat caggcagacg cgcgttcccg
     1681 gcgcgagctg ttgttcaaga atcctgaacg cagcatcggg catcagcccg acgggcaaat
     1741 ccccatcttc cacgcgcgcg caattgccat tcacggccac cagcagcggc acgtgcccgc
     1801 aattcacgat cctgagcagc ccgctccggt ccacctgagc gatcaccatg gtggcatact
     1861 tctgtccggc aacgcgcagg cacagaaagc ggttgatgga ggccgccaca tccaccagag
     1921 aagcgcctgc ggtgatctgc gcgtaataca tgccctggat cactgaagcc agcaaggccg
     1981 cggaaattcc cttgccggaa acgtctgcga ggatcgccgt aaccgcctcc ggcgaggtat
     2041 gcacctcaaa gaagtcgcct ccaacctcgc gagaggggat gctgcggccg gtcacgcggg
     2101 cgaactcgca ctgtagatcc gcatctgatc ccaggctgcg ctggatggaa gctgcaattt
     2161 ccatttcctg ctgatgacgc tgggcggact gctcggcttc catgagtcgc gcgctttcca
     2221 gaaccgcggc gcactcaccg gcgagagcgc gcagcacatc cggcgcgact ccggagagcg
     2281 tacgcgaagc catccggcta tcgaggtaaa gtacgccttc ggcctcggta gaagcatcgt
     2341 caccgacgcg ttttcggcgc agcggaatgg ccacaatcgt ccgcagctcg tgaagcatga
     2401 tgctctgtcg cgcggaaaac atgctctgct ggctcacgtc gccggagata aactctgagg
     2461 cggaatgaat ggcgtcattg atcacggagc gggaaacatc cgcatcatcg agcaatgagg
     2521 ctccctggct gttcaaaccg cacgtgagag ccggggtttg gctcttgtca cgc
//
LOCUS       DASQYP010000157         9655 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_281011, whole genome shotgun sequence.
ACCESSION   DASQYP010000157 DASQYP010000000
VERSION     DASQYP010000157.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 9655)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9655)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9655
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_281011"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..211)
                     /locus_tag="VE783_04950"
     CDS             complement(<1..211)
                     /locus_tag="VE783_04950"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52776.1"
                     /translation="MRLWALCALLVIVSAPAFAQVQTVGDMSFAVPEGWEYQGKPDGG
                     LMLLKQGQNFWVVTVYAPRPASGNQN"
     gene            complement(408..638)
                     /locus_tag="VE783_04955"
     CDS             complement(408..638)
                     /locus_tag="VE783_04955"
                     /inference="COORDINATES: protein motif:HMM:NF013921.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HYX52777.1"
                     /translation="MSLLKPNSSRWMSEHGTRFAWQEGYGAFSVSASKLKTVENYIAN
                     QEQHHRNMTFEDEFIGLLRKHGIEFDPEYVFG"
     gene            complement(643..849)
                     /locus_tag="VE783_04960"
     CDS             complement(643..849)
                     /locus_tag="VE783_04960"
                     /inference="COORDINATES: protein motif:HMM:NF013921.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HYX52778.1"
                     /translation="MPHTYSQNYLHVVFSTKERRKLIKQQMQPKLWSYMAGIARNHNF
                     LVLANGGMDDHAHLLIQLPPVLSL"
     gene            complement(1364..2719)
                     /locus_tag="VE783_04965"
     CDS             complement(1364..2719)
                     /locus_tag="VE783_04965"
                     /inference="COORDINATES: protein motif:HMM:NF025885.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54 dependent transcriptional regulator"
                     /protein_id="HYX52779.1"
                     /translation="MPNILVVDDEREIRETLRGILEDEGYKVRAAESGEACLDDLKKH
                     RAELVLLDIWLPGIDGLETLERIRMQHGDDAPEVVMISGHGTIETAVKATKLGAFDFL
                     EKPLSLDRTLIVLKNALDAHRLRQENSEFKKQMQARSVIVGESIPMKALRQQITIMAP
                     TNGRVLIYGESGTGKELVAHAIHAQSLRKDNLFVEVNCAAIPEDWIESELFGHRKGAL
                     PGATGDKEGKFEKAHGGTLFLDEVGDMSLKTQSKVLRALDEQKFTPVGDDEPLQVDVR
                     VIAATNKDLEEEISRGNFREDLFYRLNVIPFYVPPLRERKEDIAMLARHFLKEFSAAY
                     SRRSREVTDDAIETLMRYSWPGNVRELRNVVERLVIMNPTVHKIERKHLPPLMHREGG
                     RTTAGFSTLHQARAAYERDYILKKLDENHGNVTRTAEVLGLERSHLYRKMKTLGIAVK
                     E"
     gene            complement(2712..4892)
                     /locus_tag="VE783_04970"
     CDS             complement(2712..4892)
                     /locus_tag="VE783_04970"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HYX52780.1"
                     /translation="MVPLVLGIVLLFGIVFSQQAFNLKTLRPDSAQETLVLVALSALV
                     FLLLVVLSFVLVRNLVKLYAERRLGVLGSKFRTRMLLSALALSFAPAILMFMFAYGLM
                     NRSIDRWFSMPVSELQQDSGRVAALLSDYAGDNAHQEAAEIASAPETQHSFDSASYSG
                     VLHVFRRHEQTLQGGFALALLDGDSVATWRAPQTWPILRAALPDLNQLESKPQKWVFH
                     GTEYLIATASVGSKGKILIAMPLPRDFSPTLEQINQNQRNYLTLSRESKRIRGLYMLL
                     LTLLTVLLLFASTWSSLFLAKLVTRPVEALAEATRQISLGHLGHRVEVSAADELGQLV
                     SSFNTMAAELESSRRKIEISAQELTKTNAELDQRRRHIETILESIPTGVLSLGPDGRV
                     THSNVAFGRMFWQNGGAPSVGQTLKHVFSAEIAGDLDHLLRRADRMGITAAQFEIPAE
                     KQNLNVSVTVSSVQHGRQRLGYVIVFEDFSDLLKAQKEAAWREVARRVAHEIKNPLTP
                     IALSAERIRRHLDRGSQPDKNSLAVINSCAGTISEAVQTVRSLVDEFSVLAKFPEAKP
                     RPADLNEIVESTLAMFNGRLDGIHVEKDLGAGLPQAMADPEAIKRALANLVDNAAEAM
                     KDSLVREIHISTSLLDSRDALEILIADTGHGINSEVKEKLFLPYVSTKKRGTGLGLAI
                     VRRIIEDHHGSVRVEENRPVGAKFIVELPLAGDAVQSETAKTNA"
     gene            5208..5960
                     /locus_tag="VE783_04975"
     CDS             5208..5960
                     /locus_tag="VE783_04975"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52781.1"
                     /translation="MKNTTLAALICSASLAMSAYAVQYPAGSSSAGQAGTAPTTSQTP
                     GSSSTGSMGSPSTGSQSSQGSSGSMGSQSTTGSSGSQSSPSSSSPSSAGSSQSQPGRP
                     SIDDQVRVLTQELNLNQDQQSKMHNILDDQHQQAMTIVNDQSMSRDDKIQKIRTLREA
                     TITKARGILDDTQKKKLDAMIQEQQMRQGGPSSSSGSSNSPSGSSSPSSSSGTTSSPS
                     STSGTTSSPSSTTSPSSTTPPSTSNPSQRPPR"
     gene            complement(6229..8343)
                     /locus_tag="VE783_04980"
     CDS             complement(6229..8343)
                     /locus_tag="VE783_04980"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52782.1"
                     /translation="MSQPGSGVGSLSTICPPPDPTPTPTPAPTPTPITGTIEPKYIVL
                     TVTYAPPGSASNVTYSNSTMLGSSSSVSSSFQNDVNVSASITTGFSLFGLFGGKTTQT
                     ASTQLTQETDSSSTVALNETTTTTTTIRGPSSSALGLDHDEDIIWVWLNPAINLSLNS
                     STSFVWTGFLFDQNDPAGTTDIIGIPVKFLNGHAAMPSNIADVLARRWAPRTLCTSAD
                     PACGVDGTKDPGLDATDLATILQADPFANPSYVINIPSGGSCTADQRFCRTTNTNLQY
                     SPPPPGGQPITQVYTLTHQATATEGQGGFNTYKVSIGTQGSVSGSFFVTLSAKLNIAD
                     TVTLNNKWSSTSTNQVGQTATASVTGPSAADNYTGPVEFEIFQDNVYGTFMFGFIPQP
                     TFTLFTSPSSETVSLGNCVDSTVNVSALVSGFNSSVNLTVSGLPQGVTATFSPNPIVG
                     AGSSNMHVCAASTAPVTSSSLTVQGMVGIEAHTTTEALAVTNFTLGASPSSQSVVVGG
                     ATSYTVSVTPVNGFNGAVALSLCGAPAGITGTFSPSSISGSGSSTLNISTPASIAPGT
                     YTICVAGTNGALTHTANVALTVNPVAVGDFALSASNDFLEFNAGTGSTSTISVSPLNG
                     FNGTVTLSVNGGGLPASLSSTSVTGSGAVTLTVRSGTSTPAGDYLVTVTGTSGSLSHS
                     ITIDVTVDSSGGCGTRIICQLP"
     gene            9207..>9655
                     /locus_tag="VE783_04985"
     CDS             9207..>9655
                     /locus_tag="VE783_04985"
                     /inference="COORDINATES: protein motif:HMM:NF012955.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HYX52783.1"
                     /translation="MLSNLYLSLGATLVYTLGLSMSGQPKPEWCRNLPRPAYKRLEKV
                     TQPEEWFQVYRIRAGVFAIYEPHQSEEVISYLIAGQKRALMFDTGLGIGDIKKVAQHL
                     TSLPISVLNSHTHNDHVGGNFQFSDIYGMDTAFTRLNAKGSREDAQA"
BASE COUNT         2011 a         2737 c         2859 g         2048 t
ORIGIN      
        1 cgttctggtt gccgctggcg ggccggggcg cgtaaacggt gacgacccag aaattctggc
       61 cctgcttcag cagcatgagg ccgccatccg gcttgccctg atattcccag ccttcaggga
      121 cggcgaagga catatcgccg acggtttgca cctgcgcgaa ggcgggcgcg gagacgatga
      181 caagtaacgc acaaagggcc caaagacgca taaaggcgag tcctccatgg aggggagtga
      241 gagcccggag cccgatggcg tggtgatttt accgcagaga agccgcgaag atcgccggaa
      301 tcgcgcggaa tcggaaaagg cccagcgccg taggcgcgaa atgagttagc ccagaccagg
      361 tttgggtagc cggtcaagaa gaactggagc gccgtaggtg cggcacatca tccgaagacg
      421 tattcaggat caaattcaat tccgtgtttt cgaagcaagc cgatgaattc atcctcaaac
      481 gtcatgttgc gatggtgctg ctcctgattg gcgatgtagt tttccactgt cttcagcttc
      541 gatgcgctga cgctgaacgc tccgtaccct tcctgccagg cgaaccgcgt cccgtgctcg
      601 ctcatccatc tggacgagtt cggcttaagg agtgacacag cgtcagagcg agagcaccgg
      661 gggaagttga atgagcagat gtgcgtggtc atccattccg ccattcgcga gcacgaggaa
      721 gttgtggttg cgggcgatcc cagccatgta cgaccagagc tttggttgca tttgctgttt
      781 gattagcttg cggcgctctt tggtactgaa tacgacatgg agataattct gggagtaagt
      841 gtgtggcaag gtgtcgcctc ctacggggct caccatccta aatgaacgcc tacccagacc
      901 tgccggtctg ggctaactca tttcgcgcct acggcgctgg tactcgtacg atttcgacga
      961 ttcacgcgtc gacgttaaat tgagaacatt cgacggcgct ggtgtttttc caaatctaat
     1021 gacattccag acggattcgg atgatgggtg ccgcacctac ggcgctccac ttcttattgg
     1081 ctgcattccc agacctgccg gtctgggcta actcatttcg cgcctacggc gctggtgttt
     1141 gtacgattgc ggtgattgac cgtcgatggt cagatgagag attcgaccgg agtggtgttc
     1201 tcccgagtcg tcattggcat tccacacgga ttccgatgat gtgccgcacc tacggcgctc
     1261 cacttcttat tggctgcatt cccagacctg ccggtctggg ctaactcatt tcgcgcctac
     1321 ggcgctgggt ccgacgatta cgcgcgatta cggcgatctg ttcctactcc tttaccgcga
     1381 ttcccagcgt cttcatcttt ctataaagat ggctgcgttc caggcccagg acttctgccg
     1441 tacgggtgac gttgccgtga ttttcgtcga gctttttgag gatgtagtcg cgttcgtagg
     1501 cggcgcgcgc ctgatgaagg gtggagaagc cggcggtggt gcgtccgcct tcacgatgca
     1561 taagcggcgg caggtgcttg cgctcaatct tgtggaccgt gggattcatg atcaccagcc
     1621 gctccaccac gttgcgcagc tcgcgcacgt tgccaggcca ggagtagcgc atcagggtct
     1681 caatggcatc gtcagtaact tcacgcgagc gccggctgta ggcagcggaa aattccttga
     1741 ggaagtgccg cgccagcatg gcgatgtctt ctttgcgttc gcgcagaggc ggcacgtaaa
     1801 agggaattac gttcaggcga tagaagaggt cttcacggaa attgccgcgg gagatttcct
     1861 cttccagatc tttattcgtt gcggcgatca cacggacatc aacctgcagc ggctcgtcgt
     1921 cgcctaccgg ggtgaacttc tgttcgtcga gtgcgcggag gacttttgac tgcgtcttga
     1981 gactcatgtc gcccacttca tccaggaaga gcgtgccgcc gtgggctttt tcgaatttac
     2041 cttctttatc gccggtagcg ccgggcagcg cgcccttgcg atggccgaag agctcgctct
     2101 caatccagtc ttcaggaatg gcggcgcagt tcacctcaac aaacagatta tctttgcgca
     2161 ggctctgcgc gtggatggcg tgcgccacca gctccttgcc ggtgccggat tcaccataga
     2221 tgagcacgcg gccgttggtg ggcgccatga tggtgatttg ctggcgcagc gccttcatgg
     2281 gaatactttc tcccacgatc acgctcctgg cctgcatctg ctttttgaat tccgagtttt
     2341 cctggcgcag gcggtgcgca tcaagcgcgt tcttgagcac gatgagcgta cgatcgagcg
     2401 agagcggttt ttccaggaaa tcaaacgcgc ccagcttggt ggccttgacg gcggtttcga
     2461 tggtgccgtg gccggagatc atgacgactt ccggcgcgtc gtcaccgtgc tgcatgcgga
     2521 tgcgttcgag cgtttcaagg ccatcgatgc cggggagcca gatatcgagc agcaccagtt
     2581 cggcgcggtg ctttttcagg tcgtcaaggc aggcttcgcc gctttccgcg gcgcggactt
     2641 tgtagccttc atcttcgagg atgccgcgca gggtttcgcg aatttcacgt tcatcatcca
     2701 ccaccaggat gttaggcatt cgtttttgcg gtctccgatt ggacggcgtc gcccgcgagc
     2761 gggagttcta cgataaactt cgcgcccacc gggcggttct cttccacgcg cacgctgccg
     2821 tggtggtctt caatgatgcg gcgaacgatt gccagcccca ggccggtgcc gcgcttcttg
     2881 gtggagacat acggaagaaa aagtttttcc ttgacctcac tgttgatgcc gtggccggta
     2941 tcggcgatga ggatttcgag ggcgtcgcgc gaatcgagca gagaagtgga gatgtgaatt
     3001 tcacgcacca gcgaatcctt catggcttcg gcggcattgt cgacgagatt ggccagcgcg
     3061 cgcttgatgg cttcgggatc ggccatggct tgtggaaggc cggcgcccag atctttctca
     3121 acgtggatgc catcaagccg gccgttgaac atagccagcg tgctctccac gatttcgttg
     3181 aggtcagcgg ggcgcggctt ggcttcaggg aacttggcga ggaccgagaa ttcatcgacc
     3241 agagagcgga cagtttgcac cgcttcactt atggtgccgg cgcagctgtt gatgaccgcg
     3301 agggagtttt tgtccggctg cgagccacgg tccaggtggc ggcggatgcg ctcggcggag
     3361 agcgcgatgg gcgtgagcgg gttcttaatc tcgtgcgcca cgcgccgcgc cacctcacgc
     3421 catgcggctt ccttctgcgc cttgagcagg tcactgaaat cttcaaacac gatcacgtag
     3481 ccgaggcgct ggcggccatg ctgcacggat gagacggtga cgctgacgtt caggttctgc
     3541 ttctccgcgg gaatttcaaa ttgcgcggcg gtgatgccca tgcggtcggc gcggcggagc
     3601 aggtggtcga ggtcgccggc gatttcagcg gagaagacgt gcttcagagt ctggccgacc
     3661 gagggcgcgc cgccgttctg ccagaacatc cggccgaacg cgacgttgct gtgcgtcacg
     3721 cgaccgtcgg gtccaagcga gagcacgccg gtgggaatac tttccaggat tgtttcaatg
     3781 tggcggcggc gctggtcgag ctcggcgttc gtcttggtga gctcctgtgc tgaaatttcg
     3841 atcttgcggc ggctggattc cagctcggcc gccatggtgt tgaatgagga gacgagctgg
     3901 ccgagttcgt cggcggcgga gacttctacg cgatgcccga gatgcccgag cgaaatctgc
     3961 cgcgtcgcct cggccagagc ttctacgggc cgggtgacca gcttggccag gaagagcgat
     4021 gaccaggttg aggcaaatag caagagcacg gtgagcaagg tgagcagcaa catgtacagg
     4081 ccgcggatac gcttggattc gcggctgagc gtgagatagt tccgctggtt ctggttgatc
     4141 tgctcaagcg taggtgagaa gtcgcgcggc agcggcatgg cgatgagaat tttgcctttg
     4201 ctgccgacgg aggctgtcgc aatgaggtat tccgttccgt ggaacaccca cttctgcggc
     4261 ttgctctcca attgattgag gtcgggcagg gccgcgcgta ggattggcca ggtctggggc
     4321 gcgcgccagg tggcaacact gtcgccgtca agcagggcga gcgcgaagcc gccctggagt
     4381 gtctgctcgt ggcggcggaa gacatgcagc acgccggagt agctcgcgct gtcgaaagaa
     4441 tgctgcgtct ccggcgcgga ggcgatctct gcagcttcct ggtgcgcgtt gtcgccggcg
     4501 tagtcggaga gcagagccgc cacgcgacct gaatcctgct gcaactcgct cactggcatg
     4561 ctgaaccatc tatcgatgga ccggttcatt aagccgtagg caaacataaa catgaggatc
     4621 gctggggcga agcttagggc cagggctgag agcagcattc gtgttcggaa cttcgacccc
     4681 aacacgccca gccgccgctc cgcgtagagc ttgaccaggt tacggaccag cacaaagctc
     4741 aacacaacga gcagcagaaa aaccagggcg gaaagtgcga ccagtaccag cgtctcctgc
     4801 gccgagtccg gacgcagtgt cttcaagttg aacgcctgtt gtgagaaaac gattccgaaa
     4861 agcaggacga tcccaagtac cagcgggacc attagcgcgc gacgctgccc gagcgagagt
     4921 gagcgtttat cctcttgtcg gttaggcagc acaaatcact ctttttgcgt ggagactctg
     4981 cttcacatta tatgcgcgct gcgcaagagc agtttcacca ggcgcggagc actgctgata
     5041 aagccaaccc aatctggagc cgctctcctc aacagctctg atccgggttg cctcagccca
     5101 gaaaatcacc tgtcctctct cgtgccctct ccagctcgca attcagcatc agacattgga
     5161 gtcgcaacgc tgattccgac gagatttccg aggagaacga ggtttcaatg aagaacacaa
     5221 ctttagccgc actcatctgc agcgcatcgc ttgcgatgag cgcctacgcc gtgcaatatc
     5281 cggctggatc atcctctgcc ggccaggccg gaaccgcgcc caccacttcc cagacccccg
     5341 gctccagcag cacaggctcc atgggttcac catcaacggg ctcgcaatca tcccagggca
     5401 gctccggctc tatgggttca cagagcacaa ccggctcatc gggctctcaa tcgtcgccca
     5461 gcagcagctc acccagcagc gccggaagct cgcagtcgca gccggggcgt cccagcattg
     5521 acgatcaggt ccgcgtgctc acccaggagc tgaacctgaa tcaggatcag cagagcaaga
     5581 tgcacaacat tcttgacgat cagcatcagc aggcaatgac gatcgtcaac gaccagtcca
     5641 tgtcgcgcga cgacaaaatc cagaagatcc gcacgttgcg tgaagcaaca atcaccaagg
     5701 ctcgcggcat tctcgacgac acgcagaaga agaagcttga cgccatgatc caggagcagc
     5761 agatgcgcca gggtggcccg tcttcttcat ccggcagctc caactcgccc agcggctcta
     5821 gctctccgag cagcagttcg ggaactacca gttcgccgag cagcacttcc ggaacaacgt
     5881 cgtcgccaag cagcacgact tcacccagca gcaccacgcc gcccagcacc agcaatccat
     5941 ctcagcggcc tccgcgctaa gaatcacatc aaccaatcag ccctgctccg cggagcaggg
     6001 ctttttgctg gcccgctcgc ggtggtattg ccgcacgcca tcagaatcac cgcatcgatg
     6061 atgcagagcc accgccatct cggcatcggc gctgcgctca atctacgaat cggccttccg
     6121 accgaaccca acccgcacaa agctacggcc gcgtggggga cggaattcca cgccaaaaat
     6181 cttggggcgg cttacgccgc cccagagtta gtcccgcaga gcggtgaatt atggaagttg
     6241 gcagataatc cgcgttccac atccgccgct gctgtccacg gtgacatcaa tagtgatgct
     6301 atgtgagagg cttccgctgg tgccggtgac cgtgaccaga tagtcgcctg ccggagtgct
     6361 tgtacccgag cgcaccgtca gcgtcaccgc gcccgaacca gtgactgagg tggaagagag
     6421 cgatgcgggc agaccgcccc cattcacact caacgttact gttccgttaa acccattcaa
     6481 gggcgaaacg gagatggtgg atgtcgagcc tgtcccggcg ttgaactcca gaaaatcatt
     6541 cgaggcgctc agggcaaaat ccccaacggc aacgggattt accgtaagcg ccacgtttgc
     6601 ggtgtgagtc agcgcgccat tggttccggc cacgcagatg gtatatgtcc caggcgctat
     6661 tgatgccggg gtggaaatat ttaaggttga cgaacccgac ccgctgattg acgacggaga
     6721 aaaagtcccc gtaatgccag ccggcgcgcc gcacaggctt aaagccacag ctccgttgaa
     6781 gccattcaca ggggtgacag aaaccgtgta agaagtcgct ccccccacta caactgactg
     6841 cgaactgggg cttgctccaa gggtgaaatt agtaactgcc aacgcttccg ttgtggtgtg
     6901 ggcctcaatg cctaccattc cctgcaccgt cagcgagctg ctggtaaccg gcgctgtgga
     6961 agcggcacaa acatgcatgt tggaagagcc ggcgcccacg attgggttag gactaaaggt
     7021 ggcggtgact ccctgtggca agccactaac ggtcagattt acgctgctgt tgaagccact
     7081 taccagagcg ctgacgttaa cggtggaatc tacacaattt ccaagagaca cggtttccga
     7141 gcttggagag gtaaacagcg taaacgtggg ttgagggatg aacccaaaca tgaaggtgcc
     7201 gtacacgttg tcctggaaaa tctcaaattc caccggaccg gtgtaattat cggcggcgct
     7261 gggccctgtg actgaagcgg ttgctgtctg gcctacctgg ttggtgctgg tgctgctcca
     7321 tttgttgttt agggtaacgg tatcggctat gttcagctta gctgataacg taacaaagaa
     7381 gctcccggaa acgctgcctt gtgtgccgat gctgaccttg tacgtgttga agcctccctg
     7441 tccctctgta gcggttgcct ggtgagtcaa ggtatagacc tgcgtaattg gctggcctcc
     7501 cggcggtggt ggcgaatact gcaggtttgt gttggtagta cggcagaagc gctgatctgc
     7561 ggtgcaagag ccgccggagg gaatattgat cacataagat ggattcgcaa acggatcggc
     7621 ctgaagaatg gtcgccaggt cagttgcatc cagtcccggg tccttggtgc catccacacc
     7681 gcaggccgga tcggcagatg tacagagtgt gcgcggcgcc caacgacgcg ccagcacatc
     7741 cgcgatattg gaaggcattg cagcatgccc gttcaggaat ttcacgggga tgccgataat
     7801 gtctgttgtg cccgcaggat cgttctggtc gaataggaat cccgtccaga cgaaactcgt
     7861 gctggaatta agtgagaggt tgatcgccgg gtttagccac acccagataa tgtcctcgtc
     7921 gtgatcgagt cctagggcag agctcgaagg cccccggatg gtggtggttg tggtcgtggt
     7981 ttcattcagg gccaccgtcg agcttgaatc ggtttcctgc gtcagctgtg tcgaagcggt
     8041 ttgagtggtc ttgccgccaa aaaggccgaa cagcgaaaat ccagttgtta tggacgcgct
     8101 cacgttcacg tcattttgga acgaactgga gaccgaagag ctgctgccca gcatggtgct
     8161 gttgctgtaa gtaacgttgc tggccgatcc cggcggcgca taggttaccg tcaagacgat
     8221 atatttcggc tcgatcgttc ccgtaatggg cgtgggtgtc ggcgctggtg tcggtgtggg
     8281 tgtggggtct ggaggtgggc agatggttga gagcgatcca acaccgcttc ccggctgaga
     8341 catccctccc gggaccgccg ctggctgcac gcaaaggcct tggatagggc ctccgctggt
     8401 ttgcgctaac agaatctgcg ctgagaacat gcacacaaaa atacccagca agaacctttt
     8461 cttcactttt ctgtcctctc aattgttggg tacggcttgt tgagtagaca caggaggacc
     8521 gcgcacaccg ctccgtggtt gggccgaaag gggtaaacgg caggggatgt ttatttcacg
     8581 tgtcgagcag atttttcacg cctcgctccg ccgccttgtg tgttgtatcg aagaaagaca
     8641 tgttcgcgga acgatataag aagaagtgct taacaccacg gaagggtttt cgttttcctg
     8701 tttcctgaat tcaggaactc tggatgcatt acaggagaac ctttctcgct cacaactaca
     8761 taactgaacc ggaacgcggt ttgatatcgg acaaagccag cttgctaccg tgttaaccgc
     8821 aagattctct gagagttcgt ggcagttctc gaatcagatc gcaatcaaaa tgtgaggagc
     8881 ggcagcgtgc cgagagaaac ggttgaaagg agcttagttt atgaaaatgg aacaacaaac
     8941 aaaggcccgc ttcttgcgga agataccctc gtttgcaacg aattcaaaaa cagggttaag
     9001 caaaagcgat tcaaccagcc ctactgactc aacgcaaggg ctctatcagg ctgcgctcag
     9061 tagccgccca gcaccagcaa ttcatctcag cggcaccctc cctaaagatc acatcaacca
     9121 gtcagcccgg ttcctccgag cagggctttt cttgtcctga acacgtcgct gaactcccga
     9181 taggccgtta caatcgctca tcatttatgt tgagcaatct ctatctcagc ctcggcgcca
     9241 cgctcgtgta cacgcttggt ttatccatgt ccggccagcc caagccggag tggtgccgta
     9301 acctcccgcg ccccgcctat aagaggctcg aaaaagttac acagccggag gaatggtttc
     9361 aggtctaccg catccgcgcc ggcgtatttg ccatctacga accgcaccaa tcggaagagg
     9421 tgatctcata tctcatcgcc ggccagaaac gcgcgttgat gtttgacacc ggcctcggca
     9481 tcggcgacat caagaaagtc gcgcagcatc tcacatcgct tcccatcagc gtgctcaatt
     9541 cgcatacgca caacgatcat gttggcggaa actttcagtt tagtgacatt tacggcatgg
     9601 ataccgcctt cactcgcctg aacgccaaag gctcacgtga agatgcccag gcgga
//
LOCUS       DASQYP010000158        18810 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_196558, whole genome shotgun sequence.
ACCESSION   DASQYP010000158 DASQYP010000000
VERSION     DASQYP010000158.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 18810)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18810)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18810
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_196558"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..187
                     /locus_tag="VE783_04990"
     CDS             <1..187
                     /locus_tag="VE783_04990"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52784.1"
                     /translation="TRNRFTPRMQCLIHANIKASFEYQIRPQQFVTVVTNPITGAPAA
                     LNPFRTNTVVVALEYVF"
     gene            208..771
                     /locus_tag="VE783_04995"
     CDS             208..771
                     /locus_tag="VE783_04995"
                     /inference="COORDINATES: protein motif:HMM:NF012355.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxypeptidase regulatory-like
                     domain-containing protein"
                     /protein_id="HYX52785.1"
                     /translation="MKSKYLFIVVALVLIAQACFAGSVKGKVAPGKSVVYLEAAAPQM
                     AEKTVTMDQKGLLFQPHVMVIQTGTTVEFLNSDKVQHNVFWPNVSGDKKKSHNMGTWP
                     QGQKKPFKFTEPGVVTLLCNVHPEMAGYIIVSPTPFFAETSADGEYDLANVPDGQYTI
                     TAWHEGKKIQSKKITVSGNTTADFTLQ"
     gene            842..2791
                     /locus_tag="VE783_05000"
     CDS             842..2791
                     /locus_tag="VE783_05000"
                     /inference="COORDINATES: protein motif:HMM:NF019604.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HYX52786.1"
                     /translation="MQKRFLNKTVDRDWLNTNFPCMMACPAHTNAGRYVSLIAEGRFE
                     EAYRFARDPNPLASICGRVCAHPCETACRRGEIDRPIQIRALKRFLTERYGPESRNST
                     APSTQAQPPINKKVAVIGAGPVGLSAAHDLALMGYSVTIFEAAAVPGGMLYLGIPEYR
                     LPRDVVEAQVREILNTGDVTLRLNQRAGKDFSIEDLRSQGFDAVLAAVGAHRSRDLSI
                     PGVDLDGVHKGIDFLLNVNLGYQFTIGKKVVVIGGGNVAMDVARSAAREVVRQHEIPT
                     DDWTKNVEAVASHEMVDISLSALRMGASEVHIVCIERRDEMPAALEEIEEAETEGVTI
                     HAGFGPNRVIGLNGRVSALETVRTSRVFDENGRFNPQFQQGSETLVECDTVILAIGQA
                     PNLDFLGQESKIKISPRGLIEVDRRNLMTSVPGIFAGGDCVFGPRLIIDSVADGKRAA
                     AGIDEFLRGHQQADPVIEIEVLNRHQMITNYMEIARHSVPMLPLERRTGMTEVEVGFD
                     EKTAVEEAQRCLRCWINTVFEGTEVDGTECILCGGCVDVCPEQCLELVPLDQFDFPEP
                     VLSYLRDNEAAHDVELRGVAVEELADPTFRGSVMVKDETRCIRCGLCAMRCPVNEITM
                     EAFHFKSAENTGLIPIQSFDLRSNK"
     gene            2788..3291
                     /locus_tag="VE783_05005"
     CDS             2788..3291
                     /locus_tag="VE783_05005"
                     /inference="COORDINATES: protein motif:HMM:NF012575.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Rieske 2Fe-2S domain-containing protein"
                     /protein_id="HYX52787.1"
                     /translation="MSDETKAANAAVPDDDCKDCTRREFFAKLGIGSLIVAGAGTGLF
                     SYEYFSPNVLFEASPIIRAGKPDQFPANSVTLDAQSGIYLVNGPKGFYALGAICTHLG
                     CLTAWKPELDLIACPCHGSRFNKEGVKVAGPAPQPLPRLKVWLSEEGYLMVDRSSPLK
                     EQEFVKV"
     gene            3295..4038
                     /locus_tag="VE783_05010"
     CDS             3295..4038
                     /locus_tag="VE783_05010"
                     /inference="COORDINATES: protein motif:HMM:NF012263.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome b N-terminal domain-containing
                     protein"
                     /protein_id="HYX52788.1"
                     /translation="MPTMIQDEIERVRNSEVWRTIFRSGTGSSNLHRSQAVQQNVFLH
                     LFSAKIRSRALEFGPTWFLGALTLSTFFILVATGILLMFYYHPSVPQAYTDMKDLQFV
                     VASGVFLRNLHRWSAHAMVFLVFAHMFKVFYRGAYRPPRQFNWVIGVVLLLITLLLSY
                     TGYLLPWDQLAFWAVTVGSNIAKAVPVMGQKIRFLMLGGNEVNANALLRFYVLHCVIL
                     PLTAVALIGVHFWRIRKDGGLYVPEEKQP"
     gene            4035..4742
                     /locus_tag="VE783_05015"
     CDS             4035..4742
                     /locus_tag="VE783_05015"
                     /inference="COORDINATES: protein motif:HMM:NF012262.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52789.1"
                     /translation="MSEGVKMQAEIQPDVRKNPRRIAFILRRTSPQVRTQEEPRVMTY
                     PGALARFIIALEVAFLLLVWISLVANAPLEGIADPMHTPNPAKAPWYFLGLQELLHYF
                     PPVVAGVLIPGLVVGALIVIPYFNVNIEGEALWARDRKRRLNIVAAVIVVFSIFLVFY
                     DVWVALVPTLIVGGLMLLSAKYAKGPASDFQKRLAAKSLPFWIMTWFLVELFVLTAIG
                     TFFRGPGWAWVWPWQSY"
     gene            4761..6803
                     /locus_tag="VE783_05020"
     CDS             4761..6803
                     /locus_tag="VE783_05020"
                     /inference="COORDINATES: protein motif:HMM:NF012264.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HYX52790.1"
                     /translation="MTDNEKQRRQLRSRPTLRELITFGVVSLALFISLAIAPAKNYFS
                     DWRHYQKSYLSLAGQRQSGTLVRSFHTGIRQIWVPKLNVVDRCQSCHVNLDGALVGAT
                     QQPFRKHPAIPHQLDQFGCVFCHRGQGAATSVEEAHYTTEAWEQPLLPARYLESGCGQ
                     CHLGNVQGAPRLNDGRKLLATMGCVHCHNVTQPDGTQLQPDDDPPPLLHIAEKTSREW
                     IYAWIKNPQAYAATATMPNFQLSDQDAADISAFLIAQSTPSPASRVAVKAASGTPDLT
                     QAATVYGSSFCASCHAVQNEAGNLVGGNFGPELTRVGSKVNADWLRRWLNNPSNYEAT
                     TRMPHYRFDDKQIAMLTGFLLNKKDNDLLANVHLAASDGDSVVRGKRLVTESGCATCH
                     QINGVAPPQNFAPDLTRVGSRALAQVVFAPGMKHNLPDYVDAKIRNPRSFGPGLKMPK
                     FTLTDAQVDSLTTALLAQSDRAATMPKELMVAGGHESNYHPGGDAGRLMEDLHCQSCH
                     MINGHGGDMAPDLSAEGSSVQRAWLLEFLNNPNTLRPALIRRMPKFNLSKTEINTLSD
                     YILSAYQAPGLDSQTIDSKSLGADAAAHGKQLFYSRFGCNSCHIADFKIDKGYVGPAL
                     SGVGNRLTPAWTYKWLKDPNALRPGTLMPNFALKDDEARDLTAFLMTLKAKQGGGK"
     gene            6800..7516
                     /locus_tag="VE783_05025"
     CDS             6800..7516
                     /locus_tag="VE783_05025"
                     /inference="COORDINATES: protein motif:HMM:NF012264.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HYX52791.1"
                     /translation="MKHSLVTIIVCAAIFSGCKHAEKQTVHATAYGAAVTEVSGSKQV
                     GQVGSTLPQPVVVQVNGADGNPVTGALVRFRGQGLQFTPAEALSDASGQVTTNVQLGF
                     ENGDYQIVADSPKQDGTANSLTMRETALGYEQTLGKQVNDIYCIRCHDSESTPERVSN
                     LDNLSPAPHQFSDGATLNRISDTDLLNMITRGGPALGKSPQMPGYASTLKPAEIKAVL
                     AYMRAVADPPYQSPGVKYGK"
     gene            7506..8813
                     /locus_tag="VE783_05030"
     CDS             7506..8813
                     /locus_tag="VE783_05030"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52792.1"
                     /translation="MASKFAMKTLILAAGLFAAHAAAQVLPIAKVTDPASRVRQRQYM
                     PVLEQIVADAKGLHFAYPFYFSQALDVDEPRQKLLPQGSIHFDNFNGQSVLAITGNYY
                     ISYPSEAMNHNQRARRTYEDVVLPLLKIEVARLDRSIAIDAFAFEIAHHVRGKAMKVY
                     TEGPENLTMVIPRAIAERLVKAADLDARQGALLESEVFLNGEPLTLWLSGEDAPEDVR
                     DHYLARHERRKAKQQDGETSPASQTYEPGTLVSAKLIPQSELAAKIREGGSVHRDVSP
                     AELEKLQTRYTTEVRKLTTDLSGAAHFVDYAPPSFISFRDGAYLQLSVNTQLEQPAGS
                     SQYRMAALAFDNHISHLLRPVSRSFHGDPQFQGVNFSTTVHAPDQNATESVEFVVPFT
                     ALACYERYDCTGQELINRSVILINGERAELNLMQAEADPLPKP"
     gene            8891..10024
                     /gene="wecB"
                     /locus_tag="VE783_05035"
     CDS             8891..10024
                     /gene="wecB"
                     /locus_tag="VE783_05035"
                     /EC_number="5.1.3.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003772284.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008761 - UDP-N-acetylglucosamine
                     2-epimerase activity [Evidence IEA];
                     GO_process: GO:0009103 - lipopolysaccharide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine 2-epimerase
                     (non-hydrolyzing)"
                     /protein_id="HYX52793.1"
                     /translation="MKFSRILITFGTRPEAIKMAPLIQELRRHPEFEMKVCVTAQHRE
                     MLDHVLQVFDIKPDFDLDLMKPNQQLADLTADVLRGVRDLCRQWRPDLLFVQGDTTTT
                     FAASLAAFYEKIAVAHVEAGLRTHNRFAPWPEEINRRLTTVLAEVHYPPTEAARQNLL
                     ADGVPGNSIVVTGNTVIDALLSIVERLKHEPALNASFEKRFAFLGPKRRMILVTGHRR
                     ENFGEGFQGICRGLRRLAQRPDVEIVYPVHLNPNVRRPVNEILGGVQNVHLLEPLDYL
                     PFTWLMHRSYLILTDSGGIQEEAPSLAKPTLVMRETTERPEAIEAGTALLVGTDPNKI
                     VAEATRLLDSRHDYEKMARVSNPFGSGDAARRIVDHLLTLRRD"
     gene            10139..10309
                     /locus_tag="VE783_05040"
     CDS             10139..10309
                     /locus_tag="VE783_05040"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52794.1"
                     /translation="MPRKKKKKTFTATKAVKAMSRNAIGTVPPVRREESTRRVKKEKH
                     KPTIGRLLSESD"
     gene            complement(10333..10902)
                     /locus_tag="VE783_05045"
     CDS             complement(10333..10902)
                     /locus_tag="VE783_05045"
                     /inference="COORDINATES: protein motif:HMM:NF014069.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD domain-containing protein"
                     /protein_id="HYX52795.1"
                     /translation="MIDRQSAWNLVCEYTQSESLRKHMLAVEACMRAYARKFGEDEEK
                     WAITGLLHDFDYEKYPTPQEHPFIGNKILEERGYPEEIRRAILSHADYSGVKRESKME
                     KVLYACDELAGFITASALVKPNKSLAECEAKSIRKKMKDKAFARSVNRDDIINGAADL
                     GVDMEEHIAFCIEAMKSIAGELGLAGTIA"
     gene            11219..11614
                     /locus_tag="VE783_05050"
     CDS             11219..11614
                     /locus_tag="VE783_05050"
                     /inference="COORDINATES: protein motif:HMM:NF024252.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HYX52796.1"
                     /translation="MEQAPAMEAPSSHSGHLQIAAAIRNLRQRSGLSQRQLALRMQVP
                     RTYVSKIENEKAVPTLSSLQRLATALEVSVGDLLKGCSRTLDDEISSLMEDSFIAELV
                     PLLNGLDQMQRSSLLTQMRELSIRPRRSA"
     gene            11761..12165
                     /locus_tag="VE783_05055"
     CDS             11761..12165
                     /locus_tag="VE783_05055"
                     /inference="COORDINATES: protein motif:HMM:NF024245.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-hairpin-helix domain-containing protein"
                     /protein_id="HYX52797.1"
                     /translation="MRNLYLAIFLLVAFVAGCTSNQSPDTTRKDAADATAKLREESKQ
                     AGAEIKKGAQQAAVDAKAIAQGAREGWKSGDKVNVNSASQQQLMQLPGVDQDSAQRII
                     QSRPYHTTEELETRSVVSEDVYSRIKDKVAVR"
     gene            complement(12202..12540)
                     /locus_tag="VE783_05060"
     CDS             complement(12202..12540)
                     /locus_tag="VE783_05060"
                     /inference="COORDINATES: protein motif:HMM:TIGR00377.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043856 - anti-sigma factor antagonist
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="STAS domain-containing protein"
                     /protein_id="HYX52798.1"
                     /translation="MKASNRQVNGVTVVDMSGRITLGEGSVILRDTVRDLLSKGNKKI
                     LLNLGDVTYIDSSGIGELVSAFTSVRNQGGELKLLNLTKKVHDLLQITKLYTVFDIKD
                     DEAAAIAAYK"
     gene            complement(12543..12986)
                     /locus_tag="VE783_05065"
     CDS             complement(12543..12986)
                     /locus_tag="VE783_05065"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: protein motif:HMM:NF024970.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HYX52799.1"
                     /translation="MTKRVSYTLESTLDSVNKAESTALEAAAGAGFSEDEQYSISMAV
                     REACVNAVLHGNAYDPGKKVTLAYETTGDALIITVADQGEGLDPRNIPDPLSPENLMK
                     GSGRGIFLIRAFMDEVKFRNVHPGTEITLIKHVGRTAADTKEESQ"
     gene            complement(13158..14147)
                     /locus_tag="VE783_05070"
     CDS             complement(13158..14147)
                     /locus_tag="VE783_05070"
                     /inference="COORDINATES: protein motif:HMM:NF018884.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016791 - phosphatase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SpoIIE family protein phosphatase"
                     /protein_id="HYX52800.1"
                     /translation="MAVQVTDFHLLRDQLLVRRQKLEAALAKQETAQMVQLLDQVDRA
                     LERAEAGTYGTCEVCHDTVEPDRLLADPLTRVCLGCLAPDEARALENDLELAAQIQTG
                     LLPKKDLTVAGWKVAYHYQPAGAVSGDYLDVVAHGDELYFMLGDVSGKGVAASMLMAN
                     LHAMFRVLIPTGLSLPHIVERANRIFCESTLPTQYATLVVGRASACGKVEICNGGHLA
                     PFHIGRDKLHSFECSTVPIGLFSDQQFSSSTYSFSPGESLVLYTDGLTESLGHDGTEY
                     GAHRLGKVLERCVERSHHELLQDCVDDVLKFRADPRQMDDQTLMVLQFAPMTH"
     gene            14326..15573
                     /locus_tag="VE783_05075"
     CDS             14326..15573
                     /locus_tag="VE783_05075"
                     /inference="COORDINATES: protein motif:HMM:NF015413.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CBS domain-containing protein"
                     /protein_id="HYX52801.1"
                     /translation="MMQPVALSRILGAPVYDETGGVAGRVREVAISPKDDPNRISDLV
                     VKTSDGDRLLPAGLVKLVNASSVQATGKADQWPPLASSEGMLLLERDLLDQQIIDVSG
                     RKVVRVNDVDLLPEGVNGGTKLKISTVDIGLRGAIRRLLKGLAPNAAIEALASRMPAR
                     VIPWEAVDLIETDPARRVHLKLEYERLSKLHPADIADILEDLAPAERGAVFESLDDEV
                     AADALEEIDPEIQVELMRSIDPEQAADIVEEMNPDAAADLLGDLPQETSEEILEEMEP
                     EEREEVSELLEYEENTAAGRMTTDYLALGPDASVGDAIDKLREFEGDAETINTIFLVD
                     PEHKLVGAVPLVSLVVAPAGTRLSTLAPDHFVSCKAETSEPDLAEMFDKYNLMTLPVV
                     DDHQHLTGVITADDVISLLRNRL"
     gene            16642..>18810
                     /locus_tag="VE783_05080"
     CDS             16642..>18810
                     /locus_tag="VE783_05080"
                     /inference="COORDINATES: protein motif:HMM:NF012700.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MutS2/Smr-associated SH3 domain-containing
                     protein"
                     /protein_id="HYX52802.1"
                     /translation="MVPQPLQHASARVLEFDQFRDLISAYVSSPLGKAGVAALTPSAD
                     RDWIAHQQQLAAETRRFITAGGRMEFTGLFDAGQLLAKSKIRGAGLELEQIRDIVHVA
                     DKAAEWREMALHPPEAVLRENAWQGMHALTLQIADFTDLLRYFRNKILPDGTLDDRAS
                     SELGRIRREIEKQKRSIQDSLRGYLRRLAEGGAVQDELVTIRGERFVIPVKTEQRRRV
                     NGVVHGASSSGQTVFIEPLETIEQNNDLVRLLEEEQAEVRRILQEMTNRLGEQADAIA
                     VATEVMAEIELQFGKARFGIDYDCVRPELTDDYIELRDARHPLLERNLRPKGAKVVPL
                     TLEMDSAHRQLIISGPNTGGKTVGLKTVGLLALMAQAGVPVPATTAKLPVFDAALADI
                     GDYQSIEQNLSTFSAHVTNIDFISRTATQHSLVLLDELGSATDPEEGAALAVAIAEHF
                     RRIGAVTVISTHHTSLKVYAANTSGVLNAAVGFDEKTLQPTYELQVGVPGASAGINIA
                     HRLGLNPQITEAARAKLGTQTQDISRFLDKLHKDLRELEQERRRAQTREEELGRELKR
                     LEAEGAQEQRQKTREFERKLESLIRDFEYQVREAVNAVQDRAAAQKLSKQAEQRIARL
                     RREFKEQFDASVVAHKTGADRDDPNARPHEVKHISEGDTVKLKSLGRTAVVKRKLDEN
                     TFEVEMGAMKMKIPRHDIAEVFAPASTGASPVAAARAKGIT"
BASE COUNT         3937 a         5834 c         5264 g         3775 t
ORIGIN      
        1 cacccgcaac cggttcacgc cgcgcatgca gtgcctcatt cacgcgaata tcaaagcgtc
       61 gtttgagtac cagatacggc cgcagcagtt tgtcacagtc gtaaccaacc ccatcaccgg
      121 cgctcccgca gcgttgaacc cgttccgcac caacacggtt gtggtcgcgc tggagtacgt
      181 gttctaaagc tccaacagag gataaacatg aaatcaaaat acctattcat agtcgtcgcg
      241 ctggtgctga tagcccaggc atgttttgcc ggttcggtaa aaggcaaagt cgcgcccgga
      301 aaatcagtgg tctatctcga agccgcggcg ccccagatgg ctgaaaagac cgtgaccatg
      361 gaccagaagg gtcttctctt tcagcctcac gtgatggtca tccagaccgg aaccacagtt
      421 gagttcctga acagtgacaa ggtgcagcat aacgtcttct ggcccaacgt ctctggcgac
      481 aagaagaaaa gccacaacat gggcacgtgg ccgcagggac agaagaagcc atttaagttc
      541 accgaacccg gcgtggtcac gttactttgc aacgtgcatc cggaaatggc cggctacatc
      601 attgtttcgc ccacgccctt ctttgcggaa accagcgccg acggcgaata cgatctggcc
      661 aacgtccctg acggccagta caccatcacc gcctggcacg aaggcaagaa aatccagtcg
      721 aaaaagatca ccgtcagcgg taatacgact gctgacttca cattgcaata aaaaccggca
      781 gacggcggga tggctacggc catcctgccc tgctcaacca gagagactgc agagcgcccc
      841 catgcagaaa cgatttctga ataaaacggt tgatcgcgac tggctgaaca cgaactttcc
      901 ctgcatgatg gcctgtccgg cgcacaccaa tgccgggcgg tacgtttcgc tgattgcgga
      961 aggaagattc gaagaggctt accggttcgc ccgcgatccc aacccgctgg ccagcatctg
     1021 cggccgcgtc tgcgcgcatc cctgtgagac cgcctgccgt cgcggcgaga ttgaccgccc
     1081 aatccagatt cgcgcactca agcggtttct caccgagcgc tacggacccg agtcgagaaa
     1141 ttccaccgcg cccagcactc aggcgcagcc gccgatcaac aagaaagttg ccgtcattgg
     1201 cgccggtccg gtggggcttt ctgccgcaca tgatcttgcg ctgatgggct attcggtcac
     1261 aatctttgaa gccgcagcgg tgcccggcgg catgttgtac ctggggattc ctgaatatcg
     1321 cctgccgcgc gatgttgtgg aagcgcaggt acgcgaaatc ctgaacaccg gcgatgtgac
     1381 cctgagactc aaccagagag ccgggaaaga tttttccatt gaagacctgc ggtcgcaggg
     1441 ttttgacgcg gtgctggcag ccgtgggagc ccaccgcagt cgtgacctca gcatccccgg
     1501 cgttgacctg gacggagtcc acaagggaat cgacttcttg ctgaacgtga accttggata
     1561 ccagttcacc atcggcaaaa aggttgtggt gatcggcggg ggcaacgtcg ccatggacgt
     1621 ggcgcgctcc gcagcccgag aagttgtgcg gcagcacgag atcccgaccg atgactggac
     1681 caaaaacgtg gaagccgtgg cgtcacatga aatggtggac atctcgcttt cggcgttgcg
     1741 catgggagcg agcgaagtcc acatcgtctg cattgaacgg cgggatgaga tgccggcagc
     1801 gctcgaggaa atcgaagaag ccgaaactga aggtgtcacc atccatgccg gcttcggacc
     1861 gaaccgggtg atcgggctca acggccgtgt ctccgcactg gagaccgtgc gcaccagccg
     1921 cgtctttgac gagaacggac gtttcaaccc ccagtttcag cagggcagtg aaacgctggt
     1981 ggaatgcgac acggtcattc tcgccattgg ccaggcgccc aacctcgatt tcctgggcca
     2041 ggaaagcaag atcaagatct cgccgcgcgg gctgatcgaa gtggaccggc gcaacctcat
     2101 gacctccgtt ccgggaattt ttgccggcgg tgattgcgtc ttcggccctc gcctgattat
     2161 tgacagcgtt gctgacggga agcgcgctgc tgccggtatc gacgaatttc tgcgcggcca
     2221 ccaacaggcc gatcccgtga tcgagattga agtgctgaat cgtcatcaga tgatcaccaa
     2281 ttacatggag atcgcccgtc actccgtacc catgctgccg ctggagcggc gcaccggcat
     2341 gaccgaagtg gaagttggct ttgatgagaa gaccgccgtg gaagaggcac agcgctgcct
     2401 ccgatgctgg atcaacacgg tctttgaagg cacggaagtt gacggaacag agtgcattct
     2461 ctgcggcggc tgtgtggatg tctgtccgga acagtgcctg gaattggttc cgctggacca
     2521 gttcgacttc cccgagccgg tgctttcgta tcttcgtgac aacgaagccg cgcacgatgt
     2581 tgagttgcgc ggtgtcgccg tcgaggaact tgccgacccg actttccggg ggtcagtcat
     2641 ggtcaaggac gagacgcgct gcatccgttg cggtctgtgc gccatgcgct gccccgtgaa
     2701 cgagatcact atggaagcgt tccatttcaa gtcagccgag aacaccggcc tgatcccgat
     2761 ccagtctttt gatctgagga gcaataaatg agtgatgaaa ccaaagccgc gaacgcggca
     2821 gtgcccgacg atgattgcaa agactgcacg cggcgcgagt tctttgccaa gctcggcatc
     2881 gggtcgctga ttgtggcggg cgcaggaacc gggttgttct cttacgagta tttctcgccc
     2941 aacgtgttgt ttgaagcgtc gcccatcatc cgggcaggga agcctgacca gtttcccgcc
     3001 aactccgtca cgcttgacgc gcaaagcggc atttatctgg tgaacggacc caaaggcttt
     3061 tacgcactcg gcgccatctg tacgcacctg ggctgcctca cggcatggaa gcccgagctt
     3121 gatctcattg cctgcccatg tcatggcagc cgattcaata aagagggcgt gaaggtggcc
     3181 ggtccagcgc cgcaaccgct gcctcggctc aaagtatggc tgagtgaaga aggctacctg
     3241 atggtggacc gctccagccc gcttaaagag caggaattcg tgaaggtata agccatgcca
     3301 accatgattc aggacgaaat cgaacgggtt cgcaacagcg aggtctggcg aaccattttc
     3361 cgcagcggca ccggatcgag caatctccat cgctcccagg cggtgcagca gaacgtcttc
     3421 cttcacctgt tctcggccaa gatccgctcg cgcgccctgg agttcggccc cacctggttt
     3481 ctcggcgccc tgacgctcag caccttcttc attctggtag cgaccggcat cctgctgatg
     3541 ttctattacc atccatcggt cccgcaggcc tacaccgata tgaaggacct gcagtttgtg
     3601 gtggcttccg gggtttttct ccgcaacctg catcgctggt cggcgcacgc catggtcttt
     3661 ctggtcttcg ctcacatgtt caaggtgttc tatcgcggag cataccgtcc gccgcgacag
     3721 ttcaattggg tgatcggtgt cgtcctgctg ctgatcacgc tgctgctcag ctacaccgga
     3781 tatctgctgc cctgggacca actcgcattc tgggcggtta ccgtgggctc caacattgcg
     3841 aaggctgtcc cggttatggg acagaagatt cgcttcctga tgctgggcgg caatgaggtg
     3901 aatgcgaacg cgctgttgag gttctacgtt ctgcactgcg tgatccttcc gttgaccgcg
     3961 gtcgcgctga tcggcgtgca tttctggcgc atccgcaaag atggcggcct gtacgtgccg
     4021 gaggagaagc agccatgagt gaaggcgtaa aaatgcaggc ggaaatccag cctgacgttc
     4081 gcaaaaatcc gcgacgcatc gcttttattc tgcgccgcac ctctccgcag gtaaggacac
     4141 aggaagagcc gcgggtgatg acttatcccg gggcccttgc gcggttcatc atcgcgctgg
     4201 aagttgcgtt cctgctgctg gtgtggatat cgctggtcgc gaatgctccg ctcgaaggca
     4261 ttgccgatcc aatgcacacc ccgaatccgg ccaaagcgcc gtggtacttc ctgggactgc
     4321 aggaactact gcactacttc ccgccagtgg ttgcgggcgt gctgatacct ggactggtgg
     4381 taggggcgct cattgtgatt ccgtacttca acgtgaacat tgaaggcgag gcactgtggg
     4441 cgcgcgaccg caagcgccgc ctcaatatcg ttgcggccgt gatcgtggtc ttcagtattt
     4501 ttctcgtgtt ctacgacgtg tgggtcgcgc tggttcccac gctgatcgtc ggcggcctca
     4561 tgctgctttc ggcgaagtac gcaaaaggtc cggcaagcga ttttcagaaa cgccttgcgg
     4621 caaaatcgct gcccttctgg atcatgacct ggttcctggt ggagctgttc gttctcaccg
     4681 cgataggaac cttcttccgc ggcccgggat gggcgtgggt ctggccatgg cagagctact
     4741 aaggagacgg aggagctaac ttgactgaca acgaaaagca acgccgtcaa ttgcgcagcc
     4801 ggccaacact gcgcgaactc atcaccttcg gtgtggtgag cctggcgctg ttcatctcgc
     4861 tggccattgc cccggcaaaa aattacttca gtgactggcg tcattatcaa aagtcttatc
     4921 tcagccttgc cgggcagcgg cagagcggga ccctggtgcg cagttttcac acgggcatcc
     4981 gccagatctg ggtaccaaag ctgaatgtgg tggaccgttg ccagagctgc cacgtcaatc
     5041 ttgatggcgc attggtcggc gccacgcagc agcccttccg aaaacatccg gcgattccgc
     5101 atcagcttga tcagttcggc tgcgtgttct gccatcgcgg ccagggcgct gcaacttcag
     5161 tggaagaagc gcactacact acagaagcgt gggagcagcc gttgctgccc gcacgatatc
     5221 tcgaatccgg ctgcgggcag tgccatctcg gcaatgttca aggcgcgcct cgcttgaatg
     5281 acggccgcaa actcctcgct accatgggct gcgtacattg ccataacgtg acccagcctg
     5341 acggaacgca gcttcagccg gatgatgacc cgccgccgct gctccacatc gcggaaaaga
     5401 ccagccgcga gtggatttac gcctggatca aaaatcctca ggcctatgcc gccaccgcaa
     5461 ccatgccaaa cttccagctc agcgatcaag acgcggctga catctcggcc ttcctgattg
     5521 cgcagagcac tccgtctcct gcatcgcgag tagcggtcaa ggcggcgagc gggactcctg
     5581 atctcacgca ggctgccacc gtgtacggca gttcgttctg cgcgtcatgt cacgcggtac
     5641 aaaacgaggc cggtaatctg gtgggcggca actttggacc ggagctcacg cgcgtcggca
     5701 gcaaggtaaa cgcggactgg ctgcgtcgct ggctcaataa tccttctaat tatgaagcca
     5761 caacgcgcat gccgcattat cgcttcgacg acaagcagat cgcgatgctc accggcttcc
     5821 tgctgaacaa gaaagacaat gacctgctcg cgaacgtgca ccttgcggcc tccgatggtg
     5881 acagcgttgt gcgcggtaag cggctggtca ccgagagcgg ttgcgctacc tgccatcaga
     5941 tcaatggcgt ggctccgcca cagaactttg cgccagacct cacgcgtgta ggcagccgag
     6001 cactggcaca ggtcgtcttt gctcccggca tgaaacataa tttgccggac tacgtcgacg
     6061 ccaagattcg taacccgcgg tcgtttggcc cggggttgaa gatgccgaag ttcacgctga
     6121 cggacgcgca ggtggattcg ctcaccacgg cgctgctcgc ccagagtgac cgtgcagcca
     6181 ccatgcccaa agaactgatg gtcgcaggtg gccacgaatc aaactatcat cccggtggcg
     6241 atgccggccg gttgatggaa gacctgcact gccagagctg ccacatgatc aacggccacg
     6301 gcggcgacat ggcgcccgac ctcagcgcgg aaggcagctc agtgcagcgc gcgtggctgc
     6361 tggagttcct gaacaacccg aacacgctgc ggcccgcgct catccggcgc atgccgaaat
     6421 tcaacctgag caaaacggag atcaacacgc tgtctgacta cattctttcc gcgtatcagg
     6481 ctccggggct ggattcgcag acgatcgatt ccaaatcgct gggcgccgat gcggctgcac
     6541 acggcaagca gcttttctat tcacgcttcg gctgcaatag ctgccacatt gccgacttca
     6601 agattgataa aggctatgtg ggcccggcgc tgagcggagt cggaaaccgg ctcacgccgg
     6661 cgtggactta caaatggctg aaagacccga atgctttgcg tcccggaacg ctgatgccga
     6721 acttcgccct gaaagacgac gaagcccgag accttacggc gttcctcatg acgttaaaag
     6781 cgaagcaggg aggcgggaaa tgaagcactc tctcgtaacc atcatcgttt gtgcggcaat
     6841 cttctcaggc tgcaaacacg cggagaagca gaccgtgcac gcaacggcgt acggcgcagc
     6901 cgttacggaa gtgagcggca gcaaacaggt gggacaggtc gggtctacgc tgccgcaacc
     6961 tgtggtggtg caggtcaacg gagctgacgg taatccggtt accggagcgc tggtccgttt
     7021 tcgcggccaa ggcttgcaat tcactcccgc ggaagcgctc tctgatgcca gcggccaggt
     7081 gactaccaat gtgcaactag gtttcgaaaa tggcgattac cagatcgttg ctgacagccc
     7141 gaaacaggac ggaaccgcca actctctcac tatgcgcgag accgctctgg gttacgagca
     7201 gacgctcggg aagcaggtga acgatatcta ctgcatccgc tgccatgact cggagtcgac
     7261 tccggagcgc gtctccaacc tggacaatct ctccccggcg ccgcaccagt tcagtgacgg
     7321 cgcaacactc aatcgcatct ctgataccga tttgctgaac atgatcacgc gcggcggccc
     7381 cgcgctgggc aagtcgccgc agatgcccgg ttacgcctcc acgctaaagc cggcagagat
     7441 caaagctgtg cttgcttata tgcgcgcggt ggctgatcca ccctaccaat cccctggagt
     7501 gaaatatggc aagtaaattt gcaatgaaga cactcattct cgcagcaggc ctcttcgcag
     7561 ctcacgcagc ggcgcaggtc ttacccatag caaaggtcac cgatcctgct tcgcgcgtcc
     7621 gacagcggca atacatgccg gtgctggaac agattgtggc tgacgccaag ggcctgcatt
     7681 ttgcctatcc gttttacttc agccaggcgt tggacgttga cgagcctcgc cagaagctgc
     7741 tgccgcaggg ctccatccat ttcgataact tcaacggcca gagcgtgctg gccatcaccg
     7801 gcaactatta catctcctac ccgtcggaag ccatgaacca caaccagcgg gcccgccgca
     7861 cctatgaaga cgttgtgctg ccgctgttga agatcgaagt tgcgcgcctg gaccgaagca
     7921 tcgccatcga tgcattcgcc tttgaaatag cccaccacgt gcgcggcaaa gccatgaagg
     7981 tttacaccga gggtccggaa aatctcacca tggtaatccc gcgcgccatc gcggagcgcc
     8041 tggtaaaggc cgctgacctc gatgcccgcc agggtgctct gctggaaagt gaagtcttcc
     8101 tcaatggcga gcctcttacg ctgtggctca gcggtgaaga tgcgccagag gacgtgcgcg
     8161 atcactatct tgcccggcac gaacgccgca aagccaagca acaggatggc gagacctcac
     8221 cggcgtctca aacctatgag ccggggaccc tcgtcagcgc caaactaatc ccacagtctg
     8281 agttggccgc gaaaattcgc gaaggcggaa gtgtccatcg cgacgtctca cccgccgagc
     8341 ttgaaaaact gcagaccaga tacaccacgg aagttaggaa gctaaccaca gacctctccg
     8401 gcgcggcgca cttcgtcgac tatgctccgc cgtcattcat ctccttccgt gacggggcct
     8461 atctacagct tagtgtgaac acccagctcg agcagccggc gggatcatca cagtaccgca
     8521 tggccgcgtt ggcattcgat aaccacatct cgcacttgtt gcgtccagtg tcgaggtcct
     8581 ttcacggcga cccgcaattt caaggcgtca atttcagcac cacggtccac gcgcccgacc
     8641 aaaacgccac cgagtcagtg gagttcgttg tacccttcac ggcgctggcc tgctatgaaa
     8701 ggtatgactg caccggccag gaactcatca accgcagcgt gatactcatc aacggcgagc
     8761 gcgcggagct gaacctgatg caggccgaag cagacccgct gcccaagccg tagtcgccgg
     8821 gggggagatg tttcgcggtt catgtagaat cggaaaaccg caggcatctc ccaccggagc
     8881 gatctaaaag ttgaagttct cgcgcatcct catcaccttt ggcacgcggc cggaagccat
     8941 caagatggcg cccttgatcc aggagctgcg caggcaccct gagttcgaga tgaaagtctg
     9001 cgtcacggcc cagcaccgcg agatgcttga ccacgtgctt caggtctttg acatcaagcc
     9061 tgatttcgac ctggacctga tgaagccgaa ccagcagctc gcggacctca cggccgacgt
     9121 gctgcgcggg gtgcgcgacc tgtgccggca atggcgtccc gatctcctct tcgttcaggg
     9181 cgataccacc acgactttcg ctgccagcct tgcagctttt tacgagaaga tcgcggtagc
     9241 gcacgtggaa gcaggcctgc gcacgcacaa tcgttttgct ccctggccgg aggagatcaa
     9301 tcggcgcctc acgacagttc ttgccgaggt gcattaccca cccacggaag ctgcccggca
     9361 aaatcttcta gccgatggcg tgcccgggaa ctccatcgtc gtcacgggca acacagtgat
     9421 tgacgcgcta ctgagcatcg tcgaacggct gaaacatgaa cccgcactga acgcgagctt
     9481 cgaaaagcgg ttcgcgtttc tcggtccgaa gcgccgcatg attctggtta cgggccatcg
     9541 ccgtgagaat tttggcgaag gctttcaggg gatctgccgc gggctccgcc ggctcgcgca
     9601 gcgcccggat gttgagatcg tttatcccgt tcacctcaac ccaaatgtcc gtcggccggt
     9661 aaatgagatt ctgggtggcg tgcagaacgt ccacctgctg gagccgctcg actacctgcc
     9721 gttcacctgg ctcatgcacc ggtcttactt gatcctgacc gactctggcg gaatccagga
     9781 agaagcgccg tcgcttgcca aacccacgct ggtgatgcgc gagaccactg agcgtcctga
     9841 agccatcgaa gccggaaccg cgctgctggt cggcaccgac ccgaacaaaa ttgtggcgga
     9901 agccactcgg ctgctcgatt cccgccacga ctatgaaaag atggcccgcg tcagcaatcc
     9961 cttcgggagc ggcgatgctg cacggcgcat tgtcgaccat ctgttaacgc ttcgccgaga
    10021 ttagcggatt ccgaccatct catgtagaac cgctgatcac gttggcgctg agcttactaa
    10081 catctgatgg atgaatcctg ctggtttcgc atcctttgtt ggttaaaatc tttctgcaat
    10141 gccgcgcaag aagaaaaaaa agaccttcac tgccaccaaa gcggtgaaag cgatgtcgag
    10201 gaacgccata ggcaccgtgc cgcctgttcg ccgcgaagag agcacccgtc gcgtgaagaa
    10261 agagaaacac aagccaacca tcgggcggct gctttcagaa tcggactaga ctctgcaact
    10321 cgccgcggcc ttctaggcga ttgttcctgc caaccccaac tcgcctgcga tagacttcat
    10381 ggcttcgatg caaaacgcga tgtgttcttc catatccacg cccagatcgg ctgcgccatt
    10441 gatgatatcg tcgcgattca cgctgcgggc aaaggccttg tccttcatct ttttgcggat
    10501 cgatttggct tcgcattccg ccagtgactt gttgggcttg accagcgcgc ttgcggtgat
    10561 gaacccggcc agctcgtcgc aggcataaag cactttttcc attttgcttt ctcgtttcac
    10621 gccactatag tcggcatggg agaggatggc gcgcctgatt tcctccgggt atccgcgctc
    10681 ttcgagaatt ttgttgccaa tgaacggatg ctcctgcggc gtgggatact tttcgtaatc
    10741 gaagtcatgc agcagcccag tgatggccca cttttcttca tcctcgccaa acttgcgtgc
    10801 gtaggcgcgc atgcatgctt ccacggccag catgtgcttg cgcaggcttt ctgactgggt
    10861 gtattcgcag accaggttcc atgcagactg gcggtcgatc ataggctttt aaccgtgttt
    10921 ctccttatct tctctgttct atcaggcatt tctacctgtt tcaccgtaat ttttccgttg
    10981 acaagcaact ttccttcgat gaaactaccc taagttgtag gtagtaaaga gtaaaccgtt
    11041 tttggagttt tgcctgctct ggcactccga aacacctatg gcaacaacgc tggcaccggt
    11101 tgattcccgg gaagtagttc gttgcgacca ttgccatctc gtccagttcc ggacgactaa
    11161 taatctttgc agacgctgcc gcacatcgct tgatgaggac gagcctgagc ccatcctcgt
    11221 ggaacaagcg cccgcgatgg aagcgccgtc cagccactcc ggccatctcc agatcgcggc
    11281 tgctattcgc aacttgcggc agcgctccgg actcagtcag cgccagcttg ccttgcgtat
    11341 gcaggtgccg cgcacttacg tttcaaagat cgaaaacgaa aaggcggtgc caacactctc
    11401 ctcattgcag cggctggcga cagcacttga agtatcagtc ggcgacctgc tgaaaggctg
    11461 ttcgcgcacg ctggacgatg agatttcctc tctcatggaa gacagcttta tcgctgagct
    11521 ggttccattg ctaaacggcc tggaccagat gcaacggtcc agcctgctga cgcagatgcg
    11581 tgaactgagc atccggccga gacgaagcgc ctaagagccc cacatcagcc gccagtctgg
    11641 ccgaagccat ggtcgagctt ctgcgagagt ggcggctttt ctttttcccc gaacgcagca
    11701 tcaaatttat ccggccaact gtacagcgga aatcgtcact ccaactctct ggtgacgaac
    11761 atgcgtaacc tctacctagc catattcctt cttgtcgcat ttgttgcggg ctgcacctca
    11821 aatcagagcc ccgacacaac ccgcaaagat gccgccgacg ccacagccaa gctcagagaa
    11881 gaaagcaagc aggccggcgc ggaaatcaaa aaaggcgcgc agcaagccgc tgttgacgcc
    11941 aaagccatag cgcaaggagc acgggaaggc tggaagtccg gcgataaggt caatgtgaac
    12001 tcggccagcc agcagcagtt gatgcagctt cccggagtcg accaggattc agctcagcga
    12061 atcatccagt cacgcccgta tcacaccacg gaagaacttg agacgcgcag cgtggtttct
    12121 gaagacgttt acagccggat caaggacaaa gtagcagtgc ggtagcgggc aggcgggagg
    12181 acgcctgccc gaagaatccg tctatttgta agctgcgatg gctgccgcct cgtcgtcctt
    12241 gatgtcaaag acggtataaa gctttgtgat ctggagaaga tcgtggacct ttttcgtcag
    12301 gttaagcagt ttcagctcgc cgccctggtt gcggacggac gtaaacgcgc tcaccagctc
    12361 gccgatgcct gagctgtcaa tgtacgtgac gtctccgagg ttcaagagaa ttttcttgtt
    12421 ccccttgctc aacaggtcgc gcaccgtgtc gcgcaggatc acgctgcctt ctcccagcgt
    12481 gatgcggccg ctcatgtcca caacggtcac gccgttgacc tgccgattgc ttgccttcat
    12541 tgtcactgtg attcctcctt ggtatccgcc gctgtgcggc caacatgctt gatcagtgtg
    12601 atctcagtcc ctgggtgcac gttcctgaac ttcacttcat ccatgaatgc acgaatcaga
    12661 aaaatcccgc gtccggagcc tttcatcagg ttctccggag acagcggatc cggaatgttg
    12721 cggggatcca gtccctctcc ctggtctgct actgtgatga tcagggcatc cccggttgtt
    12781 tcatacgcca gcgtaacttt tttgccggga tcgtaagcgt ttccgtgcag caccgcattc
    12841 acgcaggcct cgcgcaccgc catgctgatg ctgtattgct cgtcttcact gaatcccgcg
    12901 cctgccgcag cttccagggc cgtactctca gccttgttga cgctgtccag agtggattcc
    12961 agcgtgtacg aaacccgttt tgtcatgcgg cgatccacaa tgtctattga gacggcgcga
    13021 acctggtcac ggcgggcgga atgcttagtt tgcctatcgg gagccgcgat tgtcaaaccg
    13081 agtagcatgc gcggccagcc acaccagcgc tcgttgaccg cgctcggttc gccggcacac
    13141 agccatttcg ggcggcttca atgcgtcatt ggcgcaaact gcagcaccat cagcgtttgg
    13201 tcgtccatct ggcgcgggtc ggctcggaac ttcagcacgt cgtccacgca gtcctgcagc
    13261 agctcgtgat gtgaccgctc aacgcaccgc tccagcacct tgcccagccg atgggcgccg
    13321 tactccgttc catcgtgccc cagtgattcg gttaatccgt ccgtgtaaag caccaggctt
    13381 tctcccggag agaagctgta ggtggaactt gagaactgct gatcactgaa aagcccaatc
    13441 ggcacagtgg aacactcaaa ggagtgcagc ttgtcgcggc caatatggaa cggcgccaga
    13501 tgaccgccgt tgcatatctc caccttgccg caggctgaag cgcgaccaac aaccagcgtg
    13561 gcatactgcg ttggcagcgt actctcgcaa aaaatccggt tcgccctctc cacgatatgc
    13621 ggcaggctca gcccggtcgg aatcaacacc cgaaacatcg cgtgcaggtt cgccatcagc
    13681 attgaggcgg ccacgccttt gccggatacg tcccccagca tgaagtaaag ctcatcaccg
    13741 tgcgctacca cgtcaagata gtccccgctg acggcgccgg caggctggta atggtaagcc
    13801 accttccatc ctgccaccgt aaggtccttc ttcggcagca gcccggtctg gatttgcgct
    13861 gccagttcca gatcattctc cagagctcgt gcctcgtcgg gagccaggca ccccaggcac
    13921 acccgggtca gaggatcggc tagcaggcga tcgggttcca ctgtgtcatg gcagacttcg
    13981 caggtgccat acgtgccggc ttcagcgcgc tccagcgccc ggtccacctg gtcaagcagc
    14041 tggaccatct gggcggtttc ctgcttcgcc agcgccgctt ccagtttctg ccggcggacc
    14101 agtagctggt cgcgcagtag atgaaaatcg gtgacctgaa ctgccatagc aaactcctct
    14161 caatcagaat ccctaaccgc gaggcaggat tcaaaacatt cgtgcctcat ttccgagcgt
    14221 aacaaccggg gttcagtgtt taccatccga ctcttgcgcc caaaagaacc agaatagtgt
    14281 ggcaagtaag caccacattc gttattctgc gaatggcgat gcaaaatgat gcaaccagtg
    14341 gcactttcgc gcattctggg cgcgccggtc tatgacgaga ccggcggcgt cgccggacgc
    14401 gtgcgtgaag tagccatctc ccccaaggac gatcccaacc gcatctctga cctggtggta
    14461 aaaacctcag acggcgatcg cctcctgcct gccggcctgg tcaagttggt caatgcctcg
    14521 tctgtgcagg ccaccggcaa ggccgaccag tggccgcctc ttgccagttc tgaaggcatg
    14581 ctcctgctcg aacgcgacct gctcgaccag cagatcattg acgtttctgg ccgcaaggtc
    14641 gtccgcgtga atgacgtgga cttgctgcct gaaggcgtaa acggcggcac caagctcaaa
    14701 atttctaccg tcgatatcgg ccttcgcggc gctatccggc ggctcctgaa agggctggct
    14761 cccaacgccg ccattgaggc tcttgccagc cgcatgcctg cccgcgtcat cccctgggaa
    14821 gccgtggacc tgattgaaac tgacccggcc cgccgcgtcc acctcaagct ggagtatgaa
    14881 cgcctctcca agctgcaccc ggccgatatt gccgatatcc tcgaagacct cgcgcccgct
    14941 gagcgtggcg ccgtcttcga gtcgctggac gatgaagtcg ccgcggatgc ccttgaggag
    15001 atcgatcctg aaatccaggt cgaactcatg cgctccatcg accccgaaca ggctgccgac
    15061 atcgtcgagg agatgaaccc ggacgctgca gccgaccttc tcggcgacct gccccaggaa
    15121 acctcggaag aaatcctgga ggaaatggag cccgaggagc gcgaagaagt ctccgaacta
    15181 cttgagtacg aagagaacac cgcggccggc cgcatgacca ccgattacct tgccctcggg
    15241 ccggatgcct cggtcggtga tgccattgac aagctccgcg aattcgaagg cgacgccgaa
    15301 accatcaaca ccatcttcct ggttgatccg gagcacaaac tcgtcggcgc ggttccgctc
    15361 gtctcgctgg tcgtggctcc agccggaacc aggctctcca ctctcgcccc ggatcacttc
    15421 gtctcttgca aggctgaaac cagcgagccc gacctggccg agatgttcga taagtacaac
    15481 ctcatgaccc tcccggtcgt ggacgaccac cagcacctca ccggcgtcat caccgctgac
    15541 gacgtcatca gcctgcttcg caatcgcctg tagcccctca tctcgcactc gcgacgttac
    15601 ttccaagtaa ctacgtgcag caggggtggg ggagtcatag ggtcaccccg aaaacaaagg
    15661 acttatcaac cagcactccg gggagcctgc cggaattttc ggcgagcctc ctgcacttct
    15721 cgcgcccctc cgatacgttc taggtttacc aatctgccaa tagatcgttg tgcggctaat
    15781 tgccaattac tacttgctat ttgcttattg tcaaagaccg gcgccgcttc cgcggcaaat
    15841 tcccctgagg aaatcaagcc agcgtactat tattttctct gccgaagcaa cagcgaaatt
    15901 ggccattgct cctcatcgtc ctaaaacccg caagtgatta caccctccga aattccactg
    15961 attgctgtca gatctttttt gatccgcgac accctgcctc ccataaccaa gcctttggtg
    16021 tccttccttg ttgtagcttt tctctacgag atctgcaggt tctgccctca aaatcgccac
    16081 attgttcatt ctcgtggcta ttccagaact gtttcccccc ccgaaggacc caccccgagc
    16141 gagtgcgagc cgagcctgcg agggtgagcg cgatactggg gcccccggaa atcccgattt
    16201 tggatttctg gggtggggcg aggggccggc tccgctgccg atgggcgtga gccacgattc
    16261 tcctcaggtt ttgtctcccc gcacagaaga tactggagct cagggcgtgt gattcgcgaa
    16321 atcccgatcc tgtcctttct cgtaaatgcg accgggagcc actaaggtcc gtcactcgcc
    16381 agagccgagc gccgcaggcg cgaaataatg cgagcccagt ccgtttccga ggcgagcgtg
    16441 agcgagctga ggaataaggg ccgggtaggc ctgcgcccga ttttggcgca ttggggtgga
    16501 gcgaagcgga gcgacaacaa aaagagacat cttcatcctc ttttgagagt tgcgccgttc
    16561 atttgcgact tctggttggg gattctcgct ccggcctctg cggggatccg ggcgtcctgt
    16621 ttgcgctaac atctcttaca gatggtcccg cagccgctcc aacacgcttc cgcccgagtc
    16681 ctggaatttg accagttccg tgacctgatt tccgcttacg tctcgtcgcc gctgggcaag
    16741 gctggcgtag ctgccctcac cccgtccgcc gatcgcgact ggatcgccca ccagcagcag
    16801 cttgccgctg agacccgccg ctttatcacc gccggcgggc gcatggagtt caccggcttg
    16861 tttgacgccg gtcaactcct cgccaagtca aaaatccgtg gcgccggcct ggagctggag
    16921 cagatccgcg acatcgtgca cgtggccgac aaggccgccg aatggcgtga aatggccctt
    16981 catccgcccg aggccgtcct gcgcgaaaac gcctggcagg gcatgcacgc gctcaccctg
    17041 caaatcgctg atttcactga cctgctgcgc tacttccgca acaagatcct gcccgatggc
    17101 actctcgacg accgcgcctc ctccgaactc ggccgcatcc ggcgcgagat cgaaaagcag
    17161 aagcgctcca tccaggactc cctccgcggc tacctgcgcc ggctcgccga aggcggagcc
    17221 gtccaggacg aacttgtcac catccgtggc gagcgcttcg tcatcccggt caaaaccgag
    17281 cagcgtcgcc gcgtcaatgg cgtcgtccac ggcgcttctt ccagcggtca gaccgtcttt
    17341 atcgagccgc tcgaaaccat cgagcagaac aacgatctgg ttcgcctgct tgaagaagaa
    17401 caggctgagg tccgccgcat cctgcaggaa atgactaacc ggctgggcga gcaggccgat
    17461 gccatcgccg tcgcaaccga agtcatggcg gaaatcgagc tccaattcgg caaagcgcgc
    17521 ttcggcattg actacgactg cgtccgtcct gaactgaccg acgactacat cgagctccgt
    17581 gatgcccgcc atccgctgct ggagcgtaat ctccgcccca aaggtgccaa ggtcgtcccg
    17641 ctcacgctgg aaatggactc cgctcaccgc cagctcatca tcagcggacc gaacaccggc
    17701 ggtaaaacag tcggcctgaa gactgttggt ctgctcgcgc tcatggcgca ggccggggtt
    17761 cccgtgccgg cgactactgc aaagctgccg gtttttgacg ccgcgctggc cgatataggt
    17821 gactaccagt ccatcgagca gaacctctcc actttctccg ctcacgtcac caacattgat
    17881 ttcatctcgc ggacggccac ccagcactcg ctcgtgctgc tcgacgagct cggctcggcc
    17941 acggatcccg aagaaggcgc ggccctcgcg gtcgccattg ccgagcattt ccgccgcata
    18001 ggcgctgtca cagtgatctc cacgcaccac acttcattga aagtttacgc tgcgaatacc
    18061 agtggcgtgc tcaacgctgc cgtaggattt gacgagaaga cgcttcaacc tacctatgag
    18121 ctacaagtcg gcgtgcccgg agcatcggcg ggcatcaaca tcgcccaccg gcttggcctc
    18181 aacccgcaaa tcacggaagc tgcgcgcgcc aaactcggca cgcagacgca ggacatctcc
    18241 cgcttcctcg acaagctgca caaagacctg cgcgaacttg agcaggagcg ccgccgcgcc
    18301 cagacgcgcg aagaagagtt gggccgcgaa ctcaagcgcc tggaggcgga aggcgcgcag
    18361 gagcagcggc agaagacccg tgagtttgag cgcaagctgg aatcccttat ccgcgatttt
    18421 gaatatcagg tgcgcgaggc agtcaatgcc gtccaggacc gcgccgccgc acagaagctc
    18481 tcaaagcagg ccgagcagcg catcgcgagg ctcaggcgcg aattcaagga gcaattcgac
    18541 gcctccgtgg tagcccataa gaccggcgca gatcgcgacg atcccaacgc gcgtccgcat
    18601 gaggtaaagc acatctcgga aggtgacacc gtcaagctca aatcgctggg ccgcaccgct
    18661 gtggtcaagc gcaagcttga tgagaacacc ttcgaagtcg aaatgggcgc catgaaaatg
    18721 aaaatccccc gtcacgacat cgccgaggtc tttgcgcccg ctagcaccgg agcgtcgccc
    18781 gttgccgccg cccgcgccaa aggcattact
//
LOCUS       DASQYP010000159         4290 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_222515, whole genome shotgun sequence.
ACCESSION   DASQYP010000159 DASQYP010000000
VERSION     DASQYP010000159.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 4290)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4290)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4290
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_222515"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1503)
                     /gene="lptC"
                     /locus_tag="VE783_05085"
     CDS             complement(<1..1503)
                     /gene="lptC"
                     /locus_tag="VE783_05085"
                     /inference="COORDINATES: protein motif:HMM:TIGR04409.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015221 - lipopolysaccharide transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015920 - lipopolysaccharide transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter periplasmic protein
                     LptC"
                     /protein_id="HYX52803.1"
                     /translation="MPVDPKILRRLFASGAVLAILVAAFFYLRGIIKTSRVTEKLPEN
                     IPANVERSGQGFTFSQSQGGKTLFTVHAANFQQYKDGGKAELHDVSITVYGREENRSD
                     YIYGSSFRYDQKSGDISADGEVHIDLDANSSAVSSGASGGAPSPQESRTLIHVKTSGL
                     TFNRNTGIAKTKEKIEFRVPGANGSAVGANYDSHTNVLALKSNVRLVSTEKEKGTIEG
                     QSATVTKDPRRIVLDHARIQQPPRTMTADKLTVLLKDDNTIDRILGAGQVHAVGEGAK
                     PFEVSAPAGEVLMSGANQPRLATISGGVTFETRGESPAAGKADRVELNFASKGQISKA
                     RLSGGVELNQGPADKTQTLKATTLDLFLAGGKRLDHAVTSDGPAQIVMNQTKPQKSNT
                     AISAGQFTAKFTAQNRLSSLYGSPEAQIVSSTGGQPDRTAHARELNAQFTSKGDISSA
                     DLNGDFQYQQAQQTATAESAHYNPADESFVLTGSPRLTDSGMSLTANRVEL"
     gene            complement(1556..1948)
                     /locus_tag="VE783_05090"
     CDS             complement(1556..1948)
                     /locus_tag="VE783_05090"
                     /inference="COORDINATES: protein motif:HMM:NF018028.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RDD family protein"
                     /protein_id="HYX52804.1"
                     /translation="MVFVPLYLIFMAPVIMHIMRQVQAGNQNPDISPAMFAPIFALIP
                     IFWAIHWLYEALLTSSSWQGTLGKKILNLRVTDMAGNRISFGRATGRFFGKIISGMAL
                     YIGFIMVGFTERKQGLHDLIVGTQVLRY"
     gene            complement(2175..3953)
                     /gene="recJ"
                     /locus_tag="VE783_05095"
     CDS             complement(2175..3953)
                     /gene="recJ"
                     /locus_tag="VE783_05095"
                     /inference="COORDINATES: protein motif:HMM:TIGR00644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008297 - single-stranded DNA
                     exodeoxyribonuclease activity [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded-DNA-specific exonuclease RecJ"
                     /protein_id="HYX52805.1"
                     /translation="MRWKYLEPESSIVQLLQREAGLSPIIARLLALRGIQSPARAREF
                     LSPSLAQLHSPYLMKGMTEAVERICRAITNREEILIYGDYDVDGTTAVVILKTAIELC
                     GGTSDFHVPHRIKEGYGIKDDVIERAAAGGVKLVISVDTGIRAFQAAQTAKRVGLDLI
                     VTDHHLPEAHEGVPEALAVLNPNQQGCDYPCKALCGAGVAFKIAQALFGKHKDEAEQK
                     KLIPSFLKMVAIATIADAVPLVDENRVMARLGLEGLRRPVNGGLKALMEVSGLAGLGR
                     DLAAGDVGFRLGPRINAAGRMDVARDVIELFTCKEPERCREIATKLDQLNAERQVEEA
                     RIVQEIEKELAAAPDLTGRFCMVFDGEGWHRGVVGIVASRVVEKTGRPALVIAREGEE
                     AHGSGRSISALHLLDALESCRELFTRFGGHAHAVGFALPSPAVAELKHRLNVYVQSKV
                     TEQDLIPELKISAEVPLRSVTPELMNSLLALEPYGQGNPEPVFCSSGVNVLIPPRIIK
                     DKHIKLRINQSENGRNSFSYEAMGWRMAERVETEGISPGEQLDVAFKIGMNFHPEFGG
                     LELTLEDYRRATGTANSVCSQAAGPV"
     gene            complement(3962..4114)
                     /locus_tag="VE783_05100"
     CDS             complement(3962..4114)
                     /locus_tag="VE783_05100"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52806.1"
                     /translation="MGYIQLGFPCQGMMFTYEVSTEWYETYQRLENAADDYDGIMIDD
                     SDTEED"
BASE COUNT          874 a         1336 c         1117 g          963 t
ORIGIN      
        1 caactccacc cggttggcag tcagcgacat tcctgagtca gtcaggcgcg gcgatccggt
       61 caaaacaaaa ctctcgtccg ccggattgta gtgagcgctt tctgccgtcg ctgtttgctg
      121 ggcctgctgg tactggaaat cgccgttcag gtcagccgat gagatatcac ctttgctggt
      181 gaactgggca ttcaattcgc gcgcgtgagc agtccgatcc ggctggccgc ccgttgagct
      241 tacgatctgc gcctccgggc tgccatagag cgaactgagc cgattctgcg cagtgaactt
      301 cgcagtgaac tggccagcgc tgatcgctgt gttcgatttc tgcggcttcg tctggttcat
      361 tacgatctgc gccggtccgt ccgacgtcac cgcgtggtcc agccgcttgc cgccggccag
      421 gaacaaatca agcgtggtcg ctttgagcgt ttgcgtcttg tctgctggcc cctggttcag
      481 ttcaaccccg ccggaaagcc gcgccttgct gatctgccct tttgaagcaa aattcagctc
      541 aacgcggtcg gccttccccg ccgcgggaga ctcaccacgc gtttcaaagg taacgccgcc
      601 tgaaatcgta gccaggcggg gctggttcgc ccctgacatc agaacttcgc ctgccggagc
      661 actgacctca aatggctttg ctccttctcc cacggcatgc acctgcccag cgccgaggat
      721 gcggtcgatc gtattgtcgt ccttcagcag cacagtcaat ttgtctgcgg tcatggttcg
      781 cggcggctgc tgaatgcgag catgatcaag cacaatgcga cgcgggtcct tcgtcacagt
      841 ggcgctctgg ccttctatgg ttcctttctc tttttcggtg ctgaccagcc gcacgttcga
      901 tttcagcgca aggacattag tgtgcgaatc ataattcgct cctaccgctg agccatttgc
      961 cccaggcaca cgaaattcga ttttttcttt ggtttttgca attccggtat tgcggttaaa
     1021 cgtgagccca ctggttttca catggatgag ggtccggctc tcctgcggcg atggcgcacc
     1081 gccgcttgct cctgaactca cagcgctgct gttcgcgtcc aggtcgatgt gcacttcgcc
     1141 atcagctgag atatcgccgg atttctggtc gtaacggaag gacgatccgt aaatgtaatc
     1201 tgaacggttc tcttcccgcc cgtagacggt aatgcttacg tcgtgcagct cagccttgcc
     1261 gccgtctttg tattgctgga aattagcggc atgtacggtg aagagcgtct ttccaccctg
     1321 cgactggctg aaggtgaacc cctgaccgct gcgttccaca ttggcgggaa tattctccgg
     1381 gagcttctcc gtaacgcggc tggtcttgat gatcccgcgg agataaaaga aggccgccac
     1441 aagaatggca agcactgctc cggaggcaaa gagcctcctc aaaatcttgg gatcaaccgg
     1501 catttacttc catgataccc tgcgccgctg atccccaggc acagctcaag tgccgctaat
     1561 agcgcaaaac ctgggtcccg acgatgagat cgtgcagccc ctgcttcctc tccgtaaatc
     1621 ccaccataat gaaaccgata tacaacgcca ttccggagat aatcttgcca aagaagcgtc
     1681 cagtggcgcg gccgaatgag atgcggttgc ccgccatatc cgtgaccctc aaattcaata
     1741 tcttcttccc caaagttcct tgccagcttg aactggtgag cagcgcctca tacagccaat
     1801 ggattgccca gaagatcggg atcaaggcga agataggcgc aaacatggcc ggagagatgt
     1861 ccgggttctg attgcccgct tgcacctgcc gcataatgtg catgataacg ggcgccatga
     1921 agatgaggta cagcggaaca aatacaattc acatggcaac gctgtcgatg agtgtcgcga
     1981 gcactcgaat ccagaatccc gcataaggct gcgcagggta ggctggggcc ggagcgtaag
     2041 ctacaggtgc agccggtgaa ctggttacca taccgcctat gcgggcgcca catttctggc
     2101 agaaacccac cccggcaggc gattgggcgc cgcattgagt gcaaaacacc atattttcgc
     2161 tcatatgggt gcgactatac cgggcctgca gcctggctgc aaacggaatt tgccgtaccg
     2221 gttgcgcgtc tatagtcttc cagagtcaat tccagccctc cgaactccgg atggaagttc
     2281 atgccgatct tgaacgccac atcaagctgc tcacccgggc tgattccctc agtctcgaca
     2341 cgctctgcca tacgccaacc catcgcttca tagctgaagc tgttccggcc attttctgac
     2401 tgattgatcc tcaatttgat gtgcttgtct ttgatgatcc ggggtggaat cagaacattg
     2461 actccgctgg agcaaaaaac cggctcggga ttcccctgtc catatggctc caacgccagt
     2521 agcgaattca tcagctccgg agttaccgaa cgcagcggca cttcggcaga gattttcaat
     2581 tccgggatga gatcctgctc cgtgaccttg gattgcacat aaacattcaa tcgatgcttt
     2641 aactctgcaa ccgccggact aggaagcgca aaacctaccg cgtgcgcgtg tccgccaaag
     2701 cgggtaaaca gctctcgaca ggactccagc gcatccaaca gatgcagagc ggaaattgac
     2761 cgtccggagc cgtgcgcctc ctcgccttcc cgcgcaatca ccagcgcagg ccggcccgtc
     2821 ttctccacca ccctcgatgc aacaataccc accacacccc gatgccatcc ttcaccatcg
     2881 aacaccatgc agaaccgccc cgttaggtca ggcgcagcag ccagctcttt ttcgatctcc
     2941 tgaacgattc tggcctcttc cacctggcgc tcagcgttta gctggtccag cttggttgcg
     3001 atctcgcggc atcgctcggg ctctttgcag gtaaacagct cgatcacgtc acgggccacg
     3061 tccattcttc ccgccgcgtt aatgcgcggc cccaacctga atcccacatc gcctgccgcc
     3121 aggtcgcgcc ccaatcccgc cagtccggaa acctccatga gggctttcag cccgccgttt
     3181 acggggcgac ggagcccctc gagccccagt cgcgccatga cgcggttttc atccaccaaa
     3241 ggcaccgcat cggcgatcgt ggcgattgcc accatcttca ggaatgacgg aatcagcttc
     3301 ttctgttccg cttcgtcctt gtgcttcccg aagagtgctt gcgcgatctt gaatgccact
     3361 ccggcgccgc acagagcctt gcacgggtag tcgcagccct gctggttagg attcagtacc
     3421 gccagcgcct ccggcactcc ctcatgtgcc tccggcagat gatggtcggt aacgatcaag
     3481 tccaagccaa ctcgttttgc cgtctgtgcc gcctgaaacg cgcgaatccc agtatccacg
     3541 ctgatcacca gcttcacgcc gccggcagcg gcacgctcaa tgacatcgtc cttgatgccg
     3601 tagccttcct tgatgcggtg agggacgtga aagtcggacg ttccaccaca cagctcaatg
     3661 gctgtcttca ggatcaccac cgcagtggtg ccgtccacat cgtagtcccc gtaaatcagg
     3721 atttcttcac gattggtaat ggcgcggcag attctctcaa ccgcctccgt catgcctttc
     3781 atcaggtacg gcgaatgaag ctgcgcaaga gatggtgaaa ggaattctcg ggcccgggcg
     3841 ggtgactgaa tcccccgcaa agctagcagg cgagcgatga tcggcgagag tcctgcttca
     3901 cgttgcagaa gctggacgat cgaactttca ggttccaggt acttccagcg catgcggcgg
     3961 actaatcttc ttctgtatcg ctgtcgtcga tcattattcc gtcataatcg tcggcggcat
     4021 tttccagccg ctggtaggtc tcataccatt cggtcgagac ttcataggta aacatcattc
     4081 cctggcaggg aaacccaagc tggatgtagc ccaccttgcc gacgaaattc ctcagccagc
     4141 gcgcttctcc agatcctcat cgttcagaaa ctcgatctcc tgcaggcgat ccgcaagcag
     4201 gtcaacgtct tctttatcca gggcgccgta attcattgtt acgaatgcgg cgccggaagc
     4261 cttggccagt tccacgaaat ctttccacgc
//
LOCUS       DASQYP010000160         6107 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_238809, whole genome shotgun sequence.
ACCESSION   DASQYP010000160 DASQYP010000000
VERSION     DASQYP010000160.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 6107)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6107)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6107
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_238809"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..719
                     /locus_tag="VE783_05105"
     CDS             <1..719
                     /locus_tag="VE783_05105"
                     /inference="COORDINATES: protein motif:HMM:TIGR00180.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000910 - cytokinesis [Evidence IEA];
                     GO_process: GO:0007059 - chromosome segregation [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ParB/RepB/Spo0J family partition protein"
                     /protein_id="HYX52807.1"
                     /translation="ALKELADSIRATGVVQPVVLRHAQNGRYQLVAGERRWLASKMAG
                     KTSIPAVVRQISNEQAMEITIIENLQREDLNPVEQARAFERLSREFGLTQEQIAVRTG
                     KDRASVANFIRLLKLPASVQDALEAGTISFGHGKVLVSLTGFPDHLDRAAKEVIEKQL
                     SVRQTEELVARLLNPEERETKPEPQKEQLDPNVREAARSLERALGVKVEIQDRKGKGK
                     IILKYGSLEDFDRILEALGK"
     gene            complement(836..1225)
                     /locus_tag="VE783_05110"
     CDS             complement(836..1225)
                     /locus_tag="VE783_05110"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52808.1"
                     /translation="MTLRLYPIVFSAAAGLLVAAMAFARGRRKSAEQLEQERRARISE
                     IGRITDGTVIDVSEVELQEAGEMQLLIYQYDVAGVSYEASQDVTALRHRVDLHSCRSG
                     LMTSIKYDPSNPGNSIVIAENWNGLRN"
     gene            complement(1428..2219)
                     /locus_tag="VE783_05115"
     CDS             complement(1428..2219)
                     /locus_tag="VE783_05115"
                     /EC_number="3.7.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013706.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fumarylacetoacetate hydrolase family protein"
                     /protein_id="HYX52809.1"
                     /translation="MKYCRFARREGAGFGIIEQVNGVDHITHVAPGERIPDILAAQKT
                     TPIPLSSARLLAPAVPSKIICVGRNYSDHAKELGNEVPKEPLIFLKSPSSLIGPGEQI
                     VRPNRLSQRVDYEGELTVVIGKPCRNLRDDEDVRHYILGYTCANDVTARDLQKKDDQW
                     SRAKGFDTFCPVGPIVTDEIDPWKGVRVETRLNGQVKQSESTTLFIFALDVVMRFAAA
                     VMTLMPGDLILTGTPAGIGPMVGGDEVSVSIEGIGSLSNPVVDQA"
     gene            complement(2265..3332)
                     /locus_tag="VE783_05120"
     CDS             complement(2265..3332)
                     /locus_tag="VE783_05120"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52810.1"
                     /translation="MRAILFYLLSAIVVVLVGCATPGPPLPPSRGIPAQITDLRAARK
                     GDTVTLTWSIPRETTDGELIRKPGIMVISRAAGSGFQDISQITMPRALDEKRPEKANA
                     SDSLSNLLQQPASDFAVYQVTSLGAQGRKSGTSNQASVPLVRTAKPPASVQLSLSPDG
                     VTISIDPGWRADLGNRLNSRYALRLMRTAEGSKERAKVAEVNPVNAAMAIVDRGIEWE
                     KRYTYWITPVTYWEGEGQKGEVVGDDSPTSTILAHDTFPPAVPQGLQAVYSGLPDQPF
                     IDMTWSPNTEPDLAGYDVYRLDSNGQWSRINTGLVKTPAFKDATVQPGHKYSYSVTAV
                     DLRGNESARSEQTSESVPPKQ"
     gene            complement(3446..4852)
                     /gene="hslU"
                     /locus_tag="VE783_05125"
     CDS             complement(3446..4852)
                     /gene="hslU"
                     /locus_tag="VE783_05125"
                     /EC_number="3.4.25.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003740291.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent protease ATPase subunit HslU"
                     /protein_id="HYX52811.1"
                     /translation="MAIYLPGTAEETDIVLDELTPKEIVSELDKYVVGQHEAKRAVAI
                     ALRNRMRRQKLPPDLAEEIMPKNIIMIGPTGVGKTEIARRLARLANSPFLKVEASKFT
                     EVGYVGRDVESMIRDLVEISIDMVREERLEEVAEKAEENAENRLLDLLLPAASTSLTP
                     ISGAGFGGGAEEHDSSKRTREKLRQQLREGALDERQVELEVRERSMPAFEIISNQGME
                     EMDINIKDMLPNIFGQRTKKRKMKVSEAFEYLIQEEEGKLIDMDQVTRVAVERVEQSG
                     IIFLDEIDKIAGREGGHGPDVSREGVQRDILPIVEGTTVNTRYGMVRTDHILFIAAGA
                     FHVSKPSDLIPELQGRFPIRVELKSLTMTDFIAILTEPKSSLTKQYTALLETEGLKLE
                     FTRESLDEIASFAFRVNESTENIGARRLHTIMERVLDEISFNAPDMKEKTVKVDAEYV
                     RKMLTDIVKDQDLSRYIL"
     gene            complement(4947..5438)
                     /locus_tag="VE783_05130"
     CDS             complement(4947..5438)
                     /locus_tag="VE783_05130"
                     /inference="COORDINATES: protein motif:HMM:NF022698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3052 family protein"
                     /protein_id="HYX52812.1"
                     /translation="MAGYSGTPLVKKLGIKAGDRMILCNEPETFLKDLGGLPPGVKAN
                     DRLTSTANFQLFFTDRRADLKKALPELVKKLDSNGMLWISWPKKSSGKPTDLTEDIVR
                     EIGLAAGVVDVKVCAIDDTWSGLKFVFRLKDRPAEPKAEKPASKPLTHKKFARARGRA
                     AAR"
     gene            complement(5450..6064)
                     /gene="hslV"
                     /locus_tag="VE783_05135"
     CDS             complement(5450..6064)
                     /gene="hslV"
                     /locus_tag="VE783_05135"
                     /EC_number="3.4.25.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015365078.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004298 - threonine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0051603 - proteolysis involved in protein
                     catabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent protease subunit HslV"
                     /protein_id="HYX52813.1"
                     /translation="MSDKHSARPSETKPRIRSTTVLCVRRNNQVVMAADGQVTLGENI
                     IKHTARKIRRLYNEKILAGFAGSTADAFSLFARFEGKLEQYHGNLGRAAVELAKEWRT
                     DKALRHLEALLLVSDASLTFLISGAGDVIEPDGGVAAIGSGGPYALAAARALMDNTDL
                     PARKIAEEAMKIAGKTCIYTNENFVIEELSASPTKEEAQSVSSR"
BASE COUNT         1269 a         1811 c         1706 g         1321 t
ORIGIN      
        1 aagcacttaa ggaattggca gactcgatcc gcgccaccgg cgtggttcaa cccgtggtcc
       61 tgcggcacgc acaaaacggc cgctaccagt tggtggccgg agagagacgc tggcttgcgt
      121 cgaagatggc gggcaaaacg agtatccccg ccgtggtccg ccagatttcc aacgagcagg
      181 ccatggagat caccatcatc gaaaatctcc agcgcgaaga cctgaatccg gtggagcagg
      241 cgcgggcctt tgagcgcctc agcagggaat tcggcctcac ccaggagcaa attgctgtgc
      301 gcaccggcaa agaccgggcc agcgtcgcca attttattcg actgctaaag ctgccagcct
      361 cggtgcagga cgcgctggaa gccggcacga tcagctttgg ccacggcaag gttctcgtct
      421 cactcaccgg tttccctgat cacctggacc gcgcagcaaa agaagtcatt gaaaagcagc
      481 tgtccgttcg ccaaaccgaa gaacttgtcg ctcggctgct caatccggaa gagcgcgaga
      541 ccaagccgga gccgcagaaa gagcagcttg atcccaacgt ccgggaggca gcgcgcagcc
      601 tggagcgagc acttggcgtg aaagtcgaaa ttcaggaccg caaagggaaa ggcaagatca
      661 tcctaaaata tgggtcattg gaagactttg acaggatcct ggaagcgctg ggaaagtaac
      721 tatattcgtt atttgttcgc aatggccaag cattttagag aatgcgatat tcatgagcat
      781 gggggatcct tgccggcgaa cccaccgtct gggacttgaa ggcaaaaacc agcccctagt
      841 tccgcagccc gttccaattt tcagcgataa cgatggagtt tccaggattc gatggatcgt
      901 atttgatcga ggtcatcagc ccggaacggc aggaatgcag gtccacgcgg tgccgcaggg
      961 cagtcacgtc ctgtgacgcc tcatagctca caccggccac gtcatactga tagatcagca
     1021 actgcatctc gccggcttcc tggagctcga cttcgcttac gtcaatcact gtcccgtcgg
     1081 taatgcggcc aatctcgcta atgcgtgcgc gccgctcctg ctccagttgt tcggcagact
     1141 tgcgccggcc acgggcgaat gccatggcgg cgaccagcag cccggcggct gcggagaaaa
     1201 cgatagggta aagacgaagc gtcacgttcc aatcctgcgt ccataaggac gctgcggcca
     1261 atttctatag atgagagtac cgcaattttg gtcgcgttta aatccgctgg agaccttatc
     1321 cagattcgag gcttttaaga attggggcct gagaaagcat gccgcctgag aaggcaaaaa
     1381 cacaagtgac catggttacc ccgcgttcgg gctacatggg ccgtagctta agcctggtcc
     1441 accacaggat tgctcagact tccgattccc tcaatactca ccgaaacctc atcgccgccg
     1501 accattggcc cgatgccggc cggcgtaccg gtcaaaatca gatcgcccgg catcagcgtc
     1561 attaccgcgg ccgcaaatcg catcaccacg tccaaagcaa aaataaacag ggtagtgctt
     1621 tcggattgct tgacctggcc attcaggcgt gtctccaccc gcacgccctt ccagggatca
     1681 atctcgtcgg tcacaatcgg gcccactggg cagaaagtgt caaaaccttt ggcccgactc
     1741 cactgatcat cttttttctg caggtcgcgt gcggtcacat cgttggcgca ggtatagcca
     1801 agaatgtagt gccgcacgtc ttcatcgtcg cgcagattgc ggcagggctt cccgatcacc
     1861 acggtcagct cgccctcgta gtccacccgc tgggaaagtc tgttagggcg cacgatctgc
     1921 tcgcccgggc caataagcga ggacggggac ttcaggaaaa tcaacggttc ttttggaacc
     1981 tcattgccca gctctttcgc atgatcactg taattgcggc ccacgcagat gatcttggaa
     2041 ggcacggcgg gggccagcag ccgcgccgat gacagaggta tcggggtggt cttctgcgca
     2101 gccagaatgt ctggtatgcg ctcacccgga gcaacgtgcg tgatgtgatc aactccgttg
     2161 acctgctcaa taattccaaa accagcgcct tcgcggcgcg cgaagcggca atatttcatg
     2221 gtgcaacgtt cctcaaaatg attttatccg gtcagtaatg cgcgctattg cttcggcggc
     2281 acggattctg aagtctgctc tgagcgcgcg ctttcattcc cccgcaggtc cacagccgtg
     2341 actgaatacg agtacttgtg accaggctgc acggttgcgt ccttgaatgc gggcgttttg
     2401 accagaccag tattgatgcg cgaccactgc ccattgctgt caagccggta aacgtcatag
     2461 ccagccaggt caggctccgt gttcgggctc cacgtcatgt caatgaacgg ttggtcgggg
     2521 agtccggaat aaacggcctg caagccctgg ggcactgcgg gcgggaaggt gtcatgcgct
     2581 aggatcgtgg aggtgggaga atcgtcgcct acaacctctc ccttctgtcc ttctccctcc
     2641 caataggtca ccggcgtgat ccagtatgtg tagcgcttct cccattcaat gccgcggtca
     2701 acgatcgcca tggcggcatt gaccgggttc acttcggcaa ccttggcgcg ctcctttgat
     2761 ccttctgcgg tgcgcatcag ccgcaatgca taacgcgagt tcagcctgtt gccgagatcg
     2821 gctcgccagc cgggatcaat gctgatggtc acgccatcag gactcaagct aagctgtacg
     2881 ctggcgggcg gcttggctgt ccggaccagc ggcacagaag cctgattgga agttccgctc
     2941 tttcggcctt gtgcaccgag cgaggtcacc tgatagacag cgaagtcaga cgcaggctgc
     3001 tggagaaggt tgctgagcga gtcgctggcg ttagctttct ccgggcgctt ttcatccagc
     3061 gcgcgcggca tcgtgatctg ggaaatatcc tgaaagccgc tgcccgcggc gcgggagatc
     3121 accatgattc ccggtttccg gatcaactct ccgtcggtag tctcacgagg gatgctccac
     3181 gtaagcgtga ccgtatcgcc cttgcgcgcg gcccgaagat cggtaatctg ggccgggatg
     3241 ccacgcgacg gcggcagcgg cggacccggc gtggcgcagc ccactagaac gaccacgatt
     3301 gccgaaagca aataaaaaag gatcgcgcgc atgagcatgg aaatggtaac aggaacggcc
     3361 aaagctgaag gcccgcgaga atgcgggcct tcagatattt gagcttatag ggacccctca
     3421 cttcgttcgg ggcaaggcaa caaaactaca ggatgtaccg cgacagatcc tggtctttca
     3481 caatgtcggt cagcatcttg cgtacatatt ccgcatccac cttgacggtc ttttccttca
     3541 tgtccggagc gttgaagctg atctcatcga gcacgcgctc catgatggtg tgcagccgac
     3601 gcgcgccgat attctcagtc gactcattta cgcggaaggc aaagctggca atttcgtcca
     3661 gcgactcgcg ggtaaattcc agcttcagcc cttcggtttc gagcagagcg gtgtactgct
     3721 tggtcaagga cgacttcggc tctgtcagaa tcgcgatgaa gtccgtcatg gtaagcgact
     3781 tgagctccac gcgaatcggg aaacgtccct gaagttcggg gatcagatcg ctaggcttcg
     3841 aaacatggaa agcgccggcg gcaatgaaca ggatgtggtc tgtccgtacc attccgtagc
     3901 gggtgttcac cgtggtccct tccacgattg gcagaatgtc gcgctgcaca ccttcccgtg
     3961 acacgtcagg cccgtggccg ccttcgcggc cggcaatctt gtcgatttcg tcgaggaaga
     4021 tgatgcccga ctgctccacc cgctccaccg ccacgcgcgt aacctggtcc atatcaatca
     4081 gtttgccttc ctcttcttgg atcaggtatt caaaggcctc gctcaccttc attttccgct
     4141 ttttggtgcg ctggccgaaa atattgggga gcatgtcctt gatgttgatg tccatctcct
     4201 ccatgccctg attggagatg atctcgaaag ccggcatgga gcgctcacgc acttccagct
     4261 caacctgccg ttcatctaag gcgccttccc gcagctgctg gcgcagtttt tcgcgtgtcc
     4321 gcttgctgga atcgtgttcc tctgcaccgc cgccgaatcc cgcgcctgaa atcggtgtta
     4381 gcgacgttga agcagcgggc agcaggagat cgagcaggcg attttcggcg ttctcttcgg
     4441 ccttttccgc aacttcctcc agccgctctt cgcgcaccat atcgatggaa atctccacca
     4501 ggtcgcggat catggattcc acgtcgcgcc ccacgtagcc gacttccgtg aacttcgaag
     4561 cctccacttt cagaaaaggc gagttggcaa gccgcgccaa tcggcgcgcg atttccgtct
     4621 tgcccacgcc agtgggcccg atcatgatga tgttcttggg catgatctct tccgccagat
     4681 cgggtggaag cttctggcgg cgcatgcgat tgcgcagcgc aattgccacg gcgcgcttgg
     4741 cctcatgctg gcccactacg tacttgtcga gctcagagac aatttctttg ggggtaagtt
     4801 catccaggac aatatcagtc tcttcggccg tgcctgggag ataaatggcc atgacgctcc
     4861 ttaaaacctg tacttcagtt caaaacgcaa attgcggcgc cgttccttct cgctcccgca
     4921 acgtgtcagc agcttaaacg tgatctttat cgtgcggccg cccttccccg ggcccgcgca
     4981 aatttcttat gtgtcagcgg cttgctcgcg ggcttctctg ctttgggctc cgcgggccgg
     5041 tccttcagcc ggaaaacaaa cttcagcccc gaccatgtgt cgtcaatggc acagaccttc
     5101 acgtccacca cgcccgccgc gagaccgatc tcacgcacaa tgtcttcagt aagatctgtc
     5161 ggcttgccag aagatttctt gggccatgaa atccagagca tgccgtttga atccaatttc
     5221 ttcaccagtt ctggaagtgc ctttttcaga tcagcgcggc gatcggtgaa gaacaactgg
     5281 aaatttgccg tgctggtaag cctgtcattg gctttcacgc ccggaggcaa tccgccgaga
     5341 tctttgagaa acgtctccgg ctcattgcac aggatcatgc gatcgcccgc cttgatgccg
     5401 agcttcttta cgagcggagt gcctgaatat ccagccattg gggtgcacct caacgcgagg
     5461 aaacgctttg cgcttcctct tttgtcggcg aggccgaaag ctcttcgatg acgaaattct
     5521 cgttggtata gatgcaggtc ttgccggcaa tcttcatcgc ctcttcggcg atcttgcgcg
     5581 ccggaagatc ggtgttatcc atcagcgccc gcgccgccgc caaggcgtat gggcctccgc
     5641 tgccgatggc cgccacgccg ccgtcaggct caatcacgtc accagcgccg ctgatgagaa
     5701 acgtaagact ggcgtccgag accagcagca gggcttcaag atgccgcaga gctttatcag
     5761 tgcgccattc cttggccagc tcaaccgccg cgcggcctag attgccgtga tactgctcca
     5821 gcttgccttc gaagcgggca aacagggaga aggcatcggc ggtggaaccg gcaaagccgg
     5881 ccaggatctt ttcgttgtaa agccgccgga tcttgcgggc ggtgtgcttg attatgtttt
     5941 cacccaatgt cacctgaccg tcagccgcca tcaccacctg gttgttgcgg cggacgcaca
     6001 ggacagttgt agacctgatt ctcggcttgg tttcggaagg acgtgcagaa tgcttatctg
     6061 acatgaggac aattccttat tatacagttt tgaccggggc caccgac
//
LOCUS       DASQYP010000161         2355 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_5818, whole genome shotgun sequence.
ACCESSION   DASQYP010000161 DASQYP010000000
VERSION     DASQYP010000161.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 2355)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2355)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2355
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5818"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..196
                     /locus_tag="VE783_05140"
     CDS             <1..196
                     /locus_tag="VE783_05140"
                     /inference="COORDINATES: protein motif:HMM:NF016167.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF433 domain-containing protein"
                     /protein_id="HYX52814.1"
                     /translation="VPGKVSGAWVLRGTRMPVATIFENLQAGANLDDILQWFHGLDRE
                     QVKAVLDFAARSLQDSAPAL"
     gene            196..522
                     /locus_tag="VE783_05145"
     CDS             196..522
                     /locus_tag="VE783_05145"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52815.1"
                     /translation="MLILFDQGTPVPLRAFLIGHTVKTAAEQEWSTLANGKLMDAAEA
                     AGFEVFVTTDKNLLNEQNLSRRKLAIVVLGNAQWPVLKLHVHLAVAAVNSVKPGSYIE
                     VEIPAP"
     gene            complement(656..1078)
                     /locus_tag="VE783_05150"
     CDS             complement(656..1078)
                     /locus_tag="VE783_05150"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52816.1"
                     /translation="MAEKMDGTGPTLCPSAQPHMPEPRVLGVVQDGEVRYLSEPVMLT
                     PELLRVTEPVGAGKVLRLAAHCQENACVHFGGGRCGLATRIVQLLPQVSEQLPACLIR
                     GQCRWYKQEGREACVRCPQIVTEFSEENEAFRRAAVGA"
     gene            complement(1335..1694)
                     /locus_tag="VE783_05155"
     CDS             complement(1335..1694)
                     /locus_tag="VE783_05155"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52817.1"
                     /translation="MKTVLEEGGPEAMSNGRKINVHELPKAIEEAVKAANQKFPQHEL
                     IMGFIAPEALAEAEAQKLAQQVAHQVAPGAQVVNVVTAAGGAAQPEAAGAAHAAGTLL
                     GRRRLLGFVASPNQLVS"
BASE COUNT          433 a          804 c          605 g          513 t
ORIGIN      
        1 ggttcccggg aaggtgagcg gggcctgggt gctccgcggc actcgcatgc ctgtcgctac
       61 catattcgaa aacctccagg caggcgccaa tctcgatgac atcctccagt ggtttcacgg
      121 ccttgatcgc gagcaggtca aagcagtact cgactttgcc gcgcgcagcc ttcaagactc
      181 cgcgccggca ctttgatgct catccttttc gatcagggaa cgcccgtgcc acttcgcgcc
      241 ttcctcattg gacataccgt gaaaactgcg gctgagcagg aatggagcac gctcgccaac
      301 ggaaaattaa tggatgctgc cgaggcggct ggctttgaag tattcgttac cacagacaag
      361 aatctgctaa acgagcagaa tttatcgcgg cgaaaactgg ccatcgttgt tctgggaaat
      421 gcccaatggc ctgtgctgaa actgcacgtt catctggcgg tggcagcagt caattcggtg
      481 aagccgggaa gctatattga ggtagagata ccggcgcctt gaggcgctta gcataactgg
      541 gtgctttccc atgaccagat catgcaatca ccccgacctt agcttcccat cagcgcagat
      601 cagcctcatc agtggtgaga ttttccctta catttcccat ttctgacaat tcccctcacg
      661 ctcccaccgc cgcccgccgg aacgcctcgt tctcttcact aaactccgtc acaatctgcg
      721 gacaccttac acacgcctct ctgccctcct gcttatacca cctgcactgt ccccgtatca
      781 ggcacgccgg caactgctcg ctcacctgcg gcagcagttg cactatcctc gtcgccagcc
      841 cgcaccgccc gccgccaaag tgcacgcagg cattctcctg gcaatgcgcc gccagtcgca
      901 gcaccttgcc cgctcccacc ggttcggtca ccctcagcaa ttccggcgtc agcatcaccg
      961 gctcgctcaa gtagcgcacc tccccgtctt gcaccactcc cagcacccgc ggctcaggca
     1021 tgtgcggctg cgcgctcggg cacagtgtcg gtccggttcc atccatcttt tccgccatgg
     1081 gcctacctcc tatgctgcgc aggagagaag acgggacgcg ccacgcccgg caaagcgctt
     1141 ctcgcgcgtg tgtgtatcct gcaagaccgc atcattcacc aatcggtccc gcgattgacg
     1201 ccccgcgctg cccaaccttc catccaccac ccgctggcca gcgccggccg ccttcgcccc
     1261 cacacacccg cgcgttcaca ccacgcctcg catggcgctc ccgtcccaat tcttctcctg
     1321 gttttgcgcc ccttttacga gaccagttgg ttcggtgacg ccacaaagcc cagcagccgc
     1381 ctgcggccaa gcagcgttcc ggcagcgtgc gccgctccgg ctgcctcggg ttgtgctgct
     1441 ccgccggccg cggtgaccac gttcaccacc tgcgctccgg gggccacctg atgtgctacc
     1501 tgttgcgcca gcttctgcgc ttcggcttct gccagcgcct ccggcgcaat gaatcccatg
     1561 atcagctcgt gctgcgggaa cttctggttc gccgccttca ccgcttcctc aatggctttc
     1621 ggcagctcgt gtacattgat ctttcttcca ttcgacatcg cttccggtcc tccttcttcc
     1681 aagaccgtct tcatagtgcg atttcgaaat ggaacgttac atctcgcagc cccgcgtgag
     1741 cggaaaaaga gctttacggc tgatctagac cgctgcctca actcctcttc ctctgcccct
     1801 ctgcgttcca aaagattttt tcgttttgac tcctcgggtc tcgcatgcca ctcgcaagct
     1861 gagtgaagac cgcgcggaca acgtccccac atcctgcttc agccgggcaa catccccctg
     1921 accacgatgc tcgcccccgg cgctatggga gagagccgtc aggtcggcag cgagagctca
     1981 aagcaggcgc aggccgaaaa tcgccgcgtt gtcgtccgcg tcccgcagaa caaggccgtc
     2041 gctgggctga gacctcttat gacccaagta cgagagtgga gttgaaacga atttgacacc
     2101 gatcggccta atcgacgctg cgcggggggg cgacatggtc gcaatcttgg aaagttgtgt
     2161 agcacaggca ctcctgcctg tgcttttttg ttgtcatgaa gtgcttgacg agtggtccgt
     2221 gagagccgcc cttctcccgt actcctgggt aaacagcact acttcgtttg attcgtttgc
     2281 tttgatgtgg tgcttgacca aggtgacatt gttacctccg cggcatcgaa gaagaagtgc
     2341 tcaggagcaa gttgc
//
LOCUS       DASQYP010000162         3544 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_260875, whole genome shotgun sequence.
ACCESSION   DASQYP010000162 DASQYP010000000
VERSION     DASQYP010000162.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 3544)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3544)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3544
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_260875"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..416)
                     /locus_tag="VE783_05160"
     CDS             complement(<1..416)
                     /locus_tag="VE783_05160"
                     /inference="COORDINATES: protein motif:HMM:NF013499.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="OB-fold nucleic acid binding domain-containing
                     protein"
                     /protein_id="HYX52818.1"
                     /translation="METTTTQAPIATIAEIGRHDGETVTIRGWLYNKRESGKLIFPIF
                     RDGTGVIQGVVPKNQVTPEVFDALKNLTDESSVIVTGKVRADKRAPGGYELDVSDVRV
                     VQRVPDEDPFPIARKEHGPDFLMEHRHLWIRTPRQAA"
     gene            complement(457..1224)
                     /locus_tag="VE783_05165"
     CDS             complement(457..1224)
                     /locus_tag="VE783_05165"
                     /inference="COORDINATES: protein motif:HMM:NF013429.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar phosphate isomerase/epimerase family
                     protein"
                     /protein_id="HYX52819.1"
                     /translation="MKRGGAQAIELFAAKGHFNYTDREHIKELAGWFKSEGVEFHSMH
                     SPLYESNDFRSGGKALNIVDPDKPSRIEAMDEIKRALEVAEILPFRFLIQHIGKSDEY
                     WDPRKFEWALSGVEHLRAFARQLGVTLLIENTPNDLATPEKLVELLKTLHYPDLGICF
                     DTGHAHLMSTVHQAFGVLGDRVRSTHVHDNKRDRDSHLWPGEGTIDWNETMQAIASAP
                     QVPALLLELEGEEGVDIAAKMAETYKNLENAAVPAES"
     gene            complement(1290..3032)
                     /gene="ggt"
                     /locus_tag="VE783_05170"
     CDS             complement(1290..3032)
                     /gene="ggt"
                     /locus_tag="VE783_05170"
                     /EC_number="2.3.2.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR00066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006750 - glutathione biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamyltransferase"
                     /protein_id="HYX52820.1"
                     /translation="MRVLHKYFAFQLLACLLLGIASQPARPDGLRPVHARKAMVVSVH
                     QEASRAGAEILRGGGNAVDAAVATGFALAVVHPAAGNLGGGGFLLLRTGKGEVHFVDF
                     REKAPKAASRDMYLDAQGNVIPDASLVGYKAIGVPGSVAGLVYAQKHWGKLPLKTVME
                     PAIRLASEGVRLTWEESQSMHEKDLALFPDSKRIFQRDGKLYEQGELFKQPELAHTLR
                     RIAQNPDDFYKGQMARELSEDIQRGGGLITAQDLAEYEVKERPAIRGTYRGYEIFSAP
                     PPSSGGVTMLEALNILEGYDLSKLGNRSADAIHLTAEAFRRAFYDRAEFLGDPDFSAL
                     PIAQLADKKYAKAWRESVSDTQASSSKELRRPSGFGDLDRQAAARPPYVGPEKENTTH
                     YSVVDQEGNAVAVTTTLNDSFGSRVTSAHLGFLLNDEMDDFTSKPGVPNGYGLIQGEA
                     NAIGPGKRPLSAMAPTIVLKDGKLFMVLGSPGGPRIISTVANILMGVIDYGMDIQQAV
                     NAPRFHHQWEPDEIDIERVGISPDTIKLLEARGHKVKAQGYWSDGECIAVDPKTGDLL
                     GAPDGRNGGKAVGY"
     gene            complement(3302..>3544)
                     /locus_tag="VE783_05175"
     CDS             complement(3302..>3544)
                     /locus_tag="VE783_05175"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52821.1"
                     /translation="KATAKARAKPTPFHQGMIQSRCSRGKQLFSSSGVSAGIAMLTHR
                     QGFFVLDNAFALIEGTPARATKCLIPINSFETGSIY"
BASE COUNT          671 a         1096 c          982 g          795 t
ORIGIN      
        1 gccgcttggc ggggcgtgcg gatccagaga tggcgatgct ccatcagaaa atccgggccg
       61 tgctctttgc gtgcgatggg gaacggatcc tcgtccggta cgcgctgcac cacccttaca
      121 tcgctcacgt ccagctcgta gccgccgggc gcgcgcttgt ccgcccgtac tttcccggtt
      181 acgatcacgc tcgattcatc cgtcaggttc ttcagcgcgt caaagacttc gggcgtgacc
      241 tggttcttcg gcaccactcc ctgaatcacg ccggtgccgt cacggaatat gggaaagatc
      301 agtttgccgc tctcgcgctt gttgtacagc cagccgcgga tggttacggt ctcgccgtca
      361 tgccggccga tctcggcgat tgtggcaatg ggtgcctgtg ttgtcgtagt ctccataaaa
      421 tctttctcgc gcaacatcat catgcgctgc ccggcgttag gactcagccg gtactgccgc
      481 gttctccagg ttcttgtacg tctcagccat ctttgcggct atatcgacgc cctcttcgcc
      541 ctcaagctcc agcagcagag ccggaacctg cggcgcagaa gcaattgcct gcatggtctc
      601 attccagtcg atcgttcctt cgcccggcca caggtgcgag tcgcggtcac gcttgttatc
      661 gtgcacgtgg gtggagcgga cacggtcacc cagcacccca aacgcctgat gaaccgtgct
      721 catcaggtgc gcgtgtccgg tatcgaagca gatacccaga tcaggatagt gcagcgtctt
      781 gagcagctcc accagcttct ccggcgttgc caggtcgttc ggcgtgttct cgataagaag
      841 tgttacaccc agctgccgcg cgaaggcccg cagatgctca acaccactca gcgcccattc
      901 aaacttgcgc gggtcccagt attcgtcgct cttgccgatg tgctggatca ggaagcgaaa
      961 cggcagaatc tccgccactt ccagcgcgcg cttgatctcg tccatggcct caatgcggct
     1021 gggcttgtcc ggatccacaa tgttcagcgc cttgcctcct gaccggaaat cattgctctc
     1081 gtaaagaggc gagtgcatgg aatggaactc cacgccttca gacttgaacc accctgcaag
     1141 ctccttgatg tgctcgcggt cggtgtagtt aaaatgccct ttggcggcaa aaagttcaat
     1201 tgcctgagcg cccccgcgtt tcatcgtgtc cagaaggccc ggatgcagcc gccttttaat
     1261 gtggatgtaa ctcgacattg cgcgcagcat cagtagccca ccgcctttcc cccattgcgt
     1321 ccatccggag cgcccagcag gtcacctgtt ttgggatcca cggcaatgca ctcgccatca
     1381 ctccaatagc cctgcgcttt cactttgtgg ccgcgcgcct ccagcagttt gatcgtatcc
     1441 ggcgagatcc ccacccgctc gatatcgatt tcgtccggct cccattgatg atggaaccgc
     1501 ggcgcgttta ccgcctgctg tatgtccatg ccgtaatcga tcactcccat aagaatattc
     1561 gcgaccgtgc tgataatgcg cgggccaccc ggcgacccca gcaccataaa gagctttccg
     1621 tctttcagca cgatcgtcgg cgccatggcc gagagcggcc gtttacccgg cccaatggca
     1681 ttggcctcac cctgtatcag tccgtagccg ttcggcacac ccggcttgga ggtgaagtcg
     1741 tccatttcgt cattgagcag gaatccgagg tgcgctgaag tcacgcgcga gccaaagctg
     1801 tcattcaacg tcgttgttac ggctacggca ttgccttcct ggtccaccac ggaatagtgc
     1861 gtagtgtttt ccttttccgg cccgacatac ggtggacgcg cagccgcttg acggtcgagg
     1921 tcgccgaaac ccgatggccg gcgcagctct ttgctgctgc tcgcctgagt gtcacttacc
     1981 gattcgcgcc acgctttggc atatttcttg tccgctaatt gtgcgatggg cagtgcgctg
     2041 aaatcgggat cgccgaggaa ttccgctcga tcataaaacg cgcgacggaa ggcctccgct
     2101 gtcaggtgga tcgcgtcggc ggagcggttg cccagcttgc tgagatcgta accttcaaga
     2161 atattcaacg cttccagcat ggttacgccg ccggagctcg gtggaggagc actgaagatc
     2221 tcatatccgc gatacgttcc ccgaattgcc ggacgctctt tgacttcgta ctccgctaaa
     2281 tcctgggcgg tgatcaggcc gccgccgcgc tggatgtctt cggacagctc tctggccatc
     2341 tggcctttgt agaagtcgtc aggattctgc gcgatgcgtc gcagcgtgtg cgccagctcg
     2401 ggttgtttga agagttctcc ctgctcgtac agtttgccgt cgcgctggaa aatgcgcttt
     2461 gaatcgggga agagcgccag gtctttctcg tgcatggact gcgattcttc ccacgtgagg
     2521 cggacgccct cactcgccag ccggatggca ggttccatca ccgtcttcaa aggaagtttg
     2581 ccccagtgct tttgcgcgta taccagaccg gcaacagatc ccgggacgcc gatggctttg
     2641 tagccgacca gactggcatc tgggatcaca ttcccttgtg cgtccagata catgtcccgg
     2701 ctcgcggctt tcggagcttt ctcgcggaag tcaacaaaat gcacttcacc ttttccggtt
     2761 ctcaacagca ggaagccccc gccgcccaga ttgccggctg ccgggtggac caccgccagc
     2821 gcaaatccag tcgctaccgc cgcatcaacg gcgttaccac cgccgcgaag aatctcagcg
     2881 ccggcgcgcg aagcctcctg gtgaacgctc accaccatcg cctttctggc gtgcaccgga
     2941 cgcagcccat cgggacgggc aggctgcgac gctatgccca acagaaggca ggcaagtagc
     3001 tgaaaagcaa aatatttatg caggactctc atgcggttaa ggccggctca ctgagaacga
     3061 gaaggcgcga gcccgctgcg taaagagaac cagcaggcca gctattgagg ctagcgtacc
     3121 cgctggggac agtcaaatgc ctggagagtg aagccgaatg ctttgcgttg gcggctttcc
     3181 ctttttcgaa gcttcgattg tcttgcctcg aacccgcgtt ctttgggggt tgtattcagt
     3241 cccgagcgca gcgaagggtc cctttggcca cgagaatctc ccggattgcc atccttgaag
     3301 cctaataaat tgaaccggtc tcaaaagagt tgatcgggat aagacacttt gtagcacgcg
     3361 ccggggtccc ctcaataaga gcgaaggcgt tgtcaaggac aaaaaatccc tggcgatgcg
     3421 taagcatcgc gatgccggcc gaaactcctg acgacgaaaa caactgtttg cctctgctac
     3481 atctcgactg aatcatccct tggtggaacg gggttggttt tgctcttgct tttgctgttg
     3541 cttt
//
LOCUS       DASQYP010000163         2477 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_281329, whole genome shotgun sequence.
ACCESSION   DASQYP010000163 DASQYP010000000
VERSION     DASQYP010000163.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 2477)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2477)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2477
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_281329"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..668
                     /locus_tag="VE783_05180"
     CDS             <1..668
                     /locus_tag="VE783_05180"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52822.1"
                     /translation="KFIEMLEQGYDLVSGWRKERVDNFVMRRIPSRIANWTMAKLSGV
                     DIHDFGTTYKAYRRDIIQQLPLYGELHRFIPALASWYGASICEIPIRNIVRPKGTSHY
                     GISRTFRVFFDLITIRFLLKYMYRPLHLFGSVGMLSLFSGLGISLWLMMSKVLLHQSV
                     MGEHGPLLIFAAVLIVFGGQMLALGLLGDLQVRNFQEPARRVPYTVAHVLRSQSQEQA
                     VNE"
     gene            686..1879
                     /locus_tag="VE783_05185"
     CDS             686..1879
                     /locus_tag="VE783_05185"
                     /EC_number="2.6.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012382.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal phosphate-dependent aminotransferase"
                     /protein_id="HYX52823.1"
                     /translation="MSTATTGTELRLAKRMSRLGTETAFEVLAKARALEAQGRSIIHL
                     EIGEPDFDTPANVVEAGVNAMRGGWTHYSPSAGLPALRETIAADVTRTHGVPVTAEEV
                     VVVPGGKPTIYFTFTALVEEGDEVIYPNPGFPIYESLINFTGAKPVPLQMREENDFRL
                     DPNELADLITDRTKLIVLNSPHNPTGSMLTEQDVKDIAAAIGDRDIMVLSDEIYSRLV
                     FDGKHLSLMSLPGWRDRVIMLDGYSKTYAMTGWRLGYGVMRKDLAVHFGRLMTNVNSC
                     SAGFTQIAGIEALKGDQSSVEHMRQQFMARRDKFIAGLNKIPGFSCKLPHGAFYAFPN
                     ITKTGWTSKNLSQALLDQAGVACLSGTAFGKFGEGYLRFSIANSMENLNLALERIGDW
                     TKKNL"
     gene            complement(2223..>2477)
                     /locus_tag="VE783_05190"
     CDS             complement(2223..>2477)
                     /locus_tag="VE783_05190"
                     /inference="COORDINATES: protein motif:HMM:NF016836.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BON domain-containing protein"
                     /protein_id="HYX52824.1"
                     /translation="IDSNVDDGIEKDFKAVIIANRLEKQHIRYDAKNGVLTLKGDVDS
                     AGQRSEVEKLAAGVPNVQQVVNELDVKGAKKHHDNGTTAP"
BASE COUNT          511 a          686 c          731 g          549 t
ORIGIN      
        1 ccaagttcat tgagatgctg gagcagggtt acgacctggt gagtggctgg cgcaaggagc
       61 gcgtggacaa ctttgtgatg cgccgcattc cttcgcgcat tgcgaactgg actatggcca
      121 agctgagcgg cgtggatatc cacgactttg ggaccaccta caaggcgtat cgccgcgaca
      181 ttattcagca gcttccgctc tacggcgaac tgcaccggtt cattcctgca ctggcctcat
      241 ggtacggtgc ttcgatttgc gagattccca tccgcaatat cgtccggccc aagggcacat
      301 cgcattacgg catctcgcgg accttccgcg tcttctttga cctgatcacc attcgtttcc
      361 tgctgaaata tatgtatcgc ccgctgcacc tgtttggcag cgtaggcatg ctctctctgt
      421 tcagcggact gggcatctca ctgtggctga tgatgtccaa ggtgctgtta caccagagcg
      481 tgatgggcga acacggcccg ttgctgatct ttgccgccgt gctgattgtc tttggcgggc
      541 agatgctggc gctgggcctg ctgggtgacc tgcaggtaag aaacttccag gagcctgccc
      601 ggcgtgtgcc atacacggtg gcgcacgtgc tgagatcgca aagccaggaa caggccgtta
      661 acgagtaatc acaaaagagt aaaagatgag cacagcaacc accggtacag agttaagact
      721 ggccaagcgc atgtcgcgcc ttggaacaga gactgccttt gaagttctgg caaaggcgcg
      781 cgccctggaa gcccagggca gaagcatcat ccacctggag atcggcgaac ccgattttga
      841 cacgcccgcg aacgtggtgg aagccggcgt gaacgcgatg cgtggcgggt ggacccacta
      901 ttcgccttcc gcaggtctgc ctgcgctgcg tgaaaccatt gcagcggatg tgacccgcac
      961 gcatggcgtc cccgtgacgg cggaagaagt ggtggttgtt cccggcggca agccgacgat
     1021 ttacttcacc tttaccgcgc tggtggaaga aggtgatgag gtcatctacc cgaatcccgg
     1081 gttcccgatt tatgagtcgc tgatcaactt caccggcgca aagccggtgc cgctccagat
     1141 gcgcgaagag aacgacttcc gcctggatcc gaacgaactg gcggacctga tcactgaccg
     1201 caccaagctg atcgtgctca actctccgca taacccgacg gggagcatgc tgacggaaca
     1261 ggacgtaaag gatattgcgg cggccattgg cgatcgggac atcatggtgc tgtccgacga
     1321 aatctacagc cgcctggtgt ttgacggaaa gcatctctcg ctgatgtcgc tgcccggctg
     1381 gcgcgatcgc gtgatcatgc tggatggcta ctcgaagacg tacgcaatga ccggatggcg
     1441 cctgggttac ggcgtaatgc gcaaggatct ggctgtccac tttggccggc tgatgaccaa
     1501 cgtgaactca tgcagcgccg gcttcacgca gatcgccggc attgaagcgc tgaagggtga
     1561 tcagtcttct gttgagcaca tgcggcagca gttcatggcg cgtcgtgaca agttcattgc
     1621 cgggctgaac aagattcccg gattcagttg caagcttccg cacggcgcgt tctatgcttt
     1681 cccgaacatc accaagacgg gttggacgtc aaagaacctg tcgcaggcat tgctcgatca
     1741 ggccggtgtg gcgtgccttt ccggaacggc attcggcaag tttggtgaag gctacctgcg
     1801 cttcagcatt gccaactcga tggagaacct gaatttggcg ctggaacgca ttggcgactg
     1861 gacgaagaag aacctgtaag cagagccgga caatcttaag gtttgaaaca cacggcccca
     1921 atgggccgtg tcgctttgaa ggcaggccgc gaggccatcc ggctgtttaa aaaatttacg
     1981 ggctccgccc tgaggcacct ccccaaatgg ctgacggatg ttttggaaag aaattacagc
     2041 gggtttccgg ctcggatgcc ctacgttgta aataaggaag ctttcaccga gacggatttc
     2101 gagatctgag ttctggcaag ttccaaacct gtgctcaggc gcagcagcaa attgaaagga
     2161 cggccgaggt ttggccgtcc ttaagagtag ctgaattgtt cttttacaac ctggtagcga
     2221 ttttacggtg cggtggttcc gttgtcatga tgtttcttcg cgcctttcac gtccagctcg
     2281 tttaccacct gctgcacgtt gggcacgccg gccgcgagct tttccacttc agagcgctgg
     2341 cctgcggagt ccacgtcgcc cttgagcgta aggacgccgt tcttcgcgtc atagcggatg
     2401 tgctgcttct ccagccggtt tgcgatgatc acggccttga agtctttttc aataccgtcg
     2461 tccacgttgg aatcgat
//
LOCUS       DASQYP010000164         7513 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_91161, whole genome shotgun sequence.
ACCESSION   DASQYP010000164 DASQYP010000000
VERSION     DASQYP010000164.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 7513)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7513)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7513
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_91161"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1854
                     /locus_tag="VE783_05195"
     CDS             <1..1854
                     /locus_tag="VE783_05195"
                     /inference="COORDINATES: protein motif:HMM:NF012801.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HYX52825.1"
                     /translation="TIATTGIEQLEVLRGPNSVLYGPDAMAGVVELSTRRGTTLKPEI
                     GYSFDAGNFGSLRNDVSLAGMFRRLDYFGEFSRNDISNAVPNSAFHNGTYVANLGLAL
                     NSATQLRFTGRYTTTALGQPNVVDLFGIADNSTERDQDAYITASFDQQTTSRWHNLLR
                     YGATRLRLQDVNPSPSGVFDPGSGNFLGLPTTIHGANGFTVAGQAILDFAGDYPQITG
                     SSTKRDSVYFQSDYSFTPQLTGLLAFRFEQERGFTLAFGSSTAADRGNYSYIAEMHGS
                     LGSRAYATVGGSIERNAVFGTAAIPRASLAYYVVRPRSSGATAGTKLRASYGQGIREP
                     SIFEATSSLFGLLSGPGGDPTLTTQFHLAPIAAERSRSFDVGVDQLFAGGKAKLTAAY
                     FHNQYTNEIEFVPNTALPLLGVPQPVADASGFGATINSGDLRAQGMETEVDAGLGHGF
                     SLRAGYTYLDAVVQRSFTSDAFNCSPPAPQPFCANPAFPGIPIGAFAPLVGARPFRRA
                     PHTGSFRVGYSREKFNLFVGGYLVSRRDDSTFLSDANFGNSLLLPNHNLAAAYQKVDF
                     EGGYRVNQKLRFFTVVENLASQHYDPVFGFRALPLNFRLGAKVTLGGESWK"
     gene            2005..3276
                     /locus_tag="VE783_05200"
     CDS             2005..3276
                     /locus_tag="VE783_05200"
                     /inference="COORDINATES: protein motif:HMM:NF014244.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M50 family metallopeptidase"
                     /protein_id="HYX52826.1"
                     /translation="MELASETKTFAAYSPTSTPILDVLRPVPNSGLEKVSAGEYFFLS
                     SGFILILIYLPELRHLLAQASTGSRGILNIFVFAPVAAMAGAVLVHELGHLIAARLGG
                     FRLVRLRWGFSHEESCSADRRLHFCEVLPVGGIMLAPRKLRQLKRSLMCLFAAGPITS
                     VGFAVLLEACPAWDAVGPALAVGVHLTAIFSALMGTAALLPDSTRSGNFSDGARLLML
                     VRNDERGRRWLAILEMQLALEHGINPRDWDPLRISEAAAASDDTRDHVTGCWLAYLAA
                     AERQDITSATRFLEEALAAPAASSAWVRDRLFVEAAVFQAWYRDNPGKARSWVAMIHE
                     RKLDELQKLRLKSALLWADGKLFDAWEQTAAYLKAVQQLSQSPGRDLAEKSTQEWRRQ
                     MESRMLTRAWRSMYSLSQEVELTTVPAQNAV"
     gene            3369..4223
                     /gene="rapZ"
                     /locus_tag="VE783_05205"
     CDS             3369..4223
                     /gene="rapZ"
                     /locus_tag="VE783_05205"
                     /inference="COORDINATES: protein motif:HMM:NF015620.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNase adapter RapZ"
                     /protein_id="HYX52827.1"
                     /translation="MSTHLVVITGMSGSGKASVMKAFEDLGYYCVDNMPIGLIPRFAD
                     LARQSPEIEKAAIVTDIREGEGLKKLPAIIRALKRQLSVTVLFLEAADEVLLRRFSET
                     RRPHPLGKDSTVKAALHQERRMLQPIRKIADVVVDSSKFNVHELRSHITGKFTPGNTE
                     QEILVSVVSFGYKAGVPTDADLLFDVRFLPNPHFVPEFRPLTGRHPKVAKYIRSFPQT
                     QEFIDRISELLIYLMPHYVSEGKSYLTIGFGCTGGQHRSVLIAEEVKKRLAKAGYRVK
                     VDHRDSPK"
     gene            4322..6181
                     /locus_tag="VE783_05210"
     CDS             4322..6181
                     /locus_tag="VE783_05210"
                     /inference="COORDINATES: protein motif:HMM:NF012869.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HYX52828.1"
                     /translation="MRQLNRLLVYLRPFLPQFFGSILLMAMVGAMEGFRILLIGPIID
                     RVLNPGTPGRSLTLFTIPGTDHKVYLQNFVPEHFRNPLTVVVVALIGTSIIKGLCDYL
                     GTYLVNYAGYGMITDVRVKLYDRILGRSIAFFSRNSTGTLISTVVNDVEKIQVTLTIA
                     LAEFLQQFFTLIFLLGVVIVLGKKLALVLVIFVPFVVVSAGKIGRRVRSTTRKGQDKL
                     ADIQNILHESITGNRIVKAFGMEKWESSKFFGAARRLFRANLKSVAVQAISSPLMDFI
                     GALAVALLLWVGRMQVRGGAMTTGVFLAFIFAVFRLYDPVRKMAFFNNSFQQALGASQ
                     EIFRLMDETEEIQDRPGARPLPAFRDSVRLDNVSFSYTGANGGEPEILRNIDMETRAG
                     EIVAIVGSSGAGKSTLVHLIPRFFDVTSGAITIDGHDIRDVTLASLRAQIGIVTQETI
                     LFNDTVRNNIAYGQPGVPMDAVEEAAKAALAHDFIMRLPDGYNTIIGERGLRLSGGER
                     QRVAIARALLKNAPILILDEATSALDTESESLVQAALQNLMSGRTVFVIAHRLTTVRH
                     ADRIVVIENGRISDSGTHEDLLTRLGTYRKLYELQFMDLDPKMNEEAVRGKVL"
     gene            6208..7095
                     /locus_tag="VE783_05215"
     CDS             6208..7095
                     /locus_tag="VE783_05215"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR00255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016788 - hydrolase activity, acting on
                     ester bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YicC/YloC family endoribonuclease"
                     /protein_id="HYX52829.1"
                     /translation="MSIRSMTGFAQVKSQAGDGISFTLSVKSVNHRFLDPQLRLPPDM
                     DELEMKLRRMLKEKLARGHVEVTLSVERRPGEGFSFNRELVGGYVTAFRKAAAEFGAV
                     GEPDLNVAFRLPGALGETASLDGDFQGAVVAAMEQAIQKLNVMREHEGQGMEQEMRRR
                     LKVLEEATDEVSHHGGAVSRAVLEKVRARMQELLENTKADEDRILQEAALLAERSDIQ
                     EELVRLKTHIEHFRKLLEQGGEVGKKLDFLLQELNREANTLLSKTSGITGEGLRITEL
                     GLRMKSEIEKCREQVQNLE"
     gene            7092..>7513
                     /gene="gmk"
                     /locus_tag="VE783_05220"
     CDS             7092..>7513
                     /gene="gmk"
                     /locus_tag="VE783_05220"
                     /EC_number="2.7.4.8"
                     /inference="COORDINATES: protein motif:HMM:TIGR03263.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004385 - guanylate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0015949 - nucleobase-containing small
                     molecule interconversion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="guanylate kinase"
                     /protein_id="HYX52830.1"
                     /translation="MSGLLFIISAPSGSGKSTLVNEVRKYVANLEFSVSYTTRPPRGS
                     EQDGQEYHFVSREQFEGMIMRDEFLEYAEVFGRDFYGTSKLVLPEAARRGSDVLLDID
                     VQGAKQVKEKIPAAVSIFVLPPSRHELESRLRKRSMSE"
BASE COUNT         1526 a         2149 c         2216 g         1622 t
ORIGIN      
        1 acgattgcga ccaccggaat agagcagctt gaggtcctgc gtggtccaaa tagcgtgctg
       61 tacggcccag atgcaatggc cggagtggtg gagttgagca cacgtcgggg cacaacgctt
      121 aaacctgaga tcggttactc ctttgacgcg gggaattttg gcagtcttcg caatgacgtt
      181 tcactcgcag gtatgttccg ccggctggac tatttcggcg agttctctcg caacgacatt
      241 tccaatgctg tgcccaacag cgccttccat aacgggacct atgtcgcgaa cctggggctc
      301 gcactgaact cggccacgca gttgcgcttt accggccgat acacgacaac agccctgggc
      361 cagccgaatg tggttgatct cttcgggatc gcggacaatt caaccgagcg tgaccaggac
      421 gcgtacataa ccgcaagctt cgatcagcaa accaccagcc gctggcacaa cctgctccgc
      481 tatggcgcaa ctcgactgcg gctccaggat gtaaacccgt cgccctcggg cgtctttgat
      541 ccgggatcgg gtaatttcct cggcctgcca acaacaattc acggtgcgaa cggcttcacg
      601 gtcgcaggac aggcgattct tgactttgcc ggcgactatc cgcagatcac cggcagctcc
      661 acaaagcgcg acagcgtcta ctttcagtcc gactacagtt ttactccgca gctcaccggg
      721 ctgctggcgt ttcgctttga gcaggagcgc ggctttacgc tcgctttcgg gagcagcacg
      781 gccgctgatc ggggcaatta cagctacatc gctgagatgc atgggtcgct gggcagccgc
      841 gcctatgcca cggtgggcgg cagtattgag cgcaacgccg tctttggaac agcggcgatc
      901 ccgcgggcct cgctggccta ctacgtcgtc cgcccgcgct cgtcaggcgc gacggccggc
      961 acgaagctga gagccagcta cgggcaggga atcagggagc cttcgatttt tgaagcaaca
     1021 tcgtcgctct ttggtctgct ctccggtccg ggtggcgatc ccaccctgac cacccagttc
     1081 caccttgcgc cgatcgctgc tgaacgctcg cgcagcttcg acgttggtgt ggaccagctg
     1141 tttgcaggcg gaaaggcaaa gctcaccgcg gcttacttcc acaatcaata cactaacgag
     1201 attgagtttg tgccgaatac ggctttgccg ctgctcgggg tgcctcagcc ggtggcagat
     1261 gcctctggtt tcggagctac cattaactcc ggcgatctgc gagcacaagg gatggagacg
     1321 gaagtggacg cgggcctcgg ccacggtttc tcgctccggg ccggatatac gtatctcgat
     1381 gctgtggtgc agcgctcgtt caccagcgat gccttcaact gctccccacc cgccccgcag
     1441 ccgttctgcg caaacccagc attccccggc attccgattg gtgcgtttgc tccgttggtg
     1501 ggagcgcgcc cgttccgtcg tgctccgcac accggcagct ttcgcgtggg atattcccgc
     1561 gagaagttca acctgttcgt gggtggttat ctcgttagtc gcagagatga cagcactttc
     1621 ctcagcgacg ccaacttcgg aaattcactg ctgctgccca accacaatct cgcggcggca
     1681 tatcagaagg tggattttga aggtggctat cgcgtgaacc agaagcttag atttttcacg
     1741 gtggtagaga accttgccag ccagcactac gatccggtct tcggtttccg ggctctgcct
     1801 ctcaatttcc ggttgggggc gaaggtgaca ctgggcgggg aaagctggaa atagcaactc
     1861 ttgtttcggg cgcgtgaagc tcagggacgg gccctattac cgggtaacgt gaccaaagtc
     1921 catctactca cgacctcatg caccggcgag aacatgaaca tatgatgatg cctgtcatgg
     1981 gccgtaaggc ccatcactcc ccacatggaa ctagcgtccg aaacaaagac gtttgcggcg
     2041 tattctccaa cctcaacgcc catactcgac gtccttcgtc ctgtcccgaa ctccgggctg
     2101 gagaaggtca gcgccggcga gtatttcttt ttaagtagcg gtttcattct catccttatc
     2161 tatctgccgg aattgcgcca tttactggca caggcctcaa ccggatcccg cggcatccta
     2221 aatatctttg tttttgcgcc tgtggcagcc atggccggtg ccgtccttgt gcacgagctc
     2281 ggacacctca tcgccgcccg gctcggcgga ttccggctgg ttcggttgcg gtggggtttt
     2341 tcccatgaag agagctgctc cgctgaccgt cgcctgcatt tttgtgaagt cctgccggtt
     2401 ggcggcatca tgcttgcgcc gcgcaaactc aggcaattga agcgtagcct gatgtgtctt
     2461 tttgccgccg gaccgattac gagcgttggc ttcgccgtcc tgctggaggc ctgcccggcg
     2521 tgggacgccg ttggtcctgc actggccgtt ggggtccatc tcacagctat tttttccgct
     2581 ctcatgggca cggccgcgct gctgccagac agcacccgat ccggcaactt ctctgacgga
     2641 gcacggttgc tcatgctggt gcgcaacgat gagcgcggcc ggcgctggct cgccatcctg
     2701 gaaatgcaac tggcgcttga gcacggaatt aatcccaggg attgggaccc actcaggatt
     2761 tccgaggccg ccgcggcaag tgacgatact cgcgaccatg taaccggttg ctggcttgcc
     2821 tatcttgcgg cagcggaacg ccaggacatt acttctgcta cccgctttct ggaagaagcg
     2881 ttggccgcgc cagccgcctc ttcggcgtgg gtgcgtgacc ggctgttcgt ggaagccgcg
     2941 gtttttcagg cctggtaccg tgacaatccc ggtaaggcca ggtcatgggt ggcgatgatc
     3001 cacgaacgca agctcgacga actgcaaaag ctgcgcttga agtctgcgct cttgtgggcg
     3061 gatggcaagt tgtttgacgc gtgggagcag accgccgctt acctgaaagc ggtgcagcag
     3121 ctctcgcaat ctcctggtcg cgacctcgcc gagaagagca cgcaagaatg gaggcggcaa
     3181 atggaatcgc gtatgttgac tcgcgcctgg cgctccatgt actcgctgag ccaggaagtg
     3241 gaactcacca ccgttcccgc gcagaacgcc gtctaactct ccagtgcggc aaaaaccctt
     3301 cgtgttagta tcgctttgtg gcggcttcag gaaaatattc tcgttcggcg gccaagagta
     3361 cgcgcggctt gagcacccat ctggtggtga tcaccggcat gtccggctcg ggcaaggctt
     3421 ccgtgatgaa ggcctttgaa gacctgggct actactgcgt ggataatatg cccattgggc
     3481 tcattccgcg cttcgccgat ctggccagac aatctcccga gatcgaaaaa gccgccatcg
     3541 ttaccgatat ccgtgagggc gagggcctta aaaagctgcc ggcgattatc cgggcactga
     3601 agcgtcagct cagcgtgact gtgctgttcc ttgaagcggc ggatgaagtt ttactcaggc
     3661 gattcagtga gacgcgacgg ccccacccgc tgggcaagga ttcaacagtt aaagcagcgc
     3721 ttcaccagga acggcggatg ctgcagccga tccgcaagat cgcagacgta gtggtagaca
     3781 gctctaaatt caacgttcac gagctgcgct cgcacatcac cggcaagttc actcccggga
     3841 acaccgagca ggaaattctg gtatcagtgg tcagttttgg atataaggcg ggtgtgccga
     3901 ccgacgccga cctgctcttc gatgttcgct ttcttccgaa tccgcacttt gtgccggagt
     3961 tccgtccgct caccggacgg catcccaagg tcgccaagta catccgctcc ttcccgcaga
     4021 cgcaggagtt catcgaccgc atctcagagc tcctgatcta cctgatgcct cattacgtga
     4081 gcgaaggcaa gagctaccta accatcggct ttggctgcac cggcggtcag catcgctcag
     4141 tgttgattgc ggaagaggtg aaaaagaggc tcgcgaaggc ggggtatcgg gtcaaggtcg
     4201 accaccggga ctccccaaaa taggcaacat tacttaacgc tctggccttt tttggtctgc
     4261 tgcgggctga gcaaccctcc tttagaataa tgagaatgct ttgcccttcc agcggaggcc
     4321 tatgcgccag ctaaatcggc tgctggttta cctgcgcccc tttttgccgc agttctttgg
     4381 ctcaattctg cttatggcca tggtgggcgc catggaaggt ttccggattc tgctgattgg
     4441 gccgatcatc gatcgcgtgc tcaatccagg aacgcccgga cgttctctga ctctattcac
     4501 catcccagga actgatcaca aggtttacct ccagaacttt gtgccggagc acttccgcaa
     4561 ccccttgacc gtggtggtag tggcgctcat aggcacctcc atcatcaagg gcctttgcga
     4621 ttatctggga acctatctgg tgaattacgc cggttacgga atgatcaccg acgtgcgggt
     4681 caagctttac gacaggattc tgggccgatc aatcgctttt ttctcgcgca attcaaccgg
     4741 gacattaatc tctaccgtcg tgaatgacgt ggagaaaatt caggtcactc tcaccattgc
     4801 gctggcggaa tttctgcagc agttcttcac gctgattttc ttgctcgggg ttgtgattgt
     4861 tttgggcaag aagctggcgc ttgtgctggt gatttttgtt ccattcgtcg tggtgtccgc
     4921 agggaagatt ggccggcgcg tgcgctccac cacgcgtaaa gggcaggaca aactcgccga
     4981 catacagaac atcctgcatg aaagcattac cgggaaccgt attgtcaaag ctttcggaat
     5041 ggagaagtgg gagagcagca agttctttgg cgcggcaaga aggttgtttc gggccaacct
     5101 gaagtcggtt gcggtacagg ccatcagttc accgcttatg gactttatcg gagcgctcgc
     5161 ggtggcgctc ctgctctggg ttggtcgcat gcaggtacgg ggcggggcga tgaccaccgg
     5221 cgtcttcctg gcattcatct tcgccgtctt ccggctttac gatccagtaa gaaagatggc
     5281 tttcttcaac aacagcttcc agcaagcgct gggcgcatcg caggaaatct ttcgcctgat
     5341 ggacgaaacg gaagaaatcc aggaccgccc cggcgcacgg ccgctgcctg cattccgcga
     5401 cagcgtgcgc ttggacaatg tgagtttctc ttacacgggt gcaaacggag gcgagccgga
     5461 aatcctgcgc aatatcgaca tggaaacccg cgcgggtgag attgtggcga ttgtgggatc
     5521 cagcggtgcc ggcaagagca cgctggtcca tctgataccg cggttttttg acgtgacttc
     5581 cggggcaatc acgatcgacg gacatgacat ccgcgacgta acgcttgctt cactgcgtgc
     5641 gcagatcggc attgtgaccc aggaaacaat tctgttcaac gatacggtcc gtaacaacat
     5701 tgcctacggc cagcccggcg ttcccatgga cgccgtggaa gaagcggcca aggccgcgct
     5761 ggcccacgat ttcatcatgc gcttgcccga tggatacaac accatcatcg gcgagcgtgg
     5821 tctgaggctt tccgggggcg aacgccagcg cgtcgccata gcccgcgcat tgctgaagaa
     5881 cgcgcccatt cttattcttg atgaagccac ttcggcgctt gatacggagt ccgaatcgct
     5941 ggtgcaggcg gcgctgcaaa acctcatgag cggccgtacg gtgtttgtga tcgcgcaccg
     6001 ccttaccacg gtgcggcatg ccgaccggat cgtcgtgatt gagaatggcc ggatcagcga
     6061 ttcaggaacg catgaagacc tgctcacccg gctgggaacc taccggaaat tatatgaatt
     6121 gcagtttatg gatttagacc ccaaaatgaa tgaagaggcc gttcgcggca aggtgctgtg
     6181 aaggcgtgac cggcagctca cgaactcatg tccatccgct ccatgacagg ctttgcccag
     6241 gtcaaatccc aggcaggtga cgggatctcc tttacccttt ctgtcaaatc cgtaaatcat
     6301 cgttttctcg atccccagct ccgtttgcct cctgacatgg atgaactgga gatgaagctg
     6361 cggcgcatgc tcaaggagaa gctcgcccgc gggcacgttg aggttacgct ttcggtggag
     6421 cggcgtccag gggaggggtt cagcttcaat cgcgagctgg tgggcggata tgtgaccgcg
     6481 ttccgcaaag cggcggccga gttcggtgct gttggcgagc ccgacctcaa tgtcgccttt
     6541 cgcctgcccg gcgcgctggg tgagacggca tcactcgatg gagatttcca gggcgcggtg
     6601 gtggcggcga tggagcaggc catccagaag ctgaacgtca tgcgcgagca tgagggccag
     6661 ggcatggagc aggagatgcg ccgccggctc aaggtactgg aagaagcaac ggacgaggtg
     6721 tctcaccatg gcggggcagt ctcgcgggcg gtgctggaaa aagtgcgcgc acgcatgcag
     6781 gaactgctgg agaataccaa agccgatgaa gatcgtattc tccaggaagc cgcattgctg
     6841 gccgagcgca gtgacattca ggaagaactg gtgcggctca agacgcacat cgagcacttc
     6901 cgcaagctgc tggaacaggg cggggaagtg ggcaaaaaac tggatttcct gctgcaggaa
     6961 ctgaatcgcg aagccaatac gttgctgtcc aagacctcag gcatcaccgg ggagggactg
     7021 cggatcactg agcttggttt gcgcatgaag tcagagattg agaaatgccg cgagcaggtg
     7081 cagaacctgg aatgagcgga ctccttttca tcatctcggc gccttcgggg tcgggcaagt
     7141 ccaccctggt caatgaggtg cggaagtacg ttgccaatct tgaattttca gtttcttata
     7201 ccacgcgtcc gccgcgcggc agcgagcagg atggccagga ataccatttc gtcagccgcg
     7261 aacaatttga aggcatgatc atgcgcgatg aattcctgga gtacgcagaa gtgttcggga
     7321 gggactttta cggaacatca aaactcgttc tgccagaagc cgcgcggcgc ggcagtgatg
     7381 ttcttctgga catcgacgtg cagggggcga agcaggtaaa agaaaaaata ccagcagcgg
     7441 ttagcatatt tgtgctgcca cccagccggc atgaactgga atcccggctg cgaaaacgca
     7501 gcatgagtga aaa
//
LOCUS       DASQYP010000165         8393 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_27286, whole genome shotgun sequence.
ACCESSION   DASQYP010000165 DASQYP010000000
VERSION     DASQYP010000165.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 8393)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8393)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8393
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_27286"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1404
                     /gene="malQ"
                     /locus_tag="VE783_05225"
     CDS             <1..1404
                     /gene="malQ"
                     /locus_tag="VE783_05225"
                     /EC_number="2.4.1.25"
                     /inference="COORDINATES: protein motif:HMM:NF011080.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004134 - 4-alpha-glucanotransferase
                     activity [Evidence IEA];
                     GO_process: GO:0005980 - glycogen catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-alpha-glucanotransferase"
                     /protein_id="HYX52831.1"
                     /translation="PLSPPGMGNSPYSAISAFAGNPLLISLERLAERGWLAKDRLMGA
                     PAPGDRVNFEEVLSFKMPLLREAAQNFLEGRTGERTRFEQFKKETAWWLEDFVLFDVM
                     RQAHKGATWSSWDKGLARREPEALRDFGIQHQRELEAERAIQFAFFEQWRALHRYCAE
                     RGIKIVGDVAIFVNYDSADVWRNPEIFFLDENLLPAFVAGVPPDAFSATGQRWGNPLY
                     RWDVCQSGGYKWWIQRMSWALTTCDILRLDHFRGFEAYWEIPASEPTAVRGRWVKGPG
                     DDLFRVLRERLGDLPFIAEDLGLITPEVLALRDRIGVPGMKVLQFGFNDPGAHIYLPH
                     KFEPNCVAYTGTHDNDTTPGWWKSAGKEEKQHALEYFGAPEDGMHWAFIRGALASVAR
                     LAIVPLQDVLGLGSDARMNTPSRSDGNWGWRLEPGLLTSQLAQKLAAISEVTDRVPMV
                     SAADQQRYREMREDFAA"
     gene            complement(1351..4362)
                     /gene="treY"
                     /locus_tag="VE783_05230"
     CDS             complement(1351..4362)
                     /gene="treY"
                     /locus_tag="VE783_05230"
                     /EC_number="5.4.99.15"
                     /inference="COORDINATES: protein motif:HMM:TIGR02401.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047470 - (1,4)-alpha-D-glucan
                     1-alpha-D-glucosylmutase activity [Evidence IEA];
                     GO_process: GO:0005992 - trehalose biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="malto-oligosyltrehalose synthase"
                     /protein_id="HYX52832.1"
                     /translation="MRSNPSVLAPESSGISECLDRLAAQKRSIRPLSTYRLQFNAKFG
                     FEQARRLIGYLHALGVSHVYSSPILKARAGSNHGYDITDHNQLNPEVGSYEEFQAFVR
                     ELKNYGMGQVLDIVPNHMGIGFGANPWWHDVLANGRASEFAEFFDLDWNPLKPELRDK
                     LLIPVLGDQYGAELEQGHIKIVCDEQGFHVEYYDKTLPIDAQTIPMIFEPVSSEIHEP
                     ELRNILSGLRNLPLHNTTDGELVRQRRRSIGPLTDALRQLIVKSQDVKELARKAIDHC
                     NGHPGDPRSFDCLHRLLEAQVYRLAHWRVSGEEINYRRFFDINDLIGLRMENPRVFAA
                     THQLLRKMLAEDLIQGVRIDHCDGLLNPRQYLVRLQMLYTASQCSGATPRPPLAENGI
                     EQEVQQVFGQHDWMQNGAPLYTVVEKILEPGEDLPYEWPVDGTSGYDFTTLVNGIFID
                     RRNERFFTNLYHRFIGGATNVDALIYNSKKLIMHASLASEVNVLAHLLDELSLPDRYA
                     RDFTRKALRDVIRETIACFPVYRTYIDERGEITERDRNYINEAVARAKRRNPDKAPAS
                     FDFLRDILLLRHRDGEDRTELHRKKLYFTLKFQQLTGPVMAKGLEDTACYVYNRFVSV
                     NEVGGTPKQFGISTDEFHQGNLKREEHWEFSMLATSTHDTKRSEDVRARLNVLSEMPR
                     TWSSQVLRWRKLNRSRKRVLGDGRTVPDLNEEYLLYQTLVGSWPFDLSSPPAREQYTQ
                     RIREYMNKAVHEAKVNLSWISDDPAYVEALEQFVTRILTPGTRSRPNAFLEQMQAFIQ
                     ATSLFGAVNSLAQRLLMITSPGNPDVYQGTELWDLSLVDPDNRRPVDYELRQKLISDL
                     DRRAEGGKLPELCAEMLANYQDGRPKLWTTMQAMRLRRDRRELFHTGSYVPLHARGSK
                     QEHVIAFAREYNGHVATIVVPRLPYTLSKAGMQLPLGPLWENTEVPVTSKTPEFLENV
                     LTGEKIKVSGTRTLLCSEVFAHFPVALLVSS"
     gene            complement(4483..5628)
                     /gene="lpxB"
                     /locus_tag="VE783_05235"
     CDS             complement(4483..5628)
                     /gene="lpxB"
                     /locus_tag="VE783_05235"
                     /EC_number="2.4.1.182"
                     /inference="COORDINATES: protein motif:HMM:TIGR00215.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008915 - lipid-A-disaccharide synthase
                     activity [Evidence IEA];
                     GO_process: GO:0009245 - lipid A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipid-A-disaccharide synthase"
                     /protein_id="HYX52833.1"
                     /translation="MQFLLSAGEASGDNYGAQLVEALRQLSPGAEFFGMGGERMQAAG
                     CDVQVHAKDVAVVGLVEVLTHLPDIRKRFKNLMAEAARRRPAAAVLIDFPDFNLRLAK
                     ELHTLGVPVFYFVSPQVWAWRTGRVEQIKKYVRKMIVIFPFEQEFYRKHGIDVSFVGH
                     PLAYEPLPAVDRSEFAANFKLDAGKQWIALLPGSRRKEVRQNLPCMLDAAELLAQQGG
                     DFEFLLPVASTLDKEWVRYQLGPAYTRIRLTENAKATVMLSRAAVVASGTATVESALT
                     GTPFVVVYKLSPLTWFLGRRLVSLNTFAMPNLIAGRKIVPELIQNDFSGPNVVRELNT
                     LIPDGPARQQMQADLQQVRDKLRDSHSAEEPAVRAAREILASLTEST"
     gene            complement(5765..7705)
                     /locus_tag="VE783_05240"
     CDS             complement(5765..7705)
                     /locus_tag="VE783_05240"
                     /inference="COORDINATES: protein motif:HMM:NF012869.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HYX52834.1"
                     /translation="MAEEEVLGKAYDSRLMKRLLTYLRPYSWQTIVALTAILLKVVLG
                     PDVIGPYLTAAAIDRYLTAARGTHHFIDRWLSPNAFVGVGQVALIYLVSLGFNFGLEF
                     VQTYLMQWTGQKVMFDLRSHIFRHLQNMHVGFYDKNPVGRLVTRVTTDVDALNEMFTA
                     GVVSIFEDVFILGGIVFVMLRMKWWLALITFAVLPVIFWVTMIFRKSVRESYRRIRVA
                     IARINAYLQEHVTGMVVLQLFNREQRAYRKFDKINEQHMEAFKDAIFAYALYYPVVEI
                     LSTIAIAAVLWFGGLKVLLGTVSLGVVTAFMQYAQRFFRPIQDLSEKYNILQSAMASA
                     ERVFKLLDTPVEIVSPGAPVYVEGKGRIEFDHVWFAYRKVDEEAADLDAAPAQPTGAS
                     SNGHPPASADSSSYDWILRDVSFSIKPGETVAIVGHTGAGKTTIISLLMRFYDIQQGS
                     IRVDGVDIRKMDLKDLRRRFGVVLQDPFLFSGTIENNIRLGSSWITDQQVEAAAASVN
                     VADFIRTLPQGFREPVLERGSTLSTGQKQLISFARALAHNPQILILDEATSSVDTETE
                     LRVRDALTHMVEGRTSVIIAHRLSTIQRADKIIVMHKGKVREIGSHQELLAQRGIYWK
                     LYQLQYKDQEIPAGETNVGADD"
     gene            complement(7811..>8393)
                     /locus_tag="VE783_05245"
     CDS             complement(7811..>8393)
                     /locus_tag="VE783_05245"
                     /inference="COORDINATES: protein motif:HMM:NF014819.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="beta-ACP synthase"
                     /protein_id="HYX52835.1"
                     /translation="RPFNADRDGFVIAEGAWMFVLEDYDHARARGAKIYAEIAGYGST
                     CEAFHRVRLQECGEEPARAIGLAMKEAGISAANVHYVNLHGTSTELNDRIETRALKLA
                     LGDHAYKVPMSALKSQIGHPQGACGAAGLAATLVAMKHSQLPPTINIERPDPDCDLDY
                     VPDPGRKVEIEHAICNCIAFGSKNSALVLRKLA"
BASE COUNT         1700 a         2424 c         2505 g         1764 t
ORIGIN      
        1 ccgctttctc ctccggggat gggaaattct ccttactcag ccatctcggc ttttgccggc
       61 aatcctctcc tgatcagcct ggaacggctc gcggaacgcg gctggctggc aaaagaccgg
      121 ctcatgggcg cgccggctcc cggcgatcga gtgaactttg aagaggtgct ttccttcaaa
      181 atgccgctgc tgcgcgaggc ggcccagaat tttcttgaag gccgcaccgg cgagcgcaca
      241 cgtttcgagc agttcaagaa agaaaccgcc tggtggctgg aagatttcgt gctgtttgac
      301 gttatgcggc aggcgcacaa aggcgcaacc tggagctcat gggacaaggg actggcgcgg
      361 cgtgagcccg aggcgctcag ggatttcggg atccagcatc agcgcgagtt ggaagcggaa
      421 cgggccattc agtttgcctt ttttgagcaa tggcgggcgc tccatcgcta ctgcgccgaa
      481 cgcggcatca agatcgtggg agacgtggcg attttcgtta actatgacag cgcggacgtc
      541 tggcgtaatc ccgaaatctt cttcctcgat gaaaacctgt tgccggcctt tgtggccggc
      601 gttccccccg atgccttcag cgcaaccggg cagcgctggg gcaatccgct ttaccgctgg
      661 gacgtatgcc agtccggggg ctacaagtgg tggattcagc gcatgtcctg ggcgctaact
      721 acctgtgaca tcctgcgcct cgaccacttc cgcggttttg aggcctattg ggaaatcccc
      781 gcctctgaac ctaccgcggt tcgcggacgc tgggtgaaag gtccgggcga cgatctgttt
      841 cgcgtgctgc gtgagcggct gggcgatttg ccattcatcg ccgaagacct cgggctgatc
      901 acgccggagg tgctcgctct tcgtgaccgc attggcgtgc cagggatgaa ggtgctgcaa
      961 ttcggcttca atgatcccgg tgctcatatc tacctgcccc acaagttcga acctaattgc
     1021 gtggcttata cgggcacaca cgacaatgac acgacgcccg gatggtggaa gtctgccgga
     1081 aaagaagaga aacagcacgc gctggaatat ttcggtgcac cggaagacgg catgcactgg
     1141 gctttcatcc gcggagcgct cgcctcggtt gcgcgcctgg ccattgttcc cctccaggac
     1201 gtgcttgggc tcggcagcga tgcgcgcatg aacacgcctt cccgcagtga tggaaactgg
     1261 ggatggcgtc ttgagccggg cctgttgacc tctcaattgg cgcagaagct ggccgcgatc
     1321 tctgaagtta ctgaccgcgt cccgatggtc tcagctgctg accagcagcg ctaccgggaa
     1381 atgcgcgaag acttcgctgc atagcagagt tcgtgtaccg cttaccttga tcttttcgcc
     1441 ggtcagtacg ttctccagaa actccggggt cttggaagtt accggcactt ccgtgttttc
     1501 ccacaatggt ccgagcggca attgcatgcc ggctttggag agggtatacg gcagccgcgg
     1561 cacaactatg gtggctacat gtccgttgta ttcgcgggcg aatgcgatta catgctcctg
     1621 cttgcttccc ctggcgtgca gcggaacgta acttcctgtg tggaaaagtt cgcggcggtc
     1681 gcgacgaagc cgcatggcct gcatggtggt ccagagcttg ggccgtccgt cctgataatt
     1741 cgccagcatt tctgcgcaga gctccggcag ctttcctcct tcagcacggc ggtccagatc
     1801 agagatcagc ttttgccgaa gctcataatc caccgggcgg cgattgtccg gatccaccag
     1861 gctgaggtcc cacaattcgg ttccctgata aacgtcagga ttccccggcg atgtgatcat
     1921 cagcaggcgt tgcgccagcg aattcacagc tccaaaaagc gatgtggctt gtatgaacgc
     1981 ctgcatctgc tcaaggaagg catttggccg gctgcgcgtg ccgggcgtga ggatacgcgt
     2041 cacgaactgt tccagcgctt caacgtacgc gggatcatcg ctgatccagc tcaggttcac
     2101 cttggcctca tgaactgcct tattcatgta ctcgcggatg cgctgcgtgt actgctcgcg
     2161 cgccggcggt gagctcaggt cgaaaggcca tgatccaacc agcgtctggt agagcaggta
     2221 ctcttcattc aggtctggca ccgtgcgccc gtcgcccagt acgcgtttgc ggctgcgatt
     2281 gagcttgcgc cagcgcagca cctgcgacga ccaggtccgc ggcatttcag agagaacgtt
     2341 cagccgcgcc cgtacgtcct cactgcgctt cgtgtcatgc gtggaagtgg cgagcatcga
     2401 gaattcccaa tgctcctccc gcttcaggtt cccctgatga aactcatcag tgctgatgcc
     2461 gaactgtttg ggggtaccgc cgacttcatt gactgaaaca aaccggttgt agacgtagca
     2521 ggcagtgtct tcgaggcctt tggccatcac cggccccgtg agctgctgaa atttcagcgt
     2581 gaaatacagc ttcttacgat gcagctccgt acgatcttca ccgtcacggt ggcggagcaa
     2641 aaggatgtca cgcaggaagt caaagctggc cggcgccttg tccgggttcc ggcgcttggc
     2701 gcgcgcgacc gcctcgttga tgtagtttct atcgcgctcg gtgatctcgc cgcgctcgtc
     2761 aatgtaggtg cgataaaccg ggaagcatgc gatggtctca cgaatcacgt cccgcagcgc
     2821 cttgcgggta aagtcgcggg cgtagcgatc tggcagtgac agctcgtcca gaaggtgggc
     2881 aagcacgttt acttcactgg ccagcgaggc atgcatgatc agctttttgc tgttgtagat
     2941 cagcgcgtcc acgttggtgg cgccgccgat gaaacggtga tacaggttgg taaagaagcg
     3001 ctcattgcgc cggtcaatga agatgccgtt caccagcgtg gtgaagtcgt accctgaggt
     3061 gccgtccacc ggccattcat aaggcaggtc ttctccgggc tccagaatct tctcgactac
     3121 ggtgtatagc ggcgctccgt tctgcatcca gtcgtgctgg ccgaatacct gctgcacttc
     3181 ctgctcaatt ccgttttccg ctagcggtgg ccttggcgtg gcgccggagc actggcttgc
     3241 cgtgtagagc atctggagcc gcaccagata ctgccgggga ttcagcagcc cgtcgcagtg
     3301 gtcaatgcgg accccctgga tcaggtcttc cgcaagcatc tttcgcagga gctggtgcgt
     3361 ggctgcaaaa actcgcgggt tctccatgcg gaggccgatc aggtcgttga tatcgaagaa
     3421 ccgccggtaa ttgatctctt ctccggaaac gcgccagtgc gccaggcggt aaacctgcgc
     3481 ttccaaaagg cgatgcaggc aatcaaagct gcgcggatcg ccggggtgac cgttgcagtg
     3541 gtcgatcgcc ttgcgcgcaa gctccttcac atcctgcgac ttcacgatca gctgacgcaa
     3601 agcgtcagtg agaggtccaa tggagcgccg ccgctgccgg acgagttccc cgtcagtggt
     3661 gttgtgcagc gggagattcc gcaatccgga gagaatgttg cgcaactcag gctcgtgaat
     3721 ttcggagctg actggttcaa agatcatcgg aatcgtctgc gcatcaatgg gcagggtctt
     3781 atcgtagtac tccacatgga atccctgctc atcgcagaca atcttgatgt ggccctgctc
     3841 cagttccgca ccgtactgat cgccgagaac ggggatcaac agtttgtcgc gcagctcagg
     3901 cttcagcgga ttccagtcca gatcaaagaa ctcggcgaac tctgaagccc ggccgttcgc
     3961 cagcacatca tgccaccatg ggttggcgcc aaagccgatt cccatatggt tcggtacgat
     4021 atcgagcacc tggcccatgc cgtaattctt cagctctcga acgaaagcct gaaattcttc
     4081 atagctgcca acttccggat tgagctggtt atggtcagtg atgtcataac cgtgattgct
     4141 tccggcgcga gctttcaaaa tgggcgagga ataaacatgc gatacgccca gcgcgtgcag
     4201 gtaaccgatg agcctccgcg cctgctcgaa tccgaacttg gcgttgaatt gcaatcgata
     4261 agtcgagagc ggacggatgc tccgtttctg ggccgccagg cggtccaggc attcggagat
     4321 gccgctcgat tcaggagcaa ggactgaggg attcgatcgc atgccgttcg ggactgcggg
     4381 cgcacacttc tgccacaacc cttagatgca ggatgagaga cccgtgccgg ggatcgccgg
     4441 ctgttcatca tcgggtatgg gacgaaccgc acccccccgt tcttacgtcg attcggtcag
     4501 agatgccagt atctcgcgcg cggcgcgaac tgcgggttct tcggcgctgt gcgaatcgcg
     4561 gagtttgtcg cgcacctgct gcaggtcagc ttgcatctgt tggcgcgctg ggccgtcggg
     4621 aatcagcgtg ttcaactcgc gcacaacgtt cggaccactg aagtcattct gaatgagctc
     4681 tggcacaatt ttgcgcccgg cgatcaggtt gggcatggcg aaggtattga gagagaccag
     4741 cctgcggcca agaaaccagg tgagcggaga caacttgtat accaccacga acggtgttcc
     4801 cgtcagggcc gattccacgg tagccgttcc gctcgccacc accgcggccc gtgaaagcat
     4861 cactgtggcc ttggcattct ccgtaagcct gatcctggtg tatgccggac cgagctgata
     4921 gcgcacccat tccttatcca gcgtggaggc caccggcaga aggaactcga aatcgccgcc
     4981 ttgttgggcg agcaactcgg ctgcatcgag catacacggc aggttttgcc gcacctcttt
     5041 acggcggctg cctggcagga gcgcgatcca ctgcttgccg gcgtcgagtt tgaaattcgc
     5101 cgcaaactcc gaacggtcca cggcaggcaa aggctcataa gcgagcggat gtcccacgaa
     5161 gctgacgtca atcccgtgct tgcgatagaa ctcctgctca aatggaaaga taacgatcat
     5221 cttccgcaca tacttcttta tctgctccac acggccggta cgccaggccc aaacctgcgg
     5281 gctgacaaag tagaagacgg gaacgccgag cgtgtgaagt tctttcgcga ggcgaaggtt
     5341 gaagtcgggg aagtcaatga gaacggccgc tgcaggcctg cgccgggctg cctccgccat
     5401 caggtttttg aagcgctttc ggatatccgg caggtgagtg aggacttcca ccagtcctac
     5461 cacggcgaca tctttcgcgt gcacctgaac atcgcagccc gcggcctgca tgcgctctcc
     5521 gcccatgccg aagaattccg ctcccggaga aagctggcgc agcgcttcga cgagctgcgc
     5581 gccataatta tctccggagg cctcgccggc ggaaagaaga aattgcattc acgttgatta
     5641 tagggtgggt tggatttcca aagttccgag cgaagcgagg aatccctatg aataccagca
     5701 aagcatgggc gcgacaatgg ggtttcctcg cccgctttgc gggactcggg attacagcaa
     5761 aatctcagtc gtcggcgccg acgttcgtct cgccggcagg aatttcctgg tccttgtact
     5821 gaagctgata aagcttccag taaattccgc gctgcgcgag cagctcctga tggctgccga
     5881 tctcacggac tttgcctttg tgcatcacga taattttgtc ggcgcgctga atggttgaaa
     5941 gacgatgagc gatgatcacc gacgtgcgtc cttccaccat gtgagtaagg gcgtcgcgta
     6001 cccgcagttc ggtttcggta tccacgctcg aggtggcctc atcgagaatg agaatttgag
     6061 gattatgcgc cagcgcgcgc gcaaaggaaa tgagctgctt ctgcccggtg ctcagcgtgc
     6121 tgccgcgttc cagcaccggt tcccgaaaac cctgcggtaa ggtgcggatg aaatctgcta
     6181 cgttcacgct tgccgcggcg gcctcgacct gctgatcggt gatccatgag gagccgagcc
     6241 ggatattgtt ctcaatggtg ccgctgaaga ggaatgggtc ctgcaaaacc acgccgaagc
     6301 gccggcgcag atctttcaag tccatcttgc gaatatccac gccgtcaact cggatggacc
     6361 cctgctgaat gtcgtagaag cgcatgagca gcgagatgat cgtggtcttt ccagcgcccg
     6421 tgtggccaac gatggccacg gtctctcccg gcttgatcga gaacgagacg tcgcgcagga
     6481 tccagtcata gctggaactg tcagcggaag ctggtggatg gccgttgctg gatgcgccag
     6541 tgggctgagc gggagcggca tcgaggtcgg cagcttcttc gtcgaccttg cgataggcga
     6601 accacacatg gtcgaactca atgcggcctt taccttcaac atataccgga gccccgggcg
     6661 agacgatctc aaccggcgta tccagcagct tgaaaaccct ctccgctgaa gccatggcgg
     6721 attgaaggat gttgtacttt tcgctcaggt cctggatggg ccggaaaaaa cgctgagcgt
     6781 actgcatgaa cgccgtaacc acacccaggc tcaccgtgcc gagcagcact ttcaggccgc
     6841 caaaccagag caccgcggcg atcgcgatgg tggagagaat ttccaccact ggatagtaga
     6901 gggcgtaggc aaagatcgcg tccttgaacg cctccatgtg ctgctcattg atcttgtcga
     6961 acttgcggta ggcgcgctgc tcgcgattga agagctgcag caccaccatc cccgtaacgt
     7021 gctcctgcag ataggcattg atgcgcgcaa tggccacgcg aatccggcgg taagactccc
     7081 gcacggattt gcgaaagatc atggtgaccc agaagatcac cggcaggact gcaaaggtga
     7141 tcagcgccag ccaccacttc attcgcagca tgacaaagac aatgccgccg aggatgaaca
     7201 cgtcttcaaa aatcgacact acgccggcgg tgaacatttc gttcagcgcg tccacgtccg
     7261 tggtgacgcg ggtgaccagg cggcctacgg gatttttgtc gtaaaaacct acgtgcatgt
     7321 tttgcagatg gcggaagata tggctgcgca ggtcgaacat caccttctgt ccagtccact
     7381 gcatcaggta ggtctgcacg aattcaaggc caaagttgaa gcccagagag accagataaa
     7441 tcagcgcaac ctggcccacg ccgacaaaag cgttcgggct gagccagcgg tcaatgaagt
     7501 gatgagtacc gcgcgcggct gtgagatagc ggtcaatagc agccgccgtg agataggggc
     7561 cgatcacgtc tggcccgagc accaccttca gcagaatggc cgtgagcgcg acaatggttt
     7621 gccacgagta tgggcgcagg taggtaagca gccgtttcat caaccggctg tcatacgctt
     7681 tgcctagtac ctcttcttct gccatgggta atgaaacttc tattttacag ggatgctcgg
     7741 gcacccccgc ggcgggacat ctgagcgatt cgatgtcgca gagcagtact aagactcgaa
     7801 aagtgcggtc ctaggccagt tttctgagca ccagggccga gttcttcgag ccaaacgcga
     7861 tgcaattgca aatggcgtgc tcgatttcga ctttgcggcc cggatcgggc acgtaatcca
     7921 ggtcgcaatc gggatcaggt ctttcgatgt tgatcgtggg tggaagctgg ctatgtttca
     7981 tcgccaccag ggtggcggcc agtccggcag cgccacaggc gccctgagga tggccaatct
     8041 gcgacttaag ggcggacatc ggcaccttgt aagcgtggtc gcccagcgcg agtttgaggg
     8101 cgcgcgtctc gatacggtcg ttgagttcgg ttgaggtgcc atgcaggttc acgtaatgaa
     8161 cgttagctgc tgaaatgcca gcttccttca tggccaggcc gatggcgcgc gcgggctctt
     8221 cgccgcattc ctgcaatcga acgcgatgga aagcctcgca ggtggaaccg tatccggcga
     8281 tctcggcgta gatcttggcg ccgcgcgccc gcgcgtgatc gtaatcctca agcacgaaca
     8341 tccaggcgcc ttcggcgatc acgaagccat ctcggtcagc attgaaaggg cgc
//
LOCUS       DASQYP010000166         2468 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_222898, whole genome shotgun sequence.
ACCESSION   DASQYP010000166 DASQYP010000000
VERSION     DASQYP010000166.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 2468)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2468)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2468
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_222898"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1712)
                     /locus_tag="VE783_05250"
     CDS             complement(<1..1712)
                     /locus_tag="VE783_05250"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52836.1"
                     /translation="MNSGPHPDCPEEKVLQEIAAEARPADAYAENVLHHAAQCPHCGP
                     ILSQYLAEFSDQPVPELQALNQNEETAWQNALARELANKSRPKSAPPLPERDRNVLRF
                     PVWARITAWAAPIAAVVVMAVFWGPGLYGKYELKKANDLVAADYAKHRTTLMKLPGVP
                     HGDYMPAIHELGSDTNSLGLNRPDLVKANGILADHQNTNSPAWTRVEGRIALLKGAEG
                     LKQAEDAFDRAKAEGMNDPGLEIDLAVTYFERDSRSDNPNLAQTIDLLNHVLKSPKLT
                     AEQRNTALFDLAIAYEKSNMLDMAADTWTEYLKADTNTSGGWYKEAQQHLTDLKKRLP
                     PPRAADFRQPGYLLRHLDDPEVQNDIEQFQDFALAHWLPDAFRNPGSDSARAIHAIAD
                     LMEKQHGDTWWRDFLRSTTAEDLPAIEAASAAFLSSENDLHSRALQNAQAAAGMFQKS
                     SNSPGTLMAKFAQVYALQRSLSAQECVKEGASLADSVQEKNYPWLRANVALERAVCAT
                     LVSESENTGQFIEIGKSIAKEHSLPELRMRALGLDVSMRTRNGDAGVGWKESVESLGT
                     YFRG"
     gene            complement(1948..>2468)
                     /locus_tag="VE783_05255"
     CDS             complement(1948..>2468)
                     /locus_tag="VE783_05255"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52837.1"
                     /translation="IFKTLTGRAIQNPLPANPIQLVDDLVQDAFRRLTNNDCRPLREL
                     EWRHEKALIGLLRATASTAALDFLRKIDADRRAVDKEVSLETPGVEAVSATPFTRDIE
                     HKVLLQQLARCLESVLKGEEGLRRSVAMFLLYFGHKVTAMEISRVYKLDVRVVENTVA
                     RLARVARARCIN"
BASE COUNT          482 a          718 c          708 g          560 t
ORIGIN      
        1 tcgccgcgaa agtaagttcc caggctttcg acactttctt tccatcccac gccggcgtca
       61 ccatttctgg ttcgcatgct cacgtcgagt cccaaagcgc gcatacgaag ttcggggagt
      121 gaatgttcct ttgctataga cttcccgatc tctatgaact gtcctgtatt ctcggattct
      181 gatactaggg ttgcacaaac cgcccgctcc agcgcgacat tcgcgcggag ccatgggtag
      241 ttcttttctt gcacagaatc ggctaaggag gcaccttcct tgacgcattc ctgggcagac
      301 aagcttcttt gcagcgcata gacctgagcg aatttcgcca tgagcgtgcc ggggctgttg
      361 ctactcttct gaaacatgcc ggcggctgcc tgcgcatttt gcaatgcgcg ggaatgcaaa
      421 tcattctcag aactcaaaaa ggccgcgctg gcggcctcga tggcgggaag gtcttcggct
      481 gtggtacttc ggagaaagtc gcgccaccag gtatcgccgt gctgtttctc catcaggtcg
      541 gcgatcgcgt ggatcgctct ggcggaatcg ctgccgggat tgcggaaggc atccggcagc
      601 cagtgcgcaa gagcgaaatc ctggaactgt tctatatcgt tttgtacctc ggggtcatcc
      661 agatggcgaa gcaggtagcc cggctggcgg aagtcagcgg cccgcggcgg cgggagtctt
      721 tttttcaggt cggtcaggtg ctgctgcgct tccttgtacc agccgccgga agtgttggtg
      781 tccgccttga gatattcggt ccatgtgtcc gcagccatgt cgagcatgtt gctcttctca
      841 tacgcaatcg ccagatcgaa gagcgctgtg ttgcgctgct cggcggtgag tttgggactt
      901 ttcaggacat gattgagcag gtcgatggtc tgagcgaggt tcggattgtc actgcggctg
      961 tcccgctcaa agtaagtaac agccagatcg atctcaaggc cgggatcgtt cattccctcg
     1021 gctttggcgc gatcaaaagc gtcttccgcc tgcttgaggc cctcggcgcc cttcagcagc
     1081 gcgatccggc cttccacccg ggtccaggct ggggaattgg tgttctggtg atcagcgagg
     1141 atgccattgg ctttgaccag atcaggccga ttcaacccaa ggctgttcgt atcggatcca
     1201 agctcgtgga tggcaggcat gtaatcgcca tgcggaacgc ccggcagctt catcagagtg
     1261 gtgcgatgtt tcgcgtaatc tgccgcgaca agatcgttcg cctttttcaa ctcatatttc
     1321 ccgtacagcc ccggccccca aaaaacggcc atcaccacca cggccgcaat cggcgcggcc
     1381 caggcggtaa ttcgcgccca caccgggaaa cgcaagacat tcctgtcgcg ttccggcagc
     1441 ggaggcgcag atttagggcg gctcttattc gccagctcgc gagccagcgc attctgccac
     1501 gcagtttctt cgttttggtt cagcgcctgc agttcaggca ccggttggtc agaaaactcg
     1561 gccaggtact ggctcagaat gggaccgcag tgcgggcact gagcggcatg gtgcaggacg
     1621 ttttctgcgt acgcatcggc aggccgcgct tctgcggcaa tttcctgcag caccttctct
     1681 tcagggcagt ctggatgggg accggagttc ataccgtcac tctccaggaa ttgaagctga
     1741 gtgcgctgcc aatgaagcag gcgtgcaagg cagtcctggc actcggagag atgggtttcc
     1801 accggagacg gagcggtacc gggcggacca ctggcgcatt gcctgatctc ttcttccgat
     1861 agatgtgacc tttgctcgct caccggctct tttctctctc tgtattcaac caacgcagtg
     1921 ttacgggctt accctaagcc tgaactctca attaatacag cgggcacggg ccacccgcgc
     1981 cagtcgagcg acggtgttct ccaccacccg gacatccagt ttataaacgc gggaaatctc
     2041 catggccgtg accttgtgcc cgaagtaaag gaggaacatg gccacactgc gccgtaaacc
     2101 ctcttcccct tttagtaccg actccaggca gcgggcaagc tgctgcagca ggaccttgtg
     2161 ttcaatgtca cgagtaaaag gagtggctga gacagcctcc accccgggtg tttccagcga
     2221 aacctctttg tctaccgccc ggcggtcggc gtcaatcttc cgcagaaaat cgagtgcagc
     2281 agtggaagcc gtggctctca gcaagccaat cagggctttt tcatgacgcc attcaagctc
     2341 gcgcaagggc cggcaatcat tattcgtgag gcgccgaaag gcatcctgta ccagatcgtc
     2401 aaccaattga attggatttg ccggaagcgg gttctggatc gcgcgcccgg taagcgtctt
     2461 aaaaatca
//
LOCUS       DASQYP010000167         4477 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_222910, whole genome shotgun sequence.
ACCESSION   DASQYP010000167 DASQYP010000000
VERSION     DASQYP010000167.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 4477)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4477)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4477
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_222910"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1796)
                     /locus_tag="VE783_05260"
     CDS             complement(<1..1796)
                     /locus_tag="VE783_05260"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52838.1"
                     /translation="MSNSARNSLLIALFLLAVPVMNFGQAASGTPPFSDITGSPDKVD
                     LGNLNVHMDFPVFNKNGRGLPFSFGLGNDSSLWVPVASGSSTFWEPLNTFGWVGSGTN
                     IGTIGYTLITGAGFFEYCFFTYFDGFGTAHVFPGCAAVSGGVDFPLQTTTLDGSGYAL
                     AADACGILQNNTCFLVFTLTTVDGSSIIPQNATPVNGGSGAASGSIIDRNGNQITANT
                     NGTFTDTLGTIALTNTGGFPPNPNNLNPPPAPSPYVMSYTSPAGTAASATLTYRLYRL
                     ESNFGCSGIVEFGQSTSYQNYFPDRITLADGSFYQFTYEPTPGFPSSITGRLASITLP
                     TGGRITYTYSGGHNGIFCSDGSTAGVTRTTPDGTWTYSRTQGSGAASTTTVTDPQGNQ
                     TVIQFQGIFETQRKSYQGNSSTGTLLQTTNTCYNGAAVPCTATAITLPIASKKVVTQA
                     GTSTQQSQKTFSYNSTYGVPLEEDDYDFGPGAPGALLKKTVFTYASLGNVHSKPKTVT
                     IYGTGTTPVAQTTYGYDETAVTATNGTPQHVNIGAAVRGNVTSTTSLVQGTATLRKTT
                     TYFDTGNPNVQTDVNGAQTTYAYGTGSCGNSFP"
     gene            complement(1820..2485)
                     /locus_tag="VE783_05265"
     CDS             complement(1820..2485)
                     /locus_tag="VE783_05265"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52839.1"
                     /translation="MTDVTLMGIAERISGSDDETGRATLKALATGEESIELMFPSGTR
                     REVRSGAGATREGHWSAADGVWHSVQEHNLKAEGVWFSPTLLLSQALADKTKAFQHLG
                     TSVIEGQSLEHIRAHHGSPVIPAKAPEQVARLTQHLTEVDLYLDPVSALPLKLTFNEH
                     PDNDASRDIPVEIRFSDYRPVNGAQVPFRLQKFINGTLLLDIRVEQAILNSNLPASTF
                     TVQ"
     gene            3198..>4477
                     /locus_tag="VE783_05270"
     CDS             3198..>4477
                     /locus_tag="VE783_05270"
                     /inference="COORDINATES: protein motif:HMM:NF015734.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PASTA domain-containing protein"
                     /protein_id="HYX52840.1"
                     /translation="MTKSNQSAPVTTSGSHVYLRPRTKAWLLGIGLALMIAASVTAVL
                     QPLNPDPQGSSFAGWAWYPHETNPVARLQQVSCSKPYACQLNSVAINGESELPEIWAV
                     GNVGLVLHRPAGQTKWEQLTVSAKEESVTAPPPSPKPRPAPNPAPTAAPVKTPSSAVV
                     PNLVGLSQAEAEKAAYAAGFNIQVDYGAGTNPMAQQQVGPLRVLRQSPEPKTSAPPKS
                     TIKITLGAVPRSAAQLIWDKIFPTVYAAEPVGKAPGKRPPQAQQQESHGRMVPDKTPD
                     KQPDRAHNISGMAKPVVISPVLDDLILATCYTDRGCRIVGRSGRIYKPQSPTEWTFVQ
                     GRFVVSDSAASGSYPGTEPGLPAEAVLQSTSIGKLYASKKNGFFNCESYKGNEVFSAK
                     PVFGCTTGKDPAVPNATAPQNVVIKVPTTATTRAV"
BASE COUNT         1000 a         1201 c         1304 g          972 t
ORIGIN      
        1 gggaaggaat taccgcagga ccctgtgccg taagcgtaag ttgtctgcgc tccattcacg
       61 tctgtttgca cgttcgggtt accggtatca aagtaagtgg ttgtctttcg aagagtcgct
      121 gttccctgaa ccagcgaagt cgtgctcgtt acgtttcccc ggaccgcggc tccgatattt
      181 acatgttgcg gagtgccgtt ggtcgcggtc actgcagtct cgtcataacc ataagtggtc
      241 tgagctactg gagtggttcc cgttccgtaa atggttacgg ttttcggctt ggaatgcacg
      301 ttgcccagag acgcgtatgt gaagaccgtt ttcttgagca aagctccggg cgctccaggg
      361 ccaaaatcat aatcatcctc ttccagcggc acaccgtatg tggagttgta ggaaaaagtt
      421 ttctgcgact gttgcgtgga tgttcccgcc tgcgtgacaa ctttcttgct cgcgatggga
      481 agggtaatcg cagttgcggt gcaggggacg gcagcaccgt tgtagcaggt gttggtcgtc
      541 tgcaacaaag tgcccgtcga ggagttgccc tgatacgatt ttctctgcgt ctcgaagatt
      601 ccctggaact gaatcaccgt ctggttcccc tgcggatcag tgaccgtcgt ggtggaagct
      661 gctcctgaac cctgagtgcg gctataagtc cacgttccat caggggtggt acgcgttacg
      721 ccggcggtgc tgccatccga acagaagatc ccgttgtgtc ctcccgagta ggtgtaagtg
      781 atccttccac ctgtcggcaa agtaatggac gcaagacggc ccgtgatgct gctgggaaat
      841 cccggagttg gttcgtaagt gaactgatag aagctgccat ccgcgagcgt aatgcgatca
      901 gggaagtagt tctggtaaga cgtgctctgg ccgaactcga cgatgccgga gcagccaaag
      961 ttggactcga ggcggtacag cctgtacgtc agcgtcgccg aagccgcggt gccggccggc
     1021 gaggtgtacg acatcacgta gggcgatggg gctggcggag gattcagatt gttcgggttc
     1081 ggggggaatc ctcctgtgtt ggtcagcgct atggtcccaa gcgtatccgt gaaggtcccg
     1141 ttcgtattcg ccgtaatctg atttccgttg cggtcaatga tgctgcctga agctgcgccg
     1201 gacccgccat tcaccggcgt cgcgttttgc ggaatgatac tgctgccgtc aactgtggtg
     1261 agcgtgaaaa ccaggaagca ggtgttgttc tgcaggatac cgcaggcatc tgcggccaga
     1321 gcgtagccac tgccatccag agtggtggtt tgcagcggga aatccactcc tccgcttact
     1381 gccgcgcatc cgggaaatac gtgagcagtc ccgaagccgt caaagtatgt gaagaagcaa
     1441 tactcgaaga aaccggcgcc ggtgatcagc gtgtagccaa tggttccgat gttcgttcct
     1501 gagcccaccc agccaaaagt attcaatggc tcccagaatg tagaactgcc tgaagcgacg
     1561 ggcacccaaa gagaggagtc attccccagg ccaaaactga acggcaggcc gcgtccattt
     1621 ttgttaaaga ccgggaaatc catgtggacg ttcaggttgc cgagatcaac cttgtccggc
     1681 gagccggtga tgtcactgaa gggaggcgtg cctgacgcgg cctggccgaa gttcatgacc
     1741 ggaacagcaa gtaaaaacag agctatgagc agggagttgc gcgcagaatt cgacatgagt
     1801 ttttcctcgc tgagcgttgc tattgcaccg tgaacgtgct ggccggaagg ttggaattca
     1861 agatggcctg ctctactcga atgtcgagaa gcaatgtgcc attgataaat ttctgcagac
     1921 gaaagggaac ctgtgctcca ttcaccggtc ggtaatcgga aaagcggatt tcaaccggaa
     1981 tatccctgga agcgtcattg tcaggatgtt cgttgaacgt gagtttcagg gggagagcgg
     2041 aaaccggatc aagatagaga tcaacttcgg tgagatgttg cgtcaggcgg gccacctgct
     2101 cgggagcttt ggccggaata accgggcttc catgatgcgc ccggatatgt tccagggact
     2161 ggccttcaat cacagaggtc ccaaggtgct ggaaagcctt cgtcttgtct gcgagggcct
     2221 gtgaaagcag cagcgttgga gaaaaccata cgccttcagc cttcaggttg tgctcctgca
     2281 cactgtgcca gacgccgtcg gcggcgctcc aatggccttc acgggtcgcg cctgctccgg
     2341 agcgaacttc gcgccgcgtg ccggagggga acataagctc gatgctttct tcacccgttg
     2401 ccagcgcctt gagtgttgcc cggccggttt cgtcatcaga accggagatg cgctccgcaa
     2461 ttcccatgag cgtaacgtca gtcacaggcg ttcctcccgc caaggcagag agagaactct
     2521 ggagcctcgt tgcggcttgt gttgcgccag gatcagaaga gggtgaatga ctgacttgtg
     2581 ccgagaaaag agcggagcaa agagcggtga ctatcaggca gccggcgaag cgacgaaaca
     2641 tgtacaacct ccgagcttgt agcgtcaaca acagagccgg ctttgtacat tgctgattat
     2701 gctaagtcaa gaaaaagacg attcagttca tgttcggata gatcgcgcgc ggtgcgttaa
     2761 atcactcagc gatcgaaaat tgcttcacta aaacattcca gagtagctga ttcacttgct
     2821 ggataagtaa gagaacgctc gatatagaat cacaattgtc gggcgttcca aaatgggaaa
     2881 tgcgatgtaa atttttgtgc gcgcggaatt tttgtttctg gtgtttcatg cgattgcgca
     2941 tccagcagcg atgcgaacga ctcaacgaat gctggtcatc ttaagagcgg tggtatgact
     3001 tgcggctagg ttcggtccct gtcatgaacc tgtttaggag ggagtttcgc tcgcacgtcc
     3061 gatggttcct tagaggaaaa ccaaacttca ggcgccggcg ctttcccgtt gccaagccca
     3121 atcaaaatgc actaaagtgc ccgacacgtt cggcccagaa tcctcactat agaacagatg
     3181 ctgtcgagag tccgcccatg accaagagca atcagtccgc tcctgtcacc acttctggtt
     3241 cgcacgtgta tctgcgtccc agaacaaaag catggcttct ggggattggc ctggctctga
     3301 tgattgccgc ttccgtcact gcggtcttgc agccactgaa tcctgatccg cagggctcaa
     3361 gcttcgccgg gtgggcgtgg tatccgcacg agaccaatcc tgtggcgcgt cttcagcagg
     3421 tttcctgttc caaaccgtat gcttgccaac tcaacagcgt ggcaatcaat ggggaaagtg
     3481 agcttccgga gatatgggcg gtcggcaatg tcgggctggt gctgcatcgc cctgcgggcc
     3541 agacaaagtg ggagcagttg acggtgagcg ccaaagagga gagcgtgact gcgcccccac
     3601 ccagtcccaa acctcgcccg gcgccgaacc ctgcgccaac tgctgcgccg gtcaaaacac
     3661 cttcgtcagc cgtggttcca aatctggttg gtttgagcca agccgaggcg gaaaaggccg
     3721 cttacgctgc gggtttcaat atccaggtcg attacggcgc aggcactaac ccaatggccc
     3781 agcagcaggt ggggcccttg cgtgtgctca ggcaatcgcc ggaacccaaa acttctgcgc
     3841 caccgaaaag cacaatcaaa atcaccctcg gcgcagttcc aaggtccgct gctcaactta
     3901 tctgggacaa gatctttccc acagtctatg ctgcggagcc agtggggaaa gcgccgggaa
     3961 agagaccgcc gcaggcgcaa cagcaagaat cccacgggcg catggtgccc gataagaccc
     4021 ccgataagca gccagacaga gcacacaaca tctctggaat ggcgaagcct gtcgtcatct
     4081 caccggtgct cgatgatctg atcctggcaa cctgctacac cgaccggggc tgccggatcg
     4141 tcgggcgcag cgggcgaatc tacaagccac aatcaccgac tgagtggaca ttcgtacagg
     4201 gccgttttgt tgtttccgat tcagccgcca gtggaagcta tccaggaact gagccggggt
     4261 taccggcgga agcagtgctt caaagcacct ctattggaaa gctctacgcc tctaagaaaa
     4321 atggcttttt taactgcgaa tcttacaaag ggaatgaagt tttttctgca aagccggtct
     4381 ttggctgcac caccgggaaa gaccccgccg ttccgaacgc taccgcaccg caaaacgtgg
     4441 ttatcaaggt tccgactacg gcaaccactc gcgctgt
//
LOCUS       DASQYP010000168        15578 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_27370, whole genome shotgun sequence.
ACCESSION   DASQYP010000168 DASQYP010000000
VERSION     DASQYP010000168.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 15578)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15578)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15578
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_27370"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..220
                     /locus_tag="VE783_05275"
     CDS             <1..220
                     /locus_tag="VE783_05275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013352894.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="Fe-Mn family superoxide dismutase"
                     /protein_id="HYX52841.1"
                     /translation="KTRSGEFKVTSTPNQDNPMSNGEFPIMGNDVWEHAYYLNYQNRR
                     PDYLKAWWNVVNWDEVNKRLSQADSFFR"
     gene            343..2820
                     /locus_tag="VE783_05280"
     CDS             343..2820
                     /locus_tag="VE783_05280"
                     /inference="COORDINATES: protein motif:HMM:TIGR03434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HYX52842.1"
                     /translation="MGTAFRDLRHSLRSLYKAPGVALLAVLILALGSGGNVAIFSIVD
                     VLLFRPLPVSNPDQLVRIFTGKTKGDARAGFVSLPDYEEYRDNAPAFSGIAACLDRFP
                     ANVSAAKFGSERVNVGMVTGNYFPLLGVHASLGRTLVPDDERTDASPVALLSHSFWKR
                     HYASDAKVLESQILVDGQWFTIAGVVPADFGGVSFENFPELWIPLAQGRNLDPLLKTQ
                     LPLNHRSFAPFVVIGRLRTGISLAQAQVQLDTMAARLGAGKPIAEEGNFQRAWPVLVS
                     ATQAARKSNQQTSWLLLGIVILVLLIACADVAGLMLARSETRQREFAVRIALGAPRSR
                     LLVLHFYEALLISAAGAVIGLLIAAASTRIIALSAPAAIDLPLQRSSSILDVRVLAFT
                     IAVSLLTALISAMVPALRYSRSDLALEVKTDSRRSSAIGRSWSIHTALVLAQIASAVV
                     LLAAAGLLARTLWQASKIQLGFSPANTVFGSTDLIRQGYTKEQAASLLAPLLQALRAQ
                     PGVQSAALGAPPLQFTMQTMVKIEGAQSGDAEKQSIALVRVSDGYFDTTGIPLPSGRD
                     FRPSDGATAPGAAIVSQSFAHKWWPDKSAIGMHLSHAGIHDQTFEIVGVVGDTAGADP
                     RQDDPAVVYLPLEQSYLMFPWQPDVTLIAHGARREADLISSLRRAVVEIDPALPLFRV
                     RTLDQQVSAILGEEKFLARLLIVFTCVAVVLAAAGLFGLMAYTTARATHEFGLRMALG
                     AQKSHVLWMVLRRALILSGVGLAIGLGGAHWLSRYLNGLLFNVSRNDLATFVVVPVAT
                     ILVALLASFVPALRATSVDPLVALREE"
     gene            complement(2831..3175)
                     /locus_tag="VE783_05285"
     CDS             complement(2831..3175)
                     /locus_tag="VE783_05285"
                     /inference="COORDINATES: protein motif:HMM:NF013868.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043856 - anti-sigma factor antagonist
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="STAS domain-containing protein"
                     /protein_id="HYX52843.1"
                     /translation="MDSSELRIEDVHGPREGQRVLRLNGPLVINNFFDFQRMIREDQS
                     KALIIDFSNVPYVDSAGIGALVGAYVSGQKTGRSLTLVSVSDRIRTALRQTKVDQFFS
                     FAENLSAATAGK"
     gene            3416..4618
                     /locus_tag="VE783_05290"
     CDS             3416..4618
                     /locus_tag="VE783_05290"
                     /EC_number="2.3.1.9"
                     /inference="COORDINATES: protein motif:HMM:TIGR01930.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA C-acetyltransferase"
                     /protein_id="HYX52844.1"
                     /translation="MAQTTDIAIVSGARTPMGRYCGKLRDFTAMELGAIAAQEAIRRS
                     GVEAKEFDHAVFGNAQQTSGDSLYGARHVALKAGLPIETPALTVNRICGSGIQSLVNA
                     AQMIQLGEASTVLAGGIESMSQAPHVVRGARWGFGLGEGKMEDSLMVALLDTYCGLYM
                     ANTAELYAEQQGITRQMMDEFALQSQQKAGAAQQACRLAEEIAPVPLRNRKGEPTGEM
                     FEKDDHLRPDTSMENLAKLKPAFGKNGTVTAGNASGIVDGGAAVVMTTLDQAQKRGIK
                     PMGRIVSWGIAAVEPKIMGSGPVPSSRAALKKAGLTLNDIDLIEVNEAFAGQYLAVEK
                     ELGLDRSKVNVNGGAIALGHPLGATGTRLVITLLFELRRRKAKYGLATACIGGGQGIA
                     MIVENLQR"
     gene            4809..5699
                     /locus_tag="VE783_05295"
     CDS             4809..5699
                     /locus_tag="VE783_05295"
                     /inference="COORDINATES: protein motif:HMM:NF005875.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyacyl-CoA dehydrogenase family protein"
                     /protein_id="HYX52845.1"
                     /translation="MAIKKVGVLGCGLMGSGIAQVSATAGYDVVVLEQEQKFLDKGFA
                     GIEKSLAKFAEKPDKTGVTPELAKQARARIAGTTNREDLADCDIIIEAIIENVEEKKK
                     MFSALDGIVKQDGIFASNTSSISITEVAAATKRPDRFIGLHFFNPVPLMKLVEVVRTI
                     ATSDDVFETSFNFGKSLGKVPVRTSDKTGFIVNRLLVPYLLDAIRSYEEGVGSIPDID
                     NAMKLGCGYPMGPFTLLDFVGLDTTYYITHVMFDEFRERRFASPALLKRLVMAGWYGR
                     KTGRGFYDYSDPNNPVAQRF"
     gene            5705..6115
                     /locus_tag="VE783_05300"
     CDS             5705..6115
                     /locus_tag="VE783_05300"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52846.1"
                     /translation="MRWPWIVVTAAVLEGVVGLALLGTAAVMVVAARTAASLDFAEGT
                     AAGILGAIGLVVLTSCAGMLKRKSWGWWLAEAANLVGLVVFVWDPLTRRVPDTDEVAF
                     IVLLGVLLLVLLLAPVRDSFLQKKENVAVTNAKT"
     gene            6175..6957
                     /locus_tag="VE783_05305"
     CDS             6175..6957
                     /locus_tag="VE783_05305"
                     /inference="COORDINATES: protein motif:HMM:NF012596.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase-related protein"
                     /protein_id="HYX52847.1"
                     /translation="MALENVKFEKKTKIAYVTIDRPKVLNALNMATMEELEQVFTELA
                     ADADTRVVILTGGGEKAFVAGADINELSKNNPVEAKAYTHRGQAVLDLIENLGKPVIA
                     CINGFALGGGCEIAMACTMRLASENAKLGQPEVKLGIIPGYGGTQRLPRLVGKGLAMQ
                     MVLTGDMISAQEAHRIGLVNEVVPADKLIPRAEEIAGKIIGMAPLAIQYCMEAVNQGM
                     NMSLQDGLFLEATLFSICCATDDKNEGTRAFLEKRAANFQGK"
     gene            6964..7812
                     /gene="ribH"
                     /locus_tag="VE783_05310"
     CDS             6964..7812
                     /gene="ribH"
                     /locus_tag="VE783_05310"
                     /EC_number="2.5.1.78"
                     /inference="COORDINATES: protein motif:HMM:NF013081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009349 - riboflavin synthase complex
                     [Evidence IEA];
                     GO_function: GO:0000906 - 6,7-dimethyl-8-ribityllumazine
                     synthase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="6,7-dimethyl-8-ribityllumazine synthase"
                     /protein_id="HYX52848.1"
                     /translation="MIKGITAIQKIERRSDFETLVELFSALGFEPGTGWKTAKSEGSP
                     FLAPIGNLELVNGDAPPHTNLWVEVTDLDSVREFFRHKKIKPSVEVYDTDWGSRAFVV
                     EPVKKLKIAFWQPNRPKANAIEGDLSATGMRFALVVARWNSFITERLLQGALNALRRS
                     GCKEQDITVVRVPGSFEIPSEARTLAETGSYDAIITLGCLIRGETTHYEHIATEVTRG
                     IGQSAQQTGVPHTYGVLTCENLEQAIDRAGLKAGNKGHEAAISAIEMVSLKRKTRGMA
                     SKSRAT"
     gene            7815..8249
                     /gene="nusB"
                     /locus_tag="VE783_05315"
     CDS             7815..8249
                     /gene="nusB"
                     /locus_tag="VE783_05315"
                     /inference="COORDINATES: protein motif:HMM:TIGR01951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription antitermination factor NusB"
                     /protein_id="HYX52849.1"
                     /translation="MGTRRKSRELCLQMLFQWDMGKQPPDLVQKTFWAERGEVDEETR
                     GFADDLFHVAVERQAEVDDLIQKHAPNWKIERMAAVDRNLLRTGVAEFIAYPQTPKPV
                     VINEALEIARRFSAPESVQFINAVLDAVGKDLATTAAPGRLK"
     gene            8333..9370
                     /gene="purM"
                     /locus_tag="VE783_05320"
     CDS             8333..9370
                     /gene="purM"
                     /locus_tag="VE783_05320"
                     /EC_number="6.3.3.1"
                     /inference="COORDINATES: protein motif:HMM:TIGR00878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004641 -
                     phosphoribosylformylglycinamidine cyclo-ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine cyclo-ligase"
                     /protein_id="HYX52850.1"
                     /translation="MKKSSITYADSGVNIDRADRAKQRIKYLAHRTFTKGVVSEIGGF
                     GGMFSLDKKKFRDPVLVSSVDGVGTKLKVAFMMGIHHTVGGDLVNHCVNDIAVQGAAP
                     MFFMDYLATGTLEPEIAEKIVEGIADSCRHNGCALIGGETAEMPGFYPEGEYDLAGFI
                     VGAVDRSKIITGENVQAGDVLVGLPSNGLHTNGYSLARKLFFEVAKYTPDTYINDIHG
                     KAGAELLKTHKSYWPVLRKLIDAEVVHAMAHITGGGITDNLPRVLPKGTAAIVEMGTW
                     PILPVFSHMQKIGNVPQDDMMRTFNMGIGMVLVVPAKKFKRVQSLIEKCGEKSFLIGR
                     IVKGERKVLYA"
     gene            9372..10004
                     /gene="purN"
                     /locus_tag="VE783_05325"
     CDS             9372..10004
                     /gene="purN"
                     /locus_tag="VE783_05325"
                     /EC_number="2.1.2.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR00639.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004644 - phosphoribosylglycinamide
                     formyltransferase activity [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylglycinamide formyltransferase"
                     /protein_id="HYX52851.1"
                     /translation="MARLPRLGILLSGRGSNFEAIAESIATGRLQAEITIVISNRTDA
                     AGLDSAKRRGLNAQLIPSKGRVREEHDAEVIAALKAAQVDLVCLAGYMRLLSPEFVRA
                     FAHRILNIHPSLLPAFPGLDSQKQALEYGAKITGCTVHFVDEHLDHGPIVLQKPVPVL
                     EGDDEHTLSARVREQEHIAYTEAIRLVLSGQVEIQGRRVVRRSKAEHAQS"
     gene            9991..10422
                     /locus_tag="VE783_05330"
     CDS             9991..10422
                     /locus_tag="VE783_05330"
                     /inference="COORDINATES: protein motif:HMM:NF012895.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52852.1"
                     /translation="MLKVKLLNSSGKVPTVAHPGEDLGYDIYAATMVIIPQRSHAVVS
                     TAIAIECTSPDGEPMGALLRDKSSMASRRLVLTGGVIDAGYRGEIKVLMENLGDTDAV
                     IKAGDKIANLIPYPVLTGEVQVVKELTESSRKAGGFGSSGR"
     gene            10452..11420
                     /locus_tag="VE783_05335"
     CDS             10452..11420
                     /locus_tag="VE783_05335"
                     /inference="COORDINATES: protein motif:HMM:NF012512.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine/serine dehydratase"
                     /protein_id="HYX52853.1"
                     /translation="MVTLLDIEAARELLRGIAVRTPLVRCTLPDGTPIQIKPENLQPI
                     GSFKLRGAYNKINSLTPEERLRGVVAHSSGNHAQGVAYAARALSVKATIVMPSNAPRI
                     KMKATRDFGAEIVEVGPAGNDRIRRAGELERERGLVPVPPYNDEKIIAGQGTLGLEIL
                     EDAPEVDLVLVPVGGGGLISGVATAIKESHPGVKVVGVEPTCASDAQASFRSGRIQTV
                     AAEQAIQTLADGLRSQSIGPINFEHIRQYVDDIITVSDDELKQAMRHLLFSARILAEP
                     SGAVTTAAAMFHRHELPPAKNIVAVVSGGNIEPDLFFQIMNGNQPQ"
     gene            11438..12328
                     /locus_tag="VE783_05340"
     CDS             11438..12328
                     /locus_tag="VE783_05340"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52854.1"
                     /translation="MRLALAFLCCALSAAAADREHATPIREMGVAQQPGGSQSVAQIE
                     RGRDLVILARSSAGNDMWLQVTALAQPGTPQQETTGWVPAKLAISASVPNAEEIIYGA
                     AVDSEIEAEKPKGRRSAADDALRLYQRTAQFFPDSDSGHEALWRSADIQWQLDRARKR
                     KPIAETAMQNVIQRLPGSRYADLAAYALLENQLCGDWKGQAACPAQEAEIYERYAREH
                     PHSPRAAEALYNAAWRIGVVADIYRVRNNKEQSTASRDRALALARELSNQFPQAEWKY
                     RAETLVYKLEKNIPLYGTSE"
     gene            12312..13286
                     /locus_tag="VE783_05345"
     CDS             12312..13286
                     /locus_tag="VE783_05345"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52855.1"
                     /translation="MERRSNGMAGLRKLAITVSCVLSLFIAGAAHAADKEHGTVIGDA
                     DIYVSPDTTAQRIGHASRGRDIFLMGRSKIDNKDWAHVLATIQEGLLQPREISGWVDG
                     RLVVTVSTPNGDQIIYGEAVDSEHQQELRGGRPKADQDAMRLYYRLYEYFPASPLAGE
                     ALWRAADLRWQMEKSGVFSRPSAREMDPNARSEIEEETMKELIKKYPGTRWAQLGAYD
                     LLDNKICGDWKAEPKCPEKESDMYEHYAHEYPQSPKAPEALYNAAWRQAVLVDMYGSK
                     DRSKAEKARKRSLEIIQELATKYTEGDWRARAIQLRYALQQNIPVYGQ"
     gene            13329..14210
                     /locus_tag="VE783_05350"
     CDS             13329..14210
                     /locus_tag="VE783_05350"
                     /inference="COORDINATES: protein motif:HMM:NF014703.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyl-diphosphate phosphatase"
                     /protein_id="HYX52856.1"
                     /translation="MNDYLLSILLGIIEGLTEFLPVSSTAHLRISEALLGIDLGNGFW
                     KMYSIVIQLGAILCLPIYFRARIAKFVSTFPNGERGDRTIANHPLTLTMIAFVFTAGP
                     AFLLTKVIGKHLESLIVMGWSLLLGGIIMWVVDGMFGHPREGTRFRTEHMEEMTMGQA
                     IWIGICQIASAVFPGTSRSMSTIAAGQLAGMSRPSALEFSFFLSIPTMVAATCYDLFR
                     TLHPKHGAAPLGSMPTNSHEWVVLLIGFVISFFVAWGVVAWFMNWVRQRGFTPFAVYR
                     IIVGAALLYWVMKGHGG"
     gene            14336..14518
                     /locus_tag="VE783_05355"
     CDS             14336..14518
                     /locus_tag="VE783_05355"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52857.1"
                     /translation="MVVTGELIRMMNYVDDIAATLRRIQAGISTMTAEEKKRLADYMR
                     KADPNYLAMVEGLEKS"
     gene            14521..15399
                     /locus_tag="VE783_05360"
     CDS             14521..15399
                     /locus_tag="VE783_05360"
                     /inference="COORDINATES: protein motif:HMM:NF014757.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0070403 - NAD+ binding [Evidence IEA];
                     GO_process: GO:0006631 - fatty acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyacyl-CoA dehydrogenase NAD-binding
                     domain-containing protein"
                     /protein_id="HYX52858.1"
                     /translation="MARIRTIAVIGAGIMGRGIAHVAALGGYRTILEDILPASLRKAE
                     SEIRGNLDKAIELGKVSKADADAAFSRLEYAGSVEEAAREADLVIEAVPEEMESKIEI
                     FTLLDKICRPATILASNTSSLSVTEIASVTYRARKILGMHFFNPVHKMKLLEVVRALE
                     TDDETIAACSEVGKCMGKEVVVIKEAPGFITSRINAMIGNEAFYMLQEGIASAGDIDK
                     ALKLGLNHPMGPFELIDLVGLDTRLHILEYLHKSLGEKFRPSPLLVQYVKAGRLGRKS
                     GKGVYEYPEVPQSAKK"
BASE COUNT         3363 a         4337 c         4589 g         3289 t
ORIGIN      
        1 caagacgagg tccggcgagt tcaaagttac atccacgccg aaccaggaca atcctatgag
       61 caatggcgaa ttcccgatca tgggcaatga cgtgtgggag cacgcctatt acctgaatta
      121 ccagaaccgc cgtccagact acctgaaagc ctggtggaat gtggtgaact gggatgaggt
      181 gaacaagcgc ctcagtcagg ctgatagctt cttcagataa ccggaactcc actgatcttc
      241 aaagccgcct ccgggcggct tttttatttg tgcatggaac ttctgattac tcgctcttgc
      301 aggtgttctg tgagaaactg cggagaaaca gggggaagga tgatgggaac cgcctttcgg
      361 gatctacgcc acagcttgcg atcgctgtac aaagcgcccg gtgttgcgct tctcgcggtg
      421 ctgatcctgg cgctgggaag cggcggcaac gtggctatct tcagcatcgt agatgtcctg
      481 ctcttccgac cgctgcccgt ttccaatccc gatcaattgg tccgcatttt taccggtaag
      541 acaaaaggcg acgcgcgggc cggctttgtc tctcttcccg actacgaaga gtaccgcgac
      601 aacgcccctg cgttctccgg aattgcggcg tgcctcgatc gatttccggc caatgtgtca
      661 gcggcaaaat tcggcagcga gcgcgtgaac gttggaatgg tcaccggcaa ctattttccg
      721 ctgcttggag tgcatgcatc tcttggacgc acgctggtcc cggacgatga gcgcaccgat
      781 gcatcgcctg ttgcactgct gagtcatagc ttctggaagc gccattacgc aagcgacgca
      841 aaagtcctgg aatcccaaat ccttgttgat ggtcagtggt tcacaattgc gggtgttgtg
      901 ccggcggatt tcggcggtgt ctcctttgaa aattttcccg aactatggat cccgctggct
      961 cagggccgca atcttgaccc gttgctgaaa acccagcttc cactgaacca tcgctcgttt
     1021 gcacccttcg tggtcattgg acggctccga accgggatct cgttagcaca ggcgcaagta
     1081 cagctggata ccatggcagc tcgactcggg gccggcaaac cgatcgcaga agaaggcaat
     1141 tttcagcgcg catggcctgt gctggtttct gccactcagg ccgcaagaaa aagcaaccag
     1201 cagacgtctt ggctgctgct agggatagtc atattggttc tcctgatcgc ctgcgcagat
     1261 gtagctgggc tgatgctggc tcgttcggaa acgcggcagc gcgagttcgc ggtcagaata
     1321 gcgcttggag cgccacgcag caggttgctg gtcctgcatt tctatgaggc gctcctgatc
     1381 tcagcggcgg gagccgtgat tggtttgctc atcgccgctg cttcgacccg catcatcgct
     1441 ctatcggctc ctgctgctat tgatctaccc ctgcaacgtt cttcctccat tctcgatgtt
     1501 cgcgtgttgg cattcacaat agctgtatct ctgctcacgg cgttgatcag cgccatggtt
     1561 ccggccctgc gctactctcg ttccgatcta gcgctcgaag ttaaaactga ctctcgccga
     1621 tccagcgcca ttgggcgatc ctggtccatt cacaccgctc tcgtgctcgc tcaaattgca
     1681 tcggccgtgg tcttgctggc cgctgcaggt ctgctggcca ggacgctgtg gcaggcttct
     1741 aaaatccaac tcggtttcag tccggcaaac accgtctttg gttcaaccga tttgatccgg
     1801 cagggataca caaaagaaca ggcagccagc ctgcttgcgc cattgttgca ggccctgcgt
     1861 gcgcaaccgg gtgtgcagtc cgcagctttg ggagcgcctc ctcttcagtt caccatgcag
     1921 accatggtaa agattgaagg cgcacagtcg ggcgacgccg aaaagcaatc aatcgccctc
     1981 gttcgtgtaa gcgacggcta tttcgacacc accggcattc cgctgccgag cggacgagac
     2041 ttcaggcctt cagatggcgc aactgccccc ggggcggcaa tcgtctcaca atcctttgcg
     2101 cacaaatggt ggccggacaa atcagccatt ggcatgcatc tctcgcatgc gggcattcac
     2161 gaccagacat tcgaaatcgt aggtgtcgtc ggcgacactg cgggggctga tccccgccag
     2221 gatgatccgg cagtcgttta cctgccgctc gagcaaagct atcttatgtt cccgtggcag
     2281 ccggatgtca cgttgattgc gcacggagcg cgcagagaag ctgatttgat cagctcactt
     2341 cgtcgcgctg tggtggagat cgatcccgcc ctgcctttgt tccgggtgcg cactcttgac
     2401 cagcaggttt ctgccattct gggcgaagaa aagtttctgg ctcggctgct catcgtgttt
     2461 acctgtgttg cggttgttct tgcggctgcc gggcttttcg gcctgatggc gtataccaca
     2521 gcccgggcga cgcatgaatt tggccttcgc atggcgctgg gagcgcaaaa gagtcatgtg
     2581 ctctggatgg tattgagaag agcgctgatt ctgtcgggcg tcggtctggc gatcgggctg
     2641 ggaggagcgc attggctttc ccggtacttg aacgggcttc ttttcaacgt aagtcggaat
     2701 gacctggcca cttttgtcgt tgtgcctgta gcgacgattc tggtcgcgtt gcttgcctca
     2761 ttcgtcccgg cactgcgcgc aaccagcgtc gatccgctgg tcgcgcttcg cgaggagtaa
     2821 ctccaaaatt tcatttccct gctgtcgcgg cgcttagatt ttccgcgaag ctgaagaact
     2881 ggtccacctt ggtctgtcgg agcgccgtgc ggatacgatc gctcacactg actagggtga
     2941 gactgcgtcc cgtcttttga ccgctcacgt aggctcctac cagcgcgccg atgcctgccg
     3001 aatcgacata gggaacattg ctaaagtcga tgatcagcgc ttttgactgg tcctcgcgga
     3061 tcattcgttg aaagtcaaag aaattgttga tcaccagcgg accgttgagg cgcaggacgc
     3121 gctgaccttc ccggggtccg tgaacatcct caatccgcag ttcggagcta tccatgcagc
     3181 gtatggtaag tgctcactgc cgggaagttg ttaacgcgac gttaaaactg ggggagtcgc
     3241 gtgttgccgg cgcgatttag ggtcaccacg gggggcggta gacttcaatc tcacacctca
     3301 ggcgtgactt agccgcccag cacacctggg gtgccgttgc ccatccgctc agctgggctg
     3361 taagattaag ggtttgcccc cgcgttccaa tctcttcata tacaggttct ctcatatggc
     3421 acagacaacg gatattgcaa tcgtaagcgg cgcgcgcacg cccatgggcc gctattgcgg
     3481 caaactgcgc gacttcaccg ccatggaact gggcgccatc gctgcccagg aagctatccg
     3541 ccgctccggc gtggaggcga aagagtttga ccacgccgtt ttcggcaacg cccagcagac
     3601 ctccggcgat tctctctatg gggcgcggca cgtggcgttg aaagcgggac tcccgattga
     3661 aactcctgct ctcaccgtga accgcatatg cggatcggga attcagtcgc tggttaacgc
     3721 ggcgcagatg atccagcttg gcgaagcgag cacagtactt gctggcggta tcgagtccat
     3781 gtcgcaggcc ccgcacgtag ttcgcggagc gcgctggggc tttggcctgg gcgaaggcaa
     3841 gatggaagat tcacttatgg tcgccctgct cgatacctac tgtggccttt atatggccaa
     3901 cactgccgag ttgtacgctg aacagcaggg cattacccgt cagatgatgg acgagttcgc
     3961 gctgcagtcg cagcagaagg caggcgcagc gcagcaggca tgccgcctcg cggaagaaat
     4021 tgctcccgtc ccactgcgca accgcaaggg cgagcccacc ggcgaaatgt ttgaaaaaga
     4081 cgatcacctg cgtccggata ccagcatgga aaatctggct aagttgaagc ccgcttttgg
     4141 caagaacggc acagtcaccg ccggcaatgc cagcggcatc gtggatggcg gggcggccgt
     4201 cgtaatgacg actctcgatc aggcgcagaa gcgtggcatt aagcccatgg gacgcatcgt
     4261 gagctggggc atcgccgcgg tagaacctaa gatcatgggc agcggtccgg tgccgtcctc
     4321 gcgtgcggca ctcaagaagg cgggactcac gctcaatgat atagacctga tcgaagtgaa
     4381 cgaagccttt gccggtcagt accttgctgt tgaaaaagag ctcggcctgg atcgcagcaa
     4441 ggtcaacgtg aacggcggcg ccattgctct cggccacccc ctcggcgcca ccggaacgcg
     4501 gctggtgatc acgctgctgt tcgagctgcg tcgccgcaaa gcgaaatacg gtttggcgac
     4561 agcctgcatt ggtggcgggc agggcattgc gatgatcgtg gaaaatttgc agagataacg
     4621 aatccaccaa aggacacaga gaaacacgaa gaaagacata accacaaagg ccacgaaggg
     4681 aatcaaatca gttccaggat ctgtccaggt acataccggg gtaagtgatt cctctgtgct
     4741 tttctgtgac ctctgtggtg aaatccttcg tgatcctttg tgccctttgt ggtgaaaagg
     4801 cggggagaat ggcgatcaaa aaagttggcg tactcggttg tggcctgatg ggatcaggca
     4861 tcgcccaggt cagcgcgacc gcgggttatg acgtggtggt attggaacag gaacagaaat
     4921 tcctggacaa aggcttcgcc ggaatcgaaa agtcgctggc caagtttgcc gaaaagcccg
     4981 ataaaaccgg agtcactccg gagttggcca agcaggcccg tgcgcgaatc gctggcacga
     5041 cgaaccggga agacctggct gattgcgaca tcattattga ggcgatcatc gagaacgtgg
     5101 aggagaagaa gaaaatgttc tccgccctcg atggcattgt gaaacaagac ggcatctttg
     5161 ccagcaacac ttcttccatc tcgattaccg aggttgccgc cgcaaccaag cggcctgacc
     5221 gcttcatcgg gttgcatttc tttaatcccg tgccgctgat gaagctggta gaggtcgtcc
     5281 gcaccattgc caccagcgac gacgtctttg agacctcctt caacttcggc aagagcctgg
     5341 gcaaagtacc agttcgcacc agtgataaga ccggctttat cgtgaatcgc ctgctggtgc
     5401 catatctgct ggatgcaatc cgttcgtacg aagaaggtgt gggctcgatt cctgatatcg
     5461 acaacgcaat gaagctcgga tgcggctatc cgatgggccc gttcacgctg ctggatttcg
     5521 tcggcctgga tactacctac tacatcaccc atgtgatgtt tgacgagttc cgcgaacgtc
     5581 gcttcgcgtc tccggctctg ctcaaacgtc tggtgatggc gggctggtac gggcgaaaga
     5641 ccggcagggg attttacgat tattcggacc cgaataatcc ggtcgcccag agattctaaa
     5701 actcatgcga tggccctgga tcgtggtaac ggcggcagtg ctggagggcg tggtcggtct
     5761 ggcattgctt ggtacggcag ccgttatggt cgttgcggca cgaactgcag cgagtcttga
     5821 ttttgcagag ggcactgcgg ccggcatctt gggggcgatt ggtctggtgg tcctcacctc
     5881 ttgcgcgggc atgttgaaga ggaagtcttg gggttggtgg ttggcggagg cggcaaacct
     5941 ggtcgggctg gtcgtcttcg tgtgggatcc cctgacgcgc cgcgtgccgg acaccgacga
     6001 agtggctttc attgttcttt tgggcgtgct gctgttggtt cttctgttag caccggtacg
     6061 cgattctttt ctgcagaaga aagaaaacgt ggctgtaacg aacgcgaaaa cgtagtttgg
     6121 cctctcgggt atctattttg gatcagcaca atctgtggct gaaaggcttt ttaaatggca
     6181 cttgaaaacg taaagttcga aaagaaaacc aaaatcgctt acgtcaccat cgaccgtcct
     6241 aaagtcctga acgcgctgaa catggcaacc atggaggaac tcgagcaggt cttcaccgaa
     6301 ctcgccgcgg acgcggacac gcgtgtggtc attctgaccg gaggtggtga gaaggccttc
     6361 gttgccgggg cggacatcaa cgaattgtcg aagaacaatc ctgttgaagc gaaggcctac
     6421 acacatcgcg gacaggccgt actggacctt atcgaaaacc tgggcaagcc tgtaatcgcc
     6481 tgcatcaatg gttttgcgct cggcggcgga tgcgaaatcg ccatggcctg caccatgcgc
     6541 cttgccagcg agaacgccaa actcggtcaa ccggaggtga agctgggcat catccccggt
     6601 tatggcggca cgcaaaggct tccgaggctt gtgggtaagg ggcttgcaat gcagatggtc
     6661 ctgaccggtg acatgatttc cgctcaggag gcgcaccgca tcggtctggt aaatgaggta
     6721 gtgcctgcgg acaaactgat tccgcgtgcg gaggaaattg ccggcaagat catcggcatg
     6781 gcgccgctcg caattcagta ctgcatggaa gccgtgaacc agggcatgaa catgagcctg
     6841 caggacggat tgttcctgga agccactctg ttcagcatct gctgtgccac cgatgacaag
     6901 aacgaaggca cacgcgcgtt tcttgaaaag cgggccgcca acttccaggg caagtgacct
     6961 tcaatgatca aaggcatcac ggcaatccag aaaatcgagc gtcgcagcga cttcgagacg
     7021 ctcgtggagc ttttctccgc actgggcttt gagccgggaa ctggctggaa gaccgcaaag
     7081 agtgaaggct cgccttttct cgcgccgatc ggcaatttgg aactggtgaa tggtgacgcg
     7141 ccgccgcata ccaatctgtg ggttgaggtt accgatcttg attcagtccg cgagttcttt
     7201 cgccataaga agatcaagcc gtcggttgag gtttatgaca cagattgggg ttcccgggcc
     7261 ttcgtagtcg agccagtgaa gaagctgaag atcgctttct ggcagccgaa ccgtccgaag
     7321 gcgaacgcga ttgaaggcga cctgagcgcg accggaatga ggttcgcttt ggtcgtcgca
     7381 cgctggaact cttttatcac cgaaagactg cttcagggcg ctctgaatgc acttcgccgt
     7441 agcggctgca aagagcagga catcaccgtg gtccgcgtgc ccggatcttt cgaaattcct
     7501 tctgaagcca gaacgctcgc ggaaaccggc tcctacgacg cgatcattac gctcggttgc
     7561 ctgatccgtg gtgagaccac ccattacgag cacattgcga cggaagtaac gcgcgggatc
     7621 ggtcagtccg ctcagcaaac cggtgttccg cacacttacg gcgtgcttac ctgtgagaac
     7681 ctggagcagg ccattgatcg cgccgggctc aaagccggca acaagggcca cgaggcggcg
     7741 atttccgcca tcgagatggt cagcctgaag cgcaagacca gaggcatggc atccaaaagc
     7801 agggccacat aaatatgggc acacgccgca aatcccggga gctctgcctg caaatgctct
     7861 ttcaatggga catgggcaag cagccgcctg atctggtgca gaaaaccttc tgggccgagc
     7921 gtggcgaggt ggacgaagag acccgcggct tcgccgacga cctttttcat gttgcggtgg
     7981 agcgccaggc cgaagtggat gatctcatcc agaagcacgc gcccaattgg aagatcgaac
     8041 gaatggcggc cgtggaccgc aatctgctcc gcaccggagt agccgaattt atcgcctacc
     8101 cgcaaacgcc caagcccgtc gtgatcaatg aggcgctgga gatcgcgcgc aggttctctg
     8161 cccctgagtc agtacaattc atcaatgccg tgctggatgc agtgggaaag gatctggcca
     8221 ccacggcagc acccggccgg ctgaaatgag tgttcgccgg gagagtgccc cgatgctgct
     8281 agaataactg cttagccgcc ccgattctgc aaaactaaaa cggaactctc gattgaagaa
     8341 aagctccatc acttacgccg atagcggtgt gaatattgac cgcgccgacc gcgccaagca
     8401 acgcatcaag tatctggctc accgcacctt caccaaggga gtggtcagcg agatcggcgg
     8461 cttcggcggc atgttctctc tcgacaagaa aaagtttcgt gaccccgttc tggtttccag
     8521 cgtggatggc gtcggcacca agctaaaagt cgcgttcatg atgggcattc accataccgt
     8581 tggcggcgac ctggtgaacc attgcgtcaa tgacatcgct gtgcagggcg ctgcacccat
     8641 gttctttatg gactatctcg ccactggcac gctggagccg gaaattgcgg agaagattgt
     8701 ggagggcatc gccgattcgt gccgccacaa cggctgtgcg ctaatcggcg gtgaaacggc
     8761 ggagatgcct ggcttctatc ccgaagggga atatgatctc gccggcttca tagtcggcgc
     8821 ggtcgaccgc tcaaagatca tcactggcga aaacgtccag gcgggcgacg tgctggtagg
     8881 gctgccttcc aacgggctcc atacgaacgg ctactcgctc gcgcgcaagc tattttttga
     8941 agtcgcaaag tacacgccgg atacgtacat caatgacatt catggcaaag ccggcgccga
     9001 actgctgaag acccataaga gttattggcc cgtgctgcgt aaactgattg atgctgaagt
     9061 ggtccatgcc atggcccaca tcaccggtgg cggcatcacg gataatctgc cgcgtgtgct
     9121 tcccaaaggc acagcagcaa ttgttgagat gggcacctgg cccattctcc ccgtattcag
     9181 ccacatgcag aaaatcggca acgttcccca ggacgacatg atgcgcacct tcaacatggg
     9241 aatcggcatg gtgctggtgg tcccggcgaa aaagttcaaa cgcgtgcaaa gcctgatcga
     9301 gaagtgcggc gaaaagtctt tcctgatcgg ccgcatcgta aaaggcgagc gtaaggtgct
     9361 ctacgcctga tatggcgcgc cttcccagac ttggaatcct gctctccggc cgcgggtcca
     9421 attttgaggc cattgctgaa tccattgcta ccggccgcct gcaggcggaa attaccattg
     9481 tgatctccaa tcgtactgat gccgccggac tggattcggc gaagcggcgc ggtctcaacg
     9541 cgcagctgat cccatccaag ggccgcgttc gcgaagagca cgatgccgaa gtaattgcgg
     9601 cgctcaaagc ggcgcaggtt gatttggtct gtttggctgg ctacatgcga ctgctctcgc
     9661 cggaattcgt gcgggcattc gctcaccgca tcctcaatat tcatccctca ctgcttccag
     9721 catttcccgg actcgattcg cagaagcagg cgctggaata cggcgcaaag attaccggct
     9781 gcacagttca ttttgtcgat gagcatctgg atcacgggcc gatagtgctg caaaaaccgg
     9841 ttccggtgct ggagggcgat gacgagcaca cgctctcggc ccgcgttcgg gagcaggagc
     9901 acatcgctta cacggaagcg atccggctcg ttctctccgg tcaagtagag attcagggcc
     9961 gccgcgtagt tcggcgcagc aaggcggagc atgctcaaag ttaaacttct caactcctcc
    10021 ggcaaggtgc ccaccgtggc gcaccctggc gaagaccttg gctatgacat atacgcggct
    10081 accatggtca taattcccca gcgcagccac gcggtggttt cgacggcgat cgccattgaa
    10141 tgcacttcgc cggacggtga gccgatgggt gcgctccttc gcgacaaatc ttccatggcc
    10201 tcgcggcgcc tggtgcttac cggtggggta atcgatgcag gctaccgcgg cgagatcaaa
    10261 gtcttaatgg aaaacctggg cgatacggac gcggtgatca aggcgggcga caagattgcc
    10321 aacctgattc cttatccggt tcttacgggc gaagtgcaag tggtgaagga actcacggag
    10381 tccagccgca aggccggcgg gtttgggtcc agcggaagat gatcgctcgc ctactgttac
    10441 actgaaatgt catggtcacc ctgcttgata ttgaggctgc acgggagctg ctgcgcggca
    10501 ttgctgttcg caccccgctc gtgcgctgca cccttcctga cggaactccg attcagatca
    10561 agccggaaaa cctgcagccc attggctcgt ttaagctgcg cggagcctac aacaaaatca
    10621 attccctcac gccggaagaa cgcctccgcg gtgttgttgc tcactccagc ggcaatcatg
    10681 ctcagggagt tgcttatgcg gctagagcgc taagtgtgaa agccacgatt gtcatgccgt
    10741 ccaacgctcc caggataaaa atgaaagcaa cgcgtgattt tggggctgaa atcgttgaag
    10801 ttggtcctgc tggcaatgat cgcatccgcc gcgccggaga actggagcgc gagcgcggcc
    10861 tggttcctgt ccctccttac aatgacgaaa agatcattgc gggtcaggga acacttggac
    10921 tggaaattct ggaagacgcg cccgaggtgg atctcgtgct ggtgccggtg ggcggtggtg
    10981 ggctgatcag cggcgtggca actgcgatca aggaatcgca tccgggagtg aaggtggttg
    11041 gggttgagcc gacttgcgcg agtgatgcac aggcaagttt ccgaagcggc cgaattcaaa
    11101 ctgtcgcggc agagcaggcc attcagactc ttgccgatgg cttgcgctcg cagagcatcg
    11161 gcccaattaa cttcgagcac atccggcaat acgttgacga catcattacc gtgagtgacg
    11221 acgagctgaa gcaggccatg cgtcatcttt tgttctctgc ccgcatcctg gccgagccaa
    11281 gcggggcggt aacgactgca gccgccatgt tccaccggca tgagcttcct ccggcaaaaa
    11341 acatagttgc cgtggtgagc ggcggtaata ttgaaccgga tttgtttttt cagatcatga
    11401 acggaaacca gccacaatga aagtgtcgcg aaggggcttg aggcttgcgc ttgcattcct
    11461 gtgttgtgcg ctctctgccg cagccgccga ccgcgagcac gccacaccca ttcgcgaaat
    11521 gggagtggct cagcagcccg gcggaagcca gagtgtggcc cagattgagc gcggccgcga
    11581 tctggtgatt ctggctcgca gcagcgccgg aaacgacatg tggcttcaag tcaccgcgct
    11641 ggcacagccg ggaactccgc agcaggaaac cactggatgg gtgccggcca agctggccat
    11701 ctctgcctcg gtaccgaatg cggaagaaat catctacgga gcagcggtgg attctgaaat
    11761 tgaagctgag aagccaaaag gtcgccgcag cgctgctgac gacgcattac ggttgtacca
    11821 gcgcaccgca caattctttc ccgactctga ctccggccat gaggccttgt ggcgttcagc
    11881 ggacattcag tggcagcttg atcgcgcgcg caaacggaag ccgattgctg aaacggccat
    11941 gcagaacgtg attcaaaggc tgcccggctc gcgctatgcc gacctggccg catatgcgct
    12001 gctggagaat cagctctgtg gcgactggaa gggccaagcc gcctgccctg cacaagaagc
    12061 agagatttac gaacgttacg cgcgggagca tccgcactca cccagggccg cagaggcgct
    12121 ctacaatgct gcctggagga tcggggtggt ggccgacatt taccgcgtgc gcaacaacaa
    12181 ggaacagagc accgcctctc gcgatcgcgc gttggcactt gcgcgggaac tttcaaatca
    12241 attcccgcag gcggagtgga agtaccgggc cgaaacgctg gtctataaac ttgagaagaa
    12301 cattcctctg tatggaacgt cggagtaacg gcatggccgg cctgcgaaaa cttgcgatta
    12361 ctgtgtcttg tgtgctctcg ctattcattg ccggcgctgc tcatgcagcc gacaaagagc
    12421 acggcaccgt gatcggtgat gccgatatat atgtttcccc cgatacaacg gcccagcgca
    12481 tcgggcatgc cagtcgcggc cgggacatct ttctgatggg acgttcaaaa atcgacaaca
    12541 aagactgggc gcacgtgctt gccactatcc aggaagggct gctgcagccg cgcgagatca
    12601 gcggatgggt ggatggccgg ctggttgtaa ccgtttctac acccaatggc gaccagatta
    12661 tttacggcga ggccgttgat tccgaacacc agcaagaact ccgcggcggc cgtcccaaag
    12721 cggatcagga cgccatgcgg ctttactacc gcctgtatga atacttcccc gcgtctccac
    12781 tcgcagggga agcgctatgg cgcgctgcag acctgcgctg gcaaatggaa aagtccggag
    12841 tcttttctcg cccttcagcg cgtgaaatgg accccaatgc ccgttcagag atcgaagaag
    12901 aaacaatgaa ggaactgatc aagaagtacc cgggcacccg ttgggcgcaa ttgggtgctt
    12961 acgatctgct cgataataaa atttgtggtg actggaaggc cgaacccaaa tgtcctgaga
    13021 aggaatcgga catgtacgaa cactatgcgc acgagtatcc gcaatcaccc aaagctccgg
    13081 aggcgctcta taacgccgcc tggcgtcagg ctgtgctggt ggacatgtac ggctccaaag
    13141 atcgcagcaa ggctgaaaaa gcgcgtaaaa ggtcgctgga gatcatccag gaacttgcca
    13201 ccaaatatac ggaaggcgac tggcgcgctc gtgctatcca gttgcgttac gcgttacagc
    13261 aaaacatccc tgtttacgga caataacgat cgcgcgcagc ttcaagcagc tgcatgcgtg
    13321 gaggagtgtt gaacgactac ctgctttcca ttctgctcgg cataatcgag gggctgactg
    13381 aatttctgcc ggtaagttcc acggcgcacc tgcgcatcag tgaagcgctg ctgggcatcg
    13441 atctcggcaa tggcttctgg aaaatgtatt ccatcgtcat ccaactcggc gcgatcctgt
    13501 gcctgccgat ctacttccgt gcgcgaatcg cgaaattcgt cagtacgttt cccaacggcg
    13561 aacgcggtga ccgcaccatt gcaaaccatc ctctcacgct cacgatgatt gccttcgtct
    13621 ttaccgcagg gccggcgttc ttgctgacca aagtaatcgg caagcacctg gagagcctga
    13681 tcgtcatggg gtggtcactg ctgctcggcg gaatcattat gtgggtagtc gacggaatgt
    13741 ttggccatcc ccgggaaggg acacgcttcc gtaccgagca catggaagag atgacaatgg
    13801 ggcaggcaat atggatcggc atctgccaga ttgcgtcagc cgtgtttccc ggcacatcgc
    13861 gttctatgtc gaccatcgct gccgggcagc tcgccggcat gtcgcgaccg tcagccctgg
    13921 aattttcttt cttcctctcg attccgacta tggtcgccgc cacctgctac gacctttttc
    13981 gcacactgca cccaaaacat ggagcagcac cgctgggcag catgccaacc aacagccacg
    14041 aatgggtggt gctgctgatc gggtttgtta tctcattctt cgtcgcctgg ggcgtggtcg
    14101 cgtggttcat gaactgggtg cgccagcggg gtttcactcc ctttgccgtg tacagaatca
    14161 ttgtgggagc ggcattgctc tactgggtca tgaaaggaca tggcggctaa gcccgccggt
    14221 gttctggcgg gatcaggcgt ccaggaagga gctcacactg gcagcgtgac acagctttac
    14281 taaattctta tgaccattga aaatggaagg tttgctacaa ggagcgcgag agcacatggt
    14341 agtgactggt gaactgatcc ggatgatgaa ttatgtagac gatatcgcgg ccactctgcg
    14401 ccgcattcag gcgggaatct ccaccatgac cgccgaagaa aagaagcggc tggccgacta
    14461 catgcgcaag gccgatccca actacttggc catggtggaa ggcctggaga agagctagga
    14521 atggctcgaa tccgcaccat tgcggtaatc ggcgccggca tcatggggcg aggcattgcc
    14581 catgtggcgg cgctcggcgg ctaccgcacg atcctggaag atattctgcc ggccagcctg
    14641 cgtaaggccg agagtgaaat ccgcgggaat ctggacaagg caatagaact gggcaaggtg
    14701 tccaaggcgg acgcggatgc ggctttctcc cgcctggaat acgcgggtag tgtggaagag
    14761 gctgcgcgtg aagccgacct tgtgatcgaa gctgttccgg aagagatgga atcgaagatc
    14821 gagatcttca cgctgctgga caagatctgc cgtccggcaa cgattctcgc ttcaaacact
    14881 tcttcgctga gcgtcaccga aatagcatcc gtcacttacc gcgcccgcaa gattctgggc
    14941 atgcacttct tcaatcccgt gcacaagatg aaactgctgg aagtggtgcg tgctctcgag
    15001 accgatgatg agaccatagc cgcgtgctca gaagtcggaa agtgtatggg caaggaagtg
    15061 gtggtgatca aagaagcgcc aggattcatt accagcagaa tcaatgccat gatcggcaat
    15121 gaagcgttct atatgctgca ggaaggaatc gccagcgccg gcgacatcga taaggcgctg
    15181 aagctgggtc tcaatcaccc gatggggcca tttgaactga tcgatttggt ggggcttgat
    15241 acgcggctgc acattcttga atacctgcac aaatcgttgg gagaaaagtt tcgcccatct
    15301 ccgctgctcg tgcagtacgt gaaagcaggc cgcctgggac gcaagtcggg aaaaggcgtc
    15361 tacgaatacc ccgaggtccc ccagtctgcc aagaaataga aggtccaaaa gcgcgttctg
    15421 cctgtgctga aacctcgcgg tccccaacgt caccttgggg accttttgat cgaggtcttc
    15481 tttggctgtg ttacaagggg gagggtcttg ccaaacttag ttagctgaag gagtttcgtc
    15541 cttcagtgcg tccttgaaat ttttgatccc gctgccca
//
LOCUS       DASQYP010000169         9343 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_48471, whole genome shotgun sequence.
ACCESSION   DASQYP010000169 DASQYP010000000
VERSION     DASQYP010000169.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 9343)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9343)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9343
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_48471"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..291)
                     /locus_tag="VE783_05365"
     CDS             complement(<1..291)
                     /locus_tag="VE783_05365"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0005507 - copper ion binding [Evidence
                     IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="plastocyanin/azurin family copper-binding
                     protein"
                     /protein_id="HYX52859.1"
                     /translation="MAALFANVAAQPSSTDSSANELQQASPGQAQVVMKGIAFQPAQL
                     TVRPGEVVEWKNQDIVAHTVTADDGSFDSGLIQPGETWKITAPQAASISYHCR"
     gene            complement(403..996)
                     /locus_tag="VE783_05370"
     CDS             complement(403..996)
                     /locus_tag="VE783_05370"
                     /inference="COORDINATES: protein motif:HMM:NF025013.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4142 domain-containing protein"
                     /protein_id="HYX52860.1"
                     /translation="MIARKYLAAILVATLVALGSAAFAQGSKKGSTKKGGDEGKPTDP
                     QIVGVVSAADQIDIDTAKVALKKTKNDQVKQFAQQMIDDHTKLQKSVDDLAKKLGVKA
                     EPSATSKSLRTAAAAELKKLRGLTGSAFDKEYIDHEVAYHQQVIDAAGNVLIPNAQNA
                     ELKSALQGAAPLLQGHLDHAKQIQSSLGSSSDSGHQH"
     gene            complement(1223..1792)
                     /locus_tag="VE783_05375"
     CDS             complement(1223..1792)
                     /locus_tag="VE783_05375"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52861.1"
                     /translation="MSKKGIHIMRRSNSKNQVLRPALCVAAILVFLVSAAPASAQDSV
                     GGHIGVVLPLVTHAGGDTTTIGDNFSIGFPMGMTIKGKGRMAFDMEFVPSVQDTPRQV
                     GLLVHPGILYGVGHGFTVGTRAAFDVNSTQFGFTPLLNKSWPIRAENSFFKAYFAEAV
                     LPVRFNRPTGPNAVNTNPVTFGVHFGLGF"
     gene            2288..5407
                     /locus_tag="VE783_05380"
     CDS             2288..5407
                     /locus_tag="VE783_05380"
                     /inference="COORDINATES: protein motif:HMM:NF024583.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HYX52862.1"
                     /translation="MSKVSSVQPVSNANALFSGGGQMGALMRAHDWNRTPLGPPESWP
                     HSLRTAVRIILLSQYPMFVWWGKELINLYNDRYVPILGKKHPASLGQSAWESWKEIWS
                     AIGPRVDAVMKRGEATFDESLLLMMDRYGYVEETYFTFSYSPLPDDDGEIGGLFCAVT
                     EETGRVIGERRMALLRKIASATADARTVEAVCDRAAECLQEANLDLPFALVYLRDSDG
                     KLRLACESGISENHPAAPAMLEPSADEPWPVTGVLSSLAPVTVDDLSARFAALPAGGW
                     NTPPEQAMLVPLAQQGQTDPAGVLVVGTNPHRKMDDEFSGFVGLIANQIAAGLANANA
                     YSAERRRAEALAELDRAKTTFFSNVSHEFRTPLTLMLGPTEDALRSRHALTGEELERV
                     HRNQLRLLKLVNALLDFSRLETGRIKAHYQPTDLALFTAELASVFRSAMKRAGLSFKV
                     KTPPLPDTVYVDREMWEKIVLNLLSNALKSTFEGGVTVEMRSVGDHVELSVKDTGTGI
                     APEEIPNLFKRFFRIEHARRRTHEGSGIGLALVDELVRMHGGKITVSSQLDKGSTFTV
                     SIPFGKSHLPAEAVVTHEAAASAAGAARSAFIQEAMSWLPEREHSASGTALVGGEHPP
                     VAEQLDSPGGRVLLVDDNRDMREYVQKLLSGRFDVISAENGRAALEKALHDPPDIVVS
                     DVMMPVMDGYELLAALRNAPATATVPVILLSARAGEESQVEGMEAGADDYLIKPFAAR
                     ELIARVQAHLKIARFRKQAMQHELQLEKELQEAHRLATEAVENISDSFMAIDSDWHFA
                     YLNPQARSLLRDAGAQGELLGKNLWETFPALPGTEFAEQYRRCMQERVPVQCESRFGE
                     RWYSARAYPSPTGIVIYAVDTTLRKTVEAELRLKQEHLLLTQKAVRIGTWELDVESEV
                     LIISPEFAEIAGLSPQLSKLKYSDFLRSLFLSGDRKRSEEALQQALRRKKEFSIELRL
                     KRPDGEVRLVSNRGKVFYNQGRPIVLGVLVDITSPESAVAEEMPALGKASAARRPKSK
                     KKAKLKKTA"
     gene            5521..6162
                     /locus_tag="VE783_05385"
     CDS             5521..6162
                     /locus_tag="VE783_05385"
                     /inference="COORDINATES: protein motif:HMM:NF024587.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016301 - kinase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytidylate kinase-like family protein"
                     /protein_id="HYX52863.1"
                     /translation="MIRIITIEREYGSGAPEIARSVARELGWKLWDQKLTTEIARLAN
                     CHVSAVEEREERPDSLYHRLLKSFARGSYEASMTVDPPQLEMLQSLDADAIVRISKKV
                     VEQAAAEGNCVMVGRGSQHFLQDRQDTMRFFLYAPREDKIRRLVREGAQQREATSLID
                     SVDRERAAFIKTYFHVEWPNRPVYHAMFNTASGQDAVVRAILGFVRAVPAKAA"
     gene            complement(6159..7178)
                     /locus_tag="VE783_05390"
     CDS             complement(6159..7178)
                     /locus_tag="VE783_05390"
                     /EC_number="1.1.1.94"
                     /inference="COORDINATES: protein motif:HMM:NF000940.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009331 - glycerol-3-phosphate
                     dehydrogenase complex [Evidence IEA];
                     GO_function: GO:0047952 - glycerol-3-phosphate
                     dehydrogenase [NAD(P)+] activity [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_process: GO:0046167 - glycerol-3-phosphate biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent glycerol-3-phosphate
                     dehydrogenase"
                     /protein_id="HYX52864.1"
                     /translation="MSRIAVIGGGAWGTALAAVAARRGDHQVRLWALEKEVCESIAHK
                     HINSMFLPDCKLPESLAVTNDFREALEGAEIVVSVMPSHHCRRSFEHMAQWLRPEMLF
                     VSATKGIENDTLLRMSEVIREVVDRYCHFTPRIAVLSGPSFAREVAEGKPTAVTVAAP
                     DIALAARVQKDFTDPRFRIYVNDDVIGVELGGSLKNVIAIAAGICAGMQTGHNSVAAL
                     ITRGLVEITRLAVACGAEPQTMAGLAGMGDLVLTCTGGLSRNRSVGAALGEGKKLSEI
                     IAGMHGMVAEGVLTTNAAMGLAKKHAVEMPITEQMHAILHEDKSPHDVVRELMTRPGK
                     AEERF"
     gene            complement(7175..7837)
                     /gene="plsY"
                     /locus_tag="VE783_05395"
     CDS             complement(7175..7837)
                     /gene="plsY"
                     /locus_tag="VE783_05395"
                     /EC_number="2.3.1.15"
                     /inference="COORDINATES: protein motif:HMM:TIGR00023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0008374 - O-acyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006654 - phosphatidic acid biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol-3-phosphate 1-O-acyltransferase PlsY"
                     /protein_id="HYX52865.1"
                     /translation="MLNLYIIVAAAGYLLGSIPFGFLLVKFIKGEDVRRIGSGNIGAT
                     NVARSGAKGLGIATLALDTLKGALAVLFAGWLANHNGLCSGDAICTPMLRLESIAALA
                     AVLGHMFPVWLKFRGGKGVATALGVFLVLFLKAVLVSLAIFIVCVAVTRYVSLGSILG
                     SFAFPVAAWAFGVRDWRSLLPATAISLLVVVKHHQNIQRLLAGNENKLGGSRPAATEK
                     QA"
     gene            complement(7856..8401)
                     /gene="thpR"
                     /locus_tag="VE783_05400"
     CDS             complement(7856..8401)
                     /gene="thpR"
                     /locus_tag="VE783_05400"
                     /inference="COORDINATES: protein motif:HMM:TIGR02258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008664 - 2'-5'-RNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA 2',3'-cyclic phosphodiesterase"
                     /protein_id="HYX52866.1"
                     /translation="MRLFVALDIPGPIRSKLSGYMDRVRGYSPESKWARVEGLHVTLK
                     FIGEVKDEKLEAIKAALADAKAPPFQVAFEGIGFFPNTRAPRVFWAGVNADDSLSRLA
                     NSVDDALVKIGYEPEDKAYHPHLTLARARERELRALTPLLESEDQPHFGTMTAREFFL
                     YQSHTGRGGSRYDKLETFRLA"
     gene            complement(8401..>9343)
                     /locus_tag="VE783_05405"
     CDS             complement(8401..>9343)
                     /locus_tag="VE783_05405"
                     /inference="COORDINATES: protein motif:HMM:NF014517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="nicotinamide-nucleotide amidohydrolase family
                     protein"
                     /protein_id="HYX52867.1"
                     /translation="FAARGWHMAENNLQQADVIEGAEVLPNKRGSAPGQFLKVDRNGS
                     LKIIILLPGPPHELMGMFEDQCLERLQRLAPELNIATRVLKIAMIGESAADKRAAAIY
                     KLHKDVETTILAGTPGEVQLHLRARAVSRELAEKRVNLLAAELEDEFEDAVFSAQGES
                     LEQIVGYYLQMRGATLATAESCTGGLLAERITSIPGSSRYFLGGAVVYDNSLKTALAS
                     VPPLLISEHGAVSEPVAVALAQGIRDRCKASIGVGITGVAGPGGGTEQKPVGLVFVAV
                     ADENKTDVTERKYPGDRDRIRHWASQQALDMVRRRLM"
BASE COUNT         1894 a         2762 c         2801 g         1886 t
ORIGIN      
        1 acgacagtga taagagatcg atgcagcctg tggcgcagtg atcttccatg tttcgccggg
       61 ctggatcagg ccggaatcaa agctgccatc gtctgcggtg accgtgtgag cgacaatatc
      121 ctggttcttc cattcaacca cctcgccagg ccggacggtg agctgtgcag gctgaaaggc
      181 gattcccttc atcacaacct gagcttgtcc tggagaggcc tgctggagct cattggctga
      241 ggaatcagtg gaagatggct gcgccgccac attggcgaac agcgcagcca tgtttgcatc
      301 acgcagtatt ggacgagcga cggagacgtt cgcggctaac cagaggagca ataccgccag
      361 cctccatcgc atgcgcccaa actcaaccgg acacttcatc gatcagtgct ggtgtcctga
      421 atcgctggaa ctgcccagag acgactgaat ctgcttggca tggtccagat gcccctgcag
      481 gagcggtgcc gcgccctgca gcgccgactt cagttctgca ttctgggcgt tcggaatcag
      541 cacgtttccg gcagcgtcaa tcacctgctg gtggtaggcg acttcgtgat cgatgtactc
      601 cttgtcaaaa gcactgccag tgagtccgcg aagcttcttc agttctgcag ccgcggcggt
      661 gcgcaatgac ttactggttg cgctcggctc ggcttttaca cccagcttct ttgccagatc
      721 gtcaactgac ttctgcagct tggtgtggtc atcaatcatc tgctgggcaa actgtttgac
      781 ctggtcgttc ttggttttct tcaaagcaac tttggcggta tcgatatcga tctgatcggc
      841 cgcacttact acgccgacga tctgcggatc agtgggtttc ccctcatctc cgcccttttt
      901 ggtgctgcct tttttcgatc cctgcgcgaa cgcagccgat ccaagtgcga ctaacgttgc
      961 caccaggatg gctgccagat atttccttgc aatcattgct ctatctctcc ttttgaggat
     1021 tccgttcgtt gatctcgtcc ggacgttctt tgaatgaaga atgcttttca gcagcccggg
     1081 ttcaggaaca cgagccggca ggttaggtgt gtccctgcca tagagagtgt tgacggagag
     1141 tttggttacc gaagcgcgaa aatagagatt gcgggaagta aagggggcca cccgcgagcc
     1201 gggtagcacc ccgtggagaa ccttagaagc ccagtccgaa atggacgcca aacgtcaccg
     1261 gattggtatt tactgcgttc ggcccggtgg gccggttgaa gcggaccggc aacacggctt
     1321 cagcaaaata agccttgaag aagctgtttt ccgcgcgaat cggccagctt ttgttcagca
     1381 gcggcgtgaa gccgaactga gtggagttca cgtcaaaggc ggcgcgcgta cctaccgtga
     1441 agccgtgacc cacaccataa aggattccgg gatgcaccag cagtcccacc tggcgcggcg
     1501 tgtcctgcac ggagggcacg aactccatgt caaaggccat ccggcctttg cctttgatcg
     1561 tcattcccat gggaaagccg atggaaaagt tgtcgccgat ggtggttgtg tcaccgcccg
     1621 cgtgcgtgac cagcggaagc acgacgccga tgtggccgcc cacgctgtcc tgagcggaag
     1681 ccggtgctgc cgaaactaaa aacacgagaa tcgcggccac gcagagcgca ggccgaagaa
     1741 cttggttctt gctgttggaa cgcctcatta tgtgaatgcc tttcttgctc attagttcct
     1801 gctgcgcata taccggtcac aagagagcgt cgcctcttca gcgggcgggc gatccatcag
     1861 ccggggcttc cagggccggc tttaatcaaa cttgttggga ttttctggcg ggtggaggga
     1921 aaacgaccgg cgcacaggcg ccgcatgtag ccgttttcag ccagtaccgg aagtcagtgt
     1981 ggagaggtta cttctgactc aacgtattca gcaacttacg aaggtaatgt tctactgcca
     2041 cagtaagatg cgattgcggg tgccctcagc cggagctgat cgaccacccg tcaacgttaa
     2101 acttgagcgc ggatttttgt cgtgattgct gcacgaccaa gctgccgttt tgcatctaag
     2161 ttccccggga cccaaacttg ttgagaaagg gctaaggaca tccaaccgtc ccccaagcgg
     2221 gcagatgttc tcttctggat ttacaatcgt ccagcggtac gtcctgggat cgtactcaag
     2281 tcgtcagatg tctaaagttt cgtccgttca gcctgtctcc aacgccaatg cgctgttctc
     2341 cggcggcggt caaatgggtg cgctcatgcg agcccacgac tggaaccgta ccccgctggg
     2401 tccgcctgaa agctggccgc acagcctgcg taccgcggtc cgcatcatcc tgctttctca
     2461 atacccaatg ttcgtgtggt ggggcaagga gctgatcaac ctttataacg accgttatgt
     2521 cccgatattg ggtaaaaagc atccagccag cctgggacaa tcggcatggg agagttggaa
     2581 ggagatctgg agcgcgattg gaccgcgcgt ggacgcggtg atgaaacgag gcgaagccac
     2641 cttcgacgaa tcgctgttgc tcatgatgga ccgctacggc tatgtggaag agacgtactt
     2701 caccttctcc tacagcccgc tgcctgatga tgatggtgag attggcgggc ttttctgtgc
     2761 agttacagag gaaaccgggc gggtcatcgg cgaacgccga atggcgttgc tgagaaaaat
     2821 cgccagtgcc acagccgatg ccaggacggt ggaggcggtc tgtgatcggg cagcagaatg
     2881 ccttcaggaa gcgaatctgg acttgccgtt tgcgctggta tacctgcgcg actcggatgg
     2941 caagctgaga ctcgcctgcg aatccggcat ttctgaaaac catcctgccg cgcccgccat
     3001 gcttgaaccc tctgctgatg agccctggcc ggtgactggc gtgctgagtt ccctcgctcc
     3061 ggttaccgtg gacgatcttt ccgcccgatt tgcggcgctg cctgccgggg gctggaacac
     3121 gccgccagag caggccatgc tggttccgct cgcacagcag ggacaaaccg atcccgccgg
     3181 tgtgctggtg gtgggcacca atccgcaccg aaagatggat gatgagtttt ccggcttcgt
     3241 gggactcatt gccaaccaga tcgccgccgg gctagcgaat gcaaacgcct acagtgccga
     3301 acgcaggcgc gcggaagccc tggccgagct ggaccgcgcc aagaccacct tcttcagcaa
     3361 tgtgagccac gagttccgga caccgctcac tctcatgctt ggccccaccg aagatgcttt
     3421 gcgatcgcgg cacgccctca ccggcgagga actggagcgg gtacatcgca accagttgcg
     3481 tctgctaaaa ctcgtcaacg cgttgctcga tttctcccgg cttgaaaccg ggcgcatcaa
     3541 ggcgcactac cagcccacag atctagccct cttcacggct gagctcgcga gtgtcttccg
     3601 ttccgcgatg aagcgcgcgg gattgtcatt caaggtgaaa acgccgcccc tgccagacac
     3661 ggtttatgta gaccgggaga tgtgggaaaa gatcgtgctc aatctgctct ccaacgccct
     3721 caaatccacc tttgagggtg gggtcacagt ggagatgcgc agcgttggcg atcatgtgga
     3781 gctctcggtg aaagataccg ggaccggcat tgctccggaa gaaatcccga atctgttcaa
     3841 gcggtttttc cgcatcgagc atgcgcgccg caggacccac gaaggcagcg gcatcggcct
     3901 ggcgctggtg gacgagctgg tgcgcatgca cggcggcaaa atcacggtca gcagccagct
     3961 cgataagggc agcaccttta ccgtgtccat tccatttgga aagtcgcatc tgcccgcgga
     4021 agccgtggtg acgcacgagg ctgccgcatc tgctgccggc gccgcgcgca gcgcgttcat
     4081 ccaggaagcc atgagctggt tgccggagcg cgaacattcg gcgtcgggca ccgccttggt
     4141 tggtggcgaa cacccgccgg tcgcggagca actcgattcg cccggtggac gggtcctgct
     4201 ggtggatgac aatcgcgaca tgcgcgagta cgtgcagaag ctcctgagcg ggcgttttga
     4261 cgttatcagc gcggagaatg gacgcgcagc tctggagaag gcactgcacg atccgccgga
     4321 cattgtggtg agcgatgtga tgatgccggt gatggacggc tatgagcttc tggcggcatt
     4381 gcggaatgcc cctgccaccg ccacagtccc ggtgatcctg ctctccgcac gcgccggcga
     4441 agagtcgcag gtggaaggca tggaagccgg ggccgacgat tacctgatca aacccttcgc
     4501 tgcccgcgag ctcatcgcgc gcgtgcaggc ccatctcaag atcgcccgtt tccgtaagca
     4561 ggcaatgcag cacgagctgc aacttgaaaa ggaacttcag gaagcccatc ggctggccac
     4621 ggaagcggtg gagaacatca gcgacagctt catggccatt gattctgact ggcattttgc
     4681 atacctgaat ccgcaggcaa gatcgctgct gcgcgatgcg ggagcacaag gtgagctgct
     4741 gggaaagaac ctgtgggaaa cgtttccggc attgcctgga actgagtttg ccgaacagta
     4801 ccgccgctgc atgcaggagc gcgtgccagt gcaatgtgag tctcgcttcg gagagcgctg
     4861 gtattcggcc cgggcttatc cttcaccgac gggaatcgtg atttatgcag tagacactac
     4921 cttgcggaaa acggtggaag ccgagctgcg cctgaagcag gaacaccttc ttctgacgca
     4981 gaaggcggtc aggattggga cgtgggagct ggacgtggaa agtgaagtcc ttatcatttc
     5041 gcctgagttt gccgagatcg ccggtctttc cccgcagctc tcgaagctga aatattctga
     5101 tttcctgcgg tctctgtttc tctccggcga tcgcaaacga agcgaggaag cccttcagca
     5161 agccctgcgc aggaaaaagg aattcagcat tgaactccgg ctgaagcgtc ctgacggcga
     5221 ggtgcgcctg gtttccaatc gcggcaaagt tttttacaac cagggcaggc cgattgtgct
     5281 gggcgtgctg gtggatatca cctcaccgga atctgccgtt gccgaggaaa tgcctgcact
     5341 gggaaaggcg tcagcggcgc gccggccaaa atcgaagaag aaagcaaagc tgaaaaagac
     5401 tgcctgaagg cggcgtggga agacacaata gtcatcattg gcggtacggc acggatctct
     5461 gattttgctt gtcggccgct attttcgcat ctaagctgtc cagcgcaggg agaatgcctg
     5521 atgatccgca tcatcaccat tgaacgtgag tacggcagcg gcgcgccgga gattgcgcgc
     5581 agtgttgccc gggagcttgg ctggaagttg tgggaccaga agctgacgac agagatcgca
     5641 cgcctggcca actgccacgt ttctgcggtt gaggagcgcg aggagcggcc cgactcgctg
     5701 taccatcgcc tgctcaagtc atttgcgcgc ggcagctatg aggccagtat gacggttgat
     5761 ccgccgcagc tggagatgct gcagtccctg gatgctgacg cgattgtgcg gatctcaaag
     5821 aaggtggtgg agcaggcggc agcggaaggg aactgcgtca tggtgggccg cgggtcacag
     5881 cactttcttc aggaccgcca ggacaccatg cgcttcttcc tgtatgcccc gcgggaagac
     5941 aagatccgcc gtctggtgcg ggaaggcgcg caacagaggg aagccacatc cctgattgac
     6001 agcgtcgacc gggaacgcgc ggcgttcatc aagacgtact tccacgtcga gtggccgaac
     6061 cgccccgtgt atcacgccat gttcaacaca gcgtccggcc aggatgcggt ggtgcgcgcg
     6121 atcctgggat ttgtgcgagc ggttcctgcg aaggcggctt aaaaccgttc ttcagctttt
     6181 cctggccgcg tcatcagctc acgaaccaca tcgtgcggtg acttgtcttc atgcaggatg
     6241 gcgtgcatct gctcggtgat gggcatctcc accgcgtgct ttttcgccaa gcccatggct
     6301 gcattggtgg tgagtacgcc ctcagccacc atgccatgca ttcccgcgat gatctcgctc
     6361 agctttttgc cctcacccag cgctgcgccc acgctgcgat tgcgtgacag gcctccggtg
     6421 caggtcagga caaggtcccc catgcctgcg agtcccgcca tggtctgagg ttcagccccg
     6481 caggcgacgg ccagccgggt gatctctacc agaccgcgtg tgatgagggc agccacggag
     6541 ttatggccgg tttgcatgcc cgcgcagatg ccggcggcga tggcgatcac attcttcagc
     6601 gatccgccca actctacgcc gattacatcg tcatttacgt aaatgcgaaa acgaggatcg
     6661 gtgaagtcct tttgcacccg cgcagcgagc gctatatctg gggctgcgac agtgacggca
     6721 gtcggcttac cctccgctac ttcgcgagca aacgatggac cgctgagcac cgcgatcctg
     6781 ggcgtgaagt ggcaatagcg gtctaccact tcccggatca cctcactcat gcgcagcagc
     6841 gtgtcattct caatgccctt ggtcgcgctg acaaaaagca tctccgggcg cagccactgc
     6901 gccatgtgct caaagctgcg gcggcaatga tgtgacggca tgacactgac cacgatctcg
     6961 gcgccttcca gcgcttcacg gaaatcattg gtgaccgcca gcgattccgg cagcttgcag
     7021 tcgggcagaa acatggagtt gatgtgtttg tgagcgatgg attcgcagac ttctttttcg
     7081 agcgcccaca ggcgtacttg gtgatcgcca cgacgggctg caaccgccgc cagcgccgtt
     7141 ccccaggcgc cgccgccgat caccgcaatc cggctcatgc ctgtttctcc gtggctgccg
     7201 gcctggagcc gcccagcttg ttttcattgc cggcgagcaa acgttggatg ttctggtgat
     7261 gttttacgac gacgagcaga gagatggcgg tggcaggaag caacgatcgc cagtcacgca
     7321 cgccgaacgc ccatgctgcc acgggaaacg cgaagctgcc gagaatcgag ccgagagaaa
     7381 cgtagcgggt cacggctacg caaacgataa aaatggccag agacaccaga actgccttga
     7441 gaaagagcac caggaatacg cccagcgcgg tggccacgcc cttgccgccc ctgaacttca
     7501 accataccgg gaacatgtgg ccaagcaccg cggccagagc ggcgatggat tccagtcgga
     7561 gcatcggagt gcagattgcg tctccggaac acagaccgtt gtggtttgcc agccatccgg
     7621 caaaaaggac cgccagagcc cccttgagcg tgtcgagtgc cagcgtggcg atgcccagac
     7681 ctttcgcgcc ggagcgggca acattggttg cgccgatgtt gccgctgccg atccggcgca
     7741 cgtcttcgcc cttgatgaac ttgaccagca aaaaaccgaa ggggattgat ccgagcagat
     7801 aacccgcagc cgcgacgatg atatagagat tcagcatgaa gtcgtgaagc agagattatg
     7861 ccagccggaa tgtttccaac ttgtcatacc gggagccacc acgtccggtg tggctctggt
     7921 agagaaaaaa ctcgcgcgcc gtcattgtac cgaagtgcgg ctggtcttcc gattcaagca
     7981 gcggagtgag agcccgcagt tcccgctcgc gtgcccgggc caacgtgaga tgcggatgat
     8041 aggctttgtc ttccggttca tagccgatct tcaccagagc gtcatccacg ctattggcca
     8101 ggcgtgaaag agagtcatcg gcgttcactc ccgcccagaa aacccgcggc gccctggtat
     8161 tcgggaaaaa tccgatgcct tcgaaggcga cctgaaacgg cggagccttc gcatccgcga
     8221 gcgccgcctt gatcgcctcc agcttttcgt cttttacttc gccaatgaac ttgagcgtca
     8281 catgaagtcc ttccacgcgc gcccatttcg attccggaga ataaccgcga acacggtcca
     8341 tgtagccgga gagtttgctg cggatggggc ccggaatatc gagcgcgacg aagaggcgca
     8401 ttacatcagc ctccggcgga ccatgtcgag cgcctgttgc gaagcccagt gccgtatgcg
     8461 atcgcgatcg ccgggatatt tgcgctcagt gacgtcagtc ttgttctcgt ccgccacggc
     8521 gacaaagacc agcccgacgg gcttctgctc cgttccaccg cccggccccg cgacgcccgt
     8581 aatgccgacg ccgatagatg ccttgcatcg gtcgcggata ccctgcgcga gcgccacggc
     8641 aacaggctca ctgacggcac catgttccga gatcagcagc ggaggcacgc tggcaagtgc
     8701 cgtcttcaaa gagttgtcat acaccactgc gccgccgaga aaatatcgtg agctgcccgg
     8761 gatggaggtg atgcgctccg ccagcagccc tccggtgcag gactccgcgg tggccagggt
     8821 cgccccgcgc atctgcaagt agtaaccaac gatctgctcc agactctcac cctgcgcgga
     8881 gaagaccgcg tcttcaaact cgtcttccag ttccgcggcc agcaggttga cccgcttctc
     8941 cgccaactct ctgctcacgg cgcgggcgcg aagatgaagc tgcacctcgc cgggcgttcc
     9001 ggcgaggatg gtggtctcaa catccttgtg cagcttgtag attgcggccg cacgcttgtc
     9061 tgccgcagac tcgccaatca tggcgatctt cagcacgcgc gtggcaatgt tcagctccgg
     9121 cgccagccgt tgcaggcgct ccagacactg gtcttcaaac atccccatca gctcatgcgg
     9181 cggaccgggc aggaggatga tgatcttgag gctcccgttg cgatccactt tcaggaactg
     9241 tccgggggcg ctgccgcgct tgttgggcag cacctccgcg ccttcaatca cgtcagcctg
     9301 ttgcagattg ttttccgcca tgtgccagcc gcgcgcggca aag
//
LOCUS       DASQYP010000170         9434 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_112355, whole genome shotgun sequence.
ACCESSION   DASQYP010000170 DASQYP010000000
VERSION     DASQYP010000170.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 9434)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9434)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9434
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_112355"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..181)
                     /locus_tag="VE783_05410"
     CDS             complement(<1..181)
                     /locus_tag="VE783_05410"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52868.1"
                     /translation="MLKKVLAVLAFTSCFAVGVVAQEQGKPEPQKQEPEVKIDWQLGP
                     TTGKLGDIAEIKIPEG"
     gene            259..1314
                     /locus_tag="VE783_05415"
     CDS             259..1314
                     /locus_tag="VE783_05415"
                     /inference="COORDINATES: protein motif:HMM:NF021599.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2332 domain-containing protein"
                     /protein_id="HYX52869.1"
                     /translation="MAFQLSIPDLCLEQARWCQNLGSPLYAFLLNKCAADYEQGGPVR
                     DLLEPHKGDRKGTALPLRMMGAVHRLALTGEAPELARYYPTCGGEVDFPAAWRAFREV
                     LSKHLHELEQLVLRPVQTNEVGRCGALLGGFLEIARRTGLPLRLLEMGASAGLNLRWD
                     HYRYTWPGGAWGEAKSQVSIAEVFHGSAPEPCKVEIVKRRGCDPNPIDPASPEGRLTL
                     LSYVWADQVERLRMLESAIEVARDVPCHVDQARAAEWLPHQFAEPGTGAVTVLFHSVV
                     WQYLPHEEREAVRALIDTAAAKASAEAPFAWLRMEPGSDGAEVKLMIAPGLPDRRIAT
                     AGYHAPRVHWLLESDRT"
     gene            1334..1882
                     /locus_tag="VE783_05420"
     CDS             1334..1882
                     /locus_tag="VE783_05420"
                     /inference="COORDINATES: protein motif:HMM:NF037660.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HYX52870.1"
                     /translation="MQDQDTVEKLLQCAREARGDHRPDDARRDLVEAVRLCREAGERK
                     LLAAALTALGQVERDLGRRAEALRLYQEAAELYRGMDQPLRLAHTIRHVGDIHGEMKQ
                     FEQAEPFYAEALAIYRAHPEAAKLDLANALRGYALQREGVGESQQAAAMWREAGELYA
                     ACGVEAGVKESERRVARLRQHN"
     gene            complement(2482..5100)
                     /gene="gyrA"
                     /locus_tag="VE783_05425"
     CDS             complement(2482..5100)
                     /gene="gyrA"
                     /locus_tag="VE783_05425"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR01063.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003916 - DNA topoisomerase activity
                     [Evidence IEA];
                     GO_function: GO:0003918 - DNA topoisomerase type II
                     (double strand cut, ATP-hydrolyzing) activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006259 - DNA metabolic process [Evidence
                     IEA];
                     GO_process: GO:0006265 - DNA topological change [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA gyrase subunit A"
                     /protein_id="HYX52871.1"
                     /translation="MADDPNQQLPLNPPPGGGDGASGGNILPINIEEEMRRSYLDYSM
                     SVIIGRALPDVRDGLKPVHRRVLYTMQDMGLYYNKKHTKCAKVVGQTMGQFHPHGDAA
                     IYDTLVRMAQNFSLRYPLVDGQGNFGSVDGDPPAAMRYTECRLTRIAGALMEDIDKET
                     VDFVPNYDDTTVEPSVLPTRIPNLLVNGSNGIAVGMATNIPPHNLTEIVDAAILMVNN
                     PATTLKDVLKIVKGPDFPTGAYIYGRSGIAAAYERGRGRFMMRAKAGIEDVSQGRKAI
                     IVTEIPYQVNKSTLIKRIAELVNDKVIDDISDVRDESDRDGMRIVIELKRGAEAQIIL
                     NQLYKHTDMQMGFSMILLAVVNGQPKEMGLVQAIQHFIDHRIDVVRRRTVYLLEKARE
                     REHILEGYKMALDNLDAVIKLIRASGSRAEAKESLLAARFKIVDKEMQRRIGGAEGRL
                     SPKQADAILELQLYRLTRLSTEEILKELEEIRLKIAEYESILASDKKLRGVIVKELEE
                     VKKEFGDERRTEITDESTEITLEDLIADEQVAVTMSHTGYLKRTPISTYRQQRRGGTG
                     RTGMKTRDEDFVEYLFIASTHSYLLIFTNTGRVYWLKVYEIPDVGAAGKGKHIGNLVA
                     LQPGETVRTLLEVRDLEDENNFVFFVTRNGTVKKTPVKDFSNVMSRGIIAIGIEKEDE
                     LVAARLTDGNQLVFLASHEGMAIRFAEDDVRSMGRPAYGVRGMDLDKGDYIVGMAVTP
                     KELKKKTNGAGKDKVETDENEPSLILSVTEAGYGKRTPVEEYRLQSRGGKGVINVKTT
                     ARNGKVVSIMLVDESSEVILISQFGKILRTDTTTIREAGRSTQGVRLLQLEEGDKVAS
                     AAIIQEKEEEDPKLIQ"
     gene            complement(5436..6305)
                     /locus_tag="VE783_05430"
     CDS             complement(5436..6305)
                     /locus_tag="VE783_05430"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52872.1"
                     /translation="MYRLAVLALIAAFSFPLHAQMFSHGVPASVTSPTADGQLHGIPS
                     NVNSPTPDGQLHGVPSNVNSPTPIPPGVHVPLRQQILQGPHHRFGNGFGNGREHRTRV
                     IPVPVFYPIYGWGDPAYPIADPAVPAQPQQDPITAANQTNDASDDANADDQLKAAYLQ
                     GARDALRDTVARNGDSRSGSGDSRYRSSDSRYGEHYMDSREQTPSARVKSAPAPEPEP
                     EAAPAAKADPGPAAIFIFKDGHKIETHNYAIMGETLYDFSSTGLKRVQLADLDKDATL
                     KENDDRGISLKLP"
     gene            complement(6369..7508)
                     /locus_tag="VE783_05435"
     CDS             complement(6369..7508)
                     /locus_tag="VE783_05435"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52873.1"
                     /translation="MLNALKEFQIGRPQMLAGLMLLAFLAQALWIATSRRFSPLEYQY
                     IEAGLPHQPGQDFRVSSPLTSWVAGLPFRLARMSGNATITQAVIIPRPWLVRLPFVAF
                     GLWLGAAIWWVARRLFDDHGGYVALGLFCSSSAMVMISTNIGPEVILAWSSFGLIYTA
                     IGVAHTLYAPPKKWLPRIVLLGLSIGFCLSAAVWSMFLVALAIGFMLYLAPGRRRAVL
                     LVVTCAAAIGLGLYTFFTLTVGAPWVPTKSLITPHFSLEQVRSLAFPFSDGYLPVNSF
                     LFVALFIAALTSYGSWPRARYFGNSAPLLTAYAAVLLFSLPNSLHFWYATLGLSFVFT
                     FVGGVTADLLETGARRAVATTLFAGFALRTVLNLAALARWSRISG"
     gene            7586..7960
                     /locus_tag="VE783_05440"
     CDS             7586..7960
                     /locus_tag="VE783_05440"
                     /inference="COORDINATES: protein motif:HMM:NF017922.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF971 domain-containing protein"
                     /protein_id="HYX52874.1"
                     /translation="MASANPKSVKVNKTTGTGVDIEWDDGHRTHYTFQWLRDACPCAT
                     CTEERNNHNLKPGQAAPAANSLLPMYKEPVRPSEVTPVGRYAVNIAWNDGHASGIYSW
                     DYLRELCQCAECKAATTEPTVQ"
     gene            8112..>9434
                     /locus_tag="VE783_05445"
     CDS             8112..>9434
                     /locus_tag="VE783_05445"
                     /inference="COORDINATES: protein motif:HMM:NF012789.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UvrD-helicase domain-containing protein"
                     /protein_id="HYX52875.1"
                     /translation="MNLLDQLNPRQREAAETVEGPVLILAGAGSGKTRVITYRIAHLI
                     ENLGVDPDAILAVTFTNKASAEMVERVDHLLGGRMLRKPLISTFHSFCVRVLRRDIEA
                     LRVGDSGYKKDFAIYDDSDQQSIVKSIMRRLGVDDKQHKPSAVLSRISWAKNRMLDPQ
                     ELYLQSADPLTEKVAHIYEAYRKELRKANALDFDDLLLETVRLLKSSKDVRERYQRRF
                     QYLLIDEYQDTNRPQYELVKQLAGERHNLCVVGDEDQSIYSWRGADIRNILEFERDFP
                     EARVIRLEQNYRSTQNILEAASAVVANNVKRKGKTLWTARQGGSKIGYYEAPDGENEA
                     LFAADFISNWQRKAAEEGNEDSRIAVLYRLNSQSRLMEEAMRRYQLKYQVVGGFSFYE
                     RAEIKDMISYLKLINNPQDSIALLRVINTPARGIGKTTVETIERLSLET"
BASE COUNT         1961 a         2655 c         2857 g         1961 t
ORIGIN      
        1 agccttcagg aattttgatt tcggcaatgt caccgagctt gccggtggtg ggaccgagct
       61 gccagtcgat tttgacttcg ggctcctgct tttgcggttc cggcttgccc tgctcctgtg
      121 cgacgacacc caccgcaaaa cagcttgtga atgccagtac agccaagact ttctttaaca
      181 tgccttctca ctttccaggg ggtgggagta gcattctgct ctggaactat actttgagca
      241 agtacttttc attggggcat ggccttccag ctttctatcc ctgatctatg cctggagcag
      301 gcaagatggt gccaaaacct gggttcaccc ctttacgcct ttctgttgaa taaatgcgca
      361 gccgactacg agcagggtgg gccggtgcgc gatttgctgg agccgcacaa aggtgaccgt
      421 aaagggaccg cgcttccact gcgcatgatg ggcgccgtgc atcggctggc acttacgggg
      481 gaggcaccgg agctggcacg ttactatccc acgtgcggcg gtgaagttga ttttcccgcg
      541 gcgtggcggg cattccgtga ggtgctgagc aaacacttgc atgagcttga acagctggtg
      601 ctccggcctg ttcagaccaa cgaggtgggc cgttgcggcg ccctgctggg cggattcctg
      661 gaaattgcac ggcgaaccgg attgccgctt cgtctcctgg agatgggagc aagtgccggc
      721 ttgaatttgc gctgggacca ctatcgatac acatggccgg gcggcgcgtg gggagaggca
      781 aaatcgcagg tgagtattgc agaagtcttt cacggatccg cgccagagcc atgcaaagtt
      841 gaaattgtga agcgcagggg ctgtgacccc aatccgattg atccagcttc tcccgaagga
      901 cggctgactc tgctttctta tgtatgggcg gaccaggtgg agcgcctccg gatgctggag
      961 agcgcaattg aggttgcgcg cgatgttccc tgccacgtgg accaggcgag ggctgcggag
     1021 tggcttcccc atcaatttgc agagcccggg accggcgcag tgacggtgct ctttcattct
     1081 gtggtttggc agtacttgcc gcatgaggag cgcgaggccg tgagggcgct gattgatacg
     1141 gcggctgcca aggcgagcgc tgaggctccc ttcgcatggc tgcggatgga acccggaagt
     1201 gatggcgcgg aggtgaagct catgattgct cccggtcttc ctgaccgcag gattgctaca
     1261 gccggctacc acgccccgag agtgcattgg ctactcgaga gcgaccggac gtaagcggtg
     1321 ctaggctttt ggaatgcaag atcaagatac ggttgaaaag cttctccagt gcgcgagaga
     1381 agcccggggg gaccatcgcc cggacgatgc gcgcagagat ttggtggaag ctgtgcggct
     1441 atgccgagag gccggcgagc ggaagctgct ggcggctgcg ctcacggcgc tggggcaggt
     1501 tgagcgcgat cttgggaggc gggcggaggc gctacgctta tatcaagagg ctgcggagct
     1561 gtaccgcggg atggatcagc cgctgaggct ggcgcacacg atccgacatg tcggcgatat
     1621 tcatggagag atgaagcaat ttgagcaagc agaacctttc tatgcggaag cgctggcgat
     1681 ttatcgcgcg cacccggagg cggcgaagct ggacctggcg aatgcgctgc gggggtatgc
     1741 gctgcagaga gaaggagtgg gagagagcca gcaggcggcc gcaatgtgga gagaggcggg
     1801 cgagctatat gcggcgtgcg gagtggaggc cggagtgaag gagagcgagc ggagagtggc
     1861 gaggttgaga caacacaatt gaaacctctt acgcagttgg cgaacgtatg tttatctcgt
     1921 acaggaagca aacctcacca ctgatgacgc tgatagcact gatttacact gatcagaatc
     1981 ggtgccgtga catgtacgtg agacgtctga cccggccacg gcccgcgaaa gagcctttct
     2041 gtgaacgatc tcgaaaaaaa gattttgagg ctgcatggga aacggacaca tactcggggt
     2101 tcctctcttg cgcttagtcg ctttgctccc gcgcgctcgc tcggaatgac aaaggagtaa
     2161 atgccctttt acgcaggcat aaatgcctgc tccacccggg cgcggactag atttcgtcga
     2221 tgggccctca ccacaacgcc tgtcaggtcc gaagattcgt caccgcgaac gccggtgaca
     2281 gcgaaggcgg gtgaccgcga aggccgtccg cgaagactcg gtcacggcga agacctatca
     2341 ccgcgaagaa ctatgatcgc gaaggcaaga gcgcacgctc aagctagcgg ctacaagcaa
     2401 gaatcttcat aaaaaaaatg cccccgcttg cgcgagggca ttgtttagaa ctgcgagagc
     2461 cagtgattcg gcggcagtga actactgaat cagcttgggg tcttcctctt ctttttcctg
     2521 gatgatggcg gcggaggcta ccttgtcacc ttcttcgagt tgcagcaggc ggacgccctg
     2581 ggtggagcgg ccggcttcgc ggatggtggt ggtgtcagtc cgcaggatct tgccgaactg
     2641 gctgatgagg atgacttcag agctttcgtc gaccagcatg atggatacga ctttgccgtt
     2701 gcgcgcggtg gtcttgacgt tgatgacgcc tttgccgccg cgcgactgga gccggtactc
     2761 ttcgactgga gtgcgcttgc cgtaaccagc ctcagtgacg ctaaggatca ggctgggctc
     2821 gttttcatcg gtctcaactt tgtctttgcc ggcgccgttg gtcttcttct ttagttcctt
     2881 gggagtgacg gccatgccga cgatgtagtc gcccttgtcg aggtccatgc cgcgcacgcc
     2941 ataagcggga cggcccatgg agcgaacgtc gtcctcagca aagcggatgg ccatgccttc
     3001 atgcgaagcg aggaagacaa gctgattgcc gtctgtgagg cgggcggcga ccagttcatc
     3061 ttctttttcg attccgatgg cgatgatgcc gcgcgacatc acgttggaga agtctttcac
     3121 cggcgttttc tttactgtgc cgttgcgggt tacgaagaag acgaagttgt tttcatcttc
     3181 caggtcgcgg acttccagca gcgtgcgcac tgtctcaccg ggttgcagcg ccaccaggtt
     3241 gccgatgtgc ttgcccttgc cggcggcgcc gacgtcgggg atttcataca ccttgagcca
     3301 gtaaacgcgg ccggtgttgg tgaagatgag cagataggaa tgtgtggacg cgatgaagag
     3361 gtactcgacg aaatcttcgt cgcgcgtttt catgccggtg cgaccggttc cgccgcgccg
     3421 ctgctggcga taggtggaga tgggcgtgcg cttgagatag ccggtgtgtg acatggtcac
     3481 ggcgacttgc tcgtcggcga tgaggtcttc cagcgtgatc tcggtggatt cgtcagtgat
     3541 ttcagtgcgg cgctcgtcgc caaattcttt tttgacttct tccagctctt tcacgatcac
     3601 gccgcgaagc ttcttgtctg aggcgaggat ggattcgtac tcggcgatct tcaggcggat
     3661 ttcttccagc tccttgagaa tttcttcggt ggagagccgg gtgaggcggt aaagctgcag
     3721 ttcaaggatg gcgtcggctt gcttaggtga gagccggcct tctgcgccgc cgatgcgccg
     3781 ctgcatttcc ttgtcgacga tcttgaacct ggcggcgagc agggattctt tggcttccgc
     3841 gcgcgaaccg gatgcgcgaa tgagcttgat gacggcgtcg agattgtcga gcgccatctt
     3901 gtagccttcc aagatgtgct cgcgctcgcg ggctttttcc agcaggtaga cggtccggcg
     3961 gcggaccacg tcaatgcggt gatcgataaa atgctggatg gcctgcacga gccccatttc
     4021 tttgggctgg ccgttcacga cggcgagcag gatcatgctg aagcccatct gcatgtcagt
     4081 gtgcttatag agctggttca ggatgatctg cgcttccgcg ccgcgcttca gttcgatgac
     4141 gatgcgcatg ccgtcgcggt cggattcgtc gcggacgtcg ctgatgtcat cgatgacttt
     4201 gtcattgacg agttcggcga tgcgcttgat cagagtggat ttgttcacct gatacggaat
     4261 ttctgtgacg atgatggctt tgcggccctg gctcacgtct tcaatgccgg ccttggcgcg
     4321 catcatgaag cgtccgcggc cgcgctcgta agcggcggcg attccactgc ggccgtagat
     4381 gtaggcgccg gtggggaaat cggggccctt tacgatcttc aggacgtctt tgagcgtggt
     4441 ggccggattg ttgaccatca ggatggctgc gtcgacgatt tcggtgaggt tgtgcggggg
     4501 gatgttggtc gccatgccta cggcgattcc gtttgacccg ttgacgagaa gattggggat
     4561 gcgcgtcggg aggacggagg gctcgaccgt ggtgtcgtcg tagttgggga caaagtcgac
     4621 ggtttctttg tcgatgtctt ccatcagcgc gccggcgatg cgggtaaggc ggcactcggt
     4681 gtatcgcatg gcggcgggcg gatcgccatc cacggagccg aagttgcctt ggccatcgac
     4741 gagtgggtag cggagagaga aattctgcgc catgcggacc agcgtgtcgt agatcgcggc
     4801 gtcgccgtgg ggatggaact ggcccatcgt ctggccgacg accttcgcgc acttggtgtg
     4861 cttcttgttg taatagaggc ccatgtcctg catggtgtag agcacgcggc gatgcaccgg
     4921 cttcagtcca tcacgcacat ctggcagcgc gcgcccgatg atgacgctca tggaatagtc
     4981 caaataagag cgccgcattt cttcttctat gttgatcggc aaaatatttc cgccggatgc
     5041 gccgtcccct ccaccaggag gaggattcaa tgggagctgc tgatttggat cgtctgccat
     5101 agtctctttt ctcgattact gacgaagcgc gattgaactt gtgaccttct ggattcgtgc
     5161 ccgcaagggc acacttcaag cgcggttgcc ggccccctta cgaccgccga aatttccgct
     5221 aaatgcttgc atttacagga tgttatatgc cagaggaata cagccaatta tagcacagag
     5281 agagcctctg ctgcgagtgc agagcttcgc cagatttccg ctcgctaagg gagtcgattg
     5341 taacctcgcg cgtggccgca gaaggcattt ccggatcagc tacgtctaca tattttcgtt
     5401 caggagcctc gaacatctag cagctcgcag cttctttacg gcagcttcag cgaaatcccg
     5461 cgatcatcgt tttctttcag cgtggcgtct ttatcgagat cagcaagctg cactctcttc
     5521 aggccggtgc tggagaagtc gtaaagcgtc tcgcccatga tggcgtagtt atgcgtctca
     5581 atcttgtggc catccttgaa gatgaaaatc gccgccggac cgggatccgc tttcgctgcg
     5641 ggtgcggctt ccggctctgg ttcaggagca ggcgcgctct tcactcgcgc tgaaggcgtc
     5701 tgttcgcgcg aatccatgta gtgctcgccg tagcgcgaat cgctcgaccg ataccgcgaa
     5761 tccccggaac cggagcgcga atcgccattg cgagccactg tatcccgcaa cgcatcccgc
     5821 gcgccctgta gatatgcggc cttaagctga tcgtcagcgt tcgcgtcgtc gctggcatca
     5881 ttcgtctggt tcgcagcggt gatcggatcc tgctgtggct gcgctggtac tgccgggtcg
     5941 gctatcggat acgccggatc accccagccg taaatgggat aaaaaaccgg aaccggaatc
     6001 actcgcgtac ggtgctccct tccgttacca aacccattac caaaacgatg atgaggtccc
     6061 tggaggatct gctgccgcaa tggcacatgc acgcctggcg gaatcggtgt tggtgaattc
     6121 acgtttgagg gcacgccatg cagctgccca tcgggcgtag gcgagttcac gttagaaggg
     6181 ataccgtgaa gctgtccatc ggccgtgggt gaagttacgg atgccgggac gccgtggctg
     6241 aacatctgag cgtgaagcgg gaatgaaaaa gcagctatga gtgcgaggac ggccaatcgg
     6301 tacattgaaa cacctgcctt tcagcggtgc tacctacata ctatgatgac gcaagaggcc
     6361 cctccggctc aaccagaaat tctgctccac cgcgccaggg ctgccaaatt cagaacggtt
     6421 cggagcgcaa atcctgcgaa caatgtggtc gccaccgccc gcctggcgcc agtctccaac
     6481 aggtcagccg ttacaccgcc aacaaatgta aacacaaagc ttaaccccag agttgcgtac
     6541 cagaaatgta aagaattggg aagcgagaac agcagcacag ccgcataggc cgtgagcagc
     6601 ggcgccgaat tgccaaagta ccgggcccgc ggccagcttc cgtaactggt aagcgccgca
     6661 atgaatagcg ctacaaaaag aaagctgttt accggcaaat aaccgtcgct gaaagggaag
     6721 gcaaggctgc gcacctgctc caggctgaaa tgcggagtga tcaggctctt tgtgggcacc
     6781 cagggcgcgc ccaccgtcaa ggtaaagaac gtgtaaagcc ccagcccaat tgccgctgca
     6841 caggttacca ccagcagcac ggctcttctg cgacctggtg ccagatagag catgaaaccg
     6901 atcgccaaag ccaccagaaa cattgaccac accgccgctg agaggcaaaa gccaatcgag
     6961 agccccagca gcacaatgcg cggcagccat ttctttggcg gggcatagag cgtatgggcc
     7021 acgccaatcg cggtatagat cagcccaaag ctgctccagg ccagaatcac ctccggccca
     7081 atgttggttg aaatcatgac catggcagaa gaagagcaga atagccccag cgccacgtaa
     7141 ccgccgtgat cgtcaaacag ccgccttgcc acccaccaga tcgccgctcc cagccacagc
     7201 ccaaacgcca caaacggcag ccgcaccagc cacggccgcg ggataatcac tgcctgcgtg
     7261 atcgtggcat tgccgctcat tcgtgccagc cggaaaggca gcccggccac ccaactcgta
     7321 agcggcgagc tcactcggaa gtcctgcccc ggttgatgcg gcagccccgc ttcaatgtac
     7381 tgatattcca gaggagagaa cctgcggctg gttgcaatcc agagcgcctg cgccaaaaac
     7441 gcgagcagca tcagcccggc caacatctgc ggccggccaa tctgaaactc tttcagcgcg
     7501 ttgagcatga accctcattt gtaattgagc gcgcgctcca ccgtccacag gttaggcctg
     7561 cttgcttgtg cgatactgaa aagaaatggc cagcgccaat cccaaatcag taaaagtgaa
     7621 caaaaccacc ggtactggtg tggacattga gtgggacgac ggccaccgca cccattacac
     7681 ctttcagtgg ctgcgcgacg cctgtccgtg cgccacctgc acggaagagc ggaacaatca
     7741 caacctcaag ccgggccagg ccgccccggc cgcgaactcg ctcctgccca tgtataagga
     7801 gcctgtccgg ccaagtgagg tcactccggt aggccggtac gccgtgaaca ttgcctggaa
     7861 tgacggccat gccagcggaa tctattcctg ggattacctg cgtgagcttt gccagtgtgc
     7921 ggaatgcaag gcggcgacca cggagccgac ggtgcaatga tcgggatgtt ctacggaatc
     7981 ggattatcgg tatatcggtg tatcggtata tcgaatgata agaccgtcaa cggctggccg
     8041 cttgtcccaa aaactcgggc gttggaaaac ccgttatccc gatatcccgt tatcccgata
     8101 tcccgatccc aatgaacctg ctcgaccaac tcaatccccg gcagcgtgag gcggcagaga
     8161 ccgtcgaagg accggtgttg attctggcgg gagcaggcag cggcaagact cgcgtcatca
     8221 cctatcgaat cgcgcacctg attgaaaatc tcggagttga tcccgacgcg atcctagccg
     8281 tcacctttac caacaaagct tcggcagaga tggtggagcg cgttgaccat ctgctgggtg
     8341 gccgcatgct gcgcaagccg ctcatctcca ccttccattc tttttgcgtg cgcgtgctgc
     8401 ggcgcgatat cgaagcgctg cgcgtcggtg actccggcta caagaaagac ttcgccatct
     8461 atgacgactc tgaccagcag agcatcgtca agagcatcat gcgccgcctg ggcgttgacg
     8521 ataagcagca caagccttcc gccgtgctct cccggatttc ctgggccaag aaccgcatgc
     8581 ttgatccgca ggaactctat ttacaatcgg ccgatccgct tacggagaaa gtcgcgcaca
     8641 tctatgaggc ctaccgcaag gagctgcgca aggccaacgc gctcgatttc gacgatctcc
     8701 tgctggagac cgtgcggttg ctgaaatcgt cgaaagatgt ccgcgagcgc taccagcgcc
     8761 gctttcaata tctgctcatc gatgaatacc aggacaccaa ccgtccacaa tacgagttgg
     8821 taaagcagct cgctggtgag cgccacaacc tttgcgttgt cggcgatgaa gaccagtcca
     8881 tctattcatg gcgcggcgcc gacattcgca acatcctcga attcgagcgc gacttccctg
     8941 aagcccgcgt catacgcctt gaacagaact atcgttccac gcagaacatt cttgaggcgg
     9001 cgtcggccgt ggtggccaac aacgtaaagc gcaaaggcaa gaccctgtgg accgcccgcc
     9061 agggtggcag caaaatcggc tattacgaag cgccggatgg cgagaatgaa gcgctctttg
     9121 ccgccgactt catctccaac tggcagcgca aagcagccga ggaaggcaat gaagattcgc
     9181 gcatcgccgt gctctaccgg ttgaactcgc agtcacgcct catggaagaa gccatgcgcc
     9241 gctatcagct caaatatcag gtcgtcggcg gctttagctt ctacgaacgc gcggaaatta
     9301 aagacatgat cagctacctc aaactgatca acaatcctca ggactcaatc gcgctgctgc
     9361 gtgtcatcaa cacgccagcg cgcgggatcg gcaagaccac ggtggagacc atcgagcggc
     9421 tctcgctgga gacc
//
LOCUS       DASQYP010000171         8241 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_154593, whole genome shotgun sequence.
ACCESSION   DASQYP010000171 DASQYP010000000
VERSION     DASQYP010000171.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 8241)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8241)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8241
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_154593"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(168..626)
                     /locus_tag="VE783_05450"
     CDS             complement(168..626)
                     /locus_tag="VE783_05450"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HYX52876.1"
                     /translation="MKVERPITLVVEDDDADFQLLQAAVRRTPGDVQIHRVDDGEAAV
                     AYLAGENDFSDRSRFPLPHLVLMDIKLPRRSGLEVLQWLRQQPGICRMPVIMFTSSRH
                     SVDVNRAYDYGASAYFSKPETMKELTEMLGALKHVWSRWIEFPSLEKRPN"
     gene            complement(723..2258)
                     /locus_tag="VE783_05455"
     CDS             complement(723..2258)
                     /locus_tag="VE783_05455"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain-containing sensor histidine kinase"
                     /protein_id="HYX52877.1"
                     /translation="MPANLKPAAHGQPETTNKTPEKLHTEKAFRLLVEGIQDYAIFLL
                     DPNGHVASWNPGAERMKRYRPEEIIGQHFSVFYTEPDLAIRKPWHELEVAAQTGRYED
                     EGWRLRKDRTRFWANVVITVIRDEDGTLLGFGKITRDLTDRREAEIRHRLLIEGVSDY
                     AIYSLDPTGVITSWNTGAERIKGYSTDEILGRHFSTFYTPEDAAAGMPAHVLKTAAET
                     GHFEGEGWRVRKDGTRFWSSVVVTAIRDEAGQLMGFSKITRDVSDRKKLLDTIQRHAE
                     ELELRIAEREQTNAELEAFSYSVSHDLRSPLRAIEGFADMIVTDFGAELPEQVKTYLG
                     QISGATRRMNRLVQDLLEYSRLSRIDLHPTAADVGLLMEDARQQLEESQRVSVRVNVP
                     AGLRAFVHPSTMTQIFYNLMTNGLKFYPPGKEPHVDISAERVRGKVRIMVRDEGIGIP
                     REHHERVFQVFERLHSATKYPGTGIGLAIVKRGITRMGGTVSLQSEPGKGSTFTIEVP
                     EVA"
     gene            2450..2821
                     /locus_tag="VE783_05460"
     CDS             2450..2821
                     /locus_tag="VE783_05460"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HYX52878.1"
                     /translation="MTAAPPTVLIVDDDPLHITLYKWMMGKEGFNAAGAQVQSDSVDW
                     PKEEQVDVVLLDYRLNSALTAPKVAAMVKERYAAPVIVLSEMPWLPDDMREHAQGFVR
                     KGEPAQLMKAIADAVAPKTKT"
     gene            2953..4239
                     /locus_tag="VE783_05465"
     CDS             2953..4239
                     /locus_tag="VE783_05465"
                     /inference="COORDINATES: protein motif:HMM:NF015531.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S41 family peptidase"
                     /protein_id="HYX52879.1"
                     /translation="MRFSRQIAIALATLLCAVGMAAAQAPKLDAKTQAEVVNKIAESL
                     RDNYVFPDVAEKAGKLVQAEQSKGAYANVTNVQEFAERLTHDLQSVSHDKHMRVFMAP
                     PEPKEKEDPAQQELRFIHQDSRNNFGFVKLERLSGNVGYLDLRGFSPAQYGGPTAIAA
                     MNFLANSDAVIIDLRKNGGGDPSMIQLISSYFFKDATHLNNLYWRKGDHTDQFWTSPY
                     VSGKKMADTPLYVLTSARTFSGAEEFTNNMKVLKRAKIIGETTGGGANPGGFFPLAAG
                     LGMFIPTGRAVNPVTGKNWEGTGVEPDEKVPAADAFNVAYKEALKGIEESSKDEQAKA
                     DAAWARFALEAQMKPVKLSNEDLAKIAGNYGTRHVTAEQGQLYLQLGDGPRRKLSALT
                     PDTFVPEGAEAPRLKFASGKLTEMFPDGMSRELSRD"
     gene            4397..6805
                     /locus_tag="VE783_05470"
     CDS             4397..6805
                     /locus_tag="VE783_05470"
                     /inference="COORDINATES: protein motif:HMM:TIGR03434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ADOP family duplicated permease"
                     /protein_id="HYX52880.1"
                     /translation="MASSISQAWRSWKSAKVVACMAVIALATGIGCATAIFTVANTVL
                     LKPLPYSFPDRWVTLFGASDLSTETDRISAFSLEDLSKYQDRTRSFDVFGWYYLAGDY
                     NLTSPGAPEHLSGSQVTPSLILNAGVSPILGTLFHDSDGPQVALISSGLWNRLGRDPK
                     LVGKPLTIDGKSYTVMGVMPAWFQLPLVSVSSTDPHNDLWIPVPPRTDAGERSMALYV
                     AYARLKPGVTMAQARQDVEQVAAEIRREQGPDSHYTVKLFALKDFVARDIRPILMLFF
                     AAAALLLLVTCANVSGLLVAKAVGRAQETAIRVALGVKRFQLAVQFFLEGCSISVAAA
                     ILGLLASIALTRLVVVFAADYIPRADEVSVDGTVLFFAAVLGFITALLPAFAPLWQAL
                     RTHPTELLNGGVRASAGSRSRWLSRTLVIGEVALAFLLLTVGGLLVSEVRNLQRQWPG
                     FEPDHLVAFHLNAGAPASNAEFIAYQNKLIATLEAIPGVTGAAFANQLPLEGCCLGTT
                     LVPEGETPRPDFQEAASFMIVSPGYFKTMRIPLHRGRLLTADDNHEDPLPVVINETLA
                     RRNWPDRDPVGAYARASGNGSRVQVVGVIGDVLNQGLGQEARPEFYLLDAVAPVSEMH
                     FVVRTPLATASIFPAIRQAMQRVDPSHPIFAIEGMEEIARQSITTQTFASVVIAFFAL
                     AALLMAALGIYSLTYYAVRERTVEIGTRMALGAIRSDILRLILVSGWRMAAFGIPLGA
                     AAAIGATWLLMRFIHLHHVTPLPYVWSAVAVGALTTVASAFPAWLATLVTPMAAIRNN
                     AEPL"
     gene            complement(6828..7220)
                     /locus_tag="VE783_05475"
     CDS             complement(6828..7220)
                     /locus_tag="VE783_05475"
                     /inference="COORDINATES: protein motif:HMM:NF024769.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdeI/OmpD-associated family protein"
                     /protein_id="HYX52881.1"
                     /translation="MPPELAAQFLRRKRLHKYFLSLPQGVRDWITGTITEAKKPATRL
                     RRAERAIEWLMEVMEAERDLPPAFVRAFARNSKARQGWDAMPRGRRQMYLLTIFESRY
                     DDTRADCLKRAINEMAQYADELKRFPPR"
     gene            8047..>8241
                     /locus_tag="VE783_05480"
     CDS             8047..>8241
                     /locus_tag="VE783_05480"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52882.1"
                     /translation="MSFQTFARLEHLLQDLRYSVRMLRRNSGFAAVTIATLALGIGMT
                     SAMFSVVNGVLLKPLPYPDAD"
BASE COUNT         1646 a         2341 c         2505 g         1749 t
ORIGIN      
        1 ccatgcggcg aaactccgcc atggctagtt gcgcgtcaga agctacgtct tcgaggtaga
       61 gaacggggct tggcataggc tcgtactgcg actaaaaagt tttaaataaa tctaattcga
      121 cgtcaagaag ttgaaacacc tgagaatgca aaaatgtact caggtactta gttcggccgc
      181 ttctccaggc tgggaaactc aatccatcgt gaccagacat gtttcagggc gcccagcatt
      241 tcggtgagtt ccttcattgt ctccggcttg ctgaagtagg cgctggcccc atagtcatag
      301 gcgcgattca cgtccacgct gtggcgtgac gaggtaaaca tgatcaccgg catgcggcag
      361 atgccgggtt gctggcgcag ccactgcagc acttccaggc cggaacgccg cggcagcttg
      421 atatccataa ggactaagtg aggcagcgga aagcgggagc ggtcagagaa gtcgttttcg
      481 ccggcaagat acgcgacggc agcctcgccg tcgtctacgc gatgtatctg gacatcgccg
      541 ggcgtgcggc gaacggcagc ctgtagaagc tggaaatccg catcatcatc ctccaccacc
      601 agagtgatgg gacgttcaac cttcatttgc accgccagaa ccacggaatt ctccaggaag
      661 tgaaggacgg aaattgcggc aagccggcga gacgggcagg cagctcaggc cgcgcactct
      721 cattatgcca cctccggcac ttctatggtg aaagtgctgc cttttcccgg ctcagattgc
      781 agtgagactg tgccgcccat gcgagtgatt ccgcgtttta caattgccag cccgatgccg
      841 gttccgggat atttggtggc tgagtgcagc ctctcaaaaa cctggaagac gcgttcatgg
      901 tgctcgcgtg gaatcccaat gccctcatcg cgcaccatga tgcgcacttt tccgcgaact
      961 ctctccgccg aaatgtccac gtgcggctct ttaccgggcg ggtaaaactt aagcccgttc
     1021 gtcatgaggt tgtaaaaaat ctgcgtcatg gtagacggat gcacaaaggc ccttagtccc
     1081 gccggaacat tcactctgac gctgacgcgc tgtgactctt caagttgctg gcgcgcatct
     1141 tccatcagca atcccacgtc ggctgcggtg ggatggagat caatccggct caggcggctg
     1201 tactccagca ggtcctgcac cagccggttc atgcgcctgg tggcccccga aatctggccg
     1261 aggtacgtct tcacctgttc gggaagttcc gcgccgaagt cggtgacgat catgtcagca
     1321 aagccttcaa tcgcgcgcag cggtgaccgc aaatcatgcg agaccgagta gctgaaggct
     1381 tccagctctg cgttagtctg ctcgcgctcg gcaatgcgca gctccagttc ctccgcatgc
     1441 ctttgaatgg tatcgagcag ctttttgcgg tcgcttacgt cgcgcgtgat cttggaaaag
     1501 cccatgagct ggccggcttc gtcgcggatg gcagtcacca ccacgctcga ccagaaacgc
     1561 gtgccgtcct tgcgcacgcg ccagccttcg ccttcaaagt gcccggtttc ggcagcggtt
     1621 ttcagcacat gggcgggcat gccggcggca gcgtcttccg gcgtgtagaa cgtggaaaaa
     1681 tgccggccca ggatttcatc cgtgctatag cccttgatgc gctcggcgcc ggtgttccag
     1741 ctcgtgatca caccggttgg atcgagtgag tagatggcat agtctgagac gccttcaatc
     1801 agcagccggt ggcggatctc ggcttcgcgg cggtcggtca ggtcgcgcgt gatcttgccg
     1861 aaaccgagca gagtgccgtc ctcatcgcgt ataactgtga tcaccacgtt ggcccagaag
     1921 cgcgtgcggt ccttgcgcag gcgccaacct tcgtcttcat agcggccggt ctgggcggca
     1981 acttccagct cgtgccaggg cttgcggatg gccaggtccg gttcggtata gaaaacgctg
     2041 aagtgctggc cgatgatctc ttccggacga tagcgcttca tgcgctcggc gccgggattc
     2101 caggaggcca cgtgaccatt ggggtcgagg agaaaaatgg cgtagtcctg aataccttcc
     2161 accagcaggc ggaatgcctt ctctgtatgc agcttctcag gagttttgtt cgtggtttcc
     2221 ggttgcccgt gagctgccgg cttcaggttg gcaggcattg tacctcttca atgttttaat
     2281 ggattccctg accatcccgc accgccgcag cgtgaatcca aacagaactg gtgctaaatc
     2341 aggtgggatg tggctctcat ccggttgtgt tggccctgct tcacaaaaat ttaccatgcg
     2401 ccacgagcgc atcgtccggc gatattttaa cctaaagagt gatacctgaa tgactgccgc
     2461 acccccaacc gtcctgattg ttgatgatga cccgctgcac ataacactct acaagtggat
     2521 gatgggcaaa gagggtttca acgcggccgg cgcgcaggtt caaagcgatt cagtcgattg
     2581 gcccaaggaa gaacaggtgg acgtggtcct tctggactac cgactcaata gtgccctcac
     2641 ggccccgaaa gttgctgcaa tggtaaaaga gcgttacgcg gcgccggtga tcgttctttc
     2701 agaaatgccc tggcttcccg atgacatgcg cgagcatgcg caaggctttg ttcggaaggg
     2761 ggagcctgcc cagttgatga aggcgatcgc agatgcggtg gcgcccaaga ccaaaaccta
     2821 gctttacacc ctgcctcacc agcggctgac cctggccgaa ttcatgtcat tcagagttgc
     2881 gctctgctca ccggcagaac acctgatcgt ctatcatctg gcacaagaaa tcccgttgtt
     2941 tggagatatg cgatgagatt ctcccgccag atcgctattg ccctcgccac attgttatgc
     3001 gccgttggca tggccgccgc gcaggccccg aagcttgacg ccaagacaca agctgaggtc
     3061 gttaacaaga ttgccgagtc gctgcgtgat aactatgttt ttcctgacgt cgcggaaaaa
     3121 gccggcaagc tcgtgcaggc cgaacagagc aagggagcgt acgcgaacgt aacgaatgtg
     3181 caggaattcg cggagcggct cacgcacgat ctgcaaagcg tgagccacga taagcacatg
     3241 cgcgtcttta tggcgccccc ggagccgaag gagaaggaag accctgcgca acaagagttg
     3301 cggtttatcc accaggattc gcgcaacaac ttcggctttg tgaaactgga gcggctctcc
     3361 ggaaacgtgg gctatctcga cctgcgtggc ttttcgccgg cgcagtatgg cggcccgacc
     3421 gccattgcgg cgatgaactt cctggcgaac tctgacgcgg taatcattga cctgcgcaag
     3481 aacggcggcg gcgatcccag catgatccag ctcatcagct catacttctt caaggacgcc
     3541 acgcacctga acaacctgta ctggcgcaaa ggcgaccata ctgaccagtt ctggacatcg
     3601 ccttacgtca gcggcaagaa gatggcagac actccgctgt acgtgctgac cagcgcgcgc
     3661 acgttttccg gcgccgagga attcaccaac aacatgaagg tgcttaagcg cgcaaagatc
     3721 attggcgaga ccacgggcgg cggcgccaat cccggcggct tcttccctct tgcagccgga
     3781 ctgggaatgt ttattccaac cgggcgcgcg gtgaatccgg tgaccggcaa gaactgggaa
     3841 ggcactggcg ttgagcctga cgagaaagtt ccggcggccg atgcattcaa tgtcgcatac
     3901 aaagaggcgc tgaaagggat tgaggaatcg tccaaagatg agcaggcaaa agcggatgcc
     3961 gcgtgggcaa ggtttgccct ggaagcccag atgaagccgg tcaagctctc gaatgaggat
     4021 cttgcgaaaa tcgcaggcaa ttacggaacc aggcacgtga cagcggagca gggccagctt
     4081 tatctgcaac tgggtgacgg gccgcggcgg aagctctcag ctctcacccc agacaccttt
     4141 gttcccgaag gcgcagaggc gccgcggcta aagtttgctt ccggaaagct gaccgaaatg
     4201 ttcccggacg ggatgtcccg tgagctgagc cgggactaga tgaggtacaa acacaagagc
     4261 tgattgctct atctcgtagc gcttattttg gttcgctttt gaggtgggac cgcgcgcctg
     4321 tgccaaaggg cacatcggga aacccaggct gcttgccggc aaaagggtgc tccgccggtt
     4381 gtatgatttg aaggctatgg catccagcat ctctcaagcg tggcggtcat ggaagagcgc
     4441 gaaagtggta gcgtgcatgg ccgtgatagc acttgccacc ggaataggtt gtgcgacagc
     4501 catcttcacg gtagctaata cggtacttct gaagcctctg ccctactcgt tccctgatcg
     4561 atgggtgact ttgtttggcg cgtctgactt atctaccgaa accgaccgga tcagcgcttt
     4621 ttctttggaa gacctgagca agtaccagga tcgcacccga agctttgatg tatttggctg
     4681 gtactatctc gccggcgact acaacctgac ttcgccgggc gctccggagc atctcagcgg
     4741 ctcacaggta actccttctc tcattctgaa tgcgggcgtg agccccatcc tgggcacgct
     4801 gtttcatgat tctgatggcc cgcaggtagc gttgatttcc agcggcttgt ggaatcggct
     4861 gggcagagat ccgaagctgg ttggaaagcc gctgacgatc gatggcaagt cttacaccgt
     4921 gatgggagtc atgcccgcat ggttccagct tcccctggtg agcgtttcca gcaccgatcc
     4981 acacaatgac ctctggattc ctgttcctcc gcgaacggat gccggagaac gctcgatggc
     5041 gctttatgtg gcttacgcca ggctgaagcc aggtgtgaca atggcgcagg cgcggcagga
     5101 tgttgagcag gtggccgcgg agatcagaag agagcaagga ccggacagcc attacacagt
     5161 aaagctgttt gcgctgaagg acttcgttgc gcgcgacatc aggccgatac tcatgttgtt
     5221 tttcgcggct gcagcgcttc tgctcctggt gacttgtgcc aacgtatccg ggctgctggt
     5281 agcaaaagcg gtgggccgtg cccaggaaac cgcaatccgc gtggcactcg gggtaaaacg
     5341 ctttcaactg gccgtgcagt ttttccttga agggtgctcc atctctgttg cggccgctat
     5401 tttgggtctg ctggccagca tcgcactcac gcggctggtg gttgtgtttg cggccgacta
     5461 catcccgcgc gccgatgagg tctcagtgga tgggacggtt ttattttttg cggcggtact
     5521 gggtttcatc accgccctgc tgcccgcctt cgcaccgttg tggcaggccc tgcgtacgca
     5581 cccgacggaa ttgctgaacg gcggagttcg cgcatcggct ggttcgcgca gccgctggct
     5641 ctctcgcacg cttgtgatcg gagaggtcgc gcttgccttc ctgctgctta cggtgggcgg
     5701 ccttctggtc tctgaagtca gaaatttgca gcgccaatgg ccgggctttg aacctgatca
     5761 tctggtggct tttcatctga acgccggggc tcctgcttcg aacgcagaat tcatcgccta
     5821 ccagaacaag ctgatcgcca cgctagaagc catccccggc gtgaccggtg cggcgttcgc
     5881 gaaccaactg ccgctggagg gctgctgcct gggcaccacc ctggtgcctg aaggagaaac
     5941 tcccaggccg gactttcagg aagcggccag cttcatgatc gtgagccccg gatatttcaa
     6001 gacgatgaga attccgctgc atcgcggccg gctcctgacc gccgatgata atcacgagga
     6061 cccgctgccg gttgtgatca atgagacact ggcgcggcgg aactggcctg atcgcgatcc
     6121 ggtgggcgct tacgcacggg caagcgggaa cggctctcga gtgcaggtgg ttggcgtaat
     6181 tggagacgtg ctcaaccagg gcctgggcca ggaggcgcgg ccggaattct acctgctgga
     6241 tgcggttgcg ccggtatctg agatgcactt cgtggtgcgc actccgctcg cgacggccag
     6301 tattttcccc gcgataagac aagccatgca gcgcgtggac ccgagccatc cgatttttgc
     6361 gattgagggt atggaggaga ttgcgcgcca atccatcact actcagacgt tcgcttcggt
     6421 agtgattgca ttcttcgctc ttgcggcgct cctgatggca gcgctcggaa tatacagcct
     6481 gacgtactac gcggtgcgcg agcgcacggt ggagattggc acgaggatgg cgctgggcgc
     6541 aatccgcagc gacatcctgc ggctgattct ggtaagcggg tggcgcatgg ctgctttcgg
     6601 tatcccgcta ggcgcggctg cggcgattgg agctacctgg ctgctaatgc ggttcatcca
     6661 tcttcaccac gttacgcctt tgccttatgt gtggtccgcg gttgcggtgg gagctctcac
     6721 cacagttgca tcagcgtttc cggcgtggct cgcaacgttg gttactccca tggctgccat
     6781 tcgaaataat gcggagccac tatagcctga cccaatcacg aagttgatta cctcggcggg
     6841 aagcgtttca gttcgtcggc gtactgggcc atttcgttga tggcgcgctt gaggcagtcg
     6901 gcgcgggtgt cgtcatagcg actctcaaag atggtcagca ggtacatctg acggcggccg
     6961 cgaggcatgg cgtcccagcc ctggcgggct ttggaatttc gtgcaaaggc gcggacgaag
     7021 gccggcggaa gatcacgctc ggcttccata acttccatca gccactcgat agcgcgttca
     7081 gcccggcgca ggcgggtggc cggcttcttc gcctcagtga tggtgccagt gatccagtcg
     7141 cgaacgcctt gtggaagcga gagaaagtat ttgtggaggc gcttgcgacg gaggaactgg
     7201 gcggcgagtt cgggaggcat tggaaaaatc ttaccgttga tgacgctgaa tcgggacgga
     7261 tttgcgctgg gatgctggca agcttgactc ccggggtcat cgcgcgcgaa agcgccggat
     7321 ggggggaaac aaggcacgca ggagtgctcg ttcttgttca ctttcttcag tcgctcagga
     7381 caggctcttc gcacagtgcc tagcgtgggg aaagccggaa cgtgaaaagt ccgccaacat
     7441 gcatgggcca gaactccctc tgccaccatg gcgcaggacg catcctcggg atctttcgac
     7501 tccgccttag tcgcgttgct cccgcggcgt tcgctcaaga tgacagaggt agagtgagat
     7561 cattgtcgcg gcccataaag ggccgcgctt ccaccgtgcg cagccgaggg cggctgcgcc
     7621 acacaatcat ctgtcaggct ctcacggcga tgtcggctca cgcgaagctg cagcggagcc
     7681 ggttcctcac cacctcgcct cagcaaagcc tcggctcggg attcggaatg ggtccttcag
     7741 agggggaatc gattgcagga agtcagctgt cttggaagag gacgcaagac gcagccgagg
     7801 gcggctgcgc tacacagtga tctgtcaggc tctcacggcg acgtcggctc acgcgaagct
     7861 gcagcggagc cggttcctct caccccaaca aagcaacagc ggctttgttg ggggcccggt
     7921 tcctttagag ggggagctgt ggtatcggct tgagacagtc gagaggggta cgtcttcttg
     7981 cattgcgggg agatgaaaag tgccgctcgc gggaatacca tgttctcgtc tcagtgaggt
     8041 ggggccatga gcttccagac ctttgccagg cttgaacatc tgctacaaga cttgcgctat
     8101 agcgtgcgca tgctgcgccg caattccggg tttgcggcgg tcaccatcgc cacgctcgcc
     8161 ctgggaatcg ggatgacctc ggcgatgttc agtgtggtga atggcgtttt gctcaagccg
     8221 ttgccgtacc cggatgccga c
//
LOCUS       DASQYP010000172        11334 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_91365, whole genome shotgun sequence.
ACCESSION   DASQYP010000172 DASQYP010000000
VERSION     DASQYP010000172.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 11334)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11334)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11334
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_91365"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            178..633
                     /locus_tag="VE783_05485"
     CDS             178..633
                     /locus_tag="VE783_05485"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HYX52883.1"
                     /translation="MPSPVLYLEDVASDAQLAMAEFRRMGVGERVMHMRDGGELLSYL
                     QGIDEPLGGRRNPVPALVILDLGLPEIHGMQLLNMLRSRRSLRRIPVVIFSGSEDPSV
                     ISAAYDAGACSFVWKSGEITKFRNALHSIVEYWTKLNRVPGENHSQPHN"
     gene            864..1679
                     /locus_tag="VE783_05490"
     CDS             864..1679
                     /locus_tag="VE783_05490"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HYX52884.1"
                     /translation="MKHHIISGAASGIGYELARVLLARGDAVMACDLKLEPMAQLSSA
                     TTAAENLQIRKLDVRDPARWEAIMQEAGSLWPRIDTVMNVAGVMRVGSIEEITPEDVD
                     FHFDINCKGVIHGTQAAFRAMRNQADQNGRGHIINIASLAGISPIPGASLYSASKFAV
                     RGYSLSVMPELKKFGIALTVVCPDAVATPMTAPFHHKPEAALIFSGSRLLQIPEVVRA
                     IVDHGLEKRPVELTMPKSRAILTKLAGALPGLATKLFMESLTKQGRKKQAALP"
     gene            complement(1810..2310)
                     /locus_tag="VE783_05495"
     CDS             complement(1810..2310)
                     /locus_tag="VE783_05495"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52885.1"
                     /translation="MPIYRRKLPHLERDGGSYFITFRTRDDLALSEEAKWLVLEHCVY
                     DDGKRYELESVVVMSTHVHLILTPLPEGLGYFRLATIMKGIKGASSHSVNKLLKRKGS
                     LWIDESFDHLIRSEGDFEDKTLYIAMNAVETGARSPQEYPWYWRRGMRKPKRKQKIKD
                     PWLIGE"
     gene            complement(2502..3128)
                     /locus_tag="VE783_05500"
     CDS             complement(2502..3128)
                     /locus_tag="VE783_05500"
                     /inference="COORDINATES: protein motif:HMM:NF015747.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-binding domain-containing protein"
                     /protein_id="HYX52886.1"
                     /translation="MKKRIGILGTGEVGITLAKGFQKHGHQVVMGTKTQGKKVAWDGE
                     VTTYEKAAQQSDTLVLAVKGDVAEDVVRAIAPYSAGKTIMDAANPIAAAPPQNGILKF
                     FTTLDDSLMERLQRLAPQANFVKAFSSVGSALMVNPQLKNGPPSMFICGNSADAKNEV
                     KEILTTFGWETEDMGGVEAARAIEPLCILWCIPGFTKNDWMHAFKVLR"
     gene            complement(3459..4343)
                     /locus_tag="VE783_05505"
     CDS             complement(3459..4343)
                     /locus_tag="VE783_05505"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52887.1"
                     /translation="MKQANEKAGTGLARAMRRTFALSVPATMVATATVAMVFAIALDG
                     CSSKTKETSSNQPSQATVAQNPTPVAMPTATPEPSPLKAETSKKKVAGRNVATIRYKS
                     DDDGISFRYPRSYKMLPDIKADDTAWADPAPMNFAQPGGAVLANVGHISDPASSFFKV
                     SVNKGLTQEQCGQFASPSPAEIGNTTPVDASDESIPAKAILRGVEFTRVENATEQTDV
                     KYFHRWIQASAGNGVGACYEFALGVEETPGNTKSVDYNGMFDRLQRIFSTVKLADEPS
                     QAVTAGVTSHPAEVTNPQ"
     gene            complement(4491..5228)
                     /locus_tag="VE783_05510"
     CDS             complement(4491..5228)
                     /locus_tag="VE783_05510"
                     /inference="COORDINATES: protein motif:HMM:NF025887.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4440 domain-containing protein"
                     /protein_id="HYX52888.1"
                     /translation="MIRICVFLLLLAAVALHASTQNNTGTHSITEQELVRRTQELFDA
                     VAPGNQEPWKKYFAEDAMYFDEMGRSMDKAALVKTIAPLPKGYSGEIKVVHAKSHIEK
                     STAILSYDLDETEVIYTQPLKARYHATDTWMYRNGTWQIVAGQVLRYYEDPALGASDS
                     EHFKDYVGKYELAPGVLRTISAENGHLYIQREDRPREELLPEADCIFFRKGVEGRILF
                     RHNSGNKVDALIDRRNNEDVIWKKIGQ"
     gene            5603..6091
                     /locus_tag="VE783_05515"
     CDS             5603..6091
                     /locus_tag="VE783_05515"
                     /inference="COORDINATES: protein motif:HMM:NF021221.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4870 domain-containing protein"
                     /protein_id="HYX52889.1"
                     /translation="MSSPKSTWPRPTSDECTMAVLAHALQIVGGWIAPLVIFLVKKDS
                     LFVRFHALQALLLQGVYLVCAIIFGFGWMIFFISAVLPHLQDKSASPPAAIFAFVPVL
                     WLFIMGYWVVILVCVIVFSIKAGRGEWAEYPLLGRLARKFLKMDVPPGTQPTPVSNSL
                     AP"
     gene            6128..6829
                     /locus_tag="VE783_05520"
     CDS             6128..6829
                     /locus_tag="VE783_05520"
                     /inference="COORDINATES: protein motif:HMM:NF020496.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdeI/OmpD-associated family protein"
                     /protein_id="HYX52890.1"
                     /translation="MPSSKSASKTFRAVLERSTDGLNWTIIRVPLDVPKLWGVRGQLR
                     VKGEINGFAFRTSLFPTGNGRHIMMVNRQMQKGGKTSFGMEARFRMEPDTEKREIVEP
                     AELTRILKQSKSLKKFYEGFNDSMRRDMAKFVGEPKSAESRKRRAEQLAERMLLTMEG
                     ERELPPMLQAAFVQSPLARKGWEKMPASHRRSHLMGIYGYKSPESRAKRLAKAVEEMM
                     QYAEKGKSPGREELD"
     gene            complement(6873..7229)
                     /locus_tag="VE783_05525"
     CDS             complement(6873..7229)
                     /locus_tag="VE783_05525"
                     /inference="COORDINATES: protein motif:HMM:NF037832.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5615 family PIN-like protein"
                     /protein_id="HYX52891.1"
                     /translation="MKILVDENIPRMTVEALRNLGHDVNDIRGTVHQGMPDSGVWQIA
                     VSEQRLLVTTDKGFTSYRHAPHYGVLVVRLRQPNRIKINHSVLLGIQRIQENEWPGLI
                     VVIRDQTLSTTRVQME"
     gene            complement(7233..7466)
                     /locus_tag="VE783_05530"
     CDS             complement(7233..7466)
                     /locus_tag="VE783_05530"
                     /inference="COORDINATES: protein motif:HMM:NF016167.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF433 domain-containing protein"
                     /protein_id="HYX52892.1"
                     /translation="MNFDRISIDPGICHGQACIKGTRIPVHQLVRMLANGDTVEDLLQ
                     EYPSLQREDVLASLEYAAQLAEEQVTPINVANS"
     gene            complement(7557..8633)
                     /locus_tag="VE783_05535"
     CDS             complement(7557..8633)
                     /locus_tag="VE783_05535"
                     /inference="COORDINATES: protein motif:HMM:NF019121.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52893.1"
                     /translation="MDKKLKIAVLYENWGWAEEEQPPAAEPEKKKRGAKKKRKKREKH
                     DFEEIYEALEKLGHEPSYQVLDGEDKTLAALMRCEADLFFNLVESYAGDDTKEMQVAG
                     YLDLLGKLYTGAGPQGLYLAQDKGIAKKLFEFHGIRTPYFATVFQGNLEHAHDIKFPL
                     IVKPVSEDGSLGIDQNAVVDSVKDLMQRIHYVQEEFDCPALIEEFIEGREIYCGILGN
                     QRPDVLPLIELDLSKLPAGMPKVAGTEVKWEKDSEAYKVTKSAPVEDLDEETTKTLQK
                     TALQAYQILKLRDYGRIDMRLTPKGEVYVIEANPNPWLSSDSEFFMAAKKSGRSYAEM
                     IGDILEAVRSDRRRRDRMRISWNM"
     gene            complement(8665..9678)
                     /locus_tag="VE783_05540"
     CDS             complement(8665..9678)
                     /locus_tag="VE783_05540"
                     /inference="COORDINATES: protein motif:HMM:NF027219.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative zinc-binding metallopeptidase"
                     /protein_id="HYX52894.1"
                     /translation="MQAFEKLAPEVQEVLGKPIRELGLKLEDSPVQPLIQKLYTELDR
                     KGLKKFRPGFYLTDEWGCPSGEPVIGIPFYLADSRLAALEKEINDLEDKRQVMMYLRH
                     EAGHAINYAYALHKTDEWKQLFGPYRKPYRDIYKPIPFSRRFVRHMEGWYAQKHPDED
                     FAETFAVWLTPGSRWRERYKDWPALDKLKYVERIARKFGKTDPVRPRGRTDITVDEME
                     TTVAEFYEMTLSEQPSPGELALGTDLEDIFKVSPRRKNGVRPAVDLLRENRKSLLDKL
                     TYWTGAQRPLIRKLLESIEKYAAERNLRALTKLEREYLTEITVYATALVMNYVARGKF
                     VHT"
     gene            10028..10735
                     /locus_tag="VE783_05545"
     CDS             10028..10735
                     /locus_tag="VE783_05545"
                     /inference="COORDINATES: protein motif:HMM:NF018894.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0035438 - cyclic-di-GMP binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PilZ domain-containing protein"
                     /protein_id="HYX52895.1"
                     /translation="MGPRKTFSALLLSQDSLPIEGIRKVFSEYGIELHKAGNSAEVDI
                     WVRRRPLDLVLCDYDAPGAQELECLLPSTRWKGINIMVLRSAAAWNAVGKRIHMTLGK
                     PLSADVLARGLKAVYTSMTRNRLLAFRHTVALKPIAGTVLHHGWQRPLGRTVIANLSH
                     TGLCLTGSEPLPQGGVVSVNFPLPESEDQLHVVGTVIWSDQSGRSGVQFKGLSPSQVK
                     QLEDRLRKRMPWAELLR"
     gene            complement(11106..>11334)
                     /locus_tag="VE783_05550"
     CDS             complement(11106..>11334)
                     /locus_tag="VE783_05550"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52896.1"
                     /translation="KMMSSMGPGGHDMHDMQAMGGGHGGHEGGMSCCANMKDGAMKDG
                     GGMSCGKGDGKEGGMSCCGGSKQNASEKPKQ"
BASE COUNT         2278 a         3190 c         3266 g         2600 t
ORIGIN      
        1 aaggaactca ccgaaatgct gggcgccctg aaacatgtct ggtcacgatg gattgagttt
       61 cccagcctgg agaaacggcc gaattaaggc gcctgagtgc agttttgcat tctcaggtgt
      121 ttcaacttct tgacgtcgaa ttaaatttat ttagactttt attcgcagta cgcaccaatg
      181 ccaagccccg ttctctacct cgaagacgta gcttctgacg cgcagctagc catggcggaa
      241 tttcgccgca tgggagtggg tgagcgcgtg atgcatatgc gcgatggcgg agaacttctt
      301 tcctatctgc agggcattga cgagcccctg ggcggcaggc gcaacccggt gcctgcgctg
      361 gtgatcctcg acctgggact gccggagatt cacggcatgc agctcctgaa catgctgcga
      421 tcgcgccgca gcctgcgtcg cattccggtg gtcatcttca gcggctcgga ggacccctcc
      481 gtgatttccg ccgcatacga tgccggcgcc tgctcctttg tatggaagag cggcgaaatc
      541 accaaattcc gcaacgcgct gcacagcatt gtggagtact ggaccaagct caaccgcgtt
      601 cccggcgaga accacagcca gccgcataat tagccctcgc ttctcgctgc gcctcaactg
      661 gtgtgccacc acgcggttcg cagcatgcca cttgagcaga attgctgtta cgcaggcgaa
      721 tgggttcgtc tgatccggct gcgaactcga gacgcattga tgccgaaacc aacgggaaca
      781 aacatcggcg cggcacaatc aaagttctaa cggcgctgag acacagatcg tgtaccattc
      841 ccggcgatgg ggagggctgc ccaatgaaac accacattat tagcggcgcg gccagcggaa
      901 tcggctatga gttggcgcgt gtgcttctgg cgcgcggcga tgcggtaatg gcctgcgacc
      961 taaagctcga acccatggcg cagctcagca gtgcgaccac ggctgccgaa aaccttcaga
     1021 tccgcaaact cgatgttcgc gatcctgctc gatgggaagc cattatgcag gaggcgggca
     1081 gcctctggcc gcggattgat acggtgatga acgtggcggg cgtgatgcgc gtgggatcaa
     1141 tcgaggagat cacgccggag gatgtggatt ttcatttcga catcaactgc aaaggcgtga
     1201 ttcacggtac ccaggcggca ttccgcgcca tgcgcaacca ggctgaccag aacggccgcg
     1261 gccacattat taatatagcg tcgctggccg gaatcagccc gattccgggc gcatcgctct
     1321 actcagcatc aaagttcgcc gttcgtggct actcgctatc cgtaatgcct gagctgaaaa
     1381 agttcgggat cgccctgacc gtggtttgtc cggacgctgt ggccacgccc atgacggcgc
     1441 cgtttcacca caaacccgaa gcggcgctga tcttcagcgg gtcgcgcctg ctgcaaatcc
     1501 ctgaggtggt gcgcgcgatt gttgaccacg gactggagaa acgaccagtg gaactcacca
     1561 tgccgaagag tcgcgccatc ctgacaaaac tggcgggagc gttgcccggc ttggccacga
     1621 agttgttcat ggagagcctg acaaagcagg ggcggaagaa gcaggcggcg ctgccttgaa
     1681 agctgaagcc tgctcgcagc agcaaacgcc ctcatttact tgtgatcctg atacttgtcg
     1741 tcctgagcgc agcataaatg attcagtcgc gtaagacgct ttgtagcaca ggcgcctcgc
     1801 ctgtgcgcac tactctccaa tgagccacgg atctttgatc ttctgcttcc gtttaggctt
     1861 cctcattcca cgtcgccagt accagggata ttcctgcgga ctccgggccc ccgtttccac
     1921 cgcgttcata gcgatgtaga gagtcttgtc ctcaaagtcc ccctccgatc tgatcaggtg
     1981 atcgaacgac tcgtcaatcc agagagaccc ctttctcttc aagagcttgt ttacgctgtg
     2041 tgaggacgct cctttgatgc ccttcatgat tgttgctaac cggaaataac ccagcccctc
     2101 cggcagcggt gtcaatatca ggtgaacatg ggtgctcatc accacaaccg actccagttc
     2161 gtaccgcttc ccatcgtcgt acacgcaatg ctcaaggacc agccacttcg cctcttcact
     2221 cagcgccaga tcgtctctgg tacgaaacgt gatgaaatag gaaccgccgt ctctttcaag
     2281 gtgcggcaat ttgcggcggt agattggcat tcttgcggca caggcgaggc gcctgtgcta
     2341 cacagttaac aaaatctgac attcaacatg caagagagaa gccagtcggg cactaatcac
     2401 ggcccgaacc gggatcagcc tgtttgaatc atttatgaga tcgaaagtaa ccaagcaaaa
     2461 gaacttctgc gaagaattgt gatccgagac tctcagacaa attaccgcaa taccttgaag
     2521 gcgtgcatcc agtcgttttt ggtgaagccg gggatgcacc acaggatgca gagcggctca
     2581 atggcgcgcg cagcctccac tccgcccatg tcttcggtct cccagccgaa ggtggtgaga
     2641 atctctttca cctcattttt cgcatcggcg ctgttgccgc agatgaacat tgagggcggg
     2701 ccattcttca gttgaggatt caccatcagc gcgcttccca cgctgctgaa ggccttcacg
     2761 aagttggcct gcggagccag gcgttgcagg cgctccatca gagagtcgtc gagagtggtg
     2821 aagaatttca gtatgccgtt ctgcggagga gcggcggcga tgggattggc ggcatccatg
     2881 atggtcttgc ctgccgagta gggcgcgatg gctcttacca cgtcttccgc gacatcgccc
     2941 ttcacggcca gcaccagcgt gtctgattgc tgcgcggctt tctcgtaggt tgtgacttcg
     3001 ccatcccagg caactttctt gccctgcgtc ttggtgccca tcaccacctg atgcccgtgc
     3061 ttctggaagc ctttggccag cgtgatgcct acttctccgg tgccgagaat gccgatgcgc
     3121 tttttcattg gagagtccct ctgcgatttt gatcgtttcg acggaagtag attcgggcga
     3181 tgggggagga gattcagaaa aattgagctt cggtttctcc cgagcgagcg agggaaccct
     3241 acccgaacgc aactcttaga agtgacaagg tgcggaattt cttgcgctcg ggaacgcggt
     3301 tctcgcgtcg atgggaactt gaccgcctgc tctggccttc gtgttccttt gtgtcctttg
     3361 tggttatagt gttccctcgc tacgctcggg ataaagcaaa gcgtcaaaac aaaaaaggcc
     3421 aggcagctca aaccgcctgg cctgatttgc aggttgattc attgcgggtt ggtgacctcc
     3481 gcgggatgcg aagtcacgcc tgcggtcacc gcctggctgg gttcgtcggc gagcttcacg
     3541 gtggagaaga ttcgctggag ccgatcaaac atgccgttgt agtccactga cttggtgttg
     3601 cccggggtct cttccacccc gagcgcgaac tcgtagcagg cgcccacgcc gttgccggcg
     3661 ctggcctgga tccagcgatg gaagtacttc acgtccgtct gctcggtagc attctccacg
     3721 cgggtgaact caacgccgcg caggattgcc ttggcaggaa tcgactcgtc gctggcatca
     3781 accggagtgg tgttgccgat ttccgccggt gagggcgagg cgaactggcc gcactgctcc
     3841 tgcgtgagtc ccttgttcac gctgacctta aagaatgaag aggccggatc gctgatgtgg
     3901 ccaacgttgg ccagcaccgc accgccgggc tgggcaaaat tcatgggagc cggatcggcc
     3961 cacgcagtgt cgtcagcttt gatatcaggc agcatcttgt agctgcgtgg atagcggaag
     4021 gagattccgt catcgtcact cttgtagcgg atggttgcga cgttccggcc cgctactttt
     4081 ttcttcgaag tttccgcctt taatggtgaa ggttccggcg ttgccgtagg cattgcaacc
     4141 ggggttgggt tctgcgcaac cgtggcctgc gacggctggt tgctgctggt ctctttggtt
     4201 ttgctggagc acccgtcgag cgcgatggcg aagaccatcg ccactgtcgc ggttgccacc
     4261 atggttgccg ggacactcag ggcaaaagtc cggcgcatcg cccgtgcgag cccggtgcct
     4321 gctttctcat tcgcctgctt catgtttctc acctccgctg cctcagcagc acccggtgaa
     4381 atggcacgag gcgggccaac atggggagtg ttgaatttgc tgggtttagt ggaatttgcc
     4441 gtaacgagcg gcgtcgctga tcacagacag tgtgtgcgcc ctgacacgat tcactgcccg
     4501 attttcttcc agatcacatc ttcattatta cggcggtcaa tcagggcatc cactttgtta
     4561 ccgctgttat ggcggaaaag gatgcggcct tccacgcctt tgcggaagaa gatgcaatcc
     4621 gcctcgggaa gcagctcttc gcgcggacgg tcttcgcgct ggatatagag atgcccattc
     4681 tcggcggaga tggttcgcag cacgccgggg gcgagctcgt atttgccgac gtagtccttg
     4741 aaatgctccg aatcgcttgc gcccagtgcc ggatcttcgt agtagcgcag cacctgcccg
     4801 gcgacgattt gccacgtgcc gttgcggtac atccatgtat ccgtggcgtg gtagcgtgcc
     4861 ttaagcggct gggtgtagat gacctctgtc tcgtcaaggt cgtaactgag aatggccgtg
     4921 ctcttctcaa tgtggctttt ggcatggacc acctttattt cgccggagta gcctttgggc
     4981 agaggcgcaa tggttttgac cagagcggcc ttgtccatgc tgcggcccat ctcgtcaaag
     5041 tacatggcgt cttcagcgaa atactttttc catggctcct gattaccggg agcgacagcg
     5101 tcaaacaact cctgtgtgcg gcggaccagc tcctgttccg tgatggagtg cgtgccagtg
     5161 ttgttctgcg tggaggcgtg aagggccacg gctgcgagca acagcaaaaa gacacagatt
     5221 cgaatcatcg atgatccttt ttgccgaaaa gcttagacga gaaaaggcgg ctcgagtgga
     5281 gtcactactt tctgaaaacg gagctgtctc gtaaatgact cgatccgata acaagctttg
     5341 tagcacaggc gccccgcctg tgccgattat tctccagtga accacgacct ttgatcttct
     5401 gcttcaggtt aggatctttc gttccaggtc gccactacta gtgctattta ttgaggcaca
     5461 ggcgaggcgc ctgtgctaca cagttaacaa aagctacatt caacacacaa aagcaagcaa
     5521 tcggctcccc cgattccgac aacagcctgg ttcactcact aggggataac ctttaaaatc
     5581 gattgcgcac aggaaagcct cgatgtcctc accaaaatcc acatggccgc ggcctacatc
     5641 tgatgagtgc accatggcgg tgctggccca tgcgttgcag attgtgggcg gatggattgc
     5701 tccgctggtc atctttctgg tgaaaaagga ctccctgttc gtccggtttc atgctctgca
     5761 ggcgctcctg ctccagggtg tgtacctggt gtgcgccatt atcttcgggt tcgggtggat
     5821 gatctttttt ataagcgccg tgctcccaca tcttcaggac aaatcagctt cgcctccagc
     5881 cgcgatcttt gccttcgttc cagtcctttg gttgttcatc atgggttact gggtcgtgat
     5941 ccttgtatgc gtgatcgtgt tttcgattaa ggccggccgc ggtgaatggg ctgaatatcc
     6001 gctgctggga cggctggcac gcaagttcct gaagatggac gtaccgccgg gcacgcagcc
     6061 cacccccgtt tcgaattctt tggctccttg atccaacggt agtgactgtt gttttaaact
     6121 gcaccgcatg ccttcttcga agtccgcgag caaaacattt cgtgccgtgc ttgagcgcag
     6181 cactgacggc ctgaactgga ccatcatccg cgtgccgctt gatgtgccga agctgtgggg
     6241 agttcgcggc cagctccggg taaaaggcga gatcaacggc tttgcgttcc gcacgtcact
     6301 gtttcccacc ggcaacggcc gccacatcat gatggtgaac aggcagatgc agaagggagg
     6361 caagacatct ttcggcatgg aagcgcgctt ccgaatggag ccggacacgg agaagcgcga
     6421 gattgttgag cctgcggaac tgacgcgcat actcaagcaa tcgaagtcgc tgaagaaatt
     6481 ctatgaaggc ttcaacgatt ccatgcgccg cgacatggca aagttcgtgg gcgagcctaa
     6541 gagcgctgaa tcacgaaaga ggcgtgccga gcaactggct gagcgcatgc tgcttaccat
     6601 ggaaggcgaa cgcgaactac ctccgatgct gcaggcggct ttcgtgcaga gtccgttggc
     6661 gcggaaaggc tgggagaaga tgccggcttc gcaccggcgg tcgcacctga tggggatcta
     6721 cggatacaag agccctgagt cccgggccaa gaggctagcc aaagcagtgg aagagatgat
     6781 gcagtatgca gagaagggaa agagtccggg cagggaagag ctggattagc gttcggtttt
     6841 gagccattgc cgaaactgag aattgaagat ggttattcca tctggactcg cgtcgtgctc
     6901 agggtttgat cgcgaatgac gacaatcaat cccggccatt cattttcctg aatgcgctgt
     6961 attccaagca gaacggaatg attgatcttg atccggttcg gttgccgcaa acgcacgacc
     7021 agaacgccgt aatggggagc atgtcggtaa ctggtgaaac ccttgtcagt ggttacaagc
     7081 agcctctgct cggaaactgc gatctgccac actccagaat ctggcattcc ctgatgcact
     7141 gtccctcgga tgtcattgac gtcgtgtccg agattacgga gtgcttccac ggtcatccgg
     7201 ggaatgttct cgtcgaccag gatcttcatc gttcaggaat ttgcaacgtt gattggcgtg
     7261 acctgctctt ctgctaactg cgcggcatat tccaggctgg caagaacgtc ctcgcgctgc
     7321 aagctgggat actcttgcaa gagatcctca accgtgtcac cgttagccag catccgcaca
     7381 agctgatgga cggggatacg cgtgcccttt atgcaagcct gtccatgaca aatgcctgga
     7441 tcgatcgaga ttcgatcgaa attcatgact gacctccctg gagttagttt agggcgaaga
     7501 gtgattcacc gcaaaataca ccgacccgaa acgcgttggc aatcctggca ttgccctcac
     7561 atgttccagc tgattctcat gcggtcacgc cttcgacggt cgctgcgcac agcttccaga
     7621 atatcgccga tcatctccgc atagctgcgg cctgatttct tggcagccat gaagaattct
     7681 gaatcgctcg acaaccaggg gttgggattg gcttcaatca cgtagacctc gcccttgggg
     7741 gtgaggcgca tatcgatgcg gccgtaatcg cgcagtttga gaatctgata ggcctgcagc
     7801 gcggttttct gcagtgtttt ggtggtctct tcgtcaaggt cttccaccgg tgctgacttg
     7861 gtgactttgt aagcctcgct gtctttctcc cacttcactt cagtgccggc gactttgggc
     7921 atgccggcgg gaagctttga aagatcaagt tcgatcagcg gcagcacgtc tggccgctga
     7981 ttgccgagaa tgccgcaata aatctcgcgg ccttcgataa attcttcaat cagtgcgggg
     8041 cagtcgaatt cttcctgcac gtaatgaatc cgctgcatca ggtctttcac gctgtcgacc
     8101 acggcgttct gatcgatgcc gagcgagcca tcttccgaga ctggctttac gatcagcggg
     8161 aacttgatat catgcgcgtg ctcaagattg ccctgaaaca ccgtggcgaa gtacggcgtg
     8221 cggatgccgt gaaattcaaa cagtttcttg gcgatgcctt tgtcctgcgc aaggtaaagt
     8281 ccctgcggac cggcgccggt gtagagcttg cccagcagat caagatagcc ggccacctgc
     8341 atttctttgg tgtcatcgcc ggcgtaagat tccacgagat tgaagaaaag gtctgcctcg
     8401 cagcgcatga gcgcggccag ggtcttgtct tcaccgtcga gcacctgata gctcggttca
     8461 tggccgagct tctccagcgc ctcgtaaatt tcctcaaagt cgtgcttctc gcgctttttg
     8521 cgcttctttt tggcgccgcg cttcttcttt tccggttcag cggcgggagg ttgttcttcc
     8581 tcggcccatc cccagttctc gtagagcacg gcaattttca gtttcttatc catcagcgta
     8641 tttaactcat tatcccagcc gcgatcaggt atgcacgaac ttgccgcggg ccacataatt
     8701 cataaccagc gctgtggcat atacggtgat ctcggtgagg tattcacgtt ccagttttgt
     8761 aagcgcgcgc aggttgcgct ccgccgcgta tttttcgatt gactcaagca gcttgcggat
     8821 gagcggacgc tgtgcgccgg tccagtaggt caatttatcc aggagcgact tgcgattttc
     8881 gcgcagcaga tcaacggccg gccggacgcc gttcttgcga cgcgggctga ctttaaagat
     8941 gtcttccaga tcagtgccca gtgcgagctc accgggtgaa ggctgctcgc tcagcgtcat
     9001 ctcataaaat tcggcgaccg tggtttccat ttcgtccacg gtaatgtccg tgcggccgcg
     9061 ggggcgcacc ggatcggttt ttccgaattt acgggcgatg cgctcgacat acttcagctt
     9121 gtcgagggcg ggccagtctt tgtagcgctc gcgccagcgc gagccgggtg taagccagac
     9181 ggcgaaggtt tcggcaaagt cttcgtccgg gtgcttctgc gcgtaccacc cctccatgtg
     9241 gcggacaaaa cggcgagaaa agggaatggg cttatagatg tcgcggtagg gcttgcggta
     9301 agggccgaag agctgcttcc attcgtctgt tttgtgcagc gcgtaggcgt aattgatggc
     9361 gtggccggcc tcatggcgca ggtacatcat gacctggcgc ttgtcttcga gatcgttaat
     9421 ttctttttcc agcgcggcga ggcggctatc ggcaagatag aagggaatgc cgatgacggg
     9481 ctcgccggag gggcatcccc attcgtcagt gaggtagaag ccggggcgga acttcttcaa
     9541 gcctttgcgg tccagttcgg tgtagagctt ctgaatgagc ggctgcacgg gagagtcctc
     9601 aagcttgagg ccaagctcgc ggatgggctt gcccaggacc tcctggactt ccggcgccag
     9661 tttttcaaaa gcctgcaatc acttctccgg tggagcggcg tttccacacc cactatttag
     9721 gatgcagaga gcggaaaccc gccgtggaaa gaatggcaaa agcgtaacat agccgctatt
     9781 ggcggaggag ttactccggg catactaccg ttgcagccgg ggtccttcgc caaacctgcg
     9841 ccgctcggcg gttcacttaa tgcggataca ggccctctaa cacgcatggc cagtgtgttt
     9901 ccctgatgga gcgtgaccgc ggtcacggtg tgtaatctcc tgcggacgga gaataatgat
     9961 gcgggaagcc actcttacac ctcacacgct gcgcagcttc cccggcccag atcagaaagg
    10021 taaatcgatg gggcccagaa agacattctc tgcgctgttg ctttcacagg attcgctgcc
    10081 gattgaaggc atccgcaaag tgttttccga atacgggatt gaactgcaca aggccggcaa
    10141 ttcggctgaa gtagacattt gggtgcgacg gcgtccgctg gacctggtgc tttgcgacta
    10201 cgacgcgccc ggcgcccagg agctggagtg cctgctgccc agcacacgct ggaaaggaat
    10261 caacataatg gtgctgcgga gcgcagccgc ctggaacgct gtaggcaagc gaatccatat
    10321 gacgctgggc aagccgctga gcgccgacgt gctggcgcgc gggctgaaag ccgtttacac
    10381 gagcatgaca cgcaaccgtc tgctcgcgtt tcgccacacg gtggcactga agcccattgc
    10441 cggaaccgtg ctgcatcacg gctggcagag gccgctggga cgcaccgtga ttgccaacct
    10501 gagccacacc ggactttgcc tgaccggcag cgaaccgctg ccgcagggag gagtggtgag
    10561 cgtgaacttt ccgctgccag agtctgaaga ccaattgcac gtggtgggca cggtgatctg
    10621 gtctgatcag agcggtcgca gcggcgtgca gttcaaagga ctttcaccca gccaggtgaa
    10681 gcaactggaa gatcgcctgc gaaagcgcat gccttgggcg gagctgctgc gctagcccag
    10741 ctttaaccac aaagtcgcaa tgaacggggc gttcccaaac gagcatgaag atggcttttg
    10801 tttgtcgctt tgctgcgctg gtccgttgtt ttgcgcgctt cactacgctc cgcgcaggcc
    10861 tacggcgtga ggaagtggtt tattaacagc ttacccagcc cttattcctc agctcgcttc
    10921 gctcgcctcg gaaacggact gggcttgcac tatttcgcgc ctgcggcgct cggctttagc
    10981 gagtgccaga ccctggtggc tcccgattgc attttcgaga gagggcacaa aggtccacga
    11041 aggaaatcac gcttcgtgcg gcctggtgcc ctctttaaac tttgaaattg ctttggtgta
    11101 agaagctatt gcttcggttt ttctgaggcg ttctgcttgc tgccgccaca gcaggacatg
    11161 ccaccttcct tgccgtcgcc tttgccgcag gacattcctc cgccatcttt cattgcgccg
    11221 tctttcatgt tggcgcagca ggacatccca ccttcgtggc cgccgtggcc gccacccatc
    11281 gcctgcatgt catgcatgtc atggccgcca gggcccatgc tgctcatcat cttc
//
LOCUS       DASQYP010000173         3570 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_281568, whole genome shotgun sequence.
ACCESSION   DASQYP010000173 DASQYP010000000
VERSION     DASQYP010000173.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 3570)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3570)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3570
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_281568"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..497)
                     /locus_tag="VE783_05555"
     CDS             complement(<1..497)
                     /locus_tag="VE783_05555"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52897.1"
                     /translation="MSRNKNHLHGITTALLCLGMVASTLGQKDPGVRKGPPGAGTPLN
                     GLSANELSMFSEGQQRAIQLEAVCDSCSELPLGSFIDPAKAKLVFQTNSAGLGTRFNG
                     DQCLGCHNQPALGGSGGFLVPNPQDPPAKQRPPENPMFDLIPHRKGATNHVPSFITQF
                     GPIREV"
     gene            875..2776
                     /locus_tag="VE783_05560"
     CDS             875..2776
                     /locus_tag="VE783_05560"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52898.1"
                     /translation="MSQGKVQSPLPLTETQQITAPAAETTSHQDTKTRKINLTDRLSN
                     RSRRLFMGKAGGLGAMAVAAAMVPLEPLVGGKETRAEASDITYSESNRANSAFQYRTK
                     EAQAEKISPPVAADNGDFALYTDHSGTWSKTLQHDNLGIVNATSFNSFVTALTNGDFA
                     DFQNILVGNPGGTNPNAQLNGPQTALAFELEGLDSHATVLDPAPTTASAQTADEQVEH
                     YWAALLRDVNFTDYASNATAIAAANELNGLTYIKGTTNNEYPFPVTPQNLFRGRIVAG
                     DGNVQGPYLSQFLLHPTTFGALPLSMMFKTFAPNQNFMTSVAEYINVENGFPPSGSLA
                     FDPTPRFLRNGRDLTAYTHVDVLHETYFLAFLLLLQLNAPLNPGNPYLNSRTEHGFGT
                     LDGADCSATLPEVATRALKAAWFHKWIVNLRQRPEDYGALVHARLTNRVPLPQAASHL
                     HADVLNSQALAQTFSKFGTYLLPQAFPEGAPTHPCYPTGHGTVAGACITVLKYFFDGT
                     KKIQPLLQAAGTDVMQPSSDGLSLVPYTGADAANLTINGELSKLAHNISFGHGIHAGI
                     HFRSSTRASILLGEQVGISILNDRTPGYNEPFTLSITKFDGTTQTFANTTPGVFNNGN
                     TPNTTCPAL"
     gene            complement(2945..3343)
                     /locus_tag="VE783_05565"
     CDS             complement(2945..3343)
                     /locus_tag="VE783_05565"
                     /inference="COORDINATES: protein motif:HMM:NF012354.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HYX52899.1"
                     /translation="MEVHQLRYFCAIVKYGTFTRAASEEHVSQPSLSQQIIKLEDELG
                     GKLFNRLPRSSRLTALGEIFLPRALTVLKEIRDCKAEAQRIVALQQAEPAPIPQGIKP
                     CPGALPAIALAPTSTVSPANSRADALSKSA"
BASE COUNT          799 a         1091 c          971 g          709 t
ORIGIN      
        1 acttcacgga tgggcccgaa ctgcgtaata aaagatggaa cgtggttggt cgcgcccttg
       61 cgatgcggga tcaggtcgaa catcgggttc tcaggcggac gctgctttgc cggaggatcc
      121 tgcggattgg ggaccagaaa cccgccagag ccccccaacg caggctggtt gtggcacccc
      181 aggcactgat cgccattgaa gcgggtgcca aggcctgctg agttcgtttg gaacaccagt
      241 ttggctttgg cgggatcaat aaatgagcct aacggaagct cgctgcagct atcgcagact
      301 gcttccagct ggattgcgcg ctgttggcct tccgaaaaca tggacagctc gttcgcgcta
      361 agtccgttga gcggcgtccc tgctccgggc ggtcctttgc gcacgccggg atctttctgc
      421 cccagggtcg aagcaaccat ccccagacac agcaaagcag tggtgattcc atgtaagtgg
      481 tttttatttc tggacatatc tctctcctca attggtcgta tcgacggctc tgaggcagta
      541 acgcggcagc tttccggtaa ttgccagaac tcaccattcg acgcgtcagg gcgagtatcc
      601 cgggccgcag agactttcct ctacaggtaa tagcgagaaa acgagtggaa acggccagag
      661 aaaatgtgtg caactactga aaatgaaatc agtgagtcct tctgatcttc attagcaggg
      721 agacgatctc tggcgcatcg ctgtgagatc agagacttaa acgcagccct ccccttatcc
      781 ataagtacta agtattggaa acctttcata atgcgtgatg aactctggcc agctctgcat
      841 taagcgcatg tgcatagccc cacggaggaa cttcatgagt caaggaaagg tgcagtcccc
      901 tttacctctc actgaaacac agcagataac cgctcccgcc gctgaaacca ccagccatca
      961 agacaccaag actcgcaaaa tcaatctcac tgaccgcctg tccaatcgca gccgtcgctt
     1021 attcatgggc aaggcgggag gcctgggcgc catggccgtt gccgccgcca tggttccgct
     1081 ggaaccgctg gtcggaggaa aagagaccag ggcagaagcc tctgacataa cgtattccga
     1141 gagcaatcgc gccaacagtg cattccagta ccgtacaaag gaagcgcagg cggagaagat
     1201 cagcccgccg gtggccgcgg acaacggcga ctttgcgctc tacaccgacc acagcggcac
     1261 ctggagcaag accctgcagc atgacaatct ggggatcgtg aacgccacgt cgttcaacag
     1321 ctttgtgact gcgcttacca acggagactt cgctgatttc cagaacatcc ttgtcggtaa
     1381 tcccggtgga accaatccga acgcgcagct gaacggcccg caaaccgcgc tggcgttcga
     1441 actggaaggt ctggattcgc acgccaccgt gctcgacccg gcgcccacca cggccagcgc
     1501 gcagacagcc gatgaacagg tagagcacta ctgggcggcc ctgctgcgcg acgtaaactt
     1561 tactgactat gccagcaatg caaccgcgat tgcggccgcc aatgagttga acggcctcac
     1621 ctacatcaag ggcaccacca ataatgagta tccgttcccg gtaacgcccc agaacctgtt
     1681 ccggggacgc atcgtcgccg gagacggcaa tgttcagggg ccgtatctct cacagttcct
     1741 gctgcacccc accacctttg gcgcgcttcc gctgagcatg atgttcaaga cttttgcccc
     1801 gaaccagaac ttcatgacca gcgtggcgga gtatatcaat gtggagaatg gtttcccgcc
     1861 cagcggttcg ctggcgtttg atcccacgcc acgcttcctc cgcaatggcc gggacctcac
     1921 cgcttatacc cacgttgacg tgctccacga aacctacttc ctcgccttcc tgctgctgct
     1981 gcaactgaat gcgccgctga accccggcaa tccttacctc aactcaagga cggagcacgg
     2041 ctttggcacg ctggacggcg cagactgctc cgcgaccctg cccgaagtgg caacgcgcgc
     2101 gctgaaggca gcgtggttcc acaagtggat cgtcaacctg cggcagcgtc cggaagatta
     2161 cggcgctctg gttcatgcca ggctcacgaa tcgcgtcccc ttgccccagg cggcttcaca
     2221 tctgcatgct gacgtgttga actcgcaggc cctggcccag accttctcca agtttggcac
     2281 ctacctgttg ccgcaggcct tcccggaggg agcacccact cacccgtgct atcccaccgg
     2341 acacggaacc gtggcgggag catgtatcac ggtgctgaaa tatttctttg atggcaccaa
     2401 gaagatccag ccgctgctgc aggcggccgg gaccgatgtg atgcagccca gttcagacgg
     2461 tctctctctg gtgccttaca ccggcgcaga cgccgccaac ctcaccatca acggtgagct
     2521 atccaagctg gcccataaca tttcctttgg ccacggaatc catgcgggca tccacttccg
     2581 cagctccacg cgggcttcca tcctgctggg cgagcaggtg ggaatcagca ttctcaatga
     2641 ccgaacgccg ggctataacg agccgttcac gctcagcatt accaagtttg acggcacaac
     2701 ccagaccttt gccaacacaa cccccggcgt cttcaacaac ggaaatacac ccaacacaac
     2761 ctgcccggct ctttaagctt gagcacggca gtcagaaaaa caagcgggtc ctggccaata
     2821 accattggcc gggacccgca gtttttaccg atttctgacg gccagcgcag cgctcttggc
     2881 acagttccgg gcaggaggcg ctgcgaacaa tcacgggcaa agagtgaacc ggagtaagca
     2941 gtccttaagc gctttttgaa agggcatcag cccggctgtt ggcgggtgaa acagtactgg
     3001 ttggggcaag agcgatcgcc ggaagtgcgc ccgggcatgg ttttattccc tgcggaatcg
     3061 gggcgggttc tgcctgctgc agcgccacaa tcctctgcgc ttcggctttg cagtcgcgga
     3121 tctccttgag aacggtaagc gcccgcggca ggaaaatctc tcccaacgca gtgagccggg
     3181 agcttctggg caggcgatta aacagctttc ctccaagctc atcttccagc tttatgatct
     3241 gctgcgacaa cgatggctgg gaaacatgtt cctcactggc agcacgtgtg aatgttccat
     3301 atttcacgat ggcgcaaaaa tacctcaact gatgtacttc catacgggtc ccctttgtaa
     3361 cgtcacgctg gcccccaaaa agcagcagag ctcgggagat tctaatcgtg agttgctgct
     3421 tttggtcgca cagcgataca cgatttcagc ggtccagttc caaaatggaa ctgggcgaac
     3481 tgaacgcatc ggggattcac cggaggagca agccggattc gccgtaatcg ccctttaacg
     3541 cgtatcggtg acgacaaacg cggattgcgg
//
LOCUS       DASQYP010000174        12791 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_112565, whole genome shotgun sequence.
ACCESSION   DASQYP010000174 DASQYP010000000
VERSION     DASQYP010000174.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 12791)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12791)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12791
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_112565"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            310..2472
                     /locus_tag="VE783_05570"
     CDS             310..2472
                     /locus_tag="VE783_05570"
                     /inference="COORDINATES: protein motif:HMM:NF037015.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ig-like domain-containing protein"
                     /protein_id="HYX52900.1"
                     /translation="MSQVRKLCFLLAVAVLAAPSLLLSQCGVERWSVKTGTDPDAGKV
                     NLNSSTNTTIASLRAAPAPSPIPSNNRVSPTETTVWVINATLTQYKLENDSDYHLVFA
                     DSSGLTMIMEIPSPTCVGSTSPFLSAIQNARAKFDAQFTATTSFQTANIPVQIVGVGM
                     FDFLHGQTGVAPNGIELHPVLDIIFNPGTQTPDFILSTTPSTLSVAQGSSGTTRISTT
                     VAGGFNSAISLSTSGLPSGVTASLSPTSIAAPGNGSSTLTLTAASTAPTGTFNVTATA
                     TGGGITHTATVALSISTAGGTGGTTTQLLGNPGFENGSTNPAPWTASSGVINNSASEP
                     PHGGTWDAWLDGYGTTHTDTLTQQVSIPSTATSASLSFWLHIDTAETSTTTAFDTLAV
                     QVRNSSGTVLSTLKTFSNLNKNTGFTQQSFDLTSFKGQTIQINFVGTEDASAQTSFVL
                     DDFSLNVTTPSTTDTTPPTVSVTSPTNGATVSGTVTVNASASDNVGVTQMQLLIDGTL
                     VASNTNATALSFSWSTPSVTNGSHSIVAKAFDAAGNVGTSSTITVTVSNGAPTTSELI
                     VNGGFENGSTNPAPWTVTSGVVSNSTSEAAHSGTWKAWLDGYGTAHTDTAMQQVTIPA
                     GATAATLSFWLHVDTAETSTTTAFDKLTLQVRDSSGKVLSTLATFSNLNHATGYQQHS
                     FDLTSFRGQIIQIFFSGVEDSSLQTSFVLDDISLQVTQ"
     gene            2483..3160
                     /locus_tag="VE783_05575"
     CDS             2483..3160
                     /locus_tag="VE783_05575"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52901.1"
                     /translation="MNKLMQVILLTMFLAQFMAAQAPVSIDRPAEPNMLFDDDGGKVQ
                     IVPADLAPAQKTFHGGAVMTSVQQVSIFLGSGWSDAQVRSRQRGLSDVTASGSADLTE
                     IRSRKISTMPAAPQVDDFSNLSNTPLNDLDIQRRLDQMLKSKAIPAPNASTVYVVFLA
                     PGTMLTLGGTKAGVDFAAYHNVVHLDAGEVRYAVVPFHADAQKHAAAAARAFAETALN
                     PTGQGWY"
     gene            complement(3189..4100)
                     /locus_tag="VE783_05580"
     CDS             complement(3189..4100)
                     /locus_tag="VE783_05580"
                     /inference="COORDINATES: protein motif:HMM:NF019843.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HYX52902.1"
                     /translation="MKALRLCLWTIIAFATVSGAIAEQKNACPRNDAEFASVQQRAQA
                     KDATAQTTLASCYDLGMHVSPDGKESIRLLGEAANQGYAPAEYELGRIYLYGRGIPAD
                     YAKALTWVQKAADQGNPRAQRDLAFMYERGLGVTADPARAAEWNRKAAAQGNSEAQLQ
                     LARALDQGSGVDKNPAEARRWYAKATGAEQPAAQLALARKSLAQGNCTGAIHWFEEAA
                     EHGEAEAMFGLGELYRGGKCPRNSERALLWFTLGGRFGMQESKDEAAKLAGTLALSTN
                     NRVNSRAEEWIKAHLGAQKEEEEEEER"
     gene            4286..4933
                     /locus_tag="VE783_05585"
     CDS             4286..4933
                     /locus_tag="VE783_05585"
                     /inference="COORDINATES: protein motif:HMM:NF013923.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(2Fe-2S)-binding protein"
                     /protein_id="HYX52903.1"
                     /translation="MDDLPDKKNSKKPKKASAGGQGVSRRDFLKISGVTAAVPLVSQA
                     SALAFADEARELGPGKVPVSLSVNGKKLNAQLEPRVTLLDALRDRFELTGAKRVCDRG
                     TCGACTVLMDGKAVYSCSVLAIDAQGREITTVEGLSTPEKLHPIQQAFVDNDAQQCGF
                     CTPGFVMATKAMLDQHPNPTPEQVKQLLGGNFCRCGTYAGMRAAVAQAAKNTKGA"
     gene            4936..7305
                     /locus_tag="VE783_05590"
     CDS             4936..7305
                     /locus_tag="VE783_05590"
                     /inference="COORDINATES: protein motif:HMM:NF042649.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043546 - molybdopterin cofactor binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase family protein
                     molybdopterin-binding subunit"
                     /protein_id="HYX52904.1"
                     /translation="MADESKYSWPAADQRTLIGKRISRVDGPVKVSGRAKYTYDVHRP
                     GMLYGKVVRCPHAHAKVVSVDTTAAEKMPGVAAVHVIQGPGTEIQWAGDDIVVVAAVD
                     EPTAADAAKKIVVKYDVLPHFVDDFSEPKGVAESRGPLTQRDLFQMFNNDAPDEQIIS
                     EVQKRGIAFKVTPEMEKRMRDNEVQDSVIKALVAAPVKQAEPVDSPYKKESEQVKGDP
                     DTAFKEADAVSEGVYGCVVITHCCLESHGSIAEWTDENHLFSHISTQNVSGLAGQYAQ
                     ALKIPEANVHVHQDHVGGGFGSKFGIDRWGAYTAQVSKKAGGKPVRVMLERAPELEVA
                     GCRPSAYARVKVAVKKDGTITAWQSESWGTGGPGGGGAPPMPYVLSGIPNQRRQHTAV
                     ATNIGPARAWRAPNHPQGCLITMSALEDAAAKLGMDPLDLMLKNLNLATARAEIYHDE
                     LLIAADLIGWKKNWQPRGKQSGATRRGLGLAIHTWGGRGHESNCELTISPTGAVGIKM
                     GTQDLGVGTRTAILIVAGDTLGLPINAIELQIGDNQYPASGGSGGSTTIGGVSSSTRR
                     AAVDARDQLFAKVARALNAKPEELEAVEGSIRVKGAPSRSMSWKDACARLGTQPIQVV
                     GKNPGPGDLISSGVGGVVMADVTVDTETGIVKMNKTVCVQDCGLVISMKTAESQVYGA
                     LIMGITSALYEEKIMDRNTGHMLNPNMDFYRLAGIGDVGELVVHMMTGKGYDERGPIG
                     LGEPPTVGPMAAISNAVANALGVRVPFVPMTPDRVLAALNPKGGSNAGV"
     gene            7292..8278
                     /locus_tag="VE783_05595"
     CDS             7292..8278
                     /locus_tag="VE783_05595"
                     /inference="COORDINATES: protein motif:HMM:NF013134.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD binding domain-containing protein"
                     /protein_id="HYX52905.1"
                     /translation="MQAFSYVSPTKKEDVPALLGKSWGEVEILAGGSDLLSLMKDDIT
                     TPKKLVNIKQVAGIHAISNENGGIAIGALVTLDQLSNAGDIKQRFPVLAMAAGEAASP
                     QIRNVATIGGNLCQRPRCWYFRTGHGLLAQKDGKSLVLQGDNRYHAILGNDGPAYFVS
                     PSTVAPVLIAYGAVVRIQGARGTREVPTEKFFVIPQNEGEREHNLRPDEFVTSVWLPK
                     QAGEIRAGHYEVRQKEAFDWPYATAAVALTMNGSTVQKARVVMGHVAPIPWLSLEAEQ
                     ALLGKAVTQATADAAAEAAVSKAKSLGNNTEKIHLARVAVKRAILAAAGEKA"
     gene            8275..8505
                     /locus_tag="VE783_05600"
     CDS             8275..8505
                     /locus_tag="VE783_05600"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52906.1"
                     /translation="MSNISDRFNTDRPGLCSALHWKSQYVWSDPDPTVPRGGDGLFWC
                     AMTQTCIGPDGKLAEPGNCCSGNRSCHCGASK"
     gene            8555..9235
                     /locus_tag="VE783_05605"
     CDS             8555..9235
                     /locus_tag="VE783_05605"
                     /inference="COORDINATES: protein motif:HMM:NF018712.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1326 domain-containing protein"
                     /protein_id="HYX52907.1"
                     /translation="MRKTPLFLLFVFLAASVTAFAAQNPTPAQIHGEYIETRSADVYT
                     GQCFANGEMNTAGDEAILAWSIKEGKWDGVSLAGLKVGAAVKAQATLGDPYGRPYPAK
                     SVIFVDQNATLQQRQALINFAQQMGGELLRHVVKVVDTRIDMEVLAQHSGRARLQAGD
                     FVTVETRGIGEKDHLCGNENTFYPPLTDTTHAMPAVAMTDQYRGKELNDSWELHDKRS
                     AFVGTFSR"
     gene            complement(9299..9694)
                     /locus_tag="VE783_05610"
     CDS             complement(9299..9694)
                     /locus_tag="VE783_05610"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52908.1"
                     /translation="MTFFKDIKSVVREDRNTSLSSINKDNPLFVFVIMPGDIDVEDRW
                     NNFQDPLDEALTKADLGCVTGGGSADGGEDDLAEPFSGVDVDLYDAAKGIEFLRQELV
                     RLKAPPGTIMTYELEGREWEDPVYPPKPS"
     gene            complement(9722..10792)
                     /locus_tag="VE783_05615"
     CDS             complement(9722..10792)
                     /locus_tag="VE783_05615"
                     /inference="COORDINATES: protein motif:HMM:NF005071.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HYX52909.1"
                     /translation="MNRCQLLLAVVFLAGAAFAADCPEPKPGDYVVKDFQFKSGEKLP
                     EVKLHYYTLGAPQKDASGRVRNAVLILHGTGGTGRQFMAPQFCGVLFGPGQLLDVTKY
                     FVILPDNVGHGGSSKPSDGLHMRFPHYEYDDMIELQYRLLTQGLGVNHLRLVMGTSMG
                     GMHSWLWAEQHPDFIDAAMPLASQPIEIAGRNRMTRRMIMDDIRNSPDWNNGEYTQQP
                     HGLAAALQILLIMGSSGLQMQKNFPTREKADDFLEKFIADRVKTTDANDMIYYFDASR
                     NYNPEPQLEKITAPLTAVNSADDFINPPELGIVDKDIKRVKNGKFVLLPITDQTRGHG
                     THTWPAIWGGYLEELLKRSESH"
     gene            complement(10851..11375)
                     /locus_tag="VE783_05620"
     CDS             complement(10851..11375)
                     /locus_tag="VE783_05620"
                     /inference="COORDINATES: protein motif:HMM:NF025054.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HYX52910.1"
                     /translation="MKRAIIDGSAAVPANDTARTYNAKMLVPVFRLVTESELPALLEL
                     MPEFYRDQQMHFELETAAARVKQMLTNRELGRAMLIYVGDRLAGYVVLTFCFSFEYGR
                     FGLLDELYILPPFQRQGIGREVIARIEAICREQEMAALRLEVGYENPEAQVLYIRAGF
                     RPDPRHIMTKWVKA"
     gene            11397..>12791
                     /locus_tag="VE783_05625"
     CDS             11397..>12791
                     /locus_tag="VE783_05625"
                     /inference="COORDINATES: protein motif:HMM:NF013584.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidase"
                     /protein_id="HYX52911.1"
                     /translation="MLDRRAFLAVCSRFGVAATLLPGVLWAQAQEKGKITREMIDNAA
                     AIADVKIPDEYKDMMLESLNDAEKNYEQIFALHMKNDVPPAVIFDPVLPGMKFETARR
                     PPKISAAPAAAGGVPKNLEDVAFYSVRQLAELVRTKKVSSSALTDMYLERLKRYDPTL
                     HFVITLTEDRARAQAKEADREIAAGKYRGPLHGLPWGAKDLLAVKGYRTTWGAGGFED
                     QKFDEDATVVKRLDEAGAVLVAKLTLGALALGDKWFGGMTRNPWFPKQGSSGSSAGSA
                     SATAAGCVAFAIGSETLGSVSSPSTRCGVTGLRPTFGFVPRTGAMALSWTMDKLGPLC
                     RAVEDCALVLSAIYGPDDHDRTVKNAAFNWDATLDWRKLRVGYLQKDFEIQPPQQQQA
                     PKEEKELTDAEKKKREQETADRAAARARREYDHKFDEAAIAKLRSMGVNLIPVELPKL
                     PYGAMLSMLESEAAA"
BASE COUNT         2729 a         3727 c         3819 g         2516 t
ORIGIN      
        1 tgcagggcga cagcgaatgt gtggtttcgg tgcaggtgga ttctgccacg gtgcagactc
       61 agccaaacac cttccagaag agcatcgccc ataacgcttg aggcaggaag tttgaccctt
      121 ccaaaggccg gatcatcatc cggccttttg tctttgcgcc tggaccttag ggggcctgcg
      181 gggagttcca ttttggaact gctcgcgaac tttcaccaag atttcattcc acttttccgg
      241 gccgataact tacctttact cacgtgagta gttgctttgt gtataacccg agcaggccgg
      301 agaatacgaa tgtcgcaggt acgcaagctg tgtttcctcc tggcagttgc tgtgctggct
      361 gctccttcgc tactgctgtc gcagtgcggc gtggagcgct ggtccgtgaa aacaggtact
      421 gatcccgacg cgggtaaagt caacctgaac tcttccacca atacgaccat tgcatcgttg
      481 cgcgccgctc cggcgccgag cccgatccct tccaacaatc gcgtgtcccc aaccgagacg
      541 acggtttggg tgatcaatgc gactttgacg cagtacaagc tggaaaacga ttcggactat
      601 catctggtat ttgcggattc cagtgggctg accatgatca tggagattcc gtcgcccact
      661 tgcgtcggct cgaccagccc attcctttcg gccatccaga acgcgcgcgc gaaatttgac
      721 gcacagttca cagcgaccac cagtttccag acggccaaca ttccagtgca gattgtgggt
      781 gtgggaatgt tcgacttcct tcatgggcag acgggggttg cgccgaacgg gatcgaactg
      841 catccggtgc tggacatcat attcaatccg ggaacgcaga cgccggattt catcctgagc
      901 accacgccga gcaccttgtc agtggcgcag gggagttcgg ggacgacaag gatttccacg
      961 acggtagccg gcgggttcaa ctcagcgatt tccttgagca cgtctggcct gccctccggc
     1021 gttacggcca gcttgagccc gacttcaatc gccgcgccag gcaatggaag ttccacgctg
     1081 actcttacgg cggcaagtac ggcgccaact ggaacattca atgttacagc cacggccacg
     1141 ggaggtggca tcacgcacac ggccacggtc gcactctcaa tttcgacggc cggcgggacc
     1201 ggaggcacta ccacgcagtt gctgggtaat ccaggcttcg agaatggcag tacgaatccc
     1261 gctccgtgga cggccagctc aggcgtgatc aacaactcgg ccagtgagcc tccgcatggc
     1321 ggcacatggg acgcctggct ggatggttac ggcaccacgc ataccgacac gctgacgcag
     1381 caggtgagca ttccttccac ggccaccagt gcttcactga gtttttggct gcacatcgat
     1441 accgctgaga catccactac gacggccttc gacacgcttg ctgtgcaggt ccggaactcg
     1501 tccggcacgg tgctctcgac gctgaagact ttttcgaacc tcaacaagaa caccggcttt
     1561 actcaacaga gctttgacct aacctcgttc aaaggccaga cgatccagat caactttgtg
     1621 ggcacggaag atgccagcgc gcagacttca tttgtgctgg atgatttttc cctgaatgtg
     1681 accacgcctt caacgacgga taccacgccg ccgacggttt cggtcacatc gcccaccaac
     1741 ggcgccacgg tctccggaac ggtaacggta aatgcctcgg catcggacaa tgtgggcgtt
     1801 acgcagatgc agttgctgat cgatggcacg ctggtagcgt caaacactaa tgccacggcg
     1861 ctttcattca gctggtcaac accttctgtt accaacggtt cgcatagcat tgtcgcgaag
     1921 gcgtttgatg cagccggaaa cgtgggaacg tcatccacga tcaccgtaac cgtctcgaac
     1981 ggtgcgccaa ccacgagcga actgatagta aatggcggat ttgagaacgg cagcacgaat
     2041 cctgcaccct ggaccgtgac ttccggcgta gtcagtaact cgaccagtga agctgcgcat
     2101 tccggcacct ggaaagcatg gctggacggt tacggcaccg ctcataccga tacggccatg
     2161 cagcaggtga cgattccggc aggcgcaacg gcagccaccc taagcttctg gctgcacgtt
     2221 gataccgcgg agaccagcac caccaccgcg ttcgacaagc tcacgctgca ggtgcgcgac
     2281 tcgagcggca aggtgctttc aacgctggcc acgttctcaa acctgaacca tgcgaccggt
     2341 tatcagcagc acagcttcga cctgacttca ttccggggac agatcattca gatcttcttc
     2401 tcgggcgtgg aggattcgtc gctgcagacc tcattcgtgc tggacgatat ttcactccag
     2461 gtgactcaat agggagatgc tgatgaacaa gctaatgcag gttattttgc tcacgatgtt
     2521 tctggcgcag ttcatggccg ctcaggctcc cgtttccatt gatcgccctg cggagccaaa
     2581 catgttgttc gatgacgacg gcggaaaggt gcagatagtc cccgctgatc tggcgccagc
     2641 gcaaaagacg tttcacggcg gagccgtgat gacgtccgtc cagcaggtga gcattttcct
     2701 gggcagcggc tggagcgatg cacaggtcag gagccggcag cgcggtttga gtgatgtgac
     2761 tgccagcggc agtgccgatc tgactgaaat tcgcagccgc aagatcagca caatgccggc
     2821 agcgccgcag gtggatgact tcagcaatct gagcaacact ccgttgaatg atctcgacat
     2881 tcagcgacgg cttgaccaga tgctgaagag caaagccatt cccgcgccga acgccagcac
     2941 cgtttatgtg gtgtttcttg cgccagggac gatgcttacc ctgggcggga cgaaagctgg
     3001 agtggatttc gccgcgtacc acaacgttgt gcatctggat gcgggggagg tgcgctacgc
     3061 ggtggtgccg ttccatgccg acgcgcagaa gcacgcagcg gcggcagcgc gggctttcgc
     3121 tgaaacggcg ctgaatccga cagggcaggg ctggtactag tccaacaaca acttacgaga
     3181 ggggggactc agcgttcctc ctcttcttct tcttctttct gagctccgag atgtgctttg
     3241 atccactctt ctgcccggga attaacgcga ttgttggtcg aaagtgccaa agtgccggcg
     3301 agtttcgcgg cttcgtcttt gctctcctgc atcccgaagc ggccgcccag ggtgaaccag
     3361 agcagagccc gttcagagtt acgagggcat ttgccacctc tatatagctc accgagcccg
     3421 aacatggctt cggcttcgcc gtgctcggca gcttcctcga accaatggat cgctcctgtg
     3481 cagtttccct gtgcaagcga tttccgggcg agcgcaagct gcgcagcagg ttgttcagcg
     3541 ccggtagcct tggcgtacca gcggcgcgcc tcggctggat tcttgtccac acctgagccc
     3601 tggtcgagag ctcgggcgag ttgaagctgt gcttcagagt tgccttgggc cgcggccttg
     3661 cggttccatt cggctgcgcg cgccggatcc gcggtaacgc cgagtccacg ttcatacatg
     3721 aaggccaggt ctcgctgtgc gcgcgggttg ccctgatcag ccgccttttg cacccaggtg
     3781 agagccttgg cgtaatcggc aggtatgccg cgtccgtaca gatagatcct gccgagttcg
     3841 tattcggctg gtgcatagcc ctgattcgcg gcttcgccca gcaggcgtat ggactctttg
     3901 ccatcaggcg acacgtgcat gccgaggtcg taacaggagg cgagggtggt ctgcgcagta
     3961 gcgtctttgg cttgagcacg ctgttgaacg gacgcgaact ctgcgtcatt gcgcgggcag
     4021 gcattctttt gctctgcaat ggctcccgag acagttgcga atgcgatgat ggtccataga
     4081 caaaggcgaa gcgctttcat ccgagctcct tgcgatttgt ggcgaacagt atagtgcgag
     4141 accacaaagt tctgttctgg gcgatgctga tttcaagctc gcttaacatt tcaaaaccgg
     4201 aacatagtgt gccgaacaag acagccgcaa cttccgagag ttacaatttc tccgtttcgt
     4261 tgaagagcat gccatggagg cccgcgtgga cgacctacca gacaagaaaa attccaaaaa
     4321 gccaaagaaa gcctcagccg gcggccaggg agtgtcacgg cgcgacttcc tgaagatttc
     4381 cggtgttacg gcagcggtcc cgctggtgag ccaagccagc gcgctggctt ttgccgacga
     4441 agctcgcgag ctgggcccgg gcaaggtgcc agtctcgcta agcgtaaacg gcaagaagct
     4501 gaacgcgcag cttgaacctc gcgtgacgct gctggatgcg ctgcgagaca ggtttgaact
     4561 cacaggcgcc aagcgcgttt gcgatcgcgg aacgtgtgga gcgtgcaccg tgctgatgga
     4621 tggcaaggcg gtatattcct gctctgtgct agcgatcgat gcgcagggac gcgagatcac
     4681 caccgtagaa gggctgagca cgccggaaaa actgcatccg attcagcaag cctttgtgga
     4741 taacgatgcc cagcagtgcg gcttctgcac gccgggtttt gtaatggcca ccaaggccat
     4801 gctcgatcag catcccaatc caacgccgga acaggtaaag cagttattgg gcggtaattt
     4861 ctgccgttgc ggtacctatg ccggcatgcg ggccgcagtg gcgcaggcgg caaaaaacac
     4921 gaagggagcg taaccatggc tgacgagagc aaatacagct ggcctgccgc cgaccaacgg
     4981 acacttatcg gcaaacgcat ttcccgcgta gacggcccgg tgaaagtttc aggcagggcg
     5041 aagtacacgt atgacgttca tcgcccgggg atgctctatg gcaaggtggt gcgctgcccg
     5101 catgcgcatg caaaggtcgt gagcgtggat accaccgcgg cggagaagat gccgggcgtg
     5161 gctgcagtcc acgtgatcca ggggccaggc acagagatcc agtgggcggg agatgacatt
     5221 gtggtggtgg ccgcagtgga cgaacccaca gcggcggacg cggcaaaaaa gattgtggtg
     5281 aagtatgacg tgctgccgca ttttgtggat gacttcagcg agccgaaagg cgtggcagag
     5341 agcagggggc cgctcacgca gcgcgacctg ttccagatgt tcaacaacga tgctccggac
     5401 gagcagatca tctcggaggt acaaaagcgc ggcattgcct ttaaagtaac gccggagatg
     5461 gagaaacgga tgcgggacaa cgaggtgcag gacagcgtga tcaaggcgct ggttgctgcg
     5521 cccgtaaaac aggcagagcc cgttgattcg ccttacaaaa aggagtccga gcaggtcaag
     5581 ggcgatccag atacggcctt caaagaagcc gatgcagttt ctgaaggagt gtatggctgc
     5641 gttgtaatca cccactgctg ccttgagtcg catggctcaa tcgccgagtg gacagacgaa
     5701 aaccacctgt tctcccatat ctccacgcag aacgtttccg gcctggcggg acagtatgcg
     5761 caggccttga agatcccgga agcgaacgtg cacgttcacc aggaccacgt gggtggagga
     5821 ttcggcagca agttcggcat tgaccgttgg ggagcctata cagcccaggt gtcaaagaaa
     5881 gccggtggca agccggtgag ggtgatgctg gagcgcgcac cggaacttga ggtggcaggc
     5941 tgccgtcctt cagcctacgc gcgagtgaaa gtcgccgtaa aaaaagatgg caccatcacc
     6001 gcgtggcaat cagagtcatg gggcacgggc ggtcccggag gcggcggagc tccgccgatg
     6061 ccgtacgtgt tgagcggtat acccaatcag cgcaggcagc atacggccgt ggctaccaat
     6121 atcggtccgg cacgcgcctg gcgggctccc aatcatccgc agggctgcct gattacgatg
     6181 tctgcccttg aagatgcagc agcgaaactg ggtatggatc cgctcgatct gatgctgaag
     6241 aacctgaacc tggctacggc gcgcgcggaa atctaccatg acgaactgct gatagccgct
     6301 gacctgattg gctggaagaa aaactggcag ccccgtggaa agcagagcgg cgcaactcga
     6361 cgtgggttgg gattggccat tcatacttgg ggcggtcgcg ggcacgaaag caattgcgaa
     6421 ctcaccatca gtcccaccgg cgcggtgggc atcaagatgg gcacgcagga cctgggagtg
     6481 ggaacgcgca cggctatatt gatcgtcgcg ggtgacacgc tggggctgcc gatcaatgct
     6541 attgagctgc agattggtga caaccagtat cctgcgtctg gcggttcggg cggcagcacg
     6601 acgattggcg gtgtcagctc gtctacgcga cgcgcggcgg tggatgcgcg ggaccagctc
     6661 ttcgccaaag tggcacgggc gctgaacgcg aagccggaag aactggaagc tgtagaaggt
     6721 tcgattcgcg tgaaaggcgc gccttcacgc agcatgagct ggaaagacgc atgtgcgcgg
     6781 ctgggaacgc aaccgatcca ggtggtagga aagaatcccg ggcccggcga cctgatctca
     6841 tccggcgttg gcggtgtagt gatggccgat gtcactgtgg acacggaaac cggcatcgtg
     6901 aagatgaaca aaaccgtctg tgtgcaggat tgtggattgg tcatcagcat gaaaaccgcg
     6961 gaaagccagg tgtacggcgc gctgatcatg ggaataacct ctgcgcttta cgaagagaag
     7021 atcatggacc gcaacacggg ccacatgctg aatccgaaca tggatttcta ccggcttgcg
     7081 ggaatcggcg atgtgggtga actggtggtt cacatgatga ccggcaaggg ctatgacgag
     7141 cgcggaccaa ttggcctcgg cgagccgccc actgtgggac ccatggcggc gatatccaac
     7201 gccgtggcca acgccctggg agtgcgtgtg ccctttgtgc ccatgacgcc tgatcgcgtt
     7261 ctggcggcgc tgaaccccaa aggaggcagc aatgcaggcg tttagttacg tttctcccac
     7321 caaaaaggaa gatgtgccgg cgctgctggg aaagagctgg ggcgaagtag aaatcctggc
     7381 gggcggcagc gatctgctct ccctgatgaa agatgacatc accacgccga agaagctggt
     7441 gaatatcaag caggttgcgg ggattcatgc cattagcaat gagaacggcg gcatcgcgat
     7501 tggcgctctg gtaacgctcg accagctcag caacgccggt gacataaagc aacgctttcc
     7561 cgtgctggcg atggcggccg gtgaagcagc cagtccgcag atcaggaatg tggcgaccat
     7621 cggtggcaat ctttgccagc ggccacgttg ctggtatttc cgtacaggtc acgggttgct
     7681 tgcgcagaag gacggcaagt ctctcgtcct gcaaggcgac aatcgttatc acgcgatcct
     7741 tggcaacgat gggcccgctt atttcgtgag tccatctacg gtggcgccgg tgctgattgc
     7801 atacggagcc gtggtgcgca tccagggagc gcgcggcacg cgtgaggttc ccacggagaa
     7861 attcttcgtg atcccgcaga acgaaggcga gcgcgagcac aatctgcgtc cggacgagtt
     7921 tgtgaccagc gtgtggctgc cgaagcaggc aggtgagatt cgcgccggcc attatgaagt
     7981 ccggcagaag gaagcctttg attggccgta tgccaccgcg gctgtcgcac taaccatgaa
     8041 tggcagcacc gtacagaaag ctcgtgtggt gatgggacat gtagcgccca ttccatggct
     8101 ctcactcgaa gcagagcagg cgctgctggg caaggccgta acgcaggcca ccgctgacgc
     8161 cgcggccgag gcggcagtaa gcaaggcaaa gagcctgggc aacaacacgg agaagattca
     8221 cctggcgcgc gtggcggtga aacgggccat actggccgca gcaggagaga aagcatgagc
     8281 aacatttctg atcgtttcaa tacagaccgc cctggcttgt gctcagccct gcactggaag
     8341 agccaatacg tgtggtctga tcctgatccc acggttccgc gtggcggcga tggcctgttc
     8401 tggtgtgcga tgacgcagac ctgcattggc ccggatggca agctggccga accgggcaac
     8461 tgctgctctg gcaaccgaag ctgccattgc ggagcgagta agtagcacgt aagctccttg
     8521 cctacaggag taaaatactc aggaggagtc tgccatgcgt aaaaccccac tcttcctgct
     8581 attcgtgttt cttgctgctt ctgtgaccgc tttcgcggcc cagaatccca ctcccgccca
     8641 gatccacggt gagtacattg agacccgcag cgccgacgtt tacaccggcc agtgtttcgc
     8701 caacggcgaa atgaacactg ccggcgatga ggccatcctt gcgtggagca tcaaggaagg
     8761 gaagtgggac ggcgtttcac tcgcgggctt gaaagtggga gcagcggtga aggcgcaggc
     8821 cacgcttggc gatccctacg gccggccgta tccggcgaaa tcagtgatct ttgtggacca
     8881 gaacgccacg ctccagcagc gccaggcgct gatcaacttt gcccagcaga tgggcggcga
     8941 acttctgcgc cacgtggtga aagttgtcga tacgcgcatt gatatggaag tgctggcgca
     9001 gcacagcggc cgcgcgcggc tccaggcggg cgacttcgtg accgtggaaa cgcgcggcat
     9061 cggagagaaa gaccatctct gcggaaatga gaacacgttc tatcctcctc taactgacac
     9121 cacgcacgcg atgcccgcag tcgccatgac cgaccagtat cgcggcaaag aactcaacga
     9181 ctcatgggaa ctgcacgaca agcgcagcgc gtttgtgggc acgttctcaa gatagtggca
     9241 aaaattgttt cacccaggcc atccgcgcgg atggccttgt tgttgtatgc gggaaaaatc
     9301 aagaaggttt gggcggatag accggatcct cccattcgcg tccttcgagt tcgtaagtca
     9361 tgattgtgcc cggtggcgcc ttcagccgca ctagctcctg cctcagaaac tcaatacctt
     9421 ttgcggcatc gtacaggtca acgtccaccc cgctgaaggg ctctgccaga tcgtcttccc
     9481 ctccatcggc ggagccgccg ccagtcacgc agcctagatc ggctttcgtt aaagcctcgt
     9541 ccagcggatc ctgaaaatta ttccagcgat cttccacatc gatatcgccc ggcataatca
     9601 cgaacacgaa cagcgggtta tctttgttga tcgacgagag cgaagtgtta cggtcttccc
     9661 gcaccacgct tttaatgtct ttgaagaaag tcatcacatc ccctcccctc cgcaccaccg
     9721 atcaatggct ctctgaccgc ttcaacagtt cttccagata tccaccccag atcgccggcc
     9781 aggtgtgcgt gccgtgtccg cgcgtctggt ccgtgatcgg cagcagcacg aacttcccgt
     9841 tcttcacccg cttgatgtcc ttgtccacga ttccaagctc gggcgggttg atgaaatcgt
     9901 cggcggagtt cacagcggtg agcggcgcgg taattttctc cagttgcggc tccgggttgt
     9961 aatttcgcga cgcatcaaag tagtagatca tgtcgttcgc gtccgtggtc ttcaccctgt
    10021 cggcgatgaa tttttccaga aagtcgtccg ccttttcccg cgtgggaaag ttcttctgca
    10081 tctgcagccc gctgctgccc atgatgagca agatttgcag cgctgcggcc aggccgtgcg
    10141 gctgctgcgt gtactcacca ttgttccagt ccggcgagtt gcggatgtca tccatgatca
    10201 tgcgccgcgt catgcggttg cgcccggcaa tttcgattgg ctggctggcc agcggcatgg
    10261 ccgcgtcaat gaaatccgga tgctgctccg cccacagcca gctgtgcatg ccgcccattg
    10321 aagttcccat caccagccgc agatggttca cacccagtcc ctgcgtgagc aggcggtact
    10381 gcagttcgat catgtcgtca tattcataat gcggaaagcg catgtgcagg ccgtcactgg
    10441 gcttgcttga tccgccgtgg cccacattgt ccggcaggat gacgaagtac ttcgtcacgt
    10501 ccagcagctg gccgggccca aacagcacgc cacaaaactg cggcgccata aactgcctgc
    10561 ctgtgccgcc ggtgccgtgc aggatgagca ccgcattgcg cacgcgtccg ctcgcatctt
    10621 tctgcggcgc gcctagcgtg taataatgca gcttgacctc aggcagcttt tcgcccgact
    10681 tgaactgaaa atctttcacc acgtaatcac ccggcttggg ctcaggacaa tcagcggcga
    10741 aagcagcgcc ggcgagaaag actacagcga gcagcagttg gcagcgattc attgggcctc
    10801 cgtgcaaagc ggaaagacta aatcattcgg cgcgtaaaag agaagactct tcatgccttc
    10861 acccacttgg tcataatgtg gcgcggatca ggcctaaaac cggcacgtat atagaggacc
    10921 tgtgcctcag gattttcata gccgacctct agccgcaacg ccgccatctc ttgttcccgg
    10981 cagatcgcct ctatccgcgc gatcacctcg cgaccaatcc cttgccgctg aaacggtgga
    11041 agaatgtaga gctcatccag caggccaaag cgtccgtact cgaagctgaa gcagaacgtc
    11101 agcacaacgt aaccggccag cctgtcgcca acatagatca gcatcgcgcg gccaagctca
    11161 cgattagtca gcatctgctt caccctcgcc gcagccgtct ccagctcaaa atgcatctgc
    11221 tggtcgcgat aaaactccgg catcagctcc agcagagcag gcaattcgga ttccgtcaca
    11281 agtcgaaata caggaacaag catcttcgca ttgtaagtgc gcgcggtgtc atttgcagga
    11341 accgcggcac ttccatctat aatggcgcgt ttcaaaatca ttcttctgga gaccccatgc
    11401 tggatcgtcg cgcctttctc gccgtctgct cgcgtttcgg agttgccgca actctgctgc
    11461 ccggagtgct ctgggcgcag gcgcaggaaa agggcaagat cacccgcgaa atgattgata
    11521 acgccgccgc cattgcggac gtgaagatcc ctgacgaata caaggacatg atgctcgagt
    11581 cgctcaacga cgctgagaag aactacgagc agatcttcgc gctgcacatg aagaatgacg
    11641 ttccgccggc ggtgatcttt gatcccgttc tgcccggaat gaagtttgag accgcgcgcc
    11701 gcccgccgaa aatctccgct gctccggccg ctgcgggcgg agtgcctaaa aatctggagg
    11761 atgttgcgtt ctactccgtc cgccagctcg ccgagctcgt tcgcacaaag aaagtctctt
    11821 cttcggcgct cacggacatg tatcttgaac ggctcaagcg ttacgatccc acgctgcact
    11881 tcgtcatcac gctcacggaa gatcgcgcca gggcgcaggc caaagaagcc gaccgcgaga
    11941 tcgcggcagg gaagtaccgt ggaccactgc acggtctgcc ctggggcgca aaggacctgc
    12001 tcgccgtcaa gggatatcgc accacctggg gcgcaggcgg attcgaagac cagaagtttg
    12061 atgaagacgc gacggtcgtc aagcggctcg atgaagccgg cgccgtgctg gtggccaagc
    12121 tcacgctggg cgcgctcgcg ctcggcgaca aatggttcgg cggcatgacg cgtaatccct
    12181 ggttccccaa acagggctcc agcggatcgt cggccggctc ggcctcggca accgcggcag
    12241 gctgcgtggc ctttgccatc ggctcggaga cgctcggctc cgtctcgtct ccttccacgc
    12301 gctgcggcgt caccggactg cggcccacct tcggcttcgt gccgcgcacc ggagccatgg
    12361 cgctctcctg gaccatggac aagcttggcc cgctctgccg cgccgtggaa gattgcgcgc
    12421 tggtgctctc cgcgatttat ggtcctgatg atcatgatcg cacggtgaaa aacgccgcct
    12481 tcaactggga cgccacgctc gactggcgca agcttcgagt cggctatctg caaaaagatt
    12541 ttgagatcca gcctcctcag caacagcaag ctcccaaaga agaaaaggaa ctcactgacg
    12601 cggagaagaa gaagcgcgag caggaaaccg ccgaccgcgc tgccgcgcgc gcccgccgcg
    12661 aatacgacca caagttcgac gaagcggcca tcgccaagct gcgcagcatg ggtgtgaacc
    12721 tcattcctgt ggaactgccc aagctgccct atggcgcaat gctctcgatg ctggaatccg
    12781 aagctgccgc t
//
LOCUS       DASQYP010000175         6512 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_261458, whole genome shotgun sequence.
ACCESSION   DASQYP010000175 DASQYP010000000
VERSION     DASQYP010000175.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 6512)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6512)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6512
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_261458"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            392..1375
                     /locus_tag="VE783_05630"
     CDS             392..1375
                     /locus_tag="VE783_05630"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52912.1"
                     /translation="MAFGNRNALVSIPCRLWRRSQPLQLLALVGGMLFIFVPVLWPQT
                     ADQPSGVPVTVIVSVEAKHGREMPTIYKEDVRVLLDRDRMPVIEWTPLEQGESSAQLL
                     LAIDDTVDPSIIGMQFHDLRKFIRGLPGGTEIGIGYIHFGMVQIAHDFTADHEAALRA
                     LRLPLGGASGMSSPYIALKDVMRSWPEATSRRIILMISSGVDALQPGPNDMYLDQAID
                     EAQRTGTQIFAIYAGLAGTFVDPTLDFTWGQNNLIELADATGGEAYFQAMRTPMSFAP
                     YLDEVAGRISHQYRLTFLAGPTKAGLRRLKLYTEVPGVKLIGPERVFVPAN"
     gene            complement(1674..2894)
                     /locus_tag="VE783_05635"
     CDS             complement(1674..2894)
                     /locus_tag="VE783_05635"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HYX52913.1"
                     /translation="MNLATILREALIALKRNRMRSALTMLGIIMGVGAFICVIAVGQA
                     GSGRVEQQLNSVGDNLIWVEAGSRAKSGVRVGTRGIKSLVVGDAQAVLQQIPGVKSAS
                     PNVDGRVQVVYGNLNWGTQYRGVSPEYFDIRKWYFRLGGSFTQEDMDRNAAVCVLGQT
                     VAANLFVDEEPLGKTINVKGVPFKVIGVLEGKGFSSSGFDQDDFVVMPITTAQKRITG
                     QEWLDDIFFSAVSRQDIPETTKQITALMRERHHLRAGEDDDFNIRTPEELIRAQLAAA
                     NIFTLLLGSAASFTLLVGGIGIMNIMLISVTERTREIGLRLAVGATEGEIQAQFLSEA
                     VAMSLAGGLLGVLAGIAGSYALHNTLNWEMKLSGDVMLVAAVFSAVVGIFFGYYPARK
                     AAQLDPIESLRFES"
     gene            complement(2898..4130)
                     /locus_tag="VE783_05640"
     CDS             complement(2898..4130)
                     /locus_tag="VE783_05640"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HYX52914.1"
                     /translation="MNLLANIAADLRLALVALVRNKMRTALTMLSIIIGVGAVIAMVG
                     IGQGADQAVQKQIANLGSNLLFVSSGSMNLGGLRLGWGATKTLVRGDVTAILKECPGV
                     VAAAPGTQTTAQVVYENDNWGTRIVGTTPEYFDVRTWPFQSGAAFNADDVTNATNVAV
                     LGETVRKNLFGSTEALGKTIRIGNLPFTVAGVLVAKGQSPAMNEDQDDIIIVPLTTVQ
                     RKITGQNWLRFIMISARSREASFASKPQIEALLRDRHRIREDQPDDFTVRNLAEFADV
                     ASESSKVMTALLGSIAGISLFVGGIIIMNVMLISVAERTREIGLRMAIGATESDVERQ
                     FLLEALSMSLIGGVMGILFGVGLSYTIAAMFGWPILISSTAIAGATLVSMLIGIFFGY
                     YPAQKAARLNPIDALHYE"
     gene            complement(4127..4930)
                     /locus_tag="VE783_05645"
     CDS             complement(4127..4930)
                     /locus_tag="VE783_05645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017953234.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HYX52915.1"
                     /translation="MSSEVANPVAASPLQPAVKQSVIIQTRDVHKTYQLGETKVHALR
                     GVTLDIGSGEFVAIMGASGSGKSTFMNILGCLDRPTSGQYLLEGTDVAQLDKKQLAAI
                     RNRKIGFVFQGFNLLARTTALENAELPTLYARIGKEERRKRATEALKMVGLGDRMDHF
                     PSQLSGGQQQRVAIARALVNQPSIILADEPTGNLDSRTSVEVMGIFQALNRRGLTIIL
                     VTHEHDIAQFTRRNIIFRDGKVRRDELIPEPMDAAEVLKTMPKLDEDAG"
     gene            complement(4935..6356)
                     /locus_tag="VE783_05650"
     CDS             complement(4935..6356)
                     /locus_tag="VE783_05650"
                     /inference="COORDINATES: protein motif:HMM:NF027890.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HYX52916.1"
                     /translation="MTLNRRNVAIFILLLLAVGIFAAFEFRGKTPAQYYTARVEQGDI
                     LQVVEATGTINAVTTVQVGSQVSGTIAKLDVDFNSKVKKGQLIAQIDPALFQGALEQA
                     KADLENARANLGVAEANTAKAKASELQLRADYERNIGLAKEGVVSPQALDLAKANAES
                     ATAQVAAAVAQEKQARAQLLQKQAAVQVAQTNLDYTTIHAPIDGTVVARNVDVGQTVA
                     ASLQAPTLFTIAQDLTKMQVYAKTDESDVGQIRTGQKVSFKVDAYPRDTFTGIVSQVR
                     MNSTIVQNVVTYDTIVDFDNPELKLFPGMTAYVTIPVAAANNVVKVPNGALRYKPDLA
                     ADELRALYQKYGIPETAARVQQARVEGNGGAAGTPAADRGTGSKTGRGLPAQNGAATQ
                     NGAAKSEGSHTETQIVWKQLPDKSLEPVRIRTGITDHTFTEAVQMLNGQIQPGDDLVT
                     GLAQGKSSSSAPRPGGPGVPKGR"
BASE COUNT         1258 a         2039 c         1857 g         1358 t
ORIGIN      
        1 ctgtcaatgt agctaacttc gcccaggttc agcaggatct tcttctttcc ggcggcgatc
       61 agctcgcgca ccgaattgcg gaacgcggca gtctcgtcac cgagcacaat gcgtccgctt
      121 acctccagaa tcgttatctc gcctacctgt ttctgtgtaa ccgtcaatgg catagaatcc
      181 cctcttacat cgctgttcgg ctgctcatgt cgccaacgcc gaacagcctt caactcatca
      241 tttcaccgca ccgccgggat gcggcggtga ttgccatcac cggcccgcgt gattgactgc
      301 aagcttgccg gcgattgtca cgtcctctgg tgactgcgcc cactgacctg ctgtgcatcc
      361 gaatggcact ctaaaaccag agaggtggct tatggcattc ggcaatcgca acgcactcgt
      421 atcaattccg tgccgcctct ggcggcgctc gcagccgttg caactgcttg cgctcgtggg
      481 cggcatgctt ttcattttcg tccctgtgct ctggccgcag acagccgacc agccttcagg
      541 cgtacctgta acggtgatcg tctcagtgga agcgaagcat ggaagagaaa tgcccaccat
      601 ttataaggaa gacgtacggg tgctactgga ccgcgatcgc atgcccgtca tcgaatggac
      661 accgctggag cagggcgagt caagcgctca gcttctactt gcgattgatg acacggttga
      721 tccttccatc atcggcatgc aattccatga cttgcgcaag tttatccgtg ggctgcctgg
      781 cggcacggaa attgggattg ggtatatcca cttcggcatg gtgcagatcg cccatgattt
      841 cacggccgat cacgaagccg cactccgagc gctccgcctg ccccttggcg gggcctccgg
      901 catgtcgagc ccctacatcg ccctcaaaga cgtgatgcgg agctggcccg aagccacgag
      961 ccgccgaatc atcctcatga tctcttccgg cgttgatgct ctccagcccg gaccgaatga
     1021 catgtatctg gaccaggcaa ttgatgaggc gcagcgcacc ggcacgcaga tttttgccat
     1081 ctacgccgga ctggccggaa cttttgtgga tccaacgctc gacttcacgt gggggcagaa
     1141 caatctgatc gaactggccg acgccaccgg cggcgaagct tatttccagg ccatgcgcac
     1201 ccccatgagc tttgcgccgt acctggatga ggttgcggga agaataagcc accagtaccg
     1261 gctcactttt ctggccggcc ccaccaaggc agggctgcgc aggctgaagc tctatactga
     1321 agtccctggc gtcaagctca tcgggccgga gcgagtgttt gtgccggcga actgagcaac
     1381 atcccaaaat gggcacaagc cagctactca ggcgcattaa ggcgcttccg ctgaagagcc
     1441 atcccggcgt acactcattg caagctcctc aaaaaattca gcagttccac tttgattgtg
     1501 tccttcaagc acacaccatc ggcgaagcac tcgtctctca tcacatcgta ttgcgagaag
     1561 tgccggtgct tcatcgccgc cagcccgaat gccaaggtgc tggaaactgc ggaacgcctg
     1621 caccactgcc agaaggacca gccgccaatc accaggaagc cgcggccgtc ccgctaggat
     1681 tcaaagcgca ggctctcgat gggatcgagt tgcgccgcct tacgcgccgg atagtacccg
     1741 aaaaatatgc cgaccaccgc cgaaaacaca gcagccacca gcatcacgtc gccggagagt
     1801 ttcatttccc agttcagcgt attgtgcagt gcgtaagaac cggcaatccc tgccagcacg
     1861 ccaagcagcc cgccggccag gctcatggca acggcctcac tgaggaattg ggcctggatc
     1921 tcaccttcgg tggcgccgac ggcgagccgc agcccgatct cgcgtgtgcg ttccgtcacc
     1981 gagatcagca tgatgttcat gatgccgatg ccgccgacca gcaaggtgaa tgaagccgcg
     2041 ctgcccagca gcagcgtaaa gatgttggcg gcggcgagtt gcgctcgtat cagctcttcc
     2101 ggggttcgga tattgaaatc gtcgtcctcg ccggcgcgca gatgatgccg ctcgcgcata
     2161 agggcggtga tctgcttcgt ggtctcaggg atatcctggc gcgaaacggc ggaaaagaaa
     2221 atgtcgtcca gccactcctg cccggtgatg cgcttctgcg ccgtggtgat cggcatcacc
     2281 acgaaatcat cctggtcgaa gcccgaggaa gagaagcctt tgccttccaa cacgccgatc
     2341 actttaaaag gcaccccttt tacattgatc gtcttgccca gaggttcctc gtcaacgaac
     2401 aggtttgcag caacagtttg tcccaacaca caaactgcgg cattgcggtc catatcctct
     2461 tgggtaaagg acccacccag ccggaagtac catttgcgga tgtcaaaata ttccgggctc
     2521 acgccgcgat actgcgtgcc ccagttcagg ttgccgtaca ccacctggac tcggccatcc
     2581 acgttgggtg aggcgctctt gactccggga atctgctgca gcaccgcttg agcatcaccc
     2641 accaccagcg acttgattcc acgcgtgcct acccgaacgc cactcttggc acggctgccg
     2701 gcctctaccc agatcaggtt gtcgcccacg ctattgagct gctgctccac ccggccggac
     2761 ccagcctgcc ctacggcaat cacgcagata aacgcaccca cgcccataat gattcccagc
     2821 atggtgaggg cgctgcgcat ccggttgcgc ttcagggcga tcagcgcttc gcggaggatg
     2881 gtggcaaggt tcattgttta ctcgtaatgc agcgcgtcaa tcgggttgag ccgcgctgcc
     2941 ttttgcgccg ggtaatagcc gaagaaaatg ccgatcaaca ttgagaccag cgtggcgccg
     3001 gcaatagcag tgctggaaat caggatcggc cagccgaaca tcgccgcaat ggtgtaggac
     3061 aagcccacgc cgaacaggat tcccattacg ccgccgatca ggctcatgga gagagcttcc
     3121 agcaggaact ggcgctccac gtcgctttcg gttgcgccaa tggccatgcg cagcccgatc
     3181 tcgcgcgtgc gctcggcgac tgagatgagc ataacgttca tgatgatgat gccgcccacg
     3241 aagagggaga ttccggcaat cgagcccagc agcgccgtca tgactttgct cgattccgaa
     3301 gccacatcgg cgaactcggc gaggttgcga acagtgaaat catccggctg gtcttcgcga
     3361 atgcgatgcc ggtcacgcag caacgcttca atctgcggct tggaggcaaa acttgcctcg
     3421 cgcgacctcg ccgagatcat gatgaaccgc agccagttct gcccggtgat cttccgttgc
     3481 accgtggtca gcggaacaat aataatgtca tcctggtctt cattcatcgc tggcgactgg
     3541 cccttggcca ccagcacacc ggcgacggtg aatggcagat tgccgatcct gatggttttg
     3601 cccaacgctt ccgtgctgcc gaacaggttt ttgcgcacgg tttcgccgag cactgccacg
     3661 ttggttgcat tggtgacatc gtcagcgttg aaggccgcgc cgctctggaa gggccaagtg
     3721 cgtacgtcaa aatattccgg cgtggtgccc acgatacgcg tgccccagtt gtcattttca
     3781 tagaccacct gtgccgtggt ctgcgttccc ggggccgcag cgacaacgcc cgggcattcc
     3841 ttcaggatcg ccgtcacatc tccgcgcacc agcgtcttgg tggcgcccca gcccagccgc
     3901 aggccgccca ggttcatgga accggagctt acgaacagca ggttcgatcc gagattggca
     3961 atctgcttct gcaccgcctg atctgctccc tggcctatcc caaccatggc gatgaccgct
     4021 cccactccga tgatgatgga tagcatggtc aacgccgtgc gcatcttgtt gcgcaccagg
     4081 gccaccagcg ccaggcgcaa gtcagccgcg atattggcga gcaggttcat ccggcgtcct
     4141 cgtcgagctt gggcatggtc ttgagtactt ccgcggcgtc catcggctcg gggatgagtt
     4201 catcgcgccg cactttacca tcgcggaaga ttatgttgcg acgcgtgaac tgggcgatgt
     4261 cgtgctcgtg cgtcaccagg ataatggtga ggccacggcg attgagcgcc tgaaaaattc
     4321 ccatcacctc aactgaagtc cggctgtcca gattgccggt gggctcgtcc gccagaatta
     4381 tggatggctg gttcaccagc gcgcgggcaa tcgcgacgcg ctgctgctgt ccgccggaaa
     4441 gctgggaagg aaagtggtcc atccggtccc cgaggccgac catcttgagt gcttcggtgg
     4501 cccgcttgcg ccgctcttct ttgccaatgc gcgcgtagag cgttggcagc tcagcgtttt
     4561 ccagcgccgt ggtgcgcgcc agcaggttga atccctggaa gacaaagccg attttgcggt
     4621 tgcgaatcgc ggccagctgc ttcttgtcga gctgcgccac atcggtgcct tccagcaggt
     4681 actgcccgga ggtgggccgg tcaaggcagc cgagaatgtt catgaaggtg gattttccgc
     4741 tgccgctcgc acccatgatg gccacgaact cgccactgcc aatatcgagc gtgacaccgc
     4801 gcagcgcgtg gaccttcgtc tcaccgagct gataagtctt gtggacgtcg cgcgtctgga
     4861 taatcactga ttgtttcacg gccggctgca gcggagatgc ggccacgggg ttggcgacct
     4921 ctgagctcat gcggctagcg tcctttggga acgcccggcc cgcccggacg cggcgcgctc
     4981 gaggaagact ttccctgcgc cagcccggtc accagatcat cgcccggctg aatttggcca
     5041 ttcagcatct gcacggcttc cgtgaacgtg tggtcggtaa tgccggtcct gatccggacc
     5101 ggctccagag atttgtcggg gagctgcttc cagacaatct gggtttcagt atgcgagcct
     5161 tcagattttg ccgcgccgtt ttgagttgca gcgccgtttt gagcgggtaa gccccgcccg
     5221 gtcttcgatc cggttccacg atcggcggcg ggagttcctg ccgcccctcc attgccttct
     5281 acccgcgcct gctgcacgcg cgcggctgtc tccggtatgc cgtacttctg gtagagagca
     5341 cgaagctcgt ccgccgcaag gtcaggcttg tagcgcagcg caccattcgg tactttcacc
     5401 acattgttcg cggccgccac cgggatagtc acataagcgg tcatgccggg gaagagcttc
     5461 agctcgggat tgtcgaaatc cacgatcgtg tcataggtca ccacgttctg aacgatcgtc
     5521 gagttcatcc gcacctgcga gacaatgcca gtgaaggtgt ctcgcggata ggcgtccacc
     5581 ttgaatgaca ctttctgtcc ggtgcggatc tggccaacgt ccgattcgtc cgtcttggca
     5641 tagacctgca tcttggtgag gtcctgcgcg atagtgaaga gcgttggcgc ctgtaatgac
     5701 gccgccactg tctggcccac gtctacgttg cgcgccacta cggtaccgtc aatgggggca
     5761 tgaatggtgg tgtagtccag gttggtctgc gcaacctgca ctgcggcctg cttctgcaga
     5821 agttgtgcgc gcgcctgctt ctcctgcgcc accgcagcgg ccacctgcgc cgtcgcactt
     5881 tccgcgttgg ccttggccag gtccagcgcc tgcggactca ccacgccttc tttggccagc
     5941 cctatattgc gctcgtaatc agcccgcagt tgcaactcac tcgctttggc cttggcagtg
     6001 ttggcctcag ccacgccgag attggcccgg gcattttcaa gatcagcctt tgcctgctcc
     6061 agcgctccct gaaacagcgc cggatcaatc tgtgcaatga gctggccttt ttttaccttc
     6121 gaattgaagt cgacatcgag cttggcgatg gtgccggaaa cctgcgaacc cacctgcacc
     6181 gtggtaacgg cattgatggt cccggtggcc tccactacct ggaggatatc gccctgttcc
     6241 acccgggcgg tgtagtactg agccggagtc ttgccgcgga actcaaaagc ggcaaagatt
     6301 cctaccgcca gaagcagcaa tataaagatg gcgacgttgc gtcggttcag ggtcaaaggg
     6361 cctcggtgcg aacggtcaga tcagtgcttt tttatcatat cgaatcagcg cacccgcggg
     6421 tgtgatggcg gtcaagcccg ggttgcgagg gaaagtttcg gcaccacgct cattcacccc
     6481 ttaacccagc ttgagccaag agccaggaag cc
//
LOCUS       DASQYP010000176         4745 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_48940, whole genome shotgun sequence.
ACCESSION   DASQYP010000176 DASQYP010000000
VERSION     DASQYP010000176.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 4745)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4745)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4745
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_48940"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..310
                     /locus_tag="VE783_05655"
     CDS             <1..310
                     /locus_tag="VE783_05655"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HYX52917.1"
                     /translation="REGKYVNAALPDLILLDLNLPKKDGRRVLEEIKADETLKHIPVV
                     VLTTSRSDEDVYRAYNLHANCYICKPVDFEQFIRIVSSLEEFWFTMVKLPARRSTAGE
                     "
     gene            346..1503
                     /locus_tag="VE783_05660"
     CDS             346..1503
                     /locus_tag="VE783_05660"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HYX52918.1"
                     /translation="MTTAAAQKAETIALLLVEDNPPDAGLVREALAEGKSAQFSIEHV
                     DRLSKALQCLRTRRFDAVLLDLTLPDSQGVGTFTSVLATAPHTPMLVLSGIDDDAMAT
                     EAVELGAQDYLIKGQFDSHWLPRAIRYAIQRKRAEEDIKLMNESLERRVGERTHQLTA
                     ALNELDGLVYSVAHSLRSHLRQLNGFSEALIQDLSDATELDPAHLSSLQSMQEEARLL
                     GQGLVEQMLKLSTIGRQALRISKTALRPLAEEARNEVMKEINGRSVQWDFKELPAVDC
                     DPALIKEVFVNLFANALRFTRSREQAEIEVGHTLEHGRTAIFVYNNGKTLTPEEAKAL
                     FEIPHVHHSGDCEGLGLNLAVAQRIVQRHGGEMWAAPGQGEGAMFYFTLGD"
     gene            1602..2459
                     /locus_tag="VE783_05665"
     CDS             1602..2459
                     /locus_tag="VE783_05665"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HYX52919.1"
                     /translation="MAAIEFEMADLVPIIKVNGVELFYKESGSGPETIVFSHGLLMDH
                     SMFDPQRAVFEKRFRVIAYDHRGQGQSPDPGYGHDMDMLAKDAATLIQALNVGPCHFA
                     GLSMGGFVGMRLASRRRELVKTLTLMNTGADPEPKSSRRKYAVLARLSRILGVKPFVG
                     VAMRALFGRSTLKASNPSTQVMLSEWKAKLASRPKYVANSLLAVMNRPEFPVDDLALI
                     RCPTLVITGEEDVSQPPFRGQRVAAAIPKARTVNIPGCGHSCSLEAPEAVIKAMQELM
                     GNTAAALGG"
     gene            2539..3978
                     /locus_tag="VE783_05670"
     CDS             2539..3978
                     /locus_tag="VE783_05670"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52920.1"
                     /translation="MKPPFVRRLLSLAMINVFLAAQVFATCGGGGGGGMGGMSGGSMP
                     QVYVVPWKLVQPTDQLKDGLAVYWFPASVEEVNKSSLRESRTLQLYSQQCVTMGLADA
                     RTSMGQKFVPDGKLPVALIVQPDGTVVGKLESKDGKLRVGDLEKLVESEMKKRDAAVK
                     EKMESAKGKLKSGDKDGAIAELQTVLQQKCMFPSRAKDAAKELKKLGVETADIPAAPN
                     FDPAVGARIEKTLRAGLKAEDAARYTEAERLYKAAHELDSADPTPLRFLGELYRHHIG
                     DWARARQVFDSILAMPADPMSRAVALHGLGKMTIHEGEFKKGLHLMEASVAEFPLALA
                     YRNLAVYWNSEGDRVKADEYTKLALKLDPKDPYNLIFAAAFQAGSGHPEEALKIAHQN
                     EKLLPASYNLAAIYAQAGEKQKALDLLKRHFFEYERNEAVRSKEMMEARVDAVFTSLM
                     EDKDFLALTSGADGRLPIPMRNMTKPAGN"
     gene            4154..4462
                     /locus_tag="VE783_05675"
     CDS             4154..4462
                     /locus_tag="VE783_05675"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxypeptidase-like regulatory
                     domain-containing protein"
                     /protein_id="HYX52921.1"
                     /translation="MPPWLRRIDKIPDAELTLFEYQTIFPSRVIAKTRTDSGGKFAFP
                     TVNAGHYTLKIKAGDHEDYFDIEVTDRVPTTAKVLINISPVEPDCTGGHELDVYPEQK
                     "
BASE COUNT         1071 a         1287 c         1394 g          993 t
ORIGIN      
        1 ccgcgagggc aagtacgtga acgccgctct tcctgatctc attttgctgg acctgaacct
       61 gcccaagaaa gatgggcgcc gggtgctgga ggagatcaaa gcagatgaaa cgctgaaaca
      121 tatacctgtg gttgtgctca caacctcgcg gtctgacgaa gacgtctatc gtgcttacaa
      181 tcttcatgca aactgttata tctgtaagcc agtggatttt gagcaattca tccgcatcgt
      241 gagttcgctt gaggagttct ggtttaccat ggtaaagctg cccgcgcgac gatcaactgc
      301 gggtgaataa ccgcaacccc gttacaaact tccggagagc cccgaatgac aactgcggca
      361 gcacaaaaag ctgaaactat cgcattatta ctggtcgaag acaatcctcc cgatgccgga
      421 ctggttcgcg aagccctggc agaggggaag agtgcccagt tttcaattga acatgtggac
      481 cggctcagca aggcgctcca gtgcctgcgg acgcgccgtt ttgacgccgt actcctcgat
      541 ttgactttac cggacagtca gggtgtcggc acctttacca gcgtactggc aactgcgcca
      601 cacaccccaa tgttggtgct gagcggcatt gacgatgatg cgatggctac tgaagccgtg
      661 gaactgggcg cccaggatta cctgatcaaa ggccagttcg atagccactg gcttccccgc
      721 gccatccggt atgccatcca gcggaagcgc gcagaggaag acataaagct catgaatgag
      781 tcgctggaac ggcgagtggg agagcgcaca catcagttga ccgcggcctt gaacgaactc
      841 gacggccttg tgtattccgt ggcccactcc ctgcgctccc atttgcgcca gcttaatggt
      901 ttctctgaag cgcttattca ggacctgagt gacgcgacgg agcttgaccc ggcgcatctg
      961 agcagcctgc agagcatgca ggaggaagcc cgactgctgg gacaaggatt ggtggagcag
     1021 atgctcaaac tcagcaccat tgggcggcag gcgctcagaa tcagtaagac cgccctgagg
     1081 ccccttgctg aggaagcccg caacgaggtt atgaaagaaa tcaacgggcg cagtgtgcag
     1141 tgggacttca aagaactgcc ggcggttgat tgcgatcccg ctctgatcaa agaggtcttc
     1201 gtcaacctgt tcgcgaatgc gctgcgcttc acgcgctccc gtgagcaggc ggaaatcgag
     1261 gttggacata ctctggaaca cggacgcacc gcgattttcg tctacaacaa cggaaagacg
     1321 cttacccccg aagaagcaaa ggcgcttttc gagattccgc atgtacacca ctccggggac
     1381 tgcgaagggc tggggttgaa tctggcggtg gcgcaaagaa tcgtgcagcg tcacggtggg
     1441 gagatgtggg ctgctccggg ccagggcgaa ggagccatgt tctatttcac gctgggcgat
     1501 taggtgctct gcgatcatca gtaaggtccg ggcagggtcg tcttctacag ttccgccaaa
     1561 aaatagcggg atgcaccgcc agcttggcac atgatagagt cttggccgca atcgaattcg
     1621 aaatggcgga tctggtgccc ataatcaagg tcaatggtgt tgagctgttc tacaaggaat
     1681 ccggcagtgg tccggagaca attgtcttct cccatgggct gctgatggac cacagcatgt
     1741 ttgatccgca gcgcgcggtt ttcgagaagc gcttccgggt gattgcttac gaccatcgcg
     1801 gacaagggca gtcacccgat ccaggctacg gccatgacat ggacatgctg gcgaaggacg
     1861 cagccactct cattcaggcc ctgaatgtgg ggccttgcca ttttgccgga ctctcaatgg
     1921 gcgggtttgt gggcatgcgg ctggcttcgc gccgccgcga gttggtcaag acactaacgc
     1981 taatgaacac cggcgctgac ccggagccga aatcgagccg cagaaaatat gctgtgctcg
     2041 cccgcctctc gcgaatactc ggcgtaaagc catttgtggg cgtcgcgatg agagcattgt
     2101 tcggacgcag tacgctcaaa gcgagcaatc catccactca ggtcatgctg tcagaatgga
     2161 aggccaaact ggcatcgcgc ccgaagtacg tggctaactc gctgcttgcg gtgatgaacc
     2221 ggcctgaatt tccggtcgat gatctcgccc tgatccgttg ccctacgctg gtcatcaccg
     2281 gtgaagaaga tgtctcgcag cctccattcc ggggtcaacg cgttgctgca gccatcccta
     2341 aagcacgcac ggtaaatatt cccggctgcg gccactcctg cagcctggag gcgcctgaag
     2401 cggtcatcaa agcgatgcag gaactgatgg ggaacacggc tgcagccctt ggtggttagt
     2461 cgttggctgg ctccggccag gcagatggac gttagcggct gctcaaacgg cttctctgct
     2521 gggctataat ctctttccat gaaacccccg tttgtacgcc gtctcctgtc ccttgcaatg
     2581 atcaatgtct tcctggctgc ccaggttttt gccacctgcg gtggcggcgg tggcggcggc
     2641 atgggcggca tgagcggcgg ctccatgccg caggtttatg tggtgccgtg gaagctggtc
     2701 cagcccaccg atcagctcaa ggacggcctt gccgtttact ggttcccggc cagcgtggaa
     2761 gaggtaaaca agtccagcct gcgcgagtcg cgcaccctac agctctattc tcagcagtgc
     2821 gtcaccatgg gtctggcgga tgccaggacg tccatggggc agaagttcgt tcctgatggc
     2881 aagctgccag tggctctcat tgtccagccg gacggaaccg tggtgggcaa gctggaatca
     2941 aaagatggca agctgcgcgt cggcgacctg gaaaagctgg ttgagagtga gatgaagaag
     3001 cgcgacgcgg ctgtcaaaga gaaaatggag agcgccaaag gcaagctgaa gtccggcgat
     3061 aaagatggcg ccattgcgga actccagaca gtgctacagc agaaatgcat gttccccagc
     3121 cgtgcgaaag atgcagccaa agagctgaag aagctgggcg tggagactgc ggacattccc
     3181 gctgcgccga actttgatcc agctgttggc gcaaggattg aaaagacact gcgcgccggc
     3241 ctgaaagccg aagacgcggc ccgttatacg gaagccgagc ggctgtacaa agccgcccac
     3301 gagctggatt cggcagatcc cacgccgttg cgcttcctgg gtgagcttta tcggcatcac
     3361 attggcgact gggcccgtgc ccgccaggta tttgacagca ttttggccat gcctgccgat
     3421 cccatgtcgc gcgctgtcgc gctgcatggt ctgggcaaaa tgacgatcca tgaaggcgag
     3481 ttcaaaaaag gattgcacct gatggaagct tccgtggctg agttcccgct ggcattggca
     3541 tatcgcaatc ttgctgtcta ctggaacagc gaaggcgatc gcgtgaaagc cgatgagtac
     3601 accaaactgg ctctcaagct tgatcctaaa gacccctaca atctgatctt tgccgcagca
     3661 ttccaggccg gcagtggaca tccggaagaa gctctgaaga tcgcccacca aaatgaaaag
     3721 ctgctgcccg cttcctacaa tctggccgcg atctacgctc aggctggcga gaagcagaaa
     3781 gcgcttgacc tgctcaagcg gcacttcttt gaatacgaac gaaatgaagc tgtccgcagc
     3841 aaggagatga tggaggcgcg tgtggacgcg gttttcacat cattgatgga agacaaggac
     3901 ttcctcgctc tgaccagcgg ggcggatggt cgcctgccga tcccgatgcg gaacatgacg
     3961 aagccagcgg gaaactaacc cgctcatcat ggaggcacgg agacacgaag ggatgggaaa
     4021 gttaaagcgt gctgcgacat gcgttctgct aggtttcgct ctgcttggtc agtacgcgca
     4081 cgcttgcacc tttgcacgag gttatttcca ccagttaact gcgttgaaag gaatcgtggt
     4141 agggagtcat tttttgccgc cgtggttgcg acgcatcgac aaaatccccg atgcggagct
     4201 aacgcttttc gagtatcaga ccatctttcc gagtcgcgtg atcgctaaga cgagaacgga
     4261 ttccgggggc aaattcgcgt tcccaacggt caatgctggc cattacacgc tgaagatcaa
     4321 ggctggcgac catgaggatt actttgatat tgaggtgaca gacagggtac ccacgacggc
     4381 caaggtgctt attaatatct ctcccgttga gcctgactgc acgggtggcc acgaattgga
     4441 tgtttatcca gagcagaaat aacggccgat cagcttcctt tgtgttcctt cgcgtccttt
     4501 gtggttaaaa agaacccaga tcttgcctga ttaatctttc taacattcct ctaatgttgg
     4561 cgtaagaaag ggctggcata ctccttctcg tggccggggc agaacgacac aagcggcccg
     4621 aacaaataaa aaatcgagcg agggactcat gtttgaaggt atttttcagc caatgcacct
     4681 gctggtgatt ctgatcatcg ccctgttgtt ctttgggcct ggcaaggtgg ccgatctcgg
     4741 caaag
//
LOCUS       DASQYP010000177         5165 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_180866, whole genome shotgun sequence.
ACCESSION   DASQYP010000177 DASQYP010000000
VERSION     DASQYP010000177.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 5165)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5165)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5165
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_180866"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(220..2943)
                     /locus_tag="VE783_05680"
     CDS             complement(220..2943)
                     /locus_tag="VE783_05680"
                     /inference="COORDINATES: protein motif:HMM:TIGR03434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HYX52922.1"
                     /translation="MKLLSSLRTFMESLFRRHRVELEMDEELLSHIQHRADDLQGAGT
                     SRAEAERQARIEFGGYEHYKEECRESVGVHFIETVLQDLRFGARVLRKSPGFTTIAVL
                     TLALGIGANTAIFSLINTVMLRLLPVQKPQELIEVLRLNASDNQPTSGFTYELWDQLR
                     RQQDIFSSTFAWSTGTFDLAQGGAVRYANGVFTSGSYFPTLGIKPAVGRLFAAADDQR
                     GCPALAVLSYGFWQEHYGGSRTALGSTISLRQQPFEVIGVSAPGFNGMEVGSRFDVTI
                     PICASRVFDGKQSRLDVRDWWWLRIAGRLKPGIPPDHVDARLRVLSPNVWGAAIPQDW
                     PPEWREKFRTRIFVSAPAATGISELREQFQRPLAVLMAVVGLVLLIASANLASLMLAR
                     AASRSKELAVRKALGASRGRLVRQLLVESLLLSFAGGMLGMLFARWGAALLVRYISTH
                     DSNVFVDLSLDLRVLGFTAGIAVFTAILFGVLPALRSSRVSVIAAMKDRSSDARDGLS
                     LRLRSGKWIVAAQVAFSLVLLVVSGLFLRTLRKLTVLDLGFDRSNVLVVNANSRPANI
                     PAAERVAIFDDIESRLRALPGVVSVGRSTRTPITNGETSGPLLVDRPNAPRGPDAVVW
                     MNFISPGYFETLRTPMLAGRPFDASDSATSEKVVIVNEAFARKFLPGEKVIGQYVKRD
                     EGKDGVPPTVLRIVGIVRDAKYESVREVALPQAFFPITQTGPNFDDYQAQDFELRTSL
                     RPSTVAAQVQSLVGQLNKSISLDFTSLAEQVDDSLVQERLLATLSAFFGALALLLAMI
                     GLYGAVSYGVNQRRGEFGVRIALGAAPISILRLVMRDVSVMLAGGSLGGIIMSLFAVR
                     AVQKFLFGLTPQDPATFAGAVVLLSAVAVLAAYLPARRAMNVDPMAALRYE"
     gene            complement(2940..3281)
                     /locus_tag="VE783_05685"
     CDS             complement(2940..3281)
                     /locus_tag="VE783_05685"
                     /inference="COORDINATES: protein motif:HMM:TIGR03433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PadR family transcriptional regulator"
                     /protein_id="HYX52923.1"
                     /translation="MPDQAQILPGTLDLLILKAVSLGPLHGYGVLLRIGQISGGALLV
                     EQGALYPALFRLVKQGLLKASWGTSENNRRAKFYELTTAGRKRLREEAEGWKRLVSAI
                     GSALAATPEEV"
     gene            3511..4905
                     /locus_tag="VE783_05690"
     CDS             3511..4905
                     /locus_tag="VE783_05690"
                     /inference="COORDINATES: protein motif:HMM:NF014081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HYX52924.1"
                     /translation="MRTKLCFTVLFVAMLPIAGICSDLVLSHAKIYTSPTEPPVEDGV
                     VLIHNGRITAVGPSSTIKAPHFARAVTTIDCHGMTVTAGFWNSHVHIFTAELLDAEHR
                     SSAELAGELKKMFLRRGFTTVFDTASVLANTNNIRNRIAKGEIEGPRIFTVGDPFYPQ
                     GGTPVYIKGFLEQHHIPSAEVSSPEEAVARVRRQIEAGADGAKIFAGAIVQTGVVPMP
                     LDIAKAIVAETHRHGKPVFAHPSDTQGLEVSLQSGVDILAHTAPMSGDWSPAFVQRLK
                     DAHMALIPTLTLFDVEADKAGVSSEEKQQWLRQASQELKAYSEAGGEILFGTDAGYID
                     RYDTTEEFQLMARAGMSYQHILASLTTNPAKRFGLANKSGRIAKGMDADLVVLNGDPA
                     QDVTAFSKVRYAVRAGKLIYSLRGWRQPVFLNWRKRWLNWRKPWHCANDNGGAGQGKA
                     DHRFRWPAFLRSVA"
     gene            complement(4902..>5165)
                     /locus_tag="VE783_05695"
     CDS             complement(4902..>5165)
                     /locus_tag="VE783_05695"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52925.1"
                     /translation="DSDLRSPIVEPPASAADAYPISGMTYLIIPKDGADRNKRAALKD
                     FLQYVITQGQQISPNLDYSQIPQSLEQADQKILGALTASGQAL"
BASE COUNT         1117 a         1483 c         1611 g          954 t
ORIGIN      
        1 tgcagcctta ccgtcctgaa gcaagggcac accttcaagc tcagcgactt tctcacggga
       61 gagctgccgc tgaaggacca ggtggcggtg ggtcaagctc tgacgaacct gggctcgtag
      121 atattttgag cagtcaacct ccctgacttg agtttttcaa gtccgggagt ttttttgtcg
      181 ctaggaccaa agggcaagcg ctctggcgag gctaaagctc tattcgtacc tgagcgccgc
      241 cattggatct acgttcatgg cgcgccgcgc tggtagatat gcagccagca cggcgactgc
      301 agacaagaga acaacagcgc ccgcgaacgt agccggatcc tgcggtgtga gcccgaagag
      361 aaacttctgt actgcccgga ccgcgaacaa cgacataatg atgccgccga gcgagccgcc
      421 cgcgagcatg actgagacat cgcgcatcac caggcgcagg atggagatgg gagccgctcc
      481 cagcgcaatg cgcacgccga actcgccgcg acgctgattc acgccgtagc tcactgcgcc
      541 ataaagtccg atcatcgcca atagaagagc cagcgcgccg aagaacgcgg aaagcgtagc
      601 cagcaggcgc tcctgaacga gcgaatcatc tacctgttcc gccagcgaag tgaagtcgag
      661 agagatactt ttgttcagct ggcccaccag gctttgcacc tgcgcggcga cggttgaggg
      721 ccgcagggag gtccgcagtt cgaaatcctg cgcctgataa tcgtcaaagt tgggtccggt
      781 ttgggtgatg gggaagaagg cctgagggag ggcaacctcc cgtactgatt catacttcgc
      841 gtccctcacg atgccaacga tgcgcagcac cgtgggcggc acaccgtcct tgccttcatc
      901 acgcttcacg tactgcccaa taaccttttc gccgggcaga aacttacggg caaaagcttc
      961 attcacaatg accaccttct cagaagtagc ggagtcactg gcatcgaagg ggcggccggc
     1021 gagcatgggc gtgcgcagcg tttcaaagta gccgggtgag atgaagttca tccatacgac
     1081 tgcgtccgga cccctgggcg cgttgggccg gtccaccagc agtggcccgg aagtctcgcc
     1141 gttagtgatg ggagtgcgcg ttgatctgcc cactgaaacc acgccgggaa gcgcgcgcag
     1201 gcggctttcg atgtcatcga agatcgcgac gcgttctgcc gccggaatgt ttgccgggcg
     1261 ggagtttgcg ttgaccacca gcacattgct gcggtcgaag ccgagatcga gaacggtgag
     1321 tttgcgcaac gtgcgcagaa acaatccgga gactacgagc agcaccaggg aaaatgccac
     1381 ctgggcggca acgatccatt tgcccgagcg aagccgtaga gacaggccgt cgcgggcgtc
     1441 gctggagcgg tctttcatgg ctgcgatgac ggagactctt gacgagcgca gcgcaggcag
     1501 cactccgaac aggatcgctg tgaacacggc aatgcccgcg gtgaatccga gcacgcgcag
     1561 gtcgagcgac aggtcgacga aaacattgct gtcgtgggta gagatgtagc gtaccagcag
     1621 ggccgcgccc cagcgtgcga acagcatgcc gagcatgccg ccggcaaatg agagcagcaa
     1681 cgactcaacc agaagctggc gaaccagcct gcctctggaa gcaccgagcg ctttgcgtac
     1741 cgcgagctct ttgcttcgcg atgcggcgcg cgccagcatc aggctggcca gattcgcgga
     1801 ggcaatcaac agcaccagcc ccaccacggc catgagcact gcgagcggac gctggaactg
     1861 ctcgcgcagc tcagagatgc cggttgcggc gggagcgctg acgaagatgc gggtcctgaa
     1921 cttctcgcgc cattccggcg gccagtcctg gggtatggcc gcgccccata cgtttggcga
     1981 aagcactctt agacgcgcgt ctacgtggtc agggggaatg ccgggtttca gccggccggc
     2041 aatcctcagc caccaccagt cgcggacatc aaggcgcgat tgcttgccgt cgaaaacgcg
     2101 gctggcgcag ataggaatgg tcacatcaaa ccggctgccg acctccatgc cgttgaagcc
     2161 cggcgcgctc acgccgatga cttcaaaagg ttgctgcctg agcgatatgg tgctgcccag
     2221 cgccgtgcgc gagccgccgt aatgctcctg ccagaagcca tagctcaaaa cggcaagtgc
     2281 ggggcagccg cgctggtcat cggcggccgc aaacagccgg ccgactgcgg gtttaatgcc
     2341 gagcgtgggg aagtagctgc cgctggtgaa caccccattt gcatagcgga ctgcgccacc
     2401 ctgcgcgaga tcgaaggtcc cggtgctcca ggcgaaggtg ctggaaaaga tgtcctgttg
     2461 gcggcggagc tggtcccaca gttcataggt gaacccggaa gtgggctggt tgtcgctggc
     2521 gttcagccgc agcacttcaa tgagttcctg cggcttctgc accggaagca agcgcagcat
     2581 gactgtgttg atcaggctga agatggcggt gttcgcgccg atgcccagcg ccagagtcag
     2641 caccgcaatc gtggtaaagc cgggcgactt gcgcagcacg cgtgcgccaa agcgcaggtc
     2701 ctgaagcacg gtttcaatga aatgcacgcc cacgctctcg cggcactctt ccttgtagtg
     2761 ctcgtagccg ccgaactcaa tgcgcgcctg gcgctcggct tccgcgcggc tggtgccggc
     2821 gccctggagg tcgtcggcgc gatgctggat gtgtgaaagc agctcttcat ccatctcaag
     2881 ctctacgcgg tgacggcgaa agaggctttc catgaaagtg cgcagagaac tcagcagctt
     2941 catacttcct ccggtgtggc ggccagggca gagccaatgg cggagacaag ccgcttccat
     3001 ccttcggctt cctcgcgcag gcgcttgcgg ccggcggtgg tgagttcgta aaacttggca
     3061 cgacggttat tttccgaggt gccccagctc gccttgagca gcccttgttt caccagccgg
     3121 aacagcgccg gatagagcgc accctgctcc accagcaggg cgccgccgga gatctgtcct
     3181 atgcgcagga gaacgccata gccatgcagc gggccgagcg agacggcttt caggatgagg
     3241 agatcgaggg tgccgggaag gatctgcgcc tggtcaggca aggaatgctc ctcctaagat
     3301 agttaggaag gtagcactga ctctcctaag ctgtcaagga gagtgcgccc ggagcctgtg
     3361 aggagggtgt ggtgcattga gcaaggcagg gaaggccgaa gaattgccag agatgccaaa
     3421 aagtgtcaga caatccaaat tgaaaggcaa tgactaccgc ggatcaacgc ggatgaactg
     3481 aaacctccaa tgaagcgtat aactcaagtg atgcgaacga agctttgttt taccgtgttg
     3541 ttcgttgcga tgctgcccat agcgggcatt tgctctgatc tggtgctatc gcacgcgaaa
     3601 atctatacct cacccaccga gccccctgtg gaagacggag ttgttttgat tcacaatggc
     3661 cgcattactg cggttggtcc gagcagcacg atcaaagccc cccattttgc tcgcgccgtg
     3721 accacgattg attgtcatgg aatgactgtg acggctggat tctggaacag ccacgtgcac
     3781 atctttaccg cggaattact cgacgcggag catcgctcgt ctgcagagct ggcgggcgag
     3841 ctcaaaaaga tgttcctccg ccggggattt acgactgtgt tcgacactgc atcagtgctg
     3901 gcgaatacga acaacatcag gaaccgaatc gcgaaaggtg agatcgaagg cccaagaatc
     3961 ttcactgtgg gagatccgtt ttacccgcag ggtggcacgc ccgtttatat aaaaggcttc
     4021 cttgagcagc accatatccc atcggctgaa gtgagttcgc ctgaagaggc tgttgcgcgc
     4081 gtgcgccgcc agatcgaggc cggcgccgac ggcgcaaaga tttttgccgg cgccattgtt
     4141 caaaccgggg tcgttcccat gccgctcgac atcgcaaagg caatcgtcgc tgaaacccac
     4201 cgacacggta agcccgtctt tgctcatcct tcagacacgc agggccttga agtatcgttg
     4261 caaagcgggg tagacatact ggcccacacc gcacccatga gcggtgactg gagtcccgca
     4321 tttgttcagc ggctgaaaga cgcacatatg gcgctgattc ccacgctcac gctgttcgat
     4381 gtggaggcag acaaggcagg agtctcttcc gaagagaaac aacagtggct gcgccaggcg
     4441 agccaggagt tgaaagcgta ctccgaggca ggtggcgaga tcctgttcgg caccgacgca
     4501 gggtatatcg accgctacga taccaccgaa gagttccaac tcatggcacg tgccggcatg
     4561 agctaccagc acattctggc atcattgacg acgaatccgg caaagcgctt cggcttggct
     4621 aacaaaagcg gccgtatcgc caaaggcatg gacgctgacc ttgtggtgct gaatggcgat
     4681 cctgcccagg acgtaacggc attcagtaaa gttcggtacg ccgtcagggc aggcaagttg
     4741 atctactcac tgaggggctg gagacagcca gtctttctta actggcggaa gcggtggctg
     4801 aactggcgga agccgtggca ttgcgccaac gataacggcg gggccggtca gggcaaagcc
     4861 gaccaccgat tcaggtggcc ggccttcttg aggtctgtgg cttagagcgc ctgaccggaa
     4921 gcggtgaggg caccgagaat tttctggtcg gcttgctcca gcgactgcgg aatctgtgaa
     4981 tagtcaaggt tgggcgaaat ctgctggccc tgggtgatga catactgaag aaaatctttc
     5041 agggcggcgc gcttattgcg atcagcaccg tctttgggga tgatcaggta ggtcatgcca
     5101 ctgatgggat aggcgtctgc cgcggaggcc gggggttcga caattgggct gcgcaagtca
     5161 ctatc
//
LOCUS       DASQYP010000178         3504 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_155052, whole genome shotgun sequence.
ACCESSION   DASQYP010000178 DASQYP010000000
VERSION     DASQYP010000178.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 3504)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3504)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3504
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_155052"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..320
                     /locus_tag="VE783_05700"
     CDS             <1..320
                     /locus_tag="VE783_05700"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52926.1"
                     /translation="RPQQHQERRKVYMPLTLVHPGNESKPQPAPPPARLKSLKGKKIG
                     LLDISKPGGSFFLDRLEQLLREKYEVADAIRLKKPTYTKNAPQGIIDQLRTVDAVVEG
                     LAD"
     gene            342..560
                     /locus_tag="VE783_05705"
     CDS             342..560
                     /locus_tag="VE783_05705"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52927.1"
                     /translation="MHDTIRLENLGIPAVPVATTEFTAPARIQAGTLGRPDFDAVYVP
                     HPIQDQTPQQIAARADAVAAQIVRRLTA"
     gene            557..994
                     /locus_tag="VE783_05710"
     CDS             557..994
                     /locus_tag="VE783_05710"
                     /inference="COORDINATES: protein motif:HMM:NF021486.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2203 domain-containing protein"
                     /protein_id="HYX52928.1"
                     /translation="MKTFTLQEAQTLLPVLKALLKRAMDAKELIEAVDKEFQDLHHRI
                     FLFGGLFIDVPAKARRRAERDKAVQDIKDTMGEIDSIGVQVKDLDIGLLDFPCHVDDE
                     VILLCWKYGEEKIEFWHGMEEGFAGRKPIDERIARAKKREKPN"
     gene            1315..1389
                     /locus_tag="VE783_05715"
     tRNA            1315..1389
                     /locus_tag="VE783_05715"
                     /product="tRNA-Asn"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1347..1349,aa:Asn,seq:gtt)
     gene            1742..>3504
                     /locus_tag="VE783_05720"
     CDS             1742..>3504
                     /locus_tag="VE783_05720"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52929.1"
                     /translation="MSTTYLPSNASKARIREAENARKNRLEIVKAYSHGQISRRDLIK
                     WGLITSAGALAPIHGLNPFVKSAYAEDFDIPTGAPRSPLFGAQPFTQPMARFDVLPRN
                     PVASLNPAPQAQANQTQQTVDPALGGGFGPIEGRPPGPIWAHQQFTQLPPNVAISATM
                     EGAKATNIYNPGVASNFNSGIDAAATINPRFHPLLPDQGPLALWTYNGTFPPKLMQMR
                     YGDPALFRLSNKLPFDVRQNGGFGRHTISTHEHNGHHGAENDGFTGAYFFPGQFYDYH
                     YPIVLAGRNSVNTDATDPRAGGPDDNGGINKIAGDWHETMSTHWFHDHMFSFTSQNVY
                     KGIAGMFNIYSALDRGNEEINDGVNLRLPSGTLKSWGNQEYDVNLMLADKAWGQDGQL
                     YFDIFDFDGFLGDAMTVNLFYKPFFEVERRKYRFRILNGAVSRFFKVAIADASGNAQP
                     MIFIANDGNLMPSPVVLTQLDEQGIAERYDIVVDFSKYNIGDKLWMVNLAEHQTGKKP
                     SADLTLAQALSGTSQDPCVGKFLEFRIVRDPATPDVSQVPATMIPNPDLASIPVSRER
                     TFLFGSGGAQNLDDPVSTFFGP"
BASE COUNT          771 a         1049 c          997 g          687 t
ORIGIN      
        1 cccggccgca acaacatcag gaaagaagga aggtttatat gccgttgaca ctcgtacatc
       61 ccggaaatga gagcaagccg cagccagctc cgccgccggc gcggttgaag tcgctcaagg
      121 ggaaaaagat cgggctgctc gatatcagca agccgggcgg cagcttcttt cttgatcggc
      181 tggagcagtt gctgcgcgag aagtatgaag tggccgacgc gattcggctg aagaagccga
      241 cctacaccaa gaatgccccg caggggatca tcgaccaact gcgcacggtg gacgcggtgg
      301 tggaaggtct ggctgattga gggtcgtgca ccacgtgcag tttgcacgac acgatcaggc
      361 tggaaaatct cggcataccg gcagtgcccg tcgccaccac ggagtttacg gcgcctgcgc
      421 gcatccaggc cggcacgctg gggcgtccgg actttgacgc ggtttacgtg ccgcatccaa
      481 tacaggacca gacaccgcaa cagattgcgg cccgcgccga tgccgtggcg gcgcaaatcg
      541 tgcggcggct tacggcatga agacctttac tctgcaggaa gcacagacac ttctgcccgt
      601 gctgaaggcg ctgctcaagc gtgccatgga cgccaaagag ctgatcgagg ccgtggataa
      661 agagttccag gacctccacc atcgcatttt tctttttggt ggactcttta ttgacgtgcc
      721 cgctaaggcc cgccgccgcg ccgagcgcga caaagccgtc caggacatca aggacacgat
      781 gggcgaaatt gattccattg gtgtgcaggt aaaagacctc gatattggcc tgctcgactt
      841 tccctgccat gtggacgacg aggttattct gctttgctgg aagtacggcg aagagaagat
      901 cgaattctgg cacggcatgg aagagggctt tgccgggcgc aagccgatcg atgagcgtat
      961 cgcgcgagcc aaaaagcgag aaaagccgaa ttaggccctt accgcggatt gacgccgatg
     1021 cgcgcggacc aggcaaggtc ttgccactga tgaacactga tttcacctga tctgcacacg
     1081 cgagatgcgc cgattcaacc cgcggctata gtggctgcaa tacagaagtc cgggctaaag
     1141 agaaaggcag gttggcatgg ctcagggcgt gagaaatagc gaagccggga cagggcgaac
     1201 cggcggatga gcttcggaaa aagctcccgc ctgagcctcc cggtttccgg ttttctgtgc
     1261 tatcttgata aagacaagca gacattccac cactccccga cgtggcggta ccactcctca
     1321 gtagctcaat ggcagagcat ccggctgtta accggagggt tgtaggttcg agtcctacct
     1381 gaggagccat tctttttggg gccttggcgc gctgagggtt caacccctcg ccacccgtcc
     1441 tggcgctccc ttaattgttt tgttggattt acctgctcgc gaatagattg ctcaattctt
     1501 attcccgttt tgggaacatt aaagtttcta atctggtttg cgctcaagag cggaagggag
     1561 tacattaatg ctcggcctat atatcgcaga gcgatattat ctgataccga tattgatcgc
     1621 acggcgcata tatcttccgg gctttcgctc cgcaaagcgg ccggcgtgga gcgcggacct
     1681 cattgactgc cccaaaagcc agaggcccgt tgctgtggac cgataacaag gagcgcagac
     1741 catgagcacc acttacctgc cctcgaacgc atccaaagcg cggatcaggg aggctgaaaa
     1801 tgccagaaag aaccgtcttg aaatcgtgaa agcttactcc cacggtcaga tcagtcgccg
     1861 cgatctgatc aagtggggtc tcatcacctc cgcgggcgca ctggcgccga ttcacggact
     1921 caatcccttc gtcaaaagcg cgtacgcgga agatttcgat attcccaccg gcgcgccgcg
     1981 cagtccgctg tttggggctc agcccttcac gcagcccatg gcgcggtttg acgtgctgcc
     2041 gcgcaaccct gtcgcgtcac tcaatccggc gccgcaggcg caagctaacc agacgcagca
     2101 gaccgtcgat cccgcactcg gcggcggttt cggacctatt gaaggccgtc ctccgggccc
     2161 catctgggca caccagcagt tcacgcagct tccgccaaac gtcgccatct cggcgaccat
     2221 ggaaggagcc aaagccacta acatctacaa cccgggcgtt gcatcgaact tcaattccgg
     2281 cattgacgct gcagccacca tcaacccgcg gttccatccg ctgctgcccg atcaggggcc
     2341 gctcgcgcta tggacctaca acggcacgtt tcctcccaag ctgatgcaga tgcgctatgg
     2401 cgatcctgcg ctgttccggt tgagcaacaa gcttccgttt gacgtgcggc agaacggcgg
     2461 ctttggccgg cacaccattt caacgcacga acacaacggt caccacggcg cggaaaatga
     2521 cggattcacc ggcgcctatt tcttccccgg ccagttttac gactatcact atcccatcgt
     2581 tctggcgggc cgaaacagcg tgaacactga cgctactgat ccgcgagccg gcggaccgga
     2641 cgacaatggt ggaatcaaca agatcgcggg cgactggcac gagaccatga gcacgcactg
     2701 gttccacgac cacatgttct ccttcacctc ccagaacgtc tacaagggca ttgccggtat
     2761 gttcaatatc tacagtgctc tcgatcgtgg gaatgaggag atcaatgacg gcgtgaacct
     2821 gcgcctgccc agcggcacgc ttaagtcctg gggcaaccag gaatatgacg tgaacctgat
     2881 gctcgccgat aaagcgtggg gccaggacgg ccagctctat ttcgacatct tcgactttga
     2941 cgggttcctg ggcgatgcca tgacggtgaa cctgttctac aagccgttct ttgaagtgga
     3001 gcggcggaaa taccggttcc gcatccttaa cggcgcggtc tcgcgcttct tcaaagtcgc
     3061 aatcgcggat gcctccggca acgcacagcc gatgatcttc atcgccaatg acggcaatct
     3121 catgcccagc cccgtggtgc tcacccagct ggatgagcag ggaatcgcgg agcggtatga
     3181 cattgttgtc gatttttcga aatacaacat tggcgacaaa ctctggatgg tgaacctggc
     3241 ggaacaccag acaggcaaaa agccgtcagc ggacctcacg ctcgcccagg cgctctccgg
     3301 aacctcgcag gatccctgcg tgggtaagtt cctggaattc cgcatcgtgc gtgacccagc
     3361 caccccggat gtgagccagg ttccggcaac catgatcccc aatccggacc tcgccagtat
     3421 tcctgtgagc agagagcgga cgttcctgtt cggcagtggc ggcgcccaga atctcgacga
     3481 tccggttagc accttcttcg gacc
//
LOCUS       DASQYP010000179        16113 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_261805, whole genome shotgun sequence.
ACCESSION   DASQYP010000179 DASQYP010000000
VERSION     DASQYP010000179.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 16113)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16113)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16113
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_261805"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..984
                     /locus_tag="VE783_05725"
     CDS             <1..984
                     /locus_tag="VE783_05725"
                     /inference="COORDINATES: protein motif:HMM:NF016101.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016788 - hydrolase activity, acting on
                     ester bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alkaline phosphatase family protein"
                     /protein_id="HYX52930.1"
                     /translation="TSSFAMDGFAWVQGKFANNHTAPPENFQDVTGKRSMGFYDQTDL
                     PFYYFMASNFATSDRWFSPAPTRTHPNRFYWLAATSQGLVTPPPSQITQKTIFELMDQ
                     NNISWKIYSTDGNSYYFFFTYSNTHRANVVPLAQYFTDLQNGTLPQVAYIETGIEQGE
                     GGSVGVDEHPKSRVQSGAAFAANLINKLMQSPSWKDTVFIETFDEGGGFYDHVPPMPE
                     VSPDGIPPILGPTDIKGDFVQSGFRVPMIVISPFSKKNFVSHLPMDSTAALKMIETRF
                     KMPALTQRDASMPDMWQEFFDFSTTNGPWATPPNPPAQPDTLPCTFGVPAG"
     gene            1106..2299
                     /locus_tag="VE783_05730"
     CDS             1106..2299
                     /locus_tag="VE783_05730"
                     /inference="COORDINATES: protein motif:HMM:NF012656.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase"
                     /protein_id="HYX52931.1"
                     /translation="MDLNLSASELKFRDELRAWLTANVPKGWDARRDQTMEQRFDFLK
                     SWQRRMYEAGWAGISWPKEFGGRGASLMEQVIFWQELALAGAPPLANVLGVGLVGPTL
                     IAFGTEEQKKRYLTKILSAEEIWCQGFSEPDAGSDLANVRCEARLNPAGDHYVVNGQK
                     VWNSYGWAADWCQLVVRTDPTASKHRGITVLLVDMKLPGVDVRPLRQMTGETEFNEIF
                     FHDVQVPAANLVGKVNEGWEVAMGTLMHERGTLGAGIQVTYRRNMERLIELARQRERN
                     GRPAAQDPVIRQKLAQCYAEVEIMRWNQMRAFSRISATGVPGPEGSIQKIFWSELNQR
                     FQQIAQELLGPYGQLEAGDPLAIDDGAWSYGYLRARGNTIEAGTSEIQRNIIGHFVLG
                     LPKSY"
     gene            2390..2872
                     /locus_tag="VE783_05735"
     CDS             2390..2872
                     /locus_tag="VE783_05735"
                     /inference="COORDINATES: protein motif:HMM:NF012922.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0004427 - inorganic diphosphate
                     phosphatase activity [Evidence IEA];
                     GO_process: GO:0006796 - phosphate-containing compound
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="inorganic diphosphatase"
                     /protein_id="HYX52932.1"
                     /translation="MKVFIENEAGSPVKHNHNEKTLVLESTTTVSRPFLFPYGFVLNT
                     TADDGDNVDCYVLTGRKLRTGDIVECEAVGLMEQVEDGEIDHKVFARLVGEPGILLDE
                     GRKAAFADFAEHVFEHIPGKKMEVGRFLDRDAALEYVKQHEDKPAQCAGKNGLFQIDR
                     "
     gene            2928..4028
                     /locus_tag="VE783_05740"
     CDS             2928..4028
                     /locus_tag="VE783_05740"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012656.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HYX52933.1"
                     /translation="MEFGLSESQQILKDTARKFFAGECPMPEVRPLMETETAYDKALW
                     EKMAAQGFTGIIFAEEFGGMGLGVVELALLMEEAGYALLPGPLFSTIWAGSMMDACGS
                     EQQKQKYLPKICSGQTRGAVAFLETGTSWNLDDLKLSGSTGKLTGSKLFVCDAAIADF
                     LVVPCADGVYFVSSGASGLKITPMKGMDLTRKIYSVQFSNTPAEKLAGNLSSSARALE
                     MATVALTAELAGSMQRVLELTVGYAKTRKQFGKPIGSFQAVQHMCADMYLETESVRSS
                     AYYSAWALQENTADASVAVSIAKMYASDAARNTGNRGIQVHGGMGFTWENDVHLYYRR
                     AKASETMLGDATFHRERIAQLVVDGKSIGANL"
     gene            complement(4025..5500)
                     /locus_tag="VE783_05745"
     CDS             complement(4025..5500)
                     /locus_tag="VE783_05745"
                     /inference="COORDINATES: protein motif:HMM:NF015047.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0018580 - nitronate monooxygenase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nitronate monooxygenase"
                     /protein_id="HYX52934.1"
                     /translation="MDLPLIIQGGMGAGISGWALAREVSRLGQLGVVSGTALDQVLAR
                     RLQDGDPGGHFRFALDHFPFPVMAERVWQKYYVPGGKGPLEPYIRVEMHSLEGSRELY
                     ELCMVANFAEVFLAKHGHPNPVGINYLEKIQLPHLPSLYGATLAGVDYVLMGAGIPLR
                     IPGVLDALARHQTATYELYVTGQPRGEQTILRFDPQDFIEGTAPNLRRPAFLAIIASN
                     TLATTMVRKANGRVKGFIIEGPTAGGHNAPPRGKLQLNDLGEPIYGERDQVDLAAIRE
                     LGLPFWLAGEYGSPEKLQYALSEGAAGVQVGTAFAFCEESGLRADYKQQIIDLVKNGQ
                     ARVFTDRLASPTGFPFKVVQLEGTSSEQQVYEARPRICDLGYLRETYRKEDGSIDYRC
                     PGEPVSLYLAKGGNEADTVGRKCLCNALVANIGMGQVRNQKHHEPALITSGDDLKNIV
                     QFLASGKSSYTAADVVARLLERFPAEDKRVAAELAVCFAVC"
     gene            5634..7214
                     /locus_tag="VE783_05750"
     CDS             5634..7214
                     /locus_tag="VE783_05750"
                     /EC_number="2.1.1.148"
                     /inference="COORDINATES: protein motif:HMM:NF014560.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_function: GO:0050797 - thymidylate synthase (FAD)
                     activity [Evidence IEA];
                     GO_process: GO:0006231 - dTMP biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent thymidylate synthase"
                     /protein_id="HYX52935.1"
                     /translation="MPDPTLQSQAVPEMNGASSGPRVDVYAVHGVDPEVQAYAMAKYS
                     RSALSMRESLREISQQKAEQFLNTFYFQYGHRSIADLAHIAFAIEKLSMLAAIVLVDE
                     QRWDGQERSTRYQNFKKSGYYTPTFDGRTGAELRSRYVAAIDFLFSEYDALTQEMLRY
                     YTAQVPRPADLPEEAYTRTLRARAFDNSRYLLPLATNTSLGQIVNARTLENQIARLLS
                     SPYAEARHLGDLLKHAAKDPAYNVQSEWLRGLVQEIKAADPEIGKRAEEQLLRPVKIA
                     PTLVKYASPSEYEIRTREELAGAASDLMKGAPIQPAPLVDLIENEPLEIELASTLIYS
                     ACHYSYRQVRESISALSASQRGEIIDLGLRHRGKHDELLRQFHAGQQFKFDILMDIGG
                     FRDMHRHRRCTQIEQGFTSRHGYDTPEDIRRAGLAGRFESAMKKVLAEHEDFSSAGAS
                     EQALYLLPMGTLKRTLFKMDFAEALYISELRSGPAGHFSYRNVAYAMYEEVQKKHPAL
                     AQYFRVTDVREPVDLLKR"
     gene            7214..7420
                     /locus_tag="VE783_05755"
     CDS             7214..7420
                     /locus_tag="VE783_05755"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52936.1"
                     /translation="MSRPFWKRFTLAASAVILGNVLYLWIQRFLPPNAQHQAFRIDLG
                     LVADFWLCVVLYSVFMFLYNKSRH"
     gene            7593..9083
                     /locus_tag="VE783_05760"
     CDS             7593..9083
                     /locus_tag="VE783_05760"
                     /EC_number="2.7.7.65"
                     /inference="COORDINATES: protein motif:HMM:TIGR00254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009975 - cyclase activity [Evidence IEA];
                     GO_process: GO:0009966 - regulation of signal transduction
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="diguanylate cyclase"
                     /protein_id="HYX52937.1"
                     /translation="MQKIAILYDASQAVLSTFDLDEVLNQILTIIRDYFQLQNGVVLL
                     LDRNKSELYIRAQIGKSNFAPDLRVPVGQGLTGTAAKLKRPIYTPDVSKDSRYFGTVT
                     ETKSEVAIPLMVRDEVVGVLDFQSEHLNFFDAETIDLLTLFSTQASLALENARLYSLE
                     RRRAEQLEAINSVARKTTAVLDLDELLSVVCRLLLEWFRIDHVAVLLAEGESLRVRAF
                     QGQLTPNLAMGAQLGPGAGLAARALMTGRSVIENDVNSVDGYIAGFAETQSEMCVPLI
                     FFGEKLGVLVLDSARKNAFDPDDLQALESVADICAAAIQNASYFDRMKQLAYIDGLTG
                     IHNRRYFEMRFPEELERAARFQGRMSVIMVDIDHFKRLNDEFGHLLGDEVLRAVSGIF
                     KQHLRKMDVVCRYGGEEFAMLVLETSGENALRIAEKLRQRVAGHHFPGVPRSVTISCG
                     VADYPAHGITRDELVAAADAALYQAKQAGRNRVFSASTKREFTVSS"
     gene            9092..9790
                     /locus_tag="VE783_05765"
     CDS             9092..9790
                     /locus_tag="VE783_05765"
                     /inference="COORDINATES: protein motif:HMM:NF018894.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0035438 - cyclic-di-GMP binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PilZ domain-containing protein"
                     /protein_id="HYX52938.1"
                     /translation="MSASTAVIPGKVFARAASVHIDNACNAFLHDCFRQFGIHVVALP
                     GDPASLFNRQKFEACVLRLYDPDAERILKAARSSPSNKRMVIYGIARSSQEALKYSSY
                     GINAVFDEPLDRQSVLKVVRATHLLVIHELRRYVRIPVVSEVVLEIGSSVLKAATVEV
                     SSGGMSVKSATPLASSDTVNLRADLPGLPRLNVRAYICWTRPADKVYGLRFDPTDDRR
                     LKIRNWIDQYLEIV"
     gene            9837..10739
                     /locus_tag="VE783_05770"
     CDS             9837..10739
                     /locus_tag="VE783_05770"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HYX52939.1"
                     /translation="MQTIELSNVRKTYEHFVAVDGISFAIEQGTVFGLLGPNGAGKTS
                     TIRMMIGITQPDSGQINVFGKPFERKSLERIGYLPEERGLYKKMKVLDQLVFLAELHG
                     MSRSDAGAKAQQWCERLDIAEKLQSKVEELSKGMQQKIQFIAALLHEPDFVIMDEPFY
                     GLDPVNAGLLKDVLLDLKKQGKTILFSTHRMDQVEKLCDSICLIDRGRAVLQGPLSQV
                     KSKFGKNNVQIEYVGNDDFLHQTQLVGSYNNYGNYVEVRLAPGADSQELLRAVASRSR
                     VNKFELMEPSLEEIFKEVVGKTDA"
     gene            10732..12018
                     /locus_tag="VE783_05775"
     CDS             10732..12018
                     /locus_tag="VE783_05775"
                     /inference="COORDINATES: protein motif:HMM:NF024110.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HYX52940.1"
                     /translation="MRSMFLIARREYLERIHTKAFIVMTILIPAIMGGSLFLPALFMR
                     KTQSGVKHLVIVASDRHTAEVIADQINRDRQDDSRDKEQSTRRSAGAGANWAIDLDTN
                     TSEENRANLNLKVKAKVLDGVIWATDENLASKKVPFITRDVSSFEEIFDVQRSISRAL
                     QRHTLSAKGLSESDIENFQKPVDLTAVTPAGKPAGNAQSTIFTAIFQIMVLYMSVLLY
                     GVNVMNAVLEEKNSRVMEVVLSTVEPKFLMAGKILGVGAVGLTQIAIWVALGLFYSGS
                     AVVGSGLDLKSIISVRSIVFFVVFYLLGYLLYSAMYAAVGAMCNSQQEAQQLSQLVTL
                     PMIIPLFLIGYIVQYPGAPLSMAVSLFPLTAPLTMYARIVLQMPSWYELAGSIALLVA
                     TIYGVVLLCGKIYRVGILMYGKKPTLPEIVKWLKYA"
     gene            12028..12744
                     /locus_tag="VE783_05780"
     CDS             12028..12744
                     /locus_tag="VE783_05780"
                     /inference="COORDINATES: protein motif:HMM:NF015961.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysophospholipid acyltransferase family protein"
                     /protein_id="HYX52941.1"
                     /translation="MEPVAQAEQSEAPASDARVFSWRERLQLFLISWAGYLLIRLICP
                     TLRYSAVTEPGTIADLNGPYQASIFPFWHRCVIPASYKFRNLGIAVMTSKSFDGEYIA
                     RIIEKLGFRAVRGSSSRGGAAALLGMRRELEADHTVAFTIDGPRGPRYVAKPGPVLLA
                     KITGRPITCFYMHVERAWILNSWDQMMIPKPFSDVMVYATAPIYVPQDASDEQMKSFH
                     QQMQDALERARLGAATALRQ"
     gene            complement(12774..13934)
                     /locus_tag="VE783_05785"
     CDS             complement(12774..13934)
                     /locus_tag="VE783_05785"
                     /inference="COORDINATES: protein motif:HMM:NF013740.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:1905887 - autoinducer AI-2 transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HYX52942.1"
                     /translation="MSANRIIPPLPEKLRPTEAADQVEASELAKQQRSEHKFTQTVLA
                     GSGAQIVIALAVVLVIFYVAKLILVTLLVSVLIAFMLAPLVGLLEKIHLPRAAAALIA
                     VLLLSTACWGASYFFYYRALDFAHELPKYTEHIKGMLAHVREQTADLKKSTENILPED
                     AKAAKRAVPVKVENSGSSDVITNHLGTVTEVLLTLAFIPFLVYFMLSWQEHARRKTVE
                     LFRPEHRTVAYVTLGQIALMMRSFIAGNFIIGVFLSVASVIVFGFLGLQYFYFLGVLS
                     GFLSLMPYLGVVLAIIPPLAAGAGKLHEGGFIAILITVVGLHLFAMNVLYPKVLGKRL
                     QLNPLVVTIALLIWGWIWGAAGLILAIPIMGVIKIICDHVKPLRAVSEWMGE"
     gene            13971..14414
                     /gene="ruvX"
                     /locus_tag="VE783_05790"
     CDS             13971..14414
                     /gene="ruvX"
                     /locus_tag="VE783_05790"
                     /inference="COORDINATES: protein motif:HMM:NF015607.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction resolvase RuvX"
                     /protein_id="HYX52943.1"
                     /translation="MEAAGRILAIDYGSRRMGLAVTDPLGITAQGIETLERKNKRSDF
                     ARLERLLREYHVREIVLGYPLRMSGEEGRQTEKVNAFRAELESRFGLPVHLWDERLTS
                     AEANRILREAELSIRKRAAAVDRMAAVLILQSFLQSRSAQQSSPE"
     gene            14587..15579
                     /gene="mltG"
                     /locus_tag="VE783_05795"
     CDS             14587..15579
                     /gene="mltG"
                     /locus_tag="VE783_05795"
                     /inference="COORDINATES: protein motif:HMM:TIGR00247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008932 - lytic endotransglycosylase
                     activity [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0071555 - cell wall organization [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="endolytic transglycosylase MltG"
                     /protein_id="HYX52944.1"
                     /translation="MLKFLLRTFLIAVIVAAGLLAYAFWLPIGPRSQQFVQLKPGSSA
                     RHIGAELAKAGVVRSQYAFLLWHYVHGRKHLKAGEYSFDHPAKLREIYDRLAKGDIYV
                     HLLVVPEGYNMFDIAGAVEEAGLGTRDDFLKVARGDVSLIHDLDPQAPSLEGYLFPDS
                     YRFTRTQTLHDIASTMVHRFRQAAKEIGLSGDVHSLVTMASIVEKETAVPQERPEVAS
                     VFYNRMHKNMVLATDPTVIYAALLNNRYRGTIYRSDLQFDSPYNTYRNTGLPPGPICN
                     PGRDSLMAALHPADTQYLFFVSDNQGHHNFSRTPEEHARNVAAYRRSVAQSVNR"
     gene            15800..>16113
                     /locus_tag="VE783_05800"
     CDS             15800..>16113
                     /locus_tag="VE783_05800"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52945.1"
                     /translation="MSTAPLKEATLQQLIEVVNTSAAHLQTLNATVDIDASSGGERKG
                     KVTDYRQVSGYVLVRKPEMLRMILLAPVVRSRLVDMVSDGKKFELAITTPSQSKIYIG
                     SN"
BASE COUNT         3560 a         4587 c         4594 g         3372 t
ORIGIN      
        1 acttccagct tcgccatgga cggctttgcg tgggttcagg gtaagttcgc gaacaatcac
       61 accgcgcctc cggaaaattt ccaggatgtg accggcaagc gttccatggg cttctacgat
      121 cagacggatc tgcccttcta ctacttcatg gcgtcgaatt tcgccacgtc agatcgctgg
      181 ttctcgcccg cccctacgcg cacgcatccg aaccgctttt actggctggc tgcaacctcg
      241 cagggtctag tcacaccgcc acccagtcag atcacgcaaa agacgatttt cgaactgatg
      301 gaccagaaca acatcagttg gaagatttac tcgactgacg gcaacagcta ctacttcttt
      361 ttcacgtact cgaacacgca tcgcgccaac gtggtgccgc tggcgcaata tttcactgat
      421 ttgcagaacg gaacgctgcc gcaggtcgca tacatcgaga ctggaatcga acagggcgag
      481 ggaggttctg tgggcgtaga cgagcatccc aagagccgcg tgcagagcgg tgcagcattt
      541 gcggccaacc tgatcaacaa gctcatgcag agcccgtcat ggaaagacac tgtctttatc
      601 gaaaccttcg acgaaggcgg cggattctat gatcacgtgc cacccatgcc tgaagtgagc
      661 ccggatggaa taccaccgat cctcggccca actgacatca agggcgactt cgttcaaagt
      721 ggcttccgcg tgcccatgat tgtcatctcg ccattttcga agaaaaattt cgtctctcat
      781 ctgcccatgg attccactgc ggcgctgaag atgattgaga ccagattcaa aatgcctgcg
      841 ctcacgcagc gtgatgcctc catgccggac atgtggcagg aattctttga cttctccacc
      901 accaacggcc cttgggccac accacctaac ccaccggcac agccggatac acttccctgc
      961 actttcgggg ttcctgcggg ataaaccttc cagcatagaa gctcttcagc gccgcctgtt
     1021 cgcggcgctt tctttttgtc gggctgattc gcttcagtaa aagccgcaga tgtaaactgt
     1081 tcgcgccttt ctccaaggag tcttcatgga cctgaatctc agcgcgtcag aactgaagtt
     1141 tcgcgatgaa ctccgtgcct ggctcacagc caacgttccc aaaggctggg atgctcgtcg
     1201 tgaccagacg atggagcaac gcttcgactt cctcaaatcc tggcagcgac ggatgtatga
     1261 agcgggttgg gcaggcatct catggcccaa agaatttggt ggacgcggcg ccagcctgat
     1321 ggagcaggtc atcttctggc aggagctggc gctggcgggc gcgccgcctc tggcgaacgt
     1381 gctcggtgtc gggctggttg gaccaacact gatcgcattc ggtaccgaag agcagaagaa
     1441 gcgctatctc accaaaatcc tcagtgcgga agaaatctgg tgtcagggct tctccgaacc
     1501 cgatgcaggt tctgatcttg ccaacgtccg ctgtgaggcg cggctgaacc cagcaggcga
     1561 tcactacgtg gtgaacggtc agaaagtctg gaacagttat ggctgggccg cagactggtg
     1621 ccagttggtc gtgcgcactg atcccacagc ttccaagcat cgcggtatca ccgtgctgct
     1681 ggtggacatg aaattgcccg gtgttgacgt gcgcccgctg cgccagatga ccggcgagac
     1741 agagttcaac gaaatcttct ttcatgacgt tcaagtgccg gcggcaaatc tcgtcggaaa
     1801 agtgaatgag ggctgggaag tggcgatggg cacgctcatg cacgagcgag gcacgctcgg
     1861 cgccggcatt caggtcacgt atcgtcgcaa tatggaacgg ctgattgaac tcgcccgcca
     1921 gcgtgagcgc aatggccggc cagcagcgca ggaccccgtg atccggcaga agctggcgca
     1981 gtgttacgcg gaagtcgaaa tcatgcgctg gaaccagatg cgtgctttca gccgcatcag
     2041 cgccaccggt gttcccggcc ctgaaggctc cattcaaaag atcttctgga gcgaactcaa
     2101 ccagcgcttc cagcagatcg cacaggagtt gctggggcct tatggacagc ttgaggccgg
     2161 tgatccgctg gccatcgatg atggcgcgtg gtcttacggc tatctccgcg cccgtggcaa
     2221 tacgattgaa gcaggaacgt cagagattca gcggaacatt atcggacatt ttgtgctggg
     2281 gctgccgaag agctactaaa caagctgcta gctgctggct tccagcaact gggcaaaaaa
     2341 catcaccagg actcgacgcc cacaacggag tcacagacac ggagaaagcg tgaaggtttt
     2401 tattgagaac gaggcgggat cgccggtcaa gcacaaccat aacgagaaga ctcttgtact
     2461 cgagtccacc accacagttt cacgaccatt tttgtttcct tacgggttcg tgctgaatac
     2521 gacggccgac gatggcgaca acgtcgactg ctacgtactc acggggagga aactgcgaac
     2581 cggagacatt gttgaatgtg aagctgtggg tttgatggag caagttgagg atggagaaat
     2641 tgaccacaag gtgttcgcgc gtttggttgg cgagccggga atactgctcg atgaaggacg
     2701 caaagcggca ttcgcggatt tcgcggaaca cgtctttgag catattcctg gcaaaaaaat
     2761 ggaagttgga cgatttctgg accgagatgc agctttggaa tatgtgaaac agcatgagga
     2821 caaaccggca cagtgtgccg ggaagaacgg tctttttcag atcgatcgct gaacggtttg
     2881 taccgtgttt tgcgtaggtt gtgagctcgg atggaaaagg gattcaaatg gaatttggac
     2941 ttagcgaaag ccagcaaatc ttgaaagaca cggcccgcaa attcttcgcg ggcgagtgcc
     3001 cgatgcccga agtgcgaccg ctgatggaaa ccgagacggc gtacgacaag gctctttggg
     3061 aaaaaatggc ggctcagggc ttcaccggaa tcatctttgc tgaagagttc ggcgggatgg
     3121 gacttggtgt ggtggagctt gcgctattga tggaagaagc cggatacgcc ctgcttcccg
     3181 ggccattgtt ctcgaccatc tgggccggat caatgatgga cgcttgcggc agtgagcaac
     3241 agaagcagaa atacctgccg aaaatctgca gcgggcagac gcgcggcgca gttgcttttc
     3301 tggagaccgg cacaagctgg aatctcgatg atctgaaact ctccggcagc accggcaaac
     3361 tcaccggaag caaactgttc gtctgtgacg cggcaattgc cgatttcctc gtggtgcctt
     3421 gtgctgacgg tgtttacttc gtcagttcgg gcgcttccgg gctgaaaatc acgccgatga
     3481 agggcatgga tctaacgcgc aagatttact ccgtgcagtt cagcaacacc ccggctgaaa
     3541 agctcgccgg taatctttcc agcagcgctc gcgctcttga gatggcgacg gttgcactta
     3601 cggccgaact cgccggcagc atgcagcgtg tgcttgaact tacggtgggc tatgcaaaga
     3661 cacgcaaaca gttcggcaag ccgatcggca gtttccaggc agtgcagcac atgtgcgcgg
     3721 acatgtatct ggaaaccgag agcgtccgtt cgtctgcgta ttattcagcc tgggcgcttc
     3781 aggaaaatac agccgacgca tcggtcgcag tttcaatcgc caagatgtat gcaagcgacg
     3841 cggccagaaa tacaggcaat cgcggcattc aggtgcacgg cggtatgggc ttcacctggg
     3901 agaatgacgt tcatctttac tacaggcgcg ccaaggcaag cgagaccatg ctgggcgatg
     3961 cgacgtttca tcgcgagcga atcgcgcaat tggtggtcga cggtaaaagc attggcgcta
     4021 atctctaaca cactgcgaaa cacactgcga gttcagcggc aacgcgcttg tcctcggccg
     4081 ggaatctttc aagcagtcgc gcgaccacat ccgcagccgt ataggaactc ttgcctgacg
     4141 ccaggaactg gacgatattc ttgagatcgt cacctgaggt gatcagcgcc ggctcatgat
     4201 gcttctggtt ccttacctgc cccatcccga tgttggcgac gagcgcattg cataggcatt
     4261 tcctgcccac tgtgtcagct tcgttgccgc cttttgccag ataaagcgaa accggctcgc
     4321 ccggacagcg ataatcaatg ctgccatcct ccttacgata agtctcgcga aggtagccga
     4381 gatcacagat gcgtggacga gcttcataaa cctgttgctc agacgaagta ccctcaagct
     4441 gtacaacttt gaaaggaaat ccggttggcg aagccagccg gtccgtgaag acccgcgctt
     4501 ggccattctt tacaaggtcg ataatctgct gtttgtaatc ggcgcgcaga cccgattcct
     4561 cacagaaggc aaaggcagtc cccacctgaa ctcctgctgc gccttcagac aacgcatact
     4621 gcagcttctc cggcgatcca tattctccgg ccagccagaa aggcagcccg agttcgcgga
     4681 tggccgccaa atcaacctgg tcacgctctc cataaatggg ctcgcccaaa tcattcaact
     4741 gcagcttgcc gcgcggtggt gcgttgtgcc cgcctgcggt ggggccctca atgatgaagc
     4801 ccttcacgcg accattcgcc ttccggacca tggttgtagc cagggtgttc gaagcaataa
     4861 tcgcaagaaa agccggccgc cgcagattcg gagcggtacc ctcaataaaa tcctgcggat
     4921 cgaatctaag aatggtctgt tcgcctcgtg gctgtccggt cacgtaaagc tcgtaagttg
     4981 cggtctggtg ccgggctaga gcatccaaaa cgcccggaat cctcaaggga atgccagcgc
     5041 ccatcaggac ataatccact ccagccagcg tggcgccgta aagcgacggc aagtggggca
     5101 gctgaatctt ttccagatag ttgataccca ccggattggg gtgaccatgt ttcgcaagga
     5161 agacctcagc gaagttcgcc accatgcaga gctcataaag ctcgcgcgag ccctcaagtg
     5221 agtgcatctc gacccggata taaggttcaa gcgggccttt gccgccgggt acgtaatatt
     5281 tctgccagac tcgctcggcc atcacaggaa aagggaaatg atccagggca aagcggaaat
     5341 gacctccggg atcgccatcc tgaaggcggc gcgccagaac ctgatctaac gctgttcctg
     5401 aaaccacgcc gagctgtcca agccgggaaa cctctcgagc cagcgcccag ccggagatgc
     5461 ccgcacccat gccgccctga attattaagg gaagatccat agccgctatt gtggcccgca
     5521 tctgggcagt gccaatgtca gagttgcgta atttcaaatc gtgatggccg tcacagtttt
     5581 tgagcggttc ttttaagcga attccacagc cctgatgaac tagaatcctc atcatgcccg
     5641 atccaaccct gcaaagccag gctgttccgg aaatgaacgg ggccagttcc ggcccgcggg
     5701 tggatgttta tgcggtgcac ggcgttgacc ctgaggtgca ggcgtatgcc atggctaaat
     5761 attctcgctc cgcactctcc atgcgggaat cgctccgcga gatcagccag cagaaggccg
     5821 agcagttcct caacactttt tattttcagt acgggcatcg ctccatcgcc gatctggcgc
     5881 acatcgcttt cgcgattgaa aagctttcga tgcttgcggc cattgtgttg gtcgatgagc
     5941 agcgctggga cgggcaggag cgctccaccc gttatcagaa cttcaaaaag agcggctatt
     6001 acactcccac attcgatggg cggacaggcg cagagttgcg cagccggtac gttgccgcga
     6061 tcgattttct cttcagcgaa tacgacgcgc tgacgcagga aatgttgcgt tactacacgg
     6121 cgcaagtgcc gcgtcccgca gacctgccgg aagaggcata cacgcgtacg ctgagagctc
     6181 gggcttttga caattcgcgc tacctgctcc cgctggctac gaacacctcc ctgggacaga
     6241 tcgtgaacgc gcgcacgctg gagaaccaga ttgcgcgact actgtccagt ccttacgcgg
     6301 aggcgcggca cctgggcgac ctgctgaagc acgcggcaaa agatccggct tataacgttc
     6361 aaagcgaatg gctgcgcggc ctggtgcagg aaatcaaagc ggctgaccca gagattggaa
     6421 aacgagctga agagcagctg ctgcgccctg tcaaaatcgc acccacactg gtgaaatatg
     6481 ccagcccgag cgagtacgaa atcagaaccc gcgaggaact ggcgggggcg gcgagtgacc
     6541 tgatgaaggg agctccgatt cagcccgcgc ctctggtgga cctgatcgaa aatgagccgc
     6601 tggaaatcga gctcgcgagc acgctgatct attcggcctg ccattactcg tatcggcagg
     6661 tacgggaaag tatctccgcg ctcagcgctt ctcaacgcgg cgaaatcatc gacctcggac
     6721 tgcgccatcg cggcaagcat gacgaactcc tgcgccagtt ccacgccggg cagcagttca
     6781 agttcgacat ccttatggat attggcggct ttcgcgacat gcaccgccat cgccgctgca
     6841 cgcagattga acagggattc acgtccaggc acggctatga cactcctgaa gacataagac
     6901 gtgccggtct cgccggccgg ttcgaatcgg ccatgaaaaa agtccttgcc gaacatgagg
     6961 atttctcttc cgctggcgct tctgagcagg cgctctacct gcttcccatg ggcactttga
     7021 agcgcacgct cttcaaaatg gattttgcag aagctcttta catctccgag ctgcgcagcg
     7081 gcccggcggg gcacttctct taccggaacg tggcttacgc catgtatgag gaagtacaga
     7141 agaagcatcc cgctctggcg cagtatttcc gcgttacaga cgtgcgggaa cccgtggact
     7201 tgctcaaaag gtaatgtcgc ggccgttctg gaaacggttc accctggcgg cgtctgcggt
     7261 catcctgggg aacgtgctct atctttggat tcagcgcttc cttccaccca acgcgcagca
     7321 tcaggcgttc cggattgacc tgggactggt ggccgatttc tggctctgcg tggttctcta
     7381 tagcgtattt atgtttcttt acaacaaatc aaggcactag gtacttccgt gctgccctct
     7441 gttgtccgtt cagagctttt ccacggtaga atcaaagaca ataagccatc tgagctcgcc
     7501 ccctccggcg agaaagaact gcagtccaag ccgggagctt cacaaggccg taaatctccg
     7561 tccaggggac gccatttcac ttgctggaat cgatgcaaaa gatcgccata ctttatgacg
     7621 ccagtcaggc ggtcctctcg acttttgacc tggacgaggt tctcaaccag atactcacga
     7681 tcattcggga ctatttccag ctgcagaacg gcgttgtcct gctactcgac aggaacaagt
     7741 cagagcttta catccgggcc cagatcggca aaagcaattt tgctccggac ctgcgtgttc
     7801 cagtgggcca gggccttacc ggaacagctg ccaagctgaa acggcccatc tacacgcctg
     7861 acgtaagcaa ggattcccgc tattttggga ccgtgactga gaccaagtca gaagttgcga
     7921 ttccgctcat ggtccgcgac gaagtcgttg gtgtgctcga cttccagagc gagcacctga
     7981 acttctttga cgccgaaacc atcgatctgc tgacgctctt ctccacacag gcatctcttg
     8041 ccctggaaaa cgctcggctg tactcgctgg agcggcgccg agccgaacaa ctggaagcca
     8101 ttaactccgt cgcccggaag accacggcgg ttcttgacct ggacgaactg ctatcagtcg
     8161 tttgccgctt gttgctggag tggtttcgga ttgaccacgt ggcggtgctg ctggcggaag
     8221 gtgaatcgct gcgcgtccgc gcattccagg gccagttaac gcccaatctg gcgatgggag
     8281 cgcagcttgg tccgggagcc ggcctggctg cccgtgctct tatgacgggg cggagcgtaa
     8341 ttgaaaatga cgtgaacagc gtcgatgggt acattgccgg atttgccgag actcagtcag
     8401 agatgtgcgt gcccttgatc ttcttcggcg aaaagctagg tgtgctggtt ttggacagcg
     8461 cgcgtaaaaa cgccttcgat cccgacgacc tgcaggcgct ggaatcggtg gccgatatct
     8521 gcgcggctgc catccagaat gccagctatt tcgaccgcat gaagcagctt gcgtacattg
     8581 acgggctcac gggcatccat aaccggcgct atttcgaaat gcgctttcct gaagagcttg
     8641 aacgcgccgc acgctttcag ggccgcatgt cagtaatcat ggtggatatt gaccacttca
     8701 agcggctgaa cgatgaattc gggcacctgc tgggcgatga agtgctccgg gcagtctccg
     8761 gaattttcaa acagcacctg cgcaaaatgg acgtggtatg ccgttacggg ggcgaggaat
     8821 ttgccatgct ggttctggaa accagcggtg agaacgctct gcgcattgcg gaaaagcttc
     8881 gccagcgcgt ggccggccac catttcccgg gcgtgccgcg atctgtgaca atcagttgcg
     8941 gcgtggcgga ctaccccgca catggaatta ccagagacga attagttgcc gcggccgatg
     9001 cagcccttta ccaggccaaa caggcgggtc ggaatcgcgt gttctcagcc agcacgaaac
     9061 gggaatttac agttagcagt taacagagtc gatgagcgcc tccacagccg tcatcccggg
     9121 gaaggtcttc gcgcgtgcag ccagcgtgca cattgataat gcgtgcaatg cgtttttgca
     9181 cgactgcttc cgacaattcg gcattcatgt ggtggcgttg cccggtgatc cagcaagttt
     9241 attcaaccgg cagaaatttg aggcctgcgt tctgcggctc tatgatcctg acgccgagcg
     9301 catccttaag gcggcccgca gctcgccttc caacaagcgc atggtgatat acgggatcgc
     9361 gcgcagcagc caggaggcac tcaagtattc aagttacggc atcaacgccg tctttgatga
     9421 gccgctggac cgccaaagcg tgttgaaggt ggtgagggcc actcatctgc tggtcatcca
     9481 cgagctgcgc cgctacgtgc gcatacccgt ggtgagcgaa gtagtgctgg agatcggctc
     9541 cagcgtcttg aaggccgcca cagttgaggt aagttccggt ggcatgtcag tcaagtcagc
     9601 cactcctctc gcctcgtcag acacagttaa tctcagagcg gatcttcccg gccttcccag
     9661 gcttaacgtg cgcgcttaca tctgctggac ccggcctgcc gacaaggttt acgggctgcg
     9721 gtttgatccc acggacgacc ggcggttgaa aatccgcaac tggatcgacc agtaccttga
     9781 gattgtgtaa ctttgccctt cactccgcgt atcattgttt tggagcccat ctccgcatgc
     9841 aaaccattga attgagtaat gtccgcaaga cgtacgaaca ctttgtggct gtggacggca
     9901 tctccttcgc gattgagcaa gggacggtct tcggcctgct gggcccgaac ggcgccggca
     9961 aaaccagcac catccgcatg atgatcggga tcacccagcc tgattccggc cagattaacg
    10021 tcttcggaaa gccttttgaa cgcaagagcc tggaacggat cggctatctg ccggaagagc
    10081 gcggcctcta taaaaaaatg aaagtccttg accagctcgt ttttctggcc gagctccacg
    10141 gcatgagccg gagtgacgca ggcgcaaagg cgcagcaatg gtgcgagcgg ctggacattg
    10201 cggaaaaact gcaaagcaag gtggaagagc tttccaaggg catgcagcaa aaaattcagt
    10261 tcattgcggc cctgctgcat gagccggact tcgtgattat ggacgagccc ttttacggcc
    10321 ttgatccggt gaatgcaggg ctgctcaaag acgttctgct ggacctgaaa aagcagggca
    10381 aaacgatcct gttctccact caccgcatgg accaggtgga aaaattgtgc gattcaatct
    10441 gcctcattga tcgtggccgc gcggtcttgc agggccctct ttcgcaggtg aaatcgaagt
    10501 ttgggaagaa caacgtgcag atcgagtatg tggggaatga tgactttctg caccagaccc
    10561 aactggtggg ctcctacaac aattacggca actatgttga agtccggctg gctccgggcg
    10621 cggactcgca ggaactgctg cgcgcggtag cttcacggtc gcgggtaaac aagttcgagt
    10681 taatggagcc ttcgctggaa gaaattttca aggaagtggt gggtaaaacc gatgcgtagc
    10741 atgttcctga tcgcccggcg tgagtacctt gagcgcatcc acaccaaggc attcatcgtc
    10801 atgaccatcc tgatccccgc gatcatgggc ggttctctgt ttcttccggc cctcttcatg
    10861 aggaagaccc agtctggcgt gaaacatctg gtgatcgtcg cgtctgaccg ccacacagcc
    10921 gaggtcattg ccgatcagat caatcgtgat cggcaggatg acagccgtga caaggaacag
    10981 tccacgcggc gcagcgcggg agccggagcg aactgggcca ttgacctgga caccaacact
    11041 tcagaggaga accgcgcaaa tctgaatctc aaggttaagg ccaaagttct tgacggtgtt
    11101 atctgggcaa ccgacgaaaa cctggcgtca aagaaagtcc catttatcac ccgcgacgtt
    11161 tccagcttcg aagagatttt cgatgtgcag agaagcatct ctcgagcctt gcagcgccac
    11221 acgctttccg ccaagggcct gagcgaatct gacattgaga acttccagaa gccggtggat
    11281 ttaactgccg tgacacctgc aggcaagccg gccggtaacg cccaaagcac gatctttacc
    11341 gccattttcc agattatggt cctctacatg agcgtgcttc tctacggcgt aaacgtgatg
    11401 aatgccgtgc tggaagagaa gaactctcgt gtcatggagg tggtgctctc cacggtggaa
    11461 cctaaatttc tcatggctgg caagatcctg ggtgtgggag ccgttggcct tacgcagatc
    11521 gccatctggg tcgcgctggg gttgttctat tccggctcgg cggtagtggg cagcgggctg
    11581 gatctgaaaa gcattatcag tgttcgaagc atcgtcttct ttgtagtttt ttacctgctc
    11641 ggatacctgc tttacagcgc catgtacgcg gcagttgggg caatgtgcaa ttcccagcag
    11701 gaggcgcagc agctttccca gcttgtgact ttgcccatga tcattcccct cttcctgatc
    11761 ggttacatcg ttcagtatcc aggggctcct ctttccatgg cggtctccct gtttcccctt
    11821 acagcgccgc tcaccatgta tgcgcgcatt gtgctgcaaa tgccgtcatg gtatgagctt
    11881 gcgggctcga ttgctctact ggtggcaacc atctacggtg tggtcctgct ctgcggcaag
    11941 atataccggg tcggcatact gatgtacggc aagaaaccga ccttgccgga aatcgtgaag
    12001 tggctgaaat acgcttagaa tctcaccatg gagcctgtag cccaggcgga gcagagcgag
    12061 gcgccagcca gtgacgctcg cgtcttttcc tggcgtgagc gcttgcagct atttctcatt
    12121 tcatgggccg gctacctgct gattcgcctg atctgtccca cgctgcgcta cagcgccgta
    12181 accgaacccg ggaccattgc cgatcttaac ggtccatacc aggcctccat ctttcccttt
    12241 tggcaccgtt gcgtgattcc ggcgtcatac aaattccgca atctcggcat cgcagtgatg
    12301 acgagcaaga gctttgacgg tgagtacatt gcccgcatca tcgagaagct cggctttcgc
    12361 gccgtgcgcg gttccagttc acgaggcgga gccgcggccc tgctgggcat gcgccgggaa
    12421 ctcgaggcag atcacacggt ggcgttcacc atcgacggac cgcgcgggcc gcgatacgtg
    12481 gcgaagcctg gcccggtgct gctggcgaag atcacggggc gcccgattac ctgcttttac
    12541 atgcacgttg agcgagcctg gattctgaac tcctgggacc agatgatgat tcccaaacca
    12601 ttctctgacg taatggttta cgccaccgcg cccatttacg tcccgcagga tgcgagtgac
    12661 gaacagatga agagtttcca ccagcagatg caggacgctc tggagcgggc cagactcggc
    12721 gcagcgacgg cgctccgtca atagcagcca gcctccgccc ggggaaagcg gtactactct
    12781 cccatccatt cgctcacagc gcggagtggt ttcacgtgat cgcagatgat cttgatcacg
    12841 cccatgatag gaatcgcgag gatcagtccg gcagcgcccc agatccatcc ccagatcagc
    12901 agggcgatcg taaccaccag cgggtttaac tgcaggcgct tgcccagcac cttgggatac
    12961 aagacgttca tggcgaacaa atgcaggcca accaccgtga tcagaatggc gatgaagccg
    13021 ccttcgtgca gctttcccgc gcccgcagcc aggggtggaa ttatggcgag gaccacgccg
    13081 agatagggca taaggctcag gaacccgctc aacacgccga ggaaatagaa atattgaagt
    13141 cccaggaagc cgaacacgat cacgctggca acgctcagga acacgccaat gatgaaattg
    13201 ccggcgatga agctgcgcat catcagcgcg atctgcccaa gagtgacgta tgcgacggtt
    13261 cgatgctcag gccggaagag ctccaccgtc ttgcgtcgcg cgtgctcctg ccagctcagc
    13321 atgaagtaga cgaggaacgg aatgaaggcg agtgtcagca agacttcagt gactgtccca
    13381 agatgattgg taatcacgtc agagctgccg ctattttcca ccttcacggg aacggcacgt
    13441 ttggccgctt tagcgtcttc aggaagtatg ttctctgtcg acttcttcaa gtcggcggtc
    13501 tgctcccgaa cgtgcgccag catgcctttg atgtgttcgg tatatttagg cagctcgtga
    13561 gcgaaatcaa gggcacggta gtaaaagaag tagctcgccc cccaacacgc cgtcgagagc
    13621 agcagcactg caatgagggc ggcagcagcc cgaggcagat gaatcttctc caataacccg
    13681 accagcggtg ccagcatgaa ggcaatcagg acggagacga gcagggtgac caggatgagc
    13741 ttggctacgt aaaaaatgac cagcaccact gcaagggcga tgacaatctg cgcgcctgat
    13801 ccggcgagca ccgtctgggt gaacttgtgc tcgctccgct gctgtttcgc cagctcagag
    13861 gcttctacct gatcggcggc ttcagtgggc ctgagcttct caggcaaggg cggaatgatg
    13921 cggttggcag acacaaaggg taagatgcgt ccgctgctta taatgacgag gtggaagctg
    13981 ccggtcgcat actggccatt gattacggct ctcgccgcat gggtctggcg gtaactgatc
    14041 cgctgggcat caccgcccag ggaattgaga cgctggagcg gaaaaataag cgcagtgact
    14101 tcgcccggtt ggagcggctt ctccgcgagt atcacgtgcg tgagatcgtg cttggatatc
    14161 ccttacgcat gagcggcgaa gaaggccgcc aaaccgaaaa ggtcaacgca ttccgggctg
    14221 aattggagag ccggtttggc cttccagtgc acctgtggga tgagcgactc acctccgctg
    14281 aagcgaaccg catcctgcgc gaggcagagc tgagcatccg gaagcgcgcc gcagccgtag
    14341 accgcatggc cgcggtcctg atcctgcaat catttcttca atcccgcagt gcgcaacaga
    14401 gctcgccgga gtagccgctg gtcctgcgtg tacggccaac ttggccgcgg tatgctgctt
    14461 ccaatcaata cttcttagcc gcaggtgcat gtccccgctg cgctccggcc ttgtacttgc
    14521 gaggtcttcg cctgaacgat cgccggagag agacgcgggt acaatggagc catccggaac
    14581 agacttatgc tgaagtttct gctgagaacg tttttgatcg cggtgatcgt tgcggccggg
    14641 ctgctagcct acgcgttctg gctgccgatt gggccgcgct cgcagcaatt cgttcagctc
    14701 aagcccggat cgtcggcgcg tcacattgga gcggaactgg cgaaggctgg tgtagtccgc
    14761 agccagtatg cttttcttct ctggcattac gtgcatggcc gcaagcacct gaaagccggc
    14821 gaatactctt tcgaccaccc ggcaaagctg cgcgagatct atgaccggct cgcgaagggt
    14881 gatatctacg tccaccttct ggtcgtcccg gaaggctaca acatgtttga catcgcgggt
    14941 gcggtggaag aagcgggact tgggactcgc gacgacttcc tgaaggtcgc gcgcggagac
    15001 gtttccctca tccacgactt ggatcctcaa gcgccgagcc tggagggcta cctcttcccg
    15061 gatagctacc ggttcacccg cacccagacg ctgcatgaca ttgcgtcaac catggtgcat
    15121 cgtttccggc aggcagccaa ggaaatcggg ctgagcggcg atgtgcacag cctggtcacg
    15181 atggccagca tcgtggagaa ggaaacggcc gtaccgcagg agcggccgga agtggccagc
    15241 gtcttctaca accgcatgca caagaacatg gtcctggcga ccgatcccac tgtgatttat
    15301 gccgccctgc tgaataaccg ctaccgggga accatctacc gctctgacct tcagttcgac
    15361 tcgccctaca acacctacag gaacacaggc ctgccgccgg gtcccatctg caatcccggc
    15421 cgcgactccc tcatggccgc actgcacccg gccgatacac agtacctgtt cttcgtgagt
    15481 gacaaccagg gccaccacaa cttctctcgc acgccggaag agcacgcccg caacgtggcg
    15541 gcttaccgcc ggtcggtggc gcaatcggtc aaccggtagt ccccaaatac agtcattgcc
    15601 gtactttgcc ggtgtttgtc actggttgga aacccccagc cgataactcc cttccgatat
    15661 acttagaacg tattcgaaag aagcggaagt tatcaggtaa atgcgcgttt tactaagact
    15721 taacgtcctc attcttattt tcggcagttt actattgagt ggttgcgcgg tccgcgggca
    15781 acgcgagacc aaataccgcg tgagcactgc tccgcttaag gaagccacgc tccagcaatt
    15841 gatcgaggtg gtgaatacca gcgccgcgca tctgcaaacc cttaacgcga cagtagatat
    15901 tgacgcctct tcgggaggcg agcgcaaagg caaagtcacc gattatcggc aggtgagcgg
    15961 ctatgttctg gtgcgcaaac ccgagatgct gcggatgatc ctgctggctc cggtcgtgcg
    16021 cagcaggctt gtcgatatgg tgagcgatgg caagaagttc gagctggcca tcaccacgcc
    16081 cagccagagc aagatctata tcggctcaaa tca
//
LOCUS       DASQYP010000180        11692 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_49051, whole genome shotgun sequence.
ACCESSION   DASQYP010000180 DASQYP010000000
VERSION     DASQYP010000180.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 11692)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11692)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11692
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_49051"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..982
                     /gene="gcvT"
                     /locus_tag="VE783_05805"
     CDS             <1..982
                     /gene="gcvT"
                     /locus_tag="VE783_05805"
                     /EC_number="2.1.2.10"
                     /inference="COORDINATES: protein motif:HMM:NF001567.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004047 - aminomethyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0019464 - glycine decarboxylation via
                     glycine cleavage system [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="glycine cleavage system aminomethyltransferase
                     GcvT"
                     /protein_id="HYX52946.1"
                     /translation="VGMFDVSHMGDILIRGPQALEATQWISMNDASKLQQNQAHYSAL
                     LYPEGGFVDDVIVHKLGQNDYLLVINAGTREKDHSWVKKNVSRFRCHADDVGDYYTQI
                     AIQGPRAEATLQKLTDVDLSQIKNYWFKHGTVCGLPNTMIARTGYTAEDGFEIYVPSD
                     VATSERVWNEATEAGKEFGIVPCGLGARNTLRLEGRMALYGHEISDSINVWEAGLDRF
                     CKMEKPDFIGKAALEKAKAEGPKRTLVGLEAIDRGIPRDGYKVFDSTEQEIGYVTSGS
                     YAPFLKKNIALAYVPPSQSELGHEVFVEIRGQKVKCKVVPTPFYKRPKKA"
     gene            1013..1396
                     /gene="gcvH"
                     /locus_tag="VE783_05810"
     CDS             1013..1396
                     /gene="gcvH"
                     /locus_tag="VE783_05810"
                     /inference="COORDINATES: protein motif:HMM:NF002270.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0019464 - glycine decarboxylation via
                     glycine cleavage system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycine cleavage system protein GcvH"
                     /protein_id="HYX52947.1"
                     /translation="MAYPKDYKYTKEHEWIQISGKTGLVGITDHAQESLGDIVFVELP
                     KLGAKLQLGKSFGTVESVKAVSELYAPASGTVTEVNESLNQAPEDINKDAHKAWMVKI
                     ELSDPDETNVLLSADDYEKYVAEEK"
     gene            1554..2879
                     /gene="gcvPA"
                     /locus_tag="VE783_05815"
     CDS             1554..2879
                     /gene="gcvPA"
                     /locus_tag="VE783_05815"
                     /EC_number="1.4.4.2"
                     /inference="COORDINATES: protein motif:HMM:NF001696.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004375 - glycine dehydrogenase
                     (decarboxylating) activity [Evidence IEA];
                     GO_process: GO:0006546 - glycine catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminomethyl-transferring glycine dehydrogenase
                     subunit GcvPA"
                     /protein_id="HYX52948.1"
                     /translation="MRYLPKSPADRQQMLREIGSKTIDDLFEPIPAEYRLKRDLNVPR
                     QMAESEVIEFFHQCAATNAARYALFIGAGAYHHYRPVVIDSLISRGEFFTAYTPYQPE
                     IAQGTLQAIFEFQTMICELTGMEVANASMYDASTGTAEAMLMMVRLTGKNSVVVARTA
                     HPEYREVIKTYTQHQGLPIAECGYKEDGRLDLSDLEKKITDDTAGVLIQSPNFFGTIE
                     DVAAIADLVHRKGALLTVAISEALSLGAVKPPTEADIVAMESQSFGVPLGYGGPYAGV
                     LATKEKYVRQIPGRLVGETRDRNGKRGFVLTLSTREQHIRREKATSNICTNQALIATM
                     ATIYMTIYGREGLKELAQQNLAKAAYAAAEFSKKAKVLFAGSPRFNEFVVQTKEDSYE
                     INSRLLEKKIIGGFPLKKFYPELGNAALWCCTEMNTKEQIDAAVQAVGQ"
     gene            2876..4387
                     /gene="gcvPB"
                     /locus_tag="VE783_05820"
     CDS             2876..4387
                     /gene="gcvPB"
                     /locus_tag="VE783_05820"
                     /EC_number="1.4.4.2"
                     /inference="COORDINATES: protein motif:HMM:NF003346.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004375 - glycine dehydrogenase
                     (decarboxylating) activity [Evidence IEA];
                     GO_process: GO:0006546 - glycine catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminomethyl-transferring glycine dehydrogenase
                     subunit GcvPB"
                     /protein_id="HYX52949.1"
                     /translation="MSDKDIKKATRHVNQNEGLIFERSSPGKKGYRLPPLDVPAVDAK
                     KLLGNAAREDLGNMPEVSEMEIIRHFTRISTWNYAIDLGMYPLGSCTMKYNARVNEVV
                     ARLGGLADAHPYQPERISQGALRIMKTLSDCLLDITGMDAITLQPAAGAHGEMTGILL
                     IHACLKSRGNPRKKILIPDSAHGTNPATAAICGYAVENLKSNAQGMVDIPSLESQMNE
                     DVAGLMLTNPNTLGLFERDIAKIADILHKKGGLLYMDGANMNALVGKARPGDFGVDVM
                     HLNLHKTFSTPHGGGGPGSGPVACKKHLEPFLPTPIVVQKPDGTLGFDYDRPQSVGRV
                     RMFFGNFGMHVRALAYILANGPDGLRQTTEDAVLNANYIRKKLEGDFELPYKGQSMHE
                     VVFSDRIQQHKGVKTGDIAKRLIDYGFHPYTVSFPLVVPGALMIEPTESESLEELNLF
                     IDAMQAIAREVEQDPELVKSAPHSTRVTRLDETAAARKPVLRWKPGAAVSAGE"
     gene            4570..5018
                     /locus_tag="VE783_05825"
                     /pseudo
     CDS             4570..5018
                     /locus_tag="VE783_05825"
                     /inference="COORDINATES: protein motif:HMM:NF024759.4"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="GxxExxY protein"
     gene            5109..6839
                     /locus_tag="VE783_05830"
     CDS             5109..6839
                     /locus_tag="VE783_05830"
                     /inference="COORDINATES: protein motif:HMM:NF039907.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metallopeptidase TldD-related protein"
                     /protein_id="HYX52950.1"
                     /translation="MPAPRVVVFGLLLAFFALSAGFAQTSASAPATKEPVLLTTMQQE
                     LDRAVTSLKSADPAPYFISYNASDESMAMIAATNGAMLANIKRHERSVDVTVRVGSRD
                     LDNTHGENRSNSVISAYLPVDDRPDAIARVLWLNTDRMYKHAAQTFLEVKTSTKVRAE
                     EEDRSGDFSSDKPNVSISPMTRAPQFDSKEWEERVRRLSAIFAKYPEIENSTVILEVQ
                     NSARYFVSSEGAKIVDSRPLIRVLALGNTRADDGMDLARSETFDASSFDKLVSEQVMA
                     AKIEKIAQDLQKLKKAPVVEPFSGPALLSGRAAAVFFHEVVGHRLEGQRQRGENEGQT
                     FTKMIGKPVLPTFLSVEDDPTLATLGGVELSGNYTYDEEGEKGQKVELISKGVLREFL
                     MSRMPVKGFEHSNGHGRAQDGMMPVGRQGNLIVRSTHAIPDAKLRAALIEETKKEKKP
                     FGLYFEDIAGGFTLTTRNLPQAFQVMPLMVWKIYPDGRPDELVRGVNIIGTPLNVLNR
                     IVLTGEKIDVFNGECGAESGSVPVSAAAPAMLFSEVEVQKVAQGHDRPPVLPPPGFDD
                     TKIAQKKEAR"
     gene            6839..8500
                     /locus_tag="VE783_05835"
     CDS             6839..8500
                     /locus_tag="VE783_05835"
                     /inference="COORDINATES: protein motif:HMM:NF039907.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metallopeptidase TldD-related protein"
                     /protein_id="HYX52951.1"
                     /translation="MRRLISTLLIAAVCFALPVWADDASPRATVTFDDHGDPVLRAMI
                     AELKRSQEKLQLGQLQRPYYIDYQVTEMQDYSADAFLGALRTDNLNAGRLVRVVVRIG
                     DYKQDSYFGEGMGTVEVLPMEDNEMALRHNLWLATDKAYKAALSGFTEKQAALKNVEH
                     EEDVPDFSQEKASQALRDTTRLGMDLAAWKARVAATSDLFRKDPTLQSSTAAYSFRVL
                     NRYYVNTEGTVTRQGRTTYNFGFSGSTQADDGMRLDRSRSWVVTRPEELPKPEEIQKD
                     AEKLISTFAALKKAPLVEDDYRGPVLFSADATTALFERLVVPNILGLRPELGNPARTR
                     GEFASHYKNRVLPEFFTVVDDPKADKIDGTTLAGSYEYDDEGVPAQTTTVIEKGILTN
                     YLVAREPIRDFLHSNGHGRTALAASPRPQISNLIVKAANGLNPEDMKRKLLQMCKDQG
                     RPYGYYVETTGPQLTPRLLWRVYVNDGHMELVRGAVFHELDTRALRNDIVAAANDTYV
                     YNRTEPLPTAIVAPSVLFGELDIQRANKTREKLREYPAPPLSAGK"
     gene            8692..10668
                     /gene="mutL"
                     /locus_tag="VE783_05840"
     CDS             8692..10668
                     /gene="mutL"
                     /locus_tag="VE783_05840"
                     /inference="COORDINATES: protein motif:HMM:TIGR00585.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006298 - mismatch repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA mismatch repair endonuclease MutL"
                     /protein_id="HYX52952.1"
                     /translation="MGRIHVLSDHVANKIAAGEVVERPASVLKELLENSLDAGATRIK
                     VQIEGGGKKLIQVVDNGCGMVRDDALLAFERHATSKIKDADDLLNIHTLGFRGEALPS
                     IGSVARVLLETRAPEDASGTVLEIAGGKILRVEEAGLPLGTSIAVKDLFFNTPARKKF
                     LKAESTELSHLASLVTHYALANPEKHFELHSATNAMLIAAPVETHSDRIYQIFGRETL
                     DQLVPVAAAMKLERVGIPEPPPWRRDEDYEAPVPGDIRVHGFVSKPELQKLNRNSIFI
                     FVNNRLIRDRLVQHALTEAYRNIIPPTVFPVVLLFIELPNAEVDANVHPSKTEVRFRQ
                     QSLVHDFVRESVRAALMKARPVPQFTREIYAQPTAAPGFSPGALHAERSAAGAVAAIS
                     QQVPDFELQPAPQPLVTERLQFAGAAIPVEGNAALSGFGAPGVAPLTNHQNGLIPDSC
                     GNVLKEEPQAVPDALALASLRPLGQVRDSFILAVNVDGLWIIDQHVAHERVLFEKILR
                     ERSQAAVEGQRLLMPLLVELTPAQQAVFTEINDELRRNGFEVELFGTRTVAVKTAPAG
                     VETSDVEKMLLELLDQCGDPEQQLNMEKIRARIAASIACHAAIKINMPLEQNKMEWLL
                     KALSETECPMSCPHGRPVVLRYSVKEIQKAFKRI"
     gene            10670..11533
                     /locus_tag="VE783_05845"
     CDS             10670..11533
                     /locus_tag="VE783_05845"
                     /inference="COORDINATES: protein motif:HMM:NF017984.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0019104 - DNA N-glycosylase activity
                     [Evidence IEA];
                     GO_process: GO:0036297 - interstrand cross-link repair
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="crosslink repair DNA glycosylase YcaQ family
                     protein"
                     /protein_id="HYX52953.1"
                     /translation="MTDQELQELRAHKWRLDGNAVQTIEQARAFLNDVGFCLRYPQRS
                     VPLVPTFIGAYAGSGQNLPDSKHAFADPRAQQATELMVRMLREHSAYELPVGDDILIV
                     SASLFPFFYSLLSDHSPKAPPKLRAQGVKVSPLSVQVFDAIQNRGPLSKEKLRELVGR
                     ELSNAALDRSLGELWSILKITRVNYREGEGALWDVLYRWAPEVVKEAFDFSEPEAISG
                     LLGKYLDAVIAATQEEVEQFFSLFTARSKVREAMNALLTARQLSMVSIGPKTLMRVAP
                     VNEPQRRRIHG"
     gene            11526..>11692
                     /locus_tag="VE783_05850"
     CDS             11526..>11692
                     /locus_tag="VE783_05850"
                     /inference="COORDINATES: protein motif:HMM:NF014300.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004127 - cytidylate kinase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006139 - nucleobase-containing compound
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(d)CMP kinase"
                     /protein_id="HYX52954.1"
                     /translation="MAKPGAASPRRIVIAIDGPAGSGKSTLAKLLAERYQYTNIETGA
                     MYRALALKAME"
BASE COUNT         2587 a         3089 c         3756 g         2260 t
ORIGIN      
        1 ggtgggcatg tttgacgttt cccacatggg tgacatcctg atccgcggac cgcaggcgct
       61 ggaggccacg cagtggatca gcatgaacga tgcttcgaag ctgcagcaaa accaagcgca
      121 ttactcggcg ctgctctatc cagagggtgg gttcgtggac gatgtgatcg tccacaagct
      181 gggccagaac gattacctgc tggtgatcaa cgccggcacg cgcgagaaag atcattcctg
      241 ggtaaagaag aatgtgagcc ggttccgctg ccatgccgac gacgttggtg attactatac
      301 ccagattgcg attcaggggc ccagggcgga agccacgctg cagaagctca ccgatgttga
      361 tctctcgcaa atcaaaaatt attggtttaa acatgggacg gtctgcgggc tgccgaacac
      421 gatgatcgcg cgaaccgggt acacggcgga agacggattt gagatctatg tgccgtctga
      481 cgtggcgacc agcgagcgcg tgtggaacga ggcaaccgaa gccggcaagg agtttgggat
      541 tgtgccgtgc gggctaggtg cgcgcaacac gctacggctg gaagggcgta tggcgctcta
      601 cggccacgag atttccgaca gcatcaatgt gtgggaagcc gggctggacc gcttctgcaa
      661 gatggaaaag ccggatttca tcggcaaggc agcgctggag aaagccaaag ccgaagggcc
      721 gaagcgcacg ctggtaggac ttgaggcaat cgatcgcggt attccccgtg acggctacaa
      781 agtctttgac tcgacggagc aggagatcgg gtacgtgacc agcgggtcgt atgcgccgtt
      841 cctgaagaag aacatcgcct tggcgtatgt gccgccgtcg cagtcagagc tgggtcatga
      901 ggtttttgtg gagatccgcg gccagaaggt gaagtgcaag gttgttccaa ctccgtttta
      961 caaacgcccc aagaaggcgt agctcaacga aggaaggaca gaggtccaag gaatggcgta
     1021 tcccaaagat tacaagtaca ccaaagagca cgagtggatc cagatcagcg gcaagaccgg
     1081 actggtgggg atcaccgatc atgcgcagga gtcgctgggc gacatcgtct ttgtcgagtt
     1141 gcctaaactg ggagccaagc tgcagttggg caagagcttt gggacggttg aatcggtgaa
     1201 ggctgtatct gagctctatg cgccggcatc ggggacggtg acggaggtga acgagtcgct
     1261 caaccaggcg ccggaagaca ttaataagga cgcgcacaag gcctggatgg tgaagattga
     1321 gctttccgat cctgacgaga ccaacgtgct gctctccgcc gacgattatg agaagtacgt
     1381 ggcggaggag aagtagacca ttgagtaatt gggtaagttg gtaattgagt aatttgggga
     1441 gcggtgtggc cactgcttgc tccccagccg cctttcaagt ctctgattac cgggctccgg
     1501 gagttgtccg aacttacccg attaccaagt tacccactta ccaacttaaa attatgcgct
     1561 atcttccaaa atcgcccgcc gaccggcagc agatgctgcg cgagattggc tccaagacca
     1621 ttgacgacct tttcgagccg atcccggctg aataccggct gaagcgcgac ctcaacgtgc
     1681 cgcggcagat ggccgagagc gaggtcatcg agttcttcca tcagtgtgcc gcgacgaatg
     1741 cggcgcgtta cgcgttgttt atcggcgccg gggcttatca ccattaccgc ccagtggtga
     1801 tcgattcgct gatttcgcgt ggcgagttct ttactgctta cacgccgtac cagccagaga
     1861 tcgcgcaggg gacgctgcag gcaatcttcg agttccagac catgatctgc gagctcacgg
     1921 gaatggaagt ggcgaatgcg tcaatgtatg acgcctccac cggcacggcc gaagccatgc
     1981 tgatgatggt gcggctgacg ggaaagaatt ccgtggtggt ggcgcggacg gcgcacccgg
     2041 aataccggga ggtgatcaag acctacacgc agcaccaggg cctgccgatt gcggagtgtg
     2101 gctataagga agatggcagg ctggacctct ccgaccttga aaagaagatc accgacgaca
     2161 cggcgggcgt gctgatccag tcgccgaatt tctttggaac gattgaagac gtggcggcga
     2221 ttgctgatct ggtgcatcgg aagggcgcgt tgctgactgt ggcaatctcc gaggcattgt
     2281 cattgggcgc ggtgaagccg ccgaccgaag ctgacatcgt ggcgatggag tcacagtcgt
     2341 tcggcgtacc acttgggtac ggcgggccct acgcgggcgt gctggcgacg aaagaaaaat
     2401 atgttcggca gattccgggg cgtttggtgg gcgagacgcg cgatcgcaat ggcaagcgcg
     2461 gctttgtgct gacgctttca acgcgcgagc agcacattcg ccgcgaaaag gcgacctcga
     2521 acatctgcac caaccaagcg ctgatcgcca ccatggcgac gatctacatg acgatttatg
     2581 gccgcgaagg gctgaaggaa ctcgcgcagc agaacctggc aaaagcggcc tacgcagccg
     2641 ctgaattctc aaagaaggcg aaagtgttgt ttgcgggctc gccgcgcttt aatgagtttg
     2701 tggtgcagac caaggaagat tcctacgaga tcaacagccg gctgctggag aagaagataa
     2761 tcggcggctt cccgctcaag aagttttatc cggagctggg caatgcggcg ctatggtgct
     2821 gcacggaaat gaacacgaaa gagcagatcg atgcggcggt acaggcggtg ggccaatgag
     2881 cgataaagat atcaaaaagg cgacacggca cgtcaaccag aatgaagggc tgatttttga
     2941 gcgctcgtcg ccggggaaaa aaggatacag gctgcctccg ctggacgtac ctgcagtgga
     3001 tgcgaagaag ttgctgggca atgccgctcg tgaagacctg ggcaacatgc ccgaggtcag
     3061 cgagatggag atcatccgcc acttcacgcg tatatccacc tggaactacg cgatcgatct
     3121 tggcatgtat ccgctcggct cctgcaccat gaagtacaac gctcgcgtga acgaagttgt
     3181 ggcgcggctg ggcggactgg ccgacgcgca tccttaccag ccggagcgga tttcacaggg
     3241 cgcgctgcgg atcatgaaga cgctctcgga ctgcctgctg gacatcaccg gcatggacgc
     3301 gatcacgttg cagcccgcgg cgggcgcgca cggcgagatg accgggatcc tgctgatcca
     3361 tgcctgcctg aagtcgcggg gcaatccgcg caagaaaatt ttgatccccg attccgcgca
     3421 tggaaccaat cccgctacag cggcgatttg tggctatgca gtggaaaacc tgaagtcgaa
     3481 cgcgcagggc atggtcgata ttccatcact ggaatcgcag atgaacgaag acgtggcggg
     3541 gctgatgctt accaatccca acacgctggg cctgttcgag cgcgatattg cgaagattgc
     3601 agacatcctg cacaaaaagg gcggcctgct gtacatggat ggcgccaaca tgaacgcact
     3661 ggtagggaag gcgcggccgg gcgactttgg cgtggacgtg atgcacctga acctgcacaa
     3721 aacgttttcc acgccgcacg gcggtggcgg cccgggctcg ggaccagtgg cctgtaagaa
     3781 acatcttgag ccgtttcttc ctacgccgat tgtggtgcag aagccggacg gcactctggg
     3841 atttgattac gatcggccac agtccgtggg ccgcgtgcgg atgttcttcg gcaacttcgg
     3901 catgcatgtg cgcgcgctgg cttacatcct tgcgaacggg cccgatggat tgcgccagac
     3961 caccgaagac gcggtgctca acgcgaacta tatccgcaag aagctggaag gtgacttcga
     4021 gctgccgtac aaaggccagt cgatgcacga agtggtcttc agtgatcgta ttcagcagca
     4081 caagggcgtg aagaccggcg acattgccaa gcggctgatt gattacggat tccatcctta
     4141 taccgtctcg ttcccgctgg tggtgccggg agcgctgatg attgaaccta ccgaaagcga
     4201 atccctggag gagctcaacc tgttcattga cgcgatgcag gccattgcac gcgaagttga
     4261 acaggacccc gagctggtga agagcgcccc ccattccacg cgcgtgacaa ggctggacga
     4321 aaccgcagct gccagaaaac cggtgctgcg gtggaagccg ggggcggcgg tttctgcggg
     4381 agagtaaaga gcggatttac cgcagagtac gcagagagcg cagagggaaa aagggctgtc
     4441 tcgcgagttc gactgtgtgg gcggtgctgg tatacggcag acggtgagtg acactggcac
     4501 ccacagcaga caaaaagagg acgcatagaa tttagagaaa tagctcgatc aagaaggaca
     4561 acaaactgaa tggttgcggg tccgagacca gcggaatact ctgaacgcag agagaaccaa
     4621 gtaagcggga tcattcttga ctctgctatt gctgttcata acgccttagg gcccgggctt
     4681 ctggaaagcg cttacgaggc gtgccttttg catgagcttg taagtcgtgg cttgaaagtg
     4741 cagtcgcagg tgccgctgcc gatcaactat cgcggagtaa gcctcgatgt gcgtatcgaa
     4801 tggatctagt cgtcgaagac ctcgtaatcg tggaggtcaa agcggttgag aagctcatgc
     4861 cgattcacga ggcccaggtg ctctcttacc ttaagctccg aaagcttaaa ctcggtcttc
     4921 tcatcaattt ccacgttttg cgcctaatgg acggattcaa gaggatcgcc aacggcttta
     4981 attcggtttc tctgcggtct ctgcgcattc tgcggtaaaa gtggcggttg ttctgcggtg
     5041 aagaccctaa aggcagcacc gtcagtaacc gttctggtgt ctaaaattca ggtaaactga
     5101 tctatatcat gccagcccca agagttgtag tttttggcct gcttctggcc ttctttgcat
     5161 tgtctgcagg atttgcccag accagcgctt ccgccccggc caccaaagag ccggtattgc
     5221 ttaccaccat gcagcaggag ctggatcgtg ccgtgacttc gctgaagtcg gccgacccgg
     5281 cgccgtactt catcagctat aacgccagtg atgagagcat ggcgatgatc gcggccacga
     5341 acggggcgat gctggcgaac atcaagcgcc acgagcgttc ggtggacgtg acggtgcggg
     5401 tgggaagccg tgatctggac aatacgcacg gcgagaaccg ctccaattcc gtgatctccg
     5461 cctacctgcc agttgacgac cggccggatg cgattgcgcg cgtgctgtgg ctcaacaccg
     5521 atcgcatgta caagcacgcg gcccagacat ttctggaagt aaagaccagc accaaggtac
     5581 gcgcggaaga agaagaccgg tcgggggatt tctccagcga caagccaaac gtctccataa
     5641 gcccgatgac ccgggcgccg cagttcgaca gcaaagagtg ggaagagcgg gtgcgccggc
     5701 tgtccgcgat tttcgccaag tatccggaga ttgaaaactc cacggtgata ctggaggtgc
     5761 agaactcagc gcgctacttc gtttccagcg aaggagccaa gattgtggat tcgcggccgc
     5821 tgatcagggt gctggcactg ggcaacacgc gcgcggacga cggcatggac ctggcgcgat
     5881 cagaaacgtt tgacgcctct tctttcgaca agctggtttc tgagcaagtg atggctgcga
     5941 agattgaaaa gatcgcgcaa gacctgcaga agttgaagaa agcgccggtg gtggagccgt
     6001 tcagcgggcc ggcattgctt tccgggcgcg cggctgcggt gttcttccat gaagtggttg
     6061 ggcatagact ggaagggcag aggcagcgcg gcgagaacga aggccagacg tttaccaaga
     6121 tgattggcaa gccggtgctg ccgaccttcc tgagcgtcga ggacgatcct acgctggcga
     6181 ctctgggcgg cgtggagctg agcggcaatt acacctatga cgaggagggc gagaagggac
     6241 agaaagtgga gcttatctcc aaaggcgtgc tgagggaatt tttgatgtcg cgcatgccgg
     6301 tgaaagggtt tgagcactcg aacggccacg gtcgcgcaca ggacggcatg atgccggtgg
     6361 ggcgacaggg caatctgatt gtccgttcca ctcatgcgat tcctgacgcg aaactgcggg
     6421 cagcgctgat tgaagaaaca aaaaaggaga agaagccatt cggcctctac tttgaagaca
     6481 ttgccggcgg cttcacgctg accactcgca acctgccgca ggcattccag gtgatgccgc
     6541 tgatggtgtg gaagatttat cccgatgggc gtccggatga gctggtgcgc ggcgtgaaca
     6601 ttattggcac gccgctgaac gtgctgaacc ggattgtgct taccggcgaa aagattgacg
     6661 tgttcaacgg agagtgcgga gcagagtcag ggtccgtgcc cgtttcggct gccgctccgg
     6721 ccatgctgtt ttcagaagtt gaagtacaga aggtggcgca ggggcacgac cggcctccag
     6781 tgctgcctcc gccgggcttt gacgatacca agatcgccca gaagaaggag gcccgctaat
     6841 gcgcagactt atctcaacct tgctgattgc ggcagtctgc tttgctctgc cagtgtgggc
     6901 tgacgatgcg tcgccgcgcg cgactgtgac gtttgatgat cacggcgatc ccgtgctgcg
     6961 ggcgatgatt gcggagctga agcgctccca ggagaagctg cagctggggc agttgcagcg
     7021 accttattac attgattacc aggtcaccga aatgcaggac tactctgctg acgctttcct
     7081 gggcgcgctg cgcaccgata acctgaacgc cggcaggctg gtgcgcgtgg tggtgaggat
     7141 tggcgactac aagcaagaca gctattttgg cgaaggcatg ggcacggtgg aagtgctgcc
     7201 catggaagac aacgagatgg cgctgcggca caatctctgg ctggcgaccg acaaagcgta
     7261 caaggcggca ctgagcggct ttaccgagaa gcaggcagca ctgaagaacg tggagcatga
     7321 agaagacgtg ccggacttct cgcaggagaa ggcttcacag gcgctgcgcg ataccacgag
     7381 actggggatg gacctggcag cgtggaaggc gcgggtggca gcaacgtcag acctgttccg
     7441 taaagatcca accctgcaaa gctcaaccgc ggcgtacagc ttccgcgtgc tgaatcgcta
     7501 ttacgtgaac actgaaggga cggtcacacg gcaaggccgg acgacgtata actttggttt
     7561 ttcgggcagc acgcaggccg atgatggcat gaggctggac cgcagccgca gctgggtggt
     7621 gacaaggccg gaagagctgc ccaagccaga agaaattcag aaggatgcgg agaagctgat
     7681 cagcaccttt gcggcgctga agaaggctcc gctggtggaa gatgattatc gcgggccggt
     7741 gctgttctca gccgatgcaa cgaccgcgct ctttgagcgg ctggtggttc ccaacatcct
     7801 tggcctccga ccggaactgg ggaacccggc acgtactcgc ggagagtttg cgtcgcatta
     7861 caagaaccgc gtgctgccgg agtttttcac ggttgtggac gatccgaagg cagacaagat
     7921 cgacggcaca acgctggccg gaagttatga gtacgacgat gaaggcgtgc cggcgcagac
     7981 caccacggtg atcgagaagg gcattctcac caactacctg gttgcgcgcg agcccatccg
     8041 cgatttcctg cactcgaatg gtcatggcag gacggcgctc gcggcgagcc cacgtccgca
     8101 gatctcaaac ctgatcgtga aagcggcgaa cggactgaat ccggaagaca tgaagcgcaa
     8161 gctgctgcag atgtgcaaag accagggccg gccttacgga tattacgtgg agaccaccgg
     8221 gccgcagctc actcctcgcc tgctgtggcg tgtctacgtg aacgacggac acatggaact
     8281 ggtgcgcgga gcagttttcc acgagctgga tacgcgcgcg ctgcgcaatg acattgtggc
     8341 cgcggcaaac gatacgtacg tctataaccg aacggagccg ttgccgactg cgattgttgc
     8401 gccttcagtg ctgtttggag agctggacat ccaaagagca aacaagacac gggagaagct
     8461 gcgggagtac ccagccccgc cgttaagcgc cggaaagtag acgggcgaga gcttaaccac
     8521 gaaggagcac gaagagagtg ctccttcttc ttttcccata tcccgcatct cccattcgat
     8581 aacgacagga gtcatgttgc agcttggtgt gattcaaaca gcgcgagttc tctctggttc
     8641 ttcttcccct ttgtgaacct tcgtgccctt tgtggttaaa ttgaggttcc aatgggccgc
     8701 atccacgttc tttctgatca cgtcgcgaac aaaatcgctg ccggcgaggt ggtggagcgg
     8761 cctgcttccg tgctgaaaga gttgctggag aactcgctcg atgccggggc aacgcggatc
     8821 aaagttcaga ttgagggtgg cggcaagaag ttgattcagg tggtggacaa cggctgcggg
     8881 atggtgcgag atgatgcgct gctggccttc gagcgccatg cgacttccaa gatcaaagat
     8941 gctgacgacc tgctgaatat ccacacgctc ggcttccgag gcgaggcgct gccctcgatc
     9001 ggttccgtag cgcgcgtgtt gcttgagacc agggcgccgg aggacgcgag cgggacggta
     9061 ctggagattg cgggaggaaa gatcctgcgg gtggaagaag ccgggctgcc gctgggaacg
     9121 tcaatcgcgg tcaaggacct gttcttcaac actccggcac gaaagaaatt tttgaaagct
     9181 gaatccacgg agctctcgca tctggcgtcg ctagtcacac actacgcgct ggcgaacccg
     9241 gaaaagcatt tcgagctgca ctcggcgacc aatgccatgc tgattgccgc gcctgtggag
     9301 actcattccg atcgcattta ccagatcttt ggccgggaga cactggacca gcttgtgccg
     9361 gtagctgcag caatgaagct ggagcgggta gggattcccg agcctccgcc gtggcgcaga
     9421 gatgaagatt acgaagcgcc ggtgcccggg gacatccgcg tgcatggctt tgtttccaag
     9481 ccggagttgc agaagctgaa ccgcaactcg atcttcatct ttgtaaacaa ccggctgata
     9541 cgcgaccgac tggtacagca cgcgctgacc gaagcttacc gtaatatcat cccgcccacg
     9601 gtctttccgg tggtgctgct gtttatcgag ttgccgaatg cagaggtgga tgccaatgtg
     9661 catccttcca agaccgaggt gcgcttccgg cagcagtcgc ttgtgcacga ttttgtccgg
     9721 gagtcagtgc gcgcggcgct gatgaaggcg cgaccggtgc cacagttcac gcgtgagatc
     9781 tacgcgcagc ccacggccgc gccaggattt tcgccgggag cattgcacgc cgagcggtcg
     9841 gctgccggag cggtggcggc catttcacag caggttcctg attttgagct gcaaccggca
     9901 ccccagccgc ttgtgacgga gcggttgcaa tttgccggcg cggcgatacc ggtggaaggt
     9961 aatgccgcgc tgagcggctt cggagcgccg ggagtggcgc cgctcacaaa tcatcaaaat
    10021 ggcctgatcc cggattcttg cggcaacgtg ctgaaagaag agcctcaagc ggttccggat
    10081 gctctggcgc ttgccagcct gaggccgctg gggcaggtgc gcgattcgtt tatcctggca
    10141 gtgaacgtgg atggattgtg gatcatcgat cagcatgtgg cgcacgagcg cgtgctgttt
    10201 gagaagatcc tgcgggagcg gtcgcaggcg gcagtggaag gccagcggct gcttatgccg
    10261 ttgctggtgg agcttacgcc ggcgcagcag gccgtgttca cggagatcaa cgacgagttg
    10321 cggcgcaacg gctttgaggt ggagctgttc ggaacgcgca cggtcgcggt aaagacggca
    10381 ccggcaggcg tagagacgag cgatgtcgaa aaaatgttgc tggagctgct ggaccagtgc
    10441 ggcgacccgg agcagcagct gaatatggaa aagatccggg cgcgaattgc agccagcatc
    10501 gcgtgccacg cggccatcaa gatcaatatg ccgctggagc agaacaagat ggagtggctg
    10561 ctgaaggcgc tgagtgaaac cgagtgtccc atgagttgcc cgcatggacg gccggtggtg
    10621 ctcaggtatt ctgtaaagga gatacagaag gcgttcaagc gaatttgaga tgacggacca
    10681 ggaattacag gaactgcgcg cccataaatg gcggctggac ggcaatgctg tgcagaccat
    10741 tgagcaggcg cgcgctttcc tgaatgacgt gggcttctgc ctgaggtatc cgcagcgctc
    10801 tgttccactt gtgcccacgt tcattggagc gtatgccgga tcagggcaga acctgccaga
    10861 cagcaagcac gcctttgccg atccgcgcgc ccagcaggca acggagctga tggtgcgaat
    10921 gctacgcgag catagcgcat acgagctgcc cgtgggtgac gacattttga ttgtctcggc
    10981 ttcgctgttc ccatttttct attcactctt gagcgatcat tcgcccaaag cgccgccgaa
    11041 gcttcgggcc cagggcgtga aggtctcgcc gctatcagtg caggtgtttg atgcgatcca
    11101 gaatcgcggc ccgctcagca aggagaagct gcgcgaactg gttggccgcg agctgagcaa
    11161 tgctgcgctg gaccgttcgc tgggcgagct gtggtcaatt ctgaagatca cgcgcgtgaa
    11221 ttatcgtgaa ggcgagggcg cgctatggga tgtgctttac cgctgggcgc cggaggtggt
    11281 gaaagaggct ttcgattttt cagagccgga ggcgatttcg gggctgctgg gcaaatatct
    11341 tgatgcggtg attgccgcga cgcaggaaga agttgagcag ttcttctcgt tgttcacagc
    11401 gcggtcaaaa gtgcgcgagg cgatgaatgc actcctgacg gcgcggcagc tcagcatggt
    11461 gtcaattggg ccgaagacgc tgatgcgggt cgccccggtg aatgaaccgc agcggagacg
    11521 catccatggc taagccgggc gccgcatcgc cgcggcgcat cgtgattgcc attgatggac
    11581 ccgcaggatc gggcaagagt acgctggcga agctgctggc agagagatac cagtacacca
    11641 acatcgagac cggcgcaatg tatcgcgcgc tggcgcttaa ggcaatggaa tt
//
LOCUS       DASQYP010000181         3228 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_74346, whole genome shotgun sequence.
ACCESSION   DASQYP010000181 DASQYP010000000
VERSION     DASQYP010000181.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 3228)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3228)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3228
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_74346"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            105..2081
                     /locus_tag="VE783_05855"
     CDS             105..2081
                     /locus_tag="VE783_05855"
                     /inference="COORDINATES: protein motif:HMM:NF014081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HYX52955.1"
                     /translation="MKIRRYALPVILLVIATFAAAQASAPQTSTQPTEEGKWLLHKFA
                     QHIGQETYTLASTPDGVTLTSDFKFTDRGQEVPLKTTLSMAPDLTPRDFESKGKMSRF
                     SPQETTVHGRSAGNVTVGANEPFFDVASYAPVAVQMMLVRYWRAHGKPASLKTLPSGA
                     VQITDQGPQDFSIAGKKASLHHVTIRGLIWGMEALWFDAQDHLIALVGVDGEFDHFEA
                     VDANYEDGLSAFISTAARENMSNLAQIAAGFSGQPVQTIAIVGGRLIDATGRPPMENS
                     AIVIRDGMIVTTGPASRVQIPKDAQVIHAEGKSVLPGLWEMHAHFEQVEWGPIYLATG
                     VTTARDVGNEREFIVSVRDAISSGKGLGPRLLMAGIVDGTSQFSLGVNRVDTPEQARE
                     QVQQYKKDGALQIKVYSSVKPDILKIVTAEAHKLGMTVTGHVPVGMNAMQAIDDGMDQ
                     INHIQYITAMMVDPKTRTIDPDSEQVKDLIAALQQHHTVVDPTMALMELFSHPRNVDV
                     ATFEPGFAKVAPEIREPIGGMGTDPANAEQAQKRFGLMLEAVKLLHDAHIPIVAGTDQ
                     AVPGYSVDREIELYVKAGFTPMEAIQSATLVPARAMGLTDSGTLQVGKRGDVIIVDGN
                     PAQNISDIRKVTTVITGGRIFQPAPLWKSVGFQP"
     gene            2098..2802
                     /locus_tag="VE783_05860"
     CDS             2098..2802
                     /locus_tag="VE783_05860"
                     /EC_number="5.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR00035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047689 - aspartate racemase activity
                     [Evidence IEA];
                     GO_process: GO:0006520 - amino acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid racemase"
                     /protein_id="HYX52956.1"
                     /translation="MSKHIGIVGCSAEGAALCYRTICLEAEPLMGRHAHPEITLHTIP
                     LADYMRLIERNGAGADWPGVAELMLRSAEALKRAGAGFLVCPDNTVHQAFKYVLPRSP
                     LPWLHIAEEVGREAQRRGFENLALTGTKFLVESDVYPEKLDALGIAWQRPKPEQRERT
                     NDIIFDELVRGIQRLESLFYMQQLIEQMKTRGCDAVVLGCTELPLLINDDDSPLPTLD
                     STRLLARAALRKAVEG"
     gene            complement(2822..>3228)
                     /locus_tag="VE783_05865"
     CDS             complement(2822..>3228)
                     /locus_tag="VE783_05865"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52957.1"
                     /translation="ARSFETNLATPSGRSRERLNRLVGKASAEALIERHAYDTTQSRT
                     LDLGKLAPANTKGEFYFVFEPGNKLNVKAVSGDDALQAALQKNAAKIIPSVVFPDDGD
                     LKLIRQGIVMCGQYNQKCELVFLTSDSALSGR"
BASE COUNT          686 a          978 c          945 g          619 t
ORIGIN      
        1 cattgaggcc agctttcttc ctgtggaacg caagctcatg ctgctgcaac agattgatat
       61 gttcgcgcga gataaccgat aaaaacagca gatcgagata gaagatgaaa atcagacgct
      121 acgccctgcc ggtaatcctg cttgtgatcg ccactttcgc ggcggcccaa gcatcagcac
      181 cacagacctc cacccaacca actgaggaag gcaagtggct gctgcacaag ttcgcccagc
      241 acattggcca ggaaacttac acgctcgcca gcacccccga tggcgtaacc cttacctccg
      301 atttcaagtt cactgatcgt gggcaggaag tgccgctcaa gacgacgctg agcatggcgc
      361 ctgatctcac gccgcgcgac tttgagagca agggcaagat gtcgcgcttc tcgccgcagg
      421 aaacaactgt tcatgggcgc agtgcgggaa acgtcacggt cggcgcaaat gagccgttct
      481 ttgacgtagc gtcctacgcg ccggtcgccg tgcagatgat gctggtgcgc tactggcgcg
      541 ctcatggaaa acccgccagc ctcaagactc tgcccagcgg cgcggtacag atcaccgatc
      601 aggggccgca ggacttcagc atcgccggca agaaagcgtc gctgcatcac gttactattc
      661 gcgggctgat ctggggcatg gaggcgctct ggtttgacgc ccaggaccat ttgatcgctc
      721 tcgtaggcgt cgacggcgaa ttcgatcatt ttgaagccgt agacgcgaac tatgaagacg
      781 gtctctccgc cttcatcagc accgccgcgc gcgagaacat gtccaatttg gcgcagattg
      841 ctgccggctt cagcggccag ccggtgcaga cgattgccat tgtgggtggc cggctgatcg
      901 atgctacagg caggcctccg atggaaaatt cagccatagt aatccgtgac ggcatgatcg
      961 ttaccaccgg gccggccagc agagtccaga ttccgaaaga cgcgcaggtc atccacgccg
     1021 aaggcaagag cgtgctgcca ggcctgtggg agatgcacgc gcactttgag caggtggagt
     1081 ggggccccat ttatctcgcc accggcgtca ccaccgcgcg tgatgtgggt aatgaacgcg
     1141 agttcatcgt cagcgtgcgc gacgccatct cctccggcaa aggcctgggg ccgcgcctgc
     1201 tcatggccgg aatcgttgac ggcaccagcc agttttcgct cggcgtaaat cgcgtggaca
     1261 cacccgagca ggcgcgcgag caggtgcagc agtacaaaaa agacggcgct ctgcagatca
     1321 aagtctatag ctcggtgaaa ccagacattc ttaagatcgt caccgcagag gcgcacaagc
     1381 ttggaatgac cgtgaccggc cacgtgccgg ttggcatgaa tgccatgcag gccattgatg
     1441 acggcatgga ccagatcaac cacattcagt acatcactgc catgatggtt gatcccaaaa
     1501 cgcggaccat cgatcctgac tcggagcagg taaaagacct gatcgccgcg ctgcagcagc
     1561 accacactgt tgttgatccc accatggcac tcatggagct gttcagccat ccccgcaacg
     1621 tggatgtggc gacttttgag cccggctttg ccaaagttgc tcctgaaatc cgggagccaa
     1681 tcggcggtat gggaaccgac cccgccaacg ccgagcaggc gcagaagcgg ttcggcctga
     1741 tgctggaagc ggtgaagctc ttgcacgacg cacatatccc gatcgtcgcc gggacagatc
     1801 aggctgtgcc gggctatagc gtggaccgcg agattgagct ctacgtcaaa gctggattca
     1861 cccccatgga ggcgattcag tccgcaactc tcgtccccgc gcgcgccatg ggtctcacag
     1921 actcaggcac actgcaagtt ggcaaacgcg gcgacgtaat cattgttgac ggcaacccgg
     1981 cgcagaatat cagcgacata agaaaggtga cgacggtgat taccggcgga cgcatcttcc
     2041 agccggcgcc gctctggaag tcggtcggct tccagccgta accacgttcg ggggcacatg
     2101 agcaaacata tcgggattgt cggctgcagt gccgagggcg cggcgctctg ctatcgcact
     2161 atatgtctgg aagctgagcc gctcatgggc cgccatgcgc atcctgagat cacgctccac
     2221 accatccctc tggccgatta catgcggctg atcgagcgca acggcgcggg cgccgattgg
     2281 cccggcgtgg ctgagctgat gctgcgctcc gcggaagcgc tgaagcgagc gggcgccggc
     2341 tttctggtct gcccagacaa caccgtccac caggccttca agtacgttct gccgcgttca
     2401 ccgctgccat ggctgcacat tgccgaagaa gtcgggcggg aagcgcagcg gcgcggcttt
     2461 gaaaacctgg cgctcaccgg gacaaagttt ctggtggaaa gcgatgtcta cccggagaag
     2521 cttgacgcgc tcggaatcgc ctggcagcgc cccaagccgg aacaacgcga gagaaccaac
     2581 gacatcatct ttgacgagct cgttcgcggc attcagcggc tggaatcgct cttctacatg
     2641 cagcagctga tcgagcagat gaagacccgc ggctgtgacg cggtcgtgct cggctgcact
     2701 gaactgccgc tgttgatcaa tgacgatgat tcaccactcc cgaccctgga ctcaacccgg
     2761 ctgctggccc gggccgcgtt gcgcaaagcc gttgagggtt gatcgtctcg ggctaaattt
     2821 cttatctccc gctcagcgca gaatcgctcg tcaaaaacac cagttcgcat ttttggttgt
     2881 actgtccgca catcacaatg ccctgccgga tcagcttcaa atcaccgtcg tccgggaaga
     2941 ccacgctggg aatgatcttg gcggcatttt tctgcaaagc cgcttgtagc gcgtcgtcac
     3001 cgctcaccgc tttcacgttc aacttgttac ccggctcaaa aacgaagtaa aactcgcctt
     3061 tggtatttgc cggcgcaagt ttgcctaagt cgagagtacg gctttgggta gtgtcatacg
     3121 cgtgccgttc aataagggcc tccgcgctgg cttttcctac caggcggttg aggcgctccc
     3181 ggctgcggcc tgaaggtgtt gccagattcg tctcgaagct gcgggcgg
//
LOCUS       DASQYP010000182         3722 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_113402, whole genome shotgun sequence.
ACCESSION   DASQYP010000182 DASQYP010000000
VERSION     DASQYP010000182.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 3722)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3722)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3722
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_113402"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(6..2474)
                     /locus_tag="VE783_05870"
     CDS             complement(6..2474)
                     /locus_tag="VE783_05870"
                     /inference="COORDINATES: protein motif:HMM:TIGR03434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HYX52958.1"
                     /translation="METLLQDVRFGIRMLVRSPIVTLVAVLTLALGIGANTAIFSTLN
                     GLFLRPLPVANADRLTALAGQTKGVDGVGNFSWLEYKDIRSEANGFSDVVGYNLNLVG
                     FDADGKSDSIVVSFVSGNYFPALGLKPAAGRFISGEETEKLGSAPEVVLGYGLWKKRF
                     NEDPSVIGKQIKLSGKPATIVGVAPKGFHGLYSLVEMQAYLPMGMRTNWTDKQAAENF
                     WTRRDSRQIIVLAYLKPGMSMQQAQSSLNVVTQRWAQQYPEDKDFSALIFPERLSRPE
                     PDPSNGILIVGVLFMVLAGLVLLLACTNVANIVLVRSTARAREMAVRAALGAARTRLV
                     RQLMTESIVLAALGGAVGLLIGAWASNLLGSIQIKALGSVLLFDVSFDWRVFAFGLTA
                     ALVTGLLVGSAPAFRVSRTNLSQVLHEGSRGILAGSTKSRFRNALVVVQVAGSLLLLV
                     VAGLFVRSTRNAERTYLGFDPHHVVNASFDLRSLNLEPEDAQKMSRMLEQRVRELPGV
                     ESVSLASTVPMGYRNEGGHIFIEGQAAAGSDKAPRVDLNRVSRDYFQTMRIPVLRGRT
                     FTDQDNAKAPLVAVVNEYLAKRYFPNQEAIGKRFSLVAETGPFIEIVGITRTGKYTNP
                     TESPKAFVYLPIEQSGEMIPTLQVRTSSDPAAMATQLEGEIRSLLPGVAIIGVETMEQ
                     TLEGANGLFLYRMGTRFSGALGLLGLILAVVGVYGVISYAAALRTHEIGVRMALGASR
                     STILAMVLKQGLKLVGFGVAAGLVLTLIATRGIVSLLVDVSPMDPLTLIVVSLLLGAV
                     GLLASFIPARRAMNVEPLRALKYE"
     gene            2736..>3722
                     /locus_tag="VE783_05875"
     CDS             2736..>3722
                     /locus_tag="VE783_05875"
                     /inference="COORDINATES: protein motif:HMM:NF013560.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008237 - metallopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008241 - peptidyl-dipeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M2 family metallopeptidase"
                     /protein_id="HYX52959.1"
                     /translation="MQLTRPVRILFTLLLGSAIAFTQAKPAGATADKKAAATKSATAK
                     GAPTLQEAEAFMKKAEAQLDDLGVRASRAQWVQENFITDDTEMMSAQAQERLTAVVTQ
                     LALDARRFESLKMPPELQRKFKLLKLSLVAPAPNNDAERKELTTLASNLDGMYGKGKY
                     CKPQADGKQKCLSLNDLSRILATSTNPDELLDAWVGWHKISIPMRPKYSRFVELSNKG
                     AKELGFKDTGAMWRSNYDMSPEQFSAEVERLWRQVEPFYVSLHTYVRKQLIKKYGKVA
                     ERPDGMIPAHLLGNMWAQEWGNIYPLVAPANGGQGYDLTQLLKDHKVNELGMV"
BASE COUNT          822 a         1151 c         1048 g          701 t
ORIGIN      
        1 agcagctatt cgtacttcag tgctctcaac ggttccacgt tcatcgcgcg gcgagccggg
       61 atgaaagaag ccagcaagcc taccgctccg agcagcagag agaccacaat gagcgtgagc
      121 gggtccatgg gactcacgtc cacaagcagg ctaacgatgc ccctggtcgc gatcagagtc
      181 aggactagcc ctgcggccac gccgaagccc acaagcttta atccctgctt cagcaccatt
      241 gccagaatcg tgctccggct cgcgcccagc gccatgcgaa caccgatctc atgcgtacgc
      301 agcgccgccg cgtaggagat cactccatag acaccaacca cggcgagaat caggcctagc
      361 agtcccagtg cgccgctgaa gcgcgttccc atgcgataga gaaacagtcc atttgcgcct
      421 tccagcgttt gctccatcgt ctccacgcca atgattgcca caccgggaag cagtgagcgg
      481 atttcccctt cgagttgcgt cgccatggct gccggatcgg atgaagtccg tacctgaagc
      541 gtcgggatca tctcgccgct ctgctcaatc ggcaggtaaa cgaaggcttt cgggctctct
      601 gtcgggttgg tgtacttgcc cgtcctggta atgccgacga tttcaatgaa aggcccggtt
      661 tctgcgacca ggctgaagcg cttgccgatt gcctcctggt tcgggaaata acgcttcgcc
      721 aaatactcgt tgaccacggc gacaagcggt gccttcgcgt tatcctgatc tgtgaaagtg
      781 cgcccgcgca gcactgggat gcgcatggtc tggaaatagt cccggctcac gcggttgaga
      841 tcgaccctgg gtgccttatc agacccggct gctgcctgcc cttcgatgaa gatatggcca
      901 ccttcgtttc ggtagcccat cggcacagtt gatgccaggc tcaccgattc aactccaggc
      961 agctcgcgca ctcgctgctc cagcatgcgc gacatcttct gggcgtcttc cggctcaagg
     1021 ttcaggctgc gcaggtcgaa gctcgcgtta acgacgtgat gcggatcgaa gcccagatag
     1081 gtgcgctctg cgttgcgcgt actacggaca aacagtcctg cgactaccag cagcaggagc
     1141 gagccagcca cctgaaccac taccaaagcg tttcggaacc gggatttcgt gcttccggca
     1201 agtatgccgc ggctgccttc gtgcaacacc tggctcaggt tcgtgcggct gacgcggaaa
     1261 gcgggcgcag accccacgag taatccggtg acgagcgctg cggtcaggcc gaatgcgaat
     1321 acacgccagt caaagctgac atcgaaaagc agaacgctgc ccagcgcctt gatctgaata
     1381 gagccgagca gattgctggc ccacgcccca atcagcagtc ccactgctcc acccagagca
     1441 gccagcacga tgctttcagt catgagctgg cgaacgagcc gtgtccgggc tgcgcccaga
     1501 gcagcgcgca ccgccatctc acgcgcacgc gcagtggaac ggacgagaac gatattcgcg
     1561 acatttgtgc acgctagcag aagcacgagc ccagccagaa ccatgaacag cacaccgaca
     1621 attaggattc cgttggaagg atccggctcc ggccttgaca gtcgctcagg gaagatgagc
     1681 gcgctgaagt ccttatcttc agggtactgc tgagcccagc gctgtgtgac cacgttaaga
     1741 gaactctgcg cctgctgcat gctcattccg ggcttcaggt aggcaaggac aattatttgg
     1801 cgcgagtctc tcctggtcca gaaattttcg gcagcctgct tatcggtcca gttcgtgcgc
     1861 atgcccatcg gcaagtaggc ctgcatctca accagcgagt aaaggccatg gaagcccttc
     1921 ggcgcgaccc cgacaatcgt cgcgggcttg ccgctcagct ttatctgctt accgatgacg
     1981 gacgggtcct cgttgaagcg cttcttccag agcccatacc cgagcacgac ctctggagca
     2041 ctaccgagtt tttctgtctc ctcgccggag atgaatcggc cggcagccgg tttcaacccc
     2101 aacgccggga agtaatttcc gcttacgaag ctgacaacta tgctgtccga cttgccatcg
     2161 gcatcgaagc ctaccaggtt gaggttgtag ccgaccacat cagaaaagcc gttcgcctct
     2221 gaacggatgt ccttgtattc cagccacgag aagttaccaa caccgtcaac gccttttgtc
     2281 tgcccggcga gcgcggtgag gcgatcagcg ttggccactg gcagcgggcg caggaaaagg
     2341 ccgttcagcg tgctgaagat cgcggtattc gcgccgatgc ccagcgcgag tgtaagaacc
     2401 gccaccaggg tgacgatcgg gctccttacc agcatgcgaa tgccgaaacg aacgtcctgc
     2461 aacagcgttt ccatggtgaa gctcctcaaa agatgaaagc ggttggcctg agcatccttt
     2521 ggcaatccgg gggccaacca ctcgcaaggc gcggatttcc atgaccctca acgggatata
     2581 cgcgctcgca gcgaagtaag ttccgtgcca acgctgtccg attccgaaca cctgaagtca
     2641 taagcgcaca acagcttacg gacaaaccgg catttgctaa tcgccgttac aaacggctac
     2701 tctaggcagt tttgagatcg ctctctggag gagcaatgca acttacccga cctgtcagga
     2761 ttctgttcac gctgctgctc ggctctgcta tcgcgttcac tcaggcaaag cccgccgggg
     2821 cgactgccga caaaaaagcc gccgcaacca aatcagctac cgccaaaggc gcgcccacgc
     2881 tccaggaagc cgaggctttc atgaagaaag ccgaggcgca gctcgacgat ctgggtgtgc
     2941 gggccagccg cgcacagtgg gtacaggaaa acttcattac tgacgatacg gagatgatgt
     3001 cggcccaggc gcaggagcgc ttgaccgccg tggtgacgca actcgcgctg gacgcacgcc
     3061 gctttgaaag cctgaagatg ccacccgaac tccagcgcaa gttcaagctg ctgaagctct
     3121 cacttgtcgc gcccgcgccc aacaatgatg ccgaacgcaa ggagctcacc accctcgctt
     3181 cgaacctgga cggcatgtac ggcaaaggca aatactgcaa gccgcaagcg gacggcaaac
     3241 agaagtgcct ttccttaaac gatctcagcc gcatcctggc caccagcacc aatcctgacg
     3301 aacttctcga tgcgtgggtg ggctggcaca agatttctat tcccatgcgg cccaagtaca
     3361 gccgctttgt tgagctctcc aacaagggcg caaaagagct gggctttaaa gatacgggcg
     3421 caatgtggcg gtcgaactat gacatgtcgc ccgagcagtt cagcgcggag gtcgagcgcc
     3481 tgtggcggca ggtggaaccg ttttacgttt ctctgcacac ctatgtccgc aagcagctca
     3541 tcaagaaata cggcaaggtc gcggagcgtc ctgatggcat gatccccgcg catctgctgg
     3601 ggaacatgtg ggcgcaggaa tggggcaaca tttatccgct ggtggcgccc gccaatggcg
     3661 gccagggcta tgacctcacg cagcttttga aagaccacaa ggtcaacgag ctgggcatgg
     3721 tc
//
LOCUS       DASQYP010000183         6823 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_155187, whole genome shotgun sequence.
ACCESSION   DASQYP010000183 DASQYP010000000
VERSION     DASQYP010000183.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 6823)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6823)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6823
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_155187"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(46..1308)
                     /locus_tag="VE783_05880"
     CDS             complement(46..1308)
                     /locus_tag="VE783_05880"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="OFA family MFS transporter"
                     /protein_id="HYX52960.1"
                     /translation="MATDRLPNRWTIAVAAVIMQICLGAVYGWSVFKIPLMRTQHWSE
                     TSVQLNFTLAIAFLGVGTVIGGLWQDRVGPRLVATVAGILYGIGYLVAAWGASAGSLG
                     IIYLGYGVLSGIGMGMGYITPVATLVKWFPDKRGLMTGVAVCGYGAGALVMSPIAARL
                     IPSRGIPFTFAALGIVYFVLVTLAAQFYANPPQGWRLAGWSPTSTVAKAATRYEFTVR
                     EAASTWQFYLLFAMLFLNTSAGIMIISQASPMAQSREFVGMTALQAANMVGLISIFNA
                     LGRVFWAWVSDMFGRARVYLLLFAIQAVVFFVLPQLHSISTFSIAFAIIGLCYGGGFG
                     TMPSFTADFFGAKYMGGIYGWILLAWGAAAIPSPIMIARIHQSTGAFSTAVYIVAAVL
                     AVSIVLPLIARRPDRDALVAREPERRVA"
     gene            1638..3539
                     /locus_tag="VE783_05885"
     CDS             1638..3539
                     /locus_tag="VE783_05885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013913272.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_except=(pos:1887..1889,aa:Sec)
                     /transl_table=11
                     /product="molybdopterin-dependent oxidoreductase"
                     /protein_id="HYX52961.1"
                     /translation="MAGNSHSRLTVPLVRENGRHRPATWDEALDRVAQAFQKSIAKRD
                     PRNFGMFSCSKTTNELNYAAQKFVRTVMGTNNIDSCNRTUHAPSVAGLATVFGMGGGT
                     SSYREIEETSVILLWGSNARETHPIFFHHLLKGVHNGAKLYVIDPRRTSSARWADLWL
                     GLDVGSDVALANAMGREIIVAGLANEKFIKHACSGFDTYRAHVEQYTLERAERETGVP
                     AEAIRKVAHAYARAPRAQLCWTLGITEHHNAVDNVLALINLALLTGHVGRYGSGVNPL
                     RGQNNVQGGGDMGAIPDRLPGFQHIENNELRGRFEQTYGVKLPHKRGWHLSGMFDAME
                     RGELTTLYVLGENPADSEADRHRALKLLGNLEFLLVQDLFYTRTAELAEVVLPAAAGW
                     CESEGTVTSSERRVQRVRRAVPLPAGVRDDMEVIYHLARRLGRDWGTPDSETIWNELR
                     GLSPMHGGMSYKRLEESGGLQWPCYDESHPGEMFLHGRLWADPLIGPRAPFSVVHNDP
                     PVDRLDEGYPIRLTTGRRLDSYNTGVQSKHFASPLRRSAALELSPEDGLRYQLQEGEK
                     VRVSSRRGTVIAPVRFDPGLRPGLAFLDIHAHEQIATNDLTVDAVDPRSGTAEFKASA
                     IRVEKCNEG"
     gene            3541..5397
                     /locus_tag="VE783_05890"
     CDS             3541..5397
                     /locus_tag="VE783_05890"
                     /inference="COORDINATES: protein motif:HMM:NF013662.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase subunit E"
                     /protein_id="HYX52962.1"
                     /translation="MDLHFTNARPLPEERAAVDAELGTAGAAGNGRETRVISNGHARS
                     QRHQLLPVLHAIQSRMGWISPGALNYAAMRLGVAPAEVHGVASFYGMFSLEPAPVTVA
                     HVCDDIACRTRGSEKLCGELEYELGPEGRGCTGMNAAWRRSACLGLCERAPAALVTVA
                     GEAPADKVIAPATVAQIQAAIEAAEHNRLPSLPDELKVEVSVPQAGSPQMRLLNRIGQ
                     SDVITLAGYRRSGGYNALQKALELGPERVLREVGISKLLGRGGAAFPTVKKWEVVRQQ
                     SLQGKTCYLVCNADESEPGTFKDRILMEGDPFAVLEGMTIAAFACGAEKGFIYLRGEY
                     PLAAERISHAIAAARKEQLLGEKILGSGVQFDIEVRRGGGAYICGEETALFNSIEGYR
                     GEPRNKPPFPTDSGLFRQPTAVNNVETLANVPRIILEGGAAYALTATESSTGTRLFCL
                     SGHVRCPGLYEAPMGTTLRALIDLAGGVAGSGRLQAVLLGGAAGTFVSPEELDVPLSF
                     EGTRAIGATLGSGVVMLFDDTVDLRRVLLRIAEFFRHETCGQCVPCRVGVVRQQEALE
                     RLTGGKPLGGVADELALLKEISQAMRDASICGLGQTASSAVDSALKRWRLFS"
     gene            5394..6341
                     /locus_tag="VE783_05895"
     CDS             5394..6341
                     /locus_tag="VE783_05895"
                     /inference="COORDINATES: protein motif:HMM:NF024900.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2Fe-2S iron-sulfur cluster-binding protein"
                     /protein_id="HYX52963.1"
                     /translation="MTKPAPAIQPADAPDLTIPIPRGPVPQLPPAPERRTVELTVDGQ
                     RVRVREGSTILEATRKLGVDTPTLCFLETLTPVNVCRICVVELEGSRTLVPACSRQVE
                     QGMVIHTDSERVRLSRKIVLEFLSSAVDVSTAPQLQQYMQKYGANPERFSAERATVAQ
                     PPKIDNELYVRDYAKCILCYKCVEACGVDAQNTFAIAVAGRGFSAHIATEYEVPLPES
                     ACVYCGNCIGVCPTGALMFKSEFDMRQAGMWDPERQTQTDTICPYCGVGCDLTVHQQD
                     GKIVSVTSPLDHSVTHGNLCIKGRFGWKFVEIYPAERKE"
     gene            6390..6818
                     /locus_tag="VE783_05900"
     CDS             6390..6818
                     /locus_tag="VE783_05900"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52964.1"
                     /translation="MGWIEEIRSRKPDTDATPTAFNDAAMRRWRALGEELRQDVTEFS
                     SQQKGAEFEQPSESSYRVTNSQSGLILDLTADFEARVVRYDYRPLNDNSVGAPEGGML
                     SMRQRQNGRVEFYSADERLTSEETRQVLLEPVLFPPQLAA"
BASE COUNT         1409 a         1971 c         2139 g         1304 t
ORIGIN      
        1 aatggcggcg caccgcctgc gccgccattc gcgtacttag gctcgttaag ccactcgcct
       61 ctcgggttcg cgcgcgacca gcgcatcacg gtcaggccgt cgcgcaatca gcggcaggac
      121 gatggagacc gccagcaccg cagccacaat gtaaaccgcc gtggaaaatg ccccggtgct
      181 ctggtgaatg cgcgcgatca tgataggcga aggaatagct gccgcgcccc atgccagcag
      241 gatccatccg tagataccgc ccatgtactt cgccccgaag aagtctgcgg tgaatgacgg
      301 catggtcccg aagccgccgc cgtagcagag cccgataatg gcaaaagcaa tgctgaaggt
      361 gctgatgctg tgcagctgcg gcagcacaaa gaaaacgact gcctgaatcg caaacagcag
      421 gagatacacc cgcgcgcggc caaacatgtc agacacccag gcccagaaga cgcggcccag
      481 cgcattgaag atcgagatca ggccgaccat gttcgcggcc tgcagcgccg tcattcccac
      541 aaactcgcgc gactgcgcca taggcgaagc ctggctgatg atcatgattc ccgccgaagt
      601 gttgaggaac aacatggcga agagcagata gaactgccac gtgctcgcgg cttcgcgcac
      661 agtgaattca taccgggtgg cggcctttgc aacggtagag gtcggagacc atccggccag
      721 acgccagccc tgtggcgggt tggcgtagaa ctgcgcggcc agcgtcacca gcacaaaata
      781 aacaattccc agcgctgcga acgtgaaggg aataccgcgc gagggaataa gccgcgccgc
      841 aatcgggctc atgaccagag cgcccgcgcc gtatccgcat acggccacac ccgtcatcag
      901 tccgcgcttg tctgggaacc atttcaccag cgtcgccacc ggcgtgatgt aacccatgcc
      961 catgccgatg ccgctgagca cgccatatcc gagatagatg atgccgagcg atcccgctga
     1021 ggctccccaa gctgctacca gatatccgat tccatacagg attccggcta cagttgccac
     1081 cagtcgaggg ccgacccggt cctgccacag gccgccgatc accgtgccga cgcccaggaa
     1141 ggcgatggcc aacgtgaagt taagctgaac cgatgtctca gaccagtgct gcgtccgcat
     1201 cagcggaatc ttgaaaacgc tccagccata aactgcgcca aggcagattt gcatgatgac
     1261 ggccgcaact gcgatcgtcc agcgattggg aagtcggtcg gttgccatga gttcaccttt
     1321 ggatggaacc cgtcagctca ggacggctgt tctatacatc gttaaacgat gcatacggag
     1381 cgtggccgca cagaatcagc tgttccggca ggatttctcg gcgggtgttc cttctgtcta
     1441 gcacagacgc gattggctgg attgtggatg tcctcaggat gcggcgaaac gcgagcagct
     1501 gcgggcctga gctcccgttc cagagcagcg atgggtggca ggcggcgggg gctgaaagca
     1561 tttgattcca gtgtgatgtc cgtccttgac cgggcagctc tggacagcca aactggtgct
     1621 gcagaaaagc gctatctatg gctgggaact cacattctcg cttgaccgtg cctctggtgc
     1681 gcgaaaacgg ccggcatcgc ccggctacct gggacgaagc tcttgaccgg gtggcgcagg
     1741 cctttcagaa atccattgcc aaaagggacc cgcgcaactt cggcatgttc agctgctcca
     1801 agaccacgaa cgagctgaat tatgctgccc agaagtttgt ccgcaccgta atgggcacga
     1861 acaatatcga tagctgcaac cgcacttgac atgctcccag cgtcgccggt ctggcgacgg
     1921 ttttcggcat gggcggcggc accagttctt atcgtgagat cgaagagacc agtgtcatcc
     1981 tgctatgggg atcaaacgcg cgtgagacgc atcccatctt tttccatcac ctactcaagg
     2041 gcgtgcacaa cggggcaaag ctttatgtga tcgatccgcg ccgcaccagc tctgcgcgct
     2101 gggccgatct ctggctcggg cttgacgtag gttcggacgt cgcactggcg aatgccatgg
     2161 ggcgcgagat catcgtcgcc ggcttggcga atgaaaaatt catcaagcac gcgtgcagtg
     2221 ggtttgacac ttatcgcgcc cacgttgagc agtacacgct ggagcgggca gagagggaaa
     2281 ccggtgttcc ggctgaggcg atcaggaaag tagctcacgc ttacgcgcga gcgccgcgcg
     2341 cgcaactctg ctggaccctg ggcatcaccg aacaccacaa cgcagtggat aacgttctgg
     2401 cgctgatcaa tctggcgctg ctcacgggac acgtgggccg ctacggcagc ggcgtgaatc
     2461 cgctgcgcgg acagaataat gtccagggtg gcggagatat gggcgcgatt ccggatcgcc
     2521 tgcccggctt ccagcacatt gagaataacg agttgcgtgg ccgattcgag caaacctatg
     2581 gcgtgaagct cccgcacaaa cgcggctggc acctgagcgg gatgttcgac gccatggagc
     2641 gcggcgaact cacaactttg tacgtgctcg gcgagaaccc cgcagattct gaagccgacc
     2701 gccatcgtgc gctgaagctc ctgggtaatc ttgagtttct tctggttcaa gatcttttct
     2761 atacgcgcac ggctgaactc gctgaggttg tgcttcccgc tgccgctggc tggtgcgaga
     2821 gcgagggcac tgtgacgtca agtgaacgac gggtgcagcg ggtccgccgg gctgtgccgc
     2881 taccggctgg agttcgcgac gacatggaag ttatttacca tctggcgcgt cgtcttggcc
     2941 gcgactgggg cacgcccgat tcagaaacca tctggaacga gctgcgcggc ctaagcccaa
     3001 tgcacggcgg catgagctac aagcgtctgg aagaatcagg cgggttacag tggccgtgtt
     3061 atgacgagtc ccatccggga gagatgtttt tgcatggccg tctgtgggct gatccgctca
     3121 ttggtccgcg cgcgccgttc agcgtcgtgc ataacgaccc gccggtggac cgattggacg
     3181 agggctatcc cattcgtctc accacaggcc gccgtctcga ctcgtacaac accggagtac
     3241 agagcaagca cttcgcttca ccgctgcgtc gcagtgccgc attggaactc tctcccgaag
     3301 acgggttgcg ttaccagttg caggaaggcg agaaagttcg tgtgagttcg cggcgtggaa
     3361 cagtgattgc tcccgtgcga ttcgatcccg gtctgcggcc tgggctggcg ttcctcgata
     3421 tccacgcaca cgagcagatc gcgacgaatg atttgaccgt ggatgcggtc gatccccgct
     3481 ctggaactgc cgagttcaaa gcgtcggcga ttcgggtcga gaagtgtaac gagggctaat
     3541 ttggacctgc atttcaccaa tgcgcggccg cttccggaag agcgcgccgc cgtggatgcg
     3601 gaactcggca ccgcgggtgc ggctggcaat ggccgcgaga cgcgggtaat ctcgaatggc
     3661 catgcgcgaa gccagcggca ccagctatta ccagtgctgc acgcgattca gagtcgtatg
     3721 ggatggatct caccgggagc gctgaactac gcggccatgc gcctgggtgt tgccccggct
     3781 gaagtgcatg gggtggcctc attttacggt atgttctcgc ttgagcctgc gccggtgact
     3841 gtggctcacg tttgcgatga cattgcctgc cggactcgcg gatcagaaaa gttatgcggt
     3901 gagctggagt acgaactcgg ccctgaaggt agagggtgta caggtatgaa cgcggcctgg
     3961 aggcggagcg cgtgccttgg actttgtgag cgcgcaccgg ctgctttggt gacggtcgcg
     4021 ggggaggcac cggcggacaa agtgattgct cccgcaactg tcgctcagat tcaggccgcg
     4081 atagaagccg ccgagcacaa tagactgccg tctcttccgg atgaactcaa agtagaagtc
     4141 tcagtccccc aggcgggctc tccgcagatg cgccttctaa atcgcatcgg ccagtccgat
     4201 gtcatcactc tcgccggcta tcgccgcagc ggtggttaca atgccctgca aaaagcgttg
     4261 gagcttggcc ctgaacgcgt gctccgcgag gtaggtattt ccaaactact cggtcgcggg
     4321 ggtgcggcgt tcccgacggt gaaaaagtgg gaagtcgttc ggcagcagtc actgcaggga
     4381 aaaacgtgct atctggtctg caatgccgac gaatcagagc ccggaacctt taaagaccgg
     4441 attttgatgg agggcgaccc gttcgccgtg ctggaaggaa tgacaatcgc ggcgttcgcg
     4501 tgcggagcgg aaaagggatt catttatctg cgcggcgaat atccgttggc agcggaacgg
     4561 atcagtcacg ccattgccgc agcgcggaaa gagcagttgc tgggagaaaa aattctggga
     4621 agcggagtgc agttcgatat tgaagtgcgg cgcggcgggg gtgcatatat ctgtggagag
     4681 gagacggcgc tgttcaactc tatcgagggc tatcgcggcg agccgcgtaa caaaccgcca
     4741 ttccctacag attcgggtct gttccgccag cccacagcag tgaataatgt tgaaacgctg
     4801 gccaacgtgc cgcggatcat tctggaaggc ggcgcggcgt atgcgcttac tgccactgaa
     4861 agctccacag gcacacgtct cttctgtctt tccgggcatg tgcgctgtcc cgggctctac
     4921 gaagctccga tgggtaccac gttacgagca ctgattgatt tggcgggcgg cgttgccgga
     4981 tcgggcaggc tgcaggctgt gctgctgggc ggcgctgcag gaacattcgt ctcaccggaa
     5041 gagctggacg tgcccctcag ctttgaaggc acgcgcgcca tcggcgcgac gctcggttcg
     5101 ggcgtggtga tgctgtttga cgacacggtg gacctgcgcc gcgtgctgct gcgcattgct
     5161 gagttcttcc gccacgagac gtgcgggcaa tgtgtcccat gccgggtggg ggtagtacgg
     5221 cagcaggagg cgctcgaaag gcttacgggc ggaaagccgt tgggcggagt tgccgatgaa
     5281 ctcgccttgc tgaaagagat ttcgcaggcc atgcgcgatg cctcgatctg cgggttgggc
     5341 cagaccgcct cgagtgccgt tgattccgcg ctgaagcgct ggaggttgtt ctcatgacca
     5401 agcccgcgcc ggcgattcag cccgctgatg caccggatct cacaataccc attccgcggg
     5461 gacccgtacc acagctcccg ccagcaccag aacgccgcac ggtcgaactc acggttgatg
     5521 gccagcgcgt ccgtgtgcgg gaagggtcaa ccattctcga ggccacacgc aagctcggcg
     5581 tcgatacacc gacgctctgt ttcctggaga cgcttacgcc ggttaacgta tgtcgcattt
     5641 gcgtggtgga actggaagga tcgcgcacgc tggtgccggc gtgctcgcgt caggttgagc
     5701 agggcatggt gattcacacg gactcggaac gtgtacggct cagccgcaag atagtgctgg
     5761 agttcctgag ttcggccgtg gacgtgtcga cagctcctca gcttcaacaa tacatgcaga
     5821 agtatggcgc gaatccggaa cggttcagtg ccgagcgcgc cacagtcgcg cagccgccca
     5881 agatcgacaa tgaactttat gtccgcgatt acgcaaagtg catcctgtgc tacaagtgcg
     5941 tggaggcctg cggcgtggat gcgcagaaca cgttcgccat cgctgttgcc gggcgtggct
     6001 tctcggcaca cattgccacg gaatacgagg tcccactgcc tgaatcagcg tgtgtatatt
     6061 gcggcaactg cattggcgta tgtcccacgg gcgcgttgat gttcaaaagc gagttcgaca
     6121 tgcgacaggc aggaatgtgg gaccctgagc ggcagaccca gacagacacg atctgcccat
     6181 actgcggagt tggctgtgac ctcacggttc accagcagga tggaaaaatc gtgagcgtaa
     6241 cttcgcctct cgaccattca gtcactcacg gcaatctctg catcaagggc cggttcggat
     6301 ggaagttcgt agagatttat ccggcagagc gcaaagagta actcgcgcaa gcatctctcc
     6361 ccttcctgaa tctcatccca tccattgcca tgggatggat tgaagagatt cgcagccgga
     6421 agcccgacac ggacgcaacg ccaaccgctt tcaacgatgc agccatgcgg cgctggcgcg
     6481 ctctgggaga agagctgcga caggacgtca ccgagttcag ctcgcagcag aagggcgctg
     6541 agtttgagca gccaagtgag agcagttatc gagttaccaa ctcacaatcg ggattgattc
     6601 ttgatctgac agccgacttc gaggcgcggg tggtgcggta cgactatcgc ccgctgaatg
     6661 acaacagcgt cggggcaccc gaaggtggaa tgctctcaat gaggcaacgg cagaacgggc
     6721 gcgtggagtt ttattctgcc gatgagcggc ttacctcaga ggaaactcgg caggtgttgc
     6781 tggagccggt gctgtttccg cctcagctcg cggcctgacc tga
//
LOCUS       DASQYP010000184         2077 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_224221, whole genome shotgun sequence.
ACCESSION   DASQYP010000184 DASQYP010000000
VERSION     DASQYP010000184.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 2077)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2077)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2077
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_224221"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..417
                     /locus_tag="VE783_05905"
     CDS             <1..417
                     /locus_tag="VE783_05905"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52965.1"
                     /translation="GRDKLLTGQTEHDWPNTFRTARFIPAVEYIQASRARMLAMEQFA
                     KTIAPFDVIVAPTNSTQLLVTNLTGHPAVILPNGFRGDDAPKPHVNDSGDIDSGGPGT
                     PVSLTFLGNLYGEAKMLALAKAYQDATDFHLKHPKL"
     gene            complement(873..>2077)
                     /locus_tag="VE783_05910"
     CDS             complement(873..>2077)
                     /locus_tag="VE783_05910"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52966.1"
                     /translation="DITPLQQYKPEIAQADVHLYNPEPANHTVFGGGFFGGPFRGQNP
                     PSGAVIYYSLKNAIKKPGGEKPAAAGAGGAAPASTSGAPQTAAAGEAKSAAEASKEQP
                     AGGKAGTAETSKSEAPKSEGKADAEKPAPITLEILDQQGKVIRKYPPKKPAGGDEGDD
                     EGFGFRGPERGLPTEAGLNRFVWDMRYEGASRVPKSPLWGGGTDGPEAVPGQYQVRLT
                     VQGKSYTAPLEIKADPRLKVTQADLQKQLDLLLKIRDSVTQAHDTINQIREVRGQIEA
                     LNKRLTGQPQAKAVADAGKALDKKMTEVEEVLIQTKAKSGQDVLNYPIRLNNYLVALG
                     GVVESADTQPTQASIDVYNMLSKQLAEQMEKWKQILATDIPAYNNTVKQQDVPAIVLK
                     KDDEKGTP"
BASE COUNT          333 a          715 c          558 g          471 t
ORIGIN      
        1 ggccgtgaca aactcctcac cggccagacc gagcatgact ggcccaacac cttccgcacc
       61 gcgcgcttta ttcccgcggt ggaatacatt caggccagcc gcgcccgcat gcttgccatg
      121 gagcagttcg ccaagaccat cgcgccgttc gacgtgatcg ttgcgcccac caacagcacg
      181 cagctgctgg ttaccaatct caccggacac ccggcggtga tcctgcctaa cggcttccgt
      241 ggtgacgatg ctcccaagcc gcacgtgaac gacagcggcg acatcgactc cggcggtccc
      301 ggcacgcccg taagccttac cttccttggc aacctttatg gcgaagcgaa aatgctcgcg
      361 ctcgccaagg cctaccagga cgcgacggac ttccatctga agcatccgaa gctgtgaggc
      421 acacttcacg gagatgcttg agcgagaatc aattggggtt gggcacctgt ggtccggtga
      481 gtacggtttc tttttatgtc gctccgcctt cggctccgct ccggcctacc ggcagtgcgg
      541 agttgtcgtc attcgcatcc tacccagccc ttattcctca gctcgctaac gctcgcctcg
      601 gaaacggact gggctaactt atgccgcgcc tacggcgctg gggtgtgctg agtcggagag
      661 attttgtggc taccgttcac ggtgataatg ccgcggacaa agagccagat gttccaacga
      721 tccctactgg caactcgcgc tgcgctttgc tccatgtctc cgtgctgaaa tcgaatttct
      781 tcaaccactc tccccctcgt gtttcattcc tgaatactga aggccgccca atctcccggg
      841 cggcctcctg atcattcatc tgttaaccgg cgctacggcg tccctttctc gtcgtccttc
      901 ttcaacacaa tcgccggcac gtcctgctgc ttcactgtgt tgttgtaggc cggaatgtca
      961 gtggccagaa tctgtttcca tttctccatc tgctccgcca gctgtttgct cagcatgttg
     1021 tagacgtcaa tggaggcctg cgtcggctgc gtgtccgcgc tctccaccac gccgcccagc
     1081 gccaccagat agttgttcag ccggatggga tagttcagca catcctgtcc gctcttggcc
     1141 ttggtctgga tcagcacttc ttccacctcg gtcatcttct tgtccagcgc cttgcccgcg
     1201 tcggccacgg ccttggcctg cggctggccg gtgagccgct tgttcagcgc ttcaatctgg
     1261 ccgcgcacct cgcgaatctg gttaatggtg tcatgcgcct gggtcacgct gtcgcgaatc
     1321 ttcagcagca ggtcaagctg cttctgcaga tcggcctgcg taactttcaa tcgcggatca
     1381 gccttgatct ccagcggcgc tgtgtagctc ttgccctgca ccgtcagccg gacctgatac
     1441 tggcccggca cggcttccgg tccgtcggtg cccccgcccc acagcggcga cttcggcacc
     1501 cggctcgcgc cttcatagcg catgtcccaa acaaagcggt tcagcccggc ttccgtgggc
     1561 agcccgcgtt ccggccctcg gaacccgaag ccctcatcat cgccttcatc accgccggcc
     1621 ggcttcttcg gcggatactt gcgaatgacc ttgccctgct gatcaaggat ttccagcgta
     1681 atcggtgccg gcttttcggc atctgccttt ccttcggact tcggcgcctc cgattttgaa
     1741 gtttccgccg tgccggcttt cccgcccgca ggctgttctt ttgaagcttc agccgccgac
     1801 ttcgcctcac ccgccgccgc ggtttgcggc gcaccagaag ttgaagccgg agcagcgcca
     1861 ccggcacccg ccgccgctgg cttctcgccg cccggcttct tgatcgcgtt cttcagcgag
     1921 taataaatca ccgccccgct cggcgggttc tgccctctga acggaccgcc aaagaatccg
     1981 ccgccaaaca ccgtgtggtt ggccggctca gggttataga gatggacgtc ggcctgcgcg
     2041 atctccggct tgtactgctg cagcggagta atgtcgt
//
LOCUS       DASQYP010000185         8021 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_282124, whole genome shotgun sequence.
ACCESSION   DASQYP010000185 DASQYP010000000
VERSION     DASQYP010000185.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 8021)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8021)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8021
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_282124"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1223)
                     /locus_tag="VE783_05915"
     CDS             complement(<1..1223)
                     /locus_tag="VE783_05915"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52967.1"
                     /translation="MSWQLRLLILAVLLAFAASLHGQNVTVLDTPTTTTLWAGTTNFV
                     TAGLSSLTSPASGVILSGTAISKFTGKPERHLWYGDASNGFCRIDPELDDPDLSQPSP
                     GIGRFNNIITTCVGSIQAGAFAPMQVTYDASTQTLYAADIPRTANGIIRMHYLPAGDN
                     GRGAIDPIHIESLMGSQGTRNAAGGCPVVTDPRNGATPVQMFATALGPDGNLYVGWAR
                     NGTIARIPHPATFDPGNPADCASIDVPIFASDARLGAGGAAGHTFGLAWIGHTLFGAD
                     NISPWFKDNADQCLTPANGNVRCGPVAGAGIEVLAAFAPGPQAGIISDFTYNGPNPTF
                     PGNTLYALTLGGAVRISNVTDVLHMSVSPQFGGAFCFITGATIDTSDLANETVYVGAD
                     CTQGTINGAASIWQV"
     gene            complement(1802..2917)
                     /locus_tag="VE783_05920"
     CDS             complement(1802..2917)
                     /locus_tag="VE783_05920"
                     /inference="COORDINATES: protein motif:HMM:NF025885.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54 dependent transcriptional regulator"
                     /protein_id="HYX52968.1"
                     /translation="MHSSPVLDFFSHPAAAIAVGAEVPSAEAPRCEQVENDIFFLAAS
                     PAMQKIRAQVAQVARVDIPVLLLGESGVGKEVLARLVHKLSRRSGRQVMKVNCAAMPL
                     DLLESELFGHEAGAFTGAMRPKPGLLELCDKATLFLDEIGEMNPLLQAKLLHVLQDGK
                     FTRLGGRAPLSSDFRVIAATNINVEEAIGARAFREDLYYRLNAFAIQVPPLRERKEEL
                     PMLLRHFITQFSYQYNCEPPECSPNLVRACLRHSWPGNLRELGNFVKRYMVLQDEALA
                     ISEIEQKGAISAVMPDVAEQAAHARPGAGLKTILQELKEKAEPRIIERALIATRWNCK
                     MAATHLKISYKALLYKMKQYHIFPPGVSGPGLRSAHS"
     gene            complement(3444..4475)
                     /locus_tag="VE783_05925"
     CDS             complement(3444..4475)
                     /locus_tag="VE783_05925"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="YncE family protein"
                     /protein_id="HYX52969.1"
                     /translation="MKRSIALVGLGLVLFSAVVLFASRSKSPRAAGSPRLLKQVGSIH
                     VPGPKGERFDYLVIDPARRLLFSTHLGAGLLYAIDLGSNKVVKTFGDLPGIEGVEIAP
                     DVNKAYTSNWKENKIGVIDLEQMKLIKKLSTESKPDGIAYAAPFHKIYVSDERGKAEA
                     VVDVRKDEVIATLHFASETGNPRFDPVSRRLYLNLQDRNMIAEIDPVTDKEVAEYPVG
                     RCKGNHGMALDSEHRLAFLSCEDNDLMTVFRLDTHQPIAYFPQAKGGDVIAFDAGLKR
                     IYVACYSGAISVFQEDDPTHFRKLGDVPVQKKVHSLAINPENHRVYAPEQEENGAPAA
                     KIAIFEVVP"
     gene            complement(5102..>8021)
                     /locus_tag="VE783_05930"
     CDS             complement(5102..>8021)
                     /locus_tag="VE783_05930"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52970.1"
                     /translation="ARQHIPLGSGTVKVQGSGVPANHTVWVAGRQIPVDPKGNFIAEE
                     ILPNGTHTVEVAVLDEAGNGSLFLRDLEFKSRDLFFVGVADLTLSKNSVSAAEKLQQG
                     DNAAQPVDSPFDGRLAFYLNGKVTEKWHLTASADTREGPVKDLFSNFLDKSPDELFRR
                     INPDYYYPSFGDDSVVEEMAPTLGKFFVKASRGQDYGMWGNFKVNYVANDLAHVDRGL
                     YGANAHFGSEPITTSGERKISLDGFAAQPGTLPSYEQFLGTGGSLYFLHHQDILTGSE
                     SVRIEVRDKVSGIVNGVVNLRPNVDYDIDYIQGRLLLSEPLSSTASDNLLVRTSGLSG
                     DQSYLVVRYEYTPGLDNLDQMAVGGQGSYWLNNYVKLGLTANSNDGDSTGRLGAADVT
                     VRKSANSWFKVQAGRTTGLLSPSLQSNDGGFNFQGPDDQFFTSSNANAYRAEMSVGLG
                     DFIKGRDGRFAFYTQKLDAGYSAPGQLTVKDTEQYGGMFKMPVSSRLSLMAKGDQRTE
                     VQGLDSRAVELDLAYKLTNKWSFSGGVRDDMRKDNSTIVPLTQEQGERTDAVAQLKYS
                     PNDTWNTYLFGQDTVAATGNRPDNSRMGLGGSYRLTKRFRIDGEASDGNLGPGGKIGT
                     TFLYSERTSLYLNYSLENERTDNDQLVHSGSWGNLVSGVKTRLSDSSSVYAEERYQTG
                     AGQSGLTHATGINLVTKERWNFGGSAEFGNLFDSETGAETNRKAAGIHMGYGLDKIQF
                     SSAVEFRRDDAQQPDLSHVIQSVLLLRNNFKYQLTPSWRLLGKLDYSISDSSLGDFST
                     GGYTEGVVGYAYRPVQNDRLNALVKYTYFYNVPSTDQLGAQNVLTQFLQKSHIASVDA
                     TYDLTASWSVGGKYAYRMGEASLDLVNPTFFDNTAQLAVLRLDYRFLKQWDTLAEVRQ
                     LGLPDINQNRRGVLTAIYHHLSKNLKAGVGYNFTDFSDELTDLRYNHRGIFVNIIGTK
                     "
BASE COUNT         1663 a         2185 c         2389 g         1784 t
ORIGIN      
        1 ttgacctgcc agatggatgc cgcgccatta attgtgcctt gggtgcagtc tgcgccgacg
       61 taaacggtct cgttcgccag atcgctggta tcaatggtcg cgccagtgat gaagcagaac
      121 gctccgccga actgcggcga aactgacata tgaaggacat cagtgacatt gctgatgcgg
      181 accgctcccc cgagggtgag tgcgtagagc gtattcccgg ggaaagttgg gttggggccg
      241 ttataggtaa agtcgctgat gattccggcc tgtggaccag gtgcaaacgc ggccagaacc
      301 tcaatgccgg cgccggcaac cggaccgcag cgaacattgc catttgccgg agtgagacac
      361 tggtcggcat tgtccttgaa ccatgggctt atgttgtccg cgccgaagag cgtgtggccg
      421 atccaggcga ggccgaaagt atgtcctgca gctccgccgg cgcccagtcg cgcgtcggat
      481 gcgaagatgg gaacgtcaat actggcgcag tctgcgggat tgccaggatc aaacgtagcg
      541 gggtgcggaa ttcgcgcaat ggttccattc ctcgcccagc cgacgtagag attgccatcc
      601 ggacctagtg cagtagcaaa catctgcacc ggagtagcgc cgttccgcgg gtctgtgacc
      661 actgggcatc cacctgccgc gttccgcgtc ccttgactgc ccatgagcga ttcaatgtgg
      721 atcgggtcaa tggcgccgcg gccattatcg ccagcgggca ggtaatgcat gcgaataatg
      781 ccgttcgctg tgcgcggaat gtcggccgca tacagcgtct gcgtgctcgc atcgtaggtc
      841 acctgcatgg gcgcaaatgc gcccgcctga attgatccga cgcaggtggt gatgatgttg
      901 ttgaaccgtc cgatcccggg agagggttgc gatagatcgg gatcgtcgag ttcaggatcg
      961 atgcggcaga agccgttgct ggcgtcgccg taccacaggt gacgttccgg cttgccggtg
     1021 aatttgctga tggccgtccc ggaaagaatc acgcccgaag ccgggctggt cagcgacgac
     1081 agtccggctg taacgaaatt cgtggttccc gcccacagcg tggtcgtggt aggcgtgtcg
     1141 agcacggtca cgttttggcc atgcagagat gccgcaaacg caagcagcac ggccaggatc
     1201 agcaaccgca gttgccaaga cacaggtaac tgcgtgttgg ttagctcgta gtgcgctgtt
     1261 tgatagtcac ttctcatcca acttcgtcct tctgtccggc agcttttggt tggctgttcc
     1321 gccggactct gatgtttccc cggaagagcg cagagcggtt cgttcccgct ttgtcgccgc
     1381 gagccatggg agtcttgttt aaaacccgtg tgcctgtacg gacagcgaat gcacaattca
     1441 taccggcaca gatcgaatgc actcagggga ggacactcga tctgctcaga acaaagcagc
     1501 tgaagtacca agcggcgaat tcatgtgcga tcccggcgcc cgggaaagct tatttatgtt
     1561 tcctttctgc ggtttagccg gttgagcagg aagctctagc ctgctctcca tcgacgaagt
     1621 ttctgagtgc ttttggaaga tggcttccat tgccgcagtg gaagcggagt tccactcggc
     1681 ggcgaactcc cgctgcagtt catggctgaa tgagaagaaa gttgagtgtg atggcgggca
     1741 aaaagtaaaa aggcgcatcc gaaacgatgc gccttatcgt gcggttctgt gcaggcgaaa
     1801 tttagctgtg tgcgctgcgc aagcctggac cgctcacgcc cggcggaaag atgtggtact
     1861 gcttcatctt gtaaagaagc gctttgtagc tgatcttcag gtgcgttgcc gccattttgc
     1921 agttccagcg cgtggcgatc agtgcccgtt caatgatcct gggctcggct ttttctttaa
     1981 gctcctgcaa aatcgtcttt aatcctgccc ctggacgcgc atgggctgcc tgttcagcca
     2041 cgtcgggcat gacggcggaa attgcgcctt tctgctcaat ctcactaatg gccagcgcct
     2101 catcctgaag caccatataa cgtttcacga aattaccaag ttcgcgcagg tttcctggcc
     2161 acgagtgccg cagacaggcc cgcaccaggt ttggagaaca ctcaggcggc tcacagttgt
     2221 actgatagga gaactgcgtg atgaagtgcc ggagcagcat tggaagctct tctttgcgct
     2281 cacgcagcgg aggaacctgg atggcgaagg cgttcagccg gtaatagaga tcctcgcgga
     2341 aagctcgcgc gccaatggct tcttccacgt tgatattggt cgcggcgatc acgcggaaat
     2401 cggagctgag cggcgcccgt ccgccgagcc gcgtaaattt gccgtcttgc agcacgtgca
     2461 gcagtttggc ctgcagcagc ggattcatct cgccaatttc gtccaggaat aaagtggctt
     2521 tatcgcagag ctccagcaat cccggcttgg gacgcatggc gcccgtaaaa gcgccggctt
     2581 catggccaaa gagctcgctt tccagaagat caagcggcat ggcggcgcaa tttactttca
     2641 tcacctgccg gccggagcgg cgcgagagct tgtgcaccag ccgggccaat acttccttgc
     2701 caacgccact ttcaccaagt agaagaactg gtatgtccac acgagccacc tgcgccacct
     2761 gcgcccggat cttttgcatt gcaggactgg cagccaggaa gaagatgtcg ttttccacct
     2821 gctcgcagcg gggagcttcg gcagaaggca cttcggcgcc aacagcaatg gcagcggccg
     2881 ggtgactaaa aaaatcgaga acaggagaag aatgcatggg gaacccctcg cgcttcaatc
     2941 attagccgca gaaagctagt tacagtcgat cacgcttcag tcggctttct tattttcatg
     3001 tgcgctccac aagcttgttg cgcgaggggg caggctggga agcctgacca aactacaagc
     3061 acgtgtgtat tcaggaatct ttatttgaac tgcacttgtt cctgtttcgc acagaacccg
     3121 atttcgggtg cctcaatgta gcgttccggc gagcaaggag gcaaacaatt tcttcgcgat
     3181 tgtgcgccgt gtagccgccc aggcctgtat gtcttacaaa attaagagca tagcccttcg
     3241 gtgggtatac caacctcaca gccggaccac ccggaaacat tagcgtcttt aataaacctt
     3301 gctgttacag gcacttacaa cccacagaac gctctttttc taatattcct ctgcaggact
     3361 tgcacagtct tgcgccacgc agatattggt tttggaaaca atgaccgggc ggcctcaaag
     3421 aaatatttcg atgggaggag gcgtcacggc acgacttcaa agatcgcgat cttcgccgcc
     3481 ggagcgccgt tctcttcctg ttctggcgcg tacacacgat gattctcagg attgatggcc
     3541 aggctgtgga ccttcttctg gacgggaaca tcccccagct tgcggaagtg agttggatcg
     3601 tcttcctgaa acactgagat tgctccgcta tagcatgcga cgtagatgcg tttcaggccg
     3661 gcatcaaacg cgatcacgtc accgcctttg gcctggggaa agtaggcgat gggctggtgg
     3721 gtatcgaggc ggaagacggt catgaggtcg ttatcttcac aagaaagaaa tgccagccgg
     3781 tgctcgctat cgagcgccat tccatgattg cctttgcacc tgcccaccgg atattccgcc
     3841 acttctttgt ctgtaaccgg atcgatttcg gcaatcatgt tcctgtcctg aaggttcaaa
     3901 tacaggcgcc tggagactgg atcgaagcgc gggttaccgg tttcgctggc aaagtgaagc
     3961 gtggcaatga cctcgtcttt tcttacgtcc accacggctt cagccttgcc gcgttcgtca
     4021 gaaacgtaaa tcttgtggaa aggagcagca taggcaatgc catcaggctt ggattcagtg
     4081 gaaagctttt taatgagctt catctgctca aggtcaatga cgccgatttt gttttccttc
     4141 cagttagagg tgtacgcctt gttcacatcg ggcgcgattt ccactccttc aatgcccggc
     4201 aggtctccga aagttttgac caccttgttg ctgcccaggt ctatggcata gagcaggcca
     4261 gcgccaagat gggtggaaaa aagcaggcgg cgcgcgggat caatgaccag atagtcgaaa
     4321 cgctcgccct tgggacccgg cacgtggatg gagccaacct gcttgagaag acgtgggctg
     4381 ccggctgctc gcgggctttt gcttcgagat gcaaagagca ctacggcaga aaacagaacc
     4441 agcccgagcc caaccagtgc gatggagcgc ttcatggatt cctccgctac tcattctacg
     4501 gtgccgagtc aggagggttt cgatttgcgg gaatcatctt gtgtggcgga ttgaattagc
     4561 caaaccgaaa cacgcacagg tacgcggagc cgggcagacg tattttcgct tcaggagtcg
     4621 actttcctgt tgacagagga gcggcacaaa ggcgaatatg gtaaagtttg cccaggcgaa
     4681 acgggcgcga tgccgccccc ggaaagatct ttgacaatcc agctgttagc ttctggctgc
     4741 caacctgaag ctgacggaac tattagcaaa gtggtaaacc tgggcagccg ttgcaaggcg
     4801 attgtgaccc ttgggtgacg caggaaaaag gttgggtgac cctgtggaaa actctgggtc
     4861 accctgtgga aaagtatggg tgatccaagg gccgaaatta agcaagtctc tttgtttgca
     4921 tcagaacacc aaaaaaccgg ggcgcccccc tctaacgttt actaagttat cactttatgg
     4981 tcagcgctcc ggttggcccc ttttcgggtt cgcgagtagg ccggggacca aacgcaaggt
     5041 ccctccggcc tactcgcgac ggggttgtag ctagcaacag gtcccgtaat ccaacccagc
     5101 gttacttggt tccgatgata ttaacgaaga tgcctcgatg gttgtagcgg aggtcggtca
     5161 gctcatcgga gaagtcggtg aagttgtacc ccacgccggc tttcaggttc ttactgaggt
     5221 gatggtagat ggcggtcaag acgccgcggc ggttttgatt gatatccggg aggccaagct
     5281 gccgcacttc ggccagggtg tcccactgtt tcaggaaccg gtagtccagc cgcaacacgg
     5341 cgagctgcgc ggtattgtcg aagaaagtcg gattcaccag gtccaggctg gcctctccca
     5401 tgcggtaggc gtacttgccg ccgaccgacc agctggcagt gaggtcgtaa gtagcatcga
     5461 ctgaggcgat gtgactcttc tgcagaaact gcgtgaggac gttctgcgct cccagttggt
     5521 cagtgctggg gacgttatag aaatacgtgt acttaaccaa cgcgttcagc cgatcgttct
     5581 ggaccgggcg gtatgcgtat ccgaccacgc cctcagtgta gccgccggtg gaaaaatcgc
     5641 cgagtgagct atcactgatg gagtaatcca gcttgccgag cagccgccag ctgggcgtga
     5701 gctggtactt gaagttgttg cgcaacagca acacgctctg gattacatgc gaaaggtcgg
     5761 gctgttgagc gtcgtcgcgg cggaattcca ctgcgctgga gaactgtatc ttgtcaagac
     5821 cgtatcccat atgaattccg gcggccttgc gattggtctc agcaccggtc tccgagtcaa
     5881 acaggttgcc gaactcggcg ctgccgccga aattccagcg ctctttggtc acgaggttga
     5941 ttccggtggc gtgcgtgagg ccgctctgcc ccgcgccagt ctggtagcgt tcttcggcgt
     6001 agacgctgga actatcagaa aggcgcgtct ttacgccgga gacgagatta ccccagctgc
     6061 cgctgtggac gagctgatcg ttgtcagtgc gctcgttctc aagcgaatag ttgaggtaga
     6121 ggctggtgcg ctcggaataa agaaaggtgg tgccgatttt tccgccggga cccaggtttc
     6181 cgtcggaggc ttctccatca atgcgaaagc gctttgtgag tcgataggag ccgccgaggc
     6241 ccatgcggct gttatccgga cggtttcctg tggccgcgac cgtgtcctgg ccgaagagat
     6301 acgtgttcca ggtgtcattg ggactgtatt tgagctgcgc gaccgcgtcc gtacgctcgc
     6361 cctgctcctg agtgagcgga acaatagtgg agttgtcctt gcgcatatcg tcacggacgc
     6421 cgccgctgaa gctccatttg ttggtgagct tgtaggctag atccaattcc acggcgcgcg
     6481 aatcgagccc ctggacttct gtcctctgat cgcccttggc catcaggctc aggcggcttg
     6541 agaccggcat tttgaacatg ccgccgtatt gctcggtgtc tttgacggtg agctgtcccg
     6601 gcgcggagta acccgcatcg agcttttggg tgtagaacgc gaaacgaccg tcgcgcccct
     6661 tgatgaagtc gcccagccct acgctcattt ccgcgcgata ggcgttggcg tttgaactgg
     6721 taaagaactg atcgtcaggg ccctggaaat tgaatccgcc atcgttggat tgcagcgatg
     6781 gagaaaggag accggtggtg cggcctgcct gcaccttgaa ccaagaattg gcgcttttgc
     6841 gcacggtcac atcggcggcg ccgagtcgcc cggtggagtc accatcattg gagttagcgg
     6901 tgaggccgag ctttacgtag ttgttcagcc agtaactgcc ctggccgccg accgccattt
     6961 gatccagatt gtcgaggccg ggcgtgtact catagcgcac gaccagatag gactggtctc
     7021 cgctcaagcc gctggttcgc accagcaggt tgtcgctggc tgtggatgag agcggttcag
     7081 aaagaagcag ccggccctgg atgtagtcaa tgtcgtaatc aacattgggc cgcaggttga
     7141 ccacgccgtt gacgatgccc gaaaccttgt cgcggacttc aatgcgcacg ctttcggagc
     7201 cggtgaggat gtcctggtgg tgcaggaaat agagcgagcc gccggttccg aggaactgct
     7261 catagctggg caaagttccg ggctgggcgg cgaagccgtc gagtgaaatt tttcgctcgc
     7321 cggaggtggt gatgggctca gagccaaagt gcgcgttggc gccgtacaag ccgcggtcaa
     7381 catgcgccag atcgttggca acgtaattga ccttgaagtt gccccacatt ccgtagtcct
     7441 ggccgcggct cgctttcacg aagaacttgc ccagcgttgg ggccatttct tccaccacgc
     7501 tgtcgtcgcc gaaagagggg taatagtagt cgggattgat gcggcggaac aactcgtcgg
     7561 gtgacttgtc aaggaagttg ctgaacaggt cttttaccgg gccttcacgg gtatctgcgc
     7621 tggcggttaa atgccatttc tcggtcactt tgccgttcag gtagaacgcg agccggccgt
     7681 cgaatggcga atccacgggc tgcgcagcat tgtcaccctg ctgcagtttt tccgcagccg
     7741 atacgctgtt cttcgataac gtcaaatcgg caacgccgac aaagaagagg tccctggatt
     7801 tgaactcaag atcgcgcaga aataacgagc cgttgccggc ttcgtcaagc acggcgactt
     7861 ctaccgtgtg cgtgccgttt ggaaggattt cttctgcaat gaagttgcct ttggggtcaa
     7921 ccggaatctg gcggcccgct acccaaaccg tgtggttcgc gggcacaccg ctaccctgca
     7981 cttttaccgt gccgctgccg agcggaatat gctggcgcgc c
//
LOCUS       DASQYP010000186        14822 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_239672, whole genome shotgun sequence.
ACCESSION   DASQYP010000186 DASQYP010000000
VERSION     DASQYP010000186.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 14822)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14822)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14822
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_239672"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            208..1197
                     /locus_tag="VE783_05935"
     CDS             208..1197
                     /locus_tag="VE783_05935"
                     /inference="COORDINATES: protein motif:HMM:NF025910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HYX52971.1"
                     /translation="MLVISLALLMVTIAAGTANAQPQSTDSLSPAIAALYHSGSYDAA
                     ADQLRARLARNANDALSNYWLGRCLFEMDDFDGAISALKRAVALEPGSSEYHQWLGRA
                     YGRKAEKSSGFAALSVAKKCKKEFDLAVQLDPQNIKAQRDLIEFIADAPSDLGGGEER
                     GLEQIQALSALDELQGRLALADFHAERKKYAQSDAEYQAILESSPETTDAWLEIADYF
                     RGRGNATRIAQAVAGAENADASDRRLSYYRGTALVLANRDFDAAEKFLQTYIDTVPEN
                     SELPSHSSAYAYLGKLSENRSQPERAIQQYTKALELNHDNRMAKQRLKALQKH"
     gene            1488..2309
                     /locus_tag="VE783_05940"
     CDS             1488..2309
                     /locus_tag="VE783_05940"
                     /inference="COORDINATES: protein motif:HMM:NF018590.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1269 domain-containing protein"
                     /protein_id="HYX52972.1"
                     /translation="MEKLLVVVFDTEKQAYEGLKALNKLDWEGSIAIHSECVVEKNPD
                     GTISTKQLEGDVPIRTLAGTWLGTLIGLFAGPVGAAVGASAGLVAGMTADTYVAGVNA
                     EFLMDVSEKLAPGKFAVAADVSEEWVTPVDIAMEPLGGTVFRSARSVVESEQHARHIT
                     ELKNDIAQLQAEQARVQADRKARIQARIDELNEKLDSSLAQSRARTEAWQQETKAKIT
                     ALKAKAAKATRDKLAVIDARIIEIEQRHDAQLAEMKRATAARLRQQADVLEKAAG"
     gene            complement(2364..3392)
                     /locus_tag="VE783_05945"
     CDS             complement(2364..3392)
                     /locus_tag="VE783_05945"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52973.1"
                     /translation="MAASQMTADFQQFLNQGLGLTQAQIADIESGKPVAKEMAARTPD
                     EVLLIGVVFIRATPESYLRFATDLERKRTQPGTLGFGIFSDPPQLAELRGFAFDDADL
                     DSLKDCRPGACSVQMPASYIRGLQQGIDWSSSEVGARVNAGLQQGVLDLLRAYKQDGN
                     KAFGTYDDKHHSTDVARQFAYLLSYSRALPTTLPEFYTYLLEYPNSKPANVDDTFYWE
                     HVKFGLKPTLRVVHMMVWHGQESAPVAYAVAQKQLYASHYFETALDLSFCVRSADPRQ
                     TGSYLIMALGSEQRGLSGFKGSIVRNAAVGRSVSSLQRGLLYAKSRLESAGNTSALRQ
                     SSGKDNKQ"
     gene            complement(3461..4123)
                     /locus_tag="VE783_05950"
     CDS             complement(3461..4123)
                     /locus_tag="VE783_05950"
                     /EC_number="3.4.21.-"
                     /inference="COORDINATES: protein motif:HMM:NF013827.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="rhomboid family intramembrane serine protease"
                     /protein_id="HYX52974.1"
                     /translation="MAGIIPISDASRHSRTLPILTILIIVVNIAVFLLELQQGEAFVI
                     QWSVVPAQITAGHHWINILTAMFMHAGWMHIISNMVFLWCFGPMIEDAMGPARYLPFY
                     ILSGITGSLAQIALVPSSTLPELGASGAIAGIMGAFLVTYPGDRIKSVMFLGIFWKTT
                     FIPAAILIGVWFLIQLFSQVTAGPSQSGEGVAYAAHVGGFIFGAIFGRLLERPQCSEA
                     WS"
     gene            complement(4260..4850)
                     /locus_tag="VE783_05955"
     CDS             complement(4260..4850)
                     /locus_tag="VE783_05955"
                     /inference="COORDINATES: protein motif:HMM:NF015674.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF308 domain-containing protein"
                     /protein_id="HYX52975.1"
                     /translation="MTYFADLMASGLDRLRRLSTQFVVFGLAMMALGALCVVKANTAT
                     TFSILALGWVLAISGVLWLASSIFALNWHGFFLYALNAVVRCVTGYLLIRHPDAGAAG
                     VTLLIAGLLMIGGIFRGVAASVLQFPRWGWTLFSGVVSVALGAYLLSTWPAATAFFVG
                     LMIGIDLIFDGASLAGFGVALRTLPVMRETPRAKAA"
     gene            complement(5804..6016)
                     /locus_tag="VE783_05960"
     CDS             complement(5804..6016)
                     /locus_tag="VE783_05960"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52976.1"
                     /translation="MAEDDEPLLPELELPELDEPECCDPEELVPLEPEELEEPECEDP
                     EGLELPWLELPELAELFEPEDLPEFF"
     gene            6226..6963
                     /locus_tag="VE783_05965"
     CDS             6226..6963
                     /locus_tag="VE783_05965"
                     /inference="COORDINATES: protein motif:HMM:NF013073.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NlpC/P60 family protein"
                     /protein_id="HYX52977.1"
                     /translation="MRRRIAHCTLIVSAILFWTASATAQCRPGLVLVGEDAHYWYCSA
                     PLAASDVHEVLDKNNPEMLGSQWRFRKGILDAVAGLARDGRVYQWGGKILVQANGTST
                     WICVADECRNSTANGIDCSGAAAYGELSSCFIGGFYAAAGTIRGLETSAAGQADIFKR
                     YKAFRGRSDTPLPGDLIFFKNTARKRSGITHVAIYVGTTRDGRTVILHASSRAGVVLF
                     GDLSRDLASNIAGYGDSSRLFTAAGKQ"
     gene            complement(7225..9219)
                     /locus_tag="VE783_05970"
     CDS             complement(7225..9219)
                     /locus_tag="VE783_05970"
                     /inference="COORDINATES: protein motif:HMM:NF014427.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ig-like domain-containing protein"
                     /protein_id="HYX52978.1"
                     /translation="MRITARLLILTLLGLVFLTGCSGGGSGATQTNFTPTPTPGASPS
                     PTPAATPTPTPAPITLTSLQVTPGTIAIGTGAKQQFTALGKFSDNSTKDMTASVAWSS
                     SDSAIASIDGTGLATGVVSGSVTVTAKSGTIQGTAGLSVTVAAANLTTISITPAASSI
                     PVNTTQQFTATGTYSDGSSRDLSALVTWGSSATSVATIDANGLVSAISAGPTTISATL
                     GAVTGNTGLTVTTPVISFLTVSPDGLTLGAGVKQQFTATATYSDGSSQDLSSGVTWST
                     SDNTLATVNSTGLVTTVAAGTITITATLGSINDSATLTVVPAKLLSISVSPSNPSIAL
                     GTTEQFTATGNFDDGSTQQLTSVTWSSSDVNVATINASGLATSTGTGPATITATSGSV
                     SGSASLTVTSAALVSIVVTPNPASMAIGTTQQFTATGTFSDNSTQDVTASVLWSSSSP
                     TVATINNQGVASSVAIGTTTITATFGAVSGPATLNVSNAHLISITISPANPKIQLHTL
                     IRFTASGTFSDNSVATNLSGLSWKSNHPNIASIRSNGVANGKKLGPVTITASASGVAG
                     TTTLTVSNATLSSLAITPVNPSVTLGTPQQFTATGTFSDNSTQDVTLNTHWSSSSSGV
                     ATVANGPGSAGLATTVGKGSTAIGANSGGVIAPATTLTVK"
     gene            9603..10655
                     /locus_tag="VE783_05975"
     CDS             9603..10655
                     /locus_tag="VE783_05975"
                     /inference="COORDINATES: protein motif:HMM:NF040149.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5700 domain-containing putative Zn-dependent
                     protease"
                     /protein_id="HYX52979.1"
                     /translation="MFLTAFLGLILFGSPAQDGGRVQVRIDTQEPEAVLSIVGKQEAG
                     GTPNDEDWQRLFTSEGYRRLQKREAAIKHPFTDDDFRKFVLSGDLQARADKLRETVDS
                     WKDLDVSHAAALALAYLPENASIHAAIYPSIKPNDNSFVFEIGSDPAIFIYLNPEMSR
                     EELENTLAQELHHIGFGTTCPPAEVKADSAKQSAPVQIVRKWAGAFGEGFAVLAAAGG
                     PDNHPMEAYPQEKHEKWDLDMGRFYQNRIELDDFFMKILKGELSGDKADAQAMNYFGE
                     RGPWYTVGYRMGTVIESAFGRQRLINSACDGSFLAAFNEATASQTRGAPHPAGKSMWS
                     PEIIKAMSLKQPENPQ"
     gene            complement(10706..12376)
                     /gene="rpoD"
                     /locus_tag="VE783_05980"
     CDS             complement(10706..12376)
                     /gene="rpoD"
                     /locus_tag="VE783_05980"
                     /inference="COORDINATES: protein motif:HMM:TIGR02393.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor RpoD"
                     /protein_id="HYX52980.1"
                     /translation="MNANQAPEDAEREQPDFLEDEVIPGGITPDLAGADELDDISMMV
                     DYEGIDLEDAELPSQRARRAEAVEDEEELDLAPAPEVLEKTSDPVRLYLREMGTVPLL
                     TRQGEIDLARRFEGGHNRVLKAISRSPLGIREVIRLGEELERGVRSIKEVVVFDEEEV
                     TDEVVAARAKETIELIDELASNYAKLQEFEKKLDEIPEKKEAKKHRRYRWKVARKRVE
                     ISLTIRGLKYTNPERKRLIDLVTRMAENMRSVERQQQSLEKKIAATRSEEQKAELKRQ
                     SRNCQTEMKRLEAEAGASFEEMRRTQREIVQGNVDAEHAKRELVEANLRLVVSIAKKY
                     GNRGLHLLDLIQEGNMGLMKAVDKFEYRRGYKFSTYATWWIRQAITRAIADQARTIRV
                     PVHMIENINKVIRTSRLLVQELGHEPTSEEIAQRMDIPVSTVRKVLKIAQHPISLESP
                     VGQEEDTRLGDFIQDTAGVSPAEAMIRVNLKEQTAHVLRTLNPREERIIRMRFGLEDG
                     SEHTLEEVGQNFQVTRERIRQIEAKALRKLRHPSRSRRLRAFMDGERE"
     gene            12366..12722
                     /locus_tag="VE783_05985"
     CDS             12366..12722
                     /locus_tag="VE783_05985"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52981.1"
                     /translation="MAFIFFRGDKNSPFLKCSELLQNIDALASPIDAAWGRLWRNPLS
                     PWAARLMPSSILLGFLTARRGKRSLERRAQGVNFFQNRVQPLLQLALGPRLGFGPGEL
                     CVVRKGATVKISCFLQ"
     gene            complement(13025..13426)
                     /locus_tag="VE783_05990"
     CDS             complement(13025..13426)
                     /locus_tag="VE783_05990"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52982.1"
                     /translation="MANENRKTEVSTIRMEQKTEIFLALKDLLQKYEGEFAIKANTPS
                     HYYLETRSLSLNGRRLFFAAAKLKKNYVSFYLTPLNMYPELSVRVSPGLRKTMQGQSC
                     FNLTMPSRDDLNELRNLTEAGYQRFRKEPLL"
     gene            complement(13517..13831)
                     /locus_tag="VE783_05995"
     CDS             complement(13517..13831)
                     /locus_tag="VE783_05995"
                     /inference="COORDINATES: protein motif:HMM:NF012305.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-binding protein"
                     /protein_id="HYX52983.1"
                     /translation="MKKIYVGNFSFSMTEPELRAMFEPFGAIESASVATDRDTGRSRG
                     FGFVQMTNDAEAEKAMAALNGKDSGGRALTVNEARPQKERSFGGGGGGNRGGFRQKRD
                     RW"
     gene            14231..>14822
                     /locus_tag="VE783_06000"
     CDS             14231..>14822
                     /locus_tag="VE783_06000"
                     /inference="COORDINATES: protein motif:HMM:NF013486.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminopeptidase P family N-terminal
                     domain-containing protein"
                     /protein_id="HYX52984.1"
                     /translation="MNYLARQKRLAEELRRQHAHILLVTHLPNIFYLCGFTGSSAVLL
                     VSAGERIPKLTLFTDGRYTEQAKAEVKNARVVISKLPALVEVCNAARKLKPKSVFFEA
                     ANISYSAVNQIRHQLRPAGIQVKPLSEAIEQLRLIKDPDEIAGVRDAVNLGSSLFTGL
                     VKSIKPEVPEAQVAGELELAARRAGAEKMSFDTIVAS"
BASE COUNT         3106 a         4259 c         4250 g         3207 t
ORIGIN      
        1 attagaacca aaatcaccat ttccggtgac ccgagtcaca tcagatccgc tggccaggac
       61 ctagcttgag tataggtagc aggtcacccg ggtctccgct ccaccgcaat ctgccagccc
      121 ttcgtaggcg catctgaaag gagggcgctc atgcagttcg tcacgcaagt tctcgagaat
      181 tcatgggctc agaaagcacg agacagaatg ctcgtgatct ctcttgcctt gctgatggtt
      241 acgattgcgg cgggaactgc aaatgcccag ccgcagtcaa cggacagtct ctctcctgcg
      301 atagccgctc tgtatcactc gggaagctat gatgcggcgg cggaccaatt gcgagccagg
      361 ctggcgcgga acgcaaacga cgccttatcc aattactggc tgggacgatg tctcttcgag
      421 atggacgact ttgatggggc gatctcagct ctcaagcggg ccgtggccct ggagcccggg
      481 agctccgaat atcaccaatg gctgggtcgc gcgtacgggc ggaaagcaga gaagagttcc
      541 ggattcgcgg cgctttctgt cgctaaaaag tgcaaaaaag aatttgatct cgcggtacag
      601 cttgacccgc aaaatatcaa ggcacaacgc gacctgattg aatttatagc agacgctcca
      661 agcgatctgg gtggcggcga ggaacgcggc ctggagcaga ttcaggcgtt atcggcacta
      721 gatgagctcc agggacggct tgcgcttgct gattttcatg cagagcgcaa gaagtacgcg
      781 cagtcggacg ctgagtacca ggcgatcctg gagtcgtcgc cggaaaccac cgatgcgtgg
      841 cttgaaattg ccgattattt tcggggtaga ggcaatgcca ctcgcatcgc gcaagcggtt
      901 gccggagcgg agaacgccga cgcttcggac cgccggctga gctactaccg cggcacggcg
      961 ctggtgctgg caaatcgcga cttcgatgcc gcagagaagt tcctccaaac ctacatcgac
     1021 accgtgcccg aaaattctga gctgccgtcg cattcatctg catatgcata cctgggcaag
     1081 ctctcggaga accgcagcca gccggagcgc gcgatccagc aatacaccaa ggcgctggaa
     1141 ctcaaccatg acaatcgcat ggcgaagcaa cggctgaagg cgctgcagaa gcattgagcc
     1201 tccacgttgg tgttggacaa tcgatcacat ccttatcacc ttgtcgcgca ctgctgcggt
     1261 cacatttttc ggtgatccct gtcacagcaa ctccacagat gaagacctag gttgatgaca
     1321 gagcagttgt gcacggacgg ggtggcccat tcgctcaggc gagacctgcg gttcactctc
     1381 atccggtcaa tcccgaccaa gctcctcagc cgagccgcga gttgagttgc cacacccgtt
     1441 caagaacgac tgccccgcaa cgagcacaca ccgaaaggag ccccgtcatg gaaaaattgt
     1501 tagttgtggt ttttgacacc gagaagcaag cctacgaagg tttgaaggcc ctcaacaaac
     1561 tcgattggga aggcagcatt gccatccact ccgaatgtgt ggtggaaaaa aatcctgatg
     1621 gcaccatctc aaccaaacaa ctggaaggag acgtgccgat tcgtaccctc gctggcacat
     1681 ggcttggaac cctgattggg ctctttgccg ggccagtggg tgcagcggtt ggagccagcg
     1741 ctggcctggt ggctgggatg acagcagata cgtacgttgc cggcgtgaac gcagagttcc
     1801 tcatggacgt ttcggaaaaa ctcgcgcccg gcaagttcgc tgtggcggca gacgtcagtg
     1861 aggaatgggt aactccggtg gacatcgcga tggagccgct gggcggcacg gttttccgca
     1921 gcgcgcgttc ggtggtggag tcagagcaac atgccagaca catcacggag ctcaagaacg
     1981 atattgcgca gttgcaggct gaacaggcgc gcgtccaggc ggaccggaag gccaggattc
     2041 aggccaggat tgatgagctg aatgagaagc tcgattccag cctcgcccag agcagagcac
     2101 gcactgaagc gtggcaacag gagaccaagg caaagattac cgcgttgaag gccaaggcgg
     2161 ccaaagcgac gcgcgacaag ctggcggtga tcgacgcgag aatcatcgag atagagcaac
     2221 gccacgatgc gcagctggct gagatgaaac gtgctaccgc cgccagactg cggcagcaag
     2281 cagacgtgct ggagaaggca gccggataat tccggaatgc ttgttcaacg atccccacgc
     2341 gacactgctc agcgtgggga tttttattgc ttgttgtctt ttccggagct ctggcgcagc
     2401 gcgctagtgt tgcccgccga ttcgagacgg ctcttggcgt agagcaaccc gcgctgcagg
     2461 ctggagacgg agcggcccac ggccgcattt cgcacgatgg atcccttgaa cccggaaagg
     2521 ccccgctgtt ccgagccgag cgccatgatc agataagagc cggtctggcg cgggtcagcg
     2581 ctacggacac agaacgagag atcgagagca gtctcgaagt agtggctggc atagagctgc
     2641 ttctgggcta cggcgtaagc gacgggcgcg gattcctggc cgtgccacac catcatgtgc
     2701 accacgcgca gggtgggttt gagtccaaac tttacgtgct cccagtagaa ggtgtcgtcc
     2761 acgttcgccg gtttggagtt gggatattcg agcagatagg tgtagaactc cggcagggtt
     2821 gtgggcaggg ccctgctgta gctgagaaga tacgcgaact gccgggcaac gtcagtggag
     2881 tgatgcttgt catcgtaggt gccaaaggcc ttgttgccgt cctgcttgta ggcgcgcaga
     2941 aggtctagga cgccctgctg aagccctgca ttcacccgcg ccccaacttc agaagaggac
     3001 cagtcgatgc cctgctgaag gccacggatg taactggccg gcatctgaac cgaacaggca
     3061 cctggccggc agtctttcag ggagtccagg tccgcatcgt cgaaggcgaa tccccgcagc
     3121 tcggcgagtt gcggcgggtc gctgaatatg ccgaacccca gcgtgccggg ctgggtacgc
     3181 tttctctcca gatccgttgc aaaacgaaga tagctttccg gggtcgcgcg gatgaatacc
     3241 acgccaatca gcaaaacttc atcaggggtg cgtgccgcca tttctttggc gaccggcttt
     3301 ccgctttcta tgtctgctat ctgcgcctga gtaaggccca gaccttgatt gaggaactgc
     3361 tggaaatcgg cggtcatttg cgaagccgcc actccgctcg ctccacagag cgtgagtaaa
     3421 agggccacga acgttcttaa gcgcgatgga atcatacgag ctaactccag gcctcactac
     3481 actgcggccg ctcgagaagg cgcccgaaaa tggcgccaaa aatgaagccg ccaacgtgag
     3541 ccgcataagc aacgccttcc ccgctctggc tgggtccggc agtcacctga ctgaacagtt
     3601 ggataagaaa ccagacgccg atcagaatcg ccgcaggaat gaaggtagtc ttccagaaaa
     3661 tgcccaggaa catcacgctc ttaatgcggt caccagggta ggtgaccaga aaagcgccca
     3721 tgatgccggc aatcgcacca ctggcgccga gctccggtaa cgtggaggat ggcaccagag
     3781 caatctgagc caaagacccg gtgatcccgc taagaatgta gaacggcaga tagcgcgcag
     3841 ggcccatggc atcttcaatc atcggcccaa agcaccacag gaagaccatg ttgctgatga
     3901 tgtgcatcca gccggcatgc atgaacatgg cagtgagtat gttgatccag tgatggcccg
     3961 ctgtaatctg cgccgggact accgaccact gaatcacgaa tgcctcgccc tgctggagct
     4021 ccagcaaaaa cacagcaata tttaccacga tgatcagaat ggtcagaatc ggcagtgttc
     4081 tcgagtgacg agaagcgtca gaaatcggaa tgatgcctgc cataaatccg tcctttccat
     4141 tcgcggcatc gggttgcggc cagcctgatt caagaggccg ctacggagcg gtggaccgtg
     4201 gagtacaagc gccgccgagc taaatacaag ttttacgagc ggcgcctttt gaatttatct
     4261 tatgccgcct tcgctctggg tgtctctctc atcaccggaa gagtacggag tgcaacgcca
     4321 aaaccagcga gcgatgcacc gtcaaaaatc aggtcgatgc cgatcatcag ccctacaaag
     4381 aaagcagtag ctgccggcca cgtgctcagc agataagcgc ccagcgcaac tgagaccaca
     4441 ccggagaaga gcgtccagcc ccagcgcgga aactgaagaa cgctggccgc aacgccgcga
     4501 aagatgccgc cgatcatcaa caggcccgcg ataagcaacg tgacgcccgc tgcccccgca
     4561 tccggatgcc ggatgaggag atatcctgta acgcaacgca cgactgcatt cagcgcatac
     4621 aggaaaaagc cgtgccagtt caatgcgaag attgagctgg ccaaccaaag cacaccgctg
     4681 atggcgagca cccatcccag ggcgagaatc gagaatgtag ttgccgtgtt ggctttgacg
     4741 acgcaaagcg cccccagagc catcatggca agtccgaaga caacgaactg ggtggacagc
     4801 ctgcgcaggc gatccagacc tgaagccata aggtctgcaa agtatgtcat tgcctttccc
     4861 tccttccctt gtgtcccctc attaccatac tcagccctcc ggtttcagtc ctgcggtgat
     4921 attgatcaca ggggcacgat catgtgacag tggctcgcag caagtgattc gctcactgaa
     4981 ggtcggggct ctcaagcaga aagtgtcagc ctgagctgcg cagttgattt tctttcagag
     5041 cgccgtaggc gcgtcagaag ttagccagcg cgttgagcgc tgggagagtt cagaagaaag
     5101 ttggagcgcc gtaggtgcgg caccagggct aatttcttct ctgatcagct tccatgtgcg
     5161 tcaatgtacg gcaaacggat agccccgccg catccgttct gtttatatcg caccgatgcg
     5221 ggatcaattt gttcttgtag ttagggccgt ctaaaggtaa gctgcgcaat tgataagtaa
     5281 tttacgggta cgcggctcgt tccccacgcc gctttggagc tagtcaaatg gcagagcata
     5341 aggagcatct ggcacagggg tgggcctccc tcgttcctga attctttttt gacattatcg
     5401 ccagagtgct gccgggcgcc tatctcgtcc ttggggccgg caaaaacgtt tctgatccgc
     5461 gctcatccgc gttgatccac ggtagatcta gtcttggtct tcgattacgg cgattccggc
     5521 gattccggcg atccctcctc gccctcgcgg tgacttctgt aacttagaaa aaacacaata
     5581 ctgtgtaacg attgccccgt cccccgcaca tactcatcag agattcacaa caactgcttc
     5641 gctgacaaat cccccttttg agcgaactaa cttattggcg gtctaattac gaaaggcgga
     5701 ttctcatgaa atcagtgttt ctgcggctta tggtcgctgg catgtttctc ggcgcaagcc
     5761 tggccctcac ggcgcaatca gaaagagttc ccaaagacaa agatcagaag aactccggca
     5821 agtcttccgg ttcaaacagc tccgcaagct ccggcagctc cagccatggc agctccagcc
     5881 cttcaggatc ttcgcattcg ggttcctcca gttcttcggg ttccagcggc accagctctt
     5941 ctggatcgca acactccggt tcgtccagtt ccggcaactc caattccggc aacaatggct
     6001 cgtcgtcttc agccactacc catcatcaag tccattcccc aacgcttgat aaattgcaag
     6061 agtcgcagac cggccaggcc aatggcaaag gcgctcccag cagcagccat gaatacgatg
     6121 gctccgaaaa gaagaaataa cgctgctgtc aaaacggttt agagaggccc attcccccgc
     6181 gcctctcatt ccctgcagtg aattattgaa ggaagggagc agcgcatgag gcgtcgcatc
     6241 gctcattgca ctttgattgt ttctgccatc ctgttctgga cggcttcagc aaccgcccag
     6301 tgccgtccgg gactggtgct ggtgggggaa gacgcgcatt actggtattg ctccgcgccg
     6361 ctggcggcat ccgacgttca cgaggtgctg gataagaaca accctgagat gctgggctcg
     6421 caatggcgtt tccgcaaggg aattctcgat gcggttgccg gactggcgcg tgatggccgc
     6481 gtataccagt ggggcggaaa aatcctggtc caggcaaacg ggacctccac ctggatctgc
     6541 gtggccgatg agtgtcgcaa ctccaccgcc aacggcattg actgctccgg cgccgcagct
     6601 tatggcgagc ttagctcgtg ttttattggc gggttctatg ccgcggcggg gaccattcgc
     6661 gggctcgaaa ccagcgccgc cggccaggcg gatatcttca agcgctacaa agccttccgt
     6721 ggccggtctg atactcctct gccgggcgac ctgatcttct tcaagaacac ggcgcgcaag
     6781 cgcagcggta ttacccatgt tgccatctac gtcggcacca cgcgcgacgg ccgcaccgtg
     6841 atcctgcacg cctcctcgcg tgccggcgtg gtcttgtttg gcgacttgtc ccgcgaccta
     6901 gcctcaaaca tcgcaggtta cggcgacagc tcgcgattgt ttactgcagc aggaaagcag
     6961 taagagcatt caagagctgg caaggcgcgg cgcacacgcc agcccaccgc aatcttccgc
     7021 aatggatgag ccttcacttt tgccgctgtc cggcaggtgt gcctcaagct agtcaatagc
     7081 tagtgccttg gccatcagtg ttcgtctctg tcatcactgg gcgaatggtt ttctgatcca
     7141 cgcccactcg tgttgatctg tcgtgagatg ctcgcagcgc tggcgatatc cgggcgcgag
     7201 agcgaactcg cgcccggtcc tggtttattt cacggtgaga gtcgtcgccg gcgcaataac
     7261 tccacccgaa ttggctccaa tcgcggtgct gcctttgccg accgtagtcg ccagaccggc
     7321 tgaacccggg ccgttagcaa cggtcgccac accggatgaa gacgagctcc agtgagtgtt
     7381 gagcgtcacg tcctgcgtgc tgttgtcgct gaacgttccg gttgcggtga actgctgcgg
     7441 ggtacccagc gtcactgatg ggttcaccgg cgtaatggcg agggaactca gagtcgcgtt
     7501 gcttactgtg agagtggttg tgccggcaac gccagaagcg ctggccgtga tggtaaccgg
     7561 gccgagcttc ttgccgttgg ctactccatt ggatcggatg gaggcaatgt tcggatggtt
     7621 tgacttccat gacaggccgc tcaggttggt ggcgacgctg ttgtcgctga atgtgccgct
     7681 tgccgtgaat cggatcagcg tatgcagctg aatcttcgga ttcgccggac taatggtgat
     7741 gctgatcagg tgcgcgttgg agacattgag agtggccggg ccgctgaccg caccaaaagt
     7801 cgcagtaatc gtcgtcgtcc ctatcgccac actggaagct actccctgat tattgatagt
     7861 cgccaccgtt gggctggagg agctccagag cacggatgcg gtcacatcct gagtgctgtt
     7921 gtcactgaat gtgcccgttg ccgtgaactg ctgcgtggtc ccaatagcca tgctggccgg
     7981 attcggggtt acaacaatgg acaccagggc agcgctggtt accgtaagag aagccgaacc
     8041 gcttacggag ccggaagttg ctgtaatagt tgcgggcccc gtccccgtgc tggtggccag
     8101 tcccgatgca ttgatggtgg ctacgttaac gtcagaagaa gaccaggtca ctgacgtgag
     8161 ttgttgagtg ctgccatcat caaaatttcc agtcgccgta aattgctccg ttgtgcccaa
     8221 tgcgatggat ggatttgatg ggctcaccga aatcgagagc agtttagcgg ggaccacggt
     8281 cagcgtggct gagtcattga tgctgccgag tgtcgccgtg attgtaatgg ttcccgcggc
     8341 cacggtcgtg accaatccgg tggagttcac ggttgccaga gtgttgtctg atgtgctcca
     8401 cgtgacgcca ctggaaagat cttgagacga gccgtcactg taagtggccg tcgccgtgaa
     8461 ttgctgtttc acgccggcgc ccagcgtgag cccatccgga ctgaccgtga ggaatgaaat
     8521 cactggagtc gtcacggtga ggccggtgtt tccggtcact gctcctagag ttgcggaaat
     8581 ggtggttggc cctgcgctga tggcgctcac caacccgttt gcatcaatgg tggccaccga
     8641 agtcgccgag gaaccccatg ttaccagcgc gctgagatcg cggctgcttc cgtcactgta
     8701 ggtgcccgtc gcggtaaatt gctgggtcgt gtttacggga atcgaagaag ctgccggggt
     8761 aatgctgatg gtggtgagat tggcggccgc tactgtaacg gaaaggcccg ccgtcccttg
     8821 aatggttccc gattttgccg tgacggtgac tgaaccgctg acaactccag tcgccaggcc
     8881 cgttccatca atggaggcga tcgccgaatc tgacgagctc caggccaccg atgctgtcat
     8941 gtccttggtg ctgttgtcgg aaaacttgcc caacgcggtg aactgctgct ttgcgcccgt
     9001 gcctatcgcg atcgtcccgg gtgtgacctg caaactcgtt agtgtaatcg gagcgggagt
     9061 tggagtcggc gttgcggccg gagtcggact tggcgaagca cccggagtcg gcgtgggagt
     9121 aaagttggtt tgggttgcgc cgcttcctcc gccgctgcag ccggttaaaa acacaagtcc
     9181 aagcaaagta agtatcagca aacgagctgt gattctcatt gtcaggctcc gagcccatgc
     9241 agggctttcc gtcgaatttt ttgggggaat taggtgggga aggctgccgg agagcgttga
     9301 tatctgctat tcgagcttgg tacatggccg gaaggacatg taccatatcc gaaatggtat
     9361 tacgtcgtgt ggattgctgt caatgtaaat cggagactct ggtagtggta agaactaccc
     9421 ctgcaagagg tcggttgagg aacgccaagc ccttattaat cagcgggttc gcatcgcaaa
     9481 gagccacaga atcggcccac cgaatcatct gaagcaactg aggctttgcc ccgcgggtaa
     9541 cgtcttctga ctttcccctg atgcctgctc caggattttc gggttatcct ctctgcatct
     9601 ttatgttcct caccgcattt cttggtctta ttcttttcgg ctctcccgca caggacggcg
     9661 gccgtgttca ggtccgtatt gatactcaag agccggaggc ggtgctcagc atcgtcggca
     9721 aacaggaagc cggcggcacg ccgaacgacg aagactggca gcgcctcttc acttcggagg
     9781 gctaccgccg tctgcagaag cgcgaggcgg ccatcaagca tccgttcacg gatgatgatt
     9841 tccgcaaatt tgttctctcc ggcgatctgc aggcccgtgc cgacaagctg cgcgaaacag
     9901 tcgatagctg gaaagacctc gacgtgagcc atgccgctgc cctggcgctt gcttacctcc
     9961 ctgaaaatgc ctccatccac gccgccattt atccttccat caagccgaac gacaactcat
    10021 ttgtgtttga gatcggttcg gatccggcca ttttcatcta tctgaatccg gagatgagcc
    10081 gtgaggaact tgagaatacg ctcgcgcaag agctgcacca cattggcttt ggcacaacct
    10141 gcccgccggc cgaggtaaaa gctgattccg ccaaacagtc cgcgccagtg cagatagtcc
    10201 gcaaatgggc cggcgctttt ggcgaaggct tcgccgttct ggctgcggct ggcgggccag
    10261 acaatcaccc catggaagct tatccgcagg agaagcacga aaaatgggac ctcgacatgg
    10321 gccgcttcta ccagaaccgc attgagctgg atgatttctt tatgaagata ctgaaaggcg
    10381 agctcagcgg tgacaaagct gacgcgcagg ccatgaacta tttcggcgaa cgcggcccct
    10441 ggtacaccgt cggctacagg atgggaacgg tcattgagag tgccttcggc cgccagcggc
    10501 tgatcaattc tgcatgcgat ggttcattcc tggcggcctt caacgaagcc actgcgagtc
    10561 agactcgcgg agcgccgcat ccggcaggga agtcgatgtg gtctccggag atcatcaagg
    10621 ccatgagcct aaagcagccg gaaaacccgc agtaaatgaa atgggccggc actcagccgg
    10681 cccgttaacg atactctcta aagcgttact cccgctctcc atccatgaac gcccgcagcc
    10741 tgcgtgaacg cgaagggtga cgcagcttgc gcagtgcctt ggcttcaatc tgccggatgc
    10801 gctcgcgcgt aacctggaaa ttctggccga cctcttccag cgtatgctcg gaaccgtctt
    10861 ccagtccaaa gcgcatgcgg atgatccgct cttcccgtgg attcagcgtg cgcaaaacgt
    10921 gcgcggtctg ctccttcagg ttcacccgga tcatcgcctc ggccggtgag accccggcgg
    10981 tatcctggat gaaatccccc agccgcgtat cttcttcctg gcctaccggg ctctccagtg
    11041 aaatggggtg ttgcgcgatc ttcagcactt tgcgcacggt ggaaaccgga atgtccatgc
    11101 gctgcgcaat ctcctctgac gttggttcgt gtcccagctc ctgaaccagg agccgcgagg
    11161 tccggatgac cttattgata ttttcgatca tatggaccgg cacgcggatt gtgcgggcct
    11221 ggtcggcaat ggcgcgggta atcgcctgcc gaatccacca cgtggcatag gtcgaaaact
    11281 tgtagccgcg gcgatattca aacttgtcca cggccttcat caatcccatg ttgccttcct
    11341 ggatcaggtc cagaaggtgc aggccgcggt tgccatattt cttggcgatg gaaactacaa
    11401 ggcgcaggtt ggcctccacc agttcacgct tggcgtgctc ggcgtccacg ttgccctgaa
    11461 caatctcccg ctgggtgcgg cgcatttctt caaagcttgc gcccgcctcg gcctccagcc
    11521 gcttcatttc ggtctggcaa ttgcgcgatt ggcgcttcag ttctgccttc tgttcctcgc
    11581 ttcgagtggc ggcaatcttc ttttccagcg actgctgctg ccgttccacg ctgcgcatgt
    11641 tttccgccat gcgcgtgacc agatctatga gccgcttgcg ttccgggttg gtgtatttca
    11701 gtccccggat ggtcagggaa atctccaccc gtttgcgcgc caccttccag cggtaccggc
    11761 ggtgcttttt cgcttctttc ttttccggaa tttcgtccag cttcttttcg aactcctgaa
    11821 gctttgcgta attggaagca agctcgtcaa tcagctcgat ggtctctttc gcgcgggccg
    11881 ctaccacctc gtccgttact tcttcttcgt caaagaccac cacttccttg atcgaccgga
    11941 caccgcgctc aagctcctcg cccagccgga tcacttcccg gattcccagc ggcgagcgcg
    12001 aaatggcttt caacacccgg ttgtgtccgc cctcaaagcg ccgtgccagg tctatttcac
    12061 cctgccgagt cagcagcggg acggtaccca tttcccgtaa atagagccga acgggatcgc
    12121 tggtcttttc cagcacttca ggcgcgggag caaggtccag ctcctcttcg tcctccacag
    12181 cttctgcgcg gcgggcgcgc tgtgaaggga gctccgcatc ttccaggtcg atgccttcgt
    12241 aatcgaccat catggagatg tcgtcgagct cgtccgcgcc ggccaggtcc ggggttatcc
    12301 cgcccgggat cacttcatct tccagaaaat caggctgctc gcgctccgcg tcctcaggcg
    12361 cctgattggc attcattttc tttcgtggag acaagaattc accttttctc aaatgctcag
    12421 aactgcttca aaatattgat gctctggcca gcccgattga tgctgcatgg ggccgccttt
    12481 ggcgcaaccc gctctcgccc tgggccgcaa ggctgatgcc ttcttcaata ctgcttggtt
    12541 tcttaaccgc aaggcggggg aaacgcagtt tagagcgacg cgctcagggc gtcaatttct
    12601 ttcaaaatcg tgtccagccg ttgctgcaac tggcgcttgg tccgcggctt ggcttcggtc
    12661 cgggcgaact ctgtgtagtt cgcaagggag cgacggtaaa aatcagctgt tttctgcaat
    12721 agttctactt tctgggtttc aagggagggg ttctcagtgg acattatcct attttacaac
    12781 gacatccgtc gccgcagggg cgaaatctga tgtccgccag tcagggcgtt tagatcaagc
    12841 cagaccgcca cattcagctt atctggtcct gctcacttcc cgggtttcgt caattcgccg
    12901 gtgccattgc aggcagagca gcgcattccg tccttcaggc cggagccgtg gcaaaccgga
    12961 caacgcggac cggacccgct accttgcttt tttgatccag acgtcatgga ttaaataact
    13021 cccttcagag caacggctct ttccggaacc gctgatagcc cgcttcggtg agatttcgca
    13081 actcattcag atcgtcccgg ctcggcatgg tcaggttaaa gcaggattgc ccctgcatcg
    13141 tctttcgcag ccccggtgaa accctcacgg agagctccgg atacatgttc aggggcgtca
    13201 ggtagaagct cacatagttt ttcttcagct ttgccgcggc gaagaacagc cgtctaccat
    13261 tcaagctcag cgagcgggtt tccagatagt agtggcttgg ggtgttcgcc ttgatcgcaa
    13321 actcgccttc atacttctgg agaaggtcct tgagagcaag gaatatttct gtcttttgct
    13381 ccatccggat tgtggagacc tcggtcttcc tgttctcgtt tgccatgaat acctgcgcgc
    13441 atccactctg cccttttgcg gttgagcaga acgggccagc gaggagcggc acgggggccc
    13501 ctcctcgccg gaattcctac cagcgatcgc gtttctgacg gaacccgccg cggttcccgc
    13561 caccgccgcc gccgaaactg cgttctttct gcgggcgagc ttcattcacg gtcagcgcac
    13621 ggccccctga atctttgccg ttcagggctg ccattgcctt ttcggcctcg gcgtcattgg
    13681 tcatttgaac aaatccgaat cctcgtgaac ggccggtgtc gcggtccgtc gccacgcttg
    13741 cgctctcgat tgcgccgaaa ggctcaaaca tcgctcgaag ttccggttct gtcatactga
    13801 aagagaaatt gccgacgtaa atctttttca cgtgcggact ccttgtctgt gtattgcttg
    13861 gattgcactc gttctcagca gaaataggca ggacaaaagc ggaactgttc tatcagagtc
    13921 gaggacttca tgtgcttctc tgatactaca cccgaatgca gcgtaccgag gggtgtaaat
    13981 ggcgcagcgc ctggggacgg taccggatgt gcgtgaaagc actcagttta agtaaacagg
    14041 aagatcaact cgcccttggc attttcctgc cctcgcggaa ggaagatgct gaaaactttc
    14101 ccattgccga tggctgcttc ggaaagcaga tcttgccttg gtggttgcgc acgacttcgc
    14161 aagaaacgcc ttgtagcaac tccgcggggt tgagtgggcg caatgttctc tgctgctacc
    14221 atattcagtg atgaactatc tggcccgcca gaagcgtctg gctgaagagc tcaggcgaca
    14281 gcatgcgcac attcttctgg ttacgcacct gcccaacatt ttctatcttt gcggcttcac
    14341 cggcagctcc gctgtccttc tggtctcggc cggggagcga attcccaaac tcacgttatt
    14401 tactgatggg cgatacaccg agcaggccaa agccgaagtc aagaatgccc gcgtggtgat
    14461 cagcaagttg ccggcgttgg tagaggtctg caatgcagcg cgcaagctaa agccgaagtc
    14521 agtatttttt gaggcggcaa atatctccta ttccgccgtg aatcaaattc gccaccagct
    14581 ccgtccggct gggattcagg tgaagccact gtccgaggcg attgaacagc tccggttgat
    14641 taaagaccct gacgagattg cgggagttcg ggacgcggta aatctcggat cgagtctatt
    14701 caccgggctg gttaaatcga tcaagccgga ggtccctgaa gcgcaggtgg caggcgaatt
    14761 ggaacttgct gcccgcaggg cgggagcgga gaagatgtcc ttcgatacga ttgttgcatc
    14821 cg
//
LOCUS       DASQYP010000187        11749 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_262189, whole genome shotgun sequence.
ACCESSION   DASQYP010000187 DASQYP010000000
VERSION     DASQYP010000187.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 11749)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11749)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11749
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_262189"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..455)
                     /locus_tag="VE783_06005"
     CDS             complement(<1..455)
                     /locus_tag="VE783_06005"
                     /inference="COORDINATES: protein motif:HMM:NF013088.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HYX52985.1"
                     /translation="MPTEAAEQQIPSSAAAPEAHYWRGYFLIAAATFCWGAAATVGKK
                     AFNGSFFSGSTQISPLVLSQGRTTFAVLVLGIFLVGRFGRPFFRISARDLLLAVCVGI
                     FGLAGSNYFYYLAIQKGPVALAITLQYTAPVWVLLTMVARGKERFTFRAL"
     gene            complement(445..630)
                     /locus_tag="VE783_06010"
                     /pseudo
     CDS             complement(445..630)
                     /locus_tag="VE783_06010"
                     /inference="COORDINATES: protein motif:HMM:NF012675.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0015035 - protein-disulfide reductase
                     activity [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="glutaredoxin domain-containing protein"
     gene            complement(725..1153)
                     /locus_tag="VE783_06015"
     CDS             complement(725..1153)
                     /locus_tag="VE783_06015"
                     /inference="COORDINATES: protein motif:HMM:NF014608.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OsmC family protein"
                     /protein_id="HYX52986.1"
                     /translation="MVEGRAIWLDGERFVLQGSSGHALVADSDRQRNTAPGPMELVLN
                     ALCACTATDVVSILTKKREPFTGLQVRAEAERASEPPTVYTSIRLVYSVTGPIQRKSV
                     EDAVRLSEQKYCSVSAMLGKTARITTEIELLTDASNRTKS"
     gene            1253..1888
                     /locus_tag="VE783_06020"
     CDS             1253..1888
                     /locus_tag="VE783_06020"
                     /inference="COORDINATES: protein motif:HMM:NF019265.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor"
                     /protein_id="HYX52987.1"
                     /translation="MEGFSQAAQWNVEGEAAAPDRTMAEAAAADQELLRQLARGNEGA
                     FRTLYERYQGRLYRYALHMSGNPATAEETTQELFMLLIKGSESFDPEKGSVAGYLFGM
                     ARNITRRSMNGVSSEVALDDDDDRDEFALAGDLEILEELSQADLLETLRKAVVGLPEQ
                     YREAVVLCDLEEHTYDQAAEVMGCSPGTVASRLNRARALLKKKLSYQKCVK"
     gene            1876..2460
                     /locus_tag="VE783_06025"
     CDS             1876..2460
                     /locus_tag="VE783_06025"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52988.1"
                     /translation="MREIDPIRNPSEALLSSALNRLATGSPKSAPEVVSGNLVREFRQ
                     HHRLRRQKRMAIIGSIAACLVAVALLVVQKSAWNHGAQSPALQALQEALQAQPTEQPA
                     QPEKAPETQNPHHVASTVSTATTSNGEAGYLTLAPYDFTVSAADLTIVRVELTGSDLR
                     LLGAPVSEDFSDQRLLADVVVSGDGTPYALRIVR"
     gene            2485..3336
                     /locus_tag="VE783_06030"
     CDS             2485..3336
                     /locus_tag="VE783_06030"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52989.1"
                     /translation="MKLSSLVIAAMLSLASAAAQDAPQLTDQKQKVEFFQTIPGPGAG
                     PDAMFVSVEPMEMGKVVKGAPYSATAVTESTQMLADGNRIVRKQTTQVARDGEGRVRR
                     ELGEMAGPLQIDAPKLVMIHDPVAKTAFILNPAAQTARVLKHEDGPGMHGMAGMRVQH
                     EKMPSGSVKRTHPLDQMTSNTESLGTQTIEGIVAEGRRETRTIPAGAIGNEQPITITT
                     EIWQAKDLGVTVLRKRSDPRFGETSYRLTNIKTGEPDPLLFQVPSGFKTITGPGRNMP
                     IPPPPGE"
     gene            complement(3404..4837)
                     /locus_tag="VE783_06035"
     CDS             complement(3404..4837)
                     /locus_tag="VE783_06035"
                     /inference="COORDINATES: protein motif:HMM:TIGR01297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cation-efflux pump"
                     /protein_id="HYX52990.1"
                     /translation="MSTSDLNPALESMRAEKRAVALNSVLAALGITALKVVVGISTAS
                     LGILSEAAHSGLDLIAAIITLLSVRVSDKPADAEHQYGHGKVENFSAFLETGLLLLTC
                     IWIVWEAVRRLSGHHAVHIEPSLAAFGVLLASMAVDWWRSHRLRRIAQKYDSQALEAD
                     ALHFSTDIFSSGVVLVGLALVAAGRSWNLPWLTKSDPVAALVVSGVIVYVSWRLARQT
                     VDALLDAAPSGLRSQVIENVLKVNGVIEVERVRIRRAGNRYFADLTVGLARNVTFQRS
                     GQVVSAIVEAVHRILPDCDVVIHSVPRETGHESIFDRVRAVAARNNFSVHDVSVQDLG
                     GRLHVEQHLELDETLSLKQAHDVVSVLESEIRREVPEVSTILTHIESEPSTIEPGNAL
                     LRDAVLEQKLRPLIREFPEVIDMHEVEIKRVRGRVYMSCHCTMADDLPLGRVHDISTE
                     LEIRFKQAAPELFRVLIHPEPMTDNRR"
     gene            4942..5979
                     /locus_tag="VE783_06040"
     CDS             4942..5979
                     /locus_tag="VE783_06040"
                     /inference="COORDINATES: protein motif:HMM:NF024545.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HYX52991.1"
                     /translation="MLFRALMVCLLAAATALAQTSSPAKTGASQTPATAGERKPASTA
                     APAPTAGADVSPNEPVITLHGLCEGGSAASGSACEKKVTREQFEALLQAFNPSHQNVT
                     PPMRRNLAQAYVELLAFAEAAERAGIENGANYKEIMRVLRLRTLADLYGRSLEEEYRN
                     PPASEIEKYYNEHVAEFQNMKLRRVYVPRFDPTGKASAPDQKAAFDAKAQKVAEDMYG
                     RASKGENMEQLQKDAYNAMDIKSTAPSTDMGGIRKGALPPDTDKALAALAPGGVYKAS
                     DATSYVIYKVESKEQLPLANVKDEIARNLARVHIEEKKKEVSSSVKVDFDDKYFGAPT
                     GNMPAIPRPDR"
     gene            6194..7273
                     /locus_tag="VE783_06045"
     CDS             6194..7273
                     /locus_tag="VE783_06045"
                     /inference="COORDINATES: protein motif:HMM:NF013530.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HYX52992.1"
                     /translation="MALKPTVLITGISGNLGVRLLPQLTDFQVIGTDLHEPDVEGLFR
                     FERIDLGEERSCDQLLDLMRQYRPESVVHLAFVLDPVRTGITDRKQMWNVNVAGTSRV
                     TEAIAEHNRMIGGVERFIFTSGAMVYGPMVEKLVTEDAPLNAQSLPYALHQQEADMTV
                     QARARGFKKCKTYILRSHVYAGASVQNYQLGVLRGVPGGKGFLADRLRRQGKKLPLWL
                     PSKGDYLEHRFQFVHVDDVASLTSYILQRKQPDPPLNVLNVAGRGDPMSLRRCIDIAR
                     IEVKRVPSRTMCRQTMRLLWDLGVSDIPPEALPYLLGSCAMDTARLRVFLGEHYRTII
                     QHTCEEALAESLSEHPADELAAASH"
     gene            7385..8128
                     /locus_tag="VE783_06050"
     CDS             7385..8128
                     /locus_tag="VE783_06050"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX52993.1"
                     /translation="MVTPEWRNSHLKSLVWSVAAGLLAVALASQLSLRTSAQDTDQED
                     PAKFMKVSGTVSSVQLRDEEKIVKAAVTMNISAENIGKDNLIILRRPPDSVFESLSNS
                     ETADQPMWSAAHRPQIERGSADRKWEKLQAALEKAEPDDDNSIILSPGDSMGWNIVVQ
                     LNIAKVSETSVNAPGGQPARTTWQSVQKSCPCWLRFDASFWPMSLEPKSNGDDPAFGK
                     KLAKRWRKKGLLVLGEKRSEPIPIQLPAR"
     gene            complement(8144..8782)
                     /locus_tag="VE783_06055"
     CDS             complement(8144..8782)
                     /locus_tag="VE783_06055"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF013742.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0032259 - methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="O-methyltransferase"
                     /protein_id="HYX52994.1"
                     /translation="MAGENIVARAVEQYMDTLLPPRSAVLAEMEAQAKQRDIAIVGPA
                     VARVLYQYAKLIGAKRIFELGSAIGYSTIWWAQAVGERGEVHYTDGDRNNAAEARKYF
                     EREGVQDRITIHVGDALEVLSEQKQEFDIIFNDVDKEDYPRVLHLVHGRLRKGGLFIT
                     DNVLWSGRVTQSDSQEASTRAIQEFNRRIYADQGFFTTISPLRDGVAVAMKL"
     gene            complement(8782..9489)
                     /locus_tag="VE783_06060"
     CDS             complement(8782..9489)
                     /locus_tag="VE783_06060"
                     /inference="COORDINATES: protein motif:HMM:NF001911.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal-dependent hydrolase"
                     /protein_id="HYX52995.1"
                     /translation="MKLNGIKLTWLGHATFHIETPAGKKILIDPWVMNNPATPADKKK
                     FDDIDVMLCTHGHGDHIGDAVELVKRHNPRVVGVYELCLWMNKKGAQQIMPMNKGGSQ
                     EVGDIYVTMVHADHSCGIEDDGQIIYGGEPCGYVIQFQNGLKIYHAGDTNVFGDMRII
                     HELYQPDLVMLPIGDVFTMGPREASYACKLLNPKAVIPMHFGTFPLLTGTPKELERRI
                     QDMGIELHTMKPGETLS"
     gene            complement(9570..9926)
                     /locus_tag="VE783_06065"
     CDS             complement(9570..9926)
                     /locus_tag="VE783_06065"
                     /inference="COORDINATES: protein motif:HMM:NF012790.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhodanese-like domain-containing protein"
                     /protein_id="HYX52996.1"
                     /translation="MPLPEYHDLVNAAKKEIKEITPDELKQMQSSGEKFELVDVREPD
                     EVAQGAIDGSVALPRGMLEYKIDTITTDKDAAIVCYCGGGGRSALAAQNLKKMGFKNV
                     MSLAGGYKGWKEKNSQ"
     gene            complement(10070..10963)
                     /locus_tag="VE783_06070"
     CDS             complement(10070..10963)
                     /locus_tag="VE783_06070"
                     /inference="COORDINATES: protein motif:HMM:NF025684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4384 domain-containing protein"
                     /protein_id="HYX52997.1"
                     /translation="MKVARRYMANPRTALVAVMMFAAIAPAQERGIKPDEFIQARPIQ
                     KTHAVAATAHPVYKPLGPAAAVPASAGNVRQIGMTIWRLRPARKTDTGARIIVQEQAN
                     DVEWTPERISTTTPLKIGEHLRFSFEAAQKGFLYVIDRERYADNSLGEPTLIFPTTRL
                     RNGENAVTPGQLIEIPDQGDQPNYFTLQRSRADQSGEELVLLLTPEPLPEIKPGTSAQ
                     VLPAEKVAAWEKAWGHSAQELELVGGAGRAWTKAEQQAGKDQTRLLTQADPSPQTVYR
                     VSAGPNDPVVVHVQLRYGAAK"
     gene            complement(10969..>11749)
                     /locus_tag="VE783_06075"
     CDS             complement(10969..>11749)
                     /locus_tag="VE783_06075"
                     /inference="COORDINATES: protein motif:HMM:NF024180.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="CHAT domain-containing protein"
                     /protein_id="HYX52998.1"
                     /translation="KPAPALVAVFADPVFAADDPRVRKTEAKAPKEETVAAAQPVTAV
                     SDDSRMLKHLASGAPSSSPGRLEVPRLPFTREEATRITRMVPAGESFEALDFKASLAT
                     VTSSTLARYRYLHFATHGYLDTERPELSSLVLSLVDPSGRPQDGFLRAQDIYNLKLNA
                     DLVVLSACETGLGKEIRGEGIVGLTRGFMYAGAPRVIVSMWSVNDRATEELMGAFYER
                     LLKRGMRPSAALREAQLEMSKSKKWSAPYYWGAFVQQGEWR"
BASE COUNT         2552 a         3433 c         3322 g         2442 t
ORIGIN      
        1 agggctcgaa acgtaaatcg ctccttgccg cgcgccacca tggtcagcag aacccagacc
       61 ggcgcggtgt actgcagagt aatggcgagc gccacgggtc ccttctggat ggccaaatag
      121 tagaagtagt tcgacccggc aagaccaaag atcccaacgc agaccgccag caacaggtcg
      181 cgggcgctga tgcgaaaaaa tggccggccg aagcgaccca ccagaaagat ccccagaacc
      241 agcacggcaa atgtggttct tccttgcgag agcactaatg gggagatctg ggtactgcca
      301 ctgaagaaag agccgttgaa agctttctta ccgacggttg cggccgcgcc ccagcaaaac
      361 gtggctgccg caataaggaa atagccccgc caataatgcg cctcgggcgc ggcggcgctc
      421 gaaggaatct gctgttcggc cgcttcagtc ggcaagcatc tggtccaggc gatcaggatc
      481 gaagccgatc atgacctttt cgccaacaac aatggtggga gtggaacggc ttttgtaggt
      541 ccggaccagt tcgaaaaccg cttgctggtc ctggctgaca tctttcactt cgaatggaat
      601 gcctttctcc gaaaggtagg cctttgccca ggaacaaggc ggtcaacccg gtgagctgta
      661 aaccactact ttctttgcca tccatgcctc cgaaacaata gattccagta aatgcccggg
      721 cgtttcacga ttttgtgcga tttgatgcgt ccgtgagcag ttcgatttca gtggtgatcc
      781 gcgccgtttt gcccagcatt gcggaaaccg aacagtattt ctgctcggat agccggaccg
      841 cgtcctccac tgattttctc tgtatcggcc cagtcacgct atagacaagg cggatgctgg
      901 tatagacggt gggaggctcg gaggcgcgtt ccgcctctgc ccggacctgc aggccggtaa
      961 agggttcgcg tttcttggtg aggatgctta caacgtcagt ggcggtgcag gcacataatg
     1021 cgtttaaaac cagttccatg ggtccggggg cggtgttgcg ctgccggtca gaatccgcaa
     1081 ccagcgcatg accgctgctt ccctgcaata caaagcgttc gccgtccagc caaattgccc
     1141 taccctcaac catttcactc acctcacatt gcagcgccgg tttaggatac cagcactccc
     1201 ggttcccagg atttgcggat gtcgaaggcg acaccagagt gtcaaaaaaa agatggaagg
     1261 attttcgcag gccgcgcaat ggaatgtaga aggcgaagca gcagcgcctg acaggaccat
     1321 ggcagaagcg gcagcagcag accaggagtt gctacggcag ctcgccaggg gtaacgaggg
     1381 cgccttcagg acgctttatg agcgttacca gggccggctg taccgttacg ctttgcacat
     1441 gagtggaaac cccgccacgg ctgaggagac gacccaagag cttttcatgc ttctgatcaa
     1501 gggttcggaa tcctttgatc ctgaaaaagg gtcggttgcg ggatacctgt tcggcatggc
     1561 acgaaacatc acgcgacgca gcatgaacgg tgtttcctct gaagtggccc tggatgacga
     1621 tgatgaccgt gacgagtttg cactcgccgg agatttggaa atactcgaag agctaagcca
     1681 ggctgacctg cttgagacgc tccgaaaagc agtcgttgga ctgccggaac agtaccgaga
     1741 agctgtggtg ctgtgcgatc tggaagagca cacctatgac caggctgccg aagtgatggg
     1801 ttgttctccg ggtacggtgg cttcacggct gaaccgggcg cgtgcattgc ttaagaagaa
     1861 gttgagttac cagaaatgcg tgaaatagat ccaatccgta atccctcaga ggcgctgctg
     1921 tcatcggccc tgaaccggct tgcgacgggt agtccgaaga gcgcgccgga agtggtgagc
     1981 ggaaacctgg tgcgggaatt tcgccagcac catcgtctgc ggcggcagaa gcggatggcc
     2041 atcatcggtt caattgctgc ctgcctcgtt gcagtcgcgc tgcttgtggt tcagaagagc
     2101 gcatggaacc atggagcaca gtcacctgct cttcaggccc tacaagaggc cctacaagcg
     2161 cagccgaccg aacagcctgc gcaaccggag aaagcgcccg aaacacagaa tccacaccac
     2221 gtcgccagca ccgtatcaac ggcaactacc tccaacggtg aggctgggta cctaacactg
     2281 gcgccttatg acttcaccgt ttccgccgcg gacctgacga tcgttcgagt agagcttacc
     2341 ggctctgatt tgcgcctgct gggcgcgccc gtgagtgaag acttttctga ccagcgcctg
     2401 cttgccgacg tggtggtgag cggcgatggc acgccttacg cattgagaat cgttcgctga
     2461 gaaagttcct aaaggagaaa gttgatgaaa ttatcttcgc tagtgatcgc ggcaatgctt
     2521 agtctggcga gtgccgctgc acaggatgca ccccagctta ccgaccagaa gcagaaagtc
     2581 gaatttttcc aaacgatccc tggtcccggg gcagggccgg acgccatgtt cgtctcagtg
     2641 gagcccatgg agatgggcaa agtcgtgaaa ggcgctccct actccgccac cgcggttacg
     2701 gagagcacgc agatgctcgc ggacggcaac cgcattgtgc ggaagcagac gacgcaggtc
     2761 gcccgagacg gagaaggccg agtgcgcagg gagttgggcg agatggccgg ccccctccag
     2821 atagacgcgc cgaagctggt catgatccat gacccggtgg cgaagacagc attcattctc
     2881 aacccggctg cgcagaccgc tcgcgtactc aagcatgagg acggacccgg catgcatggc
     2941 atggcaggaa tgcgtgttca gcatgaaaag atgccgtcgg gcagcgtcaa gcggacgcat
     3001 cctctggacc agatgacttc caacacagaa tcgctcggta cccaaacgat tgagggaatc
     3061 gtggcagaag ggcgccgcga gacccgtacc attccggccg gcgctatcgg caacgaacag
     3121 ccgattacga tcacaacgga aatctggcag gcgaaagatc tcggcgtgac tgtgcttcgc
     3181 aaacggagcg atccccgctt tggggaaacg agctaccgcc tgaccaacat caagacgggt
     3241 gagcctgatc ctttactgtt ccaggttcca tccgggttca agacgattac cgggccgggg
     3301 aggaacatgc ccattcctcc accaccggga gaatagcttc tctctctgct ttccctcctg
     3361 tggtctcaat actcagccgg gcgctcgggc ccggcttttt tcgtcagcgt cgattatcag
     3421 tcataggctc ggggtggatg agtacgcgga agagttccgg cgcagcctgc ttaaaacgaa
     3481 tctccaactc ggtcgaaatg tcatgaacgc gtcccaaagg aaggtcgtct gccatggtgc
     3541 agtgacaaga catgtagacg cggcctctca cgcgcttaat ttcaacctca tgcatatcta
     3601 tgacttccgg gaattctcgt atcagaggcc ttagcttttg ctcaagcacc gcgtcgcgca
     3661 gtaaagcgtt gccaggctca atcgttgatg gctcactttc gatatgagtc aggatggtcg
     3721 atacctccgg cacctcacgg cgaatctcgc tttcaaggac actcacaacg tcatgcgcct
     3781 gcttcaggct gagagtttca tccagttcca ggtgctgctc cacgtgaagc cgtccaccca
     3841 ggtcctggac gctgacgtcg tgcacgctaa agttgttccg cgcggcgact gctcgaacac
     3901 gatcgaatat gctttcgtgg ccggtctcgc ggggaacgga gtggatcact acgtcgcagt
     3961 caggcagaat gcggtgaact gcctccacaa ttgcagatac gacctgtccc gagcgctgga
     4021 aggtgacgtt gcgggccagc cctaccgtca gatcggcaaa atagcggttc cctgcccgcc
     4081 ggattctgac gcgctcgact tctatcaccc cattgacctt cagcacgttc tcaatcacct
     4141 ggctccgcag gccgctggga gccgcgtcga gcagggcgtc gacggtctgg cgtgcgagac
     4201 gccagcttac gtacacaatc acgcctgaga ccaccagcgc ggcaacaggg tcagatttgg
     4261 tcagccaagg cagattccag ctgcgccctg ccgcaaccag ggccagaccg accagcacca
     4321 cgccgctgga gaaaatgtct gtgctgaagt ggagcgcatc ggcttccagt gcctggctgt
     4381 cgtacttctg tgcaattctc ctgaggcggt gcgagcgcca ccagtccacc gccattgacg
     4441 ccaacaagac accgaaagcg gccagactcg gctcgatatg gactgcatga tgtccgctga
     4501 gccggcgcac agcctcccag acaatccaga tgcatgtaag cagcaataac cctgtttcaa
     4561 gaaaggcgga aaagttttct accttgccgt gcccgtattg atgttcggca tctgccggct
     4621 tatcggatac tcggacggag agcagcgtga tgattgccgc aatcagatca agccccgaat
     4681 gggcagcctc agagagaatg ccgaggctgg ccgttgaaat tcccacaacc actttgagcg
     4741 cagtaatccc cagcgctgcc aatacggaat tcagcgcgac ggcacgtttt tccgcccgca
     4801 tactttccag cgcgggattc aggtctgaag ttgacacttt cgcttattct ctcaattttc
     4861 agggccaatc tacagttgaa acagtatgtt acgatgatga tcttccaaaa gcagttctta
     4921 tctctgaaag gaaccaaagg gatgctcttt cgcgcactca tggtgtgcct gctggcagct
     4981 gccacggctc tggcacaaac aagttcgccg gcaaaaaccg gcgcttcgca aactccggcc
     5041 actgccggtg aacgtaagcc ggcctcaact gccgcacccg cgccaacagc cggtgcggat
     5101 gtctcgccga atgagcccgt gatcaccctg cacgggcttt gtgaaggcgg atctgccgct
     5161 tcgggcagcg cctgtgagaa gaaagtgacg cgtgagcagt ttgaagcgct gctacaggct
     5221 tttaatccaa gccaccagaa cgttaccccg cctatgcgca gaaacctggc acaggcatat
     5281 gtggagctcc tcgcatttgc agaggcggcg gagagagctg ggattgagaa cggcgcgaac
     5341 tacaaagaga tcatgcgtgt gctgaggctg cgcaccttgg ctgaccttta cggacgctcg
     5401 ctcgaggagg aataccgcaa tcctcccgcg agtgaaatcg agaagtatta caacgaacac
     5461 gtggcggagt ttcagaacat gaagctgcgg cgggtatatg tgccgcgttt tgatcccacc
     5521 ggcaaagctt cagcgccgga tcagaaagct gcctttgatg ccaaggcgca gaaagttgcg
     5581 gaagacatgt acggccgggc cagcaagggc gagaacatgg agcagttgca gaaagacgcc
     5641 tacaatgcca tggacattaa gtcgaccgcg ccgtccacag acatgggcgg gattcgcaaa
     5701 ggcgcgctcc ctccggatac agacaaggct ctggccgcac ttgccccggg cggagtttac
     5761 aaagcaagcg acgccacctc gtatgttatt tacaaagtcg aatccaagga acaactgcca
     5821 cttgctaacg tcaaagacga aatcgcccgc aacctggcgc gcgtccatat tgaagagaaa
     5881 aagaaagagg tttcgtcctc tgtaaaagtg gattttgatg acaagtattt cggagcgcca
     5941 acaggcaata tgcccgcgat tccccggcct gaccgataga ttccggagct actctcgatt
     6001 gtggccttca ggtgattccc tgatggcata caccgggtca caacggctag atagataaag
     6061 ttctttcggg cagacgaacg agcatgcaag gttcgtatta ccatagagtt acaagcacct
     6121 gctgagggcg caacaggcta cgagatcggc gattgagccc ggcattcatc tgcaatgtgc
     6181 aaagccaatt ctgatggcgc ttaaacccac agttcttatc accggcatct ccggaaacct
     6241 gggagtgcgg ctcctgccac aactcactga tttccaggtg atcggcaccg atctgcatga
     6301 gccggatgtc gagggactgt tccgctttga aaggattgac ctgggcgagg agcggtcatg
     6361 cgatcagctt ctcgatctga tgcggcagta ccgtcccgaa tctgtggtgc accttgcgtt
     6421 tgtgctcgac ccggtgcgta ccgggatcac ggaccggaag cagatgtgga acgttaacgt
     6481 cgccggaacg agccgcgtta ccgaagccat cgctgagcac aatcgtatga tcggcggggt
     6541 ggaacgattt attttcacca gcggcgccat ggtttacggc cccatggtgg aaaaactggt
     6601 caccgaagat gctccgctga acgcgcagag cctgccatat gcgctgcatc aacaggaagc
     6661 cgacatgact gtgcaggcac gggcccgcgg tttcaaaaag tgcaaaacct atatcttgcg
     6721 ctcgcatgtt tatgccggcg ccagcgtgca gaactatcag ctgggggtcc tgcgtggagt
     6781 tccgggtgga aagggattcc ttgctgaccg gctgcggcgt cagggcaaga agttgcccct
     6841 atggcttcct tccaaaggcg attatctgga acaccgattt caatttgttc acgtggacga
     6901 cgtggcttcc ctcaccagct atattttgca gcgaaagcag cccgatcctc cgctcaacgt
     6961 gctgaatgtg gctggccgcg gcgatcctat gtcgttgcga cgctgcattg acatcgcccg
     7021 cattgaagtc aaacgcgtgc catcgcgcac catgtgccgc cagaccatgc ggcttctatg
     7081 ggacttgggc gtctctgaca ttccacctga agcgcttccc tacctgctcg ggtcctgcgc
     7141 tatggatact gcccgtctcc gggtgttttt gggtgagcac tatcgcacca taatccagca
     7201 cacttgcgaa gaagcgcttg ccgagagctt gtctgagcat ccggcagatg agctggctgc
     7261 ggcgagccac taggggcggc cgccaacgtc ctgtgcacgt tctcgcaacc ggcacatttt
     7321 ccttgcttag ctgttcctcc agggctacac tctgcgccgc agagttaacg ggggccaaga
     7381 gcatatggtc actcctgagt ggcgcaactc gcacctgaaa tcgctcgtct ggtccgtcgc
     7441 tgccgggctg ctcgcagtcg ctctcgccag ccagttgagc ctgcggacgt cagctcagga
     7501 caccgatcag gaagaccccg ctaaattcat gaaagtcagc ggaacagtca gctccgtcca
     7561 gctgcgggat gaagaaaaga tcgtcaaggc ggcggttacg atgaacatct ccgccgagaa
     7621 tatcgggaaa gacaacctca tcatcctgcg acgaccgccc gattctgtgt tcgagtcact
     7681 ttcaaattcc gaaacagcag atcagcccat gtggtcggcg gcgcatcgtc cccagattga
     7741 gcgtgggagt gccgatcgaa aatgggagaa gctgcaagcg gcactggaga aggctgaacc
     7801 ggacgatgac aacagcatta ttcttagccc cggtgacagc atggggtgga acattgtggt
     7861 gcaactcaat attgcgaagg tgagcgagac cagtgttaac gcacccggcg gacaacctgc
     7921 acgcacgacg tggcagagcg ttcagaaatc gtgcccctgc tggctccgct ttgacgccag
     7981 cttctggcct atgagcctgg aaccaaaaag caacggcgac gacccagcgt ttggcaagaa
     8041 gctggcaaaa cgctggcgca agaagggctt gcttgtgctt ggcgagaaac gatcagagcc
     8101 cattcccatc cagttgccag cccgctgacc cttgagtcgg attctacagc ttcattgcga
     8161 ccgctacccc atcgcggaga ggcgagatcg tggtaaagaa tccctggtcc gcatagattc
     8221 gacggttaaa ctcttgaatg gcacgcgtgg aagcttcctg cgaatcactc tgcgttacgc
     8281 ggccgctcca aagcacattg tcagtgatga ataagccacc cttgcgcaat cggccgtgca
     8341 ccaggtgcaa gacgcgcgga tagtcttcct tgtccacgtc attgaagatg atgtcgaatt
     8401 cctgcttctg ctctgagagg acttccagcg catctcccac gtggatcgtg atccggtctt
     8461 gcacgccttc acgctcaaag tactttcgcg cttccgcagc gttgttgcga tcgccatcgg
     8521 tgtagtgcac ttcgccgcgt tcaccaaccg cctgcgccca ccagatggtg gaatagccga
     8581 ttgcggagcc cagttcaaag atgcgctttg caccgatcag tttcgcgtac tggtaaagca
     8641 cgcgcgccac cgctggaccc acgatagcga tatcgcgctg ctttgcctga gcttccattt
     8701 cggcaagcac ggcgctgcgc ggcgggagca gcgtgtccat gtactgctca acggccctgg
     8761 cgacaatgtt ttctccggcc atcaggaaag cgtctctccg ggcttcatgg tgtgcagttc
     8821 gatgcccatg tcctgtatcc ggcgctccaa ttccttcggc gtgccggtga gaagcgggaa
     8881 cgtaccaaag tgcattggga tcacggcctt gggattgagc agcttgcacg cgtagctggc
     8941 ttcgcgaggt cccatggtga atacgtcgcc gattggaagc atcaccagat ccggctgata
     9001 gagctcatgg atgatccgca tatccccgaa tacgtttgta tcgccggcat gataaatctt
     9061 gaggccgttc tggaactgga tcacataacc gcaaggctca ccgccgtaga tgatctggcc
     9121 gtcatcttca atcccgcagg agtgatcggc gtggaccatg gttacatata tgtctccgac
     9181 ctcctgtgag ccgcccttgt tcatgggcat gatctgctgc gcgccctttt tattcatcca
     9241 caggcatagc tcatagacgc caaccactct cgggttgtga cgcttcacca actccacagc
     9301 atcgccgatg tggtctccat gaccgtgggt gcaaagcata acgtcaatgt catcaaattt
     9361 cttcttgtca gctggcgtgg cagggttgtt catcacccag gggtcgatca ggatcttctt
     9421 tccagccggg gtctcgatat gaaaagtagc gtggccaagc cacgtaagtt taattccatt
     9481 cagcttcatc tgttttcacc ctttacgttc ttgattgctg tttcaggttg caaccagcgc
     9541 tgcttcagtc gagcgatttc ggctcacgat cactgactgt tcttttcctt ccagcctttg
     9601 tacccgcccg ccagcgacat aacattcttg aagcccatct tcttcaggtt ctgcgcagcc
     9661 agcgctgagc gacctccgcc gccgcagtag cagacgatcg ccgcgtcttt gtcggtggtg
     9721 atggtatcga tcttgtattc cagcatgcct ctcggcaggg cgacggagcc atcgatggcg
     9781 ccctgcgcga cctcgtcggg ctcgcgcaca tcaaccagct caaatttttc tcccgacgac
     9841 tgcatctgct taagttcgtc tggtgtaatc tccttgatct ctttcttagc agcattgacc
     9901 aggtcgtggt attcgggaag gggcacagtt cacctcgaga aagatgcaac cgcaaattct
     9961 aaatggcgat ggactgtact ggaaatggat ggataaagga agctcaagag atgaaagcgc
    10021 atgacgaaag cggaacgcgg agcacacttt cgcgctccgc gtagcaaagc tattttgcgg
    10081 ccccgtacct gagctgaacg tgaactacca ccggatcatt gggccccgca gagacgcgat
    10141 acaccgtctg agggcttggg tctgcctgcg tcagcaacct ggtctggtct tttccggcct
    10201 gctgctccgc ctttgtccac gcgcgtcctg ctccgcccac cagttccagt tcctgcgctg
    10261 aatgtcccca cgccttttcc catgctgcga ctttctccgc cggcaaaacc tgcgcgctcg
    10321 tgccgggctt gatttccggc agcggctcgg gcgtgagcaa caggaccagt tcctctccgc
    10381 tctggtctgc gcggctgcgc tgcagggtga agtaattcgg ctgatctccc tggtcaggga
    10441 tctcgatcag ctgcccgggc gtaacggcgt tctcgccatt gcgaaggcgc gtcgtgggaa
    10501 aaatgagcgt gggctcgccg agcgagttgt cggcgtagcg ctcgcgatct atcacataga
    10561 gaaaaccttt ctgcgcggct tcaaagctga agcgcagatg ctcgccgatc ttgagcggtg
    10621 tggtggtgga gatgcgttcc ggcgtccatt caacatcgtt tgcctgctcc tgcacgataa
    10681 tgcgagctcc ggtatctgtt ttgcgcgctg ggcgcagccg ccagatggtc ataccgatct
    10741 ggcgcacgtt gcccgcgctc gccggcactg ctgctgcagg acctaagggc ttatacaccg
    10801 gatgcgctgt agcagcgacc gcgtgcgtct tctgaatcgg acgcgcctgg ataaactcgt
    10861 ccggcttgat tccgcgctcc tgcgccggtg caatggcagc aaacatcatg actgctacaa
    10921 gagcggtcct cggattggcc atataccttc gagcgacttt cacggcactt acctccattc
    10981 accctgctga acaaaagctc cccaataata cggagccgac cacttcttgc ttttcgacat
    11041 ctcgagctgt gcctcgcgca gcgccgctga cggccgcatg ccgcgtttga ggagccgctc
    11101 gtagaaggcg cccatcaatt cttcggtcgc acgatcattc acactccaca tgctcacgat
    11161 cacacgcggc gccccggcgt acataaaccc acgcgtcagg ccaacaatgc cttcaccgcg
    11221 aatctctttg cccaatccgg tctcacaggc gctcagcaca accagatcgg cattcagctt
    11281 caggttgtaa atatcctgag cacgtaagaa gccatcctga gggcgtccgc tcgggtccac
    11341 gagcgacaac acaagcgacg atagctccgg gcgctcggta tcgagataac cgtgggtggc
    11401 gaaatgcagg tacctgtacc tcgcaagcgt gctgctggtc accgtggcca gactggcttt
    11461 gaaatcgagc gcttcgaagc tctcgcccgc ggggaccatt ctcgtgatcc gcgtggcctc
    11521 ttcgcgggtg aaaggcagcc gcggaacttc cagccgtccg ggtgaactcg agggcgcgcc
    11581 gctcgcaagg tgcttcagca tgcgcgaatc atccgaaacc gcagtcactg gctgggctgc
    11641 cgccacggtt tcctcttttg gtgctttagc ttcagtcttt cgaacccgcg gatcatccgc
    11701 agcaaacacc gggtcagcga acactgcgac aagagcagga gccggtttg
//
LOCUS       DASQYP010000188         3308 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_181491, whole genome shotgun sequence.
ACCESSION   DASQYP010000188 DASQYP010000000
VERSION     DASQYP010000188.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 3308)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3308)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3308
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_181491"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1281
                     /locus_tag="VE783_06080"
     CDS             <1..1281
                     /locus_tag="VE783_06080"
                     /inference="COORDINATES: protein motif:HMM:NF012801.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HYX52999.1"
                     /translation="DLYKELAGESVVGTNYTPPFSLTLDANAHLSGGNLTGRWARKYD
                     NGGDLQLEAYYDRANRHEPNFGDIRDTFDVDFLAHRPLPGKQRLSFGSGARFTRVNEL
                     VVVTGLTFDPRELTDRLVTGFVQDEITFVPNRLQLIGGTKLLNTNFADLEFEPNIRLL
                     FTPSKTQSFWAAFTRAVRTPADVERDFFLSGFVGTAPGGIPFLARFNANRNFKPEKMN
                     GYEAGYRRLLGKNLYVDLAAFYNQYSDLFSQEITGPPFLETTPPPLKDNIPAVPHLLL
                     PAQFGNGLKGSTSGIEVAPEWKPASFWRLRGWYSFLAMHIEKSPNSIDIGTSPGIEGS
                     SPGHQVFAQSSFDLPHKVSFDLLYRYVSALPGQGVKPYSSGDITSSWAMSDHVTLMVV
                     GQNLLRPHHAEFGGDPKSIVEIRRGVYGKLTFTK"
     gene            1293..1913
                     /locus_tag="VE783_06085"
     CDS             1293..1913
                     /locus_tag="VE783_06085"
                     /inference="COORDINATES: protein motif:HMM:NF025069.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YfiR family protein"
                     /protein_id="HYX53000.1"
                     /translation="MTLRKFSRYRCRKRDRSNALQRAVAAAAVLLLSACMLNSRATPP
                     ASTEYEVKAAYLLNFGRFVRWPGARAVASGQTFPVCVMGEDPFGAILDATVRDEKIEN
                     LAVIASRVSTPQEASGCKILFLSRSEQGQARKTMAALKNAGVLTVSDMPDFLERGGII
                     QFVIRGNKVRFEVNLDNAQEAGLTLSSELLKVADAVHGKRSGGGGR"
     gene            1910..>3308
                     /locus_tag="VE783_06090"
     CDS             1910..>3308
                     /locus_tag="VE783_06090"
                     /inference="COORDINATES: protein motif:HMM:NF028461.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HYX53001.1"
                     /translation="MTSISRRLTLMNLLVSASALLLASTGFLLYDQFTFRQNLVRSLS
                     AEAEIVGANSASALMFNDPQSAERTLEPLKAFPNIRAAGIYTPDGRVFARFSGAQAAI
                     PQVPEGRVEIAEFSSDEVVVVRQIVFQGKTLGSVFIRSNLSELSHRLSRYLLIAGIVL
                     LISLLAAWLISSRYRESIAGPVVSLAKTARAVSEEKNYSLRAKPTNDATETGMLVNAF
                     NEMLQQIQSRDEALREAHDELEARVVERTRQLLVANRELEAFSYSVSHDLRGPLETIN
                     GYVHLIITKPGVNLDADTRESLGQVQAAARRMAELIDDLLNLSRVTTTAMHVERVDLS
                     ALALSVAQDLKRRDPARQIDFVIRDHSPAQGDPRLLQIVLENLLRNSWKYTSGREHAV
                     VEFGYERRANADVFFVRDNGVGFDPTQAERLFKPFQRLHSEAEFPGTGVGLATVQRII
                     ERHGGDIWAQSKPGQG"
BASE COUNT          700 a          909 c         1067 g          632 t
ORIGIN      
        1 gacctttaca aagagctggc gggtgagagc gtggtgggaa cgaactacac tccgccgttt
       61 tcactgaccc ttgacgcgaa cgcgcacctt tccggcggga acctcacagg gcgctgggcg
      121 cggaaatatg acaacggcgg cgacctgcaa ctggaagcgt actatgaccg cgccaaccgg
      181 cacgaaccga actttggcga catccgcgat acgttcgatg tggattttct ggcgcaccgg
      241 ccgctgccgg gaaaacagcg cctctcattc gggtcgggcg cccggttcac gcgcgtaaac
      301 gagctggtgg tagttaccgg gctcacgttt gatccgcggg agctgacgga ccggctggtg
      361 acaggctttg tgcaggacga gatcacgttt gtgcccaatc gcctgcaact gattggcggc
      421 acaaaactgc tgaacaccaa ttttgccgac ctggagtttg aaccgaacat ccgcctgctg
      481 tttacgcctt ccaagacgca gtcattctgg gccgcgttta cccgggctgt aagaacgccg
      541 gcagatgtgg agcgggactt tttcctgagc ggctttgtgg gaactgctcc gggcggcatt
      601 ccgttcctgg cgcgtttcaa tgccaaccgc aacttcaagc cggaaaagat gaacggctat
      661 gaggcgggtt accggcgact gctgggcaag aacctatatg tggacctggc ggcattctat
      721 aaccagtatt ccgacctgtt cagccaggag attacagggc cgccatttct ggaaaccaca
      781 ccgccgccgc tcaaggacaa tattcccgcg gtgccgcacc tgctgcttcc agcgcagttc
      841 ggcaatgggc tgaaaggttc aacatcaggg attgaagtgg cgccagaatg gaagccagcc
      901 agcttctggc ggctgcgagg gtggtactca ttcctggcga tgcacattga aaagagcccc
      961 aactcgattg atatcggaac gtctccgggg attgaaggct ccagtccggg ccatcaggta
     1021 ttcgcgcagt ccagcttcga tcttccccac aaagtcagct tcgatcttct ctaccgctac
     1081 gtgagcgcgc taccgggcca gggcgtgaag ccgtactcct ccggagacat aacatcgtca
     1141 tgggccatga gcgatcacgt caccttgatg gtggttggcc agaacctgct gcggccacat
     1201 catgctgaat ttgggggcga cccgaagagc atagtggaga tcaggcgcgg agtttacggg
     1261 aagctcacat tcacgaagta gccagcctga agatgacatt gagaaagttc agcagatacc
     1321 ggtgccgcaa gagggaccgc agcaacgcgc tccagcgagc cgtggctgcc gccgccgtgc
     1381 tgctgctctc cgcctgcatg ctgaactccc gggcgacacc tccggcaagt acggaatacg
     1441 aagtgaaggc tgcatacctg ctgaactttg gcagattcgt gcgctggccg ggagcaaggg
     1501 cggtggcaag cggacaaact ttcccggtct gcgtgatggg agaagaccct tttggggcga
     1561 tcctggacgc cacggtccgg gacgagaaaa ttgagaattt ggcggtaatc gcaagccggg
     1621 tgagcacgcc ccaagaggcg tcaggctgca agatactttt tctcagccgt tccgagcagg
     1681 ggcaggcgcg caagacaatg gcggcgctca agaacgccgg agtgctgacg gtaagcgaca
     1741 tgcccgattt tctggagcgc ggcggaatca tccagttcgt gatccggggc aacaaagtac
     1801 gctttgaggt gaacctggat aatgcccagg aggcgggact cacactcagc tccgagctgc
     1861 tgaaagtggc tgacgcggta cacggcaagc gcagcggagg tggaggacga tgacttccat
     1921 ctcccgccgg ctgacgctga tgaacctgct ggtgagcgcc tcagcattgc tactggcgag
     1981 caccgggttc ctgctttacg accagttcac gttccggcag aacctggtac gcagcctttc
     2041 ggctgaggca gagatcgtgg gagccaacag cgcgtccgcc ctgatgttca atgatccgca
     2101 gtctgccgag cgcacgctgg agcccctaaa ggcgtttccg aatatccgcg cggcaggcat
     2161 ctatacgccg gatggccggg tatttgcgcg tttttcaggc gcgcaagcgg ccattccgca
     2221 ggtgccggag ggccgggtag agatagccga gttcagttct gatgaagtgg tggtggtgcg
     2281 gcagattgtt tttcagggga agacgctggg atcagttttt atccgatcga acctgagcga
     2341 gctttcacac cgcctttcgc ggtatctgct gatcgccggg attgtgctgc tgatctcgtt
     2401 gctggcggcg tggctgatct ccagccggta ccgtgaaagc attgccgggc cggtggtgag
     2461 cctggcaaag acggcgcgcg cggtttcgga ggaaaagaac tactctctgc gggcgaaacc
     2521 gaccaacgat gctacagaaa ccgggatgct ggtaaatgcg ttcaacgaga tgctgcagca
     2581 gattcagagc cgcgatgaag cgctgagaga ggcgcatgac gaacttgagg cgcgggtggt
     2641 ggagcgcacg cggcagctgc tggtggcgaa ccgcgagctg gaggcatttt cttattccgt
     2701 gtcacatgac ttgcgggggc cgctggaaac gatcaacgga tatgtccacc tgatcatcac
     2761 caagcccggg gtgaacctgg atgcggacac gcgagagagc ctgggccagg tgcaggcagc
     2821 ggcaaggcgg atggcggaac taattgacga tttgctgaat ctttcccgag tgacgacgac
     2881 ggcgatgcac gtggagcggg tggacctctc cgcgctggcg ctctcagtgg cccaagacct
     2941 gaaacggcgt gacccggcga ggcaaattga ttttgtgatc cgagaccatt ccccagcaca
     3001 aggcgacccg cggttactgc agattgtgct ggaaaacctg cttcgcaatt catggaagta
     3061 cacgagcggc cgggaacatg cggtggtgga gtttggatac gagcggcgcg cgaacgccga
     3121 tgtgttcttt gtccgtgaca acggagtggg ctttgatccg acgcaggcgg aacggctgtt
     3181 caagccattt caacggctgc actcggaggc ggaatttccg ggaacgggcg tgggactggc
     3241 aacggtgcag agaatcatag aacgccatgg cggcgacatc tgggcgcaaa gcaagccggg
     3301 ccagggag
//
LOCUS       DASQYP010000189         6716 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_135169, whole genome shotgun sequence.
ACCESSION   DASQYP010000189 DASQYP010000000
VERSION     DASQYP010000189.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 6716)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6716)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6716
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_135169"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            62..1126
                     /locus_tag="VE783_06095"
     CDS             62..1126
                     /locus_tag="VE783_06095"
                     /inference="COORDINATES: protein motif:HMM:NF012692.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ROK family protein"
                     /protein_id="HYX53002.1"
                     /translation="MGNFAIGVDLGGTNLRIAAVDTSGRVLEKITTGTQVNRGRDHVI
                     FEMCSAIHDLAAKFRGAGHLEGIGIGVPGIIEMQTGMLRESPNLPGWQDYPVKEEIER
                     RLSTHVILENDANSAALGEKWLGAAANVDDMCMITLGTGVGGGVVLQGRIWHGMTGMA
                     GELGHINVDPEGPACGCGSRGCVEQYASATAVKRMAIEAIATGAAPELSRAMNEEPEF
                     SSKVVYQMAVQGDQPAKQIFERVGRALGCVLGDMVNVFNLPMYVIGGGVASAWEAFAP
                     TMLEEVRRSSFVYRATAPAEVVKGVDGTGIHDDALPGRRSTIITRALLGSDAGLIGAA
                     RLPMISRDVKLPEQELRKIG"
     gene            complement(1188..2180)
                     /locus_tag="VE783_06100"
     CDS             complement(1188..2180)
                     /locus_tag="VE783_06100"
                     /inference="COORDINATES: protein motif:HMM:NF013696.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /protein_id="HYX53003.1"
                     /translation="MDPVRLTRKLIDIESISGNEGAVGAELYDELCRLGYTAHKMPVA
                     HERFNVIATLDDRPPQLVFSTHMDTVPPFFPSSEDHDNIYGRGSCDAKGIIAAQITAC
                     QKLRKEGAAVGMLFVVGEERDSLGAKVANQTPPGCRYLINGEPTENRIAVASKGALRV
                     EVTATGRMAHSAYPELGESAIDKLITALDRLRGMKLPENPEVGPCTLNIGLIEGGRAP
                     NVIPDHARAQLLYRLVGPSDELRRQITATVAGLASAEFTLEIPFMKLQTIPGIPTMVA
                     AFTTDIPALSSWGTPVLLGPGSIHVAHTEREHLPKKQLHHAVELYCTLARQLLQ"
     gene            complement(2474..3124)
                     /locus_tag="VE783_06105"
     CDS             complement(2474..3124)
                     /locus_tag="VE783_06105"
                     /inference="COORDINATES: protein motif:HMM:NF012381.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53004.1"
                     /translation="MEKKVPGAFTPVRRSPFELLPTGVEKLDREIGGLPLGGLSQLCA
                     PSDMTTGRTTVMVSTMAQLTRKGRFCALVDANDAFDPIGAQEMGVDLRRVLWFRGRRT
                     PELTVLEQAFKAADILVNNGGFELIFVDIADVPEEEVRRVPMTTWFRFARVVEKHEMG
                     LVFLLPYAAAQSCAALTVQMKQAKILWQGPEFPAHALLFAGLEMDFEVERGRRDIG"
     gene            3491..4471
                     /locus_tag="VE783_06110"
     CDS             3491..4471
                     /locus_tag="VE783_06110"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53005.1"
                     /translation="MRFISSLFISSLFLLLAVNCGAAQQQEPKPESTPAQQAEQDGAG
                     GQKQSPAPEAQPSSSPEAQASPSPAPQPNTGTPDTSAPATSPSPAPQTSTGPQAPAAP
                     GATPATAIPQVLTTPAGTPALEQGVPQSKKQPKRILGIMPNYRAVSAGEIPPPPTAMQ
                     ALKVATQNSFDYSSFMFVGVTSAIAEGTNAHPQLGKGIDGFGKYYWRGFVDKTDGNYL
                     VIFALPTVFHQDERYYAMGQGGFWKRAAYSSSRVLITPNYHGHNTFNFSEVLGRGIAQ
                     GISREYYPSNDRSLGALAVKYGYAIGRDAATNMFREFWPDIATHVLHRHP"
     gene            4872..>6716
                     /locus_tag="VE783_06115"
     CDS             4872..>6716
                     /locus_tag="VE783_06115"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53006.1"
                     /translation="MGAGTADATVASLQKTFKLDPNILGPNSAESVAVSGATDADVLQ
                     AILSNTAFPTRPNGQLPLGSIDLEASGGKQVAFTAGPSGTVSFDFSASFKAGVGVFDQ
                     PQAALDSLGLDSAPGLDLTVSGGPADRYLLMLLGYKAAGSFSGTHPIGAIGSVTFGAQ
                     ASGDQLFAVLHRFPGSTGAATALGDTVTSWRLPRQVKQPTDLKPGSWVIAQADGSVAI
                     QLAAQVGYDFNFVRQANLLGMSRSLGAKIDAGLKASFGFSASGSYLVIVGREKDDTQV
                     RLRLFKQKDQGFDFGLNLNVGVTGRADFPKDIDDLVEAVFGVHGQQVVKDLHLIEQWT
                     DPSKDLGDTVARLINKTGLELLTKATGIDAAKEFDKARQMVLDAFKQWDALPDRASAV
                     IWKILDRAPAADVDVFKNVLTDLANPDPTVRSQALAKEIAQVAFGDSPQGQWLEAIAD
                     QGLLALTNQLDVVQKAAAQTLNVLDGGVIKNLQDFINQRLDLNQIRKVVTQDDFNKVD
                     EWLIKRLSDFLDQKLDFAALKQIQTAISTVLQKVQSIYARVIEALNNKYNLSFAATYQ
                     KNTSDTALLDVNFDLAKPEAAALLGDVLNKSRLDTLLVTPTPGVSLNKA"
BASE COUNT         1420 a         1944 c         2126 g         1226 t
ORIGIN      
        1 agcgcgggtt ttcgatacac ttgtgagcat cattgagggc gtggggtgat tccaagtgga
       61 gatgggaaac tttgcgattg gcgttgatct gggtggcacc aacctgcgga ttgccgcggt
      121 agacacgtca gggagggtgc tcgagaaaat cacaaccggc acgcaggtga accgcggccg
      181 cgaccacgtg atctttgaaa tgtgcagcgc gatccatgac cttgcggcca agtttcgcgg
      241 cgcggggcac ctggagggaa tcgggattgg cgtgcccgga atcattgaga tgcagaccgg
      301 catgctgcgc gagtcgccga acctgcccgg ctggcaggac tatccggtaa aggaagaaat
      361 cgagcggcgg ctgagcacgc acgtgatcct ggaaaacgat gccaactccg cggccctggg
      421 cgaaaagtgg ctgggcgctg cggccaacgt tgacgacatg tgcatgatca cgctgggcac
      481 cggcgtaggc ggcggagtgg tgctgcaggg acggatctgg cacggaatga ccggcatggc
      541 cggcgaactg ggacacatca atgttgatcc tgaagggccg gcgtgcggct gcggcagccg
      601 tggatgcgtg gagcaatatg cctccgccac cgcggtgaag cgcatggcca ttgaggcgat
      661 tgccaccggc gccgcgcccg agctttcccg cgccatgaat gaagagccgg agttcagctc
      721 caaggtggtt taccagatgg ccgtgcaggg tgaccagccg gccaaacaga tttttgagcg
      781 cgtgggccgg gcgctgggtt gtgtgctggg ggacatggtg aacgtcttca acctgcccat
      841 gtacgtgatt ggcggcggtg tggccagcgc gtgggaggcc tttgcgccga cgatgctcga
      901 agaagtgcgc cggagctcgt tcgtgtatcg cgccaccgcg ccggcggaag tggtaaaagg
      961 cgtggacggc actggtattc acgatgacgc gctgcccgga cgccgcagca ccatcatcac
     1021 ccgcgcgctg ctcggcagcg atgcagggct tattggcgcg gcacgcctgc ccatgatcag
     1081 ccgggacgta aagctgccgg agcaggagct gagaaaaatc gggtgatcgg gagatcgggt
     1141 gatcgggtga tcgggaaaaa gcgctcagcc cctgagactg ctgaatgcta ttgcagcaac
     1201 tgccgagcca gcgtgcagta aagttccaca gcgtggtgga gctgcttctt gggcaggtgc
     1261 tcgcgctcgg tgtgggccac gtgaatggag ccggggccga gcagaaccgg cgttccccat
     1321 gagctgagcg caggaatgtc agtggtgaaa gcggccacca tggtgggaat gccgggaatg
     1381 gtttgcagtt tcatgaatgg gatttccagc gtgaactcag cactggccag accggcgacg
     1441 gtggcagtga tctggcgccg caactcgtcg gatggtccca ccagccggta gagaagctga
     1501 gcgcgggcgt gatcggggat gacattgggc gcgcggccac cttcaatgag cccaatgttc
     1561 agcgtacagg gaccaacctc aggattttcc ggcagcttca tgccgcgcag gcggtcaagg
     1621 gcggtgatga gcttgtcgat ggcggattcg cccagttcag ggtaggccga gtgcgccatg
     1681 cggccggtgg cggtaacttc cacacgcagc gcgcctttcg aggcgacagc gatccggttc
     1741 tcggtgggct caccattaat aaggtagcgg cagccgggcg gagtctggtt ggcgaccttc
     1801 gctcccaggc tgtcccgctc ttctcctacg acaaaaagca tgcccactgc tgcgccttcc
     1861 ttgcgcagct tctggcaggc cgtgatctgc gcggcgatga tgcccttggc gtcgcaggat
     1921 ccgcggccat agatgttgtc atgatcttcc gatgacggaa agaacggtgg cacggtgtcc
     1981 atgtgggtgg agaagacaag ctgcggcggg cgatcgtcga gcgtggcaat gacgttgaag
     2041 cgctcatggg ccaccggcat tttgtgcgcg gtgtagccga ggcggcagag ctcgtcgtaa
     2101 agctcggcgc ccacggcgcc ctcattgccg ctgatggatt caatgtcaat cagcttgcgg
     2161 gtaagacgga cgggatccat gggtagacag gataaatgag ggagcgagga tcgggtgatc
     2221 gggtgatcgg gagatcgggc gatcgggaaa ccgaaactag aacacctctg aaacgcagag
     2281 gaacagggga cccagaggtc acaaaataga aacacgtgca tgaagaagag acaggcctgc
     2341 ggcaacgtag acgctcgcag gcagcttaaa gagaagccgt gacgaggtga tgaggagagg
     2401 aagcaggtac ttctgtggag gttctgcttt ctgtttccga tatcaagggt cctgcgatca
     2461 ccggatcacc cgatcaaccg atatctcgtc tgccgcgctc cacctcaaag tccatttcca
     2521 gcccggcaaa aagaagcgca tgcgctggga actccggacc ctgccagagg attttggcct
     2581 gcttcatctg cacggtaagc gcggcgcagc tctgtgcggc tgcatacggc agcagaaaca
     2641 ccagccccat ctcatgcttt tccaccacgc gggcaaagcg gaaccatgtg gtcatgggga
     2701 cgcgccttac ctcttcctcc ggcacgtctg ctatgtccac aaaaatcagt tcaaagccgc
     2761 cattgttcac caggatgtcc gcggctttaa aggcctgctc cagaactgtg agctcgggcg
     2821 tcctgcgccc gcgaaaccac agcacccgcc gcaggtccac gcccatctcc tgggcaccga
     2881 tgggatcgaa agcgtcattc gcatccacca gcgcgcagaa gcggcctttc cgtgtgagct
     2941 gggccatggt ggaaaccatg acggtggtgc gtccggtagt catatcagaa ggcgcgcaga
     3001 gctggctgag tccgcccagc ggcaggccgc caatctcgcg atcaagcttt tcaaccccgg
     3061 tgggcagcag ctcaaacggg ctccgcctga ccggcgtgaa tgcgccaggg accttctttt
     3121 ccacctgcgc ccggatttcc tccagagtcg gcacagagtt cattataggc gaaaataaaa
     3181 cgaagtcaat aagagatcgc cgtaatcgcc gtaatggcgc gtaatcgccg aatcggagaa
     3241 gcgtatcagc actcaaacag cagcgctctc gacgccgacg gcaaagcctt atgtcgcagg
     3301 cctcgggtta aggtcgcagg agttctactg ctgccgtgat cagcattatt cctgattcac
     3361 ctctacggct tatctgaata cgataaaatc agcatcaact tccgttctgt gttcatcact
     3421 ttaccgtgcg ccgaggcatg ttcggcggcg ggagagattt acgcgaaggg gcctggatct
     3481 ggaggagcgt gtgcgtttta tcagcagtct ttttatcagc agtcttttcc tattattggc
     3541 agtgaactgc ggggcggcgc agcagcagga accgaagccg gagtcaacac cggcccagca
     3601 ggcagagcag gacggggccg gcggacagaa gcagtcaccc gcgcctgagg cccagccgtc
     3661 atcttccccg gaagcgcagg cttcgccatc gcccgcacct cagccaaaca ccggcacgcc
     3721 ggatacgagt gcgccggcaa ccagcccgtc gcctgcgccg caaacttcaa ccggtccaca
     3781 agccccggca gctcccgggg ccacgcctgc cacggcaatc ccgcaggtac taaccacgcc
     3841 ggccggaact ccggcgctgg agcagggcgt gccgcaatcg aagaagcagc ccaaacgcat
     3901 ccttgggatc atgccaaact atcgggcggt gagcgccggt gagattccgc cgccacccac
     3961 ggcgatgcag gcactgaaag tcgccaccca gaacagcttc gattattcct cctttatgtt
     4021 cgtgggcgtg acttccgcga ttgcggaggg cacaaacgcg catccgcagc tggggaaggg
     4081 gattgatggg ttcgggaaat attactggcg cggctttgtt gacaagactg acggcaacta
     4141 cctggtgatc tttgccctgc ccaccgtctt ccaccaggac gaacgctatt acgccatggg
     4201 ccagggagga ttctggaaac gcgccgctta ttcgtcgtcg cgcgtgctga tcacgcccaa
     4261 ctatcacggg cacaacacct tcaacttctc tgaggtgctg ggacgcggca ttgcccaggg
     4321 catctcccgc gagtactatc ccagcaacga tcgcagtctg ggcgccctgg ccgtgaaata
     4381 cggctacgcg atcgggcgcg acgctgcgac caacatgttc cgcgagttct ggccggacat
     4441 tgcgacccac gtgctgcacc ggcacccgta gaatcgggtg atcggaaaaa acaaatgctc
     4501 accactgatc tgcactgatg acactgatcg gaccagcgaa ggctaccgcc aggtcaacac
     4561 ggattaacgc ggattcgatc aagggcggag cttcccgggt acgtgctccg cgtgcaagtc
     4621 caggcaccgc cacacccctt tgaccgccac cttagttcgg aaccaggcgg agcgctacgc
     4681 ggtcgcgcgc aaaaaatatt tacaaaactg caacggttta agtctggttt tcacgctaat
     4741 aaagaagagc agcttttttc agtcacacgg cagcttgttt gacgccgtgt cggccaggga
     4801 ggatactggc agacaatccc ctttggcatg ctccgtcttc caccaacttt atccagcgca
     4861 aggaggattt catgggcgcg ggaacagcag atgctaccgt tgcaagccta caaaagacgt
     4921 tcaagctaga ccccaacatt ctggggccga acagcgcgga gagcgtggcc gtgagcggcg
     4981 ccactgacgc cgatgtgctt caggccatcc tttctaatac agcgttcccc acacggccga
     5041 acgggcagtt accgctcggc agcattgacc tggaggccag cggcggcaag caggttgcgt
     5101 ttaccgcagg gccatcgggc acggtgagct tcgatttttc ggcttccttc aaggctgggg
     5161 tgggagtttt tgaccagccc caggccgcgc tcgattccct gggcctggat agcgctccgg
     5221 gactggattt gacagtttcc ggcggaccgg ccgaccgcta cctcttgatg cttctcggct
     5281 ataaagctgc cggctctttt tccggaaccc acccaatcgg cgcgataggg tcggttacct
     5341 ttggagcaca ggcttccggc gaccagctgt ttgctgtcct gcaccgcttc ccgggaagta
     5401 ccggcgcggc aacggcgctg ggagacacgg tgacgagctg gcgtcttccg cggcaggtga
     5461 agcagcccac ggacctgaaa ccggggagct gggtgattgc gcaggctgac ggctccgtgg
     5521 caatccagct cgccgcccag gtgggctacg acttcaactt tgtccgtcag gcgaacctgc
     5581 tcggaatgag ccgctctctg ggcgcaaaga ttgacgccgg gcttaaggcc agcttcggct
     5641 tcagcgccag tgggagctac ctggtaatcg tcggcaggga aaaggacgac acgcaggtcc
     5701 ggctgcgcct cttcaagcag aaggaccagg ggttcgattt cgggctgaac ctgaacgtcg
     5761 gcgtgaccgg acgggccgat ttccccaaag atatcgatga cctggtggaa gctgtcttcg
     5821 gcgtgcatgg ccagcaggtg gtgaaagacc tgcacctgat tgagcaatgg acagacccga
     5881 gcaaagacct gggcgacacc gtggcgcggt tgatcaacaa gacaggactg gagttgctga
     5941 cgaaggcgac cggaatcgac gccgcaaaag agttcgacaa ggcgcggcag atggtgctgg
     6001 acgctttcaa gcagtgggac gcgctgcccg atcgcgcttc cgccgtgatc tggaaaatcc
     6061 tggatagagc gccggcggca gatgtggacg tattcaagaa cgtgctgacc gacctggcga
     6121 acccggatcc cacggtgcgg agccaggccc ttgccaaaga gattgcgcaa gtggctttcg
     6181 gcgattcgcc gcaagggcaa tggctggagg caatcgccga ccagggactg ctggcgctta
     6241 ccaaccagct cgacgtagta caaaaggcgg ccgcgcagac gttgaacgtg ctggatggcg
     6301 gcgtaatcaa gaacctgcag gacttcatca accagcggct ggacctgaac cagatccgca
     6361 aggttgtgac gcaggatgac ttcaacaaag tagacgaatg gctgatcaag cggctctcag
     6421 attttctgga ccagaagctt gatttcgccg cgttgaagca gattcagacc gcgatctcta
     6481 ccgtgctcca gaaagtgcag agcatttacg cgcgggtgat tgaagccctc aacaacaaat
     6541 acaacctctc tttcgccgcc acctaccaga agaacacgag cgacacggca ttgctggatg
     6601 tgaactttga tctggcgaag cccgaggctg ccgccctgct gggcgacgtt ctcaacaaga
     6661 gccggctgga tacgctgctg gtgacgccaa cgccgggcgt gagcctgaac aaggcg
//
LOCUS       DASQYP010000190         7427 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_282277, whole genome shotgun sequence.
ACCESSION   DASQYP010000190 DASQYP010000000
VERSION     DASQYP010000190.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 7427)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7427)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7427
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_282277"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            118..831
                     /locus_tag="VE783_06120"
     CDS             118..831
                     /locus_tag="VE783_06120"
                     /EC_number="2.1.-.-"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HYX53007.1"
                     /translation="MRHWRDSVSHYGLWHTLKQLAEAFYGFLRELLPDRRKARFGDLD
                     YDWGHNVDTTRSNVSLRTQLLAALTAHQYFPTEPWLFTEIMQALPAEKSKFSFIDMGS
                     GKGRVLLMASAYDFKRIIGVEFVPEWHRVAEENIQKFTAEQMPTMPITSVCMDARDFQ
                     FPVDPLVIYLFNPFPEPVLAAVLDQLRDSCNRVPRDIFVAYRYPEFDHLLKTGDWLQS
                     IAGTEQWAVYRNWRSGDRG"
     gene            complement(963..2771)
                     /locus_tag="VE783_06125"
     CDS             complement(963..2771)
                     /locus_tag="VE783_06125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018036474.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylmalonyl-CoA mutase family protein"
                     /protein_id="HYX53008.1"
                     /translation="MADHTRKHPPQSTIAESPAAEIFESRRPSESEKQWAEKTLAPTL
                     EKAPEKPVGAATGTNLDENGNARFTTISGIPIRRLYTEGDLPADWTYDQYLGYPGQAP
                     YTRGIHASGYRGKLWTMRQFSGFASPEETNERYKYLLAQGGGGLSVAFDLPTLMGYDS
                     DHAASEGEVGKCGVAIDSLEDMEILFNGIDLEKTTVSMTINSPASVLWAMYLVVAEKQ
                     GADWKKVSGTIQNDILKEYIAQKEYIYPPAPSMRLVIDTFEFGSKFTPRFNTISISGY
                     HIREAGSTALQELAFTIYDGVEYVEWARRRGLDVDEFGPRLSFFFNSHNDFFEEIAKF
                     RASRKIWYRLMKDRFGAKQQRTWLMRFHTQTAGVSLTAQQPLNNIARVAIQALAAVLG
                     GTQSLHTDSYDEALALPTAEAARIALRTQQIIAYESGAGQTVDPLGGSYFVEKFTLDM
                     EKGAFDYFDKLDALGGMVKAIEIGYPQKEIAEASYQYQRAVEAREKIVVGVNDFAIEE
                     KQPDTLYIDETVAERQTAKLKALRARRKNEEVRRSLEALKHAAAQEPVVPKDGSISDA
                     NTMPYIIDCVRAYATVGEICEALRQVYGTYEEVSIT"
     gene            complement(2824..4782)
                     /locus_tag="VE783_06130"
     CDS             complement(2824..4782)
                     /locus_tag="VE783_06130"
                     /inference="COORDINATES: protein motif:HMM:NF024371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3857 domain-containing protein"
                     /protein_id="HYX53009.1"
                     /translation="MRHVRKLRAAAFTLMMLTALYCMAADNRTWAPVDPQDLKMTEFK
                     AVPGADAVLLAYANEIDDVAHREYVCERIKVLTDSGKHFGTVEIPVTDKASIKELYAR
                     TVHPDGSIVEFVGEPFDKVVVKGRGIRVRVKAFTLPQITTGSIIDYRYELHYGDKWLR
                     HHEWKVQHEIYAVKESYLFKYDKRYSIRWLPSPGLDRSPDNDTKAGILKMQAENIAPF
                     ESEEQMPPEASYRMRVRFFYTSPYMSSPSSYWYEVGRAVSRYLDAYIGDSKDVRAAAS
                     EVIGSETDPVKKLQKLYARAQQIRNLSYERSRTQAEHKKEELKENKNIADVLKHGYGN
                     RDEITRLFVGLAKSSGFTASVVFVSSRESRLFDREVLEFSQLDSEVAEVRLNGKTLLL
                     DPGTRFCPYGIMRWMRTGTAAMNMADPGALVATPGAGPEAAVVSRSAEMDLNSDGSVK
                     GEVRIEFSGSDALERRLAALDTDDAGRKKELEEELKQWLPVNAKVELTQSQGWETENG
                     PLTAIFSVEVPEFASAAGKRLLVPAALFRPRNKTVFKNAPRKYPVYFQYAFTEADSLA
                     LKVPEGYSIEKMPSPQSLKGKLGGYSIEPVSTASGLSVQRSMLLYGVFFQPERYEELR
                     NLFTIVQIGDDTQTVLRLKSATEQSKAN"
     gene            complement(4800..6761)
                     /locus_tag="VE783_06135"
     CDS             complement(4800..6761)
                     /locus_tag="VE783_06135"
                     /inference="COORDINATES: protein motif:HMM:NF024371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3857 domain-containing protein"
                     /protein_id="HYX53010.1"
                     /translation="MRNQVIKSVIALLCAVMLSSVAKAGVPDWLRSAAQQPAKKYADD
                     VNAVVLLHETETTVKDNGEIVTRERKVVKVLRPEGREAAFQFVPFDDETRLNYFKGWS
                     ISARGQEYEARKDDIVEISGVNQTELYSDAKYKAMRIPGVDVGTVVGVEWEQKKHPFT
                     FEDQWMFQRYEPVERARYLLHLPGNWEYRAAWMHHAEQAPSTQGNSYLWEITDIPRIE
                     KEDEMPHYRALAGQLVVTFFSEKTKGRSYAKWSDFAAWYSQLTAGVRDSSAPMEQKVG
                     LLAPSNEPLLQRIQELARFAQRDIRYAAIEIGIGGLQPHAASQVFNNRYGDCKDKATL
                     LSSMLARIGVKSYYVLVHTDRGIYSDKTPPTIGFNHVILAIQLPQGSFKEQMPALYEH
                     PALGHLLIFDPTSTVVPFGQIPSYEQDNYGLLVSDGGGELIHLPVSPPELNRMSRTAK
                     LTIQPDGSLKGEVQEVRTGWQAAEGRYLYEKQTVADRRKVLERFLGHMLGNFQLDSVE
                     AENLDEIDKDLIIKYKFSADHYAKNAGSLMLVRPRVLGEKLGALDSTKPRHYSYSFDA
                     PTLQTDLFEFNLPAGYKVDELPDPAKADFTFGEYRSKIENSGDSLKYSREYKIKATSI
                     PAEKISDLNKFFHEINQDERNMAVLKKAN"
     gene            complement(6742..7371)
                     /locus_tag="VE783_06140"
     CDS             complement(6742..7371)
                     /locus_tag="VE783_06140"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53011.1"
                     /translation="MDSEGALKGDILVKYTGSEALERRLDANDTDAVGFNKQLEDELK
                     ALLPNGASVKAVKVEGTEGSAEPLLASFSVEVPSFGSITGKRMLLPSSLFQGSRKSAF
                     QAVTRKFPVYFAYAYAEIDNLKLKIPAGYKLETAPANADAGIPYASYHNEVSVNGSEL
                     AAHRELKMNGVFFKVDQYGEVRDFFSRVQAGDEQQAVLQGGALSAQSGN"
BASE COUNT         1504 a         2173 c         1975 g         1775 t
ORIGIN      
        1 aggatggcat cagatttttt aagatgattc tgggccttac gcatgactga ttcccatcta
       61 agcacaccgc cggccgcttt gcacccgcaa actgagttca gcttccggaa ggccttcatg
      121 cggcactggc gcgatagcgt cagccattac ggcctctggc acactctcaa acaactggca
      181 gaagcattct atggcttcct ccgcgaactc ctgccggacc gccgcaaagc ccgcttcggc
      241 gaccttgact acgactgggg ccacaacgtc gacactactc gttccaatgt gagcctgcga
      301 acccagctgc tggcggctct taccgcccat cagtacttcc ctaccgagcc ctggctgttt
      361 acagagatca tgcaggcact cccggcggag aaatcgaagt tctctttcat tgacatgggt
      421 tcagggaagg gacgcgtcct gctgatggcc tcagcgtatg acttcaagcg gatcatcggg
      481 gtggaattcg tgccggagtg gcaccgagtg gcggaagaga acatccagaa gtttaccgcc
      541 gaacaaatgc ccacaatgcc catcaccagc gtctgtatgg atgcccgcga ctttcagttc
      601 ccggtggatc cgctggtcat ctaccttttt aacccgtttc ccgaaccagt gctggccgcg
      661 gtgctcgatc agctgcgcga ctcatgcaac cgggtgccgc gcgatatttt tgtggcctat
      721 cgctatcccg aatttgatca tctgctcaag accggtgact ggctacagag catcgcggga
      781 acggagcagt gggcagtgta caggaattgg agatcgggtg atcgcgggta atcgggaagc
      841 gcttcctggt tcgcggaata ctctgagcac gaaatgctca tgactaattc gcagtcatta
      901 gcccgaatag tcccatcagt ggcatgagga tttcagatca ccagatcacc agatcacccg
      961 atctacgtaa tgctcacctc ttcatacgtc ccatacacct gccgcagggc ttcacagatc
     1021 tcgcctaccg tggcataggc acgtacgcaa tcaatgatgt aaggcatcgt attggcatca
     1081 ctgatgctgc cgtccttcgg caccaccggt tcctgcgccg cagcatgctt cagtgcctcc
     1141 agggaacgcc ggacttcctc gttcttgcgg cgcgcgcgca atgccttgag cttggccgtc
     1201 tggcgctcag caaccgtttc atcgatgtag agagtgtcgg gctgcttctc ttcaatggca
     1261 aagtcattca cgcccaccac tatcttctcg cgggcttcta cggcgcgctg gtactggtac
     1321 gaagcctcgg caatctcctt ctgcggatag ccaatctcaa tggcctttac catgccgcca
     1381 agcgcatcga gtttgtcaaa gtagtcgaat gcgccctttt ccatgtcgag cgtaaacttc
     1441 tctacaaagt acgagccgcc cagcgggtcc acggtctgcc ccgcgccgga ctcgtaggcg
     1501 ataatctgct gcgtgcgcaa cgctatgcgc gccgcttcag ccgtgggcag cgccagcgct
     1561 tcgtcgtagg agtcagtgtg gagcgactgt gtaccgccca gcaccgccgc cagtgcctga
     1621 atcgccactc tggcgatatt gttcagcggc tgctgcgccg tgagcgagac gccggctgtc
     1681 tgcgtgtgga aacgcatcaa ccatgtgcgc tgctgcttgg cgccaaaacg gtccttcatc
     1741 agccggtacc agattttgcg ggaagcgcgg aacttggcaa tctcttcgaa gaagtcgttg
     1801 tgcgagttga agaagaagct cagccgcggg ccgaactcgt ccacatcaag tccgcgccgt
     1861 cgcgcccatt ccacgtattc cacgccgtca taaatagtga acgccagctc ctgcagcgcc
     1921 gtggagccgg cctcccggat gtgatagccg ctgatggata ttgtgttgaa gcgcggcgtg
     1981 aatttggaac cgaactcaaa ggtatcgatc accaggcgca tggaaggcgc cggaggatag
     2041 atgtattcct tttgagcgat atattccttc agaatgtcat tctggattgt gcctgagact
     2101 tttttccagt ccgcgccttg cttctccgcg acaaccagat acatcgccca taaaactgat
     2161 gccggcgagt taatggtcat ggagacggtg gtcttctcaa gatcgatgcc gttgaacaag
     2221 atctccatgt cttccagcga atcgattgcc acgccgcatt tgcccacttc gccttcgctc
     2281 gcagcgtgat cggagtcgta ccccataagg gtgggcagat cgaatgccac cgaaagtccg
     2341 ccgccaccct gggccagcag gtacttgtat cgctcgttcg tctcctcggg cgacgcgaag
     2401 ccggagaact gacgcatcgt ccagagcttg ccgcgatagc cactggcatg aataccgcgc
     2461 gtgtacggcg cctggccggg atagccaagg tattggtcgt aagtccagtc ggctggcaga
     2521 tcgccttccg tatagagtcg gcggatcgga atgccgctga tcgtggtaaa gcgggcattg
     2581 ccgttttcgt ccaggttggt ccccgtagca gcgccaaccg gcttctcagg agctttctcc
     2641 agcgtaggag caagcgtctt ttccgcccac tgcttctccg attctgacgg tcggcggctt
     2701 tcgaatatct ctgccgccgg gctttccgca atcgtgctct gaggtgggtg tttccttgtg
     2761 tgatctgcca tatctctctt caatgataga agatgcagaa aagaggcggc aagacgcgat
     2821 ttatcagtta gctttgctct gctccgtggc tgacttcaga cgaagaacag tctgggtgtc
     2881 gtcgccaatc tgcacgatcg tgaacagatt tctcagctcc tcatacctct ctggctggaa
     2941 gaacacgcca taaagaagca tggagcgttg cacgctgaga ccactagcgg tgcttaccgg
     3001 ctcaatcgag taaccaccca gtttgccttt aagggactgc ggggagggca ttttttcaat
     3061 cgaatagcct tccggcacct tcaaagcaag gctgtccgcc tcagtgaagg catattggaa
     3121 atacacggga tacttgcgtg gcgcattctt gaagaccgtc ttgtttcgcg gcctgaatag
     3181 cgcggcggga accaacaggc gcttacccgc agctgaggca aactccggaa cttccacgga
     3241 gaaaatagct gtcagcgggc cattctcggt ttcccatcct tgtgactggg tgagttccac
     3301 cttcgcattg accggcagcc actgcttcaa ctcttcttcc agttcttttt tgcggcctgc
     3361 gtcgtcggtg tcaagcgcgg cgagtctgcg ctccagcgcg tccgaaccgg agaactcgat
     3421 ccgcacctcg ccttttactg atccgtcgct gttcaggtcc atctcggcgg aacgcgaaac
     3481 caccgcggcc tcaggtcccg cgccgggcgt ggcaacaagc gccccgggat ctgccatatt
     3541 catggcggcc gttccagtcc tcatccagcg cataatgcca taagggcaga accttgttcc
     3601 cggatccagg agaagcgttt tgccattcag gcgaacctcg gcaacctctg aatccaactg
     3661 gctgaactcc aggacttccc ggtcaaacag cctgctttcc ctgcttgaga caaagaccac
     3721 cgatgcagta aaacccgagc tcttggccag accgacaaac agtcgcgtga tctcgtcgcg
     3781 attgccgtat ccatgcttga ggacgtcggc gatgttttta ttctctttca gctcctcttt
     3841 tttgtgctcc gcctgggtac ggctgcgttc ataagaaaga tttctgatct gctgtgctct
     3901 ggcatagagc ttctggagct ttttcaccgg atcggtttcg ctgccaatta cctcgcttgc
     3961 ggcggccctc acgtcctttg aatctccgat ataagcgtcc agatagcgag acacggctct
     4021 gcccacttcg taccagtacg aggaggggga actcatgtag ggactcgtgt agaagaagcg
     4081 cacgcgcatc ctatagctcg cttcgggagg catctgctcc tcggattcga aaggcgcaat
     4141 attctcggcc tgcatcttca atatgccggc tttcgtatcg ttgtcagggc tgcgatcgag
     4201 cccgggcgaa ggcagccatc gaatggaata ccgcttgtcg tatttgaaca ggtagctctc
     4261 tttaacggca tagatctcgt gctggacttt ccattcgtgg tggcgcagcc atttgtcgcc
     4321 gtagtgaagc tcgtagcggt aatcgataat gctgccagtc gtgatctgcg ggagcgtgaa
     4381 tgcctttacg cggacacgta tgcctcgccc cttcaccacc accttgtcga aaggctctcc
     4441 cacaaactcc acaattgaac catccggatg cacggtgcgc gcatacagtt ctttgatgga
     4501 tgccttgtcc gtgaccggta tttcgaccgt tccaaaatgc ttgccagagt cggttaggac
     4561 cttgatgcgc tcgcagacat attctctgtg ggccacatcg tcgatctcgt ttgcataggc
     4621 gagcaacacg gcatctgcac cgggaacggc tttgaactcg gtcatcttca ggtcttgggg
     4681 atcgaccgga gcccacgtgc ggttgtcggc cgccatgcag tacagggctg taagcatcat
     4741 caaggtaaat gccgctgccc taagtttgcg cacgtgtctc attcagaatc cggctctcct
     4801 cagttcgcct tcttcaatac agccatgttt ctttcgtcct gattgatctc atgaaagaat
     4861 ttgttcagat cggaaatttt ttccgctggg atcgaggtcg ccttaatctt gtactcccgg
     4921 ctgtacttca gtgagtcacc tgaattctca atcttgcttc tgtactcgcc aaaggtgaag
     4981 tcagccttcg ccggatcggg caattcgtca actttgtagc ccgctggaag gttgaattcg
     5041 aagaggtcag tctgcaaagt cggcgcgtca aaagagtacg agtagtggcg tggcttggtt
     5101 gaatccagcg ctcccaactt ttctcccagg acccgcgggc gcaccagcat gagcgagccg
     5161 gcatttttgg cgtagtggtc ggccgagaat ttgtacttta tgatcagatc cttgtcgatc
     5221 tcatcgagat tctcggcttc cacgctgtcc agttgaaaat taccgagcat gtggccgaga
     5281 aaacgctcaa gtactttcct gcggtcggcc accgtttgtt tttcataaag gtagcgaccc
     5341 tcagccgcct gccagccggt gcgaacctct tgaacctcgc ccttgagcga cccatccggc
     5401 tggatggtga gcttggcggt gcggctcatg cggttcagtt cgggcgggct cacaggaaga
     5461 tggatcagct cgccacctcc gtcgctcacc agcaatccat aattgtcctg ctcatacgag
     5521 ggaatctgtc cgaatggcac taccgtggag gtgggatcaa aaatcagcag atgccccagt
     5581 gcaggatgct cgtataaggc gggcatctgc tctttgaagc ttccctgcgg aagctgtatg
     5641 gccaggatta cgtggttgaa gccgatcgtc ggcggcgttt tatcggaata aattccacgg
     5701 tccgtgtgca ccagtacgta gtaagacttc acgccgattc gcgccagcat ggagctgagc
     5761 agggtggctt tgtctttgca atcgccgtag cggttattga acacctggct ggccgcatga
     5821 ggctgcaagc cgccaattcc tatctcaatg gctgcgtatc gaatgtcgcg ctgggcaaaa
     5881 cgagcaagct cctggattcg ctgcaacagg ggctcgttag aaggagccaa aagcccaact
     5941 ttctgttcca tcggcgcgga tgaatcccgg acgccggccg tcagctgaga gtaccaggcc
     6001 gcaaagtccg accacttcgc atagctgcgg ccctttgtct tttcggagaa gaaagtcacg
     6061 actagttggc cggcgagcgc ccggtaatga ggcatctcgt cttccttctc gattctgggt
     6121 atatcagtga tttcccagag atagctattg ccctgcgtgc ttggcgcctg ctcggcatga
     6181 tgcatccatg ccgcccggta ttcccagttg cccggtaaat gcagaaggta gcgcgcgcgt
     6241 tccaccggct catagcgctg gaacatccat tggtcctcaa atgtaaatgg gtgttttttt
     6301 tgctcccatt ccacgccgac cacggtcccc acatccacgc ctggaatccg catggccttg
     6361 tatttggcat cactatagag ctcggtctga ttcacccctg aaatctctac aatgtcgtcc
     6421 ttcctggcct catactcctg gccgcgcgcg ctaatgctcc agcctttgaa gtagttgagc
     6481 cgcgtctcat cgtcgaaggg gacgaactgg aaagcagcct cgcgtccttc cgggcgcagc
     6541 accttcacca ccttgcgttc gcgggtcaca atctcgccgt tgtcttttac tgtggtttcg
     6601 gtctcatgca ggagcacgac ggcattcacg tcgtcggcat acttttttgc gggttgctgc
     6661 gcggcagagc gcagccaatc cggtacgccg gccttcgcca cagaactcag cattactgcg
     6721 cacagcaaag caatgacact cttaattacc tgattgcgca ctgagggctc ctccctgcaa
     6781 cacagcctgc tgttcatctc cagcctgcac ccggctgaaa aagtccctta cttcaccgta
     6841 ttgatcaacc ttgaagaaaa ctccattcat cttgagttcc cggtgggctg cgagttcgct
     6901 gccgttgacg gatacttcat tgtgatagct tgcataaggg attccggcat ccgcgttagc
     6961 gggcgctgtt tccaatttgt aacccgcagg aattttcagc ttgaggttgt caatctctgc
     7021 atacgcgtaa gcgaagtaga caggaaattt gcgtgtaaca gcttgaaatg ctgattttct
     7081 ggatccctga aacaggctcg acggcagcag catacgtttg ccggtgattg aaccaaagct
     7141 gggcacctca acactaaacg atgccaaaag aggctcggct gagccttcgg ttccttccac
     7201 cttcaccgcc tttacggacg cgccattggg cagcagggct ttcaactcgt cttctaattg
     7261 cttattgaag ccaactgcat ccgtatcgtt agcgtcgagc cgccgttcta gcgcctcgga
     7321 gccggtgtat ttaaccagaa tgtcaccttt gagtgcgcct tcactatcca ccgcaacatt
     7381 cgcggtccgc tcgatggtcg ccttctcatt acccgctcct ggagtat
//
LOCUS       DASQYP010000191         7901 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_262406, whole genome shotgun sequence.
ACCESSION   DASQYP010000191 DASQYP010000000
VERSION     DASQYP010000191.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 7901)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7901)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7901
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_262406"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..746)
                     /locus_tag="VE783_06145"
     CDS             complement(<1..746)
                     /locus_tag="VE783_06145"
                     /inference="COORDINATES: protein motif:HMM:NF019581.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HYX53012.1"
                     /translation="MNLRRRLLLFAFTSIITSFLFSQSRPSADLIITNAKIWTVDKAH
                     PQADALAIVGERIVAVGSATDMDAWHGPQTKIIDAQGKLLLPGFNDAHVHFVDGGDHL
                     QQVQLKDAASQQEFAQRIIDRAKKTPKGEWVTGGDWDEQKWQPAALPTKELIDAQTPD
                     TPVFVNRYDGHESLANSATLRLAKIDAKTPDPPGGQIVRDPQGNPTGVLRDSAQDMVF
                     KVMPPMSPAHRMRAIHQALEHAASLGLTSV"
     gene            complement(756..1613)
                     /locus_tag="VE783_06150"
     CDS             complement(756..1613)
                     /locus_tag="VE783_06150"
                     /inference="COORDINATES: protein motif:HMM:NF039482.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(+)/NADH kinase"
                     /protein_id="HYX53013.1"
                     /translation="MKLVSIISKQGKPELERLLLETGEWLRQRGLTVTGDQVTREVLP
                     WVEPTEREQLAERNPDFVIVLGGDGTLLSTARNVARAGIPILGVNLGSLGFLTEIRQD
                     EIEKALEAITTGHCELSHRGMLHVEVEREGLCCAAYHALNEVVMNQQAVARITEFEVR
                     VDGVFVSNYKADGLIVSTPTGSTAYSLAAGGPILSPDLHGFVITPVASHALTNRPLVV
                     RDTATIEIRLIVTREQAYLTVDGQQGEPLQESDIVRCRKSEFKVKLYKLPQRSFFHVL
                     RSKLKWGER"
     gene            complement(1613..2371)
                     /locus_tag="VE783_06155"
     CDS             complement(1613..2371)
                     /locus_tag="VE783_06155"
                     /inference="COORDINATES: protein motif:HMM:TIGR00478.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0032259 - methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TlyA family RNA methyltransferase"
                     /protein_id="HYX53014.1"
                     /translation="MKTRIDKLMVQRGLVPSRERAQALLLAGRVLVNEQKVEKAGAAV
                     ESDCEIRLLGDDLRYVSRGGVKLEAALEHWRINLSGRSCLDIGTSTGGFVDCMLQHGA
                     AEVIAVDTGRGQIAAKLRSDARVRLLEDTNARHLTAEQLRNSGAEHPITFLAADVSFI
                     SVTLILPAVLAAVAELSGAAKRELVVLIKPQFEAGREAVGKGGIVRDESARQAAIARV
                     RGAVESLGGIKLEVIDSPITGAEGNREYLLHAEL"
     gene            2679..3542
                     /locus_tag="VE783_06160"
     CDS             2679..3542
                     /locus_tag="VE783_06160"
                     /inference="COORDINATES: protein motif:HMM:NF012880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016624 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors, disulfide as
                     acceptor [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /protein_id="HYX53015.1"
                     /translation="MKKPTSTAPASAAVHVSAAKTPIEASNNASPMYTERLRKLYANM
                     LRGRILLERSENVPAKLRRAQLEACEVGLGYHLSADDVVAPASRDFMLDLARGTKLTS
                     VTESLASRSRAHARTNGSSKAKPDSALTVPEGSPAQLAIATGMAASNKLQARSSITIA
                     MCPFAGKISDFPYEALHFAAENHLGIIYVLCTEWGSRLMLREAALACDVPGIIVDGKD
                     VVAVYRVAEEAVRRARQGMGPTLIDCRLELGRDPLKVMEEYLRKRSLWSPEWKQDLVS
                     SYTRDFAQLPR"
     gene            complement(3557..4696)
                     /locus_tag="VE783_06165"
     CDS             complement(3557..4696)
                     /locus_tag="VE783_06165"
                     /inference="COORDINATES: protein motif:HMM:NF013594.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M48 family metallopeptidase"
                     /protein_id="HYX53016.1"
                     /translation="MIPPSLRAVSSRTRSARLLVSTFFLAAMVITGTKCVLGQAASEP
                     GPSGPRATAELQDLAPFDDHHDVGPPADATPETAAAEHKKHAERKYDVAMIGERRVDR
                     GFNLYSIDREREMGRLMALDLEKQVRMLNDPVVNRYISNLAQRLVRHSDAKVPFVVKV
                     VDSDEVNAFALPGGFFYVNSGLILTAQNEAELAGVMAHEIAHVAARHATRNMTKVQVW
                     NVASIPLLFVAGPAGFVLRQVSGLAFPISTLKFSRDAEREADLLGLQYEYAAGYDPEA
                     FISLFERLGAKNEKRNFLAKAFATHPMNADRIRRAQKEIETMLPAKSDYVVDTSEFED
                     VRAHLFALLNSRPLLDTGEVDGPVLRRRREMDENKPADRPKLEHR"
     gene            5078..5413
                     /gene="groES"
                     /locus_tag="VE783_06170"
     CDS             5078..5413
                     /gene="groES"
                     /locus_tag="VE783_06170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013941457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="co-chaperone GroES"
                     /protein_id="HYX53017.1"
                     /translation="MAKLTPLGERVLVRRVQEAETVRGGIIIPDTAKEKPQEGVVVAV
                     GTGRYDKGGERVPMSVKEGDRVLFGKYAGSEIKIDGEEFLILKEEEIFGILTGSAKSA
                     EKPVAAGRR"
     gene            5474..7138
                     /gene="groL"
                     /locus_tag="VE783_06175"
     CDS             5474..7138
                     /gene="groL"
                     /locus_tag="VE783_06175"
                     /inference="COORDINATES: protein motif:HMM:NF009488.0"
                     /note="60 kDa chaperone family; promotes refolding of
                     misfolded polypeptides especially under stressful
                     conditions; forms two stacked rings of heptamers to form a
                     barrel-shaped 14mer; ends can be capped by GroES;
                     misfolded proteins enter the barrel where they are
                     refolded when GroES binds; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chaperonin GroEL"
                     /protein_id="HYX53018.1"
                     /translation="MPKVIVHGEESRQAILRGVNVLADAVKVTLGPKGRNVVINKKFG
                     SPVITKDGVTVAKEIELGDTLENMGAQMVREVASKTSDVAGDGTTTATVLAQAIYRDG
                     VKTVAAGANPMALKRGIEKAVSHICGALDKEGNRAKGFLDSLSKPVVGDATIAQVGTI
                     SANNDDTIGKIIAEAMKKVGKDGVITVEESRTMETMLEVVEGMQFDRGYLSPYFVTDP
                     ERMEASLDDAYILINEKKISSMKDLLPILEQVAKQGRPLVIIAEDVDGEALATLVVNK
                     LRGTLQVCAVKAPGFGDRRKAMLQDIAILTGGKAITEDLGLKLEGVQITDLGRAKKVT
                     IDKDNTTIVEGKGKGSEIEGRVKEIRGQMDNTTSDYDREKLQERLAKLVGGVAVIKVG
                     AATETEMKEKKARVEDAMHATRAAVEEGIVPGGGVALVRCAAALTELKLKSEDEQIGV
                     DIVRRACEEPLRQIVGNAGEEGAIVVGKIRESKDNNFGYNAQTGKFEDLVKAGVIDPT
                     KVTRTALQNAASIAALMLTTEALVSDLPEDKKANAGGGDHGMPYGG"
     gene            7298..7861
                     /locus_tag="VE783_06180"
     CDS             7298..7861
                     /locus_tag="VE783_06180"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53019.1"
                     /translation="MRIFIIPVALLSVMFALPGLPSRTPEAIHTRLMNSPDVPDWKQF
                     LYEEDGFAISAPTEPGSRRGSATVGPGEVEQHFYSVSLGDDSGWMAIAYTLDPDDKRS
                     PEIILADKRDSALESVHGKLISEMPIVLEGYLGLQVELESEKYRARSRYYVVGRRMYE
                     LLSIAPMDRPIHRETDRFFRGFRLIVR"
BASE COUNT         1671 a         2372 c         2269 g         1589 t
ORIGIN      
        1 tggacgctgg tgaggcccag tgaagccgcg tgctccagcg cctgatggat ggcccgcatg
       61 cgatgcgccg gactcatggg cggcatgact ttgaagacca tgtcctgggc tgaatcacgc
      121 agcacgccgg tgggattgcc ctgagggtcg cggacgatct ggccgccggg agggtcggga
      181 gttttggcgt cgattttggc cagtcgcaaa gtcgcagaat tggccagcga ctcatggccg
      241 tcatagcggt tgacgaagac gggcgtgtct ggcgtctgcg cgtcgatgag ttctttggtg
      301 gggagagcgg cgggctgcca cttctgctcg tcccagtcgc cgccggtgac ccactcgcct
      361 ttgggagttt tcttcgcgcg gtcaatgatc cgctgcgcga actcctgttg tgaggcggcg
      421 tctttgagct ggacttgttg caggtggtcg ccgccgtcga cgaagtgcac gtgagcgtcg
      481 ttgaagccgg gcagcagcag cttgccctgc gcgtcaatga tcttggtctg cgggccgtgc
      541 catgcgtcca tgtcagtggc ggaacccacg gcgacgatgc gctcacccac gatggccagc
      601 gcgtcggcct gcggatgggc cttgtcgacg gtccagattt ttgcgttggt gatgatcagg
      661 tcagccgagg gccggctctg cgaaaacaga aacgaggtga tgattgaagt gaacgcgaaa
      721 agcaacagcc ggcgacgaag attcattgga gcgggttacc tctcacccca tttcagtttg
      781 ctgcgcagca catggaagaa agaccgctgc ggcagcttgt acagcttgac cttgaactct
      841 gatttccggc agcgcacgat gtcgctttcc tgcagcggct cgccctgctg gccgtccacg
      901 gtgagatatg cctgctcgcg cgtgacgatc agccgaattt cgatggtcgc cgtatcgcgc
      961 accaccagcg gccggttcgt aagcgcgtgc gatgccactg gagtgatcac aaagccgtgg
     1021 aggtcaggag aaagaatggg cccgccggcc gccagcgagt aagcagtgga accggtgggc
     1081 gtggagacga tcaggccgtc ggctttgtaa ttggagacga aaacaccatc aacgcgaact
     1141 tcaaattcgg taatgcgcgc caccgcctgc tggttcatca ccacttcatt cagtgcgtga
     1201 tacgcggcgc agcacagccc ttcgcgctcc acctcaacgt gcagcatgcc gcgatggctc
     1261 aactcgcaat gcccggtggt gatggcttcc agcgctttct caatctcgtc ctggcggatt
     1321 tcggtgagaa atcccagcga gcccaggttc acgccgagga ttgggatacc ggcgcgggcc
     1381 acgttgcggg ccgtggaaag cagtgtgccg tcgccgccca ggacgattac gaagtcggga
     1441 tttctctccg caagctgctc gcgctcggtg ggctcgaccc agggcaaaac ttcgcgcgtg
     1501 acctggtcgc cggttacggt gagcccgcgt tgccgcagcc actcgcccgt ttccagcaaa
     1561 aggcgctcca gctccggctt gccctgtttg gagatgatcg agaccagctt catcagagtt
     1621 ccgcgtgcaa cagatactcc cggttccctt ccgcaccggt gatcggtgaa tcgatcacct
     1681 caagtttaat gcctcccagc gattcaaccg cgccgcggac ccgcgcaatc gccgcctgcc
     1741 gcgcgctttc gtcgcgcaca atgccgcctt tgcccacggc ttccctgccc gcctcaaact
     1801 gtggcttgat cagcaccacc agctcgcgct tggccgctcc gctcagctcc gccactgccg
     1861 ccagcaccgc cgggagaatg agtgtaacag agataaaaga gacatccgct gccaggaacg
     1921 tgataggatg ctccgcgcct gaattacgca actgctccgc ggtgagatgc cgcgcattag
     1981 tgtcttccag cagccggact cgagcatcgc tgcgcagctt agccgcgatc tgccctcgtc
     2041 ctgtatccac cgcgatcact tctgccgcgc cgtgctgcag catgcaatcg acaaacccgc
     2101 cggttgacgt gccgatatca agacagctgc ggccgctcag gttgatgcgc caatgttcaa
     2161 gcgccgcttc cagcttcacg ccgccgcggc tcacgtatcg caggtcgtca ccgagcaggc
     2221 ggatttcgca gtcgctctcc accgccgcgc cggccttctc aactttctgc tcgttcacca
     2281 gcacgcgtcc ggcaagcaac agcgcctgcg cgcgctcgcg cgaaggaacc aatccgcgct
     2341 gcaccatcaa tttgtcgata cgagtcttca tcgcatggga ggtgtgatct gcatcacagc
     2401 gcgtagccga gtctctgtgg gagaaaaatt tatcatccat tcacaattcg cacctgcgga
     2461 tgtgcaaagg gctgaaacgg gcattttgcg ctggttactg aagtaacatt gggagttttc
     2521 cacatcgttt ttcactactc tgttgaaaac gcggcgcact gcatggaacc aaagttgctc
     2581 catgacgtga gtcgcgataa ttgtgaataa ttcctaacct cacccgcttg cacacatcgt
     2641 gtcagctcgc ttgcgtttac aatgattcac ctgtcgtgat gaaaaagcca acctcaacag
     2701 cgcctgcaag tgcggcggtg catgtgtcgg cggcaaaaac gccgattgaa gccagcaaca
     2761 atgcctctcc catgtacacc gagcggctcc ggaagttata cgcgaacatg ctgcgcggcc
     2821 gcattctcct ggaacgcagc gagaatgttc cggcaaagct gcggcgcgct caactggagg
     2881 cctgcgaagt tggactggga tatcacttga gcgcagatga cgtggttgca cccgcgtccc
     2941 gcgactttat gcttgatctt gcccgcggca cgaagctgac gagcgttaca gaatcgctgg
     3001 cctcgcgctc cagagcgcac gcccgcacaa acggaagctc caaagccaaa cctgattccg
     3061 cgctcactgt gccggaaggc tctcctgccc aactcgctat cgctaccggg atggccgcca
     3121 gcaacaaact tcaggcgcgc tcctccatca ctatagcgat gtgtccgttt gccggaaaaa
     3181 tttccgattt tccttacgaa gctcttcact tcgccgccga aaatcatctc ggcatcatct
     3241 acgtgctctg taccgaatgg ggttcgcgcc tcatgctgcg cgaagccgcg cttgcctgcg
     3301 acgtgccggg gataatcgtc gacggcaagg atgtcgtcgc cgtatatcgg gtggcggaag
     3361 aggctgtgcg ccgcgcccgc caggggatgg gtccaacttt gattgactgc cgtctggagc
     3421 tcggccgtga tccccttaaa gtaatggaag aatatctgcg caagcgaagc ctctggtcgc
     3481 ctgagtggaa gcaggatctg gtcagcagct atacccgtga tttcgcgcag cttccccggt
     3541 aaccgggctg cgattcctac ctgtgctcca gcttgggccg gtctgccggt ttattctcgt
     3601 ccatctccct gcgtctccgc agcaccggcc cgtctacttc gccggtgtcc aggagcggcc
     3661 tggaattgag caatgcaaac agatgcgcac gcacgtcctc gaattcgctg gtgtccacca
     3721 cataatcgga ctttgccggc agcatggttt caatttcctt ctgcgcgcgt cgaatccggt
     3781 cagcattcat ggggtgggta gcaaacgcct tggccagaaa attcctcttc tcgttcttgg
     3841 ctccaagccg ctcaaacaaa ctgatgaaag cctcgggatc ataaccggca gcatattcat
     3901 attgcaggcc cagcaggtcg gcttcacgct ccgcgtcgcg gctgaacttt agcgtgctta
     3961 tcggaaaggc caggcctgac acctgacgca gcacaaatcc cgcgggacct gccacgaaca
     4021 gcaacggaat tgacgccacg ttccacacct gcaccttcgt catgttccgc gtggcgtgcc
     4081 gtgcggcaac gtgggcaatc tcgtgggcca ttacgccggc cagctccgct tcattctggg
     4141 ccgtaaggat caatccgctg ttcacataga aaaaaccacc tggcagcgcg aaggcattca
     4201 cctcgtcgct gtccaccacc ttcaccacaa acggaacctt cgcgtcggag tggcgcacca
     4261 gccgctgcgc caggttgctg atatagcgat tcaccaccgg atcattgagc atcctgacct
     4321 gcttttccag gtctagggcc attaaccgcc ccatctcgcg ttcgcgatca atagagtaaa
     4381 gattgaatcc gcggtcgact cgacgttccc cgatcatggc aacgtcatac ttccgctctg
     4441 cgtgcttctt gtgctctgcc gccgctgttt ccggcgttgc gtccgctggc ggcccgacat
     4501 cgtgatgatc atcaaacgga gctagatcct gtagttctgc tgttgctctg gggccgctcg
     4561 gaccgggctc actggctgcc tggcccagca cacacttcgt gccggtgata accattgctg
     4621 caagaaagaa ggtggaaaca agcaggcgcg cagaacgagt gcggctgctt acggcgcgca
     4681 gagagggggg aatcatggac tctccgatac aagcgcccaa ctactgtgct ggagggcact
     4741 ttgagatggt tagagatacc acgtaagctg aaggttggag caggaaaatt tcctgcgcca
     4801 acttgcgccc tctatccgtg agctgttgtt taaccaacca tcacctaagt cactgattct
     4861 gcagcgacgg tcgtcatgcc agacgacgtc acgacccctt gattcggaat cttagtatta
     4921 gacactcaca tttctgcagc tcccctgttg acaaacgggc tggaagtttc ttatgattag
     4981 cactcgatgg gatagagtgc tagcagcaac tcccgtcaga gtcttcaaaa gcagttctta
     5041 agcagtcaat ccaaatactt ttcaaggagt tgtaccaatg gcaaagctga ctccactggg
     5101 tgagcgcgtt ctggtccgcc gggtccagga agccgagacc gttcgtggcg gcatcatcat
     5161 tccggacacc gctaaagaga agccccagga gggcgttgtg gtagccgtgg gcactggccg
     5221 ttatgacaaa ggcggcgagc gcgttcccat gagcgtgaaa gaaggcgatc gcgtcctgtt
     5281 cggcaagtat gccggatcgg aaatcaaaat tgatggcgaa gagttcctca tcctgaagga
     5341 agaggagatc ttcggaatcc ttactggcag cgcaaagagc gctgagaagc cggttgctgc
     5401 cggccgccgg tagagttgtt caggtttcac caacgcgcta acgcgcgaca agatctgata
     5461 ggagaattga gaaatgccta aagtaattgt gcacggtgaa gagtcgcgcc aggctattct
     5521 gcgtggtgtc aacgtcctgg ccgatgcagt aaaggtaacg ctgggcccca agggccgcaa
     5581 cgtcgtaatc aacaagaagt tcggttcgcc ggtcatcacc aaagacggcg tgaccgtggc
     5641 aaaagaaatc gaactcggtg acaccctgga aaacatgggc gcccagatgg tgcgtgaagt
     5701 cgccagcaag accagcgacg ttgccggtga cggcaccacc accgctaccg ttctggctca
     5761 ggccatctat cgcgatggtg tgaagaccgt tgccgccggc gccaatccca tggccctgaa
     5821 gcgcggcatc gagaaggccg tatcccacat ctgcggcgcg ctcgataagg aaggaaaccg
     5881 cgcgaaaggt ttcctggata gcctctccaa gcctgtcgtc ggcgacgcaa ctatcgctca
     5941 ggtaggcacc atctccgcca acaatgacga tacgatcggc aagatcattg ctgaagccat
     6001 gaagaaggtc ggcaaggacg gcgtgatcac cgtggaagag tcccgcacca tggagaccat
     6061 gctcgaagtg gtggaaggca tgcagtttga ccgcggctat ctctccccat acttcgtcac
     6121 tgaccccgag cgcatggaag ccagcctgga tgacgcttac atcctcatca acgaaaagaa
     6181 aatcagcagc atgaaggacc ttctccccat cctcgagcag gtggcgaagc agggccgtcc
     6241 gctggtgatc atcgcggaag atgttgacgg tgaagcgctg gccaccttgg tggtcaacaa
     6301 gctgcgcggt acgctgcagg tttgcgccgt aaaggcgcct ggctttggcg atcgccgcaa
     6361 ggccatgctg caggacatcg ccatcctcac cggcggcaag gcaatcactg aagatctcgg
     6421 cctgaagctg gaaggcgttc agatcactga ccttggccgc gccaagaaag tcacgatcga
     6481 caaggacaac accacgatcg tcgaaggcaa aggcaagggc tcggagatcg aaggtcgcgt
     6541 aaaagaaatc cgtggccaga tggacaacac caccagcgac tatgaccgcg agaagctcca
     6601 ggagcgtctg gcgaagttgg ttggtggcgt tgccgtaatc aaagtcggcg ccgcaaccga
     6661 aaccgaaatg aaggaaaaga aagcccgcgt ggaagatgct atgcatgcga cccgcgctgc
     6721 cgtggaagaa ggcattgtcc ccggcggtgg cgtggctctg gtgcgctgcg cggctgctct
     6781 caccgagctc aagctgaaga gcgaagatga gcagatcggt gtggacatcg tccgtcgcgc
     6841 ctgtgaagag ccgctgcgcc agatcgttgg caacgccggc gaagaaggcg caatcgtggt
     6901 gggcaagatc cgcgaatcga aggacaacaa cttcggctac aacgcccaga ccggcaagtt
     6961 cgaagacctg gtcaaagctg gcgtgatcga cccaaccaag gtgacccgca ccgcgctgca
     7021 gaacgctgct tctatcgccg cgctgatgct gaccaccgaa gccctggttt ctgacctgcc
     7081 ggaagacaag aaagccaacg ccggcggcgg cgaccacggc atgccttacg gcggataaca
     7141 aaagcccatt agctgctcca ctaagaagcc cttatcgcaa gatgagggct ttttcatttc
     7201 tggaaatccc ccccaaaagc tgcggcaccc ccgtaacctg tgcgccattt cgggcgctct
     7261 ctatcatcaa tgatcgagct cctttcgcgg cttcgctatg cgcatcttca tcatccccgt
     7321 tgcactactc tcggtgatgt tcgcccttcc cggtcttccc tcccgaacgc cagaggcaat
     7381 ccacacacgg ctgatgaact cgcctgacgt tccggactgg aaacaatttt tatatgaaga
     7441 ggatgggttc gcgatatcag ccccaaccga accgggctct cgccgcggca gcgcgaccgt
     7501 cggcccgggt gaagtggaac agcactttta cagcgtctcc ctcggagacg acagcggctg
     7561 gatggccatc gcctacacgc tcgatccgga cgacaaacgc tctcctgaaa tcatcctcgc
     7621 cgacaagcga gacagtgctc ttgaatcggt tcatggcaaa ttgatctcag aaatgccaat
     7681 tgtgcttgag ggctatcttg gcttgcaggt ggaacttgag tcagaaaagt atcgtgcgcg
     7741 cagccgttac tacgttgttg gccgccgcat gtacgaactg ttgtcgatcg cccctatgga
     7801 cagacctatt catcgcgaga ctgatagatt ctttcgcggg tttcgactga ttgtgcgcta
     7861 aggccggact ctgcaccttg aagcgcggcg cttacctaca a
//
LOCUS       DASQYP010000192         5564 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_113833, whole genome shotgun sequence.
ACCESSION   DASQYP010000192 DASQYP010000000
VERSION     DASQYP010000192.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 5564)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5564)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5564
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_113833"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..917)
                     /locus_tag="VE783_06185"
     CDS             complement(<1..917)
                     /locus_tag="VE783_06185"
                     /inference="COORDINATES: protein motif:HMM:NF005495.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HYX53020.1"
                     /translation="MADRISFLMGNKKKEVVVVTGASAGVGRAVVREFAAHGADVAML
                     ARGKERLEAARREVEHLGCRALAIPCDVADAAAVEAAAEQVERELGSIDVWVNNAMVS
                     VFSPIRDMKPEEYRRVTEVTYLGVVHGTLAALKRMLPRNRGTIVQVGSALAYRSIPLQ
                     SAYCAAKHAIVGFTDSLRCELIHDKNNVHVTVAHLPAMNTPQFEWSRSRMPRHPQPVP
                     PIYEPEVAARGIYFAAHARRRELWVGFPTVVAINGQKIAPGFADHYLGEQGYDSQMTS
                     EPVAPNRADNLFEPAPGEWAAHGTFTKQSR"
     gene            1043..1432
                     /locus_tag="VE783_06190"
     CDS             1043..1432
                     /locus_tag="VE783_06190"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53021.1"
                     /translation="MKTATEVLALLRGEIKAGVEHEFDKDPIGNVRLRQLLIMEDCLN
                     AIGFPSEAEHKARVSLVPYLFQEANYDDISWTDQQADLGHLSSYFELDCMVQNQGRAR
                     REISADEFTRYVNDCLGFIDKAQAESQ"
     gene            complement(1812..2444)
                     /locus_tag="VE783_06195"
     CDS             complement(1812..2444)
                     /locus_tag="VE783_06195"
                     /inference="COORDINATES: protein motif:HMM:NF024273.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DinB family protein"
                     /protein_id="HYX53022.1"
                     /translation="MKLVRTISLLAVLSVAMITLSLAQGGAAPAKPATPAGQGASQPA
                     QPAPTVSNIVDRQISLIEKEFVEAAEAMPEDKFNFTPENLKLQGADYNGVRTFALEVR
                     HVATANYAFWSPLAGEQLPAGIKGPNGPEDLKTKADIVKYLKDSFALGHKAVANLSAQ
                     NATETVRTFQGTQPRLFLATFPVAHAFDHYGQMVEYLRMNGITPPASRQQ"
     gene            complement(2519..3124)
                     /locus_tag="VE783_06200"
     CDS             complement(2519..3124)
                     /locus_tag="VE783_06200"
                     /inference="COORDINATES: protein motif:HMM:NF024273.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DinB family protein"
                     /protein_id="HYX53023.1"
                     /translation="MKTLNALFLVLCLAPICLFAQNASAPKSQPQQAPSFSGIVERKI
                     SNLEKEFVEAAEAMPDDKFNFTPDSLGLKGSEYKGVKTFAEEVRHVAATNFALWGAVA
                     GEKPPMDLGGDNGPESLKTKAEIVKFLKDSFALGHRAAKSLTNDNVLGTVQSPFGPQQ
                     VPRIHLATFAVEHAFDHYGQMVEYLRMNGIIPPASRPQPQK"
     gene            complement(3158..4435)
                     /locus_tag="VE783_06205"
     CDS             complement(3158..4435)
                     /locus_tag="VE783_06205"
                     /inference="COORDINATES: protein motif:HMM:NF017760.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HYX53024.1"
                     /translation="MSLAAQPRPFHNVENSAQIEIAPEPVHGGALAPLREPLFRSLWI
                     AAVISYTGSWMQNIATGWLMTSLTSSPMWVSLVQVALSLPVLIIALPAGALADLVDRR
                     KFLLITQSSMVAASMALGILTITGTCTPTLLLILTFLLGAGAVMNDPAWQALTPDLVP
                     VSKLAAAVALNSAGFNIARAVGPALGGLVVATAGSGAAFLLNAISFFGVILFLYRWKP
                     APKETSLLKQTVTGAIGIGLRYTREEPRIKAVLVRTFAFSICSSAFWALLPLIASRFG
                     AEGYGAMLALFGLGALVGALLLARARRSFSYDAVTASATVVFAVALFGLVHTDGLIAS
                     SVFAAAAGLAWISMLATLNLVAQIVCPGWIRARVISMYVLVLQGGLAVGSVLWGAVAT
                     HTSIRFTFTVAAALLVAGLGATPVFRLQSSRNH"
     gene            complement(4442..>5564)
                     /locus_tag="VE783_06210"
     CDS             complement(4442..>5564)
                     /locus_tag="VE783_06210"
                     /inference="COORDINATES: protein motif:HMM:NF024910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="APC family permease"
                     /protein_id="HYX53025.1"
                     /translation="VYVWPSLGHVLLDRTFHFAWLGGLELRLLITSSTFVAMLVCLLA
                     MFLLYRRIGVVGSVARYLSAGVLGAIALVTIAGLTHFKASQAFTFPAHAFDGFNGAQD
                     LLGFLTGLGSAMLVATYDYWGYYNVGFLGSEIQKPEKNIPRAIIYSILLVGVLYIVMN
                     ISILGVVPWQELDQAAATESRFYVASLVLQRTFGHWVATFGTFLIMWTAFASVFSLML
                     GYSRVPYAAAVDGNYFRSYSSIHPKHRIPHVSLLTLGGVATLFCILRLADLIAALVVI
                     RIMVQFLSQILGLLLLRKQRPEFPRPFRMWLYPIPALLAAAGFLFVLFMRPGFLREIR
                     FASVIIVLGLLIYFVRSWRRREWPFSGASAHEIAGAGVQ"
BASE COUNT         1266 a         1609 c         1673 g         1016 t
ORIGIN      
        1 cgcgactgtt tcgtgaatgt gccatgagcc gcccattcgc caggagcagg ctcaaataga
       61 ttgtccgccc gatttggggc gacgggttca ctggtcatct gcgagtcata gccctgctcg
      121 cccagatagt gatcggcaaa gccgggagcg atcttctgtc cgttgatcgc cactaccgtt
      181 gggaagccaa cccacagttc gcggcgacga gcgtgcgcgg caaagtaaat tccgcgggcg
      241 gccacttcag gttcgtagat cggaggcacc ggctgcggat ggcgtggcat gcgcgaacgc
      301 gaccactcaa actgcggcgt attcattgcc ggcaggtgag cgaccgtgac gtgaacgttg
      361 ttcttgtcat ggatcagctc acatcggaga gaatcggtga atcccacaat tgcgtgcttg
      421 gccgcgcaat atgccgactg cagcgggata ctgcggtacg ccagcgctga acccacctgc
      481 acgatcgtcc cgcggttgcg cggcaacata cgcttcaaag ccgccagcgt cccgtgcacc
      541 acgccgaggt aggtaacctc cgtgacacgc cgatactctt ccggcttcat gtccctgatg
      601 ggcgagaaga ccgaaaccat ggcattgttc acccagacgt cgatggaccc cagctcgcgt
      661 tccacctgct ctgccgcagc ttccacggca gctgcatcgg ccacatcgca agggatggcc
      721 agggcgcgac agcccaggtg ctccacttcc cttcgggcgg cctcaagacg ctcttttcct
      781 cgggcgagca tggcaacgtc agcaccatgt gcggcaaact cgcgcaccac ggcacggccc
      841 acgccggcag aagcgccggt aaccactaca acttcttttt tcttgttccc cataaggaat
      901 gagattcggt cagccatggc aagcgttggc aggaggcgca agctgccgcg aacagaacct
      961 atgtggcagg ccagggttcc gccagggtga atgcggatgc gagcacgccg gatgagacgg
     1021 ccctaaagta aaatcctgca cgatgaaaac tgcaactgag gtgctggccc tgctgcgagg
     1081 cgaaatcaaa gcgggcgtgg aacacgagtt cgacaaggac ccaatcggca acgtccgact
     1141 gcgccaactc ctaatcatgg aggattgcct caatgccatc ggattcccca gcgaggccga
     1201 gcacaaagcg cgggtctcac tggtgccgta tctttttcag gaagccaact atgatgacat
     1261 ctcctggaca gaccagcagg ccgacctggg ccacctgagc tcctattttg agcttgactg
     1321 catggtgcag aaccaggggc gcgcccgcag agaaatctcc gcagatgaat ttactcgtta
     1381 cgtaaatgac tgcttggggt tcatcgacaa ggcccaggcg gaaagccaat gaactcggcc
     1441 cagtaaggtt tggggcgcaa agtataaacc ccgcagcaac gctgcggggt ttatcggtag
     1501 tctgttggga ttggctgaag gcgcggaggc ctttgcgaaa acaattccaa ctcgctagga
     1561 cttaaagact cacgccttaa gcctcagcca cctcacgttt atcactacaa tcagaacttt
     1621 tcatctattg gatcgccctc ctttcccgtg taaggtgagt ttagcggcac ttaactgata
     1681 agtcaatacg aaaagtgaaa ggcatcgttt acgcctatca gtgaaaaagg gcactgatgc
     1741 ggcacgaagg gcggaaattc cgctctgctc cgtgttgctc agtgcccatt gtttggtaag
     1801 gcgccttagt actactgctg gcggctcgcc ggaggcgtga taccgttcat gcgcaggtac
     1861 tccaccatct gtccgtaatg atcaaacgca tgcgccaccg ggaaggttgc caggaagagg
     1921 cgtggctgcg tcccctgaaa cgtccggacg gtctcggttg cattctgcgc actcaggttg
     1981 gctactgctt tgtgccccag cgcgaatgag tctttcaggt acttgacgat atcggctttg
     2041 gtcttcaggt cttccggacc gttcggcccc ttgatgccgg cgggcaactg ctctcccgcc
     2101 agcggcgacc agaatgcata attcgctgtg gccacatgcc gcacctcgag cgcgaaggtg
     2161 cgtacgccgt tatagtcggc gccctgcagt ttcagatttt cgggcgtgaa gttgaatttg
     2221 tcttccggca tggcttccgc tgcttcgaca aattcctttt caatcaggct gatctgacga
     2281 tcaacaatgt tggaaacggt cggcgcgggc tgcgccggct gcgatgcgcc ctggccagcc
     2341 ggcgtggcag gctttgcagg ggcggctccg ccctgcgcca ggctcagggt aatcatggcg
     2401 acgctcagga ccgccagcag cgatatggtt ctcaccagct tcatgcaact ctcctttggt
     2461 tcaatggcag gttttcgatt cccggaagca ctcaacgatg cacattattt gtgggacttt
     2521 atttttgtgg ttggggacgg cttgccggag gaatgatccc gttcatgcgg aggtattcca
     2581 ccatctgccc gtaatggtcg aacgcgtgct caacagcgaa cgtcgccagg tggatgcgcg
     2641 ggacctgctg cggtccgaac ggtgactgaa cggttcctag aacgttgtcg ttggtcagcg
     2701 actttgccgc acgatggccg agagcaaaag agtccttcag gaactttacg atttcggctt
     2761 tggtcttgag cgattctgga ccgttgtcgc cgcccaggtc cattgggggc ttttcaccag
     2821 caacagcgcc ccagagtgcg aagttcgtcg cggctacatg acgaacttcc tcggcgaagg
     2881 tcttcacgcc cttgtactcg ctgcccttca ggccgagcga gtccggggtg aagttgaact
     2941 tgtcatcggg catggcttcc gccgcttcca caaattcctt ttcgaggttg ctgatcttcc
     3001 gctccactat tccggaaaag ctgggagcct gctgcggctg ggatttgggc gccgaggcat
     3061 tttgagcgaa caggcaaatg ggagcaaggc acagcactag aaacaacgcg ttcagggttt
     3121 tcatgttgtt ctctctccta agggtcgagt cagagtatca atgattccgg gatgattgca
     3181 gacgaaacac aggagtggcg ccaagtccgg caacaagcaa agccgccgcc acagtaaagg
     3241 taaacctgat gctggtgtgc gtggccaccg ccccccagag aacgctgcca acggcaaggc
     3301 cgccctggag aaccaggaca tacatggaga ttacccgggc gcggatccag ccgggacaga
     3361 cgatctgtgc gaccaggttc aatgtggcaa gcatgctgat ccaggccaga ccggccgcag
     3421 ccgcgaagac tgacgatgca atcagcccgt ccgtgtgtac caggccgaac agcgcaacgg
     3481 cgaagacgac ggtagccgat gcagttacgg cgtcataaga gaagctgcgc cgcgcccgcg
     3541 ccagcaataa cgcaccgacg agcgccccga gtccgaagag ggccagcatg gcgccatagc
     3601 cttccgcgcc aaagcggctg gcgatcagag gcagcaatgc ccagaacgca cttgagcaga
     3661 tggaaaaagc aaaggtgcgc accagcaccg ctttgattcg gggctcttca cgcgtgtagc
     3721 gcaagccaat tccgatggcg ccggtgaccg tctgctttaa gaggctggtt tccttaggcg
     3781 ccggtttcca gcgatacaaa aacaggatca cgccaaagaa agagatcgcg ttcagaagga
     3841 aagcggctcc tgatccggcg gtggcgacga ctaaaccgcc cagcgcagga cctaccgcac
     3901 gcgcgatgtt aaagcctgct gaattcagcg ccaccgcggc ggccagcttg ctcacgggaa
     3961 ccagatccgg cgtgagcgcc tgccatgcag gatcgttcat gactgctccg gcacccagca
     4021 ggaaggtaag gatcagcagc agagtcggcg tgcacgtgcc ggtaatcgtg aggatgccca
     4081 gggccatgga agccgccacc atggagctct gcgtgatgag cagaaacttg cgccggtcca
     4141 ccaggtcggc gagggctccc gcaggcagcg cgatgatcag cacaggaaga ctcaaggcca
     4201 cctgaaccag cgaaacccac atgggcgacg aggtgagcga cgtcatcaac cagccggtgg
     4261 cgatattctg catccagctg ccggtatagg aaattaccgc agctatccac aagctgcgga
     4321 aaagcggctc acgcagtgga gccagcgcgc cgccgtgaac gggctccgga gcgatctcta
     4381 tctgggcgga gttttccacg ttatggaagg gcctcggctg ggcggcgagc gacatggcag
     4441 atcattggac tcccgctcct gcaatctcgt gagcagacgc gccggaaaac ggccattcgc
     4501 ggcgtcgcca cgagcgaacg aagtaaatga gcagacctaa cacaatgatg accgaggcga
     4561 accgaatttc gcgcaaaaat cccggacgca tgaacaaaac aaataagaag ccggctgcag
     4621 ccagcagcgc cggaatggga taaagccaca tgcgaaacgg acgcgggaac tcaggacgtt
     4681 gttttcgcag cagcagcaag ccaagaatct gagagagaaa ctgcaccatg atgcggataa
     4741 cgacgagcgc cgcgatgagg tcggccaagc gcagaatgca gaacagcgtg gccacaccgc
     4801 ccagcgtcag caatgagacg tgcggaattc ggtgcttcgg atggatgctc gagtagctgc
     4861 gaaagtagtt gccgtccacg gcagcagcat agggcacgcg cgaatatccc aacatgagcg
     4921 aaaacaccga ggcgaaggcg gtccacataa tgaggaaggt gccaaaggtc gccacccagt
     4981 ggccgaaggt gcgctgcagc acgagcgagg cgacgtaaaa gcgcgactcg gtggcggcgg
     5041 cctggtccag ttcctgccac ggcaccacgc ccaggatgct gatgttcatg acgatgtaga
     5101 gaacgccgac cagcagaatg gaatagatga tggcgcgggg gatattcttt tccggcttct
     5161 gtatctccga gccgagaaaa cctacgttgt aataacccca atagtcgtaa gtcgccacca
     5221 gcatggcgga accaaggcca gtgaggaagc caagcaggtc ctgcgcgcca ttgaagccgt
     5281 caaaggcgtg cgcggggaag gtgaacgcct ggctggcttt gaaatgagtg aggccggcaa
     5341 tcgtgaccag cgcaatcgcg ccgagcacgc ccgcggacag ataacgcgcc acactgccca
     5401 ccacgccgat tcggcggtaa agcaggaaca tcgccaagag gcagacaagc atggcgacga
     5461 atgttgatga ggtgatgagc aggcgcagct cgagcccgcc gagccaggcg aaatgaaatg
     5521 ttcggtcgag cagaacgtgg ccgagcgatg gccagacgta gacc
//
LOCUS       DASQYP010000193         6310 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_240068, whole genome shotgun sequence.
ACCESSION   DASQYP010000193 DASQYP010000000
VERSION     DASQYP010000193.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 6310)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6310)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6310
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_240068"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..674
                     /gene="tsaB"
                     /locus_tag="VE783_06215"
     CDS             <1..674
                     /gene="tsaB"
                     /locus_tag="VE783_06215"
                     /EC_number="2.3.1.234"
                     /inference="COORDINATES: protein motif:HMM:TIGR03725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003725 - double-stranded RNA binding
                     [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     dimerization subunit type 1 TsaB"
                     /protein_id="HYX53026.1"
                     /translation="IDTSGKSGGVTLAEGDAHSFRVLGSSAISGGTFSAQLVPTVAAL
                     LEERKLTVHDVNGLCVASGPGSFTGLRVGLSAVKGLAEVLHIPIAAVSLLAALASRSH
                     AKGTVLAALDAGRGEFFVGTYFKDADTNSQRCVDESLRTRAELLAQIQASPSPALITC
                     DESVAQAASETGISLETVSRPDSALIAQLGLERLLAGDTVAIEALDANYLRRSDAEIF
                     FKGTR"
     gene            675..1133
                     /gene="rimI"
                     /locus_tag="VE783_06220"
     CDS             675..1133
                     /gene="rimI"
                     /locus_tag="VE783_06220"
                     /EC_number="2.3.1.266"
                     /inference="COORDINATES: protein motif:HMM:NF024812.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008999 -
                     peptide-alanine-alpha-N-acetyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA];
                     GO_process: GO:0042254 - ribosome biogenesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosomal protein S18-alanine
                     N-acetyltransferase"
                     /protein_id="HYX53027.1"
                     /translation="MVQIRQAVRVDLIHILELAAREPSSALWPAEKYDNYFAQKTEQK
                     WQLLLASEGGTVIGFIAARSLHDECEIENIVVSRSMQRRGVASELLKHLFSTLSDRIE
                     RVFLEVRESNQPAIRLYEKAGFMEVGRRKSYYREPPEDALIMKKSFGKLA"
     gene            1197..1427
                     /locus_tag="VE783_06225"
     CDS             1197..1427
                     /locus_tag="VE783_06225"
                     /inference="COORDINATES: protein motif:HMM:NF016231.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF465 domain-containing protein"
                     /protein_id="HYX53028.1"
                     /translation="MVDSVREQLLASHDEFRRLAQEHTQYSQRLESLLDKRYLSDDEK
                     LEEVRLKKLKLRLKDQMFTIEQEFRTGRTQVA"
     gene            1599..2264
                     /locus_tag="VE783_06230"
     CDS             1599..2264
                     /locus_tag="VE783_06230"
                     /EC_number="4.1.1.65"
                     /inference="COORDINATES: protein motif:HMM:NF003678.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004609 - phosphatidylserine decarboxylase
                     activity [Evidence IEA];
                     GO_process: GO:0008654 - phospholipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidylserine decarboxylase family protein"
                     /protein_id="HYX53029.1"
                     /translation="MVRDGLYYAAGMLVVAAVLWWLAAPAAAVVPILFALFFLWFFRD
                     PERTISQEPGLIVSPADGKVTEVASTQFKGQPYTRISIFLNVFNVHVNRSPISGVIRE
                     VVYQRGKFGNAMAETSANANEQNIVTVEGEGMTIVFKQIAGLLARRIVFNGKPGDTLA
                     RGQRVGMIKFGSRTDVIFPEPNQVSVKVGDNVKGGSSILARVGKRQDLKPSPAPQTTE
                     ATR"
     gene            2261..3151
                     /gene="pssA"
                     /locus_tag="VE783_06235"
     CDS             2261..3151
                     /gene="pssA"
                     /locus_tag="VE783_06235"
                     /EC_number="2.7.8.8"
                     /inference="COORDINATES: protein motif:HMM:TIGR00473.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003882 - CDP-diacylglycerol-serine
                     O-phosphatidyltransferase activity [Evidence IEA];
                     GO_process: GO:0008654 - phospholipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-diacylglycerol--serine
                     O-phosphatidyltransferase"
                     /protein_id="HYX53030.1"
                     /translation="MKIPAPMRRWEDQLPAEQRRRMRKGMYILPSFFTAANIGAGYYA
                     IAEAIRAAQASSVHFDRAALAIGIAIVADGLDGRIARMTNTTSDFGREFDSLADVITF
                     GVAPAILAFLWGFHWLWEYDFESTAVLARVAQLGLVASFIYLVAGASRLARFNIQANP
                     QPSNPGRPGKKYFVGMPIPAGAGVIAATVHLKGGEPVNVWWVSVVWIALLVLVGFLMV
                     STWRFYSFKDLNLRNRHPFWMLVLICGLLATVWFFSKPVLFIIAISYMLSGVLTRLSV
                     LFRRRPSQPAPPAYQEAPEH"
     gene            3151..4191
                     /locus_tag="VE783_06240"
     CDS             3151..4191
                     /locus_tag="VE783_06240"
                     /inference="COORDINATES: protein motif:HMM:NF014793.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016620 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors, NAD or NADP as
                     acceptor [Evidence IEA];
                     GO_function: GO:0046983 - protein dimerization activity
                     [Evidence IEA];
                     GO_process: GO:0008652 - amino acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Asd/ArgC dimerization domain-containing protein"
                     /protein_id="HYX53031.1"
                     /translation="MRSEAQNLFKVAIIGAAGLKGKELKEVLEERNFPAIDIRLLDDN
                     DSLGQLESVQDEISFVQPVGRDQLEGVDFTFFASDEQFTRRNWKMAREAGSAIVDLSY
                     SLEASDGVPVSSPWIERELGEHAQLKLDQHAIVAAHPAAVALALLLLRARNAGALQRA
                     IATIFEPVSEQGRRGMDELHEQTVNLLSFQQMPKQVFDTQVAFNMLGRYGPEAGHALE
                     EAERRIADHFQKLVGSHLQVPALTLVQAPVFHAHTFSIYVELEKSISAGDFARALGGE
                     HVKLARSPEEAPSNVNVAGKDEILLAVRRDAAHENGLWIWAAVDNLRLAALTAVDCAN
                     ALAAVRPHGKVQ"
     gene            4188..4706
                     /locus_tag="VE783_06245"
     CDS             4188..4706
                     /locus_tag="VE783_06245"
                     /inference="COORDINATES: protein motif:HMM:NF016290.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LptE family protein"
                     /protein_id="HYX53032.1"
                     /translation="MKPIAGWLLLAVMLLSGCGYHAIGHGNRLPQDVHTLAIPMFINQ
                     TQTYAVEQILTRDVAREFIGRTRYRVVTESSDNVDAVLKGTVLSAQAAPLTYDAQTGR
                     ISSAEVTVTMKVTLADRSGRVLFENPNYSFREQYQVSREVTSFFQEETPALQRLSRDF
                     ARTLVSDILEAF"
     gene            4706..5836
                     /gene="holA"
                     /locus_tag="VE783_06250"
     CDS             4706..5836
                     /gene="holA"
                     /locus_tag="VE783_06250"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: protein motif:HMM:TIGR01128.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009360 - DNA polymerase III complex
                     [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit delta"
                     /protein_id="HYX53033.1"
                     /translation="MPGRSFAPSEKFMAEVAGGKLRPGYVLIGDEVFFRDQCRQALLQ
                     QLVPDDLRDFSLHDLDLGEVSVAEVLDRARTPSLMAPFQVFFVRGVKNLYGRGSHAEE
                     FAAIEAYMKDPNPAAVIIFVADHVSIPADVRRMDMQDKDRYERIRETLGQYCGIVELA
                     RVEESDGMRWIMERGQKEDVKVDHDAARELMDALGSDMMLVSRELEKLILYVGEKKHI
                     TLGDVETMVLAAKQRSLYELTDAISAKDKARSLAVLDALLSSSEGEDAAIGHLYMLAR
                     TFRQMLVILEKNVRDSRTIWQALWQGFRVPPFAAEDIIRQARRYKSRRELTRALKLLA
                     RADLQLRSNPPSRRLVLEQLVMQLAEEPRVINSEWQQDELPV"
     gene            complement(5840..>6310)
                     /locus_tag="VE783_06255"
     CDS             complement(5840..>6310)
                     /locus_tag="VE783_06255"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HYX53034.1"
                     /translation="PPYHYGSQTAGLFGLIGATGALAAPISGRTSDRRGPRFVVAIAL
                     GIVVLAYAVFWGFGFHLIGLIVGVILLDGGVQAAQVANQYRVFALRPDARNRVNTIYM
                     ICYFGGGSLGSLAAAWAWSRWQWNGVCAVAIAFIVVGILLFVRRVPDAAGVVAR"
BASE COUNT         1276 a         1871 c         1835 g         1328 t
ORIGIN      
        1 gaatcgacac atccggcaaa tccggcggcg tcaccctcgc cgaaggtgac gcgcatagct
       61 ttcgcgtgct gggcagctcc gccatcagcg gcggcacctt ttcggctcag cttgtgccca
      121 ccgtggcagc tctgctcgaa gagcgcaagc tcaccgtgca tgacgtcaac ggactctgtg
      181 tcgcttcggg tcccggatct ttcaccggac tgcgcgtcgg cttaagcgcc gtcaaaggtc
      241 tggcagaagt gcttcatatt cccattgctg cggtctctct tctggctgcc ctcgctagcc
      301 ggtcccatgc caaaggcacc gtgctggcgg cgctggatgc gggccgaggc gagttttttg
      361 tcggtacgta tttcaaggat gctgatacaa attcgcagcg ctgcgtggac gaatcgctgc
      421 gcacgcgggc ggaactgctg gcacagatcc aggcatctcc atctccggcg ctgatcacct
      481 gcgatgaatc ggtggcccag gccgccagcg aaaccggcat atctcttgaa accgtctccc
      541 ggcctgacag tgctctgatt gctcagcttg gccttgagcg cctgctggcc ggagataccg
      601 tcgcaatcga agccttggac gccaactatc tgcgccgctc agacgctgaa atctttttca
      661 aaggcacgcg ctgaatggtt cagatacgtc aggctgttcg ggtcgacttg attcatattt
      721 tggaacttgc cgcacgggag ccatcatctg cattatggcc cgcagagaaa tatgacaact
      781 attttgcaca gaaaacagag cagaaatggc agttgcttct cgcctcggag ggaggtacgg
      841 tcatcggctt tatcgcagcc cgttcgctac atgatgaatg cgagattgag aacattgtgg
      901 ttagtcgatc catgcagcgg cgcggagtcg cttcagagtt gctcaaacac ctgttctcga
      961 ccctaagtga cagaattgaa agagttttcc tggaagttcg cgaatcgaac cagccagcca
     1021 tccggctcta cgaaaaggcg ggctttatgg aggtcggtcg ccggaaaagc tattatcggg
     1081 agccgccaga agatgccctg attatgaaaa aaagttttgg taaattggct tgaaattccg
     1141 ttgaaaccgc tcctgccgtg tgttaacgtt cgatgaagaa caggaggttc gttcggatgg
     1201 tagattccgt tcgcgaacag cttcttgcca gccacgatga gtttcgtcgg ctggctcagg
     1261 aacacactca gtactcccag cgcctcgaat ctctcctcga taaacgttat ctttccgacg
     1321 atgaaaagct tgaagaagtc cgcttgaaga agctcaagct gcgtctgaaa gaccagatgt
     1381 ttacgatcga gcaggaattc aggactggac ggacccaggt agcgtaagga ccgactttct
     1441 gatcgcataa cctctcttcc tgaagccctt gcgctcaggt aagagaggtt tgtgtttttg
     1501 cgccacttcc gcgcgccacc tcgaccgcat tcttttcctc gctcaatgtt ccattcacgc
     1561 cactctccgg agcttggcct ctcgctataa tcttaggaat ggttcgcgat gggctctatt
     1621 atgcggcagg catgctggtg gttgcggccg tgctttggtg gctggcagcg ccggcagcgg
     1681 cggtcgttcc aatacttttt gctttgttct ttctctggtt cttccgcgat ccggagcgca
     1741 ccatctcgca ggaaccgggg ctgattgtgt ccccggcaga cggcaaagtg acggaagtcg
     1801 ccagcacgca gtttaaaggc cagccttaca cgcgcatcag catttttctc aacgtcttca
     1861 acgtgcacgt gaatcgctcg cccatctcgg gagtgatccg cgaggtcgtg tatcagcgcg
     1921 gcaagttcgg caacgccatg gcggaaactt cggccaatgc aaacgagcag aacatagtta
     1981 ccgtggaagg cgaggggatg acgatcgtct tcaagcagat tgccggattg ctggcgcggc
     2041 gcatcgtctt caacggcaag cccggagaca cgctggcccg cggtcagcgc gtagggatga
     2101 tcaagttcgg ctcgcgcact gatgttatct tccccgagcc aaatcaggtg agcgtaaagg
     2161 tgggcgataa cgtaaagggc gggtcttcca tcctggcgcg cgtcggtaag cggcaagatt
     2221 tgaagccttc gcctgctcca caaaccacgg aggccacacg atgaagattc ccgcgcccat
     2281 gcggcggtgg gaagaccagc tgcctgcgga gcagcggcgc cgcatgcgca agggcatgta
     2341 cattctgcct tcattcttta ccgcggccaa catcggtgca ggatattacg ccatagcaga
     2401 ggcgattcgc gcagctcaag ccagctctgt ccattttgat cgggccgccc ttgccatagg
     2461 cattgccatt gttgctgacg gactcgatgg ccgcatcgct cgcatgacca ataccaccag
     2521 tgatttcgga cgcgagtttg actcgctggc agacgtcatc acctttggcg tggcccctgc
     2581 catcctcgcc ttcctgtggg gctttcactg gctctgggaa tacgattttg agagcacggc
     2641 agtgttggcc cgtgtggcgc agcttgggtt ggtggcaagc tttatctatc tggtggccgg
     2701 ggccagccgc cttgccaggt tcaatattca agccaatcca cagccctcca atcccgggcg
     2761 tccggggaag aagtatttcg taggcatgcc gattcccgcg ggtgcaggcg ttattgccgc
     2821 caccgtacac ctcaagggtg gggagccggt gaatgtctgg tgggtttcgg tcgtctggat
     2881 tgctctgctg gtactggtcg gctttttgat ggtgagcacc tggcgttttt acagcttcaa
     2941 agacctcaac ctgcgcaacc ggcatccttt ctggatgctt gtcctcatct gcggattact
     3001 cgccacggtt tggttctttt ccaagccggt gctgttcatt atcgccattt cctatatgct
     3061 gagcggggtg ctcacgcggc tctctgtcct cttccgccgc cggccctcac agcccgcgcc
     3121 tcccgcttac caggaggcgc ctgaacattg atgcgaagcg aagcccaaaa cctgtttaag
     3181 gttgccatca tcggagcggc cggcctgaag ggcaaggagc tcaaggaagt cctggaagaa
     3241 cgcaacttcc ccgccatcga tatccgcctg ctggatgaca acgattccct ggggcagctt
     3301 gagagcgtgc aggacgagat ctcctttgta cagccggtag gtcgtgacca gctcgaaggg
     3361 gtggatttca ccttcttcgc cagtgacgag cagttcaccc gcaggaattg gaaaatggct
     3421 cgcgaagcgg gctccgccat cgtggacctc tcgtactcgc tggaggccag cgacggggtc
     3481 ccggtcagct cgccatggat cgaacgtgaa ctgggcgagc acgcgcagct aaagctcgac
     3541 cagcatgcaa tcgtcgccgc ccatcctgcg gcagtggctt tggctttgct gttgctgcgg
     3601 gcgcgcaacg ccggcgcgct tcagcgggcc atcgcaacca tcttcgagcc tgtctccgag
     3661 cagggccgcc gcggcatgga cgaactgcac gagcagaccg taaacctcct ctcattccag
     3721 cagatgccca agcaggtttt tgacacgcag gtcgcgttca acatgctggg gcgttacggt
     3781 cctgaagcag ggcacgcgct cgaagaggct gaacggcgaa tcgcggatca tttccagaag
     3841 ctggttggca gtcacctgca ggtccccgcc cttacgctgg tacaggcccc ggtctttcac
     3901 gcacatactt tttccattta tgttgagctg gaaaagagca tctccgccgg agattttgca
     3961 agggctctgg gcggcgagca tgtgaaactg gctcgcagtc cggaggaagc gccgagcaat
     4021 gtgaacgtcg ccggaaagga cgaaattctt ctggcggtcc ggcgcgatgc cgcacacgaa
     4081 aatggcctat ggatctgggc tgccgtggat aacctccggc tggcagcgct caccgccgtc
     4141 gattgcgcca atgccctggc cgcggtgcgt ccgcacggaa aagttcaatg aagcccatcg
     4201 ccggctggct gctcctggca gtaatgctgc tgagcggctg cggctatcat gccatcggcc
     4261 acggcaaccg cctgccgcag gatgttcaca ccctggccat accgatgttc atcaaccaaa
     4321 cccagactta cgcggtggag caaatcctca cccgcgacgt ggcgcgcgaa ttcatcggac
     4381 gcacccgtta tcgtgtggtt accgaaagca gtgacaatgt tgatgcggtg ctgaaaggca
     4441 cggtcctctc cgctcaggca gctccgctga cttacgacgc ccagaccggc cgcatctcca
     4501 gcgcggaagt cacggtcaca atgaaggtca cgcttgctga ccgcagcggc cgcgtacttt
     4561 ttgagaatcc caactacagc ttccgtgagc agtaccaggt ttcgcgcgaa gtcaccagct
     4621 tcttccagga agaaacgccg gcgctgcaac gcctttcccg cgactttgcc cgcacgctgg
     4681 tgagtgacat tctggaggcg ttctgatgcc gggccgaagt ttcgctccat cggaaaaatt
     4741 catggcggaa gttgcgggcg gaaagctgcg tcctggctac gtgctgattg gcgacgaggt
     4801 ctttttccgg gaccagtgcc gccaggcctt gttgcagcag ctggttcccg acgatctacg
     4861 cgacttcagc ctgcacgatc ttgatttggg cgaggtgagc gttgctgaag tgctcgatcg
     4921 cgcgcgtact ccatccctga tggctccgtt tcaagtcttc tttgtgcgcg gagtcaagaa
     4981 cctttatggg cgaggctcgc acgcggagga attcgcagcc attgaagcct acatgaaaga
     5041 tccgaatccg gctgcggtga tcatctttgt cgccgaccac gtaagcattc ccgccgacgt
     5101 ccgccgtatg gacatgcagg acaaagaccg ttacgagcgc atccgggaaa cgctggggca
     5161 gtattgcggg attgttgagc tggcgcgcgt ggaagaaagc gatgggatgc gctggatcat
     5221 ggaacgcggc cagaaagaag acgtgaaggt tgatcacgac gccgcccgcg agctgatgga
     5281 tgcgctcggg tcagacatga tgctggtcag tcgcgaactg gaaaagctca tcctgtacgt
     5341 gggcgagaaa aagcacatta cgctcggcga tgtagaaacc atggtgctcg cggccaagca
     5401 gcgttccctc tatgaactca cggatgcgat ctcagccaag gacaaggctc gctcccttgc
     5461 cgtgcttgac gctctgctct caagcagtga gggcgaagat gcagctatcg ggcaccttta
     5521 catgctggcg agaacattcc ggcagatgct ggtgatcctg gagaagaacg tccgcgactc
     5581 gcggaccatc tggcaggctt tgtggcaggg cttccgcgtt ccgccgtttg cggccgaaga
     5641 catcattcgc caggcacggc gttataaatc ccgtcgcgag ctcacacgcg cgctcaagct
     5701 gctggcccgc gctgatctgc aactccgctc caacccgccc agccgccgcc ttgtccttga
     5761 gcaactggta atgcaacttg ccgaagagcc tcgtgtgatc aacagtgaat ggcagcagga
     5821 cgaactgccg gtttagccct cagcgcgcaa ccaccccggc ggcatccgga acccgccgca
     5881 cgaatagcaa aattcccact acgatgaagg cgatcgcaac agcacaaact ccgttccatt
     5941 gccagcggct ccatgcccac gccgccgcaa gagagccgag cgagcctccg ccgaagtaac
     6001 agatcatata aatggtgttt acgcgatttc gtgcgtccgg gcggagcgca aacacccgat
     6061 attgattggc cacttgcgct gcctggacgc ccccatcgag cagaatcacc cccacaatca
     6121 gtccgatcag gtggaacccg aacccccaaa acactgcata cgccagcacc acgattccca
     6181 gcgcgattgc taccacgaac cgtggcccgc gccggtctga agttcgcccc gagatgggcg
     6241 cggccagcgc gccggttgcg ccgatcaggc caaagagtcc ggcagtctgg ctgccgtagt
     6301 gatagggcgg
//
LOCUS       DASQYP010000194         5645 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_74618, whole genome shotgun sequence.
ACCESSION   DASQYP010000194 DASQYP010000000
VERSION     DASQYP010000194.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 5645)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5645)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5645
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_74618"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..712
                     /locus_tag="VE783_06260"
     CDS             <1..712
                     /locus_tag="VE783_06260"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53035.1"
                     /translation="ETTIYLQQDRSRTELRFQDGRPLQGVGPTVVRCDLRQALDYPPN
                     SVSYTARPYPPPRVTEEMARTLGLRTTPNYRTAEPTLRIETTYKDTGERREAFGLTAR
                     HIIITERQIPNEDRRTLPRTEIIDGWFINLEIRTSCERQYAIDARNDPVFYRNETIEN
                     IETTKAGDVPDPTQSWIAVESKHVAWQSYPNYDGTMKEVFQGGNKERLTKIEEVPMDP
                     ALFGPLAFYGRVPSNGLR"
     gene            complement(805..1200)
                     /locus_tag="VE783_06265"
     CDS             complement(805..1200)
                     /locus_tag="VE783_06265"
                     /inference="COORDINATES: protein motif:HMM:NF013970.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system VapC family
                     toxin"
                     /protein_id="HYX53036.1"
                     /translation="MKYLLDTVIFLWNLHSPEKLNNKAQQLLASQHDEIFFSAVSSWE
                     VVIKYARGKLMMPQPPWQILPEAITRFGALALPITHAHTLAVGQLPAHHSDPFDRMLI
                     AQAQTEKMVLMTAEKLIEKYPVETFWCGK"
     gene            complement(1197..1490)
                     /locus_tag="VE783_06270"
     CDS             complement(1197..1490)
                     /locus_tag="VE783_06270"
                     /inference="COORDINATES: protein motif:HMM:NF014643.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system Phd/YefM family
                     antitoxin"
                     /protein_id="HYX53037.1"
                     /translation="MEVNIHQAKTHLSKLLQRVALGEEIIISKAGVPIARLVPVQVQG
                     KRPLGLYKGQFWIADDFDAPLPADILAGFLGEEEPAKPTAKKAPQPRGKRRRA"
     gene            complement(1617..2726)
                     /locus_tag="VE783_06275"
     CDS             complement(1617..2726)
                     /locus_tag="VE783_06275"
                     /EC_number="3.1.1.103"
                     /inference="COORDINATES: protein motif:HMM:NF012371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase domain-containing protein"
                     /protein_id="HYX53038.1"
                     /translation="MQWSRVVVFCLLGWIPALCQPRLDTASISQINQKVTEFMAKTSS
                     PGISVAIVKNGEFVWADGYGMADLENNVPATNETEYRLGSVSKPLSATGAMWLVEHGK
                     LDLDAPVQKYCPAFPQKKSPITTREVLSHTAGIRHYKSDSRDDPDISSTKHYDSIHDA
                     LKVFANDDLVAEPGTKFNYSTFGYTLLGCVIEGASGQKYIDFMQRTIFAPSGMTHTQD
                     DDEHRIIAHRAQGYQKDERGGVINSELADTSYKVPGGGLISNVEDMARFEAALLNNKL
                     LRTETRQQMWSRQAPSADPKRAYGFGWGMSDLFGFPTVGHAGAQQRVTTAIIIQPEHK
                     AGVVVLCNMENVDTFALAAELLRIVVGEGSPSPAG"
     gene            2853..5279
                     /locus_tag="VE783_06280"
     CDS             2853..5279
                     /locus_tag="VE783_06280"
                     /inference="COORDINATES: protein motif:HMM:TIGR03434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HYX53039.1"
                     /translation="MESILQDLRYGLRTLIKSPRFTVAAVITLALGIAANVAIFTFVD
                     ATLLRPLPYKDVRQLVEIYDSRQQTIGSQFEASYPDYLDWKQQNQVFSAMAGYSGGGT
                     VLRGQGAPEVLPGAVVSDDFFKTLGARPAVGRDFAPGEDLASAPRTVILSYGFWQRRF
                     GGKPDTIGQAVTLGKDQVTIIGVLPPGFHFAPVGDPDVWQPLQATGGLRDRRNLHWLN
                     VIARLKPGVSRETAAAGMKVVTEALEKQYPASNTNLRTIIVPLNDVIVGKIRPILLLL
                     LGAVVLLLMIACSNVANLLLARSLSRRREVAVRTALGASRWRLVRQMLTEGILLSLTG
                     AVLGLALAVSMVKVFVAAIPQSLLNNMPYLKTMSIDGAVLLFALGIAVVTGVLFALAP
                     AFQLSGDHVQDAFRDGARSTQSSGWRRFASALVVGEVAVSMVLLFGAGVLGKSFYRLL
                     QVDTGFNYHNVATLAAAAPSAQYKTGAQQIVFFRSLLDRVRAQPGVESAGITSTLPIG
                     QGNTSNVVVVGQPYTGQGFEANSRSVDTQYFQTLQAQLLAGRWFNETDLPEAPQRVIV
                     NKTFVDLFMKGLDPLLQQVRFTYNDKEKPRQVVGVVSDIKEGQLDAPALPAIYTPFLQ
                     DPGSFQYIVVRSRQDAAAALEQTKAAVRQQDPNAVTLQEQTMEDFIQRSPVAFFHRYP
                     AWLAGLFAFMALVLGTIGLYGVVAYSVSQRTQEIGIRMALGAQRSNVLNMVLLQGVRL
                     IVPGVMIGLAGGVGAGLLAQNLLFKVSAWDPQIFAIVTLVLAMVTLLASFIPARTATR
                     VDPMVALRYE"
BASE COUNT         1136 a         1634 c         1643 g         1232 t
ORIGIN      
        1 cgaaaccacc atctacctcc agcaggatcg ttcgcgtact gaacttcgct ttcaggatgg
       61 aaggccgctc cagggagtcg ggcccacggt agtccgatgc gacctgcggc aggcgttgga
      121 ttatcccccg aattccgtca gctacactgc acgtccatat ccgccgccgc gggtaaccga
      181 ggagatggcc agaactctag gcttgcgcac cacacccaac tatcgcaccg cggagcccac
      241 gctacgtatc gaaaccacct ataaggacac tggggaacgt agggaggcgt ttgggcttac
      301 cgcccgccac atcattatta ctgagcggca aattccaaat gaagaccgcc gaaccctgcc
      361 gcggaccgaa atcatcgatg gatggttcat caacctggag atacggacct cctgtgaacg
      421 gcagtatgca attgacgcca ggaacgatcc cgtgttctac cgtaatgaga cgatagagaa
      481 cattgaaacg acaaaggcag gcgatgttcc agacccgacg caaagctgga ttgcggtcga
      541 gtcgaagcac gtcgcctggc agtcttaccc caactatgac ggcaccatga aggaagtatt
      601 ccagggtggc aacaaggagc gccttacaaa aatcgaagag gtgcccatgg atccggcgct
      661 gttcggacca ctggcctttt atggcagagt gccctctaac ggattgcgat aggcagtggc
      721 agctcgtgcc atgcgcgaag tgctgaatgt gcgggggaca gtggctctct gaccgacggg
      781 aatgatcctc ggacattctg gcatttactt cccacaccag aacgtttcga caggatattt
      841 ttcgatcagc ttttccgcgg tcatgagaac cattttttcg gtctgggcct gagcgatcag
      901 catgcgatcg aaaggatcgc tgtgatgcgc aggaagttgg cccacagcga gcgtatgagc
      961 gtgagtgatc ggcaatgcaa gtgcgccgaa tcgggtgatt gcctccggca ggatctgcca
     1021 gggaggctgc ggcatcatca attttccgcg tgcgtacttg atcaccactt cccaggaact
     1081 cacagccgag aagaaaatct cgtcatgctg ggaagctagc aactgctgag ccttgttgtt
     1141 gagcttttct ggcgaatgca ggttccaaag aaagattacg gtatccaaaa ggtatttcat
     1201 gcccgcctgc gcttgccgcg cggctggggc gctttctttg ctgtgggttt cgcgggctcc
     1261 tcctcgccga gaaagccggc gagaatatcc gcaggcaagg gagcatcgaa gtcgtccgcg
     1321 atccaaaact ggcctttgta aagccctaac ggacgctttc cttgcacctg caccggcacg
     1381 aggcgcgcaa ttggaacccc agctttagaa atgatgattt cttccccgag cgctacccgt
     1441 tgcaggagct tggaaagatg agtcttcgcc tgatggatat tcacttccat gcgttttttt
     1501 aagtatgact aagttcataa actaagtcca cgaaattttt ttctttcggc gagggatcgc
     1561 cgataacgat taaccgactt gcaccctctg cagccattat tgtgaatgcg tttttgttat
     1621 cccgctggtg aggggctgcc ctcccccacc acaatcctca acaactcagc cgcgagcgca
     1681 aacgtgtcca cattctccat gttgcacagc accaccactc ctgccttatg ttccggctga
     1741 atgataatgg cggtggtgac gcgctgctgt gcgcctgcat ggcccacagt cgggaagccg
     1801 aaaagatcgc tcatgcccca gccaaagccg taggcgcgct tgggatctgc gctgggcgcc
     1861 tgcctgctcc acatctgctg gcgcgtctcc gtgcgcagta acttgttgtt cagcagtgcg
     1921 gcttcgaatc gggccatgtc ttcgacgttc gaaatcagcc cgccgcccgg aactttgtag
     1981 ctggtgtccg ccagttcaga gttaatcacc ccgccgcgct cgtccttctg gtacccctgc
     2041 gcgcgatgag caatgatgcg gtgctcatca tcatcctggg tgtgggtcat gcccgacggc
     2101 gcaaagatcg tccgctgcat aaagtcgatg tacttttgcc ctgacgcacc ttcgatcacg
     2161 cagcccagca gtgtgtagcc gaacgtggaa tagttgaact tcgtgcccgg ctctgccacc
     2221 aggtcatcat tggcgaacac cttcagggca tcgtggatgg agtcgtaatg cttcgtgctg
     2281 ctgatgtccg gatcatcccg cgagtcgctc ttgtaatggc gaatgcccgc ggtgtgcgag
     2341 agcacttcgc gcgtcgtaat cggcgatttc ttttgcggga acgcggggca gtacttctgc
     2401 acgggtgcgt ccagatcaag tttgccgtgt tccaccagcc acatggcacc cgttgctgag
     2461 agcggcttgg aaaccgaccc cagcctgtac tccgtttcgt tggttgccgg cacattgttc
     2521 tcaaggtccg ccattccgta gccgtccgcc cagacgaact cgccgttttt tacgatggcc
     2581 acagaaattc ccggcgagct cgttttggcc atgaactctg taactttttg gttaatctgg
     2641 ctgattgagg ccgtatccag cctcggctgg cacagggcag gaatccagcc cagcaggcaa
     2701 aacacaacaa ctctgctcca ttgcatagcg ggagattgta aaccccgtcc ctcttcccgc
     2761 gtctaaaacg tcagtccaga aaccttttct gctgcgccga gtattcaacg ccagggctat
     2821 tgtccgccgc ggccctccaa aggagatggg tcatggaatc aattctgcaa gacctgcgtt
     2881 atgggctccg aactctgatc aagtcgcccc gtttcacggt ggcggcggtg atcacgctgg
     2941 ccttgggaat tgcggccaac gtggcgatct tcacctttgt cgatgccacg ctgcttcgtc
     3001 cgctccccta caaggatgtg cggcagctcg tggaaatcta cgactcgcgc cagcagacca
     3061 tcggttcgca gtttgaggct tcctatccag actacctgga ctggaagcag cagaaccagg
     3121 tcttttccgc gatggccggc tacagcggcg gcggaacggt gttgcgcggg caaggcgctc
     3181 cggaagtgct gccgggcgcg gtggtgagcg acgatttctt caaaaccctg ggagccaggc
     3241 ccgcagtggg ccgcgatttc gctcccggtg aagatctggc atccgcgccg cgcacggtga
     3301 tcctgagtta tggattttgg cagcggcggt tcggcggcaa acccgacacg atagggcagg
     3361 cggtaacgct gggcaaagac caggtgacga tcattggcgt gctgccgcca ggtttccatt
     3421 ttgccccggt aggtgatccc gacgtctggc agccgttgca ggccaccggc ggcctgcggg
     3481 atcgccggaa ccttcactgg ctgaatgtaa tcgcgcgact caagcccggt gtctcgcggg
     3541 agacggcggc cgccggcatg aaagtcgtga ctgaggcgct ggaaaagcag tatcccgcgt
     3601 ccaacaccaa cctgcggacc atcatagttc cactcaatga cgtgattgtg ggaaagatcc
     3661 gccccattct tctgctattg ctgggggcag tggtgctgct gttgatgatt gcctgttcca
     3721 acgtggctaa cctgttgctg gcgcgttcgc tttcacggcg gcgcgaagtc gcagtgcgca
     3781 ccgcgctcgg cgccagccgc tggcggctgg tgcgacaaat gctcacggaa ggcatcctgc
     3841 tttcgctcac cggggcagtg ctgggattgg cattggcggt aagcatggtg aaggtgttcg
     3901 tcgcggcgat tcctcaaagc ctgctgaaca acatgcctta tctcaagacg atgagtattg
     3961 atggcgccgt gcttcttttc gccctcggca tcgcggttgt cacgggagtg ctctttgccc
     4021 tggctccggc tttccagctt tcaggagacc acgttcagga tgcgttccgc gatggcgcgc
     4081 gcagcacgca atcttcaggc tggcggcgct ttgcttctgc gctggtggtg ggtgaagtag
     4141 ctgtgtccat ggtgttgctg ttcggcgccg gcgtgctggg caagagcttc tatcgactgc
     4201 ttcaggtaga taccggcttc aactatcaca acgtagccac cctggccgca gcggctcctt
     4261 ccgcgcaata caaaactggc gcccagcaaa tcgtcttctt caggtcgctg ctggaccgcg
     4321 tgcgggcgca gcccggcgtg gaatccgcgg gcatcacctc taccttgccg atagggcagg
     4381 gcaacacttc caacgtcgtg gtggtcgggc agccttatac cgggcaggga tttgaggcta
     4441 acagccgctc agttgacacg caatattttc agacgctcca ggcacagcta ctggcgggca
     4501 ggtggttcaa cgagacagac ttgcccgaag cgccgcagcg ggtgatcgtc aacaagacct
     4561 tcgtggactt gttcatgaag ggcctcgacc ccctgttgca acaagtgcgt tttacctata
     4621 acgacaagga gaagccgcgg caggtggtcg gtgtggtcag tgacatcaaa gaaggccagc
     4681 ttgatgcccc agctttaccg gccatctaca cgccattcct gcaggaccct ggttcttttc
     4741 aatacattgt ggtgcgcagc cggcaggatg cagcggcggc acttgagcaa accaaagcag
     4801 ccgtgcgcca gcaggacccg aacgccgtaa ctttacagga acagaccatg gaagacttca
     4861 ttcagcgctc gccggtggca ttcttccatc gctacccggc atggctggcc ggattgttcg
     4921 ccttcatggc gctggtgctg gggaccattg ggctgtatgg cgtggtggct tattcggtca
     4981 gccagcggac gcaggagatc ggtattcgca tggcgctggg cgcgcagcgc agcaatgttt
     5041 taaacatggt attgctgcaa ggtgtgaggt tgattgttcc cggagtcatg atcggcctcg
     5101 ccggcggggt cggtgcaggt ctgcttgcgc agaacctgct gttcaaggtc agcgcctggg
     5161 atccgcaaat ctttgccatc gtaacgctgg tgctggcaat ggtgacgctg ctggccagtt
     5221 tcattccggc acgcaccgca accagagtgg acccgatggt ggcgctgaga tacgaataag
     5281 gagaaatgcg gattcttaca ccgaagcttc acggaactgc ggggcgaccc tcgaatactc
     5341 cagccgaagc gcggaaagga ggcattctta ggttctgaag gtgttccttg gcgatgcccc
     5401 tccgcccctc accaaagatc ccaagccact gaaggactca tcccgaatcc tgagcgcgag
     5461 cgaatgctag cgcgaatggt gagggcctgc tgcagcctca cgtgagccgc gttacttcct
     5521 tgcatcttct atatttccag aatcaaattt tctcggaatt cgaatgattg cacccgaaag
     5581 ccagtcgcgc agcgacggca taatctgtag ccggggacgg cagtccccgg tgaaagtgcc
     5641 tggct
//
LOCUS       DASQYP010000195         2964 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_92337, whole genome shotgun sequence.
ACCESSION   DASQYP010000195 DASQYP010000000
VERSION     DASQYP010000195.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 2964)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2964)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2964
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_92337"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..437
                     /locus_tag="VE783_06285"
     CDS             <1..437
                     /locus_tag="VE783_06285"
                     /inference="COORDINATES: protein motif:HMM:TIGR00044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="YggS family pyridoxal phosphate-dependent
                     enzyme"
                     /protein_id="HYX53040.1"
                     /translation="LFSAVDSVDSLRLAEKLNSAASELGKKLEVLIEIKVGTEESKEG
                     IPPASPELESLLTAAPRLQNLAIRGLMAIPPHTEDPEGARPYFRLLRDLRDQIIARKL
                     PAVSMDVLSIGMSHDFEVAVEEGSTCVRVGTAIFGARPTPAL"
     gene            434..730
                     /locus_tag="VE783_06290"
     CDS             434..730
                     /locus_tag="VE783_06290"
                     /inference="COORDINATES: protein motif:HMM:NF014633.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF167 domain-containing protein"
                     /protein_id="HYX53041.1"
                     /translation="MIPLNETAKGVTFAVKVQPRARKNEITGTVGDALKLALTAPPVE
                     GKANQAVIDFFADLFDIPRSSVTIASGETSRNKVIRVSGISAMQVRQRLSATLT"
     gene            744..2027
                     /locus_tag="VE783_06295"
     CDS             744..2027
                     /locus_tag="VE783_06295"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HYX53042.1"
                     /translation="MSFSQRLQEVRTGFERPFWVANVTELFERLSYYAAFAVIVRYLH
                     ENLRFSTTEAGTLAGQFGTWVWILAIFGGTIADRLGFRRALSLAYLILTAAYFLMGSL
                     GANWLAPVRNAVPLTLFVTIIMVLPALGIAMVKPCVVGTTARASQENVRSIGYSIYYT
                     LVNIGGAAGPLTASWVQGHMSVENVFRVAAFSVFIMFFAVLLLFKEPKKTDEVQVTSI
                     GQTIRNFGTVVSNPRFMLFLLIFSGYWIVYWQIFLSLPLYIHDYVNPNTDTARMLSTG
                     PILVIALTVAISVALRKMRAFRAVTLGTLISALAWVVLIVYPSVPGGYLTLAVVALGE
                     IILSPRYYEYVSLLAPSGQQGTYMGFAFLPIGIGAFIGGPLGGALLHHFGEVQHKPAL
                     FWWCFTGIGVLTAVLLWIYDRIFKPTGNDSKASAA"
     gene            complement(2043..2429)
                     /locus_tag="VE783_06300"
     CDS             complement(2043..2429)
                     /locus_tag="VE783_06300"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxypeptidase-like regulatory
                     domain-containing protein"
                     /protein_id="HYX53043.1"
                     /translation="MKRTILLVLAFCLSAGAQSKTELSVTVLDQLGAVISDAQVRVHW
                     DHSGSNVGLKDNIGVAQDLVLETDKTGHAKIELPPGFYDVFVAAPAFTPQAFKIRVKK
                     EPQGVLFKLKADPLVTHELGDKFPTK"
     gene            2621..>2964
                     /locus_tag="VE783_06305"
     CDS             2621..>2964
                     /locus_tag="VE783_06305"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53044.1"
                     /translation="MDLKAIQAALHERNIDAWLFYDHHHRDPIAYKVLGIPESLMVTR
                     RWFYVIPREGEPVKLVHRIEAGHLDSLPGSKRQYSSWRELWDNLQAMLVKFRNVAMQY
                     SPNNAIPYIGLV"
BASE COUNT          585 a          874 c          809 g          696 t
ORIGIN      
        1 agctctttag cgcggtcgat tcggtggact cgctgcggct cgcagaaaaa ctcaactctg
       61 ctgcctctga gctgggcaag aaacttgaag tgctgatcga aatcaaagtt ggcaccgaag
      121 agagcaaaga gggcattccg ccggcttcac ccgaattgga atcgctgctt acagcggcgc
      181 cgcgcctgca aaacctggcg atccgcgggc ttatggcgat tccgccgcac accgaagatc
      241 cagaaggcgc ccggccctat ttccggctgc tgcgcgatct gcgcgaccag atcatcgcgc
      301 gcaaactgcc ggccgtgagc atggacgtgc tttccatcgg catgtcgcac gattttgaag
      361 tcgccgtgga agaaggctcc acatgcgtgc gcgtgggcac agccatcttc ggcgcgcgcc
      421 ccactcccgc tctatgattc cgctgaacga aactgccaaa ggcgtcacct ttgctgtgaa
      481 ggttcaaccc cgagcgcgca aaaacgaaat caccggcacc gtaggtgacg ccctcaagct
      541 tgcgctcacc gcgccgccgg tggaaggcaa ggccaatcag gcggtgatcg acttttttgc
      601 tgatcttttt gacattccgc gctcctcggt taccatagcc agcggcgaaa ccagccgaaa
      661 caaagtgatt cgagtgagcg gcatcagcgc gatgcaggtc cgccagcgcc tgtctgccac
      721 actcacgtaa acaggagaaa agtttgtcct tctcacaacg cctgcaggaa gtacgtaccg
      781 gcttcgagcg gccgttctgg gtcgccaacg ttaccgaatt gtttgagcgg ctttcctact
      841 acgcggcctt tgccgtgatc gtgcgttacc tgcatgagaa cctcagattc tccaccacag
      901 aggcagggac cctggccggc cagttcggca cctgggtatg gatcttagcc attttcggcg
      961 gaaccatcgc ggaccgcctc ggctttcggc gggcgttgtc tctcgcctac ctgatcctga
     1021 cggccgccta ctttctcatg ggctcgctgg gcgcgaactg gctggcgccg gttcgtaatg
     1081 ctgtcccgct gaccttgttt gtaactatca tcatggtcct gcctgctctc ggcattgcga
     1141 tggtgaagcc gtgtgtggtg ggcacaacag cccgagcttc gcaggagaat gtcaggtcga
     1201 ttggatactc catctattac acgctggtaa acatcggcgg cgcggctggg ccgttaacgg
     1261 cctcgtgggt ccagggccac atgagtgttg agaatgtgtt tcgcgtggcg gctttcagtg
     1321 tcttcataat gttctttgcg gtgctcctgc tcttcaaaga gccgaagaaa acagacgagg
     1381 tgcaggtcac cagcatcggc caaaccatcc ggaacttcgg cacggttgtt tcaaacccca
     1441 ggttcatgct ttttcttctc atcttttccg gatactggat cgtctactgg cagatattcc
     1501 tgagcctgcc cctgtacatt cacgactatg taaatccgaa tacagatacc gcccgcatgc
     1561 tgagtacggg accgatactg gtcattgcgc ttaccgtcgc aatcagcgtg gccttgcgca
     1621 agatgcgcgc tttccgggct gtcacgctcg gcacgctgat ttcggcatta gcatgggtcg
     1681 tgctcattgt ttatccgagc gttcccggtg ggtatttgac gctggcagtc gtggctctgg
     1741 gcgaaattat tctttcccct cggtattacg aatacgtctc gctgctggcg ccatcgggac
     1801 agcagggcac ctacatggga ttcgctttcc tcccgattgg catcggcgca tttattggcg
     1861 gccccctcgg tggggctctg cttcaccatt ttggcgaggt gcagcataag ccagctcttt
     1921 tttggtggtg tttcaccgga atcggtgttc tgaccgcggt tctgctctgg atttacgacc
     1981 gcatcttcaa gcccactggg aatgacagca aagcttccgc agcgtgaggc catgcagcgg
     2041 attcatttcg ttggaaattt atcgccaagt tcgtgagtta ccagcggatc ggctttgagt
     2101 ttgaaaagca cgccctgtgg ttctttcttc acgcggatct taaatgcctg cggagtgaat
     2161 gccggagccg ccacaaacac atcgtaaaag ccgggtggga gttcgatttt cgcgtgcccg
     2221 gtcttatctg tttcaagcac caggtcctgg gccactccaa tgttgtcttt taagccaacg
     2281 ttgctgccgc tgtggtccca atgaactcga acctgcgcat cgctgatcac ggctccaagt
     2341 tggtcaagaa ctgtgactga cagctcggtt ttcgattgcg cgccggcgct caggcagaac
     2401 gccaaaacga gcaggatcgt ccgtttcatt ttcatagatc gcccttggca agcctccgca
     2461 cttaatcatt atcgatccgg acacactgtg ttggtggcca tactcttgca catcactgtt
     2521 ggtcgacacc ctttaactcg cctcgctcgg atgtggtaaa gcgtcccgga agcgaaggct
     2581 tcccctccaa atatggttaa atagaagatt cacgccactt atggatctga aagccattca
     2641 agctgccctg cacgagcgca atattgacgc gtggctcttt tacgaccacc atcaccgcga
     2701 cccgatcgcc tacaaagttc ttggtattcc tgagagcctg atggtgacgc gccgctggtt
     2761 ctacgtgatc ccgcgcgaag gcgagccggt gaagctggtg caccgcatcg aagccggaca
     2821 cctcgattcc cttcccggca gcaagcggca atactcttcc tggcgcgagc tctgggacaa
     2881 cctccaggcc atgctggtga aattccgcaa cgtggccatg cagtactcgc ccaacaatgc
     2941 catcccttac atcgggctgg tgga
//
LOCUS       DASQYP010000196         2975 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_224961, whole genome shotgun sequence.
ACCESSION   DASQYP010000196 DASQYP010000000
VERSION     DASQYP010000196.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 2975)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2975)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2975
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_224961"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1685
                     /gene="asnB"
                     /locus_tag="VE783_06310"
     CDS             <1..1685
                     /gene="asnB"
                     /locus_tag="VE783_06310"
                     /EC_number="6.3.5.4"
                     /inference="COORDINATES: protein motif:HMM:TIGR01536.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004066 - asparagine synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_process: GO:0006529 - asparagine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="asparagine synthase (glutamine-hydrolyzing)"
                     /protein_id="HYX53045.1"
                     /translation="ELIALGQSFRSHSDSEVLLKAYAQWGPECVKHFNGMWAFALWDE
                     QDRRLFCSRDRFGEKQLYFRSISDGECFWFASEIRPLLTAAGAVNEINEALVWDFLVY
                     GLADHTEETFFGGIHQLLPGHNLILRPGGEPQVWQYYQLQPETLEPGLTDEQLADGLR
                     QRLYEAVRLRLRSDVPLASFFSGGMDSASIVALADQIISARDADFVSDLRTYTNCYPP
                     GHHYDESPRVRAALPLLKNVEPVFIQASENSLQEELMDLVRTQEQPFHNVSIFASYNL
                     LRLVKEHGGAKVVLTGEAGDEMLAGYQRVYLPLFFRDMVLHLRWPSWVAETLSWGPAA
                     ACKWTAKGFFNDLPSSLRIAANRRANAVVGMMQPDFFSAHASREARWVEQWRRGPLQH
                     RLNADVTRFNLPQLLRHLDRNAMCFSIETRVPFLDPAVVEYCAALPARMKLRRGYSKY
                     ALRRAMENRLPDEITWNRKKLGFGMAEQFWFRHCAELMQQIPGLRQFVDVKALVKSLR
                     EEGTINQGYWLPVCIGLWMHHFIRPSAAQFHGGEGPYEVRSREKLSLHGVSE"
     gene            1682..2641
                     /locus_tag="VE783_06315"
     CDS             1682..2641
                     /locus_tag="VE783_06315"
                     /EC_number="4.2.1.47"
                     /inference="COORDINATES: protein motif:HMM:NF027681.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GDP-mannose 4,6-dehydratase"
                     /protein_id="HYX53046.1"
                     /translation="MKIAVTGGAGFIGAHLVSALLAQGHQVWTCDNFFMGHKQETLAW
                     RDRAMLVNLDLLDVERLRGSLQAFQPELLFHLAAIHYIPYCNEHPTESMRVNVEGTLN
                     LMLAAQSCSSIRGIFFASSAAVYGPTDKVHQESDATAPSDIYGLTKVLGEQIATHYAR
                     QSGTNYVLGRFFNVYGPAETNPHVIPVVLRQLIENNGHVRMGRTDTYRDFIYVDDLVR
                     ALLRIGEHLATETNVAATYNLASGQETSIQRMVELLGKAAGLKVEIVSEPVRVRAGDR
                     QYLRADISKVRRELGWEPKVMIEQGLEQTVKAALQPVTSGNTK"
     gene            2641..>2975
                     /locus_tag="VE783_06320"
     CDS             2641..>2975
                     /locus_tag="VE783_06320"
                     /inference="COORDINATES: protein motif:HMM:NF024831.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HYX53047.1"
                     /translation="MKVFLVSKAIYPERGGVELHVYRIAEGLLAMGHQVWALVEGKQQ
                     AETRSNGLRVVSSVSSGEFSRLLENHKPDVVHAHGARNVFAARALLAARRAGIRTVFT
                     PHCFYPAQDL"
BASE COUNT          574 a          868 c          890 g          643 t
ORIGIN      
        1 atgagcttat tgctctgggc cagagcttcc gttcgcattc tgacagtgaa gtcctgctga
       61 aggcttacgc gcagtggggg cctgaatgcg tcaagcactt caatggcatg tgggcgtttg
      121 ctctctggga tgagcaggac cgccggctct tctgttcgcg cgatcgcttc ggcgagaagc
      181 agctttactt ccgctcgatt tctgacggcg agtgtttctg gttcgcatct gagattcgtc
      241 cgctgctcac cgctgccggc gcagtaaacg agatcaacga agcgctggtc tgggacttcc
      301 tcgtttatgg ccttgctgac cacaccgaag aaacattctt cggcggcatt caccagcttc
      361 tacccggcca caatctgatc ctgcgtcccg gaggcgagcc tcaggtctgg cagtattacc
      421 agcttcagcc ggaaacattg gaacccggcc ttactgacga gcagcttgct gatggccttc
      481 gccagcgtct ctacgaagcg gtgcgtctcc ggctgcgcag tgatgttcct ttggcgagct
      541 tcttcagcgg cggcatggat tcggcgagca ttgtcgccct tgctgaccag attatctccg
      601 cgcgcgatgc cgactttgtt tccgacctgc ggacctatac caactgctac cctcccggac
      661 atcactatga cgagtcgccg cgcgtgcgcg ccgccttgcc gttgctcaag aatgttgaac
      721 cggttttcat ccaggcctcg gaaaattctt tgcaggaaga gctgatggac ctggtccgca
      781 cccaggagca gcccttccac aacgtctcca tctttgcttc ctacaacctg ttgcggctgg
      841 tgaaagagca cgggggcgcc aaagtggtgc tcaccggaga ggccggtgac gagatgctgg
      901 ccggctacca gcgcgtttat ctgccgctct tcttccgcga catggtgctg cacctgcgct
      961 ggccgtcgtg ggtcgcggag acactgagtt ggggcccagc cgccgcgtgc aagtggacag
     1021 caaaaggttt cttcaacgac ctgccgtctt ccctccgcat tgccgcgaac agacgcgcca
     1081 acgcggtggt aggcatgatg cagcccgatt tcttctctgc gcacgcatcg cgcgaagccc
     1141 gctgggtgga acaatggcgg cgcggtccat tgcagcatcg ccttaacgct gacgttacgc
     1201 gctttaacct gccgcagttg ctgcgccacc tggaccgaaa cgctatgtgc ttctccattg
     1261 agacgcgcgt gccgttcctg gatcccgcag tggtggagta ctgcgccgcg ctgcctgcgc
     1321 gcatgaagct gcgccgaggc tatagcaagt acgcgctgcg cagggccatg gaaaatcgcc
     1381 tcccggatga gattacctgg aacagaaaaa aattgggatt cggcatggcc gagcaattct
     1441 ggttccggca ctgcgccgaa ctgatgcagc agatcccggg cctcaggcag tttgtggacg
     1501 ttaaggcgct ggtgaaatcg ctccgggaag aaggcacgat aaaccagggc tactggttgc
     1561 ccgtttgtat tggtctgtgg atgcaccatt tcatccggcc cagtgctgcg cagttccatg
     1621 gtggcgaggg gccgtacgaa gttcgcagcc gggaaaaatt gagtttgcac ggagtatcag
     1681 aatgaaaatc gcggttacgg gcggagcagg tttcattggt gcgcatctgg tttctgctct
     1741 gctcgcacag ggccatcagg tatggacctg tgacaacttt tttatgggcc acaagcagga
     1801 gacgctggca tggcgcgatc gcgcgatgct ggtgaacctt gacctgctcg atgtcgagcg
     1861 gcttcgcggt tcgctgcagg cattccagcc ggagctgctc tttcatctcg ccgcgattca
     1921 ctacatccct tactgcaacg agcaccccac cgaaagcatg cgggtgaatg tggaaggcac
     1981 gctgaacctg atgctggcgg cgcaatcctg ctccagcatt cgggggattt tctttgcttc
     2041 cagcgcggcc gtctatggtc ccaccgataa agtacaccag gagagcgatg cgactgctcc
     2101 ttctgatatt tacggcttga ccaaggtcct gggcgagcag attgcgaccc actacgcgcg
     2161 ccagagcgga accaactatg tgctggggcg gttcttcaat gtctatggcc ccgcggagac
     2221 taacccgcat gtgattccgg tggtgctccg gcagcttatt gaaaacaacg ggcacgtgcg
     2281 catgggacgc acggacacct atcgtgactt catttatgta gacgatctcg tgcgcgccct
     2341 gctgcgcatc ggcgagcatc tcgccaccga aacgaatgtg gcggcgacct acaacctcgc
     2401 gtccggccag gaaacctcca tccagcgcat ggtggagttg ctgggcaagg cagccgggtt
     2461 gaaggtggaa attgtctctg agccggtacg cgtccgcgcc ggtgaccggc agtacctgcg
     2521 cgccgatatc agcaaggtcc ggcgcgaact gggttgggaa cccaaagtaa tgatcgaaca
     2581 aggattggag cagacggtta aggcggccct tcagcccgtg acttccggca acacaaagta
     2641 atgaaagttt tcctggtatc caaggcaatt tatccagaac gtggtggggt cgagctacat
     2701 gtttatcgca tcgccgaggg actcctcgcg atggggcatc aggtttgggc cctggtggaa
     2761 ggcaagcagc aggcggaaac gcgcagcaat ggcctgcgtg tggtcagttc cgtgagttcc
     2821 ggcgaattca gccggctact ggaaaatcac aaacccgatg tggttcatgc ccatggcgcg
     2881 cgcaacgtat ttgccgcgcg ggcattgctg gcggcccggc gcgccggcat tcgcaccgtt
     2941 ttcacaccac attgttttta tcccgcacaa gacct
//
LOCUS       DASQYP010000197         3499 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_197965, whole genome shotgun sequence.
ACCESSION   DASQYP010000197 DASQYP010000000
VERSION     DASQYP010000197.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 3499)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3499)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3499
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_197965"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(163..777)
                     /locus_tag="VE783_06325"
     CDS             complement(163..777)
                     /locus_tag="VE783_06325"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53048.1"
                     /translation="MIQNESHSHGHRTGIPWLDLILAGSAIFISVVSLIVSIHHGRTM
                     EQLVAANEKQVKASTLPILRFVTGNVTDNQKMIHFQLMNGGTGPAIIEWLQLKWDGQP
                     ATGPRDLLERCCSAGSPAKALSIWTDVASGTTLPARDSRNVLGVPAKGAGPALYDLLD
                     REARFKVEAEACYCSVLEECWQTDFRNQPREVKACERIPENQRW"
     gene            907..3126
                     /locus_tag="VE783_06330"
     CDS             907..3126
                     /locus_tag="VE783_06330"
                     /inference="COORDINATES: protein motif:HMM:NF013123.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S9 family peptidase"
                     /protein_id="HYX53049.1"
                     /translation="MKKFSFLLLITIFVVCSAAAQELTVESIYRTQGGLTGRAPSTIK
                     WSPDGKKVSYILNQENSEKAGLYYIDVATGKPAVLVASERISSFTPPPVKGGKDDRER
                     DNRARYHVAGYHWSPDSQHLLFDSNGQLWYYTLASGTAIAMTEADEPASDPKFSPDGR
                     MLSYLREHNLYITEIQGKHRRQLTRDGNDDLLNGEVDWVYSEELDARSNYFWSPNGKE
                     IAFLQMNEAKVPTYPILDYIPQHPTVYNEKYPKVGDPNPEVRLGVLNAAGTKLRWINL
                     TNDKDTYIPRFGWVRDGLMWAQLLNRAQNQLSLFFIDSGSGKVTRVLDEKSDTWIEMN
                     DDFQVLKSGDRFTWASWRDGHTHLYLYSFDKNSPLAGQAKLVNQITKGDFETHGLKAL
                     DESTGTLYLDANPGDDRQGHLCSVKLDGSDFQVLTKSEPGTHEAEFSPDSKAYVDHFS
                     ATMTPPQLSFCRVGGTCQVFWKSKSVEGYKLTTPQWVDFKAGDGTVLHGRIWLPPDTG
                     KKVPLINNPYGGPHGQVVRNAWDAGIFFNEILLLDGFAVLQVDNRGMGARGKKFAAAL
                     MHNFGEVELKDQFTAIDQALQRFPQLDGERLGWWGWSYGGYMTLYAMTHSDRVRSGVS
                     VAPVTDWINYDSIYTERYGGLLPEMAEAYKKSSPVYSASKLHGHLLEVHGTSDDNVHP
                     QNTMQMIYAFENAGVPFDLQVYPRKTHGISGPATRTHLFNRIRNHFRHDLLGAAPQP"
     gene            3123..>3499
                     /locus_tag="VE783_06335"
     CDS             3123..>3499
                     /locus_tag="VE783_06335"
                     /inference="COORDINATES: protein motif:HMM:NF012955.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HYX53050.1"
                     /translation="MTHSRITLGNFELIAVNDGAYLGDGGAFFGVVPKVLWQRKIKAD
                     DLNRIRVSCNSIVVRTGEKTVLIEAGIGNKLPEKTRSFFYPEMKLLENLQSAGIDPEK
                     IDVVINSHLHFDHCGWDTIYKDGA"
BASE COUNT          762 a         1035 c          959 g          743 t
ORIGIN      
        1 ggtaacggaa agataccaca ttgcgccggc agccatgcct ggatgtaacg ccaagactcg
       61 cagccacccg tcggcaaaga ttctttcctc cttgcagccg tatccgccgc cgcttcatta
      121 ccgcggttta caacgctccg ccgaacgcaa ccgcgcgtcc gtttaccagc gctgattttc
      181 cggaatacgc tcgcaagctt ttacctcgcg tggctggttc ctgaagtccg tctgccagca
      241 ctcttcaagt actgagcaat aacaagcttc ggcttcaact ttgaatcggg cttcgcgatc
      301 gaggagatcg tatagcgcgg gaccggcgcc cttggcagga acgcccagca cattccggct
      361 gtccctggcg ggaagcgtcg ttcctgatgc gacatcggtc cagatggaaa gtgcttttgc
      421 cgggcttccc gcgctgcagc agcgctccag caggtcccgc ggcccggtgg ccggctgtcc
      481 gtcccatttc agttgtagcc attcgatgat ggccggccca gtccctccgt tcatcagctg
      541 aaaatggatc atcttttggt tatcagtgac atttcctgtg acgaaccgca aaatcggcag
      601 tgtggaggcc ttgacctgtt tctcattcgc cgcgaccaac tgctccatcg tgcgtccatg
      661 atgaatggag acgatcagcg aaacaacgga aataaagatg gctgagccgg ccaggatcag
      721 gtcgagccag ggaatcccgg tgcgatggcc gtgcgagtgg ctttcgttct ggatcatcgg
      781 aggcgttcct tgaaaacagc agaagatgat aaatggtcaa ggcaggtttt gtgtttcctc
      841 tccccgcacc tcgctgcatc tccgggtgtt aaacttcttc gtttcttgct ttcaggagat
      901 tcttgcttga agaagttctc tttcctgctt ttgatcacga tcttcgttgt atgctccgct
      961 gctgcccagg agctgacggt ggaatccatt taccgcacgc agggtggcct cacgggtcgc
     1021 gcacccagca ctatcaagtg gagccctgac ggcaagaagg tttcctacat cctgaatcag
     1081 gaaaacagcg aaaaggccgg cctttattac attgacgtgg ccacgggaaa gccggcagtg
     1141 ctggttgctt cagaacgtat ttcgtccttc accccgccgc ccgtcaaggg aggtaaagac
     1201 gaccgcgaac gcgataaccg cgcacgttat cacgtcgcgg gctaccactg gtcgccggac
     1261 tcgcagcacc tgctcttcga ttccaacggc cagctctggt attacacgct cgcctctggg
     1321 acagcgatcg ccatgactga agcggacgaa ccggcgtccg atcccaagtt ttcccccgat
     1381 ggccgcatgc tctcctacct tcgcgagcac aatctctata tcactgagat tcagggcaag
     1441 catcgccgcc agctcacccg tgacggtaat gacgatcttc tgaacggtga agtcgactgg
     1501 gtctattcgg aagagctcga cgctcggagc aactattttt ggtcgccgaa cggaaaagaa
     1561 atcgcctttc tccagatgaa cgaggcgaag gtcccgacct accccattct ggattacatc
     1621 ccgcagcacc caaccgtcta caacgagaaa tatcccaagg tcggcgatcc caatccggaa
     1681 gtgcgcctcg gcgtgctgaa tgccgccggc acaaagctgc gctggatcaa ccttacaaat
     1741 gacaaagata cttacatccc tcgcttcggg tgggtgcgcg acggcctgat gtgggcgcag
     1801 cttctcaacc gcgcacagaa ccagctctca ctcttcttta tcgactccgg cagcggcaaa
     1861 gtaacccggg tacttgatga gaaaagcgac acctggattg aaatgaacga tgactttcag
     1921 gtgctcaaat ctggtgatcg ctttacctgg gccagctggc gcgatgggca cacgcatcta
     1981 tacctgtatt cgttcgataa gaacagtccg ctggcgggtc aggcgaagct ggtcaaccag
     2041 atcaccaaag gtgatttcga aacgcacggg ctgaaagccc ttgacgagag cacgggtacg
     2101 ctttacctgg atgcgaatcc cggggacgat cgccaggggc atttgtgcag cgtgaagctc
     2161 gacggcagcg acttccaggt gctgaccaaa tcagaaccgg gaacgcatga ggctgagttt
     2221 tctcccgact ccaaagcgta cgttgatcat ttctctgcca ctatgacgcc gccgcaacta
     2281 tcgttctgcc gtgtaggcgg aacgtgccag gtattctgga aatcgaagag tgtcgagggt
     2341 tacaagctca ccacgccgca gtgggtggac ttcaaagccg gggatggcac ggtgctgcac
     2401 ggacgcatct ggctgcctcc ggacaccggc aagaaagtcc ctttgatcaa caatccttac
     2461 ggtggccccc acggacaggt agtgcgcaat gcctgggacg ccggcatctt tttcaacgaa
     2521 attctgctgc tcgatggctt cgctgtcctt caagttgata atcgtggtat gggcgcgcgc
     2581 gggaagaagt tcgccgcagc cctcatgcac aacttcggcg aggtggagct caaagaccag
     2641 ttcacggcca tcgatcaggc gcttcagcgt ttcccgcagc tcgatggcga gcggctgggc
     2701 tggtgggggt ggagctacgg cggctatatg acgctgtacg caatgacaca ctccgaccgc
     2761 gtgaggtccg gcgtatcagt ggctccggtg actgactgga tcaactatga ctccatctac
     2821 accgagcgtt acggcgggct tctgccggaa atggccgagg cttacaagaa gagctctccg
     2881 gtttactctg cttctaagct gcacggccat cttcttgaag tgcacggaac ctcggatgac
     2941 aatgtgcatc cgcaaaacac catgcagatg atctatgcct ttgagaatgc gggcgtacct
     3001 ttcgacctgc aagtctatcc ccgcaagacc cacggtatca gcggcccggc aacgcgcacg
     3061 cacctgttca accgaatccg caatcacttc cggcatgatc ttctgggagc ggcgccgcag
     3121 ccatgaccca cagcaggatc acgctcggca actttgagct gatcgccgtc aatgacggcg
     3181 cctatctcgg cgacggcggc gctttcttcg gcgtcgtgcc caaagtcctg tggcagcgca
     3241 agatcaaggc agacgacctg aatcgcatcc gggtcagttg caactccatc gtggtccgca
     3301 cgggagagaa aactgtcctg attgaggctg gcatcggtaa caagctcccg gagaagaccc
     3361 gcagcttttt ctacccggaa atgaagctgc tggaaaatct tcaatcggcc ggcatcgatc
     3421 cggaaaaaat cgacgtggtc atcaactctc atctccactt cgaccactgc ggctgggaca
     3481 ccatatataa ggatggcgc
//
LOCUS       DASQYP010000198         4507 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_240365, whole genome shotgun sequence.
ACCESSION   DASQYP010000198 DASQYP010000000
VERSION     DASQYP010000198.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 4507)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4507)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4507
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_240365"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2406
                     /locus_tag="VE783_06340"
     CDS             <1..2406
                     /locus_tag="VE783_06340"
                     /EC_number="3.1.6.-"
                     /inference="COORDINATES: protein motif:HMM:NF013080.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008484 - sulfuric ester hydrolase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="arylsulfatase"
                     /protein_id="HYX53051.1"
                     /translation="GYGAPSTFGGVVPTPAMDRLARTGLRYTNFHSTSLSSPSRAALI
                     TGRNHHVSGFGVVGEIATGFPGYDSVIRKENGTIGEILKQNGYATSWFGKDHNTPFYQ
                     STQAGPFEQWPNGMGFEYFYGFVGGDASQWQPNLYRNTTAIYPFEGKPGWNLTTAMAD
                     EAIEYMKQVKQIAPEKPFLVYYVPGGTHAPHHPTPEWIKKISDMHLFDGGWNKIRETI
                     FANQKRLGIMPENATLTAWPKELPQWDSLSWKEKKLFIRQADVFGAYLAYTDNEIGRV
                     IQAVEDLGQLDNTLIIYIAGDNGASPEGMLNGTPNEFTTFNGIPVPVDAQLLWYDAWG
                     SDATFPHYAAPWAWAMDTPFKWTKQVASHYGGTTQGMVISWPGHINDAGGIRRQFHHL
                     IDIVPTILEASGIPQPDSINGIKQRPMDGVSMAYTWDKANAGAPSHRATQYFEMLGNR
                     AIYYEGWVAATTPATLPWELSTAKPPDVITGYKWELYNVNQDPTQSEDLAATMPEKLK
                     QMQDIFYAEAKKHDVLPLDNSSLTRWNAPKPNLTGGRTVFTYTSKLVGVPNSGAPSIL
                     NKSYTITAEVTVPEGGAEGVIVTDGGRFGGYALLLSQSYNWWLRSTPLKITVWSLFAL
                     GLLIVFLVRNSRGAIWRKLGYALVLIAPIWLFAGFITYVTHAGKSKPVFVYNLLNLKR
                     TVWEGPSLSAGKHTIVFEFKSDGPGLGKGGTGFLTVDGKEVAKNYMEHTTPVTFPEDE
                     TFDIGQDTRTGVALLRHRYDAPFSFTGSIQKLTFNLGEAQLTEEEQKQLPAIADAIAQ
                     AKD"
     gene            2460..3914
                     /locus_tag="VE783_06345"
     CDS             2460..3914
                     /locus_tag="VE783_06345"
                     /inference="COORDINATES: protein motif:HMM:NF018561.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1254 domain-containing protein"
                     /protein_id="HYX53052.1"
                     /translation="MATATVRPAPAVSTPKKTGRRSLLIFALIIAALALGWIFGGAGK
                     VKQEVAYVAGLEEYVFGYPLVMMDVTREVLTAAPTSGEYSAPINQFARLRSYVNPDFK
                     NVVRISVNSLWSHGWLDLDQEPMIVSVPDMDGHYVVIQALNMWTDDFMSVGTRTNGGK
                     AGNYLIAGPKWNGTPPKDVDQVFRCTTRYAWVLVQMSAASPADFPAIHAKQDQLKITP
                     LSAWGTAYTPPQTVPVDPNADTTATPFDQVSLMSGQMFFSRLAKVLAENPPYPADKDK
                     IEMLKKLGVEAGKPFNASSINPDVLKGINAVPYEVNKLFEAGPFTMKTVNGWINMLNI
                     GAYGTDYQTRAYVAYMGLGALAREDAVYPTAFVDSTGAALDGSNKYVMHFEKDGVPPS
                     KVKVWSVSPYRGNFYVRNSLNRYGILSGMPLKYNADGSLDIYMQKDSPGADKESNWLP
                     IPPSGMFNLTVRSYQPGEALLDGSYKLPPVTRVQ"
     gene            3959..4309
                     /locus_tag="VE783_06350"
     CDS             3959..4309
                     /locus_tag="VE783_06350"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53053.1"
                     /translation="MKTLLRIAAAGEFATGLLLLAYPPLVISLLFAAEISGAGISISR
                     IAGIALMALAVACWPNGNTDRAFAGMVTYGVLATVYMIVVGATGMHGPLLWPAVLAHA
                     ALSVLLIRARSASR"
     gene            complement(4378..4474)
                     /locus_tag="VE783_06355"
     tRNA            complement(4378..4474)
                     /locus_tag="VE783_06355"
                     /product="tRNA-Sec"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(4438..4440),aa:Sec,seq:tca)
BASE COUNT         1019 a         1287 c         1271 g          930 t
ORIGIN      
        1 gggtatggcg ctccgagcac gttcggcgga gtggtcccta cgccggcaat ggaccgcctt
       61 gccagaactg gcttgcgtta taccaacttt cattccacgt cgctctcttc tccatcgcgc
      121 gcagctttga ttaccgggcg caaccaccac gtatccggct tcggagtggt gggtgaaatc
      181 gcgaccggat tcccgggtta cgattccgtc attcgcaagg agaacggcac catcggcgaa
      241 atcctgaaac agaatgggta cgcgacctcg tggttcggca aggaccacaa cactccgttt
      301 taccagtcaa cccaggccgg gccttttgaa cagtggccga acgggatggg cttcgaatat
      361 ttttacggct ttgtcggtgg tgacgccagc cagtggcagc ccaatctcta tcgcaacacc
      421 actgccatct atccttttga aggtaagcct ggctggaacc tgaccactgc gatggccgac
      481 gaagccatcg agtacatgaa acaggtcaag cagatcgcgc cggaaaagcc tttcctcgtc
      541 tactacgttc cgggcggcac gcatgcgccg caccatccca cgccggagtg gatcaagaag
      601 atcagtgaca tgcatctttt tgacggtggt tggaacaaaa tacgggaaac tatcttcgcc
      661 aatcagaagc gtttgggcat catgccggaa aatgccacgc tcacggcatg gccaaaagaa
      721 ttgccgcaat gggattcgct gagctggaaa gaaaagaaac tcttcatccg gcaggccgac
      781 gttttcggcg cgtacctcgc ttacacggac aatgaaatcg gccgggtcat ccaggcggtg
      841 gaggatcttg gccagcttga taacacgctg attatctata ttgcgggcga caatggcgcc
      901 agcccagaag gcatgctcaa cggcacgcca aacgagttca ccacattcaa cggtattcca
      961 gtgcctgtgg atgcccagct tctgtggtac gacgcgtggg gatccgacgc aaccttcccg
     1021 cattatgccg caccgtgggc ctgggccatg gacactccgt tcaagtggac taagcaggtg
     1081 gcctcacatt atggcggtac cactcaggga atggtcatct cgtggcccgg tcacatcaat
     1141 gatgccgggg gcatacgccg ccagttccac cacttgattg atattgttcc caccatcctg
     1201 gaagcgagcg gcattccgca acccgattcc atcaacggaa tcaagcagag gccaatggat
     1261 ggagtgagca tggcctatac ctgggacaaa gcgaatgccg gcgccccctc gcatcgtgcc
     1321 acccagtatt ttgagatgct cggcaaccgc gccatctatt acgaaggttg ggttgccgct
     1381 accactccgg caacactccc ctgggagttg agcacggcga agccgcctga tgtgatcacc
     1441 ggctacaagt gggagcttta caacgtcaac caggatccca cgcaatctga agatcttgcc
     1501 gccacaatgc cggagaaact caagcagatg caggacatct tctacgccga ggcgaagaag
     1561 cacgacgttc tgccgctcga caactcgtcc ctgacccgct ggaacgctcc taagccgaac
     1621 ctcaccggag gtcgcacagt gttcacttac acgagcaaac ttgttggcgt cccgaacagt
     1681 ggcgctccca gcatcctgaa caagtcatac acgattactg ccgaagtcac ggttccagaa
     1741 ggtggcgcgg aaggtgtcat cgtgactgac ggcggccgct tcggcggcta cgctctcctt
     1801 ctgagccaaa gctacaactg gtggctcaga agtacgccgc tcaaaatcac cgtctggagc
     1861 ctctttgcgc tcgggcttct tattgtcttt cttgtcagga acagccgtgg cgcaatctgg
     1921 agaaaactgg gttatgccct ggtgctcatc gctcccatct ggttgtttgc gggattcatt
     1981 acctacgtga cccacgcagg caagagcaag ccggtgttcg tctataacct gctcaacttg
     2041 aagcggactg tctgggaagg ccccagtctg agcgccggca agcacaccat tgtttttgaa
     2101 ttcaagtccg atggtccggg cttgggcaag ggtggcaccg gcttcctcac tgtggatggg
     2161 aaagaagtcg ccaaaaacta catggaacac acaacgccgg tcacgttccc tgaggacgag
     2221 accttcgata tcggtcagga cacgcgtacc ggagttgctt tgctgaggca tcgctatgac
     2281 gcgcccttca gcttcaccgg ttccatccag aagctcacct tcaatcttgg agaggcgcag
     2341 ttgaccgaag aggagcaaaa gcaacttccg gcaatcgcgg acgcgatcgc gcaggcaaaa
     2401 gactgaaggc aagcgatcat ccggaagcag gatcaaaacc gcccggaagg agatttttta
     2461 tggcaaccgc aactgtacgt ccagctccag ctgtttcgac accgaaaaaa acggggcgca
     2521 ggtcgcttct catcttcgcg cttatcattg cggccctggc gctcgggtgg atatttggcg
     2581 gcgcaggcaa ggtaaagcaa gaggtcgcat atgtcgccgg acttgaggag tacgtttttg
     2641 gctacccact ggtcatgatg gatgtgacac gggaggtgct caccgccgcc cccaccagcg
     2701 gagaatacag cgcccccatc aaccagtttg cccggcttcg cagctatgtg aatcctgatt
     2761 ttaagaacgt ggtgcgaatc agcgtcaact ccctctggtc gcacggctgg cttgatcttg
     2821 atcaggagcc gatgatcgtc tccgttcctg acatggatgg tcactacgtg gtgattcagg
     2881 cgttaaacat gtggactgac gatttcatgt cagttggcac gcgtaccaac gggggaaaag
     2941 cgggcaacta cctgattgca gggccgaagt ggaacggcac gcctcccaaa gacgtggacc
     3001 aggttttcag gtgcacaacg cggtacgcat gggtgctggt gcagatgtcg gcggccagcc
     3061 ctgcggattt tccggcaatc catgccaaac aggaccagtt gaagatcact cccttaagcg
     3121 cttggggaac ggcgtatact ccgccgcaaa ccgttcctgt agacccgaac gccgatacca
     3181 cagccacgcc gttcgatcag gtcagcctga tgtcgggcca gatgttcttc agccggctgg
     3241 ccaaagtgct ggccgagaat ccgccctatc ccgcagacaa agacaaaatc gaaatgctga
     3301 aaaagctcgg cgtagaggcg ggcaagccct tcaatgcctc aagtatcaat ccagacgttc
     3361 tgaagggtat taacgccgtg ccgtatgagg tcaacaagct gtttgaggcg ggccctttca
     3421 ccatgaaaac cgtaaacggc tggatcaaca tgcttaacat cggagcctat ggaaccgatt
     3481 accagacgcg ggcttatgtg gcttacatgg ggctgggagc tttagccagg gaagacgcgg
     3541 tctacccaac cgccttcgtg gattccactg gcgcggcgct ggacggaagc aacaagtacg
     3601 tgatgcactt tgaaaaagat ggcgtgccgc cctcgaaggt caaggtgtgg tcagtttctc
     3661 cctatcgcgg caacttctac gtcaggaatt cgttaaaccg gtacggaatt ttgtccggca
     3721 tgccgctgaa gtataacgcc gatggttctc tggacattta tatgcagaaa gattccccag
     3781 gcgcggacaa ggaatccaac tggcttccga ttccgccatc gggaatgttc aacctgactg
     3841 tgcgctctta ccagcccggc gaggcgttgc tggacggcag ctacaagctt ccgccggtga
     3901 ccagagtgca atgaagccac ggacaagagt gcaatgaagt cggggatgag agcttgcaat
     3961 gaagaccttg ctcagaatag ctgccgccgg tgagtttgcc accggcctgc ttctgctggc
     4021 atatccgccc ctggtgatca gcctgctctt cgcagccgag ataagcggag cgggaatatc
     4081 catcagccga atcgccggga ttgccctgat ggcgctggcg gtagcttgct ggccgaatgg
     4141 aaacactgac cgtgcattcg ccggcatggt gacctatggc gtgctcgcca cggtatatat
     4201 gatcgtggtg ggcgcaaccg gcatgcacgg accgcttttg tggccggcgg ttctggcgca
     4261 tgccgcgctc tcggtgttgc tgatacgtgc acgatcggca tcccgctgaa cgcctgatct
     4321 gcgctcatct gcgttaatct gcggcgaatt cctgttcctt tgtggtgagg agaagagtgg
     4381 cggaagcgtg tgagagtcga actcaccaga gccagcgaag ctaactctcg ccggttttga
     4441 agaccggaag ggtcaccgga ccccatgcgc ttccgcttcc aatcagttta cacaagccca
     4501 aggagtt
//
LOCUS       DASQYP010000199        15589 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_240408, whole genome shotgun sequence.
ACCESSION   DASQYP010000199 DASQYP010000000
VERSION     DASQYP010000199.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 15589)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15589)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15589
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_240408"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..626
                     /gene="def"
                     /locus_tag="VE783_06360"
     CDS             <1..626
                     /gene="def"
                     /locus_tag="VE783_06360"
                     /EC_number="3.5.1.88"
                     /inference="COORDINATES: protein motif:HMM:NF001159.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042586 - peptide deformylase activity
                     [Evidence IEA];
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="peptide deformylase"
                     /protein_id="HYX53054.1"
                     /translation="MAAFHEECALILPIVQVGEPVLRQQARPLRPNEIRSREIRELIA
                     DMKETMYGAPGVGLAAPQIGRNLQLAVIEDRSEYTKDWTPEQLAERERTAIPFHVIIN
                     PRLTLIGDEKVEFFEGCLSLNGLLGLVPRARSVRVECLDEMGGPRVIEAAGWYARILQ
                     HEIDHLGGTVYVDRMYPRTLMTVENYKQHWLEKSLEQIKEEIAVERR"
     gene            complement(712..1644)
                     /locus_tag="VE783_06365"
     CDS             complement(712..1644)
                     /locus_tag="VE783_06365"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53055.1"
                     /translation="MAILTAGATLIIVSSVIRGNVNDDTESSIAKELWAKACGGIGEA
                     LAIAAVIAYLVDEAAKRRLLREFAEDISEHIIGRLLPSGLRERMFEYLSVDFVRTGWT
                     VIYQLKVRQQQAVNGKLAPHVELLTWSNFTMENRSPLTKSYTVAYEVVKKWFEELPPP
                     RIVSVLVNGERVNGCRLKDSSGGFVKLNPDEAPDLIVDMPGYRASQTEPHKAEIRLIL
                     AENLGETFYTSFDALHPVVGPTFVAAKYDPRQLEVSLSLSFADDSEAEPIAPLPGEKD
                     RWKIEKPILPGQGFVLRWRPRPAAQATAAAAAKR"
     gene            complement(1928..2854)
                     /locus_tag="VE783_06370"
     CDS             complement(1928..2854)
                     /locus_tag="VE783_06370"
                     /inference="COORDINATES: protein motif:HMM:NF013033.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004800 - thyroxine 5'-deiodinase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="deiodinase-like protein"
                     /protein_id="HYX53056.1"
                     /translation="MLGFSTYNYEHFSRELLHGLSRAPFSGPEPGDHAPDFKGATLDG
                     ETLRLSDYQGKKNVLLIFGSATCPMTAGSISGINELYDHFRGDDIEFLFVYVREAHPG
                     EIIPAHRNLREKTEAARLLRDEEEMEMPIIVDDLRGSIHRKYSRLPNPAFLVDRSGRV
                     AFRSMWTKPDQLESAIEELLERQGERNVDHVVVNGGQDLSTPMSYGVLYSYRALERGG
                     SESLRDFRDALGFPARMAMSASRIAKPLIENPGRILAWSALTAAVLAGGLYAGFELRK
                     RRLGTQPNPYRAYEKPRVRDTETGTDYGAVGI"
     gene            3064..3543
                     /locus_tag="VE783_06375"
                     /pseudo
     CDS             3064..3543
                     /locus_tag="VE783_06375"
                     /inference="COORDINATES: protein motif:HMM:NF012787.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0016209 - antioxidant activity [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="redoxin domain-containing protein"
     gene            complement(3594..4250)
                     /locus_tag="VE783_06380"
     CDS             complement(3594..4250)
                     /locus_tag="VE783_06380"
                     /inference="COORDINATES: protein motif:HMM:NF024853.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin domain-containing protein"
                     /protein_id="HYX53057.1"
                     /translation="MKQIAAFVAAVMIFAALSGPAHAADASSLKPPPGARVAVVVFED
                     LECPDCARAYPPVWEVAKAHKVPVVLHDFPLPRHPWSFDAAVWARYFDTKDTKTQQVG
                     NDFRGYIYSNQPQITRENLNQFVQKFGDEHNLPVPAEKDPDGNLSAKVKEDYALGQRI
                     GLEHTPTIFVVGNGGASTPFVEVVDRDKLSQIIEDMLKKAGPPTPGKKTVQKTSKRKS
                     "
     gene            complement(4301..4951)
                     /locus_tag="VE783_06385"
     CDS             complement(4301..4951)
                     /locus_tag="VE783_06385"
                     /inference="COORDINATES: protein motif:HMM:NF024853.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin domain-containing protein"
                     /protein_id="HYX53058.1"
                     /translation="MKQIAGAAFALIMFFALGRPALAADGSKLTLPSGVKVAVVVFED
                     LECPDCARAYPVVWEAANAHKVPVELHDFPLSMHPWSFKAAVNARYFDTKSTKIGDDY
                     RGFIYKNQPQITAGNLQAYTQKFADDNKVPLPFAIDPEGKLTQLVRSDYDLGTQCSLQ
                     HTPTIFVVGQGKNGIQWEEVNDRALLPQMIEDMQKKVAAAAPAAKPAAQRAHKKKS"
     gene            complement(5091..5816)
                     /locus_tag="VE783_06390"
     CDS             complement(5091..5816)
                     /locus_tag="VE783_06390"
                     /EC_number="3.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013672.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide deacetylase family protein"
                     /protein_id="HYX53059.1"
                     /translation="MLFPIALAGAAAAAYAGYATMAPESQLYGQTLFRGSDPRQMALT
                     YDDGPNDPHTLRLLEVLAKFEARATFFLIGQYVRRRPDIVREIQAAGHVIGNHTDTHP
                     NLIFVSASGLRQELESCRKSLEDAVGQPAPLFRPPFGGRRPNVLRAARSMGLQPVMWS
                     VTAFDWSAKSSAAIVQKVTSQVDGRRTPQGEVILLHDGGHLAFGTDRAFTVEATQVLL
                     QKYSQEGKRFVSVTDLASAAVTA"
     gene            5941..6606
                     /locus_tag="VE783_06395"
     CDS             5941..6606
                     /locus_tag="VE783_06395"
                     /EC_number="2.7.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF013843.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0019136 - deoxynucleoside kinase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="deoxynucleoside kinase"
                     /protein_id="HYX53060.1"
                     /translation="MAKLFEPPRYIAIEGPLRVGKSTLANIIADRLNAQRVIEPEDNP
                     FLREFYQGERGAGFQTQFAFMIRRFEQLSRLEVGPNSHKAVVADYIFEKDKLFAYINL
                     TDGELEIYNRYYQHFHAQLPVPDLVIYLQASPEVLRKRLRKKNMASETSVSDDYLGEV
                     VKAYEHFFFHYTSSDLLVVNTNEIDFVERHADLQELLRRVSEPIRGTQYFLPLGSEGA
                     AGA"
     gene            6901..8931
                     /locus_tag="VE783_06400"
     CDS             6901..8931
                     /locus_tag="VE783_06400"
                     /inference="COORDINATES: protein motif:HMM:NF024371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3857 domain-containing protein"
                     /protein_id="HYX53061.1"
                     /translation="MRTALRLSLCCLLFTLAAFGQKQDWLPITQQDLQYKEVPGNKGA
                     SAVRLYYAQYLDDNTSTCFIYQRIKILNEKALNPDSRGKTYADVEIPILTITGIVEDI
                     ADLKARTIKPDGSILDFTGKPYEKVIFKGRGDKLSVKAFSMPEVSVGSIIEYKYTAKV
                     SVPSNGFVKVFARDSWDIQDELFTVKESLFYRPFGGTDFQSASRPQFYFDGARVSHVT
                     MNLKEKPQDRGNDSVLELTNVPAFEREEFMPPENNYKPSVIFFYGRRGNPSVDKEWQE
                     IGKERYEELERFLAGSRGVKEAAMQAMGSETDPGLKLRKLYERAQSIRNLTYERERTA
                     EERKAEHIQRNVDVGDVLAHGYGSRLDITLLFVAMARSAGFDASVVQVANRRNRFFVK
                     DWTSIRQLDAVMAVVTLPTGDVYLEPGIRFCPYGQVRWIHTAIEGLRIDKKGGTFVKA
                     PPVSYDKSVTRRTADLSLSEDGTLKGSVLLEFTGAEALEHRLDAIESDEAGRKKDMED
                     ELKQWLPAGAIVKMQASDGWEGAEQPLVARFDVELPNYASLAGKRFLVPSYLFQLKQN
                     EAFSHSQRKYPVYLPYAFTDFDNVTIKVPAGFTTESIPAPQQAKLPYAKYQMTTRFEN
                     GELVSQRALFFNGIFFPLEKYSELQGFFGTVRTGDEQQAVLHGGSVSAQKGN"
     gene            8912..10876
                     /locus_tag="VE783_06405"
     CDS             8912..10876
                     /locus_tag="VE783_06405"
                     /inference="COORDINATES: protein motif:HMM:NF024371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3857 and transglutaminase domain-containing
                     protein"
                     /protein_id="HYX53062.1"
                     /translation="MLRKAIKATFLLAVLAVFSSLAQAEVPDWVRSLARQKAKTYADD
                     VNAVVLLDDHVTYVKDNGDLVKRGRHVVRILRPEGRQESAVFTVHYNGDSKVNYLRGW
                     SITEKGQEYESKSGDVAELGVSSYEVYSDAKVKALRISGADVGTVVAFEYEQQAHPYV
                     FQDSWQFQRSEPVEQSHYELHLASGWRFQSAWTNHKEEKPTEANGALEWTLSDVPRIE
                     NEPQRPPAQGLEGGVIFTFFNEKMPAKSYRNWSEFGSWYTQLAASMREPSPSLTQKVQ
                     ELAPASLPLMQRIRALASFAQHDVRYVAIEVGVGGYRPHSASDIFNHRYGDCKDKATV
                     LSAMLAQIGVKSYYVIVNASRGIVTKNSPPNIGGFNHMILAIALPDASYSKPLPALYN
                     HPQLGRLLIFDPTNEFVPFGEIPHYEQDNYGLLVGEQGGDLIHLPLSTPESNGVTRTA
                     KLKLLPDGTLQGQIEEKYTGYNAMLGRMFLQRETETDRRKFIERLAGRSLGAFQLDNY
                     ELLNDSDIDQDLIIRYTFSAPHYAKNAGAMLLVRPRVLGEMAGQWDANKPRHYAYEFR
                     APFLNRENVEITLPDGFKVDELPDPIKASFQFAEYASKTENSGNVLKYSREYRQLATE
                     VPLDQMDQLKKLFGEINLDEKNMAVLKKTN"
     gene            complement(11001..11405)
                     /locus_tag="VE783_06410"
     CDS             complement(11001..11405)
                     /locus_tag="VE783_06410"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53063.1"
                     /translation="MERRPLPVSLIAGYFWVFSGVLLAILLWQVAAHRIHGGFAETAI
                     VLSGCFLLALLPGVLGVGLWLLDNAARVAAVMFALLHAISEIAFLSSVHVPPRTFTWF
                     RIFLDGAIILCLVHPGIRGAFRWKPVELSIPK"
     gene            complement(11578..13290)
                     /locus_tag="VE783_06415"
     CDS             complement(11578..13290)
                     /locus_tag="VE783_06415"
                     /inference="COORDINATES: protein motif:HMM:NF012711.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HYX53064.1"
                     /translation="MSSPAETAISTTQMFREARDFLLKHREDYQTAYEGFQWPKLDRF
                     NWALDWFDAVARGERGNQTALWVAYEDGRETKLSFAELSERSNRIANYLRELGVRRGD
                     RVLLMLGNVPQLWETMLAVMKLGGVIIPATTLLTADDLSDRIGRGRVRHVVCAVELAP
                     KLAGVAKDCTRISVGGAAPGWNEFEAGYASSPVFQPDGETMANDPMQLYFTSGTTSKP
                     KLVLHSHTSYPVGHLSTMYWIGLKPGDVHCNLSSPGWAKHAWSCFFAPWNAEATVFVL
                     NQSRFNARNLLDTLTGCGVTTFCAPPTVWRMLVTENLSSWKVRLREVASAGEPLNPEV
                     IEQVRAAWGLTIRDGYGQTETTAQVGNPPGQKLKVGSMGRPLPGYRVRLINAEGKDAE
                     EGELCLRLDPRSMGLMPGYQGDDGNVQPIAGEFYRTGDVVQRDGEGYLTFVGRADDVF
                     KASDYRISPFEVESALIEHPDVVECAVVPSPDPIRMAVVKAFVTLRTGTQPSRELALS
                     IFQHSRKVLAPYKRVRRLEFVDLPKTISGKIRRVQLRTAEAERPTLEKPATEFREEDF
                     PELG"
     gene            complement(13479..15521)
                     /gene="ligA"
                     /locus_tag="VE783_06420"
     CDS             complement(13479..15521)
                     /gene="ligA"
                     /locus_tag="VE783_06420"
                     /EC_number="6.5.1.2"
                     /inference="COORDINATES: protein motif:HMM:NF005932.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003911 - DNA ligase (NAD+) activity
                     [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent DNA ligase LigA"
                     /protein_id="HYX53065.1"
                     /translation="MPTAAKDRDKGVEQKIQKLRSEIRRHEHLYYVLDAPELSDADFD
                     RLMQELKKLEAAHPELITRDSPTQRVGGKPREGFVKVEHSRPMLSLDNAYNEEELRDW
                     DRRVHELAGSEKLDYVAELKMDGMSLALTYREGHLQSGVTRGDGSIGEDVTTNVRTIR
                     SVPLSINPATLQKAGIPEDFEVRGEVIMPMAGFERMNEDREAQGLSKFANPRNAAAGT
                     IRVLEPNIVAQRRLDFYAYFLLVNGRYFPDKQSEALKALQTAGFKVNPQHVLAHDIDD
                     LLKFIAKGEAAREKLPYEIDGVVIKVNSMRTQDRLGFTGKAPRWAIAYKYAARSGVTR
                     VEDILVQVGRTGKLTPVAALKPVSIGGTTVSRATLHNMDEIERLGVKIGDWVMVERGG
                     DVIPKVVQVIEDKDHPRGHKTFQMPERCPECGGHVVRVEGEADHRCVNSACPAKLRET
                     ILHFAARSVMNIEGMGESLVNQLCDRGLVKDIADIYELNKEKLLSLERIGEKSAQNLL
                     DEIEQSRSMPLERVIFALGIRFVGERTAQFLAEHFGSMDALMNASVEELQQVNEVGPR
                     IGASIHEFFAEPRNRKLVERLRKYLQFTGKKRERGTALAGKTFVITGTLASYSRDDAK
                     RLIEDAGGKVSGSVSKKTDYVVAGDDPGSKLDKARELGVAVIGEKEMEALAGKNIR"
BASE COUNT         3369 a         4579 c         4268 g         3373 t
ORIGIN      
        1 aaatggctgc ttttcacgag gagtgcgcat tgattcttcc cattgtgcaa gttggcgaac
       61 cggtgctgcg gcagcaggcg cggccgttgc gccccaatga aattcgcagc cgcgaaatcc
      121 gcgagctgat cgccgacatg aaagagacca tgtatggcgc tccgggcgtg gggctggcag
      181 ccccccagat cggccgcaac cttcagcttg cggtaataga ggaccgcagc gagtacacca
      241 aagactggac tccggagcag ctcgccgaac gcgagcggac agctattccg ttccacgtaa
      301 tcatcaatcc caggctcact ctgattggcg atgagaaggt ggaatttttt gaaggctgcc
      361 tcagcctcaa cgggcttcta gggctggtgc cgcgtgcgcg gagcgtgcgc gtggaatgtc
      421 tggatgaaat gggagggccg cgtgtgattg aagccgcggg ctggtatgcg cgcatcctcc
      481 agcatgagat cgatcatctg ggcggaacgg tttatgtgga ccgcatgtac ccccgtacgc
      541 tcatgacggt ggaaaactac aagcagcact ggctggagaa gagcttggag cagatcaagg
      601 aagagatcgc cgtagagcgc cgttgacgat ttttgggagc tttagtccgc agaatgaaaa
      661 agttttatgg ccacgttgaa tggaaaagca atgaaatctc cacgccctcg ttcagcgttt
      721 tgcggctgca gctgccgtgg cctgggccgc cggccggggc ctccatcgca atacaaaccc
      781 ttgcccaggt aggatcggtt tttcgatttt ccacctgtcc ttttctcctg gcaacggggc
      841 gataggctca gcctcgctgt catcggcaaa tgagagtgag agtgaaacct ctagttgccg
      901 gggatcgtac ttcgcggcca caaaggttgg cccaaccacg ggatgaaggg cgtcaaatga
      961 ggtgtagaaa gtctctccca gattttccgc cagaatcaac ctgatctctg ccttgtgagg
     1021 ctccgtctga gaggcccggt agcccggcat gtcgacgatc aggtccggcg cctcgtcagg
     1081 attgagcttt acaaatccgc cgctactatc cttcaggcgg cagccattta cacgttcgcc
     1141 gttcaccagc acgcttacta tgcgcggcgg gggcagctcc tcaaaccatt ttttcaccac
     1201 ctcataggcc accgtgtagc tctttgtgag cggcgaacgg ttctccatgg tgaagttgga
     1261 ccaggtcagc agttcgacat gtggcgccag cttgccgttc accgcctgct gttgtcgcac
     1321 ttttaactga tatataaccg tccatccggt gcgtacaaag tcaaccgaca gatactcgaa
     1381 cattctctcc ctgagccctg acgggagcag ccgtccgatg atgtgctcag agatatcttc
     1441 tgcgaattcc ctcagcaatc tgcgtttggc ggcttcatcc accagatacg cgatgactgc
     1501 ggcaatcgcc aacgcctctc ctatgccgcc gcaggccttg gcccacaatt cttttgctat
     1561 tgaagactct gtgtcatcgt tgacgtttcc cctgatgacg cttgacacga tgatgagggt
     1621 cgccccggcc gtgagtatgg ccacccatct caaccgaaat ctcgtcttct ccgatttaag
     1681 aaagttgcca atccacttgc gcatccgtct cacccaaatt gcctttgatg gccctgcatt
     1741 ctatcccagg ccgcacagac ggagagtgct ttagtatcgg caaaaaggat atttttatca
     1801 gtcgttaagc ctgggcgcga gtggaagagg agctaagggc gggatctcag taatgggcca
     1861 gccatccgaa aacgagaaga actcttcaac cgctaacgcg cggagtcggg agtaactgcg
     1921 ttttttacta gatccccaca gcgccgtaat cggttccagt ttccgtgtcg cgcacgcggg
     1981 gcttctcgta ggctcgatac gggttcggct gggtgccgag gcgtcgtttg cgcaattcga
     2041 agccggcgta cagaccgccg gcgagcaccg cagccgtaag cgcgctccag gccagaatgc
     2101 ggccgggatt ttcgatcagt ggtttcgcaa ttcgtgaagc tgacatagcc attctcgcgg
     2161 gaaatcccag cgcatcgcgg aagtcgcgga gtgactcgct gccgccgcgc tccagggccc
     2221 gataagaata gagtactcca tatgacatgg gagtggagag gtcctggccg ccattcacta
     2281 ccacatggtc gacatttcgc tcgccttgcc gctccagcag ttcttcaatg gcagattcga
     2341 gttgatcggg cttcgtccac atggaacgaa aggccacgcg tccggaacgg tcaaccagaa
     2401 aggcggggtt gggcagccgg gaatacttgc ggtggatgga gccgcgcaga tcatccacaa
     2461 tgatcggcat ctccatctct tcttcatcgc gcagaagtcg cgccgcttcc gtcttttccc
     2521 gcagattgcg gtgtgcagga ataatctcgc cgggatgggc ttcgcggaca tagacgaaca
     2581 ggaactcgat atcgtccccg cggaaatggt cgtagagctc attgattcca ctgatggaac
     2641 ccgccgtcat ggggcaggtg gcggagccaa agatgagcag gacattcttt ttgccctgat
     2701 aatcgctcag gcgaagtgtc tcgccgtcca gcgtggcgcc cttgaaatcc ggggcgtggt
     2761 cgcccggctc gggaccggaa aatggggccc gggacaatcc gtgcagaagc tcgcgggaaa
     2821 agtgctcgta attgtaagtg ctgaagccca gcatgctgct ccttgaatgc caaaaaacgc
     2881 gccgaactga caggcccgaa ctccaagatt cagatgcccg ctgcgctgcc tccgttttct
     2941 aaagctaaac tgtcttaatt tttttgacca cgataaaatt gttggtttgt acccgggcgg
     3001 tcatggctgc ccggcagcac ccggcgttgt tccaaaatcg tagtggagga ttggatggcg
     3061 gcattgaagg ctggtgacgt tgccccggat tttgagctcc ctgcctgttt aggcaagcag
     3121 agacagaaat tcaagctcag cgatttccgc ggcaaaaaga acgtggtggt ggcgttttat
     3181 cccctggact ggagtcccac ctgaaccaac gaaatgtcgg cgtatggcag atatctggcc
     3241 aaattcgccg acctcgatgc ccaggtcgtg ggcgtgagtc cggattccat ttacagccac
     3301 ctggcgtggc aggaaaaatc aattggctgg caggaatatc ccctggccag cgattactgg
     3361 ccgcacggcg gcaccgcggt gaaattcggc attctgcggg aaggcgagcc cttgccgggg
     3421 attaatgaac gcgcaatctt catcctggat aaacagggaa ccatccgctt ctcccggatt
     3481 tacgaactgg ggcaggaacc ggattacgaa cagattgtga ctgaactgga aaagctgaaa
     3541 taaagcaaac cggcacggtg caggaccgtg ccggacttct catctgcaaa ctctcagctt
     3601 tttctcttgc ttgtcttttg gacggtcttt tttcccggcg tgggagggcc cgccttcttc
     3661 agcatgtctt cgatgatctg agacagctta tcgcggtcca ccacttcaac gaaaggcgtg
     3721 gaagctccac cgttcccgac cacaaagata gtcggcgtgt gctccagccc gatgcgctgg
     3781 ccgagagcgt agtcttcctt caccttggcg gacaggtttc cgtcgggatc tttttcggcc
     3841 ggcacaggta aattgtgttc gtcaccgaac ttctgcacaa attgattgag attttcccgc
     3901 gtaatctgcg gctggttgga atagatgtac ccgcgaaaat cgttcccgac ctgttgcgtc
     3961 ttcgtgtctt tggtatcgaa gtagcgcgcc cacacagccg cgtcaaaaga ccatggatgg
     4021 cgcggcaacg gaaaatcgtg caacaccaca ggaaccttat gcgccttcgc cacttcccac
     4081 accggcggat aagcacgcgc gcaatccggg cattcaaggt cttcaaagac cacaactgcc
     4141 accctcgctc cgggcggcgg cttcagggaa gatgcatcgg cggcgtgtgc gggaccgctt
     4201 agcgccgcaa aaatcatcac cgccgccacg aatgccgcga tttgcttcat cagtgaagtc
     4261 tccgccgtac cgttcacatg ctcccggcct ggatatagct ctagctcttc tttttgtgcg
     4321 cgcgctgagc ggctggtttg gctgccggag ccgctgccgc caccttcttc tgcatgtctt
     4381 caatcatctg cggcagcagg gcacggtcat tgacctcttc ccactggata ccgttcttcc
     4441 cctgcccaac cacgaaaatc gtgggcgtgt gttgcaggct gcactgggtg ccaaggtcgt
     4501 agtcgctgcg caccagctgc gtcagtttcc cttctggatc aatggcaaag ggcaacggaa
     4561 ccttattgtc gtcggcaaat ttttgggtgt atgcctgaag gttccctgcc gtgatctgcg
     4621 gctggttctt gtagatgaag cccctataat catcgccgat cttggtggat tttgtgtcaa
     4681 agtagcgcgc gttcaccgcg gccttgaacg accaggggtg cattgagagc ggaaaatcgt
     4741 gcagctccac cggaactttg tgcgcgttgg ctgcttccca aaccacagga taggcgcggg
     4801 cgcaatccgg acattccagg tcctcaaaaa ccacgaccgc cacttttact cccgatggga
     4861 gcgtgagctt tgagccgtca gcggcaaggg cgggtctgcc cagggcaaag aacataatca
     4921 gagcaaaggc tgctcctgct atctgcttca tcaaaatgga atctcctctg gccagccgtt
     4981 ctggcaacca ggcgcattag ctgtaaaacc cggtctgccg gcccaagttg ttaagccgtc
     5041 aaaatcccgc aaatgagcga gtgggacttc tttctatttt accgaatggg tcacgccgtc
     5101 acggcagccg aagccaagtc agtgacgctt acgaaacgct taccttcttg agagtacttc
     5161 tgcagcagca cttgcgttgc ctccacggtg aacgcgcggt ctgtaccgaa agcaagatgt
     5221 ccaccatcat gaagcagaat gacttcgccc tgcggggtgc ggcgtccatc tacctggctg
     5281 gttactttct gaacgatagc cgccgatgat tttgcgctcc agtcaaacgc cgtgaccgac
     5341 cacatgaccg gctgcagtcc catgcttcgc gccgcccgca gaacgttcgg tcgcctgccg
     5401 ccaaagggag gccggaacag cggtgcaggc tgcccaacgg catcttccag cgacttgcgg
     5461 cagctttcca actcctgccg taaaccgctg gcggatacga aaatcaagtt cggatgagtg
     5521 tccgtgtggt tcccgatcac gtgtcctgct gcctgaatct cgcgcacgat atccggccgg
     5581 cgacgaacat attgcccgat caggaagaaa gtcgcgcgcg cctcaaattt agccagaacc
     5641 tccaggagcc gtagcgtatg cggatcattg ggaccgtcgt cataggtcag cgccatctgc
     5701 cttgggtcgc tgccacggaa gagcgtttgg ccataaagct gcgactccgg cgccatggtg
     5761 gcgtaccctg cgtaagcagc cgctgccgcc ccggccaatg caattgggaa gagcatttcg
     5821 cctcagattc taaatgggtt gcggttagag tcgggcgggc cgccgcggtt tccacagctg
     5881 ttgtcatttt gttcaattgc cacgagcgcg ttccgcgata tattctcgcg aagtcatctc
     5941 atggccaagc tttttgaacc gccccgttac atcgccattg aaggcccgct gcgtgtgggc
     6001 aaaagcacgc tggccaacat cattgccgac cgcttgaacg cgcaacgcgt gattgaaccg
     6061 gaagacaacc cctttctgcg cgagttctac cagggcgagc gcggcgccgg atttcagaca
     6121 cagttcgcat tcatgatccg tcggtttgaa cagctcagcc ggctcgaagt gggaccgaac
     6181 tcgcacaagg cggtggtggc ggactacatc ttcgaaaaag acaagctctt cgcctacatc
     6241 aacctgaccg atggcgaact ggagatttac aaccgctact accagcactt ccacgcgcag
     6301 ttgccggttc ccgacctggt tatttatctt caggcctcgc cggaggtgct gaggaagcga
     6361 ttgagaaaaa agaacatggc cagcgaaacc tctgtgagcg atgattacct tggagaagtg
     6421 gtcaaggcat acgagcactt cttttttcat tacacctctt ctgacctgct cgtggtgaac
     6481 accaatgaga ttgactttgt ggagcgccac gccgatctgc aggagctgct gcgacgcgtg
     6541 agcgagccga tccgcggaac acaatacttc cttcccctgg gatctgaagg cgcagccggg
     6601 gcgtaaccag ttcagatcca gccttatacg agccagagaa ccggaagttt cccttcgact
     6661 ctccatcctt tctccgcgag gcgaatgctt gttaagtcgt tcatgatccc caggctcaaa
     6721 acacgaccgg gtaatggaga tgctggttca aaaagtagct agtacaccag tgttttccta
     6781 atagatttct aagcaagggt actctggcca aagctcctga attgttgtat atatcttcag
     6841 cttgttcatc ctgaaattct gcctacccct ttggcaatca tttcctggtt gaggtcacgt
     6901 atgagaacag ctctgcgact ttccctgtgt tgtttactgt ttaccctggc ggcatttggc
     6961 caaaaacagg attggctgcc cattacccag caggatcttc aatataagga ggttccaggg
     7021 aacaaaggcg cttccgcagt gcggctctac tacgcgcaat atctggatga caatacttcg
     7081 acctgcttca tctaccaacg catcaagata ctgaacgaga aagcgctcaa ccccgattct
     7141 cgaggcaaga cctacgccga tgtggagatc ccgattctga caattacagg tatcgtggag
     7201 gacatcgcgg acctaaaggc gaggaccatt aaacctgatg gctcgatcct ggacttcacg
     7261 ggtaaaccgt atgaaaaagt aatttttaaa gggcgcggcg ataagctttc tgttaaagcg
     7321 ttcagcatgc cggaagtaag cgttggcagc attattgaat acaagtacac cgcaaaagtt
     7381 tctgtcccat cgaacggctt cgtcaaggtg ttcgcccgtg attcctggga cattcaggac
     7441 gagctattca cggtgaagga aagtcttttc taccggccct ttggtggcac ggatttccag
     7501 agcgccagca ggcctcagtt ctacttcgac ggtgccagag tcagccatgt gactatgaac
     7561 ctcaaagaga agccgcagga tagaggcaac gactctgtcc tggaactgac caacgttcct
     7621 gcttttgagc gcgaagagtt catgccgccg gagaacaatt acaagccgag cgtgatcttc
     7681 ttctatggac gcagaggcaa tccttctgtg gataaggagt ggcaggaaat cggcaaagag
     7741 cgatatgagg aactcgaaag atttctcgcg ggaagcagag gcgtgaaaga agccgccatg
     7801 caggcgatgg gcagtgagac tgatcctggg ctcaagcttc ggaagttgta tgagcgggct
     7861 cagagcatac gcaatctcac ctacgaacgg gaacgcactg cggaagaacg caaggctgaa
     7921 cacatccaga ggaatgttga tgtcggtgac gtactggcgc atggttatgg aagccggctc
     7981 gacatcacgc tactgtttgt tgccatggcc cgctcggccg gttttgatgc atcggtggtt
     8041 caggttgcta accgcagaaa ccggttcttt gtgaaagact ggacttccat ccgtcaacta
     8101 gacgcggtga tggctgttgt tacccttccg acgggagacg tttaccttga accaggaata
     8161 cgcttctgtc cttacgggca ggttcgttgg attcacactg caatcgaggg tctcaggatt
     8221 gacaagaagg gtgggacctt tgttaaggcg cctcccgtga gctacgacaa gtcagtgacc
     8281 cgccgaacgg cagatttgtc actgagcgaa gacgggactc tgaagggcag tgttttgctg
     8341 gagtttacag gcgcggaagc gctggagcac cggcttgacg ctattgagag cgatgaggct
     8401 ggccgtaaaa aggacatgga agacgagctt aaacagtggt tgccggccgg cgccattgtg
     8461 aagatgcagg catcggatgg ctgggaaggc gcagaacagc cactggtggc ccgctttgac
     8521 gtcgagttgc ccaattatgc gagcctcgcc ggaaaacgtt ttcttgttcc cagctacctt
     8581 ttccaattga aacagaatga ggcgttttct cattcgcagc gtaaatatcc tgtgtacctg
     8641 ccctacgctt tcaccgattt tgataatgtc accatcaagg taccggcggg attcacaacg
     8701 gaaagcattc ccgcccccca gcaggcaaag cttccctatg ccaaatacca gatgaccacg
     8761 cgctttgaga atggtgaact cgtgtcccag cgcgcgctgt tcttcaacgg tatcttcttc
     8821 ccgcttgaga aatattcgga attgcagggc ttcttcggca ccgttcgcac cggtgacgaa
     8881 caacaggctg ttttgcatgg aggtagcgtc agtgctcaga aaggcaatta aagcaacttt
     8941 tctcctcgct gttcttgcgg ttttctcttc tctggcgcag gccgaagttc cggactgggt
     9001 gcgttcgctt gccagacaga aggcgaagac ctatgccgat gacgtaaatg cagtcgtatt
     9061 gctcgatgat catgtcactt acgtcaagga caacggcgac ctggtgaaac ggggccgcca
     9121 cgttgtgcga attctgcgtc ccgagggtag acaggaatct gccgttttta ccgtgcacta
     9181 taacggcgac tccaaagtga attacctgcg cgggtggagc atcacagaga agggccagga
     9241 gtacgaatca aaatccggcg acgttgccga actcggagtc agcagttacg aggtttattc
     9301 tgacgcaaaa gtaaaggccc tgcggatctc cggcgccgat gtgggtacgg tggtggcctt
     9361 cgaatatgag caacaggctc acccgtacgt ttttcaggac tcctggcaat ttcagcggag
     9421 cgagccagtg gagcagtcgc actatgagtt gcacctcgct tccggctggc gcttccagtc
     9481 agcatggacc aaccataaag aagaaaaacc cacggaagcg aatggcgctc tggaatggac
     9541 actctctgac gttccgcgta ttgaaaacga accacagcgt ccaccggcac agggcctgga
     9601 gggcggtgtg atattcacgt ttttcaacga gaagatgccg gcaaaaagtt accgcaactg
     9661 gtcagagttt ggctcatggt acacgcaatt ggcggccagt atgcgcgagc cgagcccctc
     9721 cctgacgcaa aaagtgcagg aactggctcc cgccagcctg cctctgatgc aacggatacg
     9781 ggctctggcg agttttgccc agcacgatgt ccgttacgtg gcaatcgaag tcggagtggg
     9841 cggctatcgt ccgcacagcg cgagcgatat cttcaatcat cgctatggcg attgcaaaga
     9901 caaggctacc gttctgagcg caatgcttgc gcagatcggg gtcaagtctt actacgtgat
     9961 cgtcaatgcc agccgcggaa tcgtgaccaa aaattcaccc ccgaacatcg gcggattcaa
    10021 tcacatgatt ctggcgattg cgcttccgga cgcaagttat tccaagccac tgcctgcact
    10081 ctataaccat ccgcagctcg gacgcctgct catctttgat ccgaccaacg aatttgttcc
    10141 ttttggcgaa attccccatt acgagcagga caattacggg ctcctggtgg gagaacaggg
    10201 cggagatctg atccacctac cgctcagtac tccggaatcg aatggagtca cgcgcactgc
    10261 caagctgaaa cttctgcccg atggcacgct gcagggccag attgaggaga agtacaccgg
    10321 ctacaacgcc atgctggggc ggatgttcct gcagcgtgaa acagaaaccg accgcaggaa
    10381 gttcattgag aggctggcag gaagatcgct gggcgcattc caactggata attacgaact
    10441 gctcaacgat agtgacatcg atcaggactt gattattcgc tacacgttca gcgcaccgca
    10501 ttacgccaag aatgccggcg caatgctgct ggttcgtccc cgcgtactgg gtgagatggc
    10561 gggccagtgg gacgcaaaca agccgcgcca ttacgcatat gaattccgcg caccgttcct
    10621 caatcgcgag aacgtggaaa tcactctgcc ggacggattc aaggtagatg agctgccgga
    10681 tcccatcaaa gcctcattcc aatttgccga atatgccagc aagactgaga actccggcaa
    10741 cgtcctcaaa tactctcgtg aatatcgcca gcttgccact gaggttccgc tcgatcaaat
    10801 ggaccagctc aaaaagctgt ttggcgagat caacctcgat gaaaagaaca tggcagtact
    10861 gaaaaaaacg aactgaacag cctcacgtat ttccttggca gcccttcgtc cgggctgcct
    10921 tttttgtttt ggtggttggc gaacacagca ttgacgcagc agactgccct ctgggacgcc
    10981 cctcgtttct tcggcgcttt ttatttagga attgacaatt ccaccggctt ccagcgaaac
    11041 gctccacgaa ttccgggatg caccagacaa aggatgatgg ctccatccag aaaaatcctg
    11101 aaccacgtga aggttcgcgg tgggacgtga acgctggaga gaaatgcaat ctcagagatc
    11161 gcatgcagca gtgcgaacat cacagcagca acccgcgcag cgttatccag cagccacagt
    11221 cctactccca gcacgccagg caggagcgcc agaagaaagc agcctgacag tacaattgcc
    11281 gtttcagcaa agccgccgtg aatgcggtgc gcggcgacct gccacaacag tatggcgagc
    11341 agcactcccg agaacaccca gaaataaccg gcaataaggc ttaccggaag gggcctgcgt
    11401 tccatgggcc tgctcctttg tcatgcaggc cgctgcgtcc aggtcgcgat ggaaggtagc
    11461 tcttgatttc gcggctggcg cagcagcctg cgcggtgttc tatgtgcgta aggaacagac
    11521 acccggccgg tgcggaaagt tccacacgag gaacgtctct gtcgcgctgc gtttagctca
    11581 ccccagctcc gggaaatcct cttctctgaa ctctgttgcg ggcttttcca aggtaggcct
    11641 ctccgcctcc gcagtcctca actgcacgcg acggatcttg cccgaaatcg tcttgggcag
    11701 atcaacgaac tccaacctac gcacacgctt gtagggcgcc agcactttgc ggctgtgctg
    11761 aaaaatggag agcgccagct cgcgcgatgg ctgcgtcccg gttcgcaacg tgacaaatgc
    11821 cttcaccacc gccatccgaa ttggatccgg cgaaggcact accgcgcact ccaccacatc
    11881 agggtgttca atcagcgcgc tctctacttc aaacgggctg atccgatagt cagaagcctt
    11941 gaacacgtcg tcggcgcgcc ccacaaaagt gagatagccc tcgccatcgc gctgcaccac
    12001 gtcgccggtg cgatagaact ctcctgcaat cggctgaacg ttgccatcat cgccctggta
    12061 gccgggcatc aggcccatgg accgcggatc gagcctgagg caaagctcgc cttcttccgc
    12121 gtccttgcct tccgcattga tcaaccgcac gcgatatccg ggcagcggac gccccatgga
    12181 gccaaccttc agcttctgtc ccggaggatt gcccacctgg gccgtcgtct ctgtctggcc
    12241 gtagccatcg cggatcgtca gtccccacgc ggctcgcacc tgctcaatca cctccggatt
    12301 caatggttcg cctgcgctgg ccacttcgcg cagccgcact ttccacgagc tcagattctc
    12361 ggtgaccagc atgcgccata ccgtgggcgg cgcgcaaaac gtagtcactc cgcagcccgt
    12421 gagcgtgtcc agcagattgc gcgcgttaaa gcgcgactgg ttcagcacaa agaccgtggc
    12481 ttccgcgttc cacggggcga agaagcagct ccacgcatgc ttcgcccagc cgggtgatga
    12541 caaattgcaa tgcacgtcgc ctggctttaa cccaatccag tacatggtgg aaagatgtcc
    12601 caccggataa ctggtgtggc tgtgcagcac cagcttgggt tttgacgtgg tgcccgacgt
    12661 gaagtagagc tgcatgggat cattggccat tgtctcgcca tccggctgga ataccggcga
    12721 cgatgcgtac cctgcttcaa actcgttcca tcctggcgcg gcgccaccca cggagatgcg
    12781 cgtgcagtct ttggccacac ccgcaagctt cggcgccaac tccactgcgc aaaccacgtg
    12841 gcgcacgcgc ccgcggccga tccggtctga aagatcgtcg gcagtaagca aagttgtggc
    12901 cggaatgatc acgccgccca gcttcatcac cgccagcatg gtctcccaga gctgaggcac
    12961 gttgcccagc atcagcagca cgcggtcgcc gcggcgcacc cccagctcgc gcaggtaatt
    13021 tgcaatccgg tttgaccgct ctgaaagttc ggcgaagctc agcttggtct cgcggccgtc
    13081 ttcgtaggcc acccaaagag ccgtctggtt gccgcgctct ccccgggcaa cagcgtcaaa
    13141 ccagtccagc gcccagttga aacggtccag cttgggccat tgaaagccct cgtacgcggt
    13201 ctggtagtcc tcgcggtgtt taagcaggaa atcgcgggct tcacggaaca tctgcgtggt
    13261 gctgatggca gtctcggcgg gagagctcat ggaaacctct ttcgcggcgc ttaagaaacg
    13321 ccgcaacagc atggcttgaa attctagtcc attcagtgag cccggtcaca tggcgggaga
    13381 gcgccggacc gacccgatct gcgctatagg ctcgccaaca aaaacgatga acccctcgct
    13441 ttgccctttt ccgatcactc gatcaacgga tcacccgatc acctgatatt tttgccggcc
    13501 agcgcttcca tttccttctc gccgatcacc gccactccca gctctcgcgc tttatcgagc
    13561 ttggagccgg gatcgtcacc ggccacaacg taatccgttt tcttgctcac cgaccctgac
    13621 accttgccgc ccgcatcttc aatcaggcgc ttggcgtcat cgcgagagta gctggccagc
    13681 gtgcccgtga ttacaaacgt tttcccggcc agggcggtgc cgcgttcgcg cttcttgccc
    13741 gtgaactgca ggtacttgcg cagtcgctcc accagcttgc gattgcgtgg ctcggcaaaa
    13801 aattcatgga tacttgcccc gatccgtggc ccaacttcat tcacctgctg cagctcttct
    13861 acagacgcgt tcatcagcgc atccattgat ccaaaatgct cagccaggaa ctgcgccgtg
    13921 cgctccccca caaagcggat ccccagggca aagatcacac gctccagcgg catgcttcgc
    13981 gattgctcaa tctcatccag caggttctgc gcggacttct ctccgatccg ctccagtgac
    14041 agcagtttct ctttgttcag ctcgtaaata tcggcgatgt ctttcaccag gccgcgatcg
    14101 cagagctggt tcaccagtga ctcgcccatg ccttcaatgt tcattacgga gcgcgctgca
    14161 aaatgcagga tggtttcgcg cagcttggcc ggacatgctg agttcacgca gcgatggtcg
    14221 gcctcgcctt ccacccgaac cacgtgcccg ccacattccg ggcagcgctc cggcatctga
    14281 aatgttttgt ggccgcgagg atgatccttg tcttcgatta cctgcaccac cttgggaatc
    14341 acgtcgccgc cgcgctccac cattacccag tcgccaatct tcacccccag ccgctcaatt
    14401 tcgtccatgt tgtgcaacgt ggcccggctc accgtagttc cgccaatcga gaccggcttc
    14461 agcgcggcca ccggcgtaag cttgcccgtg cgccccacct gcaccaggat gtcttccact
    14521 cttgtgactc cgctccgcgc ggcgtacttg taggcgatgg cccagcgagg agccttcccg
    14581 gtaaaaccca ggcggtcctg cgtgcgcatg gagttcacct tgatcaccac gccatcaatt
    14641 tcatagggca gcttttcccg cgctgcctcg cctttggcaa tgaacttcag cagatcgtca
    14701 atgtcatggg ccagcacgtg ctgcggattc accttgaatc cggccgtctg cagcgccttc
    14761 agcgcttcgc tctgcttgtc aggaaaatat ctgccgttca ccagcagaaa gtaagcgtaa
    14821 aaatccagcc ggcgctgggc cacaatgttc ggctccagca cacgaatcgt ccccgctgcc
    14881 gcgttgcgcg gattggcaaa cttgctcagc ccctgcgcct cgcgatcttc attcatgcgt
    14941 tcaaagccgg ccatgggcat gatcacctca ccgcgcacct caaaatcttc cggtatgccg
    15001 gccttctgca gagttgccgg attaatcgaa agcggcaccg agcgaatcgt gcggacgttg
    15061 gtggtcacgt cttcgccaat tgaaccatca ccgcgcgtca cgcccgattg cagatgccct
    15121 tcgcgatacg tcagcgccag tgacatgccg tccatcttca gctcggccac atagtccagc
    15181 ttttccgaac cagccagctc gtgcacgcgc cggtcccagt cacgcagctc ctcttcgttg
    15241 taagcgttgt ccagcgagag catgggccgc gaatgctcca ccttcacaaa gccctcgcgc
    15301 ggcttgccgc ccacgcgctg cgtaggcgaa tcccgcgtga tcagctccgg atgcgccgcc
    15361 tccagcttct tcagctcctg catgagccgg tcaaagtcgg cgtcagagag ttccggcgca
    15421 tccagcacgt aataaaggtg ctcatgccgg cgaatctcgc tgcgcagctt ctggatcttc
    15481 tgttcgactc ctttgtctct gtccttggcg gcggtgggca tgatgaagat tatcttttgc
    15541 ctcgcgtgga acccgtaccg gcaacatctc cgagcggctc atgtcgtaa
//
LOCUS       DASQYP010000200         2238 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_240477, whole genome shotgun sequence.
ACCESSION   DASQYP010000200 DASQYP010000000
VERSION     DASQYP010000200.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 2238)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2238)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2238
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_240477"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            199..1689
                     /locus_tag="VE783_06425"
     CDS             199..1689
                     /locus_tag="VE783_06425"
                     /inference="COORDINATES: protein motif:HMM:NF012664.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53066.1"
                     /translation="MTNDSAQQPSEPKAANQAPSAGAAQDDPLAEGPVAVTHHQITVG
                     GKPLKYTATAGRLALKPESGPPDAAMFFTAYTLDGEDTHARPITFVFNGGPGTATAWL
                     HMGALGPKKIKLEKDGGVPAPPYVTVENPDTLLPRTDLVFIDAPGTGYSRLRPDLTKK
                     FYNIEGDADAFYRFIRLYLTRYQRWRSPLFLFGESYGTTRAAALVNHLTDNYIPVRGV
                     TLLSVGLDFQTLNPGNMNDLPYQVIVPTYTMIAGYHKKIAPELMANLNETIKKVEQWC
                     AGDYAQALAAGNELAPEKRKQIVTQLADYTGLKPEVIEENDLRIAPEVFMHNLLKDQK
                     LEVGRVDGRFASPRPQSNANEPFFDPAMAAMFPAFNQVMNDYALTELDYKSPLPYIIW
                     DFQGVNRAWEWGNAMAGYPQTATQLQSAMAKNKYLKVLVLEGMYDIATPFYASKYTFE
                     HLRLTPEYRKNLSFADFKGGHMVYNDAAAMTEMHNVVDRWYQETMR"
     gene            complement(1690..>2238)
                     /gene="msrA"
                     /locus_tag="VE783_06430"
     CDS             complement(1690..>2238)
                     /gene="msrA"
                     /locus_tag="VE783_06430"
                     /EC_number="1.8.4.11"
                     /inference="COORDINATES: protein motif:HMM:NF013766.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008113 - peptide-methionine (S)-S-oxide
                     reductase activity [Evidence IEA];
                     GO_function: GO:0033744 -
                     L-methionine:thioredoxin-disulfide S-oxidoreductase
                     activity [Evidence IEA];
                     GO_process: GO:0006979 - response to oxidative stress
                     [Evidence IEA];
                     GO_process: GO:0030091 - protein repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide-methionine (S)-S-oxide reductase MsrA"
                     /protein_id="HYX53067.1"
                     /translation="KTSVKEVAVFSGGCFWGIQALFEHVKGVISATSGYAGGEASTAH
                     YEVVSSGGTGHAESVLVAYDPSQITYGQLLRVFFSVGHDPTEVNRQGPDEGEQYRSMI
                     SYADAEQKRIAEAYIAQLNQAKIFPRPIATQVVALKGFYPAEAYHQDYATRHPNDPYI
                     VINDAPKLVNLQKQFPDLYVKR"
BASE COUNT          489 a          603 c          694 g          452 t
ORIGIN      
        1 atgtgcgccg actttgggcg gcagactgtc attcttccgg cacaggcgag ggcgcctgtg
       61 ctacacagtt acaaaagcta cgttcagcac gcaggagagc agtcgcccag gcgatccaat
      121 caacagcccc gagccatcag tctggttaac tcatttttga gatggcttct agttattctc
      181 gccttattgt tctgcgtaat gacgaatgat tctgcgcagc agcccagtga accgaaagcc
      241 gccaatcagg cgccgagcgc gggagccgct caggatgatc cactggcgga aggtccggtg
      301 gcggtcacgc atcaccagat cacggttggg ggcaagccgc tgaagtacac ggcgaccgcc
      361 ggccggctgg ctcttaaacc ggagagcgga ccaccggacg cagcaatgtt tttcaccgcc
      421 tacacgctcg acggagaaga cacgcacgcg cgtccgatta cgtttgtctt caacggcggt
      481 ccggggacgg cgacggcatg gctgcacatg ggcgcgctgg gaccgaagaa gatcaaactg
      541 gagaaggacg gcggtgtacc ggcgccgcct tatgtcacgg tagagaaccc ggatacactt
      601 ctgccgcgca cagacctggt ctttattgac gcgccgggaa ccggctacag caggctgcgt
      661 ccggatctga cgaagaagtt ctacaacatt gagggcgatg ccgatgcgtt ctatcgcttc
      721 atacggctct acctcacgcg ttaccagcgc tggcgctcgc cgctgtttct tttcggcgag
      781 agttatggca ccacgcgggc tgcggcgctg gtgaaccatc ttaccgacaa ctatattccg
      841 gtgcgtggcg tcacgctgct ttcggttggc ctggattttc agacactcaa tcccggcaac
      901 atgaatgacc tgccgtacca ggtaattgtg cccacgtaca cgatgatcgc gggctatcac
      961 aagaagattg cgccggagct gatggccaac ctaaacgaga cgatcaagaa agtggagcag
     1021 tggtgcgcag gggattatgc gcaggcgctg gcagccggga atgagcttgc gccggagaag
     1081 cggaagcaga ttgtgacgca acttgcggat tacaccgggt tgaagccgga ggtgattgag
     1141 gagaatgatc tccgcatcgc gccggaggtc ttcatgcaca acctgctcaa ggaccaaaag
     1201 ctggaggttg ggcgtgtgga tggcaggttt gcctcgccgc ggccgcaaag caatgccaat
     1261 gagccgttct tcgatcccgc gatggctgcg atgttcccgg cattcaacca agtgatgaat
     1321 gattacgcgc tgaccgaact cgactacaag tcgccgctcc cgtacatcat ctgggatttc
     1381 cagggagtga atcgcgcgtg ggagtggggc aacgcgatgg cgggctaccc gcagaccgcg
     1441 acgcagttgc agtcggccat ggccaaaaac aaatacctga aagttctggt gctggaaggg
     1501 atgtatgaca ttgccacacc gttttatgcc agcaagtaca cgtttgagca tctgcggttg
     1561 acgccggagt atcgcaagaa cctgagcttc gccgatttca aaggcggcca catggtgtac
     1621 aacgacgcgg cggccatgac ggagatgcac aacgtggtgg accggtggta ccaggagacg
     1681 atgcgttgat caccgtttca catacaaatc cggaaattgt ttttgcaggt tgacgagttt
     1741 aggtgcgtcg ttgatcacga tgtaaggatc gttggggtgg cgagtggcgt agtcctggtg
     1801 gtaggcctcg gccgggtaga agcctttgag cgcgacaacc tgggtggcga tcgggcgagg
     1861 gaagatttta gcctgattga gctgtgcgat gtaggcttcg gcgatccgct tctgttccgc
     1921 gtcggcataa gagatcatgc tgcgatattg ctcgccttcg tcgggaccct ggcggtttac
     1981 ttcggtggga tcgtgcccga cggaaaagaa gacgcgcagc aactgtccgt aggtgatctg
     2041 cgagggatca taagccacga gcacggattc tgcatgaccg gtgccgccgg agctcacaac
     2101 ttcataatgg gcggtggaag cctctccgcc ggcgtagccg gaagtagcgg aaataactcc
     2161 cttcacgtgc tcaaacagag cctgaatccc ccagaagcat ccaccggaaa atacggcgac
     2221 ttctttgacg ctggtttt
//
LOCUS       DASQYP010000201         6472 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_114388, whole genome shotgun sequence.
ACCESSION   DASQYP010000201 DASQYP010000000
VERSION     DASQYP010000201.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 6472)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6472)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6472
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_114388"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..477
                     /locus_tag="VE783_06435"
     CDS             <1..477
                     /locus_tag="VE783_06435"
                     /inference="COORDINATES: protein motif:HMM:NF012804.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class II aldolase/adducin family protein"
                     /protein_id="HYX53068.1"
                     /translation="IVNLNGKKIRGSCKPSSEINMHLTIYQMRPDVGAVVHAHPCTAT
                     AFASCGIALDEPLCSEIVITLGEVPLAPYATTGSMELSDSLAPFVPDHDAILMANHGV
                     VTYGVDLRQAYLRMEAVEHYAKIVLAARQLGTTRTLNQSQLEQLFAARSRYRQNGH"
     gene            663..947
                     /locus_tag="VE783_06440"
     CDS             663..947
                     /locus_tag="VE783_06440"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53069.1"
                     /translation="MNRRHSKLLFVLLLVSVTLLFFIHLPSGSFQSTNGPTTPVSDWR
                     MLLITLFAILYCCSSLMHWTDRVDRIVAPVTTFQASAISISASAELPLRC"
     gene            1209..1895
                     /locus_tag="VE783_06445"
     CDS             1209..1895
                     /locus_tag="VE783_06445"
                     /inference="COORDINATES: protein motif:HMM:NF020893.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VTT domain-containing protein"
                     /protein_id="HYX53070.1"
                     /translation="MVRSAAVLLLLSGLLSISGHPWWFWLRKIGGVGLLCLGLTDGSV
                     VPIPGGTDALTILLSARHHELWIYYAGMATLGSVIGGLLTYRVGQRHGQQALLRRVGQ
                     SRARKFSWIFARWGFYAVAIPAMLPVPVSPFLLTAGATHYARRKFLSALTLGRAVKFL
                     ALAFFAATYGRKAAVRTLDHYGTILLWGLAVAAIIGTSIAASWKLREHRVVDETHDES
                     DVARVEQIGA"
     gene            complement(2089..2223)
                     /locus_tag="VE783_06450"
     CDS             complement(2089..2223)
                     /locus_tag="VE783_06450"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53071.1"
                     /translation="MTITLFLLLANLFADHVDNPGQTAIQSVSGQDHVENPSNTPLKP
                     "
     gene            complement(2346..3029)
                     /locus_tag="VE783_06455"
     CDS             complement(2346..3029)
                     /locus_tag="VE783_06455"
                     /inference="COORDINATES: protein motif:HMM:NF036524.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TetR family transcriptional regulator"
                     /protein_id="HYX53072.1"
                     /translation="MNTVPVKTRPTLRAEDTRRRIYEAAMELFREKGFEQTTMRDIAA
                     KAGVALGGAYYYFASKDAIVLAFYHEMQEGSHQEILDALAGHKKLKDRIRVVLERRFE
                     LLEPNRKFCNALFKHAPDSSDPLSPFSEETRAIRERAFEHMLWAVEGGEVNVPSDLAP
                     HLPRLLWMYQMGLILFWLYDRSTDQKRTQKLMEKSLTLLVGLLKISSLPLTKPLRKMV
                     LELLETVEH"
     gene            complement(3026..3472)
                     /locus_tag="VE783_06460"
     CDS             complement(3026..3472)
                     /locus_tag="VE783_06460"
                     /inference="COORDINATES: protein motif:HMM:NF016056.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015035 - protein-disulfide reductase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DCC1-like thiol-disulfide oxidoreductase family
                     protein"
                     /protein_id="HYX53073.1"
                     /translation="MRTLYVLYDPQCELCSRLKDWLLVQRSWLGLSMVPAGSEKAEKM
                     FPGLKDLAGCNDLVVISDEGDVYLNNAAWIMALYALEDYRDWACRLAHPLVMPFVRQA
                     FEIVSRNRYAISRWLKSGPEDMACDLSKVPLAACDVPAARITDYLE"
     gene            complement(3503..3919)
                     /locus_tag="VE783_06465"
     CDS             complement(3503..3919)
                     /locus_tag="VE783_06465"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53074.1"
                     /translation="MDPKNIIVWSYLIYLAVSITLTIWVARTLYKRGAIFLVDTFGGN
                     GELAASVNHLLVVGFYLINIGFVCLALRTADQILGWRPAIEMLSDKLGVVLLSLGAMH
                     FFNLFIFSRIRHHGKGPVPHRPPVAPDATLKLAMPR"
     gene            complement(4090..4407)
                     /locus_tag="VE783_06470"
     CDS             complement(4090..4407)
                     /locus_tag="VE783_06470"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53075.1"
                     /translation="MRHSYSMPQPMPPKHKVYEDDWGTSAREGYEDRGAFRPPRAPQK
                     QPGSPILKTVGGLCIFAGLCWAAYLYTQDLNLAMALQQNHGPVAIMGLGVVCSIIGKY
                     LRG"
     gene            complement(4503..6140)
                     /locus_tag="VE783_06475"
     CDS             complement(4503..6140)
                     /locus_tag="VE783_06475"
                     /inference="COORDINATES: protein motif:HMM:NF025034.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartyl protease family protein"
                     /protein_id="HYX53076.1"
                     /translation="MLLMRTRKWAIFCCFLSLPLFSQSNQALPKPDAPAASADSAAKT
                     SPAPAIPLMLARGLLKDRKYTEAAGAFSELVAKEPTIEEAQLGLVRSLIHIRKIDEAQ
                     AAAKSALASLPGSAEVHAVAGDAEFRVGNFGQAEVEYKAAIKLDGNSARGWFGLGRIY
                     EIISMRKHARDVYQKAHQLNPEDGQIFEHWIALLPYDQRLEALKKRAGEHPTERQAER
                     IKLLSQYVGRKPWELATANKPVQITMNPYGRRLAATNDAAVGNRVGATTISEGFALQV
                     NFNDRAGAMLLVDTGASGITIGRKLAEKAGVVKIADSYMFGIGDEGIVPTYLGWVDKL
                     RIGELEFHNCIVDVSSRTDILDNEGLIGPEVFHDFLVTLDFKERKLLLSPLPKSPNAP
                     AGEDEFAQDRYIAPEMQGFSKYFRFGHDLVVSALVNDKATGNFILDTGAGINSITPRF
                     AALVTKATADDEYRMRGVSGKVNRVLTGQKAVFQIANMRLESHELPVFDTNISSSEGT
                     EISGFIGIRTLVQMKMTIDYRDGLVNLQVYEFRKSRE"
     gene            6252..>6472
                     /locus_tag="VE783_06480"
     CDS             6252..>6472
                     /locus_tag="VE783_06480"
                     /inference="COORDINATES: protein motif:HMM:NF012927.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53077.1"
                     /translation="MANLFESLHLRGVTLKNRIMVSPMCQYSCVDGMANDWHFVHLGS
                     RAVGQAGLIVSEATAVTPEGRISPEDLGI"
BASE COUNT         1350 a         1873 c         1792 g         1457 t
ORIGIN      
        1 attgtgaacc tgaatgggaa gaagatcagg ggctcctgca agccctccag cgaaatcaac
       61 atgcacctca caatctacca gatgcggccc gacgtgggcg ccgtggtgca tgctcatccc
      121 tgcaccgcca cggcgttcgc ctcgtgcggc atcgccttgg atgagccgct ctgctcagaa
      181 atcgtgatca cgctgggcga agtgccgctg gcgccgtatg ccaccaccgg cagcatggag
      241 ctgagtgact cgctggcccc gttcgtaccc gaccatgacg ccattctcat ggcaaatcac
      301 ggtgtggtca cctatggtgt tgatctgaga caggcttatc tacgcatgga agccgtggag
      361 cattacgcaa agatcgtgct cgccgcccgg caactcggca ccacgcgtac gctgaatcag
      421 agtcagctcg aacaactgtt cgccgcccga tcacgctacc gccagaacgg ccattaaaag
      481 accgcgatcg gttcgttacc ttaagactgc cttgcctggt tcacgccggt ctaagggctt
      541 ggttctttga cggtggagac acgttccaca aacttatgat catgtaccgt tgcctatatt
      601 ggctcttggt acaacctgaa aacctggttg actggtagtc gcggagctgc caaactcttt
      661 gcgtgaaccg ccgccactcc aagctgcttt tcgtgctgct gttggtctcg gtcacccttc
      721 tattctttat tcatcttcct tctggaagtt tccagtccac caacggtcca actacgccgg
      781 tttcagactg gcgcatgtta cttattacgt tgttcgcgat tctctactgc tgctcatctc
      841 tcatgcattg gacagatcgc gtggaccgca ttgtagcgcc ggttacaact tttcaggcat
      901 ccgcaatctc catctcagca agcgctgagc tgcctctccg ctgctgagct aagactcctg
      961 ccgtctgtgg cacgtctgcc cgtgccgaaa aaccaactca gttcaccttg agacaggagt
     1021 catgatccat gcgtaagaac acgcggattt cggcaacaac tcacacgagc cagttcagct
     1081 gggcaacggt aaaacgcgac aaagataccc tgacaatccg tatccgggtc aaacccctgc
     1141 gtttgaagtc gaagcccagg aacacggtgc cgcccgactg cgacgcgcgg ctctggtaag
     1201 ctgatggcat ggtaagatcg gctgcggtcc tgctcctgct ttccggactg ctctccatct
     1261 ccggccatcc ctggtggttt tggctcagga agatcggcgg cgtcggcctg ctttgcctcg
     1321 ggttgacgga tggctcggtg gtcccgatcc ccggcggtac cgatgccctg accatcctgc
     1381 tttccgcgcg ccatcacgag ctgtggattt attacgccgg catggcgact cttggatcgg
     1441 tcataggtgg cctgctgacc tatcgtgttg gccagcgtca tggtcaacag gcgctgctcc
     1501 gtcgcgtggg acaaagccgg gcgcggaagt tctcctggat attcgcccgc tggggctttt
     1561 atgccgtagc catcccggcc atgctgcccg ttccggtttc gcccttcctg ttgaccgcgg
     1621 gagcaacaca ttatgcgcgc aggaagtttc tgagcgcgct cacgctcggg cgcgcagtga
     1681 agtttctggc tcttgctttt ttcgcggcaa cctacggtcg aaaggccgcc gtccgcacac
     1741 tcgaccacta cggcacgatt cttctctggg ggctggcagt ggccgcgatc attgggacga
     1801 gcatcgctgc gagctggaaa ctgcgtgaac acagagtggt ggacgagacc catgatgagt
     1861 ctgatgtggc gagggttgag cagatcggcg cctgatcagc agaatccctg gacgcattcg
     1921 tctgagttga ggacgcctac cctctacgcc gcaaccacta aagcattctc gtgaccttgc
     1981 gccagcccgc gactttcccg gagttccacc aaaaaatacc agaagacacc gggttccgcc
     2041 ccggtgatac cgctcgtggc ctttttgccc ttggtgctga ctcttaactc aaggtttcaa
     2101 aggcgtattg gacggatttt ccacgtggtc ctgaccggat accgactgta tggcagtctg
     2161 ccccgggttg tcgacgtggt cagcgaaaag attagccagc agcagaaaca aagttatggt
     2221 catgattttc tcctcaatcc gttctcaacg aaaacggccg cgcccactct attacaaatc
     2281 tgcgatccag cacagcctga ttaccaagag caagccagaa acgtgtggag cgcggccctg
     2341 ccacactagt gttcaacggt ttccaggagt tccagcacca tcttccggag cggcttcgtg
     2401 agcggaaggg acgaaatctt gagcaatccg acgagcagtg taaggctctt ctccatgagc
     2461 ttctgggtgc gtttttgatc tgtggagcgg tcgtagagcc agaacaagat caaccccatt
     2521 tgatacatcc acaacaggcg aggcagatga ggcgcaaggt cggacggaac attaacttca
     2581 ccgccttcca ccgcccatag catatgttca aaggcgcgct cccggatggc gcgcgtctct
     2641 tcgctgaaag gcgagagcgg atcgcttgaa tctggggcgt gtttaaagag tgcattacaa
     2701 aacttgcgat tcggctcaag cagctcaaat cgcctttcca gcactaccct tatgcggtct
     2761 ttcagtttct tgtggccggc cagcgcatcc aggatttcct gatggctgcc ttcctgcatt
     2821 tcgtggtaga aggccagcac aatggcgtct ttggaagcaa agtaataata tgcgccgccc
     2881 agcgccacgc cagctttcgc tgcgatgtcg cgcatggtgg tttgctcaaa acccttttcg
     2941 cgaaacaact ccattgcggc ttcgtagatg cgacggcgcg tgtcttcagc tcgcagcgtt
     3001 gggcgggttt ttaccgggac ggtgttcatt cgagataatc cgttatccga gcggccggca
     3061 catcgcaggc cgccagcgga accttgctca gatcacaggc catatcttcc ggcccggact
     3121 tgagccatcg agagatagcg taacggtttc gcgagacgat ctcaaaggct tgccggacaa
     3181 agggcatcac cagcggatgc gccagccggc aggcccagtc gcgatagtct tccaaagcgt
     3241 acagcgccat aatccaggcg gcattgttca gatagacatc gccctcgtcg ctgatcacca
     3301 ccagatcatt gcagccggcc agatctttga ggccggggaa catcttctcc gctttttccg
     3361 atcccgctgg aaccatggag agtccgagcc atgagcgctg caccagcagc cagtctttca
     3421 gccgcgagca caactcgcat tggggatcat agagcacata cagggttcgc ataggtcacc
     3481 tcgctttggt ctgcgtcgtg cgttatctgg gcatggcgag tttcaaagtt gcgtcgggag
     3541 ccacgggtgg gcggtgcggc acagggcctt tgccgtgatg gcgaatacgc gaaaagataa
     3601 acaagttgaa gaagtgcatc gctcccagcg agagcagcac cacaccgagt ttgtcactga
     3661 gcatctcgat ggcggggcgc cagcccagga tctggtccgc tgttcgcaat gccaggcaga
     3721 caaagccgat attgatcagg taaaaaccga ccaccagcag atgattgact gaggccgcca
     3781 gttcgccatt gccgccgaac gtatccacca gaaaaatcgc gccgcgcttg tacagcgtgc
     3841 gggccaccca gatggtgagg gtgatgctga ccgcaagata aatcaggtaa gaccagacga
     3901 tgatgttctt gggatccata agtttctccg gttttggtac ttgaacgtgt tcaatatcac
     3961 agtagccgga tcttggctcg acgtcaagga ttatttcgaa cgcgttcatt aaacacgctg
     4021 aagcgtaaaa ggtggctgtg gagcaagacg taagccccct gacgagatca ggaagaaact
     4081 gtggtcgagt tatccgcgca ggtacttgcc gataatcgag caaaccacgc caagtcccat
     4141 aatggccacg gggccgtggt tttgttgcag cgccatggcg agattcaggt cctgggtata
     4201 gagataagcc gcccagcaga gtccggcgaa aatgcagagt ccacccacgg ttttcaggat
     4261 cgggctgcca ggctgctttt gcggagcacg gggcggacgg aaggcgccgc gatcttcata
     4321 gccctcacgc gcactggtcc cccagtcgtc ctcatagacc ttgtgcttgg ggggcatggg
     4381 ctgcggcatg ctgtaactgt gccgcatctg ccgccttaga aacaaggcgt gaaaacacct
     4441 agacgccgtt caatggtaca tagaccggca atatgcacag cttttcttag tttctcgacc
     4501 cgctattccc tcgacttgcg gaattcgtaa acctgcaggt tcaccaaacc gtcacggtaa
     4561 tcaatggtca tcttcatctg taccagcgtg cggatgccaa taaatcctga gatctcggtc
     4621 ccttcggagc tgctgatgtt tgtatcgaaa accggcagtt cgtgactttc cagacgcatg
     4681 ttcgcaatct gaaaaaccgc cttctgcccg gtaagcaccc tattcacctt gccgctgacg
     4741 cccctcatcc ggtactcgtc gtcagcggtg gctttagtca caagcgcggc gaaccgcgga
     4801 gtgatgctgt tgattccagc gcctgtgtcg agaatgaaat tgccggtcgc tttgtcattg
     4861 acgagcgccg agacgaccag gtcgtggcca aagcggaagt atttggagaa tccctgcatc
     4921 tctggcgcaa tgtaacggtc ctgggcaaac tcgtcctcgc cggcaggagc attgggactt
     4981 ttgggaagcg gtgagagcag cagtttgcgc tctttgaagt ccagtgtgac cagaaaatcg
     5041 tggaatacct cggggccaat gagtccttca ttgtccagga tatcggtgcg gctggataca
     5101 tccacgatgc agttgtggaa ctcgagctca ccgatgcgga gtttatccac ccagccgaga
     5161 tacgttggca cgattccctc atcgccgatg ccaaacatat agctatcggc gattttcacc
     5221 actccggcct tctccgccag ctttcttccg atggtgattc cgctggctcc ggtatcgacc
     5281 agcagcatag cgccggcgcg atcattgaag ttgacctgca gggcaaagcc ttcactgatc
     5341 gttgtcgcac cgacacgatt accaaccgca gcatcattgg ttgctgcgag ccgtcgccca
     5401 taagggttca tggtgatctg aactggcttg ttcgcggttg ccagctccca cggtttgcgt
     5461 ccgacatact gcgagagcag tttgattcgt tcggcctggc gttccgtggg atgttccccg
     5521 gcccgtttct ttagtgcttc caggcgctgg tcgtagggaa gaagagcgat ccagtgctcg
     5581 aaaatctgtc catcttcggg gttaagttgg tgcgctttct ggtagacatc gcgcgcgtgc
     5641 ttgcgcatgg agatgatttc ataaatgcgg cccagcccaa accaaccccg agccgagttg
     5701 ccgtccaact tgatggcagc tttgtattca acttcagcct ggccaaagtt gccgacgcga
     5761 aactcggcat ctcccgccac cgcatgcact tcggcagagc cgggcagtga agccagcgca
     5821 gatttagcag cggcctgtgc ttcatcaatc ttgcggatgt gtatgaggct tctcaccagc
     5881 ccgagctgcg cttcttcgat ggttggttcc tttgccacca gctcactgaa agcgccagcc
     5941 gcttcggtgt atttcctgtc tttcagcaac ccacgagcga gcatgagagg gatcgccggc
     6001 gcaggactcg tttttgcggc cgagtcggct gaggctgcgg gagcatccgg ttttggcaat
     6061 gcctgatttg actgtgagaa caggggcaat gagagaaaac aacagaaaat ggcccacttg
     6121 cgggttcgca tgagcagcat cttaccttta aactcaccag agttccagta tccgcaggta
     6181 ctcgtttctc gctgtcgttc catggcgttt acgcagtgct ggcgcggcca tttacaatct
     6241 gaaccttcat catggcaaac ctcttcgaat ctctccatct gcgcggcgtg accctgaaaa
     6301 accgcatcat ggtatcgccg atgtgccagt actcctgtgt ggatggcatg gccaacgact
     6361 ggcactttgt ccaccttggc agtcgcgccg tgggccaggc agggctgatc gtgagcgaag
     6421 ccacagccgt aacgccggaa gggcggatca gtcctgaaga cctggggatc tg
//
LOCUS       DASQYP010000202         2258 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_29006, whole genome shotgun sequence.
ACCESSION   DASQYP010000202 DASQYP010000000
VERSION     DASQYP010000202.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 2258)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2258)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2258
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_29006"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1373
                     /locus_tag="VE783_06485"
     CDS             <1..1373
                     /locus_tag="VE783_06485"
                     /EC_number="2.7.7.65"
                     /inference="COORDINATES: protein motif:HMM:TIGR00254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0052621 - diguanylate cyclase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="sensor domain-containing diguanylate cyclase"
                     /protein_id="HYX53078.1"
                     /translation="NYTKLIYHSKQNDEKHELVREAIQKFKNNEERVLRERNEAAQVR
                     SREITQGVLVKIGIFIVFMGVLFLLVMNDSKRLRIAEQTALMAQTKLEGSLLQLKSES
                     ENSRLLNQLQTDFQICVNPAEAFRVAASYLERLIPESAGAAFSLSNVQEALETMASWP
                     RRDGTELHPVFSREDCCAVRGGRLHTHLDSPKGLECRHFSGEVPAAYICFPLSALGET
                     LGVLHLSAACPDPFTENRMVLIQQIGEYAALRLANLKLKEKLQDQSVRDPLTGLYNRR
                     FLDTSLEQELRRVGEGKGTGIGLIMADLDGFKLFNDTFGHEAGDYVLKEVGSLLRRCV
                     RSEDIVCRYGGEEFLTVIPDSTPESVCERAEQMRSAISKLELELGGRKLGKITGSFGV
                     SFCMNGNSSSDVLMREADDALYVAKRSGSDCVRLSDAVSQLMNPPKAEPEQSTSAKSK
                     SAAKRA"
     gene            1482..>2258
                     /locus_tag="VE783_06490"
     CDS             1482..>2258
                     /locus_tag="VE783_06490"
                     /inference="COORDINATES: protein motif:HMM:NF013434.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HYX53079.1"
                     /translation="MSRRTHSPDQGFDLLVIGGGINGVAIARECAQRGRRVLLVEQND
                     FGSGTTSRSTRIIHGGLRYLEQYEFGLVRESLHERERLLRESPQLVHPMQFLLVLPRS
                     PRNLLRSSLAVHFGLWLYHRWAGGRKLPGSAPDAFERALDSDKQVSVYTYEDAQCEFP
                     ERLVAEWLAESIDAGATVRNHTELLEITRTNGRVSGARLRDGISGQEYAVEVTTVVNA
                     SGPWVDRVLAASGINAPRLLGGIRGSHLVLPAFPGMSAKPV"
BASE COUNT          466 a          621 c          689 g          482 t
ORIGIN      
        1 ttaattacac caagctcatc tatcactcca agcaaaacga cgagaagcac gagctggtgc
       61 gtgaagccat tcagaaattc aagaacaatg aagagcgcgt gctgcgtgag cgcaatgagg
      121 ccgcccaggt ccgttcgcgc gagattacgc agggcgtgct cgtcaagatc ggcatcttca
      181 tcgttttcat gggcgtgctt ttcctgctgg tgatgaacga ttccaagcgt ttgcgcattg
      241 ccgagcaaac cgctttgatg gcacagacaa agttggaagg ttctctcctg cagctcaaga
      301 gcgaaagcga aaacagcagg ctgctgaatc aattgcagac tgactttcag atttgcgtga
      361 accctgcgga ggcgtttagg gtggcggcca gttatctgga gcgcctgatt ccggaaagtg
      421 ccggagctgc gttctcgctt tccaatgtgc aggaggcgct ggagaccatg gcatcatggc
      481 ctcgccggga cggaaccgaa ctccacccgg tcttttcccg cgaggattgc tgcgcagtcc
      541 gcggggggcg cctccatacc catctggatt cgcccaaagg cctggaatgc cgccatttca
      601 gtggagaggt accggcggca tacatttgtt tcccgctctc ggcactcgga gagacgctgg
      661 gcgtgctgca cctgagcgcc gcatgccctg atcctttcac tgagaatcgc atggtcctga
      721 ttcagcagat tggcgaatac gctgctttgc gcctggcgaa cctcaagctg aaagagaaac
      781 tgcaggacca gtcggttcgc gacccgctta ccggcctcta caatcgccgc ttcctggata
      841 ccagcctgga gcaggagtta cgccgggtgg gcgaaggcaa ggggaccggt attggcctga
      901 tcatggccga tctagacggt ttcaagctat tcaacgacac ctttgggcac gaggcgggcg
      961 attatgtact caaagaagtt gggtcgctgc tcaggcgttg cgtgcgatct gaagacattg
     1021 tgtgccgcta tggtggagaa gagttcctca cggtaattcc ggacagcacg ccggagagcg
     1081 tttgcgaacg cgcagaacag atgcgcagcg ccatctcaaa gctcgagctg gaacttggcg
     1141 gccgcaagct cggcaagatt acgggcagct ttggcgtctc cttctgcatg aacggaaatt
     1201 cttcgtccga tgtcttgatg cgcgaagccg acgacgccct ctacgtggcc aagcgcagcg
     1261 gcagtgactg tgttcggctg agcgatgcgg tatcgcaact catgaacccg cccaaggcgg
     1321 agcccgagca atccacctcc gcaaagtcca aatcggctgc caaacgcgcc tgagtgcatt
     1381 catcccgttt ctggtgcaaa cctccataaa cattaacttc ttcgttagct tctgaagtaa
     1441 tgttgaaggc ttcctctgca tgcatctaaa taggtgtgaa cgtgagtaga agaacgcact
     1501 cgccggacca gggctttgac ctgctcgtaa tcggtggcgg catcaatgga gttgccattg
     1561 cgcgagagtg tgcgcagcga gggcgaaggg tgctgctggt tgagcaaaat gattttggct
     1621 ccgggaccac gagccgctcc accagaatca ttcatggcgg cctgcgttat ctggagcagt
     1681 atgaattcgg gcttgtgcgg gagtcgctgc atgagcgtga gcgcctgttg agagagtcgc
     1741 cgcagctggt gcacccgatg cagttcctgc tggttctgcc gcgctcgccg cgcaatctcc
     1801 tgcgcagttc gctcgcggtg cattttggat tgtggctgta ccatcgctgg gcagggggaa
     1861 ggaagctgcc cggaagcgct cccgacgcgt ttgagcgcgc gctggattcc gataaacaag
     1921 tttccgttta cacctatgaa gatgctcagt gcgaatttcc tgagcgcctg gttgccgaat
     1981 ggctggcgga gagcatcgat gctggtgcga cagttcgcaa ccacaccgag ctgcttgaaa
     2041 ttacacgcac gaatggccgt gtctccggcg ccaggctgcg ggatggcatc tccggccagg
     2101 agtacgcggt cgaggtcact acggtcgtga atgccagcgg gccctgggtt gacagggtat
     2161 tggcggcgtc aggaatcaat gctcctcgat tgctgggcgg gatccgcgga tcccacctag
     2221 tgttgcccgc gtttccaggc atgtcggcaa aaccggtc
//
LOCUS       DASQYP010000203         8238 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_92584, whole genome shotgun sequence.
ACCESSION   DASQYP010000203 DASQYP010000000
VERSION     DASQYP010000203.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 8238)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8238)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8238
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_92584"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..210)
                     /locus_tag="VE783_06495"
     CDS             complement(<1..210)
                     /locus_tag="VE783_06495"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53080.1"
                     /translation="MSTANLTEIRSAALSKPNSAKWLVAIAVMSSAVMEVLDTSVVNV
                     SMPHIAGNLGATTDEATWVLTSYIVA"
     gene            complement(334..756)
                     /locus_tag="VE783_06500"
     CDS             complement(334..756)
                     /locus_tag="VE783_06500"
                     /inference="COORDINATES: protein motif:HMM:NF013970.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PIN domain-containing protein"
                     /protein_id="HYX53081.1"
                     /translation="MKDKFFLDTNIFVYSFDTREPAKAKVAGQLIEDGIATRKGTVSY
                     QVVQEFFNVALSKFRKPMTVAECEQYLRVIFRPLLVVHPSETLLSDALYLRERAGLSW
                     YDSLIVGAAQQSDCKVLFTEDMQHGQVFDELRIVNPFR"
     gene            complement(746..964)
                     /locus_tag="VE783_06505"
     CDS             complement(746..964)
                     /locus_tag="VE783_06505"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53082.1"
                     /translation="MKNVTFSADEDLIERARAMARAQRKTLNDLFREWLVQVTSRESS
                     RKEVNALMRRLRHVQAGRKFTRDEMNER"
     gene            1273..2004
                     /locus_tag="VE783_06510"
     CDS             1273..2004
                     /locus_tag="VE783_06510"
                     /inference="COORDINATES: protein motif:HMM:NF018899.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0019867 - outer membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="POTRA domain-containing protein"
                     /protein_id="HYX53083.1"
                     /translation="MKFLSDEPLPPVADKIRSDLQTLILQSSDDWKSEFSGRARDNWQ
                     REGYFKAVVSSPEFKQAGAEANMMDVTIHLVQGRQYKSGEITFRNNTRFSDGQLRSMI
                     PIKRSEVFDTHKIGAGIEAMRRAYAEQGFINFSAAPAISIDDMSETVSLDVDLEEGPQ
                     FRVRKFEIVGIDREKAKSLVENSGLAPGSVFNPKLLQRLFAQHEDALSPSGSAEDCTY
                     RSVDDRAGVVDLKIDVTICGKQRNL"
     gene            complement(2001..3131)
                     /locus_tag="VE783_06515"
     CDS             complement(2001..3131)
                     /locus_tag="VE783_06515"
                     /inference="COORDINATES: protein motif:HMM:NF014244.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-2 protease family protein"
                     /protein_id="HYX53084.1"
                     /translation="MRSNIKLGRIFGIEIGIHYSWFIIAILIAFSLSDHFRITNKGWS
                     ETANWGAAIVTAVLFFICLLAHELSHSLVARSRGLPVREITLFALGGVSLIEKEAPDA
                     KTEFLVAIVGPLTSLVLGGALIGLAKLISHNPEATIGTAILYWLGGTNLLLAAFNMLP
                     GFPLDGGRVLRGFIWWITGNMERSTKIASRVGQVVALLFIFVGIYQSFHGAGFGGLWI
                     AFIGWFLLQAAGANYMEVKVKHALEGLKAEDLMSRDCQIISGPTSVQDFVDHFLLRTG
                     RRCFLVTVQDRLAGLVTPHEVRALSRDEWAFTPVQQIMRPLDQLSIVTPETPITEVLE
                     MMAKQDLNQVPVVTNGSLAGMLGRGEILQALKSRVELMKTGS"
     gene            3241..4845
                     /gene="murJ"
                     /locus_tag="VE783_06520"
     CDS             3241..4845
                     /gene="murJ"
                     /locus_tag="VE783_06520"
                     /inference="COORDINATES: protein motif:HMM:TIGR01695.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0034204 - lipid translocation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="murein biosynthesis integral membrane protein
                     MurJ"
                     /protein_id="HYX53085.1"
                     /translation="MTSTPAPPRTQQHSIGRSAFLVAAGIFLSRIFGLVRESVFAHYF
                     GLSFAADAFRAALRIPNILQNLFGEGALSASFIPVYAWLVAHRDDEEAGRVAGAVFSL
                     LAFTMAVLVLLGVLATPWLIDLIAPGFEGGTRALTIQLVRIFFPGIGLMVLSAWCLGI
                     LNSHGRFFLSYVSPVIWNVAQITTLLVFGRSSEMPKLAAYTAWAAVVGSGLQFLAQLP
                     VVLSLVPALRLWFRELSENVRTIIRNFFPIFVSRGVTQLSAYIDTLLASFLPTGAVAA
                     LFNAQALYLLPVSLFGMSVSAAELPAMSSTLGNEQEVAEALRRRIESSTRRIAFLVVP
                     SAMAFFALGDVIAAAIFQSGRFHRSDTDYVWGILAGSAVGLVAATVGRLYSSAYYALR
                     DTKTPLRYAIVRVLLTTALGYFCALHLPGLLGQSRRWGAAGLTASYGIAAWVEFLLLR
                     RGMERRVGQISSSSSYFAKLWTSAFLAAVLGWVARSLLHPHHPWVTAIVALVPYGAAY
                     FGLTALMGIDQSGALLTRLRRLARRA"
     gene            complement(4987..5208)
                     /locus_tag="VE783_06525"
     CDS             complement(4987..5208)
                     /locus_tag="VE783_06525"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53086.1"
                     /translation="MVNRLLQLLSIRCSHKKISQPFAASSAIPIRRAVNSDWDSPVAT
                     QAAARHYVVCLDCGRKFEYDWANMRVVGK"
     gene            complement(5292..5780)
                     /locus_tag="VE783_06530"
     CDS             complement(5292..5780)
                     /locus_tag="VE783_06530"
                     /inference="COORDINATES: protein motif:HMM:NF016408.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polymer-forming cytoskeletal protein"
                     /protein_id="HYX53087.1"
                     /translation="MSTPSNTVSTTTTSSMPSSEPTPVAAPRSAIVNSQEQATIGKSL
                     VIKGEVTGSESLYIDGRVEGTINLPGNRVTIGRNGQVTANVNAKEVVVLGKVKGNLTA
                     SDRVDIRNEGSLSGDVQCQRISIEDGAYFKGSIDIRKPGQQEKMNGAAKTEEAKMATA
                     SA"
     gene            6403..>8238
                     /locus_tag="VE783_06535"
     CDS             6403..>8238
                     /locus_tag="VE783_06535"
                     /inference="COORDINATES: protein motif:HMM:NF012975.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0004540 - RNA nuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNB domain-containing ribonuclease"
                     /protein_id="HYX53088.1"
                     /translation="MITEQEVLHYISKQPRHIAGYKQILHDLGIRGKDRRPLEQLLRD
                     MTHRKKLVAIGKGRWSLPTSASSQDLVVGRLRMHRDGYGFVTPDTGALPPRARGKLLG
                     DIFIPPPEIGSAMHGDQVLVELGRIRPDGKGEGRILRVTERQQETVVGIFHYGDRYNF
                     VKPIDEKVAMDIVIPHGQEYPRHGDEDEFQPSDDDRDLKGPSKHHRSFTQPGGSQAQE
                     GVAQAPSPAQKHPSSTHSTRTQSPPHQDPSRIPSRNERSEVTASGEGPAPLPHRGQPA
                     KSSPSPHRKQDNLGVSEPGRASHGGAQALLPAHTPGSKGKHAGGQDRTLHPRQQSPHR
                     VLGEESRRRTWDDLENVIVEVEITQWPSANQNPRGRVVEILGYKDDFGVDVEIVIRKH
                     HIRHVFPPAVLEEAQEISPVIPKTEIAHRRDFRDLPIVTIDGETARDFDDAVLVQRLP
                     NGNYQLHVHIADVAQYVEDGTALDEEARLRGTSVYFPDRAVPMLPLELSTDICSLRPE
                     LDRLVLSCVMEIDPQGEIQNYELAEGIIRSAARMTYTDVNAIIEGDPHLRRRYAEMAN
                     NFELMLELAKILNRRRVKRGSIDFDLPEPVIEFDDFGIMKSISPSE"
BASE COUNT         1643 a         2521 c         2319 g         1755 t
ORIGIN      
        1 agccacgatg taggaagtta gtacccaggt ggcttcatca gtggtggcgc ccaggttgcc
       61 ggcgatgtgc ggcatgctca cgttgaccac tgaggtatcg agcacctcca tcaccgcgct
      121 ggacatcacg gcgatcgcga ccagccattt ggcggagttc ggctttgaca atgccgctga
      181 tcggatttcg gtgaggttgg ccgtggacat actgcagcca tttcgatgca gaagaggaga
      241 gcggtgctgg gctgaaatgg ataaggcgga acttggcaat ccgcctccgg ttggaaactc
      301 ttcctcgctg cgcgatcttg agatcactcg ggatcaacgg aacggattaa cgatcctaag
      361 ttcgtcaaac acctgtccat gctgcatatc ttccgtgaag agcaccttgc agtcggattg
      421 ctgcgctgca ccaacgatca gagagtcata ccaggaaaga cccgctcttt cccggagata
      481 aagcgcatcg gaaaggagcg tttcagaggg atgtaccacc aggagcgggc ggaagataac
      541 tcgcaagtac tgttcacact cggcaaccgt catgggcttg cgaaatttgc tcagggctac
      601 attgaaaaac tcctgcacca cctggtagct caccgttcct ttccttgttg caatgccatc
      661 ttcaatgagc tgtccagcaa ccttggcctt cgccggctcc cgtgtgtcaa agctgtagac
      721 gaagatgttc gtatccagaa agaatttatc tttcattcat ctcatccctg gtgaacttcc
      781 gtccagcctg gacatgacgc agtcttcgca tcagagcatt cacttccttg cggctgcttt
      841 cgcgcgaggt gacctggacc agccactcgc gaaagagatc attgagcgtc tttcgctggg
      901 cccttgccat agccctggcg cgttcgatca gatcttcatc cgcactgaat gtcacatttt
      961 tcatatatga tttaagtgta cacgaaaatc gtgcccacgg acgaggccta aaagagcggc
     1021 tgcggagcag aggaatatag atgtcagaac gtccttgttg cacgaatcca atttgcgaaa
     1081 attcaccgca agttgatgca attggaccgt tctggacaca acaaaccacg gtttccaggg
     1141 gggaatatgc ctcgattcgt atctgttgtg gtgcttaccc ttgcattgaa tcttttgccg
     1201 tgccgtactt ttgggcagaa cggaagggta caagctcagg cccaacaacc ggttcccatc
     1261 agatttcatg aagtgaaatt cctgagcgac gaaccgctcc caccggtagc cgacaagatc
     1321 cgttccgacc tgcagacgct gatacttcag agcagcgatg actggaagag tgaattctca
     1381 ggtcgcgccc gcgacaactg gcagcgcgag ggctatttta aggccgtggt atcaagtcct
     1441 gagttcaagc aggccggcgc tgaagccaac atgatggacg tgaccatcca ccttgtccag
     1501 ggccggcaat ataaatccgg agagataacc ttccgcaaca acacgcgctt cagtgacggg
     1561 cagctcagga gcatgatccc gatcaagcgt agtgaggtgt tcgatactca caagattggc
     1621 gcaggcattg aggctatgcg gcgcgcctat gcggagcaag gctttatcaa tttcagcgca
     1681 gcccctgcaa tttcaatcga tgatatgagc gagactgtgt cgctggatgt cgatttggag
     1741 gaaggaccgc aatttcgcgt ccgaaaattc gaaattgttg ggatagatcg tgaaaaggcc
     1801 aaatctctgg tagagaactc cggtcttgcg cctggcagcg tgttcaaccc aaaacttctc
     1861 caacggcttt ttgcgcaaca tgaagacgct ttgtcgccga gcggctctgc cgaagattgc
     1921 acctaccgct cggtggatga tcgcgcggga gtggtggacc tgaaaattga tgtcacgatc
     1981 tgcggcaagc aaaggaatct ctaacttccc gtcttcatca actccactcg cgatttcagc
     2041 gcctgcagga tctctccacg gcccagcatg cccgccaggc ttccgtttgt aaccacgggt
     2101 acctgattca ggtcttgctt tgccatcatc tccagcactt cagtaatcgg cgtttccggc
     2161 gtgacgatcg agagctgatc caacggccgc atgatctgct gcacaggagt aaaggcccac
     2221 tcatcgcgac tcagcgcgcg cacttcgtgg ggcgtaacca ggccggcgag ccggtcctgc
     2281 actgtgacca gaaagcagcg cctgccggta cggagcagga agtggtccac gaaatcctgc
     2341 acgctcgtcg gcccggagat gatctggcag tcgcgcgaca tcaggtcttc ggccttcagc
     2401 ccttccagcg cgtgctttac cttcacttcc atgtaattgg ctccggcagc ctgcagcagg
     2461 aaccagccga taaatgcgat ccacaatcct ccgaagccgg cgccatggaa ggactgataa
     2521 ataccgacga agataaagag gagcgccacc acctggccga cccgtgaggc gatcttggtt
     2581 gaacgctcca tgttgccggt gatccaccag atgaagccgc gcagcacgcg tccgccgtcc
     2641 aggggaaagc cgggcagcat attgaaagcg gcgagcagga ggtttgttcc gcccagccag
     2701 tagaggatgg ccgtgccgat tgtggcttca ggattgtggc tgatcagctt ggccaggccg
     2761 atcagtgcgc cgccgagaac caggctggtc agcggaccca caatcgccac cagaaattcc
     2821 gttttcgcgt ccggcgcttc tttttcaatc agcgatacgc cgccgagcgc gaagagcgta
     2881 atctcgcgga ccggcagccc gcgcgagcgc gccaccagcg aatgcgagag ctcgtgcgcc
     2941 agcaggcaga tgaagaaaag gacagcagtc acgatcgccg caccccagtt cgccgtctct
     3001 gaccagccct tattggtgat gcggaaatgg tcagacaggg agaaggcgat caggattgcg
     3061 atgatgaacc agctatagtg aatgccgatt tctatgccga agatgcgacc cagcttaatg
     3121 ttcgagcgca tacgcctgct ttcagcggct gcggagccgc ctgatctcat tatagaaagc
     3181 gaccgcggga catgaggtaa tttgcgccct cccaccccgc tgtgacacac tccatggcgg
     3241 atgacctcca cgcccgctcc gcctcgtacc cagcagcaca gcattggccg ctcggctttt
     3301 ctggtggcgg cggggatttt cctgagccgc atcttcgggc tggtgcggga gagcgtgttt
     3361 gcccattact tcgggttgtc attcgcggct gacgcatttc gcgccgcgct gcgcatcccc
     3421 aacatcctgc aaaacctgtt tggcgaaggc gcgctgtcgg cgtcttttat tcctgtctac
     3481 gcctggcttg tcgctcatcg cgatgacgaa gaagccggtc gagtggcggg agcagtgttt
     3541 tcgctgctgg ccttcaccat ggcagtgctg gtgctgctcg gcgtactggc cacaccatgg
     3601 ctcatcgacc tgatcgcacc tggctttgaa ggcggtacgc gcgccctgac gattcagctg
     3661 gtccggattt tctttcccgg tatcgggctc atggtgctga gcgcctggtg cctcggaatt
     3721 ctcaacagcc acggaagatt ctttctctcc tatgtttcgc cggtgatctg gaacgtggcg
     3781 cagatcacca cgctgctggt gttcgggcgc agcagcgaga tgccaaagct ggcggcgtac
     3841 acggcctggg cggctgtggt cggcagtgga ctgcagtttc tggcgcagct tcccgtggtg
     3901 ttgtcactgg tgcccgcgct tcggctctgg ttccgcgaat tgagcgagaa tgttcgcacc
     3961 atcatccgca acttcttccc catttttgtg agccgcggtg tcacccagct cagcgcatac
     4021 attgacacgt tgctggccag cttcctgccc acgggcgccg tggccgcgct cttcaacgct
     4081 caggcgcttt atctgctgcc ggtgagcttg tttgggatgt cggtttctgc ggccgagctg
     4141 ccggcgatgt cgagcaccct ggggaacgag caggaagtgg ccgaggcgct gcgccggcga
     4201 atagaatcca gcacgcgacg gatcgccttt ctggtggtcc cgtcagccat ggccttcttt
     4261 gcgctgggcg acgtgattgc cgcggcaatt ttccagtccg gccgtttcca tcgcagcgat
     4321 accgattatg tctggggcat cctggcaggt tctgcggtgg ggctggtggc cgcgacggta
     4381 ggccggcttt attcttccgc ctattacgcg ctgcgcgaca ccaaaacacc gctgcgctat
     4441 gcgatcgttc gcgtgctgct caccacggct ttgggctact tttgcgcgct gcatctgccg
     4501 ggattgcttg gtcagagccg ccgctggggc gcagccgggc tgaccgcctc ttacggaatc
     4561 gccgcctggg tggaatttct gctgcttcgc cgcggcatgg agcggcgagt ggggcagatc
     4621 agctcatcgt cttcttactt cgccaaactc tggaccagcg cattcctggc tgccgtgctg
     4681 ggctgggtcg cgcgatccct gctgcacccg caccatccat gggtgactgc catagtggcg
     4741 ctggtacctt acggcgcggc ttactttggg ctgacggcac tgatgggcat cgaccagtcc
     4801 ggcgcgctgc tcacccgcct gcgacggctc gcgcgcagag cgtagccgcg acccacttaa
     4861 aacgacaaag ccgcgactct tcgcccatca acaaggcggg aacagcttcc ctgttgagcg
     4921 gagaggagtc gcggcttcgg ggggtatgcc gcttcgacgc gtcttactgc ctgttacttc
     4981 cctgcgttac tttccaacca cccgcatgtt ggcccagtcg tactcgaact tgcggccgca
     5041 atccaggcaa accacataat gtcgcgcagc tgcctgcgtg gccaccgggg aatcccagtc
     5101 tgaattcacc gcgcggcgga tcggaattgc cgacgatgcc gcaaacggct gcgagatttt
     5161 cttgtgcgaa cagcggattg agaggagctg gaggagtcgg ttaaccatgt gacttctact
     5221 tcttcagtac aaaatgtatg attgcaatga atgagtccgg acgcttccgc aggaagcgtc
     5281 cggctaaaag cttacgcgct ggcggttgcc atcttggctt cttcggtctt cgcggcgccg
     5341 ttcatctttt cctgctggcc cggtttccga atgtcgatcg aacccttaaa gtaggctccg
     5401 tcctctatgc tgattctttg gcactgaacg tccccactca aggacccttc gttccggatg
     5461 tccacccggt cgctggcggt gaggttgcct tttaccttgc ccagaaccac gacttccttc
     5521 gcgttcacat tggcggtgac ctgtccgttg cggccgatgg tcacgcgatt tcccggcagg
     5581 ttgatggtgc cttccacgcg gccgtcaatg taaagcgact cagatccggt cacttcgccc
     5641 ttgatcacaa gcgacttgcc gatggtggcc tgttcctggc tgttgacaat ggctgaccgc
     5701 ggagccgcga ccggcgtcgg ctcgctgctg ggcatcgatg aggtggtagt ggtgctaacg
     5761 gtattgctgg gtgtgctcac ggctgttttc tccggttccg gtgtggtagt ggtcggtttc
     5821 gtgggtgaac tcgcgggctt ccacattgcg aatacttcct ttcaggtttc gataagggta
     5881 tgcagcgcgc agcccggccc gtcgaccggt tgctgctcct ctggcaaatt gagaactgct
     5941 ggtttacaac ctacggcacg ttcgctgcca aattcacagc cccgccgaca atcgccgatt
     6001 atcctgattt ggcgctgctt ttcgcggatg cacgcaaccc cgggggaccg catacacctc
     6061 acttacagaa tgtaattatt cccgctctgc cgggagttct tatatcgggc atgcctctta
     6121 gttgccaaac ctgattagcg ctaggatcat gttaagaggg ttaaagcgag gttcacccga
     6181 aaggacaacc atgctttgcg cgatcggacg atgtccccga tcgaagttgg taaattcgta
     6241 agttggtaat ctggtaattt cgagcgccgg cgaatcttgc gctttcggct tggtaaattt
     6301 ccatcgccgg cggatcttgc ggtttcaaat tacccactta ccaacttacc caattaccaa
     6361 cttacgcagt caccaactta cccacttaca aactttgtac cgatgatcac tgagcaagaa
     6421 gtcctccact acatctcgaa gcagccgcgc cacattgccg gatacaagca gatcctccac
     6481 gacctcggca tccgcggcaa agatcgccgt ccccttgaac agctcctccg tgatatgacg
     6541 caccgcaaga agctggtcgc cattggcaag ggccgctggt cgctcccgac ctccgcctcc
     6601 tcgcaggacc tggtcgtcgg ccggctccgc atgcatcgcg acggctacgg cttcgtcacc
     6661 ccggataccg gcgccctccc gccccgcgcc cgcggcaagc tcctgggtga catctttatt
     6721 cctccgccgg aaatcggcag cgccatgcac ggcgaccagg tgctggtcga actgggccgc
     6781 atccgccccg atggcaaagg cgaaggccgc atcctccgcg tgaccgagcg ccagcaggaa
     6841 accgtggtcg gcatctttca ttacggcgat cgttacaatt tcgtgaagcc aatagacgag
     6901 aaagtcgcca tggacatcgt catcccccac gggcaggaat atcctcgcca cggcgacgaa
     6961 gacgaattcc agccgtcaga cgatgaccgc gacttgaaag gcccttcaaa gcaccaccga
     7021 tctttcaccc agcccggcgg ttcgcaagct caagaaggtg tagcgcaggc gccctcgcct
     7081 gcgcagaagc atccctcttc cacgcattca actcgaacac agtctccccc tcaccaggac
     7141 ccatcccgaa tcccgagccg gaacgagcgg agcgaagtga cggcaagtgg tgagggaccg
     7201 gctccgctgc cgcaccgcgg tcagcccgcg aagtcctccc cttcgcccca tcgcaagcaa
     7261 gacaatttgg gggttagcga gccaggccgc gcttcccatg gtggagcgca ggcactcttg
     7321 cctgcgcaca cgccggggtc taaagggaaa catgcaggtg ggcaggatcg caccctccat
     7381 cctcgccaac aatccccgca cagggtgttg ggcgaagaat cccgccgccg cacctgggac
     7441 gacctggaaa acgtcatcgt cgaagtcgaa atcacgcagt ggccctccgc caaccagaat
     7501 ccccgcggcc gtgtagtgga aatcctcggc tataaagacg atttcggcgt cgacgtggaa
     7561 atcgtcatcc gcaagcacca catccggcac gtttttccgc cggcagtgct tgaagaagcg
     7621 caggaaatca gcccggtcat cccgaagact gagatcgccc accgccgcga cttccgcgac
     7681 ctgcccatcg tcaccattga cggtgagacc gcccgcgact ttgacgacgc cgttctcgtc
     7741 cagcgcctcc ccaacggcaa ttaccagctt cacgtccata tcgcagacgt ggcgcagtac
     7801 gtggaagatg gcaccgcgct cgatgaagaa gcccgccttc gcggaacctc cgtttacttc
     7861 cctgaccgcg ccgtgcccat gctgccgctt gagctctcta ctgacatctg cagcctccgc
     7921 cccgagcttg accgcctcgt cctctcctgc gtcatggaaa tcgaccccca gggcgagatc
     7981 cagaactacg aactggcgga aggcatcatc cgctccgctg cgcgcatgac ttacacggac
     8041 gtgaacgcca tcatcgaagg cgacccgcac ctgcgccgcc gctatgccga gatggccaac
     8101 aacttcgagc tcatgctgga gctggccaag attctcaacc gtcgccgggt caagcgcggc
     8161 tccattgact ttgacctgcc ggagccggtc atcgagtttg acgacttcgg catcatgaag
     8221 agcatctcgc cttcggag
//
LOCUS       DASQYP010000204         5389 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_74999, whole genome shotgun sequence.
ACCESSION   DASQYP010000204 DASQYP010000000
VERSION     DASQYP010000204.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 5389)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5389)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5389
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_74999"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..222
                     /locus_tag="VE783_06540"
     CDS             <1..222
                     /locus_tag="VE783_06540"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53089.1"
                     /translation="ISHVAPIKPKTFSDFEAAAKAMRDNEGRKESIFRQAVDAEKNKA
                     DLLEKKFQEAIKKAKEAPDEPRIRDFDLD"
     gene            233..904
                     /locus_tag="VE783_06545"
     CDS             233..904
                     /locus_tag="VE783_06545"
                     /inference="COORDINATES: protein motif:HMM:NF015000.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerophosphodiester phosphodiesterase"
                     /protein_id="HYX53090.1"
                     /translation="MPADLLLLGHRGARRYAPENTIPAFDMAIKHGAHGFEFDVRCTR
                     DRHTILCHDPKLNRLTLRRHTLKQIQESCNSDGVPPCLEDVLERYGKNTFLNIEVKVR
                     GIEPMVAELIRRHRPRNYFISSFRPGVVRRLHELDSSLVLGALAQTRWQLRRWRMLPI
                     SYVVPHYRLLTQRLIDKLHTAGKKVVTWTVNDPRQMRRAADLGVDAIISDDTRLLVQT
                     LGNSR"
     gene            complement(925..3021)
                     /locus_tag="VE783_06550"
     CDS             complement(925..3021)
                     /locus_tag="VE783_06550"
                     /inference="COORDINATES: protein motif:HMM:NF037015.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ig-like domain-containing protein"
                     /protein_id="HYX53091.1"
                     /translation="MKAFRIVCLASLLAISNALIAQTVTMSGKTETMKLPATAEPFQA
                     NSQAAAAQQGAIPQPALEESLPPTPAPAGGTAAAATTVQPQSLTAPGATLGSVFDVPP
                     AGLPPDSAIASGPNHVLTIINSVIQIFNKSGTLVSSTGLFTLFSTLPNSGSCCFDPRA
                     TYDQNHGRFIIAAAAVNSTTSSHIFFAVSQTSDPTGTWFKYDLSLTPLTPEGDPASVD
                     FPSLGVSNGLLLLSASLPQSNLVGTESTSVWALQLAPLLTGNSTLSVTTFNNVKLPSG
                     GRAFTIQPAVTYGTPGTAYLASTDGNPQVGGSAIHLFTVPETATPTLSVVDVPVAAYK
                     VVASAPQPNTTTQLTVSGDIMISSPVWRNGSLWVAHAVADSTGTIPVVRWYEVVTGTK
                     TVRQSGTLTGAGAAWYPSITVTASGATDIVFHTSSSTQFASPTFAHREASDPLGTMPV
                     QAIYQNGLASYTAAGGRWGDYTAIIADPDGVSSWTLAEYPTSASSYRLSVAHLLSSAA
                     APPPPGCSSSTVGVNICSPAPGSTVNSPVTISAASLGNARITAMKAYANGVTVASSTG
                     STLNAQIALANNTYNLVVKAWDSTGAVYQKSESITVGGPPPAACSISTVGVKICAPTA
                     GSTVSSPVQITAAAKGTNKITGMKAYANGVNVATSTGGILSAKVTLGPGTYTLTVKGW
                     ESTGTVHQTTETFTVH"
     gene            complement(3236..4540)
                     /gene="aceA"
                     /locus_tag="VE783_06555"
     CDS             complement(3236..4540)
                     /gene="aceA"
                     /locus_tag="VE783_06555"
                     /EC_number="4.1.3.1"
                     /inference="COORDINATES: protein motif:HMM:NF011645.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004451 - isocitrate lyase activity
                     [Evidence IEA];
                     GO_process: GO:0019752 - carboxylic acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isocitrate lyase"
                     /protein_id="HYX53092.1"
                     /translation="MQLNERQLETLWANDARWNGITRPYTAKEVVRLRGTVHVEHSLA
                     RLGAERLWKLLREEEFVPALGALTGNQAVQQVLAGLKAIYLSGWQVAGDANLAGQMYP
                     DQSLYPSNSVPAVVKEINNAFLRTDQIYHAEGKSSLYWFAPIVADAEAGFGGALNAFE
                     LMKSMIEAGAAGVHFEDQLASAKKCGHMGGKVLVPAQEFVQKLIAARLASDILGVPTL
                     LIARTDANSAKLLTTDSDIRDVEFLTGERTPDGFLGYKGGIDAAIARGLIYAPYADLL
                     WCETSEPNVEEARRFAEAIHAKFPGKMLAYNCSPSFHWKRKLDDATIAKFQRELAAMG
                     YKFQFVTLAGFHALNFSMYELARNYAQSGMAAYSHLQEREFESAEKHGYTAVRHQRFV
                     GTGYFDEITQTVAAGAASTTALEGSTENEQFDVEKVNLEKAV"
     gene            4773..>5389
                     /locus_tag="VE783_06560"
     CDS             4773..>5389
                     /locus_tag="VE783_06560"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53093.1"
                     /translation="MVTPPPNRRASAIPDQLLHQLKEFLVNRQVSDGIALLDANAELF
                     TVIGPGMRNAAALVGAVAQWIDIGYRGPELLHELLAKFPVEQRPKLPVGEYLQLRTAE
                     GLLCLLGDDSDEALRHFDLVLTLQNLIEDKEVVAIVHFWNARCHRKKGEYDEALKRAG
                     VGRELAMALEFPKMAAVMRVLESWLLFQKGHFREASRILDQAELAL"
BASE COUNT         1062 a         1502 c         1673 g         1152 t
ORIGIN      
        1 atttcgcacg tggcgccgat caagcccaag actttttctg actttgaggc cgctgccaag
       61 gccatgcgtg acaacgaagg gcgcaaggaa tcgatcttcc gccaggcagt ggacgcggaa
      121 aagaacaagg ccgacctgct ggagaaaaag ttccaggaag ccatcaaaaa ggctaaagaa
      181 gcgcctgacg agccgcggat ccgcgatttc gatctggact aacgataacc gcttgcctgc
      241 cgatcttcta ttgctcgggc accgtggcgc gcgccggtat gcgcccgaga acaccatccc
      301 cgccttcgac atggcgatca aacatggcgc gcacggcttc gagtttgacg tgcgctgcac
      361 ccgcgaccgc cacacgatct tgtgtcacga tccgaagctg aaccggctta cattgcggcg
      421 acacacgctg aagcagatac aagagagctg taactctgat ggagtgccgc cgtgtcttga
      481 agacgtgctg gagcgctatg gcaagaacac gttcctcaat atagaggtga aggttcgagg
      541 aatcgagccg atggtggcgg agttgatccg gcgccaccgg ccgcgaaact atttcatttc
      601 ctcattccgc cctggcgtgg tgcgacgtct gcatgaactt gattcttctc ttgttctcgg
      661 tgcccttgcg cagacgcgtt ggcagcttcg ccgctggcgc atgctaccga ttagctatgt
      721 ggtgccgcat tatcgtctgc tcacgcaacg ccttatagat aagctgcata cagcaggaaa
      781 gaaagtggtt acgtggactg tcaacgatcc gcgccagatg cgccgcgcgg ctgatctcgg
      841 cgtggatgcc atcatttccg atgacacccg actgctggtt caaacgctcg ggaacagccg
      901 ctaatcgcaa ttgtgttttg ccagttagtg gaccgtaaaa gtctcggtcg tctgatgaac
      961 tgttccggtc gattcccagc ctttcacagt tagcgtgtac gtgcctggtc ccagtgtgac
     1021 ctttgcgctc agtattccgc cggtgctggt cgctacgttg accccgttcg cataggcctt
     1081 catgccggtg attttgttcg tgcctttggc cgccgcggta atctgcacag gagaactcac
     1141 ggtggaaccc gctgttggtg cacagatctt cactcccaca gtgctgatac tgcaagcagc
     1201 aggcggcggt ccgccgaccg tgatgctctc actcttctga taaaccgccc cggtggaatc
     1261 ccaggctttg accacaagat tgtaggtgtt gttcgcgagc gctatttgcg cgttgagcgt
     1321 tgagccggtg ctgctggcca cggtaactcc attcgcgtat gccttcatcg cggtgatccg
     1381 agcatttccc aggcttgccg ctgagatggt taccggtgaa ttcacggtgg aaccaggcgc
     1441 cggcgaacag atgttcactc cgacagtgct gctactacaa cccggaggag gtggtgctgc
     1501 agcactcgaa agcaggtgcg ccacagagag gcggtagctg cttgcggatg tgggatattc
     1561 ggcgagagtc cagctggaaa caccatcagg atcggcaatg atggcagtgt agtcgcccca
     1621 acgccctccc gccgcggtgt acgatgccag accattctga tagatcgcct gtaccggcat
     1681 ggttcccagc ggatcactgg cttcacgatg cgcgaatgtc ggcgaggcga actgagtcga
     1741 gctgctggtg tgaaaaacaa tgtcagttgc gccggaggcc gtgacagtaa tcgagggata
     1801 ccatgcagca ccggccccgg ttagcgtgcc cgattgccgg acggtcttgg tcccagtgac
     1861 tacttcatac cagcgcacga ccgggattgt gccagtcgaa tccgctaccg cgtgggccac
     1921 ccacaatgac ccgttgcgcc agacagggct gctgatcatg atgtcgccgc tgaccgtcag
     1981 ctgcgtcgtc gtgttcggct gaggtgcgct ggcgaccact ttgtacgccg ctaccggaac
     2041 atcaacgact gagagggtcg gtgtggccgt ctcgggaacg gtgaagaggt gaatagcact
     2101 accgccgact tgcgggttgc cgtccgttga tgccaggtaa gcggttccgg gtgttccgta
     2161 agtcaccgca ggctgaatgg tgaaggcgcg accaccactc ggcagtttca cattattgaa
     2221 tgtggtcacg cttaaagtgg agttgccggt gagaagcggc gcaagttgta gggcccacac
     2281 tgatgtgctc tcagtgccta caagatttga ttgcggcaga ctggccgaga gcagcagcaa
     2341 cccgttgctt acaccgagcg acggaaagtc caccgaggca ggatcaccct ccggcgttag
     2401 cggcgtcaga ctcaagtcat acttgaacca cgttccggtc gggtcggagg tctggcttac
     2461 ggcgaagaag atgtgcgaag aggtggtgga gttcaccgcc gcagccgcaa tgatgaagcg
     2521 gccgtggttc tggtcgtacg tggcccgcgg atcaaagcag cagctgccgg agttcggcag
     2581 tgtgctgaac aacgtaaata ggccggtgct cgacaccaga gtgccggatt tgttgaaaat
     2641 ctggatgacc gaattgatga ttgtgagcac gtgattcggt cccgatgcta tcgccgaatc
     2701 cggaggcaat ccggcaggag gaacgtcgaa cacgctgccc agggtcgcac ccggggccgt
     2761 caacgactgt ggctgcaccg tcgtcgcggc cgcagccgtt ccgccggcgg gagctggagt
     2821 cggcggcaag ctttcctcaa gggcaggctg cgggatggct ccttgttgtg ccgcagcggc
     2881 ctgagaattt gcctggaacg gttcggcggt tgccggcagc ttcatggttt cagttttgcc
     2941 gctcatagtt accgtttgag caatcagtgc gttggaaatt gcgaggagag aagcaagaca
     3001 gacgatgcgg aatgctttca tggtgcgggg ccccgggagt tgagaggtga acgaatctgc
     3061 tggattatga gttgctgccg aattccgctg gttgcctgtg acgaacttcc gggaacggct
     3121 gactatggct tcctctgaga gagctgcggg atgattaagg tggaactaag cacaaaaaga
     3181 caaaaggccc gctccgccgg ttagcggaac gggcccttat tgtcatgcac agcagctaca
     3241 cagctttttc caggttgacc ttctccacat cgaactgctc attctccgtc gaaccttcaa
     3301 gtgcagtggt tgaggccgcg ccggctgcaa ccgtctgcgt aatctcatcg aagtatccgg
     3361 tcccgacgaa gcgttggtgg cgcactgccg tatagccgtg tttctccgcg ctctcaaatt
     3421 ccctttcttg aagatgcgag taggccgcca tgccgctctg ggcgtaattg cgcgccagtt
     3481 cgtacatact gaagttcagg gcatggaagc ccgccagcgt gacgaactgg aacttgtagc
     3541 ccatggccgc cagttcgcgt tggaacttgg cgatggtggc gtcgtcaagc ttgcgcttcc
     3601 agtggaacga aggcgagcag ttgtatgcca gcatcttgcc ggggaacttg gcatggatgg
     3661 cttcggcgaa gcgccgtgcc tcttctacgt ttggctctga cgtttcgcac cagagcaggt
     3721 cggcgtacgg tgcgtaaatc aggccgcgcg caatggcagc atcgattccg cccttgtaac
     3781 cgaggaagcc atccggtgtg cgctcgccgg tgaggaactc cacgtcgcga atgtcgctgt
     3841 cggtggtcag cagcttggcg ctgttggcgt cagtacgcgc gatcagcagc gtcggaaccc
     3901 cgagaatgtc gctggccagg cgtgccgcga tcagcttctg tacgaactcc tgcgccggaa
     3961 cgagcacttt gccgcccatg tgtccgcact tcttggccga agccaactgg tcttcgaagt
     4021 ggacgccggc ggctccggct tcgatcatcg acttcatcag ctcgaaagcg ttcagcgcgc
     4081 cgccgaatcc ggcttcggcg tcggcgacga tgggagcgaa ccagtagagg ctgctcttgc
     4141 cttcagcgtg gtagatctgg tcagtccgga ggaaggcgtt attgatctct ttcaccacgg
     4201 caggaacgct attggaagga tagaggctct ggtcgggata catctggccg gccaggttgg
     4261 cgtcgccggc tacctgccac ccgctgagat agatggcctt caatccggcc aacacctgct
     4321 gcacggcctg gttgccggtg agggcgccga gggccggaac aaattcttct tccctgagca
     4381 gcttccacag ccgctccgcg ccgagacggg cgagtgagtg ttcgacatgg actgtgccgc
     4441 ggaggcgcac aacttctttg gcggtgtaag ggcgcgtgat tccgttccaa cgggcgtcgt
     4501 tcgcccacaa ggtttcaagc tgtctctcgt ttagctgcat tgcatgtctc ctgctgtatt
     4561 cgggccgcga agggcaggcg cttgggccgg caggatcatt agaagctgaa agtgagcttc
     4621 gcgacaaacg agatagcccg aaacggacta catggccaaa atgggaatat agcgcgtaat
     4681 ttgcggctat aaatggcatt tatagcgtgt actctggtca ccccgtccag ttcgggcttg
     4741 tatgaggcgg cagctccggc tatcattccc gtgtggttac tccaccgcca aaccggcgtg
     4801 cctccgccat tcccgaccag cttcttcatc agcttaaaga gttcctcgtc aatcgccagg
     4861 taagcgacgg cattgctttg ctggatgcaa acgccgagct tttcacggtg attgggcccg
     4921 gcatgcggaa tgctgccgct ctggtgggag cggtggcgca atggatcgat atcggctacc
     4981 gcggtcctga gctattgcat gagctgctgg cgaagtttcc ggtggaacag cggccaaagc
     5041 tgccggtcgg ggaatacctt cagcttcgca cggcggaggg cctgctttgt ctgctaggcg
     5101 acgattccga tgaggcactg cggcactttg atctggtgct cacactgcag aacctgattg
     5161 aagataagga agtggtggca attgtgcatt tctggaatgc gcgctgccat cgcaagaagg
     5221 gcgagtatga cgaggcgctt aagcgcgcag gcgtgggtcg cgaactggcg atggcgctcg
     5281 agtttccaaa aatggccgcc gtgatgcgtg tgctcgaaag ctggctgctg ttccagaagg
     5341 ggcacttccg tgaggcgagc cggattctgg accaggcgga gctcgcgct
//
LOCUS       DASQYP010000205         2829 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_263518, whole genome shotgun sequence.
ACCESSION   DASQYP010000205 DASQYP010000000
VERSION     DASQYP010000205.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 2829)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2829)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2829
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_263518"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..908
                     /locus_tag="VE783_06565"
     CDS             <1..908
                     /locus_tag="VE783_06565"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53094.1"
                     /translation="DKWQGSLASLAGARVAIEDVSATARDYAEEIDASPERLAEVEDR
                     LALIDRLRRKYGSTVDEVIAYGQEVARKLDELENREDHLRELKKQLDVTAAAYLAGAH
                     ALSKKRYSSAKELQKLVEAEINQLAMKAQFKIEVSGSDDEANWSASGFDTVEYLISPN
                     PGEPLKPIEKIASGGELSRVMLALKATIETGKKSKSAVQRTLVFDEIDTGIGGRAAEA
                     VGKKLKALSRNNQVLCITHLPQIASFADHHYLIEKKETAGKTKTLVRKLAAEQRTEEI
                     ARMLSGAELTETSRQHAEQLLKANA"
     gene            1279..2253
                     /gene="ispH"
                     /locus_tag="VE783_06570"
                     /gene_synonym="lytB"
     CDS             1279..2253
                     /gene="ispH"
                     /locus_tag="VE783_06570"
                     /gene_synonym="lytB"
                     /EC_number="1.17.7.4"
                     /inference="COORDINATES: protein motif:HMM:NF002189.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051745 - 4-hydroxy-3-methylbut-2-en-1-yl
                     diphosphate reductase activity [Evidence IEA];
                     GO_process: GO:0019288 - isopentenyl diphosphate
                     biosynthetic process, methylerythritol 4-phosphate pathway
                     [Evidence IEA];
                     GO_process: GO:0050992 - dimethylallyl diphosphate
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-3-methylbut-2-enyl diphosphate
                     reductase"
                     /protein_id="HYX53095.1"
                     /translation="MTAQNGKTLILLKPRGFCAGVVRAIDIVRIALDAFGPPIYVRKE
                     IVHNRYVVEDLKQKGAIFVDEVDEVPDGQRLIYSAHGVAPSVRDASKLRNLKVIDATC
                     PLVTKVHVEAVKYAKGGYSIILIGHHDHDEVVGTLGEAPEVTQVVGSAAEVEQLEVPD
                     PTRIAYITQTTLSLDETKDVIDALRKKFPLIEGPHAQDICYATQNRQTAVKDVAHQAE
                     LLLVVGSENSSNSNRLVEVSTNLGTDSYLIDAAKDIKPEWLATVNTVALTAGASAPEV
                     LVEQAVEVLKGHGFTNIREVEVMPENVRFGLPPEIVEAIAAAPAASGD"
     gene            2257..>2829
                     /locus_tag="VE783_06575"
     CDS             2257..>2829
                     /locus_tag="VE783_06575"
                     /inference="COORDINATES: protein motif:HMM:NF024646.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prenyltransferase/squalene oxidase
                     repeat-containing protein"
                     /protein_id="HYX53096.1"
                     /translation="MSAKFEGHPAQMLFGKIEGMLGRVSSGIDKARDYLFGQQHEDGY
                     WCGELEADTTLESDYIAIHTLLGTGNKQRMERAVPEIIRHQNEDGGWPIYAGGPSNIS
                     ASVKAYFSLKLMGMGPDHPVLERARTRILEMGGVTECNTFTKIYLCFLGQYDWEAVPA
                     VPPEIVLFPNWFWFNIYEISSWSRAILIPLS"
BASE COUNT          657 a          754 c          888 g          530 t
ORIGIN      
        1 atgacaagtg gcaggggtcc ctggcgtctc tggccggcgc gcgggtggcc atcgaagacg
       61 tgagcgcaac ggcgcgcgat tacgcggaag aaatagacgc ctcgcctgag cggctggccg
      121 aagtggaaga ccggctggcg ctgatcgacc ggttacgacg caagtacggc agcaccgtgg
      181 atgaagtaat cgcctacggt caggaagtcg cgcgcaagct ggacgagctg gaaaaccggg
      241 aagatcatct gcgcgagttg aagaagcagc ttgatgtcac cgcggcagcc tatctggccg
      301 gggcacatgc gctctcgaag aagcgctact cgtccgccaa agagttacag aagctggttg
      361 aagcagagat caaccaactg gcaatgaagg cgcagttcaa gattgaggtg agcggatcgg
      421 atgatgaggc aaactggtcc gcgagtggat tcgatacagt tgaatatctg atctcgccga
      481 atccgggtga gccgctgaag ccgattgaaa agatcgcctc gggtggtgag ctctcgcgtg
      541 tgatgctggc gttgaaggcg accatagaga cgggcaaaaa gagcaagtct gccgtgcagc
      601 gcacgcttgt gttcgacgag atcgatacag gcataggcgg ccgagcggca gaagccgtgg
      661 gcaagaagct gaaagcgctc tcaaggaata atcaggtgct ctgcattacg cacctgccgc
      721 agatcgcgtc ctttgcggat caccattacc tgattgagaa gaaagaaact gcgggaaaga
      781 cgaagactct tgtccgaaag cttgcggcgg agcagcggac ggaagaaatt gcacgcatgc
      841 tgagcggagc cgaattgacg gagacgtcgc ggcaacatgc tgagcaactg ctgaaagcta
      901 atgcctgaag acaatcgccg cgatcgcccg tgatcgcaac gtaatcgccg tgatcgggca
      961 aacaaggatc ttacgcgggg cggtcccgat gggaagcacg agcgaggcgc tgaaagactc
     1021 ggcggcaaac tgctatctgt ttgcttctgc tggtcacgtc cgcaattcgg gctgcccgag
     1081 tgatcctacg gtgatgtagt ttcccgcggc ccactatgcc gcagagccgc agagggagcc
     1141 ctccccgttc gccccgcaat cgctgccaat cgctgataaa tacaggtgtt tcagggggtt
     1201 aagtgctgtc atagcgagca gcaggggata acctagatgc tgggaaaggt gtctaaaagg
     1261 ttataatcac cagaacacat gactgctcaa aacggtaaga ccttgatcct gcttaagccc
     1321 cgaggcttct gtgccggggt ggtacgtgcc attgatatcg tgcggattgc gctcgatgcc
     1381 tttggcccgc cgatttatgt ccgcaaggaa atcgtccaca accgttatgt ggtggaggac
     1441 ctgaaacaga agggcgccat ttttgtggac gaggtggacg aagttccgga cggccagcga
     1501 ctgatctact cagcccacgg tgttgcaccg agcgtgcgcg atgccagcaa gctgcgcaac
     1561 ctgaaggtga ttgacgccac ctgcccgctg gtgaccaagg tccacgtgga agcggtgaag
     1621 tacgccaagg gcggttacag cattattttg attggccacc acgaccacga cgaagttgta
     1681 ggaactctgg gcgaagctcc ggaagtcact caggtggtgg gcagcgccgc agaagtcgaa
     1741 cagcttgagg ttccagaccc cacgcgtatc gcttacatca cccagaccac gctgagcctg
     1801 gatgaaacca aggacgtgat tgacgcgctg cggaagaagt tcccgctcat tgaagggccg
     1861 catgcgcagg acatttgcta tgccacccag aaccgccaga cggcggtgaa ggacgttgcg
     1921 caccaggctg aattgctgct ggtggtgggt tcagaaaaca gctcgaattc aaaccggctg
     1981 gtggaggttt ccaccaatct ggggacggac tcttacctga ttgacgcagc caaagacata
     2041 aagcccgagt ggctggcgac cgtgaacacg gttgcgctga ctgccggcgc atcagctccg
     2101 gaagttctgg tggagcaggc agtggaagtt ctcaaaggac acgggttcac caacatccgc
     2161 gaggtggagg tcatgccgga gaatgtccgg tttggactgc cgcccgaaat cgtggaggca
     2221 atcgcggcag ctcctgccgc ttcgggggac tagcctatga gcgctaagtt tgaagggcat
     2281 cccgcgcaga tgctgttcgg aaaaattgaa ggcatgctcg gccgcgtaag cagcgggatt
     2341 gataaagccc gcgactacct gttcggccaa cagcatgaag atggctactg gtgcggcgag
     2401 cttgaagccg acaccacgct tgagtctgac tacatcgcca ttcacaccct gctggggacc
     2461 ggcaacaagc agcgcatgga gcgcgcggta ccggagatca ttcgccatca gaacgaagac
     2521 ggcggctggc ctatttatgc aggcgggcct tcaaacatca gtgcctcagt aaaggcgtat
     2581 ttctcgttga agctcatggg catgggcccg gaccatccgg tgctggaacg ggcgcgcacg
     2641 cgcattcttg aaatgggcgg cgttactgag tgcaacactt tcaccaagat ttacctgtgc
     2701 ttcctgggcc agtatgactg ggaagccgta ccggcggttc caccggagat cgtgctgttc
     2761 ccgaactggt tctggttcaa catctacgag atcagttcgt ggtcccgcgc catcctcatc
     2821 ccgctctcg
//
LOCUS       DASQYP010000206         8204 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_50020, whole genome shotgun sequence.
ACCESSION   DASQYP010000206 DASQYP010000000
VERSION     DASQYP010000206.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 8204)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8204)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8204
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_50020"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(181..1095)
                     /locus_tag="VE783_06580"
     CDS             complement(181..1095)
                     /locus_tag="VE783_06580"
                     /inference="COORDINATES: protein motif:HMM:NF012780.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CBS domain-containing protein"
                     /protein_id="HYX53097.1"
                     /translation="MKVRDIMTSEGLATATLDTTLTEISTRMRDENVGAIPIVDEEDR
                     LAGIITDRDIVIRGIAAGEDPNECTAEDILSEELHTIHPEADIEEAADLMANRQIRRL
                     PVVEDEIIIGMISLGDIAVKSDEDASDALEDISEGVREAGKGQGGTANRAAAGRKQSA
                     GEQVAQEEADYQRKGGRQTGGTRAENATGARSRNASQSQQSVDNDLVDLEGEEEPELA
                     NAGGGGQSRQRANQQSSARGRQNASIRGRDSGELRESASRSQSQSKSRSQGASNRSAS
                     EENKRQQKVTEMRPDSRAAKSRSKRKAG"
     gene            1410..1970
                     /gene="efp"
                     /locus_tag="VE783_06585"
     CDS             1410..1970
                     /gene="efp"
                     /locus_tag="VE783_06585"
                     /inference="COORDINATES: protein motif:HMM:NF001810.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003746 - translation elongation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006414 - translational elongation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor P"
                     /protein_id="HYX53098.1"
                     /translation="MSIPATQMRPGMIIKHNNDLHLVFTVEHRTPGNLRAFIQAKLRN
                     IRTGAMFEHRFRSADPIDKITVDEIPMEFLYQDGDDYYFMNTENYEQTHLTRETLGDA
                     VEYLTPNLQIKVEFYDGKAVGIELPQTVVLTVVETEPGLKSATASSVTKPAKTETGLV
                     VQVPPFINEGEKIKVDTAEGAYLSRA"
     gene            1976..2254
                     /locus_tag="VE783_06590"
     CDS             1976..2254
                     /locus_tag="VE783_06590"
                     /inference="COORDINATES: protein motif:HMM:NF012911.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acylphosphatase"
                     /protein_id="HYX53099.1"
                     /translation="MIARTYIVRGRVQGVGFRWFVDHEARILGLSGWVRNNIDGTVEV
                     LAMGNEQQHAALYSKLQRGPRAARVDEVQTAPAHPIEGLTTFRIEGAW"
     gene            2261..2794
                     /locus_tag="VE783_06595"
     CDS             2261..2794
                     /locus_tag="VE783_06595"
                     /EC_number="2.4.2.7"
                     /inference="COORDINATES: protein motif:HMM:NF002634.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003999 - adenine
                     phosphoribosyltransferase activity [Evidence IEA];
                     GO_process: GO:0009116 - nucleoside metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenine phosphoribosyltransferase"
                     /protein_id="HYX53100.1"
                     /translation="MATNCDHLKTLIREVPDFPKPGILFYDITTLLKDKVGFATLIDA
                     LSEHYLNAQVDLILAIEARGFIFGPALAYRLNAGFVPIRKPGKLPAEKVRWTYDLEYG
                     KDTLEIHKDAIKPGQRVIIVDDLLATGGTANACVALAKSLGAQIAGLSFVVELDFLNG
                     RKKFDGTEIFSLLHYDK"
     gene            2808..3239
                     /locus_tag="VE783_06600"
     CDS             2808..3239
                     /locus_tag="VE783_06600"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53101.1"
                     /translation="MIRSLVLCLLLFGALCSATASDETATRKLIDQVNATSSPSRTGP
                     YQMSAKLLINPHTNNEETGQWKFFRDEDRYRVELQIGSYQEIQVHDGNKLFISRTPGH
                     FPLPGLRLLTHPEQIWQVLAPPDASLGRVSPKQAGAVLCFR"
     gene            3227..3766
                     /locus_tag="VE783_06605"
     CDS             3227..3766
                     /locus_tag="VE783_06605"
                     /inference="COORDINATES: protein motif:HMM:NF015506.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="energy transducer TonB"
                     /protein_id="HYX53102.1"
                     /translation="MFSIERQGSSQSIEYCAASNNQTIISRKSTSLKVALGNYLQLRA
                     GYLPGSIEITYLNPKRHFVFEDLQVQELPPAAELFAAPQGAREFETCEYPRSANFINP
                     ITPKLSLPSSGTARIFFHFVVGKDGSVSDLKIFSPAGSAAEEAGRKAVSQWRFSPATC
                     DGHPIASEMDFDASLSPHP"
     gene            3769..4947
                     /locus_tag="VE783_06610"
     CDS             3769..4947
                     /locus_tag="VE783_06610"
                     /EC_number="2.3.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013884.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyltransferase"
                     /protein_id="HYX53103.1"
                     /translation="MEGRPNRRPEDHKRKPRVAGIDVLRGLCIIAVVIHHINLRFRFD
                     KTDLGRMLWPGANHVLFWSGYYGVRVFFVISGFLITTWSLKRWGKLQELNRRQFYAMR
                     FARIVPCLAALLVLLSTLHFFHLPQFTINPQKTTLLRALFAAIGFHVNWLEAKVGYLP
                     AAWDVLWSLSVEEVFYLGFPLLCTLIRRQWLLVGAFIAFIVAGPFARVLLNDLWSDYG
                     YAASMDGIAFGCLAALLCAPVRLSAVAERVMFWSGVALMLLIEVFRPVAAKIGFYKVG
                     LDVTVLEIGTALLLIVLQQKAAVGGQPSRLSKTFSAPLEWFGRISYEVYLTHMLVVWP
                     MVYAYRASGQGAGWQPLWFAGITLLCGAAGYAVARWYSEPANGAIRARLMAKKSTAAG
                     "
     gene            complement(4990..6234)
                     /gene="megL"
                     /locus_tag="VE783_06615"
     CDS             complement(4990..6234)
                     /gene="megL"
                     /locus_tag="VE783_06615"
                     /EC_number="4.4.1.11"
                     /inference="COORDINATES: protein motif:HMM:TIGR01328.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0018826 - methionine gamma-lyase activity
                     [Evidence IEA];
                     GO_process: GO:0009087 - methionine catabolic process
                     [Evidence IEA];
                     GO_process: GO:0009093 - cysteine catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methionine gamma-lyase"
                     /protein_id="HYX53104.1"
                     /translation="MNSKKPLGMATRAIHSGYDPLRYEGALNPPVFMTSTYAFPDAET
                     GSSRFAGRENGYIYSRMGNPTVAVLERRIADLEGAEGAVGTASGMGAITAAIWSLVQS
                     GDEIVSDMTLYGCTYSYFVHGLARFGVSTNFVDLTQPEQLERAITPRTRLVFFETPCN
                     PNLRVIDIARVTEIAHSFGVPVIVDNTCCTPMLQRPLELGADIVVHSATKYLGGHGDL
                     LAGLVCGRSEAIERVRMQGVKDLTGAVMSPMDAFLILRGLKTLELRMERHCASALELA
                     QRLQNHPAVTQVLYPGLSSFPQHEVARRQMSGFGGMIAFEIKGGLPATYRFMDSLELV
                     TRAVSLGDADSFIQHPASMTHSAYTPQERAHHGITDGMLRLSVGLENVEDILNDLVQA
                     LSASQHERSEVQELSDVVSLIE"
     gene            6461..6649
                     /locus_tag="VE783_06620"
     CDS             6461..6649
                     /locus_tag="VE783_06620"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system HicB family
                     antitoxin"
                     /protein_id="HYX53105.1"
                     /translation="MERETDGRWIAGITDMPGVMAYGATSEEACANVYALALRVVADR
                     VQDSQKLPETITLARAAG"
     gene            6956..>8204
                     /locus_tag="VE783_06625"
     CDS             6956..>8204
                     /locus_tag="VE783_06625"
                     /inference="COORDINATES: protein motif:HMM:NF013314.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HYX53106.1"
                     /translation="MQKFTEQYDVVVVGAGHAGCEAAMAAARMGLKTALFTLNVDLIA
                     QMSCNPAVGGIAKGHLVREVDALGGIMGEVTDAVGIQFRLLNTSRGPAVWSPRAQCDK
                     QQYRLKMREVLESQPNLKIKQAEVAELIVEEIGSSDHRAIGPADEASSSPSAAEGGHA
                     QHTRARGIRLRDGRTVGGDAVIITTGTFLNGLIHCGEQTYPAGRSGEPPSQLLGESLK
                     LMGLRGCRLKTGTPPRLDGRTIDWSRFELQPGDADPTPFSFRTKRITQKQVPCHIAFT
                     TEETHRIIRENVHRSPMYSGQIKSIGPRYCPSIEDKIVKFPDKLTHQLFLEPEGLNTH
                     EIYVNGMSTSMPIDVQLAVIKSVPGLETAEMLRPGYAIEYDSIDPTELHRTLEVKKIE
                     RLFLAGQINGTSGYEEVACHGFAP"
BASE COUNT         1640 a         2341 c         2490 g         1733 t
ORIGIN      
        1 gggagtaagg agcagtgcca gtaccgcacc gatgcccgcg ccaatggcga tgaacatgag
       61 cgcgttgcca atccccgggc cgccggaggc gtttaactcc tgctgcgagt aatctccgta
      121 tttctggtat tcattcatgc attttcctcc tatgaacttg ggtagccgtt cctgtgtttc
      181 ttagcctgct ttccgcttgc tgcggctctt ggcggcgcgg gagtcgggcc gcatctccgt
      241 gactttctgc tggcgcttgt tctcttctga agcggagcgg ttcgaagcac cctgactacg
      301 cgatttggat tgcgattgcg agcgcgatgc ggactcacgc aactcgccgg aatcacgccc
      361 gcgaatggaa gcgttctggc gcccgcgtgc actgctctgc tggttggcgc gctggcgcga
      421 ttgtccgccg ccgccggcgt ttgccagttc aggctcttct tcgccttcaa ggtcaaccag
      481 atcgttatcg acgctttgct gactttggga ggcattgcgg gagcgagctc cggttgcgtt
      541 ttccgcgcgg gtgccgccgg tctggcgtcc gcctttgcgc tgataatctg cttcctcctg
      601 agccacctgc tcgcctgcgg actgcttgcg cccggctgcg gcgcggttcg cggtaccgcc
      661 ctggcctttt ccggcttccc gcacgccttc agagatgtct tccagcgcgt cagaggcgtc
      721 ttcgtcggat ttaaccgcga tatcgcccag cgagatcatg ccgatgatga tttcatcttc
      781 tacaacgggc agacggcgaa tttggcggtt ggccatcagg tcggctgcct cttctatatc
      841 ggcttcagga tggatggtat gcagttcctc gctcaagatg tcttccgcgg tgcattcatt
      901 cggatcttca ccggcggcga taccccggat gacgatgtcg cggtccgtga tgattccggc
      961 caggcggtct tcctcgtcca cgatgggaat ggcaccgacg ttttcatcgc gcatacgagt
     1021 tgagatttca gtgagtgtgg tgtcgagagt ggcggttgcc aggccctctg atgtcatgat
     1081 gtcgcggacc ttcatggctt ctccttcgca ttgcagcttt cagctgtggc ggctgccgca
     1141 tacttagaaa aggcgcggaa gggctgcgtt gtccttaagc agaactgcgg caggaaatgt
     1201 ttttcccgct ccgccgctgc agtcccagcc ggggatgctg taaaatttag ggtttgcgtc
     1261 aggattgtgg atcggcgcgt gtagcgcgct ccgattcacc tacgctccag cgctggccct
     1321 ccattcgctg ctatcggcag ttggtccggg gtgaaagcgc ctgcccagaa tccatcagag
     1381 ctacaagagt taaggagaca gttcagagca tgtcaattcc agcaacacaa atgcgcccgg
     1441 ggatgatcat caagcacaac aatgacctgc acctggtatt cacggtggag catcgcactc
     1501 ccggcaacct gcgcgccttt atccaggcca agctgcgcaa catccgcacc ggcgccatgt
     1561 tcgagcaccg tttccgctcc gctgacccca tcgacaagat caccgtggac gaaattccta
     1621 tggagtttct ctaccaggac ggcgacgact actatttcat gaacacggag aactacgagc
     1681 agacgcacct gacgcgtgag acgctgggcg acgccgtgga atacctcaca ccgaacctgc
     1741 agatcaaagt ggagttctat gacggcaagg ccgtgggtat tgaactgccg cagaccgtgg
     1801 tgcttaccgt cgtcgagacg gagcccggcc ttaagtcggc gaccgcgtcc agcgtgacca
     1861 agcctgccaa aaccgagact gggctggtgg tgcaggtgcc gccgtttatc aacgaaggcg
     1921 agaagatcaa ggtggacacg gcggagggtg cgtatctctc tcgcgcctag cattcatgat
     1981 cgccagaact tacattgttc gcggacgagt gcagggcgtg ggtttccgct ggttcgtgga
     2041 tcacgaagcc cggatcctcg gcttgtcggg ctgggtccgc aacaacattg acggtaccgt
     2101 agaagtcctg gccatgggga acgagcagca gcacgcggcc ttgtactcca agctgcaacg
     2161 cggcccgcgc gccgcacgag tggacgaagt gcagaccgcg ccggcgcatc cgattgaagg
     2221 gctaaccaca tttcgaattg aaggagcctg gtagagcctg atggccacca actgcgacca
     2281 cctgaaaaca cttatccgcg aagttccgga ttttcccaag ccgggaattc tgttttacga
     2341 catcactacg ctgctgaaag acaaagtcgg ctttgccaca ctgattgacg cgcttagcga
     2401 gcactacctg aacgcgcagg ttgaccttat tcttgccatt gaggcgcgcg gcttcatctt
     2461 cgggccggcg ctcgcgtatc ggctgaacgc gggttttgtt ccgattcgca agccaggcaa
     2521 gctgccggcc gaaaaagtcc gctggaccta cgacctggaa tacggcaagg acacgctgga
     2581 gatccataag gacgccatca agcccggcca gcgcgtgatc atcgtggacg acctgcttgc
     2641 gaccggcggc accgcgaatg cctgtgtggc gctggcgaaa tcgctgggcg cacagattgc
     2701 aggcctatca ttcgtggtgg aactcgattt cctgaatggc cgtaagaaat ttgacggcac
     2761 ggagatcttc tcactgttgc attacgacaa gtaggggaac gcgtacgatg attcgctctc
     2821 tggtcctttg tctcctgtta ttcggtgctc tctgttccgc cactgcttca gacgagactg
     2881 ccacccgcaa gctgatcgac caagtgaacg cgacttccag tccgtcgcgc accggtccgt
     2941 accagatgtc ggcaaagctc ttgatcaacc cgcatacaaa caatgaggag acgggccagt
     3001 ggaaattttt tcgggacgaa gatcgctacc gcgttgaatt gcagatcgga agctaccagg
     3061 aaattcaagt acatgatgga aataagctct tcatcagtcg tacgccaggt cattttccgt
     3121 tacccggact gaggctgctc acgcatccgg aacaaatctg gcaggttctg gcccccccag
     3181 acgcttctct cggtcgcgtt tcaccgaagc aagcgggagc cgtactttgt tttcgataga
     3241 gcgccaaggg tccagccaga gtatcgaata ttgcgcggct tcaaacaacc agacgatcat
     3301 cagccgcaag agcacctcgc tgaaagttgc attaggaaac tatcttcagt tgcgggcagg
     3361 ctacttgccc ggaagcattg aaattacata tctgaatcct aagcggcact tcgttttcga
     3421 agacttgcaa gtgcaggagc ttccccccgc ggcagagctc tttgctgcgc cgcaaggtgc
     3481 ccgcgaattc gagacttgcg aatacccaag atcggcaaac ttcatcaatc ccatcacgcc
     3541 aaagttatca ttgccttctt caggaactgc cagaattttc ttccattttg tggtcgggaa
     3601 ggacgggtct gtttctgacc tgaaaatctt ttcgcctgcg ggctcggcgg cggaagaagc
     3661 gggccggaag gcagtctctc agtggagatt cagccctgcc acctgtgacg gacaccccat
     3721 tgcgtcagaa atggatttcg acgcgtcttt gagcccacac ccgtgaggat ggaaggtcgg
     3781 cccaatcggc gtccggaaga tcacaagaga aagccacggg tcgccggtat cgacgtgctg
     3841 cgcgggctgt gcatcatcgc tgtcgtaatc catcacatca atctgcggtt ccggtttgat
     3901 aagaccgatc tcggcaggat gttgtggccc ggcgctaatc acgttctttt ctggagcggt
     3961 tactacgggg tgcgcgtgtt ctttgtgatc tcgggatttc tgatcaccac gtggtctctc
     4021 aaacgttggg gaaaactgca ggagctcaac cggcggcagt tctatgcgat gcgcttcgcg
     4081 cgcattgtac cgtgcctggc ggcgctgctg gtgctgctgt ctacccttca ttttttccat
     4141 ctgccgcagt tcaccatcaa tccgcagaag accacactgt tgcgggcgct gtttgccgca
     4201 attggctttc acgtgaactg gctggaagca aaagttggtt accttcccgc ggcgtgggac
     4261 gtgctgtggt cactctcggt ggaagaagtt ttctaccttg gctttcccct gctgtgtacg
     4321 ttgattcgcc ggcaatggct gctggtgggc gcattcatcg ctttcattgt ggctgggccg
     4381 ttcgcgcgcg tgctcttgaa tgacctttgg agcgattacg gttacgcggc gtcaatggac
     4441 ggcatcgcat tcggctgcct ggctgcgctg ctgtgtgcgc cggtgcggct gagtgcagtg
     4501 gcagaaagag tgatgttctg gtccggcgtg gcgctgatgt tgttgattga ggtcttccgg
     4561 ccggtggcgg cgaagatcgg cttctacaaa gttgggctcg acgtgaccgt gctggagatc
     4621 ggcactgctt tactgctgat tgtgttgcag cagaaagcgg cagttggcgg gcagccgtcg
     4681 cggctctcta aaaccttttc cgcgccgctg gaatggttcg gccgcatcag ctacgaagtt
     4741 tatctcacgc acatgctggt ggtctggccc atggtgtacg cgtatcgcgc aagcgggcaa
     4801 ggagcgggct ggcagccgct ttggtttgcg ggaatcacgc ttctttgcgg agcggcggga
     4861 tatgcggtgg cgaggtggta ttcggagcca gcaaacggcg caatcagagc gcggctgatg
     4921 gcgaagaagt cgaccgcggc ggggtgagaa gagcagcatt cagcactcat cttccatcct
     4981 ctaacgcctc tactcaatca acgaaaccac atcactcagc tcctgtactt cgctgcgctc
     5041 gtgttgcgat gcgctcagcg cctgcaccag gtcgttcaag atatcttcca cgttctcaag
     5101 ccccacggag aggcggagca tgccatccgt gatgccgtgg tgcgcacgct cttgcggcgt
     5161 gtaggcggag tgggtcatgg aggcgggatg ctggatgaag ctatcggcgt cgcccaggct
     5221 tacggcgcgg gtaaccagtt cgagcgagtc catgaaacga tacgtggcgg gcaagccgcc
     5281 cttgatctca aaggcgatca tgccgccgaa gccggacatc tgccgccgcg cgacctcatg
     5341 ctgtgggaag ctggataggc cgggataaag cacttgagtg accgcaggat ggttttgcag
     5401 tcgctgcgcg agttccagcg ccgaggcgca gtggcgctcc atgcgcagct caagcgtctt
     5461 gagcccgcgc agtatcagga atgcgtccat gggtgacatt acggcgccgg tgaggtcctt
     5521 cacgccctgc atgcgcacgc gttcgatcgc ttcgctgcgg ccacagacca gcccggcgag
     5581 cagatcgccg tggccgccca gatatttggt ggccgagtgg acgacgatgt ccgcgccgag
     5641 ttcaagcggg cgctggagca tgggcgtgca acaagtgttg tccacaatca caggcacgcc
     5701 gaagctgtgc gcgatttctg tgacgcgcgc gatatcgatg acccgaaggt tgggattaca
     5761 cggcgtttcg aagaagacca gccgggtgcg cggcgtgatg gcccgctcta attgctccgg
     5821 ctgcgtgagg tcaacaaagt tagtgcttac gccgaagcgc gcgagcccgt gaacaaaata
     5881 ggagtaggtg cagccgtaca gcgtcatgtc ggagacaatc tcgtctcccg attgcaccag
     5941 gctccagatg gcagccgtga ttgcgcccat accgctggcc gtgcccacag cgccttctgc
     6001 gccttccaga tcggcaatcc ggcgctccag gacggcgacc gtcgggttgc ccatgcgcga
     6061 gtagatgtag ccgttctcgc ggccggcaaa gcgggaagag ccggtctcgg cgtcaggaaa
     6121 ggcgtaggtt gaggtcatga aaacgggagg gttcagcgcg ccttcataac gcagcgggtc
     6181 atacccggag tggatggcgc gggtggccat gccgagcggc tttttggagt tcatggcaga
     6241 gtcctcctaa catgccagcg tatctcctgc cagcagaggg agaatgtgtc cggcgtcacg
     6301 agggggcggc aattgttttc aacacatgct gttacagctt gtcttaccag cgacttacgt
     6361 cactaaccaa gttgtacaac ttgacgtaat atgcaacatc gaatactttt tggccacaaa
     6421 aaagccaccc cggggagcaa agttgcagct cactatcgaa ttggaacgtg agaccgacgg
     6481 tcgctggatc gcgggaatca ctgacatgcc tggtgtcatg gcatacggcg cgaccagcga
     6541 agaagcgtgc gccaacgtct atgctctggc tttgcgggtg gtagctgaca gggtgcaaga
     6601 ctctcaaaaa cttcccgaaa ccatcactct ggcgcgcgcc gccgggtgag ccactggcca
     6661 tcaacaaaag cgaagcgggt ccttagcgca ctgctcagga ttggctggat ctggccaccg
     6721 ggaaaaggca gcgcttcatc tcatgtgaca ctaaagcaca aagattaaca agtacccgcc
     6781 ttatacccgg gcttaggacg atagtgatga aatcgggcca aagatgttgg ctcgtattgc
     6841 caagcacaca gggctgacgc ccgaagatct ctgatcgtca aaaccgctct ccgtccgaac
     6901 tgtgctttac ttgccgcttc gcgagcttcc cttcaaaata gatagattac gcgaaatgca
     6961 gaaattcact gaacaatacg atgtcgtcgt ggtgggagcc gggcatgccg gctgcgaggc
     7021 cgccatggct gccgcccgca tggggctgaa gactgccctg ttcacgctta acgtggacct
     7081 gattgcccag atgtcgtgca atccggcggt gggcgggatt gccaagggcc atctggtgcg
     7141 cgaggtggat gcgctgggcg gcatcatggg cgaagtaacc gacgccgtgg ggatccagtt
     7201 ccgtctgctg aatacttcgc gcgggccggc ggtgtggtcg ccgcgcgcgc agtgcgataa
     7261 gcagcagtac cggctgaaga tgcgcgaggt tctggagagc cagcctaatt tgaagatcaa
     7321 gcaggcggaa gtggccgagc tgatcgtgga agaaatcgga tcatcggatc atcgagccat
     7381 cgggccagcg gacgaggcgt cgtcttcccc gagcgcggcc gagggcggcc acgctcaaca
     7441 taccagagcg agaggtatca ggctcaggga tgggagaacg gtcggagggg acgccgtcat
     7501 catcaccacg ggaacgtttc tcaacgggct gatccactgc ggcgagcaga cgtatcccgc
     7561 agggcgcagc ggagagccgc cttcgcaact gctgggcgag tcgctcaagc tgatggggct
     7621 gcggggatgc cggctaaaga ccggaacgcc gccgcgcctc gatggacgca ccatcgactg
     7681 gtcgcgtttt gagctgcaac ccggcgacgc cgacccgacg ccgttcagct tccgcaccaa
     7741 gaggatcacg cagaagcagg tgccctgcca cattgcgttt accactgagg agacgcaccg
     7801 gatcatccgc gagaacgtgc atcgctcgcc catgtattcc gggcagatca agagcattgg
     7861 cccgcgctac tgccccagca ttgaagacaa gatcgttaag tttccagaca agctcacgca
     7921 ccagctcttt ctggaacccg aggggctgaa cacgcacgaa atctacgtga acggcatgag
     7981 cacctccatg ccgattgacg tgcagctggc ggtgatcaag tccgttccgg ggctggagac
     8041 ggcggagatg ctccggccgg gctatgcgat cgagtacgat tcgattgatc ccaccgagct
     8101 ccatcgcacg ctggaagtaa agaagattga gcggctgttc ctggccggtc agatcaacgg
     8161 aacgtcagga tatgaagagg tggcctgcca tggattcgct cccg
//
LOCUS       DASQYP010000207        13822 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_115050, whole genome shotgun sequence.
ACCESSION   DASQYP010000207 DASQYP010000000
VERSION     DASQYP010000207.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 13822)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13822)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13822
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_115050"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..310)
                     /locus_tag="VE783_06630"
     CDS             complement(<1..310)
                     /locus_tag="VE783_06630"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53107.1"
                     /translation="MLARAALVVVMFYIVLCVYAWSASDGLIFQAQPSSYGDTPEILK
                     VHSGNGKQLSALYLQNPSADYTLLVSHGNAEDLGDDRDWLELLRQQGFSVFAYDYEGY
                     G"
     gene            523..2313
                     /locus_tag="VE783_06635"
     CDS             523..2313
                     /locus_tag="VE783_06635"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53108.1"
                     /translation="MKPARAPLTLTQSQQFKATVSGTTNTAVVWAVDGITGGNSTVGT
                     ISSAGLYHAPSAKGTHKITAKSVAASTVVGSATAWITDYPGMFTYHGDKFRSGVNLQE
                     YALTSSTVKTSTFGKLFTRTVDGQIYAQPLYMANLTISSVKRNVVFVATQHSSVYAFD
                     ADGRTTSPLWKRSFINPTAGITTISKPSNGLISPEISISSTPVIDKTTGTLYVAVSTR
                     ENGSIVHRLHALSITSGAEKFGGPIKIQGSVPGTYPALASNGRVPFVASQHLQRPALL
                     LLNGNVYIAYGSNGDALPYNGWLFVYSAAGTNVLHQVAVFCTSPNKGASAIWQSGDGP
                     AADPSNNIYIATGNGAFDLNSGGPDAGNTVLKLALQSGALVKLDYFTPFDQSTLTSDD
                     LDLGAGGPILPPTQSGAAAPSLVIVGGKDGKIYSINRSNMGKFNSTANQDVQTIAVGN
                     PEPTNGLFATPAAWKNLLYIGEVNQPLHLFTFSSGLLSTAPTASTANTFLYPGTSPMI
                     STNGTSGVVWTLDLHAYVGGTPDGGINTAGPAVLHAYSATDLHELYNSSQAGTRDTAG
                     KALKFTSPTVANGHVYVGAAGELDVYGLLP"
     gene            2594..4027
                     /locus_tag="VE783_06640"
     CDS             2594..4027
                     /locus_tag="VE783_06640"
                     /EC_number="1.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR03026.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-glucose/GDP-mannose dehydrogenase family
                     protein"
                     /protein_id="HYX53109.1"
                     /translation="MKIAVVGSGYVGLVAGACFAELGHQVILVDNDEQKLAALQKGEC
                     PIHEKFLPELLERHHRQRLSFTGDLAEAVRRSQMIFIAVGTPPKEDGDADLSYVESVA
                     KEIALVIDDYKVIVEKSTVPVYTNGWIRKIMLLNGATAELFDVASNPEFLREGTAVAD
                     FLYPDRIVVGADTERCAEMVAQAYKPLVDGSYYNQPDSIPGPITGPFKARLIRTSAKS
                     AELIKHASNAFLAMKISFINAVASVCEAVGADVEQVCEGLGSDSRIGRRFLRPGVGYG
                     GSCFPKDLLAFRAVARENGYPFGLLDEIVKVNEEQRVRFLRKVKKALWTLKGKKLGVL
                     GLAFKNGTDDIRESPAIWIVKALLKEGCSVTAYDPAAMERAAEEFPAGSVKFAADPYS
                     AVQGADACLLLTEWEDFCALDLPRLKKLLRYPIVVDGRNLFKPAQMEAAGLNYYSVGR
                     PDVTGGRRLEKPIDIVIKPTVREDEAA"
     gene            4090..5055
                     /locus_tag="VE783_06645"
     CDS             4090..5055
                     /locus_tag="VE783_06645"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012745.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HYX53110.1"
                     /translation="MLSVVVPIYNEEENVTRFHEALEATLDGIGLEWEVVYVNDGSRD
                     SSLLLLMQAQQRDPRVTVVDLSRNFGHQAALTAGLNVARGDAVVLMDGDFQDPPEVLP
                     RMVRTWEKGAKVVIAERTSRAEKGIRGKLFPLFYRIMHWVSDFPIPLNAGIFGLLDRQ
                     VVDTINRLQEGNRYLPGIRSWVGFPTAFVTYDRADRAAGEPKQTFIRLFKYAMDAIFS
                     FSYKPLRLGLAVGGLAIGLALLLMLASVLHAFFGTSIFLAFELNTVAILFIGGIQLLC
                     IGLLGEYIGRIYDEVRRRPLYVIHKVHSGAASRRVEVHGVQSSVA"
     gene            5226..6242
                     /locus_tag="VE783_06650"
     CDS             5226..6242
                     /locus_tag="VE783_06650"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53111.1"
                     /translation="MKQILRLLTVSFALAAASFAGVTVSSPATGTTTGSPVHVVASAS
                     STSPITGMRVYVDNVSAYSVSAAKIDASIAMSQARHNVMVQAWDSTGAVFKQALTITV
                     SGTSPTPTPTPTPVPGLPTPPTTAVVKSNIDQMTGWASCTVCAGIGANGPAATFSMVE
                     NQASPSLDGHSAKFSISGTTPYSDALWWKQLGADNTRSNFKYDVYFYLTNSNLPQALE
                     FDVNQSDGLHKFIFGTQCSPRGDHAFDTWDNANAKWVTTGITCAPPTAFVWHHLTWEF
                     KRNSTQVIFVGFTYDGVTHYLNRATNARASSAKEINVAFQMDGDFAMHAYSVWLDKVS
                     LTEW"
     gene            6427..7509
                     /locus_tag="VE783_06655"
     CDS             6427..7509
                     /locus_tag="VE783_06655"
                     /inference="COORDINATES: protein motif:HMM:NF037015.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ig-like domain-containing protein"
                     /protein_id="HYX53112.1"
                     /translation="MKAKNLLLSLCLLLSLGSAAFAGVTVSSPTNGATVTTPVKIVAS
                     ATSTSRITGMKIYVDNVSVYSTTAASISTSLAMTQAKHNVVVQAWDSTGTVFKTPLTL
                     TVSGTTPIPTPTPTPTPKPPPTPTPAPSPSPTPTPVPPLPTPPSTAVVHSNIDQLTGW
                     QSCTVCAGAGGSGPSATFSLVQNQTSPSLDGNSAKFSISGTIPYSDALWWKQLGADST
                     KTNFKYDLYFYLTTPQNAQTLEFDANQGDGVHHFIFGTQCSIRNHKTWDTWDNATLSW
                     KPTSIPCAQPTAFAWHHLTWEFKRTATSTIFVGFTYDGVTHYINRTSSAKLQNLNEID
                     VAVQLDGNSQMLPYSMWLDKMTLTAW"
     gene            7762..8490
                     /locus_tag="VE783_06660"
     CDS             7762..8490
                     /locus_tag="VE783_06660"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53113.1"
                     /translation="MLGSKIKLNIFAIAFCVMFALAAHSSAAAQVTFSNIDQMTGWGN
                     CTVCAGIGASGPVASYSLVENQASPSLDGHSAKFSIGGSTPYSDALWWKQLGARNSTA
                     NFTYDVYFYLKSPQYAQALEFDVNQSNGAHKFIFGTQCNIKNGAQFDIWDNANARWVH
                     TGIACNMPSAYKWHHLTWNFKRTSTQVIFVSVTLDGVTHYVNRSNNARSSGANELNIA
                     VQMDGDYAMHSYQMWVDKATLKAW"
     gene            8778..9491
                     /locus_tag="VE783_06665"
     CDS             8778..9491
                     /locus_tag="VE783_06665"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53114.1"
                     /translation="MKTLVNRSAMVILGLVLASAMMSAQSTKTSIQAMTGWQSCTVCA
                     GMGANGPSATYSIVQNQASPSLSGHSARFSISGKTPYSDALWWKQLGAHNTATHLKYD
                     VDFYLATPQYAQNLEFDNNQAIGNIKFIFGTQCNIRNRGDWDVWDTKGNAWRPTGIPC
                     HAPSAYKWHHLTWNFKRDGSKNYFVSLTLDGVTHYVNRSYYGKPVSASMLDVAFQMDG
                     DYAMHGYHVWLDNVKLTYW"
     gene            9656..10387
                     /locus_tag="VE783_06670"
     CDS             9656..10387
                     /locus_tag="VE783_06670"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53115.1"
                     /translation="MAQIAKSRFGIMYALALAAVFTLSAISAQAQQTKSNIQAMTGWQ
                     NCTTCAGSGGAGPSAPHSMTQFQSSPSITGKAAKFWLGGSTPYSDALWWKQLGAANGT
                     THHIYDVYFYIKTPQYAQTLEFDSNQAVVNKKWIYGTQCSIKNHHDWDVWDTKGAAWR
                     QTGIPCSAPSAYKWHHLTWEFKRDGSKNYFISVTLDGVKHYVNKSYYAKTVYASMLDV
                     AFQMDGDNHQDDYMVWLDKVSLKSW"
     gene            10607..11692
                     /gene="recA"
                     /locus_tag="VE783_06675"
     CDS             10607..11692
                     /gene="recA"
                     /locus_tag="VE783_06675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017978889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0008094 - ATP-dependent activity, acting
                     on DNA [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0009432 - SOS response [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase RecA"
                     /protein_id="HYX53116.1"
                     /translation="MADERTEKTKAIDLALAQIEKQFGKGSIMRLGTKEAIVPISVIS
                     TGSISFDAALGVGGFPRGRVVEIFGPESSGKTTIALQVVAEAQKAGGMAAFVDAEHAL
                     DPIYAKKLGVDVDNLLVSQPDFGEQALEIAEALVRSNAIDVLVIDSVAALVPKAELEG
                     EMGDSHVGLQARLMSQALRKLTAIVAKSRTCLVFINQIREKIGVMFGNPETTTGGRAL
                     KFYSSVRVDIRRIGAIKDGDVVVGSRTKVKVVKNKTAAPFREAEFDIMYGEGISREGD
                     LVDLGVDKGLVEKSGAWFSYKTDRIGQGRENAKQFLKDNPDIRTKLEVELRRELGLKA
                     MVPEPPEVAPEQKQAVAAAHGKTAARK"
     gene            11838..12311
                     /locus_tag="VE783_06680"
     CDS             11838..12311
                     /locus_tag="VE783_06680"
                     /inference="COORDINATES: protein motif:HMM:TIGR02284.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PA2169 family four-helix-bundle protein"
                     /protein_id="HYX53117.1"
                     /translation="MPEKDDVLDLIEDLIETCKDGETGYAHAAGVVSDPNLKAYFSEQ
                     SLERARCIAELSEASRRLLGERPEKSGSVAATLHRVWFEAKADIGLGDQAILNSVEQG
                     EDSAKKAYEKALAAELPDELRHLVQRQAKRVIAAHDHVRDLRDGNITENRERRVA"
     gene            12395..13588
                     /locus_tag="VE783_06685"
     CDS             12395..13588
                     /locus_tag="VE783_06685"
                     /inference="COORDINATES: protein motif:HMM:NF012488.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class V-fold PLP-dependent
                     enzyme"
                     /protein_id="HYX53118.1"
                     /translation="MLHTGRHFLQIPGPTNVPDRVLRAMDRPIIDHRGPEFQELGREV
                     LEGVRSIFQTSGPVVIFPSSGTGAWEAAIVNTLSPGDRVLMFETGHFSSLWKQVAEKH
                     GIAMDYVPGNWRRGASPEITEERLREDWQHSIKAVMVVHNETSTGVTSRIAEIRRAID
                     RAQHPALLMVDTISSLGSMEYRHDEWGVDVTVGGSQKGLMLPPGLSFNALSEKARAAA
                     RQAQSHRYYWDWEEMLKPNEEGFFPYTPATNLLYGLREAITMLHEEGLSNVFARHARH
                     GQATRAAAQAWGLEIVCQDSREYSNSLTALFVPDGYNADELRGVILDNFDMSLGTGLS
                     KLARRVFRIGHLGHFNDLTLAGSLCGVEMGLRLTGIPHQPGISAAMDVLVKAARKPEA
                     AMAHK"
     gene            13588..>13822
                     /locus_tag="VE783_06690"
     CDS             13588..>13822
                     /locus_tag="VE783_06690"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53119.1"
                     /translation="MPTPGQTPNLVPLPPSSHAKPVDSFAEAAELERALRRTIKGEVR
                     LDRGSRALYATDGSNYRQIPIGLVIPRDDDDVRA"
BASE COUNT         3037 a         4109 c         3833 g         2843 t
ORIGIN      
        1 ttccgtatcc ttcgtagtca taggcaaaga cggagaagcc ctgctggcga agcagttcca
       61 gccagtcgcg gtcgtccccc aggtcctctg cattgccgtg gctcaccagc agggtgtagt
      121 ccgctgaagg attttgaagg tatagcgcgg aaagctgctt gccgttaccg gagtggacct
      181 tcagaatctc aggagtgtca ccgtaagaag aaggttgcgc ctggaagatc agtccgtcag
      241 aggcgctcca ggcgtagacg cacagaacaa tgtaaaacat gacgactacc agggcggctc
      301 tggccagcat ttttgcggaa cctcatcaca gcacactcgg gatgaacgcg caaaccgtga
      361 attcatgcgg aatttcacct tacttccagc atccccgcat ggagtggcag attccaaacg
      421 agcaggacct ctgttatgaa gccacgcctc ttctctgccg caaccatctg ccttttcgcg
      481 tgtttgttag cgcccgctgc ttttgcagcc gtcaccgttt cggtgaaacc agctcgagcg
      541 cctcttactc ttacccagtc tcagcagttt aaagctaccg tttcagggac cacgaacacc
      601 gccgtggtct gggctgtgga tgggattacc ggcggtaact cgaccgtcgg caccatctcc
      661 agcgcgggtc tctaccatgc cccctcagcc aagggcacgc acaagatcac cgcgaagagc
      721 gtcgccgcct ccactgtcgt agggagtgcg accgcgtgga tcaccgatta tccaggcatg
      781 ttcacctacc acggagacaa gttccgcagc ggcgtgaatc tccaggagta cgcgcttacc
      841 tcctctacgg taaagaccag caccttcggc aagctgttca cgcgtacggt ggatggccag
      901 atttacgcgc agcccctgta tatggcgaat ctgaccatca gcagcgtgaa acgtaacgtg
      961 gtttttgtgg ccacgcagca ctccagcgtt tatgcctttg acgctgatgg gcgcaccacc
     1021 tcgcccttat ggaagcgcag ctttatcaat cccaccgccg gtatcacaac gatttccaag
     1081 ccgtcgaatg gcctgatttc accggagatc agcatcagca gcacgcccgt tatcgataag
     1141 acaaccggca cactctatgt ggccgtctcc acgcgggaga acggcagcat cgtgcatcgg
     1201 ctgcatgcgc tcagcatcac ttccggagcg gagaaattcg gcggacccat taaaatccag
     1261 ggctcggttc cgggtactta tccggcgctt gccagcaacg gtcgcgttcc tttcgttgct
     1321 tcgcagcatc tgcagcgtcc ggcgctgctg ctgctgaatg gcaacgtcta tatcgcctac
     1381 ggttccaatg gtgacgccct gccttacaac ggctggcttt ttgtttatag cgctgctgga
     1441 accaatgtcc ttcaccaggt cgcggtcttc tgcaccagcc cgaataaggg tgcttccgca
     1501 atctggcaaa gcggtgacgg cccggcggcc gatccttcaa acaacatcta tatagccact
     1561 gggaacggcg ccttcgactt gaacagtgga ggcccggacg ccgggaacac cgtgctgaag
     1621 ctggcgctcc agtcgggcgc tttggtcaag ctcgattatt tcactccctt tgaccagtcc
     1681 accctgacct ctgacgatct tgatcttggc gcgggtggcc ccatcctgcc tcccacccag
     1741 agtggcgctg ccgcgccctc actggtgatc gtcggcggca aagatggaaa gatctacagc
     1801 attaaccgca gcaacatggg taagttcaac tcaaccgcca atcaagacgt acagactatc
     1861 gcggtcggta acccggagcc gaccaacggt ctgttcgcaa cgccggccgc gtggaagaac
     1921 cttctttata taggtgaggt gaatcaaccg ctgcatctct tcactttctc cagcggattg
     1981 ctttccaccg cgcccactgc gagcacagca aacacgtttc tgtatccggg cacgtcgccc
     2041 atgatttcca ccaacggaac gtcgggcgtc gtgtggacgc tggacctgca tgcctacgtt
     2101 ggcggaacgc cagatggcgg cataaatacg gccgggcccg ccgtgctgca tgcgtactcg
     2161 gccactgatt tgcacgaact gtacaacagt tcccaggcgg gcacgcggga cacggcagga
     2221 aaggcgctca agttcacctc tcctacggtc gccaatggac acgtctatgt aggcgcggca
     2281 ggagagctcg atgtgtatgg gctgctgcct taggacggga gtgctacgcg tcacagaagc
     2341 cactcaggcc gagtgtgact ctgaatcagt tcggttgtga cgagcggcaa cggtggcaaa
     2401 aatgttttcc ggagagcgct ggcgaggacg tttggccgca gggtttcaat gacttccgtg
     2461 gtatttacca aatgttaact gacatcctca tcagcagttc tcacatccaa gaattttagt
     2521 gcagctctgt tgcttgtctg ctcaggaaca gagttggtga agcgcttact tcgtattaat
     2581 cggggtccca gggatgaaga ttgcagttgt cggatcaggt tatgtaggac ttgtcgccgg
     2641 cgcatgcttt gccgaactcg gccaccaggt catcttggtg gacaatgacg aacaaaagct
     2701 ggctgcattg cagaagggcg aatgccctat ccatgaaaaa tttcttccgg aattgctgga
     2761 acgtcaccac agacaacgcc tgagttttac cggagacctg gccgaagccg tccggcgcag
     2821 ccagatgatc ttcatcgcgg taggaacgcc gcccaaggaa gatggcgacg ctgacctttc
     2881 ctacgtggaa agtgtagcca aggaaattgc gcttgtgatt gacgattaca aggtaatcgt
     2941 ggaaaagagc acggtccccg tttacaccaa cggctggatt cgcaagatca tgcttctgaa
     3001 cggcgccacg gcggaattat ttgacgtggc ctcaaatcct gagttcctcc gcgaaggcac
     3061 ggcggtggcg gattttctct atcctgaccg gattgtggtg ggtgccgaca cagaacgttg
     3121 cgctgagatg gtggcacagg cgtacaagcc ccttgtggat ggaagctatt acaaccagcc
     3181 ggatagcatc cccggcccaa tcacgggccc ctttaaggcc aggctgatcc ggaccagcgc
     3241 caagagcgca gagctcatca agcatgcatc caacgcgttc ctggctatga agatctcttt
     3301 catcaacgcg gtggcatccg tgtgtgaggc tgtaggcgca gacgtggaac aggtgtgcga
     3361 agggctgggc agcgactcgc gcattggaag gcgcttcctt cgtcccggtg tgggctatgg
     3421 cggttcctgt ttccccaaag acctgcttgc cttccgtgcg gtagcacgtg agaacggtta
     3481 ccccttcgga ttgctcgatg agatcgtgaa ggtcaacgag gaacagcgcg ttcgtttcct
     3541 tcgcaaagtg aagaaggcgc tctggacact caaaggcaag aagctgggcg tgcttgggct
     3601 ggccttcaag aatggcactg acgatattcg tgagtcaccc gccatctgga tcgttaaagc
     3661 cctactgaaa gagggttgca gcgtgactgc atacgatccc gccgcgatgg aacgcgcggc
     3721 cgaggaattc cctgcgggaa gcgtgaagtt tgcggctgac ccgtattcag cggtccaggg
     3781 cgctgatgcc tgcctgctgc ttacggagtg ggaagatttc tgcgctctcg acttgccgcg
     3841 cctgaagaag ctgttgcgct atcccattgt cgtagatggc cgcaacctgt tcaagccggc
     3901 acaaatggaa gccgccgggc tgaattatta cagcgttggc cggccggatg ttaccggagg
     3961 ccggcgcctg gaaaagccga tcgatattgt gattaagccc actgtcaggg aagacgaagc
     4021 ggcctgatct ctccgtggtc ggctgtgcat tttgaagttc actaattcgc ttttagagtc
     4081 cactgagcca tgctttcagt agtggtccca atttataacg aagaagaaaa cgtcactcgc
     4141 ttccacgagg cgctggaagc gactctggat ggcatcggcc tcgagtggga ggtcgtctac
     4201 gtcaatgacg gcagccggga ctcctcgctc ctgctcctca tgcaggctca gcagcgcgac
     4261 cctcgcgtca ccgtggtgga tctctctcgc aacttcggcc accaggcagc acttaccgcc
     4321 gggctcaacg tggcgcgtgg cgatgccgtg gtcctgatgg atggcgactt ccaggacccg
     4381 ccggaagtcc tcccccgcat ggtgcggacc tgggaaaagg gcgcaaaagt cgtgattgcg
     4441 gagcggacca gccgggctga gaaagggatt cgcggcaagc tgtttccgct cttttacagg
     4501 atcatgcatt gggtatcgga tttcccgatt cccctgaatg ccggaatctt cggcttgctc
     4561 gataggcaag tcgtggacac gatcaaccgc ctccaggaag ggaaccggta tttgcccgga
     4621 atccgttcct gggtgggttt ccctactgcc tttgtcactt atgatcgtgc cgatcgcgcg
     4681 gccggcgagc cgaaacagac cttcatccgg cttttcaaat acgccatgga tgccatcttt
     4741 agctttagtt acaagccgtt acggctgggc ctggcggtgg gcgggctggc gatcgggctg
     4801 gcgctcctgc tcatgctggc ctcggtgctc catgcgttct tcggtaccag catttttctt
     4861 gctttcgagc tgaataccgt ggccatcctc ttcatcggcg gaatacaact cctgtgtatc
     4921 ggcctactgg gggaatatat tggccgtatt tatgacgaag tccgccgtcg cccgctctat
     4981 gtgatccaca aagttcacag cggggcggcc tcccggcgcg tggaagtgca cggcgtgcaa
     5041 agctccgtcg cctgagtcgc tctccaggct tcccctgtac tcccggccag tgaactttag
     5101 aactattaag aagtattacg cttcaatacc cgtctacctt aggcgccacc cttatccaag
     5161 cagagtagat gaacccgtac tttctccctc gacagaatta atgacttagt tcgaaggagg
     5221 ggtacgtgaa acaaattctt cgcctcttga ccgtgagttt tgcattggca gcagcgtcct
     5281 ttgccggtgt cacggtcagt tccccggcaa ctggcacgac tactggatcg ccggtgcacg
     5341 tggtggcctc cgccagctca acttcgccca taactggcat gcgggtttac gtggataatg
     5401 taagcgcgta tagcgtctcg gcggccaaga tagatgcctc catcgcgatg tcgcaggcca
     5461 ggcacaacgt catggtgcag gcatgggact ctaccggcgc ggtcttcaag caggctctta
     5521 ccatcaccgt gagcggcact tctccgactc cgactcccac acctacccct gtgccgggac
     5581 tccccacgcc gcccaccacc gctgtagtca aaagcaacat cgatcagatg accggatggg
     5641 ccagttgcac cgtttgcgcc ggaattggag caaacggccc tgcagcaaca ttctccatgg
     5701 ttgagaacca ggcttcgcct tcgctggacg gccactcggc caagttcagc atcagcggga
     5761 ccacgcccta ctctgacgcc ctctggtgga aacagctggg cgctgacaac accaggtcga
     5821 atttcaagta cgacgtctac ttctatctga cgaactcgaa tttgccccag gcgcttgagt
     5881 tcgatgtgaa ccagtctgac ggccttcaca agttcatctt cggtacccag tgcagcccgc
     5941 gcggcgacca cgccttcgat acgtgggaca acgccaatgc caaatgggtt actaccggca
     6001 tcacctgcgc tcccccgacg gccttcgtgt ggcaccactt gacctgggag ttcaagcgga
     6061 actcgacgca agtgatcttc gttggcttca cctatgacgg agtcactcac tacctgaacc
     6121 gtgcgactaa cgcacgagcc tccagcgcaa aagaaattaa cgtggctttc cagatggatg
     6181 gtgacttcgc catgcacgcc tactcggtct ggctggacaa agtctccctg accgaatggt
     6241 aagcacgttt taagaccagc gctccatgag tgcaaaaggc agggagcatt ccccgctccc
     6301 tgccttgtaa gtcccccagt tgattttgat cgccatgagt tgcggcgccc ggtgcaccac
     6361 cagagtgcag gttggcgacg agcagttgca gtaaggcccc aggaacattc aattttggag
     6421 ttttctatga aggcaaagaa cctgttactc tccctctgtc tgctgctctc gctgggatcg
     6481 gcagccttcg caggcgtcac ggtcagctcg cccacgaacg gcgccaccgt aaccaccccg
     6541 gtcaaaattg tggcgtcggc cacctccacg tccaggatta ccgggatgaa gatctacgtg
     6601 gataacgtaa gtgtctattc caccactgca gccagcatca gcacgtcgct tgcgatgacg
     6661 caggccaaac ataatgtcgt ggtgcaagcc tgggattcta ccggcaccgt tttcaaaacg
     6721 ccattgacgc ttaccgtaag cggaaccacc cccattccaa ctcccacccc cactccgacc
     6781 ccgaagccgc ccccgacgcc caccccagct ccttcgccca gcccaactcc cactccggtt
     6841 ccaccgctgc ccaccccccc ttccacagcc gtggtccaca gcaatatcga tcagctgact
     6901 ggctggcaga gttgtaccgt atgcgccggt gctggtggca gcggcccttc cgcaacgttc
     6961 tctctggtgc aaaatcagac gtcgccgtcg cttgacggca actccgccaa gttcagcatc
     7021 agcggaacca ttccttattc ggacgcgttg tggtggaagc agctcggggc cgatagtact
     7081 aagacgaact tcaaatacga tctttacttt tatctcacca ccccgcaaaa tgcgcagacc
     7141 ttagagttcg acgcaaacca gggagatggc gtccatcact tcatcttcgg gacccaatgc
     7201 agcatccgca accacaagac ctgggacacc tgggacaatg caacgctgag ctggaagccc
     7261 acgtcgattc cgtgtgcgca gcccaccgcc tttgcctggc accacctcac atgggaattc
     7321 aagcggaccg ccaccagcac gatttttgtt ggctttacct atgacggggt gacgcactat
     7381 atcaaccgga cttcgtcggc gaagctgcaa aacctgaatg agattgacgt ggctgtccaa
     7441 ttggacggta attcccagat gctgccttac tccatgtggt tggacaagat gaccctcaca
     7501 gcgtggtagc taagcaacag cagttgcgca taaaactgaa cggtggactc taaggtgaag
     7561 ggcggcttga gggccgccct tcagcatttt gcggtaatac cccaacctta aaacccgcgt
     7621 aatcctctcg tcccgctttt ttcaggtact caggaaaaaa ggttgagcca gagttgatgg
     7681 ctcgatactt tcaaacctgc ccgggcaacc cgggaccgaa aaagagcacg ttaaaaaatc
     7741 ccctggagaa aacagagaga gatgctcgga agcaaaatca aactgaatat tttcgcaatc
     7801 gccttctgcg tgatgtttgc gctcgccgca cattcttccg ctgcggcaca ggttactttt
     7861 tccaacattg accagatgac tggctggggc aattgcacgg tctgcgccgg catcggcgcc
     7921 agcggccccg tggccagcta ttctctggta gaaaaccagg cttctccctc tctggacgga
     7981 cattcggcaa agttcagcat cggcggcagc accccttact ctgacgcgtt gtggtggaag
     8041 caactcggcg cccgcaactc aactgcgaat ttcacctacg acgtctattt ttacctgaag
     8101 agcccgcagt acgcgcaggc tcttgaattc gacgtgaacc agagcaacgg cgcccacaag
     8161 ttcatcttcg gcacccagtg caatatcaag aacggcgctc aattcgacat ctgggataat
     8221 gccaatgccc gctgggtcca cactggcatc gcctgcaaca tgccttcagc gtacaagtgg
     8281 caccacctga cgtggaattt caagcggacc agcacgcagg ttatcttcgt gagcgtgact
     8341 ctggatggcg tgacgcacta cgtgaaccgc agcaataatg cccgctcctc cggagccaac
     8401 gaattgaata tcgccgtgca gatggatggc gattacgcca tgcacagcta ccagatgtgg
     8461 gtggacaagg ccaccctgaa agcctggtag aactacaagc acggcagcgc ccgcactccc
     8521 ccggcgggca tgctattgcg gtgccactta catacagcat caggcatcgc gatgaacagg
     8581 ccggctctgc ggttccgaac gcagagcgcg aactaagagc cggccctact acttgactaa
     8641 tccggtcaat ggcctttttt cagcagcact gaaaaaacgg ttgcggcgga gtagaaggct
     8701 ctttagattc caacgttcgc accggtaaaa accgggcggg aaaaaaagcc taaagaaatc
     8761 tggagtaatt gttccaaatg aagactctcg taaacagaag cgcaatggta attctcggtc
     8821 tggtgctcgc aagcgcaatg atgtcggccc agtccaccaa gacatccatc caggccatga
     8881 ccggctggca gagctgcacc gtctgtgcag gaatgggcgc gaatggccca tcggcgactt
     8941 actcgatcgt gcagaaccag gcgtcgccct cgctgagcgg ccattcggca aggttttcca
     9001 tcagcggcaa gacgccctac tccgatgcgc tgtggtggaa gcagcttggc gcgcacaaca
     9061 ctgccaccca tctgaagtat gacgtggatt tttacctggc gaccccgcag tacgcccaga
     9121 acctggaatt cgacaataac caggcgatcg gaaatatcaa gtttatcttt ggcacccagt
     9181 gcaatatccg caatcgcggt gactgggatg tctgggacac gaagggaaac gcctggcgac
     9241 ccaccggcat tccctgccat gccccctccg cgtacaagtg gcaccacttg acgtggaatt
     9301 tcaagcgcga cggaagcaag aactacttcg tttctctcac gcttgatgga gtgacgcact
     9361 acgtgaaccg gtcctattac gggaagccgg tgagtgcgtc catgctggac gttgcattcc
     9421 agatggatgg cgattatgcc atgcacggat accacgtctg gctcgacaac gtgaaactca
     9481 cgtattggta gcgcgaaggc ggtgactggc ccggcacagg caaggccaga tctgtaagac
     9541 cgccgtcccc catcgcggcc atcaacaccg cgcacgctga acgtgtgcct gcgcggcgat
     9601 cgacaaaaag caagtcgagc acgatgaaaa aactaccccc tggagttaca agaaaatggc
     9661 tcaaatcgca aagtcccgtt tcggaattat gtatgcactc gccctggcgg cggtgttcac
     9721 cctgagtgcc ataagtgcac aggcacaaca aaccaagtcg aacattcagg ccatgaccgg
     9781 ctggcagaac tgcactactt gcgcgggatc cggcggcgcc ggcccttccg ctccccattc
     9841 catgacgcag tttcagtcct cgccttcaat caccggcaag gccgccaaat tctggctcgg
     9901 cggcagcaca ccctattctg atgccctgtg gtggaaacaa ctgggagccg caaacggcac
     9961 cacccatcac atctacgacg tttacttcta catcaagacc ccgcagtatg ctcagaccct
    10021 ggagttcgac tcgaaccagg cagtggtgaa taagaaatgg atttatggaa cccagtgcag
    10081 catcaagaac caccacgact gggatgtatg ggacaccaag ggtgccgcgt ggcgccagac
    10141 gggaattccg tgcagcgctc ccagcgcgta caaatggcac cacctcacgt gggagttcaa
    10201 gcgcgacggc tcaaagaact acttcatctc agtgactctg gacggcgtga agcactacgt
    10261 caacaagagc tactacgcca agacggtcta cgccagcatg ctcgacgtgg ccttccagat
    10321 ggacggcgat aaccaccagg acgactacat ggtctggctg gacaaggtct ccctcaagtc
    10381 ctggtagagc aaccctcaat ctttctcccc gctgagttgc tcccggaggt cccccggcct
    10441 tcgggagctt tttcttttcc ggccggattt tccacagcaa agcacgtttt ctcttggcgg
    10501 gacgcctttt cttcgcctat aatgtacata taatcgcggc gcgagcaggt gcgttgagga
    10561 ccactcgcaa ttaagcttag agactcggcg atcctcggag agatgaatgg ctgacgagag
    10621 aacagaaaag acaaaggcaa tcgacctggc gctggcccag attgaaaagc agttcggcaa
    10681 gggctccatc atgcggctgg ggaccaaaga ggccatcgtg ccgatctcgg tgatttccac
    10741 cggctcaatc tcgtttgacg ctgcgttggg cgtgggcggc ttcccgcgtg ggcgcgtggt
    10801 tgagatcttc ggtccagaat ccagcggcaa gacgaccatc gccctgcaag tagttgccga
    10861 ggcccagaaa gccggcggca tggccgcgtt cgttgacgca gaacatgccc ttgatcccat
    10921 ttatgccaag aagctgggag ttgacgtaga caacctgctc gtttcgcagc ccgatttcgg
    10981 cgagcaggcc ctggagattg ccgaagctct ggtgcgctcg aatgccatcg atgtgctggt
    11041 aatcgattcc gtggccgctc ttgtacccaa ggcagaactg gaaggcgaga tgggcgacag
    11101 ccacgtcggt ctccaggccc gcctgatgtc gcaggctctg cgcaaactca ccgccatcgt
    11161 ggccaagtcg cgcacctgcc tcgtcttcat caaccagatc cgcgagaaga ttggcgtaat
    11221 gttcggcaac ccggaaacca ccaccggtgg ccgggcgctc aagttctatt cttccgtacg
    11281 cgtggacatc cgccgcatcg gcgccatcaa agatggcgac gtagtggtgg gctcccggac
    11341 caaggtcaag gtggtaaaaa acaaaactgc tgctcccttc cgcgaagccg agttcgacat
    11401 tatgtatggc gaaggcatct cccgcgaagg cgacctggtt gatctcgggg tagataaggg
    11461 gttggtggaa aaatctggcg catggttcag ctacaagact gaccgcattg ggcaggggcg
    11521 cgagaatgcc aagcagttcc tgaaagacaa tccggatatt cgaaccaaac tggaagtcga
    11581 gctccgtcgt gagctgggcc tgaaagccat ggttccggaa ccgcctgagg ttgctcccga
    11641 gcagaagcag gccgtggctg ctgcccatgg caagactgcc gccagaaaat agaacgttcg
    11701 cttctcctgt aaatggatca aaatgcccga ctatctatgt cgggcatttt tgatgcttct
    11761 ccggccagcc ctcgattttc agccatcctg taactgcctt gctcgcctct cactcgcata
    11821 tataaggagg cgcggacatg ccagagaagg atgacgttct ggatctcatt gaagacctca
    11881 tcgaaacctg caaagatggc gagaccggct acgctcacgc ggcaggcgtt gtgagcgatc
    11941 ccaacctgaa ggcctacttc agtgaacaaa gtcttgagcg cgcgcgttgc attgccgagc
    12001 tttcggaggc ttcgcgccgg ctgctgggcg agcggccgga aaaatccggg agtgtagccg
    12061 ccacgctgca tcgcgtatgg tttgaggcca aagccgacat tggactgggc gatcaggcaa
    12121 tcctgaacag cgtagaacag ggcgaggaca gcgccaagaa agcctacgag aaggctctcg
    12181 cggcagagct gccggacgag ctgcgccacc tggtgcaaag gcaggcaaag cgagtgatcg
    12241 ccgcccatga ccacgtgcgc gacctgcgcg acggcaacat cacggagaac cgcgagcgcc
    12301 gggtcgcctg agacggaaca agaattcaaa ccttcagggc acgcattggg cgtgcccttt
    12361 gatttggctg ctaaaggtat agaattttct gcctatgctc cacacgggac gccatttcct
    12421 ccaaattccc ggaccaacca acgttcctga ccgcgtgctg cgggccatgg atcgtccaat
    12481 catcgaccat cgcgggccag agttccagga gctcggcaga gaagtgctcg agggggttcg
    12541 cagcatcttt cagacctcgg gtccggtagt catcttcccc tcgtcgggca ccggagcatg
    12601 ggaagccgca atcgtgaata ccctcagccc gggtgaccgc gtgctgatgt ttgagaccgg
    12661 ccacttttcc tcgctctgga agcaggtagc cgaaaagcac ggaatcgcca tggattacgt
    12721 accaggtaac tggcgccggg gagcctcgcc ggaaattact gaagaacgat tgcgagaaga
    12781 ctggcagcac tctatcaaag ccgtgatggt ggttcataac gagacctcaa ccggcgtgac
    12841 cagccggatc gcggaaatcc ggcgcgccat tgaccgcgcc cagcatcctg cattgctcat
    12901 ggtcgatacc atttcgtctc tgggctccat ggagtaccgt catgacgagt ggggtgtcga
    12961 cgtgaccgtc ggcggttcac aaaagggcct gatgctgccg cccggtctga gcttcaacgc
    13021 actctctgaa aaagcgcgag cggcggcccg gcaggcgcaa tcccaccgct actactggga
    13081 ctgggaagag atgctcaagc caaatgagga aggcttcttc ccctatacgc ccgcaaccaa
    13141 ccttctgtat ggcctgcgtg aggcgattac gatgctgcac gaggaagggc tctccaatgt
    13201 ctttgcccgc catgcccggc acggtcaggc cactcgtgcg gcggcgcagg catggggttt
    13261 ggaaatcgtc tgccaggatt cgagagagta ttcaaattcg cttacggctc tgtttgtgcc
    13321 ggacggctac aacgctgacg aactccgcgg agtgatcctg gacaacttcg acatgtcact
    13381 cggtacgggg ctctccaaac ttgcgcgccg cgtctttcgg attggccatt tgggacattt
    13441 caacgacctt actctggctg ggagcctttg cggggtagaa atgggacttc gcctcaccgg
    13501 aattccgcac cagccgggca taagcgcggc tatggatgtg ctggtcaagg ctgcacgaaa
    13561 acctgaagca gctatggcgc acaaataatg ccgacgcccg ggcagactcc caacctggtt
    13621 ccgcttccgc ccagttcgca cgccaagcca gtagactcgt tcgctgaggc ggcggaactc
    13681 gaacgcgctc tgcgccgcac catcaaaggt gaggtccggt tggaccgcgg cagccgcgca
    13741 ctttacgcca cagatggctc caactatcgc cagattccca tcggtctggt gatccctcgc
    13801 gacgatgatg atgtgagagc tg
//
LOCUS       DASQYP010000208        10564 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_283037, whole genome shotgun sequence.
ACCESSION   DASQYP010000208 DASQYP010000000
VERSION     DASQYP010000208.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 10564)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10564)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10564
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_283037"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            84..1664
                     /locus_tag="VE783_06695"
     CDS             84..1664
                     /locus_tag="VE783_06695"
                     /inference="COORDINATES: protein motif:HMM:NF016845.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail sheath C-terminal domain-containing
                     protein"
                     /protein_id="HYX53120.1"
                     /translation="MPVTPTYPGVYIQEIPSGVRTITGVATSITAFVGRALTGPVNEP
                     TIINSFADFQRTFGDLNSAYPMSYAVQDFYDNGGSEAVIVRLFMPDSSGKSKNTDTGL
                     TLEALYPGKAYDGTTIIIDTTGIDDSVAQGQGLTKADLFNVTVQYQGNGPIEKIRNVS
                     VVEGPRRIDRVLVQESSYLRVHTKADGTPDPALPGNPPNPTDTTKALPALTGGGDSTA
                     LASADYIGDPNKKSGIYALTKTDLFNLLSIPPDTLNGSTDPSVYQKAAELCVSRRAMV
                     IMDPPAAWDANAGTAVQDTVKAVNSSGLAVTGPNARNTAVYFPRLIAPDQARKGLLTS
                     FVPCGAVAGIMARTDAQRGVWKAPAGLDATLNGVPGLTVVMNDDENGQLNQLGVNCLR
                     SFGVAGRVVWGARTARGADSLADEYKYVPVRRTALFIEESLYRGTQWVVFEPNDEPLW
                     AQIRLNVGAFMQNLFRQGAFQGKTPAEAYFVKCDKDTTTQNDINLGIVNIVVGFAPLK
                     PAEFVIVSIQQMAGQIAT"
     gene            1677..2204
                     /locus_tag="VE783_06700"
     CDS             1677..2204
                     /locus_tag="VE783_06700"
                     /inference="COORDINATES: protein motif:HMM:TIGR02241.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HYX53121.1"
                     /translation="MAQFTVNAQRFDPYKNFKFRVKWDGRYVAGISKVGTLKRTTEVV
                     KHREGGDPSTSRKSPGRTEYDAITLDRGVTHDVEFERWANKVWQINGGQQEVSLADFR
                     KDIRIEMYNEAGQLAIAYNVYRCWVSEYQAMPDLDANANAVAIQHIKLENEGWERDQS
                     VTEPTEPSFNVPAVG"
     gene            2209..2940
                     /locus_tag="VE783_06705"
     CDS             2209..2940
                     /locus_tag="VE783_06705"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53122.1"
                     /translation="MRPLSAQQMLAVWERGLDQIPLERALALLEAACPELDRESLARM
                     SIGQRDDCLLRLREWAFGRQVSGCMSCQTCGQPLEAAFTTDSLRHNAGEPGPERVPLS
                     IAGYDLMFRPVNSLDLAACMGVPPSEVARRLFLRCLVSANTAGAEVSGEQVPAELAEP
                     AMDDLTHADPQANLEIISVCGACGASVRECFDVVAFFWSEIDAWARRILREVHLLASA
                     YGWTETDVLSLSSIRRQFYLEMAGA"
     gene            2937..3809
                     /locus_tag="VE783_06710"
     CDS             2937..3809
                     /locus_tag="VE783_06710"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53123.1"
                     /translation="MSELLGSLVARSMGATQTFRPRTPSLFEPTPSTHPAGSPALRFR
                     NNDAAPEEAELDFEGGEAIPRPQLNRTSSQPRQQPTENRNREHESSVREARSFRLDLT
                     LDQRESGKQVSRPEEHAVPPPHAEPASAVTQMKPAIAVSHPAALRPERAEAHAPSRAE
                     SPFHMHPEKAHVEALVPEKQTQAPLSAFFARRISGEKEMKTPSLVPFMPERLRKTAEE
                     TAPAVPNSRRARQRDFSPAVSAPEPVVHVTIGRIEIRAEHQPSPGRRSDRASSAPVMG
                     LEEYLRRKNRRGGE"
     gene            3806..5041
                     /locus_tag="VE783_06715"
     CDS             3806..5041
                     /locus_tag="VE783_06715"
                     /inference="COORDINATES: protein motif:HMM:NF025431.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4255 domain-containing protein"
                     /protein_id="HYX53124.1"
                     /translation="MSNPSAIAAVTLTLQTILGDGVRADAQLNDTTVTLLPPDKARGN
                     NNANQLNLFLYQILPDAAWSNMSIPRQVLPGESGNPPLAIIMHYMLTAFGRDNDVGVP
                     FGHYLLGQAMSVLFDHALLGPDEIRSATSAALPGSDLHKQVERVRITWQPLSLEEISK
                     LWTGLATQYRLSVIYEVSVALIESTRATRAPLPILTRGENDKGIMSQASLLSPFPALD
                     SISFPNQRTVALLGDTLALTGQHLDGAVLGVVFNSPLWSAPVEIVPLAGNTATSLSVT
                     LPNSPATWPAGFYTVQVMVQRPGESFRRSTNLLSFAIAPRITIAPASAPAAANIVFTV
                     TCAPEIRPEQRASLLIGDTEVLADPHAAQTATLTFTVGNLQPGVYFVRLRVDGVDSIL
                     VNRTTTPPSFDTAQRVTVT"
     gene            5038..7179
                     /locus_tag="VE783_06720"
     CDS             5038..7179
                     /locus_tag="VE783_06720"
                     /inference="COORDINATES: protein motif:HMM:NF012234.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HYX53125.1"
                     /translation="MNDVSTWQDGNTRFLSAALQWIRASLEFCANQAQVPGPHLLAAE
                     QAAKESPSFWRSFIRSKPAPGVAAPKLLPGTAHPSADPRVMQAAQAMQKAAEEMNPPP
                     ALAILSRRLGLSEFEQQLLLLCLGIELDPGIASLCSRCQGDEVGRPFPTFALAFSIFE
                     KPSWDALSPERPLRYYRLLEINQPTGQALTVSPLRADERIINYLKGLNYIDDRLAPLL
                     VPVDLNGGSAERPASHRQLTEQIIERFRQTGAGKPLPLVQLLGADSLSKKLVAFDVAA
                     SLGMHLYRLPAPLLPSHAGDLEALARLWQRESLLLPLALYLDASESASEPASTGYGSP
                     VSRFLERTEGSLFLDTRERWPGLARPSISLDVSKPSPAEQEEAWLTALGEGTEAQAEL
                     AAGHFNLSLTEIRRIARQATAEPSSGPEELRDHLWQACVSSVRPQLDALAHRLEPRLD
                     WGDLVLPPAELRLLQQIAEQVAQRSTVYEKWGFSRKMSRGLGISALFAGDTGTGKTMA
                     AEVIASHLRLDLYRIDLSSVISKYIGETEKNLRRLFDAAENGGAILFFDEADALFGKR
                     SEVKDSHDRYANIEINYLLQRMEAYRGLAILATNMKSALDPAFLRRLRFVVNFPFPGA
                     TERKAIWQKVFPSDVPVSGLDFDRLARLNIAGGNIYNIALNAAFMAARTRDPITMPMV
                     LEAARAEFRKLERPINEADFQWKAPGGDAVA"
     gene            7176..7442
                     /locus_tag="VE783_06725"
     CDS             7176..7442
                     /locus_tag="VE783_06725"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53126.1"
                     /translation="MKLYLHIDRLVLDGIPLERTQRGRVRAAVEQELARLLKSGGLAR
                     DLRSGSAVPAVQGRNMHLQKGRQYTDLGRQIAGAVYSGIGNKRK"
     gene            7439..9181
                     /locus_tag="VE783_06730"
     CDS             7439..9181
                     /locus_tag="VE783_06730"
                     /inference="COORDINATES: protein motif:HMM:NF025078.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4157 domain-containing protein"
                     /protein_id="HYX53127.1"
                     /translation="MSSQTATATRTAAPAPAVAAAPPTLHLQRQCQCGQHTLDGAECT
                     DCRGKRTKLLRRENARWRPAFAPPLVGEVLRSPGRPLDTSIRTVMERRFGQDFSSVRV
                     HADASAAESARAVNARAYTLGNRIVFGARQYVPSTHAGQKLLAHELAHVVQQGRSNPQ
                     ILHSHLEVGPAHDPLEQEAEARAEAVMNGRSAGAVSFHSSTTGPARIQRTIGDALEAV
                     GTFLLDVALFIPRLFGLEFFTARDLREYLASIRHRRGPDGGLFSDNKARALVNRENEF
                     GPYSTQDKIWMIQDMLQGHTSFLDERAIITLMRRSVNDRSQIVAALGRDYLWSKFDGR
                     NRRILEALTMTTADAGDALVARLRSLSPEEIQDYSSNATEPTLLESFRRATSLSMITA
                     PIPATAAINQRGEASFTINGIAIIAGPDRIVPAHENHAFTALQLQWGAPEKITVTPEN
                     TNQPVGPFAPTVITGTIWSEFSSEEAKSKSSGYGVGTRPQDTDTLRFHERAHGEAWMR
                     FLQENQPPVFTGTQEMLPAQFNAAIDQWTAAMRAYAAHANDFAMRAGDCVGRLPTDEQ
                     LAGTGYTAAICHQL"
     gene            9202..>10564
                     /locus_tag="VE783_06735"
     CDS             9202..>10564
                     /locus_tag="VE783_06735"
                     /inference="COORDINATES: protein motif:HMM:NF025078.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4157 domain-containing protein"
                     /protein_id="HYX53128.1"
                     /translation="MSGRDNCQLARKNNAASAGQNGVMLQRQCACGQHTGGSGTCDQC
                     KQKELMGELAQRQGDRSSVLASQGDEAGTVPVQTMLRVNEPGDVYEQEADRAATHVMQ
                     RSRFGTPPGSHTGSPLVQRRAAGPGQGVAVSHEVARGIDSLRGGGAPLDAGTRRFMEP
                     RFGHDFSQVRVHTGSSADRLAQSVDALAFTTGTNLVFGEGQYAPRTEKGKNLLAHELA
                     HVVQQDGGHPTPPIMRVSAAQCSKDCTKPDTVGGGIPSVWKVTLAVDMEQKGLGRLVS
                     GNVGHTWVRLADNAGTRYSYGFWPQTGFNAKKPLSSVAGCVHHPDTAHEPPNATSYLE
                     KEYTVPKPQFDHALKLAQSVCAAKPAYNLATYNCTSYAIDLVKAAGMPPPASTTLAIH
                     NPNALYEGIEENRPAGHPGLGALIGGLGGAGIGAAVGSAGGIGGAIAGGLIGGIAGLI
                     GGTL"
BASE COUNT         2203 a         3221 c         3183 g         1957 t
ORIGIN      
        1 agctgtgtgc aggcctcatc tgaccgtcta attctcgttc ttaagcggac aagcaaaaag
       61 gatcgattca aaaggaggct ctaatgccag taacaccgac ttatcccggc gtctacatcc
      121 aggagattcc cagcggggtg cggacgatca cgggcgtagc cacgtcgatt acggcgttcg
      181 ttggacgcgc gctgacgggg cctgtgaatg aacctacgat catcaacagt ttcgcggatt
      241 ttcagcgcac tttcggcgat ttgaattctg cttacccaat gagttacgcc gttcaggatt
      301 tctacgacaa cggcgggagc gaggcagtga ttgtcaggct gttcatgcct gacagctcag
      361 gcaaatccaa gaatactgac actggcttga cgctggaggc gctttatccc ggcaaggctt
      421 atgacggcac tacgatcatt attgatacga ctggaataga cgattccgta gcacaggggc
      481 aggggctgac aaaggccgat ctcttcaatg tgactgtcca gtatcagggt aacggaccaa
      541 tagaaaaaat tcggaatgtc tccgtagttg aaggccccag gcgaattgat cgcgttttag
      601 tgcaggaatc aagttatctg cgggtgcata cgaaggccga cggcacgcct gatcctgccc
      661 tgccgggcaa cccaccgaac ccaaccgaca cgacgaaggc gctgcccgcg cttactggcg
      721 gcggggacag tacggcactg gccagcgctg attacatcgg ggatcccaac aaaaaatctg
      781 gaatttacgc gctgacgaaa acggacctct tcaatctcct gtccattccg ccggatacgc
      841 tcaacggttc cacggatccc tctgtatatc aaaaagccgc tgagctctgt gtttcccggc
      901 gcgcgatggt gatcatggat cctcccgcgg cctgggacgc gaatgctggc acggctgtgc
      961 aggataccgt gaaagcagtg aacagcagcg gtctcgcggt cacgggcccg aatgccagga
     1021 atacagcagt ttactttccg cgactgatcg cgccggacca ggcccgcaaa ggccttctga
     1081 caagttttgt gccctgtggc gctgtggccg ggattatggc gcgcactgat gcacagcgtg
     1141 gcgtctggaa ggcgccggct gggctggacg caaccctcaa cggcgttccg ggccttacgg
     1201 ttgtcatgaa cgacgatgaa aacggacagc tcaaccagct cggcgtgaat tgcctgcgtt
     1261 ccttcggcgt tgcgggccgt gtggtctggg gtgcacgcac cgcacgcggc gctgacagtc
     1321 ttgcggatga atacaagtac gttcccgtgc gcagaacggc gcttttcatc gaagaaagcc
     1381 tctatcgcgg tacgcaatgg gtcgtctttg agcccaatga cgaaccttta tgggcgcaga
     1441 ttcgcttgaa cgtgggcgct ttcatgcaga acctctttcg ccagggcgct tttcagggca
     1501 agactccggc ggaggcgtac ttcgtgaaat gcgataaaga cacgaccacg cagaatgaca
     1561 tcaacctggg catagtcaac atcgtggtgg gatttgctcc gctcaaaccc gctgagttcg
     1621 tcatcgtcag catccagcag atggccggtc agatcgcgac ctaaggagga ataagaatgg
     1681 cgcagttcac agtcaacgca caacgattcg atccgtacaa gaatttcaag ttccgtgtga
     1741 aatgggacgg gcggtacgtg gccggtatca gcaaggtcgg cacgctgaag cgcaccaccg
     1801 aggttgtgaa gcaccgcgaa ggaggcgacc cttccaccag ccgcaaatcg ccgggccgaa
     1861 ccgagtacga cgccattacg ctcgaccgcg gcgtgactca tgacgttgaa ttcgaaagat
     1921 gggccaacaa ggtgtggcag atcaacggcg gccagcagga ggtttcactc gcggacttcc
     1981 gaaaggatat ccgcattgaa atgtacaacg aagcgggcca gttggcgatc gcctacaacg
     2041 tctatcgctg ctgggtttcc gaataccagg caatgccgga cctggacgcg aacgccaatg
     2101 ccgtggccat ccagcacatc aagctggaga acgaaggctg ggaacgagac cagagcgtta
     2161 ccgaaccgac cgagccctcc ttcaacgtac cagcggtagg ctagcaggat gcgtccactt
     2221 tcagcgcagc agatgctggc agtctgggag cgcggccttg accagattcc tctggaacgg
     2281 gccttggcgc tgctggaggc agcctgcccc gaacttgacc gcgagtccct ggcgcggatg
     2341 agcatcggac agcgcgacga ctgcctgctc aggctgcgcg agtgggcttt tggccgtcag
     2401 gtctcaggct gcatgagctg ccagacctgc ggccagccgc tggaagccgc cttcaccacc
     2461 gactcgctgc gccacaacgc gggcgagccc ggaccggagc gggttccgct ttccatcgcc
     2521 ggctatgacc tgatgttccg gccggtaaac agccttgacc tggccgcctg catgggcgtc
     2581 ccgcccagcg aagtcgcacg ccgccttttt ctccgctgcc tggtttccgc caacaccgca
     2641 ggtgcggagg tctccggcga acaggtcccg gctgaactcg ccgagcctgc catggatgat
     2701 ctgacccatg ctgatcccca ggcaaacctg gaaattatct cggtgtgcgg agcctgcggc
     2761 gcaagcgtgc gcgagtgctt tgacgtagtt gcgtttttct ggagcgagat cgacgcctgg
     2821 gcccgacgaa tcttgcgcga ggtgcacttg ctggcctcag cctatggatg gaccgagaca
     2881 gacgtgcttt ccctcagcag catacgccgg caattttacc tggagatggc gggcgcatga
     2941 gcgaactcct cggcagcctc gttgcgcgca gcatgggcgc tacccagaca ttcaggccgc
     3001 gtacaccttc gctgttcgag ccgacaccct ccactcatcc cgcgggatcc ccggccctgc
     3061 gcttccgcaa caatgatgcg gcgccggaag aagcagagct cgacttcgaa ggcggtgagg
     3121 ccatcccgcg gccacaactg aaccgcactt cgtcgcagcc cagacagcaa ccgaccgaga
     3181 accgaaatcg tgagcatgaa tcgagcgttc gcgaggcgcg cagctttcgc ctcgatttga
     3241 cgctggatca gcgggagtcc ggaaaacagg tttcccggcc ggaagaacac gcagtacctc
     3301 cgccgcacgc ggagcctgca tccgccgtta cccagatgaa accggcaatc gctgtgagcc
     3361 atccagcagc gcttcgtccg gaacgcgccg aggcgcatgc gccgagccgc gcggagtcgc
     3421 cgtttcacat gcatccagaa aaggcacacg tggaagcgct tgttcctgag aaacaaacgc
     3481 aagcgccgtt atcagctttc ttcgcccggc gcatctccgg agagaaagag atgaagacgc
     3541 cttctctggt cccgttcatg ccggagcgct tgcgcaagac cgctgaggag acggcacctg
     3601 cagttcccaa tagtcgccgc gcgcgccagc gcgatttttc cccggcggtt tctgcgcctg
     3661 aaccggtcgt gcacgtaacc atcggtcgaa tcgaaatccg ggccgagcac caaccgtctc
     3721 ccggcagaag aagcgatcgc gcctcctctg cgcccgtcat gggtctggaa gagtatttgc
     3781 gccggaagaa caggcgaggc ggagaatgag caacccatca gccatcgcag cggtaacgct
     3841 tacccttcag acgattctgg gagatggcgt cagggcagat gcgcagctca acgacactac
     3901 tgtgaccctg ttgccgcccg acaaggcacg aggcaacaac aacgccaacc agctcaacct
     3961 ttttctgtat cagattttgc ccgacgcggc atggagcaat atgagcattc cccggcaggt
     4021 gttaccgggc gaaagcggca atccgccgct ggcaatcatc atgcactaca tgctcacggc
     4081 cttcggacgc gacaacgacg tgggcgtgcc ctttggccat tacctcctgg gacaggccat
     4141 gagcgtgctg ttcgatcacg ctctgcttgg cccagacgag atcagaagcg ctacctctgc
     4201 cgcgctaccg ggcagcgatc tgcataagca ggtggaacgc gtccgcatca cctggcagcc
     4261 gctctcgctg gaagaaatct ccaaactgtg gacggggctg gctacgcagt accggctctc
     4321 agtgatttat gaagtctcgg tggctctcat cgaaagcacc cgcgccaccc gcgcgccgct
     4381 gccgatacta acgcgtggcg aaaacgataa aggcataatg tcacaggcca gcctgctctc
     4441 gccatttccc gcgctcgaca gcatctcttt cccaaaccag cggacggtgg cgcttctggg
     4501 agacactctg gcactcacag gccagcatct ggacggagct gttttgggcg tggtgttcaa
     4561 ttcaccactc tggagcgcgc ccgtagaaat tgtgccgctt gccggcaata cggccacgag
     4621 cctgagcgtt accttgccga actcacccgc tacttggccc gccggctttt ataccgtgca
     4681 ggtgatggtc cagcgcccag gagagtcgtt ccggcgctcg accaacctgc tctccttcgc
     4741 gattgcgccg cgcatcacga ttgcgccggc cagcgccccg gctgcggcaa acatcgtctt
     4801 tacggtgacc tgcgctcctg aaatcaggcc ggaacagcgc gcctcgctgc tgatcggcga
     4861 taccgaagtt ctggccgatc cgcatgctgc gcaaaccgct accctgacgt tcacggtggg
     4921 caatttacag ccaggagttt acttcgtccg ccttcgcgtg gatggcgtcg acagcatcct
     4981 tgtgaaccgg accacaactc cgccctcctt cgatactgcg cagcgagtga cagtcacatg
     5041 aatgatgttt ccacatggca ggacgggaat acccgctttc tttccgccgc gctgcaatgg
     5101 atacgggcgt cgcttgaatt ctgcgccaac caggctcagg tgcccggccc tcatctgctg
     5161 gcggcggaac aggccgccaa ggaaagccct tccttttggc gcagctttat ccgttcaaag
     5221 ccggccccgg gtgtggcggc gcccaagttg ctgcccggca cggcgcatcc cagcgctgat
     5281 ccgcgtgtaa tgcaggcggc gcaggccatg cagaaggccg cggaagagat gaatccaccg
     5341 cccgccctcg cgattctctc gcgcaggctg ggactttcag aatttgagca gcagttgctg
     5401 cttttgtgcc tcggcattga gcttgatccg ggcatcgcca gcctgtgctc gcgctgccag
     5461 ggtgatgagg tggggcgacc cttcccgacc ttcgcgctgg ccttcagcat ttttgaaaag
     5521 ccttcctggg acgcgctctc gccggagcgc cccctgcgct attaccgcct gcttgagatc
     5581 aaccagccca caggccaggc gctcaccgtg agcccgttgc gcgccgacga acgcatcatc
     5641 aactacctga aaggcctgaa ctacatcgac gatcgactgg ccccgctgct ggtcccggtt
     5701 gatctcaatg gcggctcggc cgagcggccg gcttcgcatc gccagttgac cgagcagatc
     5761 atcgagcgtt ttaggcagac cggggccggc aagccgctgc ccctggtgca gttgctgggc
     5821 gcggattcct tgagcaaaaa attggtcgcc tttgatgtgg ccgcttcgct gggaatgcat
     5881 ctctaccggc tgcctgcccc gctgcttcct tcgcatgcag gcgacctgga agcgctggcg
     5941 cgtttgtggc agcgtgaaag cctgctgctg ccgctggcgc tctatctgga tgcttcagaa
     6001 agcgcgtcag aacccgcctc taccggctac ggatctccgg tgagccggtt ccttgaacgg
     6061 acggaaggat cgctgttcct ggatacgcgc gagcgctggc ccggactggc ccgccccagc
     6121 atttctctgg atgtttccaa gccctctcct gcggagcagg aagaggcgtg gctcactgcg
     6181 ctcggcgagg gcaccgaggc acaggctgaa ttagcggcag gacactttaa tttgagcttg
     6241 acggaaatcc ggcgcatcgc gcggcaggcc acggcggaac cctcttccgg accggaagag
     6301 ctgcgcgacc acctgtggca ggcatgcgta tccagcgtcc gtccccagct ggatgcactg
     6361 gcgcatcgtt tggagccgcg cctggattgg ggagacctgg tgctgcctcc ggccgaactt
     6421 cggctgctgc agcagatcgc tgagcaggtg gcgcagcgct ccaccgttta tgaaaaatgg
     6481 ggcttcagcc gcaaaatgag ccgggggctg ggtataagcg ccctgttcgc cggcgatacc
     6541 ggaaccggca agaccatggc ggctgaagtc attgcttctc acctgcggct ggatctctat
     6601 cgtatcgatc tttcctcagt catcagcaag tacatcggcg aaacggaaaa aaacctgcgc
     6661 cgcctgttcg acgccgccga aaacggcgga gccattcttt tcttcgatga ggcggacgcg
     6721 ctcttcggca agcgcagcga agtcaaagac agccatgacc gctacgcgaa catcgagatc
     6781 aactacctgc tgcagcggat ggaggcctat cgcgggctgg cgatcctcgc cacgaacatg
     6841 aaaagcgcgc tcgatcccgc gttcctgcgc cgcctgcgtt tcgtagtgaa tttcccgttt
     6901 cccggcgcga ccgaaagaaa ggccatctgg cagaaggtgt tcccctcaga cgtgccggtt
     6961 tccgggctgg atttcgatcg gctggcgcgc ctgaacattg ccggcggaaa catatacaac
     7021 atcgccttga atgcggcatt catggccgcg cgcacccgag atcccatcac catgccgatg
     7081 gtgctggagg ccgcgcgggc ggagttccgc aagctggagc gtccgatcaa cgaagcggac
     7141 ttccaatgga aagctcccgg aggcgacgca gtggcatgaa actctatctc cacatcgacc
     7201 ggctggtgct ggacggcatc cctctggagc gcacgcagag gggacgcgtg cgcgcagccg
     7261 tagagcagga gttggcgcgc ctgctgaagt cgggcggact ggcgcgtgat ctgagatcgg
     7321 gcagcgcggt gccggcggtg caaggaagga acatgcattt gcaaaaaggt cggcagtaca
     7381 cggaccttgg gagacagatc gcaggcgcgg tgtacagcgg aatcgggaac aagaggaaat
     7441 gagcagccag actgccacag cgacgcgaac cgcggccccg gctccagccg ttgccgccgc
     7501 tccgcccacg ctccatttac aacgccaatg ccaatgcggg caacatactt tggacggagc
     7561 ggaatgcacc gactgcaggg gaaagcggac gaagcttctg cgccgcgaaa atgcgcggtg
     7621 gcgtcctgcg tttgctcctc cgctggtggg cgaggtgctg cgctccccgg gacggccatt
     7681 ggacacgagc atacgtacag tgatggaaag gagattcggc caagatttca gcagcgtccg
     7741 cgtgcatgcg gacgcttccg ccgccgaatc cgctcgcgcc gtgaatgcgc gggcttatac
     7801 gctggggaac aggattgtat ttggcgcgag acaatatgtc ccgagcacac atgccggcca
     7861 gaaacttctg gcccacgaac tcgcacatgt ggtgcagcag ggaaggtcaa atcctcaaat
     7921 actgcattct catctggaag tggggcctgc ccatgatccc ctggagcaag aagccgaggc
     7981 acgagcggaa gccgtgatga atggaagatc ggcgggggct gtttccttcc actcgtccac
     8041 gacggggccc gcacgcatcc agcgcacgat cggagatgcc cttgaggcgg ttggaacatt
     8101 tctgctcgac gtagcgcttt tcatcccgcg tctattcggt ctggagtttt ttaccgcgcg
     8161 cgacctgcgc gaatatctgg ccagcatccg ccatagacgc gggccggatg gcggcctctt
     8221 cagtgataac aaagctcggg ctctggtgaa ccgggaaaac gaattcggcc cgtatagcac
     8281 ccaggacaag atctggatga ttcaggacat gctgcaaggc catacttctt ttctggacga
     8341 aagagccatc atcaccctga tgagaagatc ggtaaatgac cgctcgcaga tcgtcgctgc
     8401 tctcgggcgg gattacctct ggtcgaaatt cgatgggcga aaccggcgca tcctcgaggc
     8461 gctcacaatg acgacggcag atgcgggcga cgcactggtg gcacggttgc gctctttgag
     8521 tccggaagag atccaggatt attcgagcaa cgcaaccgag ccgacactgc tggagtcttt
     8581 tcgccgagct acctcgctct ccatgattac cgccccaatt ccggccaccg cggccatcaa
     8641 tcagcgcggc gaagcctcgt tcacgatcaa tggaatcgcc attatcgcgg ggcctgaccg
     8701 gatcgttcca gcgcatgaaa accatgcatt tacggcgtta caactgcaat ggggagcgcc
     8761 ggaaaaaatc accgtcacac ctgagaacac caaccagccg gttggcccgt ttgctccgac
     8821 cgtgataacc ggaacgatct ggagcgaatt ttcttcggaa gaggccaaga gtaaatcgtc
     8881 aggctatgga gtaggcaccc ggccgcagga cactgacact ctacgcttcc acgagcgcgc
     8941 ccacggcgaa gcctggatgc gattcctgca ggaaaatcag cctcctgttt ttacgggcac
     9001 gcaggagatg ctgcctgcgc aattcaatgc cgccattgac cagtggaccg ccgcaatgcg
     9061 agcttacgcc gcacatgcga atgattttgc catgcgcgcc ggagactgtg ttggccgttt
     9121 gcccacggac gaacagctgg ctgggactgg ctataccgcg gcaatctgtc atcagctata
     9181 aaatcgcaat cgaaggacaa tatgagcggc agagacaact gccaactcgc acgaaaaaac
     9241 aatgcggcct ccgctggaca gaacggagtc atgctgcagc ggcaatgcgc ctgcggacag
     9301 cacaccggcg gaagcggaac ctgcgaccag tgcaaacaaa aagaattaat gggagagctc
     9361 gcacaaagac agggtgatcg cagctcagtt cttgcctccc agggcgatga ggccggaact
     9421 gtcccggtac aaaccatgct gcgcgtgaac gagccgggag atgtttatga acaggaggcc
     9481 gatcgtgccg ccacccacgt aatgcagcgt tcgcgatttg gaacgccgcc tgggtcgcac
     9541 acgggttcgc ccctggtgca aagaagagca gccggcccgg gacagggagt tgccgtttcg
     9601 cacgaagttg cccgtgggat tgacagcctg cgcggaggtg gtgcgccgct cgatgccggc
     9661 acgcgccgtt ttatggaacc ccgtttcggg cacgatttca gccaggtacg ggtccacacc
     9721 ggaagctcgg cggaccggct ggcccagtca gtcgatgctc tggcatttac caccggaacg
     9781 aacctggttt tcggcgaagg ccagtatgcg ccgcgcacgg aaaagggaaa aaatcttctg
     9841 gcgcacgaac tggcgcacgt ggtacagcag gacggcggtc atccgactcc gccgatcatg
     9901 cgcgtgagcg cggcgcagtg ttccaaggac tgtacgaagc cggacacggt ggggggcggc
     9961 attccttcgg tatggaaggt cactcttgcc gtggacatgg aacagaaagg gctgggccgg
    10021 ctcgtcagcg ggaacgtggg ccacacctgg gtgcggctgg ccgataatgc cggcaccaga
    10081 tacagctatg gattttggcc gcagaccggc ttcaacgcca agaaaccttt gagcagtgtt
    10141 gccggatgcg tccatcaccc cgatacggcg cacgagccgc ccaacgctac aagttatctg
    10201 gaaaaggaat acacggtccc caagccgcag tttgatcacg ccctgaaact tgcgcagtcc
    10261 gtatgcgctg caaaaccggc ctacaacctt gccacgtaca actgtacgtc atatgccatt
    10321 gatctagtga aagcggcggg aatgccgccc ccggcgagca ccacgctggc aatccacaat
    10381 ccgaatgcgt tgtatgaagg cattgaggaa aacaggcctg ccggacatcc gggactaggc
    10441 gctctcatcg gcggccttgg cggcgcagga atcggtgcgg ctgtcggctc ggcgggcggc
    10501 ataggcggcg cgattgctgg cggcctgatc ggtggcatag ccggtttgat tggcggtacc
    10561 ttga
//
LOCUS       DASQYP010000209        14148 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_198571, whole genome shotgun sequence.
ACCESSION   DASQYP010000209 DASQYP010000000
VERSION     DASQYP010000209.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 14148)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14148)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14148
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_198571"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1024
                     /locus_tag="VE783_06740"
     CDS             <1..1024
                     /locus_tag="VE783_06740"
                     /inference="COORDINATES: protein motif:HMM:NF045129.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HYX53129.1"
                     /translation="GQINGTSGYEEAACQGLMAGINAALRVRNEQPLTLDRTEAYTAI
                     LIDDLISKGTNEPYRMFTSRAEFRLHLRIDNADRRLTPYGRRVGLINDEAWTDFQAKQ
                     ERAAKLTVLLEKTRVSGELLEKIEGARQERMTAQRGVISSPEEDGAEMEAATNGNGAS
                     LASAVGAPLAQLLRRPEIVIEDLATVVREGYPEFFAAIAAGSADSSVREHSARRRGGT
                     EHGERTVDDSLHGETLRPSNLSAAARNEMKTVETEIKYAGYLDQQKKSIERLKKAEQR
                     EIPDWFDYGKVSGLSREMNEKLQRVRPRTLGQASRIPGVTPAAVSLINVYIEIQGKKK
                     PLASSC"
     gene            1130..2452
                     /locus_tag="VE783_06745"
     CDS             1130..2452
                     /locus_tag="VE783_06745"
                     /inference="COORDINATES: protein motif:HMM:NF014081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HYX53130.1"
                     /translation="MQRHLLACLVSLLLPCAVFAQKPQQPAPEKIVAIHAATLIDGQG
                     AQPRHNVLIVIRGTRIESVKEGGTAPAGATVINLGPQVTVLPGLIDTHTHIFLQGEDP
                     AEGGYDIQLLKHPVSYRAARATVSVRRALEEGFTTLRDVETEGAGYGDVGIKEAINDG
                     FIPGPRMFVVTRAISVTGGYPLEGYNPDIVVPKGAEIGDGPVQLRKITRDQLDKGADW
                     IKVYMTHRSWVDKQGKLVSQPTLTVEELKAVVDEAHGQQKRVACHAYSGIGLHRALDG
                     GCDSIEHGLSLDDEAISQMLKQGTWYVPTLGVYYLDWAPANTDDGKRDRARANEHEVS
                     FKKALKAGVKIAFGTDMGGVPWTTPIADEFGYMTKFGMSNMDAIKAATSRAADLLEKT
                     GELGVIAPGAYADVIAVQGNPLSNVEALKQVNFVMKDGKVFKHTGATE"
     gene            2455..2949
                     /locus_tag="VE783_06750"
     CDS             2455..2949
                     /locus_tag="VE783_06750"
                     /inference="COORDINATES: protein motif:HMM:NF016139.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF417 family protein"
                     /protein_id="HYX53131.1"
                     /translation="MATAAKRVSGSRAGSSSSSSMAMAFGRIGVGIMFLFFGEYKLVN
                     SEFAREGYTKWVSGFVQESAVSFYKPFLKWTLQHHFLFGYTVGVAELLIGISLVLGLW
                     VRAFSLVGAILMVQLALATWNLPAGTPLWRYAANELEHIPLLFLFLIFFAHRAGETLG
                     LDGR"
     gene            complement(3106..4695)
                     /gene="serA"
                     /locus_tag="VE783_06755"
     CDS             complement(3106..4695)
                     /gene="serA"
                     /locus_tag="VE783_06755"
                     /EC_number="1.1.1.95"
                     /inference="COORDINATES: protein motif:HMM:TIGR01327.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004617 - phosphoglycerate dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0006564 - L-serine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycerate dehydrogenase"
                     /protein_id="HYX53132.1"
                     /translation="MKIVVAEKVAANAVQLLKDEPGWNVLTADQLNGNLRAALADADA
                     LIVRSAVDVNADILRGAEKLRVIGRAGVGVDNIDLEAATKAGIAVMNTPGANAVAVAE
                     HTLALMLALARHLSRADYTTRAGKWEKKSLQGTELRGKTLGIIGLGRIGMEVAKRAKA
                     FEMKIIAHDPFVSASVARELEIELAELDRVLAAADYLSLHVGLTPQTEGMINEQSLRK
                     MKKGVRIINCARGELVNDAGLAEAIKSGHVAGAALDVFTQEPPKDSPLLALENVIATP
                     HIAGSTNEAQDAVGVQIANQVREYLKRGVIQNAVNMPSIDHQQYTQMRPWLGLAEKLG
                     AFLANVVPTSGSIQEILLRYSGRLTEWKTELIRNSAIQGILNQRAAEHANVVNAAAIA
                     QERGIHVHEIRKDKAQSPGDILAVAIKTTAGELEVRGAVVRDSSLRLLGVGSIYIEVP
                     LQGNLIYIRNRDVPGVVGKVGTILGRNSVNIGNLALGRAEHKTGAEAISVVQVDSPAP
                     DVVLKELASLPEVEQVCGVRL"
     gene            complement(4931..6112)
                     /locus_tag="VE783_06760"
     CDS             complement(4931..6112)
                     /locus_tag="VE783_06760"
                     /inference="COORDINATES: protein motif:HMM:NF012488.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine--glyoxylate aminotransferase family
                     protein"
                     /protein_id="HYX53133.1"
                     /translation="MIRKARLFTPGPTQLLPSAQLAMAAATMHHRTAEFRALYTRVLA
                     DLRTFVGTNNDVVMFTASGTGAMEAAVANLTSPGDRVVVVSAGKFGERWEGLAKAYGC
                     QVDTVRAPYGQTITVQQVSTQLKPEHKVLYMQGTESSTGVRHDVQGIAKLLRGTETLL
                     VVDAITGLGTTHFDVDGWGIDVIIGGSQKAVMIPPGLAYSAVSDRAWQHMEKTTNPRY
                     YFDLRKERKNGAKGESAYTPSTALVAALGAALDYVREQGGGDLAAGRKLLVDNAETAA
                     AMTRSAAQALGLKLFSASSPGAALTAIASPDGVDSSDIVKSFRNRFGAVVANGQGEMK
                     GQLFRIAHLGYYDYLDTIAIIGALEQVLVEMGQPVKLGAGLRAAQEVYAESAQAVAAA
                     K"
     gene            complement(6140..7348)
                     /locus_tag="VE783_06765"
     CDS             complement(6140..7348)
                     /locus_tag="VE783_06765"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53134.1"
                     /translation="MSPYAVIFNIAILTAMIGIIVYWIRRFAVLRGYKAMEAEIFAVA
                     GRLNTKPVRAGGDVLLAGTYSKIPTVVRFSHQLDRPGLYIQMRVPATFGLEVMPKTQQ
                     RPVEGRVLMRTGSQQLDARFNARSSQPVEVRMLLSTHEARQALETLCCSSQTGLSIRG
                     QMMELSELTIPSFAAKHVLDHLQAMGELGRRIQEMPGATAIKIEPWPRPANSVVIRVA
                     LALGLVALIALLFAQPYNHPVASGTVGAVAGSSGVDTADASRIPRLTGWHVASADDLR
                     GAVIFLRAHGAPLTGHIRADFSGGVGMHDSAYLLLDPNGQRRLTMLAEGQVLYDAIFP
                     HADALARIPKADLAKIQWTTSPQFVPDGDGLLVIQSAEDPTSSLVLLKHGPQIYSAHP
                     ADYNQIDLSE"
     gene            7447..7902
                     /locus_tag="VE783_06770"
     CDS             7447..7902
                     /locus_tag="VE783_06770"
                     /inference="COORDINATES: protein motif:HMM:NF020977.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GatB/YqeY domain-containing protein"
                     /protein_id="HYX53135.1"
                     /translation="MALTEQIQKDIVDAMRSRDELRLSTLRMVKAALKNKEIDKRAPL
                     DDKEAQQVLSTLIKQRKDSIEQFQKGGRQELADKEAAEIKLIEAYLPKAMGEEEITAA
                     VKATIAEMGSPTMKDMGTVMKAAMAKLSATGARVEGKTVSEIVKKQLGG"
     gene            8144..8692
                     /locus_tag="VE783_06775"
     CDS             8144..8692
                     /locus_tag="VE783_06775"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53136.1"
                     /translation="MVPESNVLQQFFNQLVERNYGEVGVRQPEVHHYVANLLTEFCHA
                     DNLFKIKNDKGRALDDVGEMMLESDPVYGPAPSFDRERQVRKHIGDYTLFFTGMFPES
                     LNRIRLRRQRMEGFIDFVKAGKESYYIVSKFEHYEYAKVAPLFRRMSEEFERLVYGLN
                     QAKNELQEMQHPIARQTRELLM"
     gene            8915..9565
                     /locus_tag="VE783_06780"
     CDS             8915..9565
                     /locus_tag="VE783_06780"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53137.1"
                     /translation="MAQSRLQFVTLSGVPIEVSELKWPFHPSTSGSDWLVLHGRVDLL
                     GSSEGLHAEVAVGMTQTMKESLGSLAQEHAEGLVVNAIRKTIDNGQLAFLKSGKLQPA
                     HVTSRFYSFVTQKIQFPTQNETDVKELIRRRVFWLNKIHDGQQIDVASRYDCEYVNFT
                     QDKMLELARQLAAEGWIRIEGAVATATNKLMQQEPAMVAAMQKAVEAGKAATKVTA"
     gene            9619..9840
                     /locus_tag="VE783_06785"
     CDS             9619..9840
                     /locus_tag="VE783_06785"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53138.1"
                     /translation="MNTEHKLLAIFRKLPPEKQDLVLQCAEGLNSKEPKAPLHSLEGL
                     WEDLNIDLSEEEINQARREMWGNFPRDIE"
     gene            10237..10842
                     /locus_tag="VE783_06790"
     CDS             10237..10842
                     /locus_tag="VE783_06790"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HYX53139.1"
                     /translation="MTQPLLTVEHLNISFATQGGEVAAVRDVSFAIPESGTLGLVGES
                     GSGKSATSLAVMRLLPPQAKITGKIGFNGRDLLALPAEEMRRMRGSGISMIFQEPMTA
                     LNPVMRIGDQVAEAVLAHEKISRRVALDRAVQVLEEVAIPEPGRRSRDYPHQLSGGQR
                     QRVMIAMALINNPRLLIADEPTTALDVTIQAQILQLLSELR"
     gene            10858..11130
                     /locus_tag="VE783_06795"
     CDS             10858..11130
                     /locus_tag="VE783_06795"
                     /inference="COORDINATES: protein motif:HMM:NF019951.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53140.1"
                     /translation="MLFISHDLGVVSRVADHVAVMLAGEIVEVGPVEPIFSAPVHPYT
                     RGLISVIPTLKTDRGRPLATVVKQSPAAQPGAMREVSPGHWARVAP"
     gene            11170..11925
                     /locus_tag="VE783_06800"
     CDS             11170..11925
                     /locus_tag="VE783_06800"
                     /inference="COORDINATES: protein motif:HMM:NF024258.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042578 - phosphoric ester hydrolase
                     activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase family protein"
                     /protein_id="HYX53141.1"
                     /translation="MRILILSDIHANLEALEACLAAAPEHDCVYNLGDIVGYGANPNE
                     VTERSRRLGTVFVRGNHDRACTGLTPLTDFNPIAALAAMWTQQNLTPENLTFLKQLPH
                     GPIAPFDGLRCVHGSPRDEDEYVLMRREAFNILAHVDAPLTFFGHTHVQGGYWIDDEQ
                     DTEGGIEMRYPEGPGPQRMELQLESTGKYLINPGSVGQPRDGDPRAAFASYDTEKILV
                     TYFRVPYDIAGAQKKIFAAGLPERLGVRLEEGR"
     gene            11922..12383
                     /locus_tag="VE783_06805"
     CDS             11922..12383
                     /locus_tag="VE783_06805"
                     /EC_number="3.1.26.4"
                     /inference="COORDINATES: protein motif:HMM:NF012304.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease HI family protein"
                     /protein_id="HYX53142.1"
                     /translation="MTQSSLFSDPPAPRSSGFEVIANVDGGARGNPGPAAYGVVIRDA
                     QGKVVMELSKYLGIQTNNVAEYSGLLAALEYAAQAKYESIKVISDSELLVRQMQGRYK
                     VNHPVLKQLFDKAKLLTESFHLFRIEHVLREKNKDADRLVNEVLDRQAKAR"
     gene            complement(12508..12804)
                     /locus_tag="VE783_06810"
     CDS             complement(12508..12804)
                     /locus_tag="VE783_06810"
                     /inference="COORDINATES: protein motif:HMM:NF012442.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0030261 - chromosome condensation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HU family DNA-binding protein"
                     /protein_id="HYX53143.1"
                     /translation="MASGMTKTQLVRNMAEKLETNNKTAAAFLEHLAETAIKETKKNG
                     VFVIPGLGRLVKSNRKARMGRNPQTGEPIKIAAKTVVKFRVAKAAKDSIAPKKG"
     gene            complement(13091..13642)
                     /gene="rsmD"
                     /locus_tag="VE783_06815"
     CDS             complement(13091..13642)
                     /gene="rsmD"
                     /locus_tag="VE783_06815"
                     /EC_number="2.1.1.171"
                     /inference="COORDINATES: protein motif:HMM:TIGR00095.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0052913 - 16S rRNA
                     (guanine(966)-N(2))-methyltransferase activity [Evidence
                     IEA];
                     GO_process: GO:0031167 - rRNA methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (guanine(966)-N(2))-methyltransferase
                     RsmD"
                     /protein_id="HYX53144.1"
                     /translation="MIAGKYRSRRLAAVEGVDTRPTSDRLRETLFNVVAARVEESVWL
                     DVFAGTGAVGIEALSRGARSVYFIETGAKAARVIRRNLAELGIEDGAEVIERDASTAL
                     RMLDAQAVLADFCFVDPPYRKAAEYEEVLGFLGQSRVLGKESVVIAEHDKHFDPGEEF
                     GALRRTRKLQQGDAVLSFYKLAG"
BASE COUNT         2970 a         4024 c         4298 g         2856 t
ORIGIN      
        1 cggtcagatc aacggaacgt caggatatga agaggcggcg tgccagggtt tgatggccgg
       61 gatcaacgcg gcgctcaggg ttaggaacga gcagccgctg acgctcgacc gcacagaagc
      121 gtacacggcg atcctgattg acgacttgat cagcaagggc acgaacgagc cttaccggat
      181 gttcacctcg cgcgcggagt tccggctgca cctgcgcatt gataacgctg accgccggct
      241 caccccatac gggcggcggg tgggcttgat caacgatgag gcctggacag attttcaggc
      301 gaagcaggag cgcgcagcaa agctgacagt acttctggag aagacgcgtg tctccggtga
      361 gctgctggag aagattgagg gtgcgcggca ggagcggatg acggcacagc gtggtgtgat
      421 ttcgtcgccg gaggaagacg gcgcggagat ggaggcggcg acgaatggga atggcgcgtc
      481 gctggccagc gcggtgggag cgccactggc tcagttactc aggcgaccgg agatcgtgat
      541 tgaagatttg gcgacggtgg tgagggaagg ttatccggag ttctttgccg caatcgcggc
      601 cggcagtgcg gacagctctg tgcgggaaca ttcagcacgg aggcgcggag gcacggagca
      661 cggcgaaaga acagttgatg attcacttca cggcgaaaca ctccggccct caaacctttc
      721 tgcggccgca cgcaacgaga tgaagaccgt ggaaaccgaa atcaagtacg ccgggtatct
      781 tgaccagcag aagaaatcaa ttgagcggct gaagaaagcc gagcagcgcg aaattccgga
      841 ctggttcgat tacggcaaag taagcggcct ctcgcgggag atgaacgaga aactgcagcg
      901 tgtgcgcccg cggaccctgg gccaggcgtc gcgcattccg ggcgtaactc cggcggcggt
      961 gagcctgatc aatgtgtaca ttgagattca gggaaagaag aagccgctgg ccagtagctg
     1021 ctagctgaca cctgcgggta agactttcct cctgctgaac cattccgttt attgccaaac
     1081 atcgccgctt cgagtattca ttatcgccag ccgcttgcgg aggttttcat tgcaacgcca
     1141 tcttcttgcc tgcctcgtgt ctctcctgct cccctgcgcc gtgttcgcgc agaaaccgca
     1201 gcagcctgcg ccggaaaaaa ttgttgccat tcatgccgct acgctgattg atggccaggg
     1261 cgcacaaccg cgccacaacg tcctcattgt cattcgcggc actcgcattg agagtgtgaa
     1321 agagggaggt acggcgccag ccggagccac agtcatcaac ctggggccgc aggtcacggt
     1381 gctccccggg ctgattgaca cgcacaccca catctttctc cagggagagg acccggccga
     1441 aggcggttat gacattcaac tgctcaagca tcccgtttcg taccgcgcgg cgcgcgccac
     1501 cgtttctgtc cggcgtgccc tggaagaggg cttcaccact ttgcgtgacg tggaaacaga
     1561 aggcgcaggc tatggcgatg tgggaatcaa ggaagcgatc aatgacggct tcattcccgg
     1621 gccacggatg tttgtggtca cgcgtgccat ctccgtaacc ggcggctatc cgctggaggg
     1681 ctacaaccct gacatcgtgg ttcccaaagg cgccgagatc ggtgacggcc ctgtgcagct
     1741 ccgcaagatc acccgcgacc agcttgacaa aggcgccgac tggatcaagg tctacatgac
     1801 gcatcgctca tgggtggaca agcagggcaa actcgtctct cagccgacgc tcacggtgga
     1861 agagctgaaa gcggtggtgg atgaagccca cggccagcaa aagcgcgttg cctgccatgc
     1921 ttatagcggc atcgggctgc accgcgcgct tgatggcggc tgcgattcca ttgagcacgg
     1981 cctctcgctg gatgatgaag ccatcagcca gatgctgaag cagggcacct ggtacgtgcc
     2041 cacgctcggt gtctactacc tggactgggc gcctgcgaat actgacgacg gtaagcggga
     2101 tcgcgcccgc gccaacgagc atgaagtctc attcaagaag gcactcaaag ccggggtgaa
     2161 gatcgccttt ggcacggaca tgggcggcgt gccctggact acgccgattg ccgacgaatt
     2221 cggctacatg accaagttcg gcatgtcgaa catggacgcg atcaaggcag ccacatcccg
     2281 agccgccgac ctgctggaaa aaaccggcga actgggcgtg atcgcgccgg gagcctatgc
     2341 cgacgtcatt gccgtgcagg gcaatccact gagcaacgtt gaggcgctca agcaggtgaa
     2401 cttcgtgatg aaagacggca aggtattcaa gcacacaggg gcaacggagt aagtatggcc
     2461 acggcagcaa aacgggtttc gggttccagg gcaggcagtt cgtcctcatc atccatggca
     2521 atggcgttcg ggcgcattgg cgtgggaatc atgtttctct tcttcggcga gtacaagctg
     2581 gtgaacagcg aattcgcccg cgaaggctat accaaatggg tgagcggctt tgtgcaggag
     2641 agcgccgtga gcttctacaa gccatttctg aaatggacgc tgcaacacca ttttcttttt
     2701 ggctacacgg tcggggtggc cgagttactg attggcatct cgctggtgct aggattgtgg
     2761 gtgcgggcat tctcgctggt cggcgctatc ctgatggtgc agctcgccct ggccacctgg
     2821 aacctgcccg cagggacgcc gctgtggcgg tacgccgcca acgagctgga gcatatcccg
     2881 ctattgtttc tgttcctgat cttctttgcc caccgcgctg gcgaaacgct ggggctggat
     2941 ggaaggtgag ttatcggctg gattgagtcc gtccgccttc agtcccgagc gaagcgggga
     3001 tcgctattgt gtttaggttc gttgcgacag gccctcttcg tgtggcttcg tgtcctcgat
     3061 ggtatagggg tccttcgctg acgctcggga ctgagggaga agaatctaca acctcacccc
     3121 acacacctgc tccacctccg gcagcgacgc aagctccttc agcactacat ccggggcagg
     3181 gctgtctacc tgaaccaccg atatcgcttc tgcgccggtc ttgtgttcgg cgcggcccag
     3241 cgcgagattg ccgatattga cgctgttgcg gccgaggatg gttcccactt ttcccaccac
     3301 gcccggcacg tcacggttgc ggatgtagat cagatttccc tgcagcggga cttcaatgta
     3361 gatggatcca acgccaagca ggcgcagcga gctgtcgcga accacggcgc cgcggacttc
     3421 gagttcgccc gctgttgtct tgatggccac ggccaggata tcgccggggc tctgggcttt
     3481 gtccttgcgg atttcgtgca cgtggattcc acgttcctgg gcgatagcgg cggcgttgac
     3541 gacattcgcg tgttcggcgg cacgctggtt caggatgcct tgaatcgcag agttgcgaat
     3601 gagttcggtc ttccactcgg taagccgtcc gctgtagcgg agcagaattt cctgtatgga
     3661 gccggaggtc gggacaacat tggcaagaaa tgcgcccagc ttttccgcca ggccaagcca
     3721 ggggcgcatc tgggtgtact gctgatgatc gatggacggc atgttcacgg cattctggat
     3781 cacgccgcgc ttcaggtatt cgcgcacctg attggcgatc tgcacgccaa cagcatcctg
     3841 cgcttcattg gtcgacccgg cgatgtgcgg cgtagcgatt acgttttcga gcgcgagcag
     3901 cggagagtct ttgggcggct cctgggtaaa aacgtcgagc gcagccccgg ccacgtgacc
     3961 ggatttgatc gcttcggcca ggcccgcgtc atttaccagc tcgccgcggg cacagttaat
     4021 aatgcgcacg cccttcttca tcttcctgag tgactgctcg ttgatcatgc cctcggtttg
     4081 aggcgtgagt cccacgtgca ggctgagata atcggccgcc gcgaggacgc gatcgagttc
     4141 tgcgagttcg atctcaagct cgcgtgccac cgacgccgaa acgaacggat catgcgcgat
     4201 gatcttcatc tcgaacgcct ttgcccgctt cgccacttcc atgccgatcc ggcccaggcc
     4261 gatgatgccc agggtcttgc cgcgcagctc cgtcccctgt agcgatttct tctcccactt
     4321 tccggcgcgc gtggtgtagt cagccctgga gagatgccgc gccaaggcga gcatgagcgc
     4381 cagcgtatgt tcggccacgg cgacggcgtt ggcgccgggc gtgttcatga cggcgatgcc
     4441 ggccttcgtc gccgcttcca gatcgatgtt gtcaacaccg accccggcgc gcccgatcac
     4501 acgcagcttt tccgcgccac gcaggatgtc cgcattcacg tccacggccg agcgcacaat
     4561 caaggcgtct gcatcggcaa gcgcggcgcg caggttgccg ttgagctggt cggcagtgag
     4621 cacattccag ccgggttcgt ctttcaggag ctgcacggcg ttggcagcga ctttttcggc
     4681 gacgacgatt ttcataaggc acctcgacac gggctttacc acagaggaca cagaggaaca
     4741 cggagaagaa tcaaagggca gatggattca ccgagtagtc ctgttcctgt gatggcgaag
     4801 gccgactttt cgttcccgga tgaaacggga tgccggcaag gtcacaggaa tcgcggatcg
     4861 cagaaaactt ctctagatct cttcctttgc gctcctctgt gtcctctgtg gttaatagtt
     4921 cgttccggtt ctacttcgca gcagccaccg cctgggccga ctcggcataa acttcctgcg
     4981 cggcacgcag acctgcgccc agctttaccg gttgtcccat ctctaccagc acctgttcga
     5041 gcgcgccgat gatcgcaatc gtgtccagat agtcgtaata gccaagatgc gcgatgcgga
     5101 aaagctggcc tttcatctcg ccctggccat tggcgaccac ggcgccaaag cggttgcgga
     5161 aggatttcac aatatcgctg gaatcaactc cgtccggaga cgcgatggcg gtgagcgcgg
     5221 cgccgggcga cgaagcagag aaaagcttta ggcccagagc ctgcgcggca gagcgcgtca
     5281 tggctgcagc agtctcagcg ttatcgacta aaagcttcct gccagcggca agatcgccac
     5341 caccctgttc acggacataa tcgagcgccg caccaagagc agccaccaat gcggttgaag
     5401 gcgtgtaagc cgattcaccc ttggcgccgt tcttccgctc cttgcgcaaa tcaaagtagt
     5461 agcgcggatt ggtggtcttc tccatgtgtt gccaggcgcg atcactcacg gcggaataag
     5521 ccaggccggg cgggatcatc acggcctttt gcgagccgcc gatgatcaca tcaatgcccc
     5581 agccatccac gtcaaagtgc gtggtgccaa ggccggtgat ggcgtcgacc accagcaacg
     5641 tctctgtgcc gcgaagcagt ttggcgatgc cctgcacgtc atgccgcacg ccggtggagc
     5701 tctccgttcc ctgcatataa aggaccttgt gctcgggttt gagctgcgtt gaaacctgct
     5761 gcacagtgat ggtctgaccg taaggagcgc ggacggtgtc cacctgacaa ccgtaagctt
     5821 tggccagacc ttcccagcgc tcgccaaatt taccggccga aacgacaacg acgcgatcac
     5881 ccggcgaggt gaggttggcc acggcggctt ccatggcccc ggtgccggag gcggtgaaca
     5941 tcaccacgtc attgttggtg cccacaaaag tccttagatc ggcgagcacg cgggtataga
     6001 gcgcgcggaa ctcggccgtg cgatggtgca tggtggcggc cgccatggcg agctgggcgg
     6061 aaggaagaag ctgagtaggg ccgggagtaa aaaggcgagc tttgcgaatc atgtgactgt
     6121 acctgcggtg aaaatttgct tattcggaaa gatcgatctg gttgtagtcc gccgggtggg
     6181 cggagtagat ctgtgggccg tgcttcaaca gcaccaggct tgaggttggg tcttcagcgc
     6241 tctggataac cagtaaacca tcgccgtcgg gaacgaactg cggggacgta gtccattgta
     6301 tcttcgccag gtcggctttg ggaatgcgtg cgagcgcgtc cgcgtgggga aagatggcat
     6361 cgtacagcac ctgaccctcc gccagcatgg tgaggcggcg ctgtccgttc gggtcgagca
     6421 ggagatatgc ggaatcatgc atgccgacgc cgccggaaaa atcagcgcgg atgtgaccgg
     6481 ttagaggcgc tccatgggcg cggaggaaaa tcactgcgcc gcgaagatcg tcggcgctgg
     6541 ccacatgcca acctgtgagg cgcgggatgc gagaggcgtc tgccgtgtcc actccggagg
     6601 aacctgcaac tgcgcccacg gtcccgctcg cgacgggatg gttgtaaggc tgtgcaaaca
     6661 gaagcgcaat cagcgccacc agcccgagcg ccagcgcaac ccggatcaca acactgtttg
     6721 caggcctggg ccagggctcg attttgattg ctgtggcccc cggcatttcc tgaatgcgac
     6781 gaccaagttc gcccatggcc tgaagatgat caagcacgtg cttggcggcg aatgaaggga
     6841 tggtgagctc gctcagctcc atcatctgtc cgcggatcga gagtccagtt tgcgacgagc
     6901 agcaaagcgt ctccagagcc tgcctggctt catgcgtgct caggagcatg cgcacttcca
     6961 ccggctggct ggagcgtgcg ttgaagcgcg catcaagctg ctggcttccc gtgcgcatca
     7021 ggacgcggcc ttcaacggga cgctgttgcg tcttgggcat gacttcaagc ccgaaggtgg
     7081 ccggcacgcg catctggata tacaggccgg ggcgatccag ctgatgagaa aaacgcacca
     7141 cggtgggaat tttcgaatag gtgccggcca gcagcacgtc accgcctgcg cggaccggct
     7201 ttgtattcag gcggccggca acggcgaaga tttcagcttc catggcctta taaccgcgaa
     7261 gcacggcgaa ccgccgaatc caatagacaa tgatcccgat catcgcggtc agaatggcga
     7321 tattgaagat cacagcgtag ggagacatgg ctgaacagca gttctggcgg aatgataatt
     7381 cccgcattgg ccgggaagca acgatgagcc ccgctataat ttccttttca gcagagagga
     7441 aagagaatgg cgctcaccga gcagatccag aaggacatag tcgacgcaat gcgcagccgc
     7501 gacgagctgc gcctctcaac cttgcgcatg gtgaaagcag cgctcaagaa caaggaaatc
     7561 gacaagcgcg cgccgctgga cgacaaggaa gcgcagcagg tgctttccac cctgatcaag
     7621 cagcgtaagg actccattga gcagttccag aaaggcggcc gccaggagct ggcggacaaa
     7681 gaagctgccg agatcaagct gattgaggcg tatctgccca aggcgatggg cgaagaggag
     7741 attaccgccg cggtgaaggc caccatcgcg gaaatgggat cgcccacgat gaaggatatg
     7801 ggaactgtga tgaaggccgc tatggcgaag ctttccgcca ccggcgctcg cgtggaagga
     7861 aagacggtga gcgagatcgt gaaaaagcag ttaggcggat agccgacctt acgagctact
     7921 ctcaatccag gatttccggg gatcccggtt aatccaggca tttagcagtc accctgctgt
     7981 gctgctaaag tgcgccgaac cagcaaaaat gcttgcaccg gaaaaccaac ctgcggatac
     8041 ttacgatcaa agtacataag cttgttcccc aatcaggcga agtggcgatc ggcggtgacg
     8101 ggtatttttg ccgatggctg cgcctctgtg tgggaggtga caaatggttc ctgaatcgaa
     8161 tgtattgcag cagtttttca atcagctggt agagcgcaac tatggtgaag ttggagttcg
     8221 ccagccggaa gtccatcact acgtagccaa cctgcttacc gaattctgcc acgcagacaa
     8281 tctgttcaag atcaaaaacg acaaaggccg ggcgctggac gacgtgggcg aaatgatgct
     8341 cgaatcggat ccagtgtatg gaccagcgcc ttccttcgac cgcgagcgcc aggtacggaa
     8401 acacattggg gattacacac tcttctttac cggaatgttt ccggagagcc tgaaccggat
     8461 acgcctgcgt cgccagcgca tggaaggctt tattgacttt gtgaaggcgg gcaaggagag
     8521 ctactacatc gtctcaaagt ttgagcacta cgagtacgcg aaggtggcgc cgctcttccg
     8581 ccgcatgtca gaggagttcg aacggctggt ttacggcctg aaccaggcta agaacgaact
     8641 gcaggagatg caacatccca ttgcgcggca aacgcgcgag ctgctgatgt aacagcggcg
     8701 caggattgag ggcttgcggg cacggcggaa gagccgtgcc cgtttcattt acaagcccga
     8761 tctcatcacg tttcaaaggc gggtgtgcga gcatgctccc agggtttggg ggtacgcgag
     8821 aagcccggtg ccaacccgtg cttcgctacc cgttggcggc gccaaaccgt attaaaatcg
     8881 attgccaccg attccaaggc agaattaaga ggctatggcg caatctcgtt tgcaatttgt
     8941 gactttgtcc ggtgttccca ttgaggtatc cgagctcaag tggccctttc atccctctac
     9001 ctccggcagt gactggctgg tgctgcacgg ccgcgtggac ctgctgggca gcagtgaagg
     9061 gctgcatgcc gaagtggcag tgggcatgac gcagacgatg aaggagtcgc tgggatcgct
     9121 ggcgcaggag cacgcggagg gcctagtggt aaatgctatc cgaaagacga tcgacaacgg
     9181 gcagctggcg tttttgaagt cgggcaagct ccagccggcg catgtgacga gccggttcta
     9241 cagttttgtg acccagaaga tccagttccc cacacaaaat gagacggatg tgaaggagct
     9301 gattcgtcga cgcgtgttct ggctcaataa gatccacgat gggcagcaga ttgatgttgc
     9361 gtcgcggtac gactgcgagt acgtgaattt cacacaggac aaaatgctcg aactggcgcg
     9421 gcagcttgcc gcggaaggct ggatcaggat tgaaggcgcg gtggctaccg cgaccaacaa
     9481 gctgatgcag caggagccgg cgatggtcgc agccatgcag aaggccgtgg aggctggtaa
     9541 ggcagcgacg aaggtgacgg cgtaaccgca agtcacagcg aatgttcgcg gtataatttg
     9601 gcggaagacg gttctgcaat gaacactgag cacaagttgc tggcaatttt tcgcaagctc
     9661 ccgcccgaaa agcaggatct ggtgttgcag tgtgccgagg gtcttaattc caaggagccg
     9721 aaggctccgc tacacagcct tgaagggctc tgggaagacc ttaatatcga tttgagcgag
     9781 gaagagatca atcaggctcg gcgcgagatg tggggcaact tccctagaga cattgaatga
     9841 acggggtagt tctcgacacc caatgctcta gtctggcaag catctagacc ggcaaagctt
     9901 acagcttccg cccggaatgc cattcaggag tgctctaaaa gaggcaggcg tctttatatt
     9961 tcatcgatct cgctggttga actgatctac ttgaccgagt ctgcaagatt gcctttgagc
    10021 gctcttgatc gagtaaagca gctcctgagc agccggggtt caaactttgt ggttgcggat
    10081 gtgaaccaag ccattgctga acgtggtgca gacgattcct cgcagcaaga tccctgacat
    10141 gccggacaga atcatcgctg ctacagcggt aagtctcggt ctacccctga tcacacgcga
    10201 cgtcagaatc caatctgcgg gcttgaagac aatctggtga ctcagcctct tctcaccgtc
    10261 gagcacctta acatcagctt cgccacgcag ggcggtgaag tggccgcagt gcgcgacgtg
    10321 agctttgcaa tcccggagtc cggcacgctc gggttggtgg gcgaatcggg ttcgggcaag
    10381 tcggcgacat cgctggcggt catgcgcttg ctgccgccgc aggcaaaaat cacaggcaag
    10441 atcggtttca atggcaggga cctgctggcg ttgccagctg aagaaatgcg gcggatgcgc
    10501 ggctcaggaa tcagcatgat tttccaggag cccatgacgg cgctaaatcc ggtgatgcgg
    10561 attggcgatc aggtggccga agctgtgttg gcacatgaga agatctcgcg acgcgtggcg
    10621 ctggatcgcg cggtgcaagt gctggaagaa gttgcgattc ctgagccggg acggcggtcg
    10681 cgggactatc cgcaccagct atcagggggg cagcggcaga gagtgatgat agcgatggcg
    10741 ctcatcaaca atccacgcct gctgattgcg gatgaaccaa cgacggccct ggatgtgacg
    10801 attcaggcgc agattctgca gctgcttagc gagttgcgat agaagcacaa gctggcgatg
    10861 ctgtttatct cgcacgatct gggcgtggtt tcacgcgttg cggaccacgt tgcggtgatg
    10921 ctggcgggag agattgtgga agtggggccg gtggagccga tcttctccgc accggtgcat
    10981 ccttatacgc gaggcctgat cagcgtaata ccaacgctga agaccgatcg cgggcgtccg
    11041 ctggcaacgg tggtgaaaca aagcccggct gcacagccgg gcgcgatgcg agaagtctcg
    11101 ccgggacact gggcccgcgt tgctccataa atcgccttgc tggtttacac tctcagagac
    11161 caaaagcacg tgcgcattct tattctttct gacattcacg ccaatctgga agcgctggag
    11221 gcctgtcttg cggcggctcc tgagcacgat tgcgtgtaca acctgggcga tattgtggga
    11281 tacggcgcga atccaaatga agtaaccgag cgttcgcggc ggctgggaac ggttttcgtc
    11341 cgcggcaacc acgatagggc atgtacgggg ctgacgccgc tgaccgattt caatccgatc
    11401 gctgcactgg cagccatgtg gacccagcag aaccttacgc cggagaacct gacatttctc
    11461 aaacagctgc cgcatgggcc gattgcgccg ttcgacggcc tgcgttgcgt gcacgggtcg
    11521 ccgagagatg aagacgagta tgtgctgatg agacgcgagg cgttcaacat cctggcacat
    11581 gttgatgcgc cgcttacgtt ttttggtcac acgcatgtgc agggcggcta ctggattgac
    11641 gatgagcagg acacggaagg cggcatagaa atgagatatc ccgaaggacc ggggccgcag
    11701 cggatggagt tgcagttgga atcgacgggc aagtacctga tcaatccggg atcggtgggg
    11761 cagccacggg atggtgatcc gcgagcggcc ttcgcaagtt atgacacgga gaagatactg
    11821 gtcacgtatt tccgcgtgcc ttatgacatc gcgggtgcgc agaagaagat ctttgccgca
    11881 gggctcccgg agcggctggg tgtccggttg gaggaaggcc gatgacgcag agctcgctat
    11941 tctctgatcc gccggcgccg cgaagttcgg gctttgaggt gattgcgaat gtagacggcg
    12001 gagcgcgagg gaatccgggg ccggccgctt atggcgtcgt gatacgggat gcgcaaggaa
    12061 aagtggtgat ggagctgagc aagtatctgg gaatccagac caacaacgtt gctgagtact
    12121 ccggcttatt agcggcgctg gagtatgcgg cgcaggcaaa gtacgagtcg atcaaggtga
    12181 tcagcgactc agagctgctg gtgcggcaga tgcagggcag gtacaaggtc aaccatccgg
    12241 tgctcaagca gctctttgat aaggcaaagc tgctgacgga aagctttcat ctgtttcgca
    12301 ttgaacacgt cctgcgcgag aagaacaaag atgccgaccg cctggtgaat gaagtgctgg
    12361 accggcaggc gaaagcgaga tagcgcaaac gcgatgagcc cctaagttcg gaaaacgtgc
    12421 ccaaaaaatg attatgaaaa tcggaaaggc cggcaacgtt gccggccttc tcattcatgc
    12481 gcttgaaact gaatcagcgc tgctttatta gcccttcttg ggagcgatgg agtcttttgc
    12541 ggctttggca acgcggaatt tgacaaccgt ctttgcggcg atcttgatgg gttcgccagt
    12601 ctgcggattg cggcccatgc gagctttgcg gttcgacttc accaaacggc cgaggccggg
    12661 gatcacgaac acgccgttct tcttggtctc tttgattgcg gtctctgcca gatgctccaa
    12721 aaatgcggcc gcggtcttgt tgttggtctc aagtttctcg gccatgttgc ggacgagctg
    12781 tgtcttggtc atgccagatg ccatctttcc tccttgaaag gtgagtctct cagctcaccc
    12841 caccgaatat atacacgcgc agcaaaatca cgcaagcgtt ttcccctgat tttatgcggg
    12901 tttttttcaa ccccgcctgt ggaaatccca tgaacactgg ctttggcaga cttcccgccc
    12961 tccgctccgc gatttctaag gtgaacctca catctcgcgg cgctcttgtc acatccggca
    13021 cgtgcgatcc acaaccatcc gcgccacctc acccggctca gctcttccgc gtgtcgccgg
    13081 ctcagcgccc tcacccggcc agcttgtaaa agctgagcac cgcatcaccc tgctgcagct
    13141 tccgtgtccg gcgcagggct ccaaactcct ctcccggatc aaaatgttta tcgtgctcgg
    13201 caatcaccac gctctccttg cccagcaccc gcgactgccc caggaacccc agcacctcct
    13261 catactccgc ggccttccta tacggcggat ccacaaagca aaagtccgcc agcaccgcct
    13321 gggcatccag catgcgcagc gccgtggagg catcgcgctc aatcacctcc gcgccatctt
    13381 caatccccag ctccgccaaa ttcctccgga tcaccctcgc cgccttcgcc ccagtttcaa
    13441 tgaaatacac gctccgcgcc ccgcggctca gcgcctcaat ccccacagca ccggtcccgg
    13501 caaacacgtc cagccatacc gactcctcca ccctcgccgc caccacgtta aacagcgtct
    13561 cccgcagcct gtccgacgtg ggcctggtgt ccacgccctc cactgccgcc agcctccggc
    13621 tcctgtattt gcccgcgatc acacgcatat ccaagccatt ttagatgcct gcgaatcagc
    13681 ttctagcgac tagctgctgg ctttgggagc ccttggcctt tggcccttag ccttgtccag
    13741 acaccaattc ctctgcgccc tttgcgtcca ttgcggtgaa attgttttgt tcttgcgatt
    13801 ccggagcgat ctcctctgtg ttcatctgtg ttcatcagtg gcaaaagagt tttctgttct
    13861 ctgtgcctct gttctccttg cctccgtggt gaagactgct gttgctttcc gatatcccgt
    13921 tatcccgatc ttctgcgttc tctgcgatga atccgttttt gccaaaggcc aaaggctaag
    13981 ggccaaaggc tagaagctaa cagccagtag ctcctgatcc cgcgtgaatt tcccgccaaa
    14041 ccacgcaata tgaaacaatc gttctgtcct catgaagacc tggtcttatc ctctgctgcg
    14101 tatcgccggc gttgagttcc gactgcacat tacatttttc tttctgct
//
LOCUS       DASQYP010000210         3871 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_226075, whole genome shotgun sequence.
ACCESSION   DASQYP010000210 DASQYP010000000
VERSION     DASQYP010000210.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 3871)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3871)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3871
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_226075"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..220)
                     /locus_tag="VE783_06820"
     CDS             complement(<1..220)
                     /locus_tag="VE783_06820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016290775.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylyltransferase/cytidyltransferase family
                     protein"
                     /protein_id="HYX53145.1"
                     /translation="MKKIRAIYPGSFDPLTNGHLDLIERGSKIFDELIVSILVNSEKE
                     PLFTVPERMQMLEDMVRRFDNVSVDTFDG"
     gene            484..1071
                     /locus_tag="VE783_06825"
     CDS             484..1071
                     /locus_tag="VE783_06825"
                     /inference="COORDINATES: protein motif:HMM:NF017026.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rRNA adenine N-6-methyltransferase family
                     protein"
                     /protein_id="HYX53146.1"
                     /translation="MSSKPFRAEETLLFAKNFLQHPKMLGSLIPSSRFLVERLLKKVD
                     WERARTIVEYGPGVGTITGNILDRMKPHTRLVVFEMNEDFVRYLNRTFPDPRLHVVHG
                     SAENVQRELERLKLDGADYIISGIPFTTMPRELRDQIMRESRAALNPGGAVLVYQFTR
                     AVLPYLRSHFPRVSQDFEPLNILPARLFYCTQEAI"
     gene            complement(1072..3027)
                     /locus_tag="VE783_06830"
     CDS             complement(1072..3027)
                     /locus_tag="VE783_06830"
                     /inference="COORDINATES: protein motif:HMM:NF012698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix domain-containing
                     protein"
                     /protein_id="HYX53147.1"
                     /translation="MATEPAKITGVFKLGNEYELDLRAYELRRSGRALKLERIPMELL
                     ILLVEHRGELVGRNQILSRIWGENVSLDADNSINAAIRKLRQALRDDPAKPRFIHTVT
                     GKGYRFVATVTEIGSQPTPAPGTAGAVLPEPEPLPAPSPAAEVSKPVPRKTRWWLLVS
                     VSTLALLAAVGFWLWPQRHTRVPHPPGHAMVAVMPFQNLTHDPNQEYFTDGMTEELIS
                     RLGDLDPQTFGVIAPSSVMPYKGATVPLEQVARKLRVTYILQGSIKREEEQTRISVSL
                     VSGPDQAQLWTKSYAPGPGDLLIIQADIASEVAALVRQHEGKTARPEKAVRAITLTAE
                     QTASHDLYLQGLYVWNKRTVSNLKQAIDYFQEAVNKDPKNARANALMADCYALIGGYD
                     TSVSPRDLIPKAREAARRANDLDPSLPEAHTALALIAQNYDWDWQTAESEYRRAIELN
                     DSYATAHHWYGEMLGLEGRFDEAFREFDRALELDPLSLIVASDRGVLLYYSRQYDRAI
                     DQFRSVMERDPDFGRAQMIIYAYVEKGLYKDAITDVQQWDRKFGQNLWSLAITATIYG
                     RQGDKARASAAVHRIEELSRNKPIDPAVLLTAYLGEGDKERALQWLAKAYEAHATSLT
                     NLKVNPEFDSLRQEPRFHAVLRGMNLE"
     gene            3234..>3871
                     /locus_tag="VE783_06835"
     CDS             3234..>3871
                     /locus_tag="VE783_06835"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53148.1"
                     /translation="MRRIEETPGTEATSKGKFGYRVAGVLVSAAFLTTILSADSLLRN
                     LIPFRDSSGMVRTYSPSPEAAPGNAFFQSLGTNGRSCASCHQAGDGWGVTPAHIRERF
                     EASKGLDPIFRTNDGANCPSADVTTVDARRQSYSMLLNKGLIRVSIGVPAGAEFAVTG
                     IDDPHNCAETTPAGLALFRRPLPSTNLPFLSTVMWDGRESPKGQTLLADLTQ"
BASE COUNT          830 a         1085 c         1124 g          832 t
ORIGIN      
        1 ggccgtcaaa cgtatccaca ctcacgttat caaaccggcg caccatgtct tcgagcattt
       61 gcatgcgctc agggactgtg aacagcggct ctttttccga attcacgagg atggaaacga
      121 tcagctcgtc gaaaatcttg ctgccgcgtt caatcaggtc cagatggccg ttggtgaggg
      181 ggtcaaacga ccccggatag atggcgcgta tcttcttcaa atgatttctg ctcagggagt
      241 gactaccacc cgattttaag ctggaatgcc cgccggggta aacgacaatt aagcatttaa
      301 tcgccagcgg cgtgccggcg tgcgcgcgag gggcgacaag tgtggcagaa cgtgtgctcc
      361 gcgaaaacag gcgccttccg gcggttagcg gtgatctatt tccgttcgct ttacatctca
      421 cccctgtggc gagtagtgtt tgttgctgcc agcacgcgct cccccgagtc atgagccaaa
      481 ctgatgtcaa gtaagccatt ccgcgccgaa gagaccttgc tgtttgccaa aaactttctg
      541 cagcatccca agatgctggg ctcgctgatt cccagttcgc gcttcctggt ggagcgtctg
      601 ctgaaaaaag tggactggga acgcgctcgt accatcgtgg aatacggccc cggcgtaggc
      661 acgatcaccg gcaacattct ggatcgcatg aagccacaca cgcggctggt ggtctttgag
      721 atgaacgagg attttgtgcg ttacctgaat cgcacgtttc ccgatccacg attgcatgtg
      781 gttcatggat cggctgagaa tgtgcaacgc gaactcgaac ggctgaagct tgacggcgcc
      841 gattacatca tctccgggat tccgtttacc accatgccga gagagctgcg cgaccagatt
      901 atgcgggaat cgcgggcggc attgaatccc ggaggcgccg tgctggttta tcaattcacc
      961 cgggcagtcc tgccctacct gcgcagccat tttcccaggg tgtctcagga ttttgaacca
     1021 ctgaacattc tgcccgcgcg gctcttctac tgcacccagg aagccattta attattcgag
     1081 gttcattccg cggagtacag cgtggaatcg cggctcctgg cgaaggctgt caaattcggg
     1141 attgaccttg agattggtaa gcgaggtggc atgggcttca tacgccttcg ccagccattg
     1201 cagcgctcgt tctttatcgc cttcaccgag gtatgcggtc aaaagaacgg ccggatctat
     1261 cggcttgttg cggctgagct cctcgatcct gtgcaccgcg gcgctcgcgc gggccttatc
     1321 gccctggcga ccgtagatgg tggccgttat cgccagtgac cacaggttct gaccaaactt
     1381 cctgtcccac tgttgaacat cagtgatcgc gtccttatag aggccttttt ccacataggc
     1441 gtaaatgatc atctgggcgc ggccaaagtc ggggtcgcgt tccatgacgg agcggaactg
     1501 atcgatcgcg cgatcgtatt ggcgcgagta gtagagaaga acaccgcggt cgctggcgac
     1561 aattaacgat aaagggtcga gctcgagcgc ccggtcaaac tcgcggaatg cctcgtcaaa
     1621 gcgcccttcc agaccaagca tttcaccgta ccagtgatgg gcggtagcat agctgtcatt
     1681 caattcgatg gcgcgccggt attcactttc cgcagtctgc cagtcccaat cgtaattttg
     1741 tgcaatgagc gccagcgcgg tatgagcttc cggcaaagac gggtcgaggt cattagcccg
     1801 gcgagcagcc tcccgagctt ttggaatgag atcgcgagga gagaccgagg tgtcatatcc
     1861 gccgatcaag gcgtagcaat cagccataag ggcattagct cgggcgtttt tcgggtcttt
     1921 attcaccgcc tcctgaaaat agtcgatggc ttgcttgaga ttggagacgg tgcgcttgtt
     1981 ccaaacgtaa agcccctgca aatagaggtc atgcgaggcg gtctgctcgg ctgtgagcgt
     2041 gatagccctc acagcttttt ctggccgtgc agtcttgcct tcatgctggc gaaccaaggc
     2101 tgcaacttca ctggcaatat cggcctggat gatcaataaa tcgccggggc cgggcgcata
     2161 gctcttagtc cagagctgtg cctggtcagg gccggaaacc aggctcacgc tgatgcgggt
     2221 ctgttcctcc tcccgcttaa tactgccttg cagaatgtac gtgacccgaa gtttccgcgc
     2281 gacctgctcg agcggcacgg tggcaccttt atatggcatg actgagctgg gggcgatgac
     2341 cccgaatgtc tggggatcaa gatcacccag gcgagagatc agttcttcag tcatgccgtc
     2401 agtaaagtat tcctgattcg ggtcatgagt gagattctga aacggcataa ccgcgaccat
     2461 tgcgtggccg ggtggatgcg gcacccgcgt gtggcgttga ggccacagcc agaacccgac
     2521 agcagccagc aaggccagcg tcgagacaga gaccaaaagc caccatcgag ttttacgcgg
     2581 gacaggtttg ctgacttcgg ccgcagggga cggcgctggc aaaggctccg gttccggcaa
     2641 tacggcaccc gcggtccccg gagctggcgt aggctgcgag ccaatttcgg ttacggtcgc
     2701 aacgaacctg taacccttgc cggttacagt atgaatgaag cgtggtttgg cgggatcgtc
     2761 gcgcagggcc tgacgcagct tgcgaatggc ggcgttgatg ctgttgtcgg catccagaga
     2821 aacattttca ccccatatac gcgaaagaat ctggttgcgg ccaaccagct caccccgatg
     2881 ctccaccagc aatataagga gctccatggg gatgcgttcg agcttcagag cacggccgga
     2941 gcggcgtaat tcataggccc gcaggtcgag ctcgtactcg tttcctagct tgaaaacccc
     3001 ggtgatctta gctggttcgg tggccactgg atggggccct ttcaacttgc tggcacgcaa
     3061 tagtacaacg attgccaaat cctggaaaaa cacattcagt tcaggtactt acgagttcat
     3121 tcattcttaa ggaaatcttc aggcaccctc cattgaaagc taacgccgcg aggcatattt
     3181 tccccaagat cgtttgaaca atcaccgcca gagagtgatc gaggaggatg tcaatgcgac
     3241 ggattgagga gaccccgggg accgaggcaa ccagcaaagg aaaattcggc tacagggttg
     3301 caggcgtgct cgtgtcggct gcgtttttaa ccaccatact gtcagccgac tcgttgctac
     3361 gcaacctaat cccattccgc gacagcagcg gtatggtgag gacttacagt cccagcccgg
     3421 aagcagcacc cggtaacgcg ttttttcaga gtcttggaac gaacggccga agctgcgcca
     3481 gctgccacca ggcaggcgac ggatggggag tgactccggc acatatcaga gagcgctttg
     3541 aagccagtaa agggctggat cccatattcc ggaccaacga cggagcgaac tgcccgagcg
     3601 ccgacgtaac taccgtggat gcaaggcggc aatcctatag catgctgctg aacaaggggc
     3661 tgatccgggt ttcgattggc gtgccagcgg gtgctgagtt cgccgtcacc ggcattgatg
     3721 atccgcataa ctgcgccgag accacgcctg ccggtctggc gctcttccgg cggccgctgc
     3781 cctccacgaa tctgccgttt ctgagcacgg tgatgtggga cggacgcgag tcgccaaagg
     3841 ggcagaccct gcttgccgac ctcacgcaac a
//
LOCUS       DASQYP010000211         3015 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_307336, whole genome shotgun sequence.
ACCESSION   DASQYP010000211 DASQYP010000000
VERSION     DASQYP010000211.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 3015)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3015)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3015
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_307336"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..627)
                     /locus_tag="VE783_06840"
     CDS             complement(<1..627)
                     /locus_tag="VE783_06840"
                     /inference="COORDINATES: protein motif:HMM:NF022646.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2891 family protein"
                     /protein_id="HYX53149.1"
                     /translation="MKSLFLLLALAMTHQNALALNQDKKQAFDAATAERFARLALACV
                     HKEYPNKIAHSMNSDADVAPPRKLTPAFYGCYDWHSSVHGHWLLVRLARKFPNAASTP
                     EALNALRQSLTAENLRQEAAYLNAEGRASFERPYGLAWLLQLAAELREWEQQEKNPVA
                     AELSTNLRPLENAAKARLKTWLPKLSYPVRIGEHNQTAFSLGLAIDYAR"
     gene            complement(652..1791)
                     /locus_tag="VE783_06845"
     CDS             complement(652..1791)
                     /locus_tag="VE783_06845"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53150.1"
                     /translation="MAKRPFILLFALLLFRAASPFSSAQTTPHGICSAFAPDGTLATA
                     TGRNGDLELKITDPESKVVLDEVQQLPGALAKKCEQAFSPDSKWLVTVVYANELTVFV
                     YNLEARRLQKKFSSPWFGFETGYGSTFLAGFLPDDSLVLVRYVRQNVADHSDASHIKL
                     HLESWSVNGELLSDREIGDDYYGRQPVFFSDLDLLWIQDNCGTTICETGWTISKTGIT
                     KEGSFQLPGDYHAPAVALPEKDDVLYIYGEAKQKASLLDPSGHVESEISLPFTPNLLR
                     PLVPDWYYAKQPAISADAGIAAVPRHHVAWVLVDTDRDWGSDIVVLRLHPLKVIARLK
                     TGQGGLGAVSVAHSDGIIRLVGFWHGKWHQLQCKEDDSAECKFKE"
     gene            complement(2162..>3015)
                     /locus_tag="VE783_06850"
     CDS             complement(2162..>3015)
                     /locus_tag="VE783_06850"
                     /inference="COORDINATES: protein motif:HMM:NF025885.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008134 - transcription factor binding
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="sigma 54-interacting transcriptional regulator"
                     /protein_id="HYX53151.1"
                     /translation="STVLILGESGTGKEVAARALHRNSRRAEKAFVAVNCATLGDNLL
                     ESELFGHERGAFTGAVGMKRGLLETAESGTVFLDEVAELPLTTQAKLLRVIQEREFTR
                     LGSTKPIRVDLRIIAATNKDLRAAIAAGTFREDLWHRLNVVSIKMPPLRERMDDTRLL
                     ATFFLAKSSKRCGRRVVGFSPEAMAALRQHDWPGNVRELENAIERAVVLGSEPEVQVT
                     DLPEDLWQAAPAPSSGPLGYHAALREAKLRIVRQALEESANNYTEAARRLGVHVTYLH
                     RLMRGLK"
BASE COUNT          616 a          830 c          968 g          601 t
ORIGIN      
        1 gcgagcgtag tcgatggcca agccgagcga gaaggctgtc tgattgtgct caccgatgcg
       61 gactggataa gagagcttgg gaagccaggt tttcaggcgc gccttggcgg cgttctccag
      121 cgggcgcaga ttggtggaga gctcggcggc cacgggattt ttctcctgct gttcccattc
      181 acgcagctcg gccgcgagct gcaacagcca tgccagtcca tacgggcgct caaagctggc
      241 gcggccttcc gcattcagat aagccgcttc ctggcgcagg ttttccgccg tgagactctg
      301 ccgcaaggcg ttaagcgcct ccggtgtgga agcggcattg gggaacttgc gggcgaggcg
      361 caccaggagc cagtgtccgt gaacggatga atgccagtca tagcagccat agaaggcggg
      421 cgtgagcttg cgcggaggcg ccacgtcggc gtcactgttc atggaatgcg cgatcttgtt
      481 gggatactcc ttgtgcacac aggcgagcgc gaggcgggcg aagcgctcag cggtcgcagc
      541 atcaaaggcc tgcttcttgt cttggttcag cgcgagtgcg ttttggtgag tcatggcgag
      601 ggccagcagc aggaagaggc tcttcattac cgatcaatga tagacgagcc attactcttt
      661 gaatttacac tctgccgaat catcttcttt acactgcaac tgatgccatt tgccgtgcca
      721 gaagccgacg agccggatga tcccatcgct gtgagcaacc gagacggcac ccagtccgcc
      781 ttgaccggtt ttcaatctgg caatcacctt cagcggatga agtctgagaa cgacaatgtc
      841 actgccccag tcgcggtcgg tatccaccag cacccaggcc acatggtggc gaggaacggc
      901 tgcgatcccc gcatcggcgg aaattgccgg ctgcttcgcg taataccagt ccggaaccag
      961 tggacgcagc agattgggcg tgaacggcag agagatttct gactcaacgt gaccagaggg
     1021 atcaagcagg ctagcctttt gctttgcctc accatagatg taaaggacgt catctttttc
     1081 cggcagggcg acagcgggag catggtaatc accgggcaat tggaaagacc cttcttttgt
     1141 gattccagtt ttggagatcg tccagcctgt ctcgcaaata gtggtcccgc agttgtcttg
     1201 aatccaaaga agatcgaggt cactgaagaa cacgggttgg cggccgtaat agtcatcgcc
     1261 gatctcgcgg tcagagagca gctcaccatt cacgctccag ctttccaggt gcagctttat
     1321 atgcgaggca tcgctgtgat cagcgacgtt ttggcggaca taccgcacca agaccagaga
     1381 atcgtccgga agaaagccgg cgagaaacgt ggacccatag ccggtttcaa atccgaacca
     1441 tggagatgag aatttcttct gcagccggcg ggcctcaagg ttatagacga aaaccgtaag
     1501 ctcgtttgcg tataccactg tgaccagcca tttggagtca gggctgaaag cctgctcgca
     1561 ttttttggcc agagctccgg gcaattgctg cacctcatcc agaacgacct tgctctctgg
     1621 atcagtgatc ttgagctcga gatcgccgtt tctgcccgta gcggtagcca atgtgccatc
     1681 aggagcgaag gcggagcaga ttccgtgcgg cgtagtctgg gcactggaga acggagaggc
     1741 ggcgcgaaaa agtagcaggg cgaacaggag aatgaagggg cgcttcgcca ttgagtacca
     1801 gagtagcggc gagcgctgag agcgtcaaat gccaagaagg ccttagcgac gaattgacag
     1861 cgtttgagag tcagctactc gctgctgtgt cagcttcgcg cgtgtggcta ttatcgatcg
     1921 gcctctgcca agccgaacac acttctcgca accgttcacg gattgcatcc cacatggaga
     1981 gtgggagtga tctgggcgta cgcgaagctg cagcggagca gacccctcac cgctcgcgct
     2041 cacggtggtt cgcactcggg attcggggtg ggtccttcag ggggaggagt ctggtgaaga
     2101 ggcgacgaga atggacaacg gtgagttcct tttcacgtag agagcgcaaa gagacacagg
     2161 gctacttcaa gccgcgcatg agccgatgca ggtacgtgac gtggacgccg aggcggcgag
     2221 cggcttcagt gtagttgttg gcggattcct ccagggcctg gcggacgatg cgaagcttgg
     2281 cttcgcgcag cgctgcatga taaccgagcg ggccagagga tggtgcgggc gcggcctgcc
     2341 agaggtcttc cggcaggtca gtgacctgga cttccggttc ggatcccagc accacggcgc
     2401 gctctatcgc gttttccaac tcgcggacgt tgccgggcca gtcatgctgg cgcagggcgg
     2461 ccatggcttc cggagagaag ccgaccacgc ggcgtccaca gcgcttgctg gacttggcca
     2521 gaaaaaaagt ggccagcagg cgagtgtcat ccatgcgttc gcgcagcggc ggcattttga
     2581 tagagacaac gttgaggcga tgccacaggt cttcgcgaaa ggtcccggcg gcaatggcgg
     2641 cgcgcagatc tttattggtt gccgcgataa tccggaggtc cacgcgaatc ggtttggtgc
     2701 tgccgaggcg ggtgaactcg cgctcctgga taacgcgcag cagcttggcc tgggtggtga
     2761 gcgggagttc cgctacttca tcgaggaaga cggtcccgct ttcggcggtt tcgagcaggc
     2821 cgcgcttcat gcccacggcg ccggtgaatg cgccgcgctc gtggccgaag agctcgcttt
     2881 ccagaagatt gtcacccaga gtggcgcagt tcacggcgac aaaggccttc tcggcgcggc
     2941 ggctgttgcg gtggagtgcg cgagcggcca cttccttgcc ggtcccgctc tcgccgagga
     3001 tcagcacagt gctat
//
LOCUS       DASQYP010000212         2311 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_183081, whole genome shotgun sequence.
ACCESSION   DASQYP010000212 DASQYP010000000
VERSION     DASQYP010000212.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 2311)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2311)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2311
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_183081"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(709..>2311)
                     /locus_tag="VE783_06855"
     CDS             complement(709..>2311)
                     /locus_tag="VE783_06855"
                     /inference="COORDINATES: protein motif:HMM:TIGR00711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_process: GO:0006855 - xenobiotic transmembrane
                     transport [Evidence IEA];
                     GO_process: GO:0009410 - response to xenobiotic stimulus
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="DHA2 family efflux MFS transporter permease
                     subunit"
                     /protein_id="HYX53152.1"
                     /translation="CSMSTANLTEIRSAALSKPNSGKWLVAIAVMSSAVMEVLDTSVV
                     NVSMPHIAGNLGATTDEATWVLTSYIVANAVILPITGWLANYMGRKRLLLTVVTGFTV
                     SSMLCGLAWNLPTLILFRILQGTTGGGLQPLSQAVLLEEFPPEERGKAMGFWGLGIVA
                     APILGPTLGGWLTDAYSWRWVFYINLPIGIASLVMISLFLSDPPYIKRGALKADVWGL
                     LMLAVGMGSLQVMLDKGQEEDWFSSNFIRTLTVMAVVFLTWFVIRQLRSPDAIVHFHL
                     LKFRSFFAGIILVTVMGFVLYGSLIVLPLFMQTLLGWSAVTAGIWTSPRGIGTAICMP
                     IAGYLLGKRFDGRYLVAAGFLIAGWAFFGYSHLTLESGTWDIFWHQINQGVGMAFVFV
                     PLTTLTMAPIPREETGYATSLYSVMRNIGSSFGISFVTTWIARREQFHQATLSADVTQ
                     YSQQVQQMIQQSTQAFMHSGADTVTATQQALAALYGTVQQQAALLSFVDVFRVMGWMF
                     VVIVPAVFLMKRANPNKKTDAAAMH"
BASE COUNT          530 a          690 c          636 g          455 t
ORIGIN      
        1 gacctttgaa aatcccaacc agctttccgt cggcatgcaa tacgtgctgg taaatggcat
       61 cccggtgatc gaagatggca aagccactgg agcgcttccc ggcaaggtgc tgcgcggccc
      121 agggtatatg aagtgacgag ctgaagctga gatttctata gagcgccggg gatttccgag
      181 cgtgccccta tgcgaagtga tgaacgctct tgtggatcgc agtcgccccc ggctgcgcgc
      241 tgcccaaaat gcaacccagt cacgaatgat tgacattcaa gctagaagct ctggcgaata
      301 gcttactaga agctaactca taaatctgct aatccggatc tgggctctgg cagttggttg
      361 acgccggccg gcttctctct tgcgtgttga atatggctct ttgttaactg tgtagcacag
      421 gcgacctcgc ctgtgccgca aagttgtcaa tctaccgccg caaattgccg caccttgaaa
      481 gagacggcgg ttcgtactta acgacatttc atagttgaag agaatggctc cgtgctcgga
      541 gccggcacga atatctcggg tattggccac gtcacatgag aaagctaaac cgaaagagaa
      601 gaccatccgt tggccctgtg agtaaccggc acaggcgagg gcgcctgtgc tacaaagctc
      661 ttacggaacg agtcatttgc gacagcttct agttattaat tgctcgcttc aatgcatcgc
      721 cgccgcatcc gtcttcttgt tcggatttgc tctcttcatc aggaacaccg ccggaactat
      781 caccacgaac atccagccca tcacgcggaa cacgtcaaca aagctgagca gggcggcctg
      841 ctgctgcacg gtaccataga gcgcggccag cgcctgctgc gtggcggtaa ccgtgtctgc
      901 gccactgtgc ataaaagcct gggtcgattg ctggatcatt tgctgcacct gctggctgta
      961 ttgcgttacg tcggcagaga gcgtcgcctg gtgaaactgc tcgcgccgtg caatccacgt
     1021 ggttacaaaa gagatcccaa agctcgaccc aatattgcgc atcacgctgt aaaggctggt
     1081 ggcgtaaccg gtctcttcgc gcggaatggg cgccatggtg agcgtagtca gcggtacgaa
     1141 gacaaacgcc atgcccacgc cctggttgat ctggtgccag aagatgtccc acgtccccga
     1201 ttccagcgtc agatgcgagt agccaaagaa cgcccaaccg gcaatcagga atccggctgc
     1261 gaccagatag cgcccatcaa agcgcttgcc cagcagatat ccggcaatcg gcatgcatat
     1321 ggccgtacct atgccgcgcg ggctcgtcca tattccggct gtcacagcac tccaccccag
     1381 caaagtctgc atgaacagag gaagcacgat caggctgccg tagagcacaa agcccatcac
     1441 cgtgaccagg atgatgccgg caaaaaagct cctgaattta agcagatgaa aatggacaat
     1501 cgcgtccggc gacctcaact gccggatcac gaaccatgtc aggaacacca cagccatcac
     1561 cgtgagcgtg cgtatgaagt tcgaactgaa ccagtcttct tcctgcccct tgtccagcat
     1621 tacctgcagg gagcccatcc ccacggccag catcagcagt ccccacacgt ccgctttcag
     1681 ggcgccgcgt ttaatgtacg gagggtcgct gaggaaaagc gagatcatca ccaggctggc
     1741 aattccaatc ggcaggttga tgtagaacac ccagcgccac gagtacgcgt cagtaagcca
     1801 gccgccgagc gtggggccaa gaatgggcgc cgccacaatg cccagccccc agaatcccat
     1861 ggccttgccg cgttcttccg gtgggaactc ttccagcagc acggcctgcg atagtggctg
     1921 caacccgcct cccgtggtgc cctgcagtat gcggaacaga atcagcgtgg gtagattcca
     1981 cgccagcccg cacaacatgc tggaaaccgt gaagccggtg accacggtga gcagcagccg
     2041 cttgcgcccc atgtagttgg ccagccatcc ggtaatcggc aggatcaccg cattagccac
     2101 gatgtaggaa gttagtaccc aggtagcttc atcagtcgtg gcgcccaggt tgccggcgat
     2161 gtgcggcata ctcacgttca ccaccgatgt atcgagtacc tccatcaccg cgctcgacat
     2221 cacggcaatg gcgaccagcc acttgccgga gttcggcttc gagagtgccg ctgatcggat
     2281 ttcggtgagg ttggccgtgg acatactgca g
//
LOCUS       DASQYP010000213         2303 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_307414, whole genome shotgun sequence.
ACCESSION   DASQYP010000213 DASQYP010000000
VERSION     DASQYP010000213.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 2303)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2303)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2303
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_307414"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(233..1453)
                     /locus_tag="VE783_06860"
     CDS             complement(233..1453)
                     /locus_tag="VE783_06860"
                     /inference="COORDINATES: protein motif:HMM:NF019403.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5009 domain-containing protein"
                     /protein_id="HYX53153.1"
                     /translation="MATSTQSTITSTSDSCEGGTFSRRQRLESLDVFRGLTIAGMILV
                     NDPGSDAIYWPLGHADELQTAHPSGWYAGKWWIDANGWTPTDLIFPFFLFIVGVSMVM
                     SFAVRRARGDSRGLLLKHTVRRSFLILLIGYAIRILPLFHFAHMRYPGVLQRIAIVYL
                     FASIITLWTETRGRVLWISGLLVGYYLVSRFVPVPGCDSAAWMTQHCSLAAWLDRKVM
                     LGHLYRPDFDPEGLLSTLPAIASTLLGTLVGEFLRATGPLAQKLRGLTIAGIAGAVAG
                     YLWHPWFSISKPLWTSSYVLFTAGAACLTLALCWWLIEMRGWRAWARPFLWLGSNAIL
                     AYALSTFAAKLGAIIKVTDGGRTTELQTWVFTHWFSPFAQPQNASLAFALSYVALWTL
                     VAWALFRKKVFVKV"
     gene            1816..2049
                     /locus_tag="VE783_06865"
     CDS             1816..2049
                     /locus_tag="VE783_06865"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53154.1"
                     /translation="MKIFDALFGCWHKNMSFPLSSKRGQRRQDAAAHTGTYVVCLDCG
                     REFAYDWKTMRVVGGYEARPYNHSQIEAEAKAS"
     gene            complement(2075..>2303)
                     /locus_tag="VE783_06870"
     CDS             complement(2075..>2303)
                     /locus_tag="VE783_06870"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53155.1"
                     /translation="RAGSLKNKTEARTFRASDHSNSRLIELPAVQSHPEGGSGLRKHP
                     NRGDVDRGVVPEITDNYRQYVCHPEGSFAFH"
BASE COUNT          547 a          629 c          697 g          430 t
ORIGIN      
        1 cagtcgtagg tgccggggcc ggtgccgctg ccgatggcaa gaattcgctc cagcccggca
       61 tcatgagcgc gttgcagcat ctcgacgcgg tccgcgtcaa atttatggcc ttcaatgtgg
      121 gcgtgagaat cgatgtacac gatgggtcgg tatagaagat gacattggct acaggttgca
      181 gtcaaatggc agaccggtga ttcaatatca gagggagccg gcaagccgaa cgctaaactt
      241 tgacgaagac tttcttccga aacagcgccc acgccaccag ggtccacagg gccacataag
      301 acagtgcgaa ggccagcgac gcgttctgcg gctgagcaaa tggcgaaaac cagtgagtga
      361 atacccaagt ctgcagctca gtggtacggc ctccatcggt caccttgatg atagctccaa
      421 gctttgccgc gaaggtggag agcgcgtagg caagaatcgc atttgaaccc agccacagga
      481 acggcctggc ccaggcgcgc cagccacgca tttcaatgag ccaccagcag agcgccagcg
      541 tcaggcaggc cgctccggcg gtgaagagaa cgtaagaact cgtccacagc ggtttcgaga
      601 tcgagaacca ggggtgccac agatacccgg ccacagcgcc ggcgattccg gcaatcgtga
      661 gccctcgcag cttctgggca agcgggcctg tcgcgcgcaa aaattcgcca acgagcgtac
      721 ctaacaatgt gcttgcgatc gcgggcaggg tgctgagcag tccttcaggg tcgaagtccg
      781 ggcggtagag gtggccgagc atcaccttgc ggtcaagcca cgcggcgagg ctgcaatgct
      841 gcgtcatcca tgcagcggag tcgcaacccg gaacgggcac gaaccgcgac accaggtaat
      901 aaccgacgag cagcccggaa atccagagca cgcgtccgcg cgtttccgtc cacaaggtga
      961 tgattgaggc gaagagataa acgatggcga tcctctgcag cactcctgga tatcgcatgt
     1021 gagcgaagtg gaagagcggc aggatgcgaa tcgcgtatcc gatcagcaaa atgaggaagc
     1081 tgcgccgcac ggtgtgtttc agcagcaggc cacgcgagtc gccgcgcgcg cgccgcaccg
     1141 cgaacgacat gaccattgac accccgacga tgaacaggaa aaacgggaag atcaggtcag
     1201 tcggagtcca gccattggca tcaatccacc acttgcccgc gtaccatcca gagggatgag
     1261 ccgtttgcaa ctcatcagcg tggcccagcg gccagtagat cgcatctgaa cctggatcat
     1321 tgaccaggat catgcccgcg atcgtgagcc cgcggaagac gtccagcgac tcaagccgct
     1381 gccgacgcga gaaggtaccg ccctcgcacg agtctgaagt gctggtgatt gtggattggg
     1441 ttgaagtagc cattcgttcg gatgccggca gcttctatat atcagggaaa tcgagcccac
     1501 ggaaaaatga tttagcaatt tctttgcact cttctcgggc cgggaaacat ctttacgttt
     1561 gtttatggca gagggcgcag aaatccgtcc gggcggcgtt ctgcgtattg aaaacgtgag
     1621 gctttccggg cgccggagtg acaaactttg tcactgggtt gtgcaaaacg aatgaaacgc
     1681 ttccgggttc aacctcacat aactgtaacg gaagtactac gcgggatgag ccggtaggcc
     1741 ctgcaagaat acggaaccaa cgtccgtgag tgcgtccgtg gcacaggttt gggtcccagg
     1801 tatttggagg agaaggtgaa gatttttgac gcactgtttg gttgctggca caaaaacatg
     1861 agcttccccc tgagcagcaa gcgcggacag cgacggcaag acgccgcggc ccataccgga
     1921 acttatgtgg tgtgcctgga ttgcggcagg gaattcgcat acgactggaa gacgatgcgc
     1981 gtcgtaggcg gatatgaagc acggccctac aaccactcgc agatcgaagc agaggccaaa
     2041 gcaagctgag tttttgtttt ttcgacggag cggctcaatg aaacgcaaaa ctaccttccg
     2101 ggtggcaaac atactgacga tagttgtctg ttatctctgg tacaaccccg cggtccacat
     2161 cgccgcggtt cgggtgcttt cttaaacctg aaccgccttc cgggtgagac tggaccgcgg
     2221 gaagttcgat gagtctgctg tttgaatgat cagaggcgcg gaatgttcgc gcctcagttt
     2281 tatttttgag cgaacccgct cga
//
LOCUS       DASQYP010000214         5244 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_7829, whole genome shotgun sequence.
ACCESSION   DASQYP010000214 DASQYP010000000
VERSION     DASQYP010000214.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 5244)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5244)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5244
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_7829"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(6..1364)
                     /gene="mtaB"
                     /locus_tag="VE783_06875"
     CDS             complement(6..1364)
                     /gene="mtaB"
                     /locus_tag="VE783_06875"
                     /inference="COORDINATES: protein motif:HMM:TIGR00089.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-
                     methylthiotransferase MtaB"
                     /protein_id="HYX53156.1"
                     /translation="MPSYFVENFGCRATQADGAVLERELSGRGFDRAEDPASADMVVL
                     NTCTVTAAADQDARAAIRRAYRANPKARILVTGCYAQRAPEEIASLPGVTWVVGNSHK
                     HQVPEILGSAGSDFVSAETLQLSSPAFTMVGDIFAHTELIAAPVFSGDELGSKTRPNL
                     KVQDGCDNRCSFCIIPSVRGQSRSMKLDRVIAEANALNEAGFREVVLSGINLGRWGRD
                     LEPKQRFVDLLRALLDRTSIEKFRISSVEPMDWTDEVIELVAGSPRIAKHAHVPLQSG
                     SDTILRLMHRKYRPWHYVEKIRKIREAMPDAAIGADVMTGFPGETEELFQENLSFIER
                     LPFTYLHVFTYSARPGTLAAAMREQVPVQVARERTRVLRKLAAEKNRAFRESFVGRTL
                     DVITLQTRGEGWTEALSDNFLKIRLEGQHEPNQLLRVEVTENGSEEVLAVRAKECCVA
                     KC"
     gene            1486..1923
                     /locus_tag="VE783_06880"
     CDS             1486..1923
                     /locus_tag="VE783_06880"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HYX53157.1"
                     /translation="MKRRILLVDDELAILLTLKAILEIHGFEVETAASGKEAISKLKN
                     NVYHMVITDMKMEHEKAGYDVIRAAKKTDYNPAVSILTAYPLLGGDWKKEGAQSMLVK
                     PMNTDDLLRQIEALLIQHEDQKQRAGKQLHHPHGQTQAAKKPA"
     gene            complement(2559..2756)
                     /gene="rpsU"
                     /locus_tag="VE783_06885"
     CDS             complement(2559..2756)
                     /gene="rpsU"
                     /locus_tag="VE783_06885"
                     /inference="COORDINATES: protein motif:HMM:TIGR00030.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S21"
                     /protein_id="HYX53158.1"
                     /translation="MAEVRLQEGEPLENALRRFKRKVQQDDTIKEFKRHSYYLKPGEK
                     RRMKQALARTRYRKKARREQD"
     gene            complement(2962..4302)
                     /locus_tag="VE783_06890"
     CDS             complement(2962..4302)
                     /locus_tag="VE783_06890"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HYX53159.1"
                     /translation="MLKRITWLAIFLGGSIAIQAQSPDPQLLAEIQKIKAIDNHSHPP
                     KVVGPGEKDEDFDALPCDPLEASVPTTTSRPENPQYIAAWKALYGYKYDDASAAHLKE
                     LLETKKRVMEEQGDHFPEWVLDQLGIETELANRIALGRGLQPPRFRWVPFDDALMYPL
                     KNNGLATESPDRTFFFRRETDLLRRYMAEVKVEYLPRTLQDYTTKVVTPVLEMQKRQG
                     AVAIKFEAAYLRSLDFGPPPVTEAMDFAEARAVYSRFISGGVPQKTEYLELQNYLFRF
                     TAREAGRLGMPVHIHTGGGCGTYFSLMTSNPALLESVLNDPSLRKTNFVLIHGGAGAF
                     THYTPYLLMKPNAYTDFSEQTWLIPTRALSKVIREWLEWYPEKVMFGTDLYPNTPEIN
                     WEEIGWQTTQSAREALAIALTGMMEDKEISRERALEIAQMVLHDNAAKLYGWKK"
     gene            complement(4496..4696)
                     /locus_tag="VE783_06895"
     CDS             complement(4496..4696)
                     /locus_tag="VE783_06895"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HYX53160.1"
                     /translation="MPCVPDLCTQKFTRKVGESQRVDRVKSLVPMKRGGQPQEIAAAI
                     PWLLSDEASYVTGTILDVSGGR"
     gene            complement(4827..>5244)
                     /locus_tag="VE783_06900"
     CDS             complement(4827..>5244)
                     /locus_tag="VE783_06900"
                     /inference="COORDINATES: protein motif:HMM:NF012334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HYX53161.1"
                     /translation="EHKILLVTGGGRGIGAATALLAAERGYAVAVNYLRRSDEAEAAV
                     NKVRNRGGRAIAVQADVSSEKDVARMFKTVDRELGPVTALVNNAGTLELQSPIENMDA
                     ARLRRVFETNVIGSFLCAREAVRRMSTDVGARVAAS"
BASE COUNT         1131 a         1570 c         1392 g         1151 t
ORIGIN      
        1 ttttttcagc acttcgcgac gcaacactct ttcgcccgaa cggccaaaac ttcttcagat
       61 ccattctccg tcacctcaac ccgcaaaagt tgattcggtt catgctgccc ttccagccgg
      121 atcttcagga agttatcact cagcgcctcc gtccagccct cgccgcgggt ttgcagggta
      181 atcacgtcaa gcgttcgccc aacaaaactc tcgcggaacg ctcggttctt ttccgcggcc
      241 agtttccgca ggacccgcgt acgctcccgc gcgacctgca ccggcacctg ttcccgcatc
      301 gctgccgcca gcgtccccgg ccgcgccgaa taagtgaaaa catgcagata cgtaaacggt
      361 agccgctcga taaagctcag gttctcctga aagagctcct cagtctcacc gggaaagccg
      421 gtcatcacgt ccgcgccaat cgccgcatcg ggcatggctt cgcgaatctt gcgaatcttc
      481 tccacgtagt gccacggacg gtatttgcga tgcatcagcc gcaggatagt atcgctacct
      541 gattgcagcg gcacatgagc gtgcttcgca atgcgcggcg agcccgccac cagctcgatc
      601 acttcgtcag tccagtccat cggctcaacc gagctgatgc ggaacttctc aatcgaggtc
      661 cgatcgagca gcgcccgcaa caggtcaacg aaccgctgct tgggctccaa gtctcgcccc
      721 cagcggccca gatttatgcc gctcagcacc acctcgcgaa atccggcttc attcaaagcg
      781 ttcgcttccg caattacacg atccagcttc atggaccggc tttgtccgcg cacgctgggg
      841 ataatgcaga acgagcaacg attgtcacat ccgtcctgca ccttcaaatt tggcctcgtc
      901 ttcgatccca actcatcgcc cgaaaaaacc ggtgccgcga tcagctccgt atgagcaaag
      961 atgtcgccca ccatggtgaa tgcgggcgag gaaagctgaa gcgtttcagc ggaaacgaaa
     1021 tccgaacccg ccgaacctaa aatctccggt acctgatgct tgtgagaatt ccctaccacc
     1081 caagtgacgc ctggcaggga agcaatctct tcgggggcgc gctgggcgta gcagcccgtc
     1141 acaaggatcc ttgctttggg gtttgcccgg taggccctgc ggatggccgc gcgcgcatcc
     1201 tggtcggcgg cggcggtcac ggtacatgtg ttcagcacca ccatgtccgc gctggcaggg
     1261 tcttcggcgc ggtcaaaacc acggccagag agctcgcgtt ccagcacggc tccgtcggcc
     1321 tgggtggcgc ggcaaccgaa gttctcaaca aagtacgagg gcacaagagt attatagaga
     1381 ccgtatcact gatcttttcc ttcaagcgac tttcatgtgc agctcacaac ctgaggggct
     1441 gcagggcgca tctgaagcgt tgtcgctgaa gtctctggag tctccatgaa acgtcgcatc
     1501 cttctcgtcg atgatgaact cgcaatcctg ctgaccctga aagccattct ggaaatccat
     1561 ggctttgagg tggagaccgc cgcctccggc aaggaagcca tttccaagct gaagaacaac
     1621 gtctatcaca tggtcattac ggacatgaag atggagcacg agaaggcagg ttatgacgtg
     1681 atccgggctg ccaaaaagac cgactacaat ccggccgtct caatcctgac ggcgtatccg
     1741 ctcctcggcg gcgactggaa gaaagaaggg gcccagtcca tgctggtcaa gcctatgaat
     1801 actgatgatc tgctgcgcca gattgaagcg ctgctaatcc agcatgaaga ccagaagcag
     1861 cgggcgggca aacagctcca ccacccccac ggacagaccc aggcagcaaa aaagcccgct
     1921 tagaagccca aaccattcag aaccccgcta aacccgtttg ggcacacgtc cgcctcgacg
     1981 cggaggctcc tttgatttca ggaactcaga aaggtgtgat caagccgtgg cagcggccgt
     2041 cttccgctgt tgaaagcact cccggcaaaa aaccggtcgt ccctgcgtgg gtttaaacgg
     2101 aacagtagtt tcacgctggc acccggagca gattgccttg gtttccaccc gttgataatt
     2161 tccgccggtc tgcggtaaac ccagcgccgt cgcgcgcttg gatttgcagt tcttgcaccg
     2221 cttcggctca tttttaaact gcttgtcgtg gaagaacagc tgctcgcccg cggtaaagac
     2281 gaaatcagcg ccgcaatcca cgcatttcag actcttatcc tggaactcca tgtaagtgcc
     2341 ccctttcgaa tcactccagg agaccagagg gttgttgggc acatgtgcat tctcccggca
     2401 gtgataccta cccttgggtt cggccctttg cgccggattg ctccgccgca aaaacttgct
     2461 aaataaatcc gtcgaacaat aaaagaccca gaagattcca ggacttgctg tataaacaag
     2521 ccgggccgag gagtttccat cggcccgggt tggtggactt aatcctgctc cctgcgtgct
     2581 ttcttgcgat accgcgtacg tgcaagagct tgtttcatgc ggcgtttctc gcctggcttc
     2641 aaatagtacg agtgccgctt aaattccttg atcgtgtcgt cctgctggac tttgcgcttg
     2701 aagcggcgca aggcgttttc gagcggttcg ccttcctgca accgaacttc agccaattaa
     2761 aatgacacct cccaacctta ccagttggtt acgtgtgagt tttgcagtgt ccattttcca
     2821 agtcaagtgg gaagttaaca aaatttgaca aaagtagtac tagaaaacat tccggtctta
     2881 aattgagaca tttgcttttt taggagcact gaaaatgcaa gctccaccac tgttttttca
     2941 ggttgcaaaa tccttcacac atcatttttt ccagccgtaa agtttggccg cgttatcgtg
     3001 cagcaccatt tgcgcgatct caagggctcg ctcgcggctg atttccttgt cttccatcat
     3061 gccggtcagc gcaatcgcca atgcttctcg ggctgattgt gttgtctgcc agccaatttc
     3121 ctcccagttg atctctggtg tatttggata gaggtcggtt ccaaacatga ctttttccgg
     3181 ataccactcc agccactccc ggattacctt gctcagtgct cgcgttggaa tcagccaggt
     3241 ctgttcggag aagtcagtgt aagcattcgg cttcatcagc agatacggtg tgtaatgagt
     3301 gaacgcgccc gctcctccgt ggatcaggac gaaatttgtt ttgcgtagcg aaggatcgtt
     3361 cagcaccgat tcgagcagcg ccgggttcga tgtcatcagc gagaaatagg tcccgcagcc
     3421 gccaccggtg tggatgtgga ccggcattcc caaccggccg gcttcgcgag cggtaaatcg
     3481 gaatagatag ttttgcagct caaggtattc cgttttctgg ggaacgccac cggagatgaa
     3541 gcgcgagtaa acggctcgcg cctcggcgaa atccattgcc tcggttacag gtggcgggcc
     3601 gaaatcgagc gagcgcaggt aagctgcctc aaacttgatg gccaccgctc cctgtctttt
     3661 ttgcatttcc agaaccggcg tgaccacttt cgtcgtgtaa tcctggagcg tacgcggcag
     3721 atactccacc ttcacttccg ccatgtagcg gcggagcaaa tcggtttcgc gacggaagaa
     3781 aaacgtccgg tcgggcgact cggtggccag cccgttgttc ttcaacggat acattaacgc
     3841 atcatcgaac ggcacccagc ggaagcgtgg cggctgcagc ccacggccca gcgctatgcg
     3901 attggcgagc tcagtttcaa tccccagctg atcaagcacc cactcgggga agtgatcacc
     3961 ctgctcttcc atgaccctct tctttgtctc cagcagctct ttcaagtgcg cggcagaagc
     4021 gtcgtcatac ttgtagccgt agagcgcttt ccatgcagca atgtactgcg ggttctcggg
     4081 gcgggaagtt gtggtgggaa cgctcgcttc cagcggatcg cagggcaacg cgtcaaaatc
     4141 ctcatctttc tcgcctggtc ccaccacctt gggtggatgt gagtgattgt cgatcgcctt
     4201 gatcttctga atttccgcga gcagttgcgg gtcagggctc tgcgcctgaa tagcaatcga
     4261 gccgccgaga aaaattgcca gccaggtgat tcgtttcagc atgaggtaaa gactccatta
     4321 actcaggacc actgagctgt gcgcaaaggg taaatgcgct ttgcggattc tgcaaaggaa
     4381 agtgtgctgg ggaattttga gaaagtcggg gcgaatcgaa actgactcgc ccggaaacca
     4441 cttggacggc ggtatttgtg gcacgcgcct tacgagaaca gaacagtgac gacgttcagc
     4501 gtccgccgga cacgtcgaga atcgttccgg tgacgtaaga agcttcgtcg gagagcagcc
     4561 agggtatcgc cgcggcaatc tcctgcggct ggccgccccg tttcatcggc accagggatt
     4621 tcacgcggtc cacgcgctgc gactcgccca cctttcgcgt gaatttctgt gtacacaaat
     4681 ccgggacgca cggcatttca cgcggatgcc ttcttcggca acttctccgg ccaagccgag
     4741 cgtaaagctg tctatggccc ccttgctggc agcgtaatcc acgtactcac ccgccgcccc
     4801 gtataaagcg gcaatggaag agacgtttac gatgctgcca ccctggcccc cacgtcggtg
     4861 gacatgcggc gaacagcctc gcgtgcgcat aaaaagctgc cgatcacatt cgtttcgaag
     4921 acgcgccgca agcgagccgc atccatattt tcgattggag actgaagctc cagcgtgccg
     4981 gcgttgttca ccagggccgt gactggccca agttctcgat cgaccgtctt gaacatacga
     5041 gccacatctt tttcggaact cacgtcggcc tgcacggcga tagcccttcc gcctctgtta
     5101 cgaaccttat tgacagcggc ttcggcctcg tctgagcgac gcagataatt cacagcgacg
     5161 gcgtagcctc gctcagcagc aagcagcgcc gtggcggcgc caataccgcg tccgccgccg
     5221 gtgaccagca gaattttgtg ctca
//
LOCUS       DASQYP010000215         4963 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_226282, whole genome shotgun sequence.
ACCESSION   DASQYP010000215 DASQYP010000000
VERSION     DASQYP010000215.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 4963)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4963)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4963
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_226282"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..577)
                     /gene="selD"
                     /locus_tag="VE783_06905"
     CDS             complement(<1..577)
                     /gene="selD"
                     /locus_tag="VE783_06905"
                     /EC_number="2.7.9.3"
                     /inference="COORDINATES: protein motif:HMM:TIGR00476.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004756 - selenide, water dikinase
                     activity [Evidence IEA];
                     GO_process: GO:0001887 - selenium compound metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="selenide, water dikinase SelD"
                     /protein_id="HYX53162.1"
                     /translation="MLGKLARQNDPNVLVGFDKADDAGVYKIGAEQALVQTVDFFTPI
                     VDDPYTFGQIAATNSLSDIYAMGGRPLSALAIVCFPDKGDLEVLERILAGGLSKMMEA
                     GCVVIGGHSVRDPEIKFGYSVTGMIHPERVWTNSGARVGDRLIFTKALGTGVISTAIK
                     KGEAKPEWIDAATQSMTTLNAKAAQAAITGKF"
     gene            817..1062
                     /locus_tag="VE783_06910"
     CDS             817..1062
                     /locus_tag="VE783_06910"
                     /inference="COORDINATES: protein motif:HMM:NF040444.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6496 domain-containing protein"
                     /protein_id="HYX53163.1"
                     /translation="MATKKSSSKKSSSSSSKKSSSKKKSSGRKYSKKAGEEVRTEMHH
                     MRSGKHSKKHPIKSRKQAIAIGLSKARKKGAKVPKKK"
     gene            1096..1782
                     /locus_tag="VE783_06915"
     CDS             1096..1782
                     /locus_tag="VE783_06915"
                     /EC_number="3.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024811.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HYX53164.1"
                     /translation="MTGLVAAIFDIDGTLTDSVDIHAMAWQEALRHFHYDVSYERVRR
                     QIGKGGDQLLKTLLSPKDLEAHGEELDKFRGDLFKRKYMDLVKPLSMVPELFQRIREA
                     GVRTVLASSAKKDEVEYYQKLLGIEKLVEQDTSSDDAERSKPHPDIFAAAMQKLGSPP
                     AQQVIAIGDTPYDSQATAAISIPCIGVLSGGWTEQELREAGCMAVFRGPADLFARFDE
                     SPLAQQKRAA"
     gene            complement(1786..2136)
                     /locus_tag="VE783_06920"
     CDS             complement(1786..2136)
                     /locus_tag="VE783_06920"
                     /inference="COORDINATES: protein motif:HMM:TIGR02605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FmdB family zinc ribbon protein"
                     /protein_id="HYX53165.1"
                     /translation="MPIYEYVCKKCHHRFEKIQKFSDRKIKKCPECGGPVEQAIHAPA
                     VQFKGSGWYVTDYAKKGGESKEGSADKSDKKDSGTSKEAASAGKESAGKESTSKEKSG
                     SDDKGKKSHSKKHD"
     gene            complement(2274..2765)
                     /locus_tag="VE783_06925"
     CDS             complement(2274..2765)
                     /locus_tag="VE783_06925"
                     /inference="COORDINATES: protein motif:HMM:NF017758.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferritin-like domain-containing protein"
                     /protein_id="HYX53166.1"
                     /translation="MKLESLQELIVEELQDLYSAENQIIEALPDMIEEASSAELKNAL
                     SEHLEQTRGHVKRLDQIFDQLKADREDKTCKGMEGIIDDNQELLETDAEPEVLDAGMI
                     AGAQRVEHYEIAGYGTVRTYAQLLGKKDWAQLLEQTLQEEKQADQILNGLASRINLEA
                     KAA"
     gene            2857..3720
                     /gene="rsmI"
                     /locus_tag="VE783_06930"
     CDS             2857..3720
                     /gene="rsmI"
                     /locus_tag="VE783_06930"
                     /EC_number="2.1.1.198"
                     /inference="COORDINATES: protein motif:HMM:TIGR00096.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008649 - rRNA methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_process: GO:0000451 - rRNA 2'-O-methylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA
                     (cytidine(1402)-2'-O)-methyltransferase"
                     /protein_id="HYX53167.1"
                     /translation="MTESASKGVLYVVATPIGNLEDITYRAVRVLKEADLIACEDTRQ
                     TRKLLDHYGITGKVISYHEHNEQARAEELVQRLREGAAVAQVSDAGMPGISDPGYRLI
                     TLAIESGISVVPVPGPAAAITALAASGLPTDAFEFRGFLPAKSGQRRTALESLSNSEQ
                     TAIFYEAPHRIRETLADIVAVLGPQRPVVIARELTKIHEEFLRGSAAQLLAIATEREL
                     KGEITLLIGKSQAPQQANSTVDLRQRLQQLMTEQNLDEKAALKLLARETGLSKSAVYR
                     EVQRNAGRAKK"
     gene            3796..>4963
                     /locus_tag="VE783_06935"
     CDS             3796..>4963
                     /locus_tag="VE783_06935"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HYX53168.1"
                     /translation="MSATSLPARPSSRFFWAGIIAVAFFAVPLFDPRIFASSSFLPHS
                     FCYVSDKPLIALHLVCDLLIWLSYVAIAITLAYLVRVARRSIPFHWMFLAFGVFIIAC
                     GFTHLMEVITLWRPVYWLSGYVKLVTAVASVSTAILLPPLVPRIVALNRAAAVSAQMR
                     QELEVSNHELEAFSYSVSHDLRAPLRAIDGFSMAVLEDYANRLPPEAIEDLQRVRAGA
                     ERMSALIDDLLMVSRTTRSEINRQRVNLSEVAEDALTQLRSTDPKRRVEVDIQPNLTV
                     QADPGLMRVLIENLIGNAWKFSGNNPQAHIIFASEQRDNETVFFIRDNGGGFDPAYTN
                     RLFVPFQRLHTSDEFPGTGVGLATAQRIIRRHGGRIWAEAEKNKGATFFFTLPPA"
BASE COUNT          996 a         1498 c         1380 g         1089 t
ORIGIN      
        1 tgaacttgcc ggtgatcgcc gcttgcgcag ctttggcgtt gagcgtggtc atggattgcg
       61 tggcagcgtc gatccactca ggtttggctt cacccttctt tatcgcggtg gagatcacgc
      121 cggtgccgag cgccttggta aagatcagcc ggtcacccac gcgcgcgccg gagttggtcc
      181 agacgcgctc agggtggatc atgccggtca cggagtagcc gaacttgatt tcgggatcgc
      241 gcacgctgtg gccgccgatg accacgcaac cggcttccat cattttggaa agtccgccgg
      301 caaggatgcg ctccagcact tcgagatcgc ccttgtcggg aaagcagacg atggcgagcg
      361 cgctcagcgg acggccgccc atggcgtaga tgtcgctgag cgagttggtc gcggcgatct
      421 ggccgaaggt atagggatcg tcaacgattg gggtgaagaa atccacggtc tgcaccagcg
      481 cctgctcagc gccgattttg tacacgccgg cgtcgtcggc tttatcaaag ccgaccagca
      541 cgttcgggtc attttgccgg gcaagtttcc caagcaccgc gtccagcgcc gccggactca
      601 gcttgctcgc tcaacccgcg gccttgacct gctccgtgag gcgaattggt gtcttcactt
      661 ctgccactgg tgatcattgt aacgggtcgc tttgctttat cccgagcgca gcgagggatc
      721 cctatcgaac ccatactgca tcaggagcat tcgttgctct cacccgctgc caacctgcac
      781 caatcacgca acgtctcagt tacaggggtg gactgaatgg caactaagaa atcctcaagc
      841 aagaaatcaa gctccagcag ctcgaagaaa tccagttcga agaaaaaatc cagcgggcgc
      901 aagtattcga agaaggccgg tgaagaagtg cggactgaga tgcatcacat gcgctccggc
      961 aagcattcaa agaaacatcc gatcaagagc cgcaagcagg caatagcgat cggcctttcc
     1021 aaggcgcgga agaagggcgc caaggtcccc aagaagaagt agccgcgcat atgccgcaga
     1081 acacacactg accgtatgac aggacttgtc gccgcaatct tcgacatcga cggaacgctc
     1141 accgattcag tcgacatcca cgccatggcg tggcaggaag cgctgcgcca tttccattat
     1201 gacgtgagct atgagcgcgt acgccgccag atcggcaaag gcggcgatca gctattgaag
     1261 acgctgctct cgcccaaaga cctggaagcc cacggcgagg agttggacaa attccgcggc
     1321 gacctcttta aacgcaagta catggattta gtgaagccgc tctccatggt gccggagttg
     1381 ttccagcgga ttcgcgaagc aggggtaaga actgtgctgg cctcgtcggc gaagaaagat
     1441 gaggttgagt actaccagaa gctgctcggc atagagaagc tcgttgagca ggacacctca
     1501 tccgacgacg cggagcgcag caagccgcat ccggatatct tcgctgcagc catgcagaag
     1561 ctgggcagtc cgccggcaca gcaggtgatc gcaatcggag acacgcctta cgattcgcag
     1621 gccaccgccg ccatctctat tccgtgtatc ggcgtactca gtggcggctg gacggaacag
     1681 gagctgcgcg aagccggctg catggccgta tttcgcggtc cagcggacct gttcgcgcgc
     1741 tttgatgaat cgccgctcgc gcagcagaag cgggccgcct agaatttaat cgtgcttctt
     1801 gctgtgcgac tttttaccct tgtcgtcaga gccgctcttt tctttgctgg ttgactcttt
     1861 gccggcggac tcttttcccg ctgatgcggc ttccttcgag gtgccgctgt cttttttatc
     1921 ggacttgtcc gccgagccct ctttggactc gccgcccttc ttggcgtagt cagttacata
     1981 ccagcctgag cctttgaact gcaccgcggg cgcgtgaatc gcctgctcta ccgggccgcc
     2041 acattccgga cacttcttga tcttacgatc agaaaatttc tggatctttt caaacctgtg
     2101 atggcacttc ttacacacgt actcgtagat aggcaccgac aatgtccttt tcagaaaaga
     2161 aagaaaggtg atctgtgctg attctaggag tgcctggggc gaagcgtcaa cgaggagagc
     2221 tgggacggga ccccgtcgcg gaggcgcccg tccatgcccg aatagattgg tccttaagca
     2281 gcctttgcct caaggttgat ccggctggcc agcccgttca ggatctggtc tgcctgcttc
     2341 tcttcctgga gagtctgctc cagcagctgc gcccagtctt ttttcccgag cagctgcgcg
     2401 tacgtgcgaa cggttccata tccggcgatc tcgtaatgct caacgcgctg cgcgccggca
     2461 atcatgcctg cgtccagcac ctcaggctct gcgtcggtct ccagcagttc ctgattgtcg
     2521 tcaataattc cttccatgcc tttgcaggtc ttatcttcgc ggtcggcctt gagctggtca
     2581 aagatctggt ccagccgctt cacgtggccg cgcgtctgct ccaggtgctc gctaagggcg
     2641 ttcttcagct cagctgatga tgcttcctcg atcatgtccg gcagcgcttc aataatctgg
     2701 ttttcggctg aatacaggtc ttgcagttct tccacgatga gttcttgcag gctctccagt
     2761 ttcatgggtc ctcctggata atttggcttt ttttatcgta gggtgagatg cgaacccagc
     2821 atcgccggaa gttgctgctc ggttaaactt ttgcaaatga ctgaatctgc ctcaaagggt
     2881 gtgctttacg tggtggccac gcccatcggc aatcttgaag acatcaccta ccgtgcggtt
     2941 cgcgtgctga aggaagctga tctgatcgcc tgcgaagaca cgcgtcaaac ccgtaagctg
     3001 ctcgatcact acggcatcac aggaaaagtc atcagctatc acgagcacaa cgagcaggcg
     3061 cgcgcagaag agctggtgca gcggctgcgt gaaggcgctg ctgtggccca ggtctctgat
     3121 gcaggtatgc ccggcatctc tgacccaggc taccgcttga tcacgctggc gattgagagc
     3181 ggcatatccg tggtgccggt gcccggacca gcagcagcaa tcaccgcgct cgcggccagt
     3241 ggattgccca ctgacgcctt cgagttccgc ggatttcttc ccgccaaatc gggccagcga
     3301 cgcactgcgc tggaatcttt gagcaattca gagcagaccg ccatcttcta tgaagctccg
     3361 caccgcatcc gtgaaaccct ggcagacatc gttgcggtac tcgggccgca gcggccggtc
     3421 gtgatcgcgc gcgagctcac caaaatccac gaagagttcc tgcgcggcag cgccgcccag
     3481 ctactcgcca tcgcaaccga acgcgaactc aaaggtgaga tcactctgct gatcggcaaa
     3541 tcccaagcac ctcaacaggc aaactcaact gttgatcttc ggcaacggct ccagcagctt
     3601 atgaccgaac agaacctcga cgaaaaagca gcgctcaagc tgctagccag ggaaactgga
     3661 ctttccaaaa gcgctgttta tcgcgaagtt cagcgtaacg ccggacgcgc caaaaaataa
     3721 tcctgccggg tggcgggttt tcacccccgg ctgctcagtt taatctgtct gggcattatt
     3781 ctccgcggag gtttcatgtc agctaccagt ctcccggctc ggccatcgtc acgtttcttc
     3841 tgggctggaa ttatcgcggt cgcttttttc gccgtcccgc tgtttgatcc ccgcatcttc
     3901 gcgtcgtcct cattcttgcc acactcgttc tgctacgtca gtgacaagcc gttgatcgcg
     3961 ttgcatcttg tctgcgatct cctgatctgg ctctcttacg tcgccattgc aatcacactc
     4021 gcatacctgg tgcgcgtcgc gcgccgttcc attcctttcc actggatgtt cctcgccttc
     4081 ggcgtcttca tcattgcctg cggtttcacc cacctcatgg aagtcatcac gctctggcgt
     4141 cctgtgtact ggctgtccgg gtatgtaaag ctggtcacag ccgttgcttc agtttccacg
     4201 gcaatcttgc tgccgccgct ggtaccgcgc attgtggccc tgaacagagc ggccgccgtc
     4261 tcggcgcaaa tgcgtcagga gcttgaagta agtaaccatg agctggaggc gttcagttac
     4321 tcggtctccc atgatcttcg cgctccgctg cgcgccattg acggattcag catggccgtc
     4381 ttggaagatt acgctaatcg gcttccacct gaagccattg aagacctcca gcgagtgcgc
     4441 gccggcgctg agcggatgag cgcactgatt gatgacctgc tcatggtgtc gcgtaccacc
     4501 cgctcggaaa tcaatcgcca gcgggtgaat ttgagcgagg ttgcggaaga tgcgctcacg
     4561 cagcttcgtt ctaccgatcc aaaacggcga gtcgaagtcg acatccagcc caacctcacg
     4621 gtccaggcag accccggact tatgcgcgtg ctaatagaga acctgattgg caacgcctgg
     4681 aagttcagcg gcaacaaccc gcaggcccac atcatcttcg catcagagca gcgcgacaat
     4741 gagaccgtgt tcttcattcg cgacaacggc ggcggctttg atccggcata caccaaccgg
     4801 ttgtttgtgc ctttccagcg gttgcacacc agtgacgaat ttcccggaac cggcgttgga
     4861 ctggcgacgg cacagcgcat catccgccgc cacggcggca ggatctgggc agaggcggag
     4921 aagaacaagg gcgccacctt tttcttcacg ctgccccctg ccg
//
LOCUS       DASQYP010000216         4722 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_7863, whole genome shotgun sequence.
ACCESSION   DASQYP010000216 DASQYP010000000
VERSION     DASQYP010000216.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 4722)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4722)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4722
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_7863"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1582
                     /gene="asnB"
                     /locus_tag="VE783_06940"
     CDS             <1..1582
                     /gene="asnB"
                     /locus_tag="VE783_06940"
                     /EC_number="6.3.5.4"
                     /inference="COORDINATES: protein motif:HMM:TIGR01536.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004066 - asparagine synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_process: GO:0006529 - asparagine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="asparagine synthase (glutamine-hydrolyzing)"
                     /protein_id="HYX53169.1"
                     /translation="ARLRGMFGVAVWVQSERRLVLARDRMGIKPVYYCEHQGEIYFAS
                     ELKCIFAHPEVPRRISLDGLNCFLRLNYVPAPYTLVDGIHKLLPGHMLEWRDGRATVQ
                     SYVPEPANAGVPRSIDEACEELDSLLEASIHEQLVSDVPVGIWLSGGLDSSTVLRYAS
                     QISSSPLRTFSITFRGRSFDESDSIAEITRHFGSVHEELNLDETLDLERAIRQIAFYS
                     DEPSADAGALPAWFLAEMTARKVTVVLSGEGADELFAGYLTYKADRYAEWARRIPAAI
                     RRAGLELATLLPVSDDKISLEYKLKRFLHGSLLSPQQAHIFWNGTFTEEEKGRFFRYA
                     DPAPVSGLVSEMKQREGLESYLRFDQRYYLADDILYKVDRMSMAHSLEARPPYLDPRI
                     VDFAARLPERFKLSGSQSKYILRALMKDKLPPGVLRRPKIGFDIPVHDWFRGVLRPLL
                     LETLSQNEVTASGLFRWSGVRQLLSDHLERRANLGYHLWGLMVLLLWMKEWKIGPPLQ
                     AMETRHKHAGVFDPVGSF"
     gene            1501..3324
                     /locus_tag="VE783_06945"
     CDS             1501..3324
                     /locus_tag="VE783_06945"
                     /inference="COORDINATES: protein motif:HMM:NF024629.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 39 protein"
                     /protein_id="HYX53170.1"
                     /translation="MEDRAAVAGDGDAPQARRRLRPGWIVLAVAALVFLLNIISPPRL
                     MDDVDAVQAQIARNMLESGDWVTARLNGVAYLEKAPLVYWTMAGSFRIFGVHDWSARL
                     PLAVCVILLCFVTWRFGRWAFGDEAGMFAGLALSTCIGLYLFTRILIPDAMVTLCITG
                     AIWSWMRLLEDDELNPRRWAAVLGLCFGLGLLLKGLIAVVFPVLAALVYMALTRQLFS
                     ASAWKRLDLYLAIPVALVIAAPWHILAMLRNPPYLEFSMHSGPGEYRGFFWFYFFNEH
                     LLRFMNLRYPRDYNTVPRLWFWLLNLVWLFPWSLFLPGAVKLSYRGNSRASRVRLMAV
                     CWIGAVMVFFTFSTTQEYYSMPIYPALALLIGSTLASGSRTIEIGKRWMAAIAGVIAV
                     SLATLYVWVRNMPAPGDISHALQQHPEMYTLSMGHMGDLTLAAFAYLKAPLLLAAVAF
                     GVIAVAQSVFGQSRRQLFGAALGMIIFFQASRLALVTFDPYLGSHALTQSLQQSPPGQ
                     LIEADAYYAFSSVFFYTNRTALLLNGRMNNLEYGSYAPGAPQVFIDDSRFTTLWREPG
                     RYYLLAYGSDLEHMEKLVGRENLHVVRENGGNYLLTNHTLP"
     gene            3321..4535
                     /locus_tag="VE783_06950"
     CDS             3321..4535
                     /locus_tag="VE783_06950"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HYX53171.1"
                     /translation="MIQWHVSQTKEALLLAWQALIADKVKASLTMLGVMIGSMSLVLV
                     VTIASTGKSYIITQIEGIGSNLAYATLDRNGAVVIPEDELTFEDLDHIRQEQPLVVAA
                     AGTYDVPVDVTISGKAVHARLVGVTEGFQQIRRLTVLAGRYFDQEDFSSRAPACLITE
                     AIARRRSNVHGLIGQSLLFGRFRCTVIGMFKEGVPTFGQSEIQQETVLVPWPLVSSIT
                     GDKFLQVIYAQTASNDQVPALTQTINRVLRSRHRKQARYEVQNLSSVLRTAENVSLGL
                     SLVLLGVAVLTLVTAGTGIMNIMLVNIAQRKKEIGLRKALGARPSEIRLQFLMEAGFI
                     SLAGAVLGALIAVGAVWLAAGVIDGLTGFEISWLAVAAALLLSTAVGAGFGYQPASRA
                     ASLNPVEALRAD"
BASE COUNT          861 a         1341 c         1426 g         1094 t
ORIGIN      
        1 tgcccggctg cgcggcatgt ttggcgtggc cgtgtgggtg cagtcagagc gacggctggt
       61 tttggcccgc gaccgcatgg gcatcaagcc cgtctactac tgtgagcatc agggcgagat
      121 ttactttgct tccgagctca agtgcatctt cgcgcacccc gaggtgcccc gccgcatctc
      181 gctcgacggc ctgaattgct ttttgcggct caattacgtg cccgcgcctt acaccctggt
      241 ggacggcatt cataagctgc ttcccggcca catgctggaa tggcgcgacg gccgcgccac
      301 ggtccagtcg tatgttcccg aaccggcgaa cgccggcgtg ccgcgcagca ttgatgaagc
      361 atgcgaggaa ctggacagtc tgctcgaagc ttccatccac gagcagctcg tttcggatgt
      421 cccggttgga atctggctca gtggtggcct cgactcatcc accgtcctgc gctacgcctc
      481 ccagatcagt tcctcaccgc tgcggacatt ttcgatcacc ttccgcggac gcagcttcga
      541 tgagagtgac tcgattgccg agatcacgcg ccatttcggc agcgttcatg aagagctgaa
      601 cctggacgaa acgctggacc tggagcgcgc gatccgccag atcgcgttct actctgatga
      661 gcccagcgcg gacgccgggg ctctgcctgc atggtttttg gcagagatga ctgcccgcaa
      721 agtcaccgtg gtattgagcg gagaaggggc agacgagctg tttgccggtt atctgaccta
      781 taaggcagac cgctatgcgg agtgggctcg gcgtattccg gccgccattc ggcgtgcagg
      841 gctcgaacta gccaccctgt tgcccgtttc cgacgacaaa atcagtcttg agtacaagct
      901 gaagcgtttc ctgcacggat cgctgctctc gccgcagcag gcgcatatct tctggaatgg
      961 cactttcacc gaagaagaaa agggccgctt cttccgttac gccgatccgg cgccggtttc
     1021 tggactggta agcgagatga agcagcgcga agggctggag agttatctgc gcttcgacca
     1081 gcgctactac ctcgcggatg acattctcta caaagtggat cgcatgagca tggcgcattc
     1141 gctcgaagcg aggccgccat atctcgatcc acggatcgtc gactttgctg cgcgacttcc
     1201 cgagcgcttc aagttgagcg gttcacagtc gaaatacatt ctgcgcgcat tgatgaagga
     1261 caagctgccg ccgggcgtgc tgcggcggcc gaagatcggt tttgacattc cggtacatga
     1321 ttggttccgt ggcgtgctcc ggccgctctt gctcgagacg ctgtcacaaa acgaggttac
     1381 ggcttccgga ttgttccgct ggagcggcgt taggcagttg ctcagcgatc atttggagcg
     1441 tcgcgcgaac ctggggtatc acttatgggg attgatggtc ttgctgttgt ggatgaaaga
     1501 atggaagatc gggccgccgt tgcaggcgat ggagacgcgc cacaagcacg ccggcgtctt
     1561 cgacccggtt ggatcgttct agccgtagca gcgctcgtat ttctgctcaa catcatcagc
     1621 ccgccgcgcc tcatggacga tgttgacgcg gtgcaggcgc agatcgcccg caatatgctc
     1681 gaatccggtg actgggtcac cgcgcgcctg aacggcgtgg catatctgga aaaggctccg
     1741 ctggtctatt ggaccatggc gggctcattc cgcatttttg gcgtgcatga ttggtccgcg
     1801 cgcctgccgc ttgctgtttg cgtcattctg ctttgttttg tgacctggcg ttttggacgc
     1861 tgggcgtttg gcgatgaggc aggaatgttt gccggtctgg cactctcgac ctgtatcggc
     1921 ctctatctct ttacccgcat tctgatcccg gatgcgatgg ttacgctctg catcaccggc
     1981 gcaatctggt cgtggatgcg cctgctggaa gatgatgagt tgaatccgcg acgttgggca
     2041 gcggtgctcg gcctgtgctt tggcctcggg ctgctgctga agggactgat tgcggttgtc
     2101 tttccggtgc ttgcggcact ggtgtacatg gcgttgacgc gtcagctgtt ttcagcgtcg
     2161 gcctggaaac ggctggatct gtatctggcg attcccgtgg cgctggtcat tgcagcgcca
     2221 tggcacatcc tggccatgtt gcgcaacccg ccatacctgg aattttcaat gcacagcggc
     2281 ccgggcgagt atcgcggctt cttctggttc tactttttca acgaacatct gctccgcttc
     2341 atgaacctcc ggtatccccg cgattacaac acggttcccc gtctgtggtt ctggctctta
     2401 aacctggtct ggctgttccc gtggtcgctc tttctgccgg gagcggtgaa gctgagctac
     2461 cgcggaaatt cgcgggcatc gcgtgtgcgc ttgatggccg tgtgctggat cggagcggtg
     2521 atggtctttt tcaccttctc caccacgcag gagtactact ccatgccgat ctatcccgcg
     2581 ctggcgttgc tgatcggttc aactctggcc agcggctcgc gaaccattga aatcgggaaa
     2641 agatggatgg cagctattgc cggagtgatc gcagtctcgc tcgcgacttt gtatgtgtgg
     2701 gtcaggaaca tgcctgcacc gggcgacatt tctcatgcac tccagcagca cccggagatg
     2761 tatacgctct ccatggggca catgggcgat ctgacgctcg ctgcattcgc ctatctcaaa
     2821 gccccgctgc tgcttgcagc ggtggccttt ggcgtgattg cagtcgcgca atcggtcttc
     2881 ggccagagca ggcgtcagct tttcggcgct gcgctgggga tgatcatctt ctttcaggcc
     2941 tcccgattgg cgctggtgac ttttgacccg tatttggggt cgcatgcgct gacgcaaagc
     3001 ctgcagcaaa gcccgcccgg acagctgatt gaagccgacg cctactatgc gttttcctcc
     3061 gtcttttttt atacgaatcg taccgcgttg ttgctgaatg gacgaatgaa caacctggag
     3121 tacggctctt acgcgccggg tgctccgcaa gtgttcattg atgattcgcg cttcaccacg
     3181 ttgtggcgcg agcccggccg atattacctg ctggcctatg gaagcgatct tgaacacatg
     3241 gaaaaactgg ttggccgcga aaatctgcac gttgtgcggg aaaacggcgg aaactacctg
     3301 ctcaccaatc acacgctgcc atgattcaat ggcatgtctc gcagactaaa gaagcgctgc
     3361 ttctggcatg gcaggctctg attgccgaca aagttaaggc ctcgctcacc atgctgggcg
     3421 tgatgatcgg cagcatgtcg ctggtgctgg tggtgacgat cgcctccacc ggtaagagct
     3481 acatcatcac ccagattgaa gggattggct caaaccttgc ctatgcaacg ctggaccgca
     3541 acggagcagt ggtaatccct gaagacgagc ttaccttcga agacctggat cacatccgcc
     3601 aggaacagcc gctggtggtg gcggctgccg gaacgtatga cgtgccggtg gatgtgacga
     3661 tcagcggtaa agcggttcac gcgcgccttg tgggagttac tgagggtttt cagcaaatcc
     3721 ggcgactcac ggtgttggcc ggacgttatt tcgatcagga ggatttctca tcccgcgctc
     3781 cggcatgcct gatcaccgaa gcgattgcgc gcagaagaag caacgtgcac ggcctgattg
     3841 ggcaatccct gctgtttggc aggttccgct gcacggtgat cggcatgttc aaggaaggcg
     3901 tacccacgtt tggacagtca gaaatccagc aggaaacggt ccttgtgccg tggcctcttg
     3961 tttcctcgat taccggggac aaattcctgc aggtgatcta cgcgcagacg gcttccaatg
     4021 accaagttcc ggcgcttacc cagactatca atcgcgtgct gcgcagccgg catcgaaagc
     4081 aggcgcgcta tgaagtccag aatctttctt cggtcttgcg aacggctgaa aacgtttcgc
     4141 tggggctaag cctggtgttg cttggggtgg cggttctgac gctggtgacg gccggcacgg
     4201 gaatcatgaa catcatgctg gtgaatatcg cgcaacggaa aaaagagatc ggcctgcgca
     4261 aggcgctcgg cgcgcgcccc tcggaaatac gtcttcagtt cctcatggaa gcaggcttca
     4321 tcagcttggc cggcgcggtg cttggagcct tgattgccgt tggggcggtc tggttggctg
     4381 ccggagtcat tgatggattg accggcttcg aaatttcatg gctcgcggtg gcggcggccc
     4441 tgctgctttc gaccgcagta ggcgccggat ttggctacca gccggccagc agggcagcta
     4501 gtctgaaccc agtagaagcg ttgcgggcag actgattcaa gaacctaatc gactcgccct
     4561 aatttcttat tatgagagtc aaatctccac ttgagcaggc gccacatcag tgcgctgcgc
     4621 acgatgccaa ttttagggtt gccggtgggc gccgccgaga gtttcagagt cccagggggt
     4681 atcagctcac gccccgccgc aagcgcgtct tcaggaacac tt
//
LOCUS       DASQYP010000217         5343 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_183442, whole genome shotgun sequence.
ACCESSION   DASQYP010000217 DASQYP010000000
VERSION     DASQYP010000217.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 5343)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5343)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5343
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_183442"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..432
                     /locus_tag="VE783_06955"
     CDS             <1..432
                     /locus_tag="VE783_06955"
                     /inference="COORDINATES: protein motif:HMM:NF014793.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016620 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors, NAD or NADP as
                     acceptor [Evidence IEA];
                     GO_function: GO:0046983 - protein dimerization activity
                     [Evidence IEA];
                     GO_process: GO:0008652 - amino acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Asd/ArgC dimerization domain-containing protein"
                     /protein_id="HYX53172.1"
                     /translation="VQVAENLSVYSVFNHRHTGEILEQLGLAPEQLVFTPHLLPIPRG
                     ILSTIYVKLREKQTSQLIETWLRNFYGGSPWVRVFAHGKLPQIQYSLYSNYCDIGFTL
                     APDGRRMVLVSCLDNLMKGAAGQAVQNMNVVFGWNEEEGLK"
     gene            429..1211
                     /gene="argB"
                     /locus_tag="VE783_06960"
     CDS             429..1211
                     /gene="argB"
                     /locus_tag="VE783_06960"
                     /EC_number="2.7.2.8"
                     /inference="COORDINATES: protein motif:HMM:TIGR00761.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003991 - acetylglutamate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006592 - ornithine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetylglutamate kinase"
                     /protein_id="HYX53173.1"
                     /translation="MKIVVKLGGATLEDAALLQRAALAIKQLAVEHQVGVVHGGGAAL
                     TRVLNQVGKASEFIDGLRVTDAETRDFAVMVLAGHMNKKLVAALAAVHQPAVGMCGGD
                     GLAFRARKKAPNGHDLGFVGEISSVEPRWIETIWQQGCIPVISSVALGSDGQYYNVNA
                     DQMASACAVACHANALIFLTDVPGVKGADGLVIRWLNLHTAAELTQQSVINGGMLPKL
                     DACKSALINGVNRVRILPATEVDMLPDFYFTKIESGTEVLVA"
     gene            1208..2458
                     /locus_tag="VE783_06965"
     CDS             1208..2458
                     /locus_tag="VE783_06965"
                     /inference="COORDINATES: protein motif:HMM:NF002325.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate aminotransferase family protein"
                     /protein_id="HYX53174.1"
                     /translation="MNLEQVKKAESKLLLATYDRYPVLLHKGNGVHVFDDKGRKYLDF
                     LSGIGVNALGHNHPVISKTIARQAKLLIHTSNLFYHEYQARLAAALTKISGMDRAFFT
                     NSGTEAWEGALKVARAYAKSNAAAGSEPKWRILALEHAFHGRTFGALATTHKEKYRAP
                     FTPVVPGVEFVKFNDVHDLEQKFDSTVCAIGFEFVQGEGGIRPVSREFAAKARELANK
                     HGALLIADEIQSGMGRTGKWFGYQHYGIPPDMVTVAKPIAGGLPLGALLLSEKASQCI
                     HPGMHGTTFGGGPLACSVALELIKVIEKQKLLKHVQKTGDYMATKLNALKKKHPAIIE
                     IRGLGLMVGVEFESADLAKAAFQSMLEQRVILNRTDETVLRFLPPFIVKKKHVDEVIE
                     KLDQALSSQAKKEAAVTTASRRTR"
     gene            2455..3468
                     /gene="argF"
                     /locus_tag="VE783_06970"
     CDS             2455..3468
                     /gene="argF"
                     /locus_tag="VE783_06970"
                     /EC_number="2.1.3.3"
                     /inference="COORDINATES: protein motif:HMM:NF001986.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004585 - ornithine carbamoyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0042450 - arginine biosynthetic process via
                     ornithine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ornithine carbamoyltransferase"
                     /protein_id="HYX53175.1"
                     /translation="MTTSARLFDYAALAPQPRPAMTRDLISVQDFSPEETRGLFELTN
                     IIKHRPADFRGALAGKQLVLFFEKASLRTRLTFEAGMASLGGTSLFMDQTRSRLGERE
                     PVCDIARNVERWVDGVVLRTYAHETITEMAANASIPVINALSDLEHPCQAYADFFTLQ
                     EKFSDLDRVHMAYVGDGNNVAHSLMLAAATLGTSISVATPEGYEPNQDITAAAKQIGR
                     STGAFIEITNDPAKAVTGANAIYTDVWASMGQEDEAAERAKIFAPFQVNHSLFEMAAP
                     DAYFMHCLPAHRGEEVTADVIDSPRSIVFDQAENRMHVQKAILLLLLGSGMGRVSSRS
                     NHA"
     gene            3461..4684
                     /locus_tag="VE783_06975"
     CDS             3461..4684
                     /locus_tag="VE783_06975"
                     /EC_number="6.3.4.5"
                     /inference="COORDINATES: protein motif:HMM:TIGR00032.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004055 - argininosuccinate synthase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006526 - arginine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="argininosuccinate synthase"
                     /protein_id="HYX53176.1"
                     /translation="MREKVVLAYSGGLDTSIIIPWLKENYNCDVIAMIADVGQGDDID
                     AVIDKAYKTGAVKVVVEDLREEFLNEYVYPALRAGAVYEHKYLLGTSLARPVIAKHQV
                     EVALRENATALAHGCTGKGNDQVRFEHAFQALAPELKVIAPWREWSLKSREDCLDYAD
                     QHGIQVTASREKIHSRDRNIWHLSHEGGELEDPANAPFESTWQLTKSPQEAPDREETV
                     TIGFQQGTPVSVNGQKLDAISLVELLNEIAGRNAIGRVDLVENRFVGIKSRGCYETPG
                     GTLLLTAHRELEALCLERDLSHFKQQIALKYAELVYYGLWFTPLREALDAFVAETQKD
                     VTGSVTLKLYKGNVSIGSRESEFSLYRTDLSSFTMSESYNQKDAEGFIRILGLPARSM
                     ARLKQQKNKPAEIAK"
     gene            4687..>5343
                     /locus_tag="VE783_06980"
     CDS             4687..>5343
                     /locus_tag="VE783_06980"
                     /inference="COORDINATES: protein motif:HMM:NF012432.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lyase family protein"
                     /protein_id="HYX53177.1"
                     /translation="MWSGRFRQPLDPRFEQWQRSFPFDRRLLTFELAASRAHALALRA
                     AGVLSADEQKLVLSGIDEIGRIAGSHPKFLDDNEAEDVHHFVEKQLVALIGETGKKLH
                     SGRSRNEQIATDLRLFVREEIEQLRSLLGGFLQTLLDRAEQNATAVMPAYTHLQRAEP
                     VLVSHWLLAYFQMFWRDAERLLDCRKRLNECPLGSGAIAGAPLPLDRNIASRELGFDA
                     P"
BASE COUNT         1140 a         1590 c         1582 g         1031 t
ORIGIN      
        1 gtgcaggtgg cggagaacct ctctgtatat tcagtgttca atcatcggca caccggagaa
       61 attctggagc agcttggcct tgcgccggag cagctggttt ttacgccgca tttgctgccg
      121 atcccgcggg gcattctctc caccatctac gtgaagctgc gcgagaagca gacatcgcag
      181 ctgatcgaaa catggctgcg caacttctac ggcggctcgc cgtgggtgcg cgtcttcgct
      241 cacggcaagc tgccacagat tcagtattcg ctctatagca actattgcga tattggtttc
      301 acccttgcgc cggacggccg ccgcatggtg ctggtttcct gcctggacaa cctgatgaaa
      361 ggcgcagccg ggcaggcagt acagaacatg aacgtggtgt ttggctggaa tgaagaggag
      421 gggctgaaat gaaaatcgta gtcaagctcg gtggcgccac tctggaggac gccgctcttc
      481 tgcaacgcgc ggctctggca ataaagcagc tcgccgtaga gcatcaggtc ggcgtggttc
      541 acggcggcgg tgcggccctt acccgcgttc tcaaccaggt tggcaaggcc agcgagttca
      601 ttgacggcct gcgcgtgacc gatgccgaga cccgcgactt cgccgtaatg gtcctggccg
      661 gccacatgaa caaaaagctc gttgccgcgc tcgctgccgt ccatcagccg gccgtcggca
      721 tgtgcggcgg cgatggcctc gccttccgcg cgcgcaaaaa ggctcccaat ggccacgatc
      781 tcggcttcgt cggcgaaatc tcctcggtcg agcctcgctg gattgaaacc atctggcagc
      841 agggctgtat ccccgtgatt tctagcgtag ctctaggtag tgacggccag tattacaacg
      901 tgaatgccga tcagatggcg tcggcgtgcg ccgtcgcctg ccacgccaac gcgctgatct
      961 ttcttacgga cgttcccggc gtgaagggcg cagacggtct ggtgatccgc tggctgaacc
     1021 ttcacaccgc cgccgaactc actcagcagt ccgtgatcaa tggtggcatg ctccctaaac
     1081 ttgacgcgtg caagagtgcg ctcatcaacg gcgtaaaccg cgtgcgcata ctcccggcaa
     1141 ctgaagtgga tatgctgccg gatttttatt tcaccaagat tgaatcaggc acggaggtgc
     1201 tggtcgcgtg aacctggaac aggtaaagaa ggccgaatca aagctgttgc tggcgaccta
     1261 tgatcgctat ccggtgctgc tgcacaaggg caacggtgtg cacgtatttg atgacaaggg
     1321 ccgcaagtat ctcgacttcc tgagcggtat cggcgtgaac gcgctgggcc acaaccaccc
     1381 ggtcatcagc aagaccatcg cgcgccaggc aaagctgctg atccacacgt cgaatctgtt
     1441 ctatcacgag taccaggcgc gccttgcggc agcgcttacc aagatctccg gcatggaccg
     1501 tgccttcttc accaatagtg gaacagaagc atgggaagga gcgctgaaag ttgcgcgcgc
     1561 ttatgcaaag tctaacgccg ccgcaggcag cgaacccaag tggcgcatct tggccctgga
     1621 gcatgccttt catggccgga cattcggcgc cctggcgacc acgcacaagg aaaaatatcg
     1681 cgcgccgttt acgccggtcg tgccgggtgt ggagtttgtg aagttcaatg acgttcacga
     1741 tctcgaacag aagttcgact ccacggtctg cgccatcggc ttcgagttcg tgcagggtga
     1801 gggcggaatc cgcccggtga gccgcgagtt tgccgcgaaa gcgcgtgagc tcgccaataa
     1861 acatggcgct ctgctcatcg ccgacgaaat tcagagcggc atgggacgca ccggcaagtg
     1921 gttcggctat cagcattacg gaatcccgcc ggacatggtt acggtggcca agccgattgc
     1981 gggcggcctg ccccttggcg cattgctgct cagcgaaaaa gcgtcacagt gtattcatcc
     2041 cggcatgcat ggaaccacct tcgggggagg tccgctggct tgcagtgttg cgctggaact
     2101 catcaaggtc atcgaaaagc agaagctgct caagcacgtg cagaaaaccg gtgactacat
     2161 ggccacaaag ctgaatgcgt tgaagaagaa gcatccggcg atcatcgaaa ttcgcggtct
     2221 cggtctcatg gtcggcgttg aattcgaatc ggccgatctc gccaaagccg ctttccagag
     2281 catgctggag cagcgcgtga tcctgaaccg gactgacgag acggtgcttc gcttcctgcc
     2341 gccgttcatc gtcaagaaaa aacacgtgga tgaggtgatt gaaaagctgg accaggcatt
     2401 aagcagtcag gccaaaaaag aagcagcagt gactaccgcc tcccggagga caagatgaca
     2461 acgtcagccc gactttttga ctacgccgca ctcgcgccgc agcccaggcc ggccatgacc
     2521 cgcgacctga tctcggtcca ggatttttca cccgaggaga cgcgcggcct ctttgagctg
     2581 accaacatca tcaagcaccg ccctgcggac ttccgcggcg cacttgccgg caagcaactt
     2641 gttctcttct tcgagaaggc ctcactgcgc acacggctga cctttgaagc cggcatggcg
     2701 agcctcggcg gaacgtcgct cttcatggac cagacgcgct cccgcctcgg cgaacgagaa
     2761 ccggtatgcg acatcgcccg caacgtggag cgttgggtgg atggtgtggt gctgcgcact
     2821 tacgcgcatg aaaccattac cgagatggct gcgaatgcca gcattccggt aatcaacgcc
     2881 ctgagcgatc ttgagcatcc ctgtcaggct tacgctgact tcttcactct gcaggagaaa
     2941 ttcagcgatc tcgaccgcgt gcacatggcc tatgtgggcg atgggaacaa tgtagcgcac
     3001 tcgctgatgc tcgcggccgc gacgctgggc acaagcatct ccgtcgcgac gcccgaaggc
     3061 tacgagccga accaggacat caccgcggca gcgaagcaga tcggccgcag caccggcgcg
     3121 ttcattgaga taaccaatga tcccgccaaa gcggtgaccg gagccaatgc aatctacacc
     3181 gacgtctggg ccagcatggg tcaggaagat gaggccgccg agcgtgccaa aatctttgcg
     3241 cccttccagg tcaaccattc gctctttgaa atggcggcgc cggacgcgta cttcatgcat
     3301 tgcctccccg cacaccgcgg cgaggaagtg acggcggacg tgatcgattc gccgcgctcc
     3361 atcgtctttg atcaggcgga gaaccgcatg cacgtgcaga aagcgatttt attactgttg
     3421 ctgggcagcg gcatgggccg tgtgtcctca aggagcaatc atgcgtgaga aagtagttct
     3481 ggcatactca ggcggtctcg acacctccat catcattccg tggctgaaag aaaactataa
     3541 ctgtgacgtg atcgccatga tcgccgacgt gggtcagggc gacgacatcg atgccgtcat
     3601 cgacaaggcg tacaagaccg gcgccgtgaa ggttgtcgtc gaagatcttc gcgaggagtt
     3661 tctaaacgaa tacgtctatc ccgcgctccg cgccggcgcg gtgtacgagc acaaatattt
     3721 gcttgggact tcgctcgcgc ggcctgtgat cgcgaagcat caggttgaag ttgcgctgcg
     3781 cgagaacgcc actgctctgg cccacggctg cactggaaaa ggcaacgatc aagtccgctt
     3841 cgagcacgcc ttccaggcgc tggctccgga gctgaaagtt atcgcgccgt ggcgcgagtg
     3901 gagcctcaag tcgcgcgaag actgtctcga ttacgccgat cagcatggca ttcaggtcac
     3961 ggccagccgt gaaaagatcc atagccgcga tcgcaatatc tggcacctga gccacgaagg
     4021 cggcgagctg gaagatccgg ccaatgcgcc attcgaaagc acatggcagc tcaccaagtc
     4081 gccgcaggaa gcgcccgatc gcgaagagac cgtgaccatc gggttccagc agggaactcc
     4141 agtctcggtg aacggacaga agcttgacgc aatatcgttg gtcgaactac tgaacgaaat
     4201 cgccggccgt aatgccatcg gtcgggttga tctcgtggag aaccgctttg tcggcatcaa
     4261 atcacgcgga tgctacgaga cgcccggcgg cacgctgctg ctcaccgcgc atcgcgaact
     4321 cgaggccctc tgtctggagc gcgacctctc gcacttcaag cagcagatcg cactgaagta
     4381 tgccgaactg gtttattacg gcctgtggtt tacgccactg cgggaagcgc tggatgcttt
     4441 cgtggccgaa acacagaaag acgtcactgg ttccgtcacg ctcaagctgt acaaaggcaa
     4501 tgtctcgatc ggcagccgcg agtcagagtt ctcgctttat cgcacagatt tgtcttcatt
     4561 caccatgagc gaaagctaca accagaagga tgcggaaggc ttcatccgga ttctcgggct
     4621 gccggcgcgc tctatggctc ggctgaaaca gcagaaaaac aaaccggcgg agatcgccaa
     4681 gtgaagatgt ggtccggcag attccggcag ccgcttgatc cgcggttcga gcagtggcag
     4741 cggtcgtttc cgttcgaccg ccgtctgctg accttcgaat tggcagcgag ccgcgcgcac
     4801 gctctggcgc tgcgcgctgc cggagtcctc tctgccgacg aacagaagtt ggtactctcc
     4861 ggcattgatg aaatcggccg cattgccggg agccatccca agtttctcga tgacaatgaa
     4921 gccgaagatg ttcatcattt cgtcgagaag cagttggttg cgctgatcgg cgaaacaggg
     4981 aagaagctgc acagcggacg cagccgcaac gagcagatcg ccactgacct gcggctcttt
     5041 gtgcgcgaag aaatcgagca gcttcgttcg ctgctgggcg gcttcctgca aactctgctg
     5101 gaccgcgcgg aacaaaacgc cacagccgta atgccggcgt acacgcacct gcaacgtgcc
     5161 gaacctgtgc tggtgagcca ctggctttta gcttatttcc agatgttctg gcgcgatgcc
     5221 gagcgcctgc tcgactgccg caagcgtctc aacgaatgcc cgctgggctc tggcgcaatc
     5281 gccggcgctc cgttgccgct ggaccgcaac atcgcctcgc gcgaactcgg cttcgacgca
     5341 cca
//
LOCUS       DASQYP010000218        21098 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_75519, whole genome shotgun sequence.
ACCESSION   DASQYP010000218 DASQYP010000000
VERSION     DASQYP010000218.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 21098)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 21098)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..21098
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_75519"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..438
                     /locus_tag="VE783_06985"
     CDS             <1..438
                     /locus_tag="VE783_06985"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53178.1"
                     /translation="GQEYDEENPFQFFTNYGDPTLQKAVTEGRRSEFKDFDFQNVPDP
                     QDRTTFERSRLNWAAAEGENPKLKWYASLLELRNKHVTNAPRTCRAELVDGIIRMQIP
                     AEDSRLKAFARIRGQAPLPDLDGWKKVLCEEAEQYAVTVWEKG"
     gene            complement(462..1256)
                     /locus_tag="VE783_06990"
     CDS             complement(462..1256)
                     /locus_tag="VE783_06990"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53179.1"
                     /translation="MLLICLAGCKHQQPPAAAKGQPVHAASGTKWKLVEEFDYSWQKG
                     LPVHFILEKPEPYDAPGDFTRLRLQMKGQPEFSLSNEDGWIEYNSQEQRSPVYANLSR
                     ENLARSKYVLILPDSGDPALSPLLFLRSWAYASDPERLHVIGFRANSKPDVIFNELFD
                     LTEFSDVDQDGSRELVGVPCLSEDISGRNGEVTTYTPFRVYKISRPALGVAVLSLELS
                     EAYNVRNNGGWAGAECSNEYAIYRAKNKKPRVLPVKEAQKLVTASN"
     gene            complement(1355..2776)
                     /locus_tag="VE783_06995"
     CDS             complement(1355..2776)
                     /locus_tag="VE783_06995"
                     /inference="COORDINATES: protein motif:HMM:NF014081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HYX53180.1"
                     /translation="MIRRLLAALFVICCAAASWAQRQPESPKDYIREQSRVIALEHVR
                     VMDGTGAPAKADQTIVISGGKIAAIGAAGSVQVPADAKHIDFSGHTALPGLVGMHDHL
                     FYPAAGGLYHDMPFTFPRLYLALGVTTMRTTGSIEPYFDLELKKGIDEGKLIGPKMNV
                     TGPYLEGEGAFTRQMHAIKDPEDARRTVAYWVDEGVRSFKAYNYITRAELKAAIDEAH
                     KHGIKVTGHLCSVGFREAAELGIDDLEHGLTVDTEFYPDKKPDVCPNPTQAVIAANKL
                     DVNGPEIQKTINTLVQHHVAVTSTLPVFEQFVPSRPDVPQAAQQLFSPEALKAYQENR
                     KRVVERKDSPWPTMFQKEMEFERAFVKAGGTLMAGLDPTGIGGVIAGYGDIREVELLV
                     DAGFTPAEAIKIATLNGAEFLGEAEHIGSLAPGKQADILIVKGDPSTKISDIENTELV
                     FKDGIGWDSKKLIESVKGQVGTR"
     gene            3762..5567
                     /gene="lepA"
                     /locus_tag="VE783_07000"
     CDS             3762..5567
                     /gene="lepA"
                     /locus_tag="VE783_07000"
                     /EC_number="3.6.5.n1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016291381.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translation elongation factor 4"
                     /protein_id="HYX53181.1"
                     /translation="MDRSHIRNFAIIAHIDHGKSTLSDRLLELTGALSQREMQAQVLD
                     AMDLERERGITIKAHAVRMKYVAQNGEEYQLNLIDTPGHVDFSYEVSRSLASCEGALL
                     VVDASQGVEAQTLANAYLAINHGLEIIPVINKIDLPSADIPRVKEMIEQTVGLDTKDA
                     MLVSAKSGQGVPELLEAIVKRLPPPKGNPEHALQALIFDSWFDPYRGVIVLTRLFEGT
                     LRKGMKVRLWWNGKVLDVETLGVLTPKPVEIDELVAGEVGFMIANNKTVSDTKIGDTI
                     TDDARPAIEPLPGFEELKPMVFAGLYTVDAHEHTALREALEKLRLNDSSFFFEPESSA
                     ALGFGFRCGFLGLLHMEIIQERLEREFGLDLITTAPGVRYTITKTDGEKVEVDNPSRW
                     PDQSEIAKIEEPVILATILTNEEYVGGILKLVEEKRGRQKAFEYVSASRVMLSYELPL
                     NEIVLDFYDRLKTVSRGYASLDYHLAGAWESPMVKLDILVAGDPVDALSIIVHRDFAY
                     ERGRALVSKMRELIPRQMFEVPIQASIGAKIIARETVHAIRKNVLAKCYGGDITRKRK
                     LLEKQKEGKKRMKRIGKVDIPQEAFLAVLKVGEGA"
     gene            complement(5844..6554)
                     /locus_tag="VE783_07005"
     CDS             complement(5844..6554)
                     /locus_tag="VE783_07005"
                     /inference="COORDINATES: protein motif:HMM:NF015506.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0031992 - energy transducer activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="energy transducer TonB"
                     /protein_id="HYX53182.1"
                     /translation="MFRDSLLENSLTTRKRWPVLLAFTLEVLVGAAMVAIPLLSSGVI
                     PVSAHAPIYSPLMDVSTEPEVRHQPDHSGNHGPTMPASNVVTIVNTHPMLTIGHPRPD
                     ATKTGEIVSVPKGSKSASDMPNLDGGCDHCSSVSTEPIKRMRYSTISEGQLIHRVEPA
                     YPRIAIMTRQQGEVKLHAIIGRDGSIQNLAVESGLPLLAAAAVEAVKQWRYRPFLLNG
                     QPVEVETTITVNFRRSGD"
     gene            complement(6681..7310)
                     /locus_tag="VE783_07010"
     CDS             complement(6681..7310)
                     /locus_tag="VE783_07010"
                     /inference="COORDINATES: protein motif:HMM:NF015871.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OmpH family outer membrane protein"
                     /protein_id="HYX53183.1"
                     /translation="MSIAALAQGAAAPAAASAPAGPPATKIGVVNVQDAILATNEGKK
                     EFDSLEKRFTPKQAELKNANDELDGLKKQFQAQSDKLSDDERNSRAKAIETKQKSLQR
                     NYEDAQAEFQQAQQEVVNRIGSKMLNTLEKYAKTNGYAVILDVSNPQTPVLWAAQSNI
                     ITKELVDAYNVDNPATPPPTSASAPAPKPAAGAANRPAAPGATSTPKKP"
     gene            complement(7438..8052)
                     /locus_tag="VE783_07015"
     CDS             complement(7438..8052)
                     /locus_tag="VE783_07015"
                     /inference="COORDINATES: protein motif:HMM:NF015871.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OmpH family outer membrane protein"
                     /protein_id="HYX53184.1"
                     /translation="MSFKLTSAVSACLLFMGTAALGSAQQAATGPQKVGIANIQAAII
                     STNEGKKEAEAVEQRFASRQSQLRAENDAIEKMKQELQTQGDKLSESERNSRVATLQT
                     RQKTFQRSYEDYGTEVQQAENEVLNRLAKKMIPIMQKYAKDNGYSVILDVSNEQSTPV
                     LWAAPSTNVTKELVEAYNAENKTAAPAQPKPAATRPAAPPAKKP"
     gene            complement(8204..10996)
                     /gene="bamA"
                     /locus_tag="VE783_07020"
     CDS             complement(8204..10996)
                     /gene="bamA"
                     /locus_tag="VE783_07020"
                     /inference="COORDINATES: protein motif:HMM:TIGR03303.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamA"
                     /protein_id="HYX53185.1"
                     /translation="MGPAALVLGFILLFWLLPIAVSQQNGQIVQEISIEGNRRIPKDT
                     IMSHIYTKAGDIYDESSLERDLRAVWNTGYFDDVRIEREETPKGWVIHFYVREKPTIR
                     TIDYHGLSSVSQSDVLDRYKKVKVGLTVDSPYDPTKVIRAKVVLQQLLSEHGRQFANI
                     AVQVQQIPPSSVAVTFNVKEGPKIKVGNIRFEGNKHVSSRKLRAAMKNLKPLGVPNSI
                     FLENVFSRTFDATKLEEDAERVRDAMQHAGYFKAVVQDPKTNLRTINGGFHVPLIQKR
                     PAKVMDITMAVEEGSKYRLKAITFKNNNAIKNTALLRSLFPIKDGQTFDTHQIGKGIE
                     NLRKAYGEIGFINFSAAPSTEIDDDKKEITLNVDMEEGKAFFVRRIEFQGNTTTRDRV
                     IRRELLVQEGQVFNTRAWEVSVLRLNQLNYFEALKPEEDTERKLDEQNGTVDLIVKVK
                     EKGKNSIGLTGGVSGLEGSFIGLNYETNNFLGLGETLQVQANVGSLSRVLLFGFTEPY
                     VFDRPLQLGFTVFSRKYDFNQARQASIIAGQQINLPNSVLNQLLNYNQSSTGFSGTLR
                     YALGRSFKSVGLAYSLDNTTIETFSDASRNLFQTVNFRNISGPNALNGIITSSVTPSY
                     GYSTIDSPIRPHKGSSFFLSTEVAGLGGNVKFYRPVAAYTKWHPLYGQNTLGFRLQGS
                     FIGGWGGTEAPPYQRFYMGGESDLRGFDIRTVSPYVFVSTVQNVTLTNPDGSAVPVDP
                     TNPRRGSVQIPIPVNNITLPGGDTSLISNVEYRIKIVGPVVLAPFADFGMDFVTLPSQ
                     LKIAPDALTQLNNTVFGCPGIGTNFLCSGGTNLGFNGDLQPVPGTNYVPRLSTGLSLQ
                     VMLPIVQQPLQIYYAYNPLRLNTLVHSPSPINRSLFPPGAAGDFTFQSTISTFAPDFR
                     LQEPQRTFRFTISTTF"
     gene            complement(11242..13338)
                     /locus_tag="VE783_07025"
     CDS             complement(11242..13338)
                     /locus_tag="VE783_07025"
                     /inference="COORDINATES: protein motif:HMM:NF012602.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin oxidoreductase family protein"
                     /protein_id="HYX53186.1"
                     /translation="MKKTVRAACPHDCPDACGVLITVEDGRATRIQGDPAHPVTRGFL
                     CAKVTKYLDRVYAPDRVLYPMRRVAPKGQGKGDASDFVRISWDEALSQITAKFQQISS
                     EFGPEAILPYSYAGNMAILSFAGMAHRFFYRLGASQLNRTICSSAGGEAMSSVLGRRL
                     GTEPQDYVQSKYIIAWGANIHGNNIHLWPFIEEARRNGAKLVVIDPYKTRTAKAADWY
                     LPINPGTDVALALSMMHVIINEGLHDAEYTSKYTSGFGQLKQRVQEYPPEKVAGLTGI
                     SAPDIRKLALEYATQTPAVIRVNYGVQRSENGGLAVRAISMLPCIIGSWKHAGGGLSL
                     SMRGYFPLDNHSLEMPELMQKSPLGRAARVVNMSELGKALTTLSDPPVKAIFVYNSNP
                     AVVAPNYNDVIRGFLRPDLFTVVHEQFFTDTVNYADLLLPATTFFEHKDLLTSYGHAY
                     VQVSNPAIEPPGECKSNTDLFRELALRTGFDEPCFRQSVEEMIDVALAAEEGRLDPEG
                     LLSGITRERLETQGAVRVNFKGIRYAEGGFSTPSGKAELYSESLAKQGLDPIASFVPP
                     QESRHSDNSKSFPLEMLARKADNFLNSSFCNVGSVKKMERPELLEIHARDAEPRGIGE
                     GDWVRVFNGRGEVRLRAHVNGSVQPGVVAARLNWARLAPDGRSINALTSETLTDIGGG
                     PTFYSCLVEVEPADRK"
     gene            13405..13938
                     /locus_tag="VE783_07030"
     CDS             13405..13938
                     /locus_tag="VE783_07030"
                     /inference="COORDINATES: protein motif:HMM:NF025052.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HYX53187.1"
                     /translation="MRSSEESTLVVMSGLPGSGKSTLARALAAEVGGVVLDKDQIRAA
                     LFPPDLIEYSQRQDDFCMEVLLQTANYLIHQTTKRWVFVDGRPFTREEQLEHVRRVAE
                     EIDCRMKVILCQCSDEAARSRLQQPHIASNRGWELYHKLKAEFQLIEVPHLPVDTERP
                     MEESVADLLIFLRAPIT"
     gene            14114..16045
                     /gene="dnaK"
                     /locus_tag="VE783_07035"
     CDS             14114..16045
                     /gene="dnaK"
                     /locus_tag="VE783_07035"
                     /inference="COORDINATES: protein motif:HMM:NF001413.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone DnaK"
                     /protein_id="HYX53188.1"
                     /translation="MGKIIGIDLGTTNSVVAVMEGGEPKVIANDEGGRTTPSVVAFKA
                     GDRLVGQVARRQAITNPTNTIYSIKRFMGRRYDEVTDEMKMVPYKVVQQGDHVAVVAE
                     GKEYTPPQVSAMILQKLKKAAEDYLGQGVTEAVITVPAYFNDAQRQATKDAGKIAGLD
                     VKRIVNEPTAAALAYGLDKKKDETIAVYDFGGGTFDISILEVGEGVIEVKSTNGDTHL
                     GGDNIDQRIVEWLVDEFKKDEGLDLRSKGNEMALQRLRDAAEKAKIELSTTMETEINL
                     PFITADASGPKHLVKKLTRAKLEQMVEDIIQRSVGPCRAAMKDAGVETKDIDEVVLVG
                     GQTRMPRIQALVKELFGKEPHKGVNPDEVVAIGAAVQAGVLAGDVKDLLLLDVTPLTL
                     AIETLGGVATPMIPRNTTIPTRKTETFSTAADSQTSVEVHVLQGERPLARDNRTLGKF
                     HLTGIPPAPRGVPQIEVTFDIDANGILNVTAKDRATSKDQKITITSSSGLSKEEVERM
                     AKEADAHAAEDKAKREEIEARNQLDGFVYNVEKMLKEHGDKISGDDKSNVESALADAK
                     KALEGTDVAAMNSARERLTQASHKLAEVMYKSAQPEGGAPGAGPSAGGTSDGAAGGQQ
                     QKKDEGVIDAEYVDVEDKR"
     gene            16223..16390
                     /locus_tag="VE783_07040"
     CDS             16223..16390
                     /locus_tag="VE783_07040"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53189.1"
                     /translation="MRKFLVMKWVEGLNQVAGMIALPGLYTLDAAQDFLLQAASSEPD
                     AHYLIQEVGAA"
     gene            16505..17008
                     /locus_tag="VE783_07045"
     CDS             16505..17008
                     /locus_tag="VE783_07045"
                     /inference="COORDINATES: protein motif:HMM:NF024865.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HYX53190.1"
                     /translation="MRYKSRRGLKLFAVAALLPGMISAVPRVQAQDKPAAAVRMSAGD
                     KATAKQIEQLVRNFLQNVPKNDRKVFQDFFADDVIYTRSAGVTVNKAEILKNIGVRAT
                     NEPEATYDADDVTVHPYGNMAVINFRLIQHNGGQTNYFRNTGTFLKRNGKWQAVAWQA
                     TKAAETK"
     gene            17030..18256
                     /locus_tag="VE783_07050"
     CDS             17030..18256
                     /locus_tag="VE783_07050"
                     /inference="COORDINATES: protein motif:HMM:NF013705.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="J domain-containing protein"
                     /protein_id="HYX53191.1"
                     /translation="MATTQQKDYYGIMGVKKSASADDIRKAFRKLARKYHPDVNPGDK
                     KAEEKFKDISEANDVLSDPKKRKIYDQLGFYSDNIDPAAAEAYARGGGFGAGGFGSTP
                     GGGGRGGAQGFDFSGFDFSDFAGGGGRQAGGGAAAGGFRDIFSGIFGGAGRAGAAQRE
                     PERGSDLEYQVNIGFWDAIRGTVMKLNITRQEACSNCHGKGVVGAPGTCPECGGSGHV
                     TQNSGRMKFDMPCPRCGGTGKAQNVCPTCHGDGVVERTEPLEVRVKAGTRDGQRIRLA
                     HKGNTGLKGGAAGDLYIIIRIGDHPIFHREGDDIHVTVPVSAPEAALGARIEVPTIDG
                     RSQLRVPPGTQSGQKLRLREKGVPSATRDGHRGDQIVEIKIVVPEARDLKARELWQEL
                     QKLSPEDPRHDLWSKV"
     gene            18241..18759
                     /locus_tag="VE783_07055"
     CDS             18241..18759
                     /locus_tag="VE783_07055"
                     /inference="COORDINATES: protein motif:HMM:NF024698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HYX53192.1"
                     /translation="MEQSVVLTTERLILREFELADSEALMQVLGDPVAMQYYPAPFPR
                     REVDEWIWRNRARYRDSGFGIWAMALHGSGELIGDCGCFVRDLEGDYECEMGWHVRRD
                     LWNRGYATEAARHCIEYAFWKLGMPRIIAMVRPENLSSCRVAEKNGMNCDRAIFWRGY
                     DHCVYVKNRAEP"
     gene            18756..19157
                     /locus_tag="VE783_07060"
     CDS             18756..19157
                     /locus_tag="VE783_07060"
                     /inference="COORDINATES: protein motif:HMM:NF024979.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HYX53193.1"
                     /translation="MTAKRKSKGAYMISAVAEMYGIHPQTLRLYEREGLLKPSRTDGN
                     TRLYTEEDLQRLEFILNLARDLGVNIAGIAIILQMRERMEEMNRQMQDFVRFVQQEVA
                     FRASHAHPDASQGAIVPLRKPTISVPGRGRK"
     gene            complement(19280..19576)
                     /locus_tag="VE783_07065"
     CDS             complement(19280..19576)
                     /locus_tag="VE783_07065"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53194.1"
                     /translation="MRLTENVRNAEQRGRTAMRHGIERAREEWADAERRIRQRMRVYP
                     QRLKDLMVRSTPEVDTETAHLAPAAEQGDGIQRPIVSINGQDVPESELAKKRSA"
     gene            complement(19721..20500)
                     /locus_tag="VE783_07070"
     CDS             complement(19721..20500)
                     /locus_tag="VE783_07070"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HYX53195.1"
                     /translation="MNWTSRAMVDTGMVLRESALPARTAAPSQKIFLLEDDQDIARLV
                     RHHLETAGFRVRSYTTTTNVLPDAQKERPALMVLDIMVPGGDGLDLCRQIRQAGAPLS
                     ATPIVFLTAKTSETDRILGLELGADDYITKPFSPRELVARIKAVLRRCEAPLAPGSIK
                     AGDLDIDANAMTLTVRGQQVTTTATEFRLLHYLAQHAGRVFTRDQILDAVWRETTFVS
                     PRSVDVYVRKLREKIERDPENPRFLRTVRGTGYRFEMPKTE"
     gene            20809..>21098
                     /locus_tag="VE783_07075"
     CDS             20809..>21098
                     /locus_tag="VE783_07075"
                     /inference="COORDINATES: protein motif:HMM:NF025262.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-binding protein"
                     /protein_id="HYX53196.1"
                     /translation="MKNIYVGNLDFKLTEDELRQAFAAYGQVDNVTILKDRDTGSPRG
                     FGFVEMANDEEAEKAINGMNGAQLGARALNVNEARPKVSRGNGGGGFGGGRGG"
BASE COUNT         4483 a         5890 c         6255 g         4470 t
ORIGIN      
        1 ggccaggagt acgacgaaga gaacccgttt cagttcttca ccaattacgg cgaccccacg
       61 ctgcagaagg cagtgactga gggccggcgt agtgagttca aagatttcga tttccagaat
      121 gtgcctgatc cgcaggatcg aaccaccttt gagcgctcac gcctgaactg ggcagcggct
      181 gaaggcgaga acccgaagct gaagtggtat gcctcactgc tcgaactccg taacaagcac
      241 gtcacgaatg ctccccgcac ctgccgagct gaactcgttg acggcatcat tcgcatgcag
      301 atcccagccg aggattcgcg attgaaagcg ttcgcccgca tccgtggtca ggcacccttg
      361 cccgatctcg atggctggaa aaaagtgctg tgtgaagaag cggagcaata cgccgtcacg
      421 gtctgggaga agggctgaat ggtctagaag taccggaatg attaattgct ggctgttaca
      481 agcttctgcg cttccttgac gggcaaaaca cggggtttct tgttcttagc gcggtagatg
      541 gcgtactcgt tactgcactc cgccccagcc cagcctccat tgttcctcac gttataagcc
      601 tcagagagtt cgagcgatag aactgctact ccgagtgcag ggcgcgaaat cttgtacacc
      661 cggaacggag tgtaggtggt cacttctccg tttctgccgc tgatgtcttc cgagaggcag
      721 ggcacgccca ccagttcgcg gcttccatct tgatcaacat cgctgaattc tgtcagatcg
      781 aagagttcgt tgaaaatgac atcgggcttg ctgttcgctc taaacccaat cacgtgaagc
      841 ctctctgggt cgctggcata cgcccaactc cggaggaaaa gcaggggaga cagcgccgga
      901 tctcctgaat ccggcaaaat caaaacgtac ttggaacggg cgagattctc gcgcgacaaa
      961 ttcgcataca ccggtgaccg ctgctcctgg ctgttgtact cgatccagcc atcctcattg
     1021 ctgagactga actcgggctg ccctttcatc tgaagtcgga gtctggtgaa atcaccaggg
     1081 gcgtcgtagg gttcgggttt ctccaaaata aagtgcactg gcagaccctt ctgccacgag
     1141 taatcaaact cttccacgag cttccatttg gttccggacg ccgcatggac cggctgtcct
     1201 ttggcggcag caggcggttg ttgatgcttg caaccagcaa ggcaaatgag aagcaccgcg
     1261 aaaaccgcag cagtcccatg caagcggtgg cacttcactg cgcagtgtcc gatttcggcc
     1321 atcttcggca attctggtat tctggcaatt aggtctacct ggttccaacc tgtcccttca
     1381 ccgactcaat cagcttcttc gaatcccagc caatgccgtc cttgaagacc aattcggtgt
     1441 tctcgatgtc gctgatcttg gtggagggat cgccctttac gatcagaatg tcggcctgct
     1501 tgcccggagc caatgagcca atgtgctcag cttcgcccag gaactcggcg ccgttgagtg
     1561 tcgcgatctt gatcgcctcg gccggggtga agcccgcatc caccagcaat tcgacttcgc
     1621 ggatatcacc gtaccccgcg atgactccgc cgataccggt gggatcaagg cccgccatca
     1681 atgtgccccc agcttttacg aaagcgcgtt caaactccat ttccttctgg aacatggtgg
     1741 gccacggact gtctttgcgt tcgacaacgc gcttgcgatt ctcctgatat gccttaagcg
     1801 cctccgggct gaagagctgc tgtgcggcct gcggcacgtc gggccgcgag ggaacaaact
     1861 gttcgaacac tggaagcgtg gaagttacgg caacatggtg ctgcaccagc gtgttgatgg
     1921 ttttctggat ctccgggcca ttcacatcga gcttgttggc agcgataacc gcctgcgtcg
     1981 ggttcgggca gacatccggc ttcttgtccg gataaaactc tgtgtccacc gtaagcccgt
     2041 gttccaggtc gtcaatccca agctcggcgg cctcacggaa tccaacggaa cacagatgcc
     2101 cggtgacttt gatcccatgc ttgtgcgctt catcaatcgc agctttcagc tccgcgcggg
     2161 tgatgtagtt gtacgctttg aatgagcgaa cgccttcatc aacccagtaa gcgacggtgc
     2221 ggcgcgcgtc ttccggatct ttgatcgcgt gcatctgccg ggtgaatgca ccctcgcctt
     2281 ccaggtaagg accggtgaca ttcatcttcg gcccaatcag ctttccttcg tcgatcccct
     2341 ttttcaattc aagatcgaaa tacggctcaa tgctgccggt ggtgcgcatc gtcgtaacgc
     2401 cgagcgcgag atacagccgc gggaaggtga aaggcatgtc atggtagagc ccgcctgccg
     2461 cgggatagaa aagatggtca tgcatgccga ccagtcccgg cagtgcagtg tgccctgaaa
     2521 agtcgatatg ctttgcgtcc gcgggaacct gcactgagcc agccgctccg atggcagcaa
     2581 tctttccgcc ggagatcacg atcgtctgat cggcttttgc gggtgctcca gtgccgtcca
     2641 tcacgcgtac atgctcaagg gcgatcaccc gtgactgctc gcggatatag tccttgggtg
     2701 actcgggctg gcgctgtgcc cacgaggcgg cagcacaaca gatcacaaat agagcggcaa
     2761 gcaatcgacg gatcaactga ggcctccgaa ccaacgggaa ttcgcgaacc atagtaaatc
     2821 acgccgccac gggcggcgta gcggcgggca gaagagtagt atgtcgatgg ataatctgaa
     2881 cgaaggaggt actgccgatt ggctgcgaaa tcgacttcga tcccagttga cgcgcggctc
     2941 gcagataaag cagcgcgagt cctgggcgca agatctcgaa ctgaagcagt ccatacggct
     3001 cttcgagaga ttagcgcgtt gagcagcttc aaaatattga tgaccaagta tgcaagcaag
     3061 ctgcaccttc ggggccatgg ccagtgagtg gttttggatt gatagcttca ttgccaggcg
     3121 cttatcctcg ttagaccggc ggagaacaac ggagtgcata tcaatgcgga acgtgatccg
     3181 cgtcttgctc tttgctgctt ttcttttggt atttcctcga ccatgtcttg ccgcaaatcc
     3241 cgcctggtgc cgaacgtccg agttgtctct tcgtgccttg agggccggag cgtctgcagg
     3301 cactattgtc caaatgtttg ccatttcgaa tcgaggacga actagctgct ttcttggtgg
     3361 atttccatat atacaggcgc tcggctcaga taaaaagccg ctgccaaccc taacgtttca
     3421 ccgcatgacg accgcttttg cccgggagcc gcagcccgcc attcctgcgc ggttcctgct
     3481 ggaacccggg cgggagttgt ggtttgagct agtcttctcg gaccaagcgc cctatcgaga
     3541 cgaggtggaa gaccgatctt cttgccacac agttagcaag ctgtgggtcc tgccgcccca
     3601 caataaaaaa tctttgaccg caaattatgc ggggcaggtc tgcgatcaac ttcggtatac
     3661 gccgttattc ttaccaattc cgggctggtg atgcctgcgg tgaaggttcc aacgagggtc
     3721 tgttgcgcgc tgaatgttag aatgaagact aagcccatcg catggaccgc tctcacatcc
     3781 gcaattttgc catcatcgcc catattgatc atgggaagag cacgctctct gaccgtctgc
     3841 tggagctgac gggagcgctc tcccagcgcg agatgcaggc ccaggtgctg gacgccatgg
     3901 acctggagcg ggaacgcgga atcaccatta aggcccatgc cgtccgcatg aaatatgtcg
     3961 cgcagaacgg ggaagagtac cagctcaacc tgattgatac gccggggcac gtggattttt
     4021 cctacgaggt ttcacgctcg ctggcctcat gcgagggcgc tctgctcgtg gtggacgcct
     4081 cccagggcgt cgaagcccag acgctcgcga acgcttacct ggccatcaat cacgggctgg
     4141 agatcatccc ggtcatcaac aagattgatc tgcccagcgc tgacatcccg cgcgtgaaag
     4201 aaatgatcga gcagaccgtg gggctcgata ccaaagatgc catgctggtc agcgccaaga
     4261 gtgggcaggg cgtgccggaa ttgctggagg cgatcgtcaa gcgcctgcca ccgccgaaag
     4321 gcaaccccga acacgcgttg caggcgctca tcttcgattc ctggtttgat ccctaccgcg
     4381 gtgtgattgt gctgacccgg ctttttgaag gcacgctgcg caaaggcatg aaagtccgtt
     4441 tgtggtggaa cggtaaagtg ctggacgtgg aaaccctggg tgtgctcacc cccaagccgg
     4501 tggagattga cgagctggtg gccggcgaag tcggtttcat gatcgccaac aacaagaccg
     4561 tttctgatac caaaatcggt gacaccatca ccgatgatgc tcgtccggcg attgagccgc
     4621 tcccggggtt tgaagaactt aagccgatgg tgtttgccgg tctctatacc gtagacgcgc
     4681 acgagcacac ggcacttcgc gaagcgctgg aaaagctccg cctgaacgac tcatctttct
     4741 tcttcgagcc ggaaagctcg gctgcgcttg ggtttggttt ccgttgcggc tttctcggac
     4801 tgctccacat ggagatcatc caggagcgcc tggaacgtga gttcgggctg gacttgatca
     4861 ccactgcgcc aggcgtgcgt tacaccatca ccaaaactga tggtgaaaaa gttgaggtgg
     4921 ataatccctc acgctggccg gaccagagcg agatcgccaa aattgaggag ccggtcatac
     4981 tggccacgat tctcaccaat gaagaatatg tggggggcat cctcaagctg gtggaagaga
     5041 aacgcggcag gcagaaggct tttgagtatg tgagcgcctc gcgcgtgatg ctctcctatg
     5101 agctgccgtt gaacgaaatc gtgctcgatt tttatgaccg gcttaagacc gtctcccgcg
     5161 gctacgcttc gctggactac catctggccg gcgcatggga atcgcccatg gtcaaactcg
     5221 acattctggt tgccggcgat ccggtggatg cgctttccat catcgtgcat cgcgacttcg
     5281 cttacgagcg cgggcgcgct ctggtctcca agatgcggga actgattccc cggcagatgt
     5341 ttgaggtgcc cattcaagcg tccataggcg ctaaaatcat cgcccgcgaa accgtccatg
     5401 ccatccgtaa gaacgtcctt gccaagtgtt acggcggtga cattacccga aaacgcaaac
     5461 tcctggagaa gcagaaagag ggcaaaaagc ggatgaagcg gatcggaaag gtcgatattc
     5521 cgcaggaagc ctttctggct gtgcttaagg tgggcgaggg cgcgtgatgc agcagaaaac
     5581 aaaaggttgc tgcttcaaat tgtgcaaatc ctttgtttcc agagccctac tttcaacctt
     5641 tctggtgcaa tctgcttcag ttgcgctctg ggatttttaa gttccctgaa atcatcaatt
     5701 tacaatcgat ctgcccacta tttccgtgca ctgactaacc cgctattaac gagtcattaa
     5761 cactgccccg attgagaatt gcacagaaat ttccacagct ctgcggcccg cttttgcgag
     5821 ccgcttggtt ctgcaggact acgctaatca cctgagcgcc tgaaatttac cgtgatggtg
     5881 gtctccacct ccacgggctg tccgttgagc agaaagggcc ggtagcgcca ttgcttcacc
     5941 gcttctaccg cagcggcggc caacagagga agcccgctct ctacggcaag gttttggatc
     6001 gatccatctc gtccgatgat ggcatgcagt ttcacctcgc cctgttgacg agtcatgatg
     6061 gcgatccggg ggtatgcagg ttctacgcga tggatcagct gaccttcaga gatcgtggag
     6121 tatcgcatgc gtttgattgg ctctgtagaa actgaagagc agtgatcgca gccgccgtcc
     6181 aggttaggca tatcgctggc agatttcgat cccttcggca cggaaacaat ttcaccggtc
     6241 tttgtggcgt ctggccttgg atgtccgatg gtgagcatcg gatgcgtgtt cacaatcgtg
     6301 acaacattgc tcgccggcat tgttggccca tggttgccag aatgatctgg ttgatggcgg
     6361 acctcaggct cagtacttac gtccatcaaa ggactgtaaa ttggcgcgtg cgcggagacc
     6421 ggaatcacgc cgcttgatag cagtggtatc gccaccattg cagctcccac caggacctca
     6481 agtgtgaagg ccagcagaac cggccagcgt ttgcgagtag tgagagaatt ttccagaaga
     6541 ctgtcacgga acattttgcg attctccttc gggtgtatca attgacaccg caaagtcacg
     6601 cggatgttcc gcctgaattg aagttaagga aaaaataaag cggccgtccc gcaggacggc
     6661 cgagtggaaa cgaggaacct ttacggcttt ttcggtgtcg aggttgcgcc cggagcggcg
     6721 ggccgattcg cggcgcctgc agcaggcttc ggcgcaggag ctgacgcgga cgtgggaggc
     6781 ggcgtggccg ggttatctac gttataagca tccaccagtt ccttggtaat gatgttgctc
     6841 tgggccgccc acagtactgg agtttgtggg ttcgatacat ccaggatcac cgcgtagccg
     6901 ttggtcttgg catatttttc cagggtgttg agcatcttcg agccgatgcg gttcaccacc
     6961 tcctgctgcg cctgctggaa ttctgcctgt gcgtcttcat aattccgctg cagtgacttc
     7021 tgcttggtct caatcgcctt ggcacggctg ttgcgctcgt cgtcgctcag cttgtcactc
     7081 tgcgcctgaa actgcttctt caaaccgtcg agttcatcat tggcgttctt cagttcagcc
     7141 tgcttcggcg tgaagcgctt ctccagcgaa tcaaattcct ttttgccttc attggtggcc
     7201 aggatggcgt cctgcacatt caccacgcca atcttcgtgg ccggtggtcc ggcgggtgcg
     7261 cttgctgcgg ccggggcagc ggctccctgg gccaaagctg cgatactcat caggctgctc
     7321 agcccgaggc tgaggacgaa ttttcttaag gttgacgtac catgcatggg ttcaggttac
     7381 tccttgtttc ttgttccaca gcttttctgg cgctgctgcc gatctctcac aaacttttta
     7441 aggcttcttg gctggcggag cagccgggcg cgttgctgcc ggtttcggct gcgccggagc
     7501 ggcggtcttg ttctccgcgt tataggcttc caccaattcc ttggtcacgt tcgtgctcgg
     7561 agcggcccag agaaccgggg ttgactgctc attggacacg tcgagaatca cgctgtaacc
     7621 attgtccttg gcatatttct gcatgatcgg gatcatcttt ttggccaggc ggtttagcac
     7681 ttcgttttcc gcctgctgca cttcagtccc gtaatcctca tagctccgtt gaaaggtctt
     7741 ctgccgggtc tgcagggtgg caactcggct gttgcgttcg gactcgctca gcttgtctcc
     7801 ctgagtctgc agttcctgct tcatcttttc aatggcatcg ttctctgccc tgagctgcga
     7861 ctggcgggaa gcaaagcgct gctctacggc ctcggcttct tttttccctt cgttggtgct
     7921 gatgatggct gcctgaatat tggcgatgcc gaccttctgc ggtccggtgg cggcctgctg
     7981 ggcagagccg agcgcggccg tgcccatgaa aagcaggcac gcagaaacag cgctggtcaa
     8041 cttgaacgac ataaaactta tgggctcctt agctggtaat ggcaactggc tcgtcgcgag
     8101 gctatttcaa tccaccgcgt atcgcgtgcg tgaaagcagc ttgaagggac gattgctgaa
     8161 aattataggt gctgcccttc acagcgtcaa accagtattc ctcctagaaa gtggtgctga
     8221 tcgtgaaccg gaacgtgcgc tgcggctcct gcagccggaa gtcaggagca aaggtgctga
     8281 tggtcgactg gaacgtgaaa tcccccgctg ctcccggcgg gaacaggctg cggttgattg
     8341 ggcttggcga atgcaccagc gtgttcaggc gaagcggatt gtaagcgtag taaatctgca
     8401 gcggctgctg cacgatcggc aacatgacct gcaatgaaag ccccgtcgag aggcgcggca
     8461 cgtagttcgt tccgggcacg ggctgcagat caccattgaa ccccaggttg gtgccgccgg
     8521 aacagaggaa gttcgtcccg attccggggc agccgaagac cgtgttgttg agctgggtga
     8581 gcgcgtccgg agcgatctta agctgcgaag gcagggtcac gaaatccatg ccgaaatcgg
     8641 cgaatggcgc cagcaccacg ggccccacaa tcttgatgcg gtactccacg ttgctgatca
     8701 gcgatgtgtc accgcccgga agggtgatgt tgttcaccgg gatcggaatc tgcacgctgc
     8761 cgcgacgggg attcgtgggg tccacaggga cggcgctgcc gtcagggttc gtcaatgtca
     8821 cgttctggac tgtactcaca aagacatagg gtgaaactgt gcgtatgtcg aagccgcgca
     8881 gatcgctttc accacccata tagaaccgct ggtatggcgg ggcttctgtg ccaccccagc
     8941 caccgataaa gcttccctgc agccggaacc cgagtgtgtt ctggccatag agcggatgcc
     9001 attttgtgta ggctgcaacc gggcggtaga acttcacgtt cccgccgagc ccagctactt
     9061 ccgtggaaag gaagaagctg gagcccttgt gcggccggat cgggctgtca atggtgctgt
     9121 aaccgtacga tggcgttacg gaactcgtga taatcccatt cagcgcgttg ggcccggaga
     9181 tgttgcggaa attgaccgtc tggaacaggt tgcgtgaagc atcgctgaaa gtctcaatcg
     9241 tggtgttgtc caacgagtag gcgagcccca cacttttgaa ggaacggccg agcgcataac
     9301 ggagcgtgcc gctgaacccg gtgctggact ggttatagtt cagcaactga ttgagcacgg
     9361 agttcggaag attgatctgc tggccggcaa tgatggaagc ctggcgtgcc tggttgaagt
     9421 cgtatttgcg gctgaacacc gtgaacccga gttgcagagg acgatcaaac acgtacggtt
     9481 cggtgaatcc gaacagcagc acgcgcgaaa ggctgcccac gttcgcctgc acctgcaggg
     9541 tttcacccag ccccaggaaa ttgttggtct cgtagttcag gccgataaac gaaccttcaa
     9601 ggccgctcac gccgccggtg aggccaatgc tgttcttgcc tttctccttg accttcacga
     9661 tcaggtcgac tgttccgttc tgctcgtcca gcttgcgctc tgtatcttct tccggcttca
     9721 gcgcctcaaa gtagttgagc tggttcaggc gcagaacgct tacttcccac gcgcgggtgt
     9781 tgaatacctg gccttcctgc accagcagtt cgcgacggat gacgcgatcg cgcgtggttg
     9841 tgttgccctg aaactcaatg cgacgtacaa agaaggcttt gccttcttcc atgtcgacat
     9901 tcagcgtgat ttccttctta tcatcatcga tctcagtgct gggcgcggcg gaaaaattga
     9961 taaacccgat ctcaccgtaa gccttacgca ggttctcaat gcccttgcct atctggtgag
    10021 tgtcgaatgt ctggccgtct ttgatgggga acaggctgcg cagcaacgca gtgtttttga
    10081 tggcgttgtt atttttaaag gtgattgcct tcagccggta cttggagcct tcctccaccg
    10141 ccatggtaat gtccatgact ttggcagggc gcttctgaat aagcggaacg tggaagccgc
    10201 cattgatggt gcgcaggttg gtcttggggt cctgcaccac agccttgaag tacccggcgt
    10261 gctgcatggc gtcacgtacg cgctcggcgt cttcttccag cttggtggcg tcaaaggtgc
    10321 gcgagaagac gttttccagg aaaattgaat tcggcacgcc cagcggcttc aggttcttca
    10381 tggccgcgcg cagcttgcgg ctggaaacat gcttattgcc ctcaaacctg atgttaccca
    10441 ccttgatctt ggggccttct ttcacgttga aggtcaccgc tactgaagat ggtggaatct
    10501 gctggacctg tactgcaatg tttgcgaact gccgaccgtg ctcagagaga agctgctgca
    10561 gcaccacttt ggccctgatc accttggttg gatcgtatgg gctgtccacc gtcagtccga
    10621 ccttaacttt cttgtaacga tccaacacgt cactctgtga gacagaactc aagccgtgat
    10681 agtcgatggt ccggatggtc ggcttttccc ggacgtagaa gtggatgacc caccctttgg
    10741 gagtttcttc gcgctcgatg cgcacatcgt caaagtagcc ggtattccag acggcccgga
    10801 ggtcacgctc caggctgctc tcgtcgtaaa tgtcgcccgc cttggtgtaa atgtgcgaca
    10861 tgatggtgtc tttaggaatc cgtcggttcc cttcgataga gatctcctgg actatttggc
    10921 cgttctgctg ggacacagct atcgggagta gccaaaagag aagaatgaac ccgaggacca
    10981 gcgcggcagg tcccatccgc cggacagaac tccgactggt atccgtaaag agcacgtaga
    11041 tatgactacc ctcagaacaa gttgggaaaa acccagatta tacgggagtt agcgcattcg
    11101 cgccaccaac tctcgcggct taagacaaat cacctgctca tccggcccgg cataaacccg
    11161 agtccggctg accgctggca aggcggtcca atacgtgtat caggaacgcg cgccagagag
    11221 gaacttgcag aaaaatttcc gctatttgcg gtcggcgggc tccacctcaa ccaggcagga
    11281 atagaatgtc gggccgccgc cgatgtcggt caaagtctct gatgttagcg cgttgatgct
    11341 gcggccgtca ggagcgagcc gggcccagtt cagccgcgcc gccaccactc ccggctgcac
    11401 agacccgttt acgtgggccc gcagccgcac ctcgccgcgg ccattgaaga ccctcaccca
    11461 atcgccttcg ccgatgccgc gaggttcagc gtcgcgggca tggatttcga gcaactccgg
    11521 cctttccatc tttttcactg aaccgacgtt gcaaaagctg gagttcagga agttatccgc
    11581 cttgcgcgcc agcatctcca acggaaacga ctttgaatta tcactatggc gcgactcctg
    11641 cggcggcaca aacgatgcaa tagggtccag cccctgcttc gcaagcgact cgctgtaaag
    11701 ctccgccttt ccgctgggcg tggagaagcc cccttctgca tagcggatgc ccttgaaatt
    11761 cactcgcacg gcgccttggg tttccagccg ctcgcgtgtg atgccgctga gcaggccttc
    11821 aggatctagc ctgccctcct cggccgcgag cgctacatca atcatctcct caacgctctg
    11881 gcggaagcag ggttcgtcaa agcccgtgcg cagcgctaat tcgcggaaca ggtcagtgtt
    11941 tgacttgcac tcgcctggcg gctcgatcgc tgggttggac acctgcacat aagcatgacc
    12001 gtaagaggtg agcaggtctt tgtgctcgaa gaaagtcgtg gcggggagca gcaggtccgc
    12061 atagttcacc gtgtcagtaa agaactgctc atggaccacg gtgaacagat ccggccgcag
    12121 gaagccgcga atcacatcat tatagttcgg cgcaactact gctggattcg agttgtagac
    12181 gaagattgcc ttcaccggcg ggtcgctcag cgtggtaagc gcttttccca gttctgacat
    12241 gttgactacg cgcgccgcac ggcccagcgg gctcttctgc atgagttccg gcatttccag
    12301 gctgtggtta tcgagcggga aatatccgcg catggagaga gagagccctc cgccggcgtg
    12361 cttccatgac ccgatgatgc agggcagcat ggagatggcg cgaacggcca agcctccgtt
    12421 ttccgagcgc tgcacgccgt agttcacgcg aatcacagcc ggtgtttgcg tggcgtactc
    12481 aagggcgagc ttgcgaatgt ccggcgcgga gatgccggtc aacccggcaa ctttctccgg
    12541 cggatattcc tgaacgcgct gcttcagttg tccaaagcca gaggtgtact tgctggtgta
    12601 ctcggcgtca tgcagccctt cattaatgat cacgtgcatc atcgagaggg ccagcgccac
    12661 gtcagttccc ggattgatgg gcaggtacca atcggcggct ttcgcggtgc gggtcttgta
    12721 gggatcgatt accaccagct tggcgccgtt ccgccgcgct tcttcaatga agggccaaag
    12781 atggatgttg ttgccgtgga tgttcgcgcc ccaggcaatg atgtacttcg actgcacgta
    12841 atcctgcggc tcggttccca agcggcgtcc cagaactgag ctcatggcct caccgcccgc
    12901 ggaagagcag atggtgcgat tcagttgcga cgctcccagc cggtaaaaga atcggtgcgc
    12961 catgccggcg aagctcagga ttgccatgtt tccggcatac gagtaaggca gaatggcttc
    13021 cgggccgaac tcgctggaaa tctgttgaaa ttttgccgtg atctggctca gcgcttcgtc
    13081 ccagctaatg cggacgaaat cggaggcgtc gcctttgccc tggcctttcg gggcgactcg
    13141 acgcatggga tagagcacgc ggtccggcgc atacacgcgg tcaagatact tggtgacttt
    13201 cgcgcagaga aagccgcggg tcaccggatg agcgggatcg ccctggatgc gcgtggcgcg
    13261 tccatcttcc acggtgatca gcactccgca ggcatcgggg caatcatgcg ggcaggcggc
    13321 gcgaaccgtc ttcttcataa gcattcatta taggcccgca gagatggccc catctcaccg
    13381 atggcttttg ctacgttggt ggagatgcgt tcttcagaag agagcacgtt ggtcgtgatg
    13441 agcggactgc ccggaagcgg aaaaagcact ctcgcccgag ccttggctgc cgaagtcgga
    13501 ggcgtggtgc tggacaaaga ccagatccgc gccgccctgt ttccgccgga cttgatcgaa
    13561 tactcgcagc gccaggatga cttctgcatg gaagtgctgc tccagaccgc gaattacctc
    13621 atccatcaga cgactaagag atgggtgttt gtggatggcc ggcccttcac acgggaagag
    13681 caactggaac acgtgcgacg ggtggcagaa gagatcgact gccgaatgaa ggtcatcctg
    13741 tgccagtgtt ccgatgaggc ggcccgcagc cggcttcagc agcctcacat cgcctcgaac
    13801 cgcggttggg agctttacca caagctaaag gctgaattcc aactgatcga agtgccgcat
    13861 ctaccagtcg atacggagag gccgatggaa gaatcagtcg ctgatctctt gatattcctc
    13921 cgcgcgccaa ttacctgatt cgccacgccc cgcttgcgtc ttcctttgtg catcttcctt
    13981 tctgcaacgt tcaccctatc cggctcatct aacagattga caataagtca ctcaactctg
    14041 ataatgaggt tgttgtcacg gctggtacac tgattataaa gcacttatag gtttaatggg
    14101 aggctttaaa gccatgggaa agattattgg aatcgatttg gggaccacca actccgtggt
    14161 tgccgtgatg gaaggcggcg aacccaaggt gatcgccaac gacgaaggcg ggcgcaccac
    14221 tccttctgtg gtcgcattca aagccggaga tcgcctggta gggcaggtag cccggcgtca
    14281 ggccatcacg aatccgacga acaccattta ttcgatcaag cggttcatgg gacgccgtta
    14341 tgacgaagtc accgacgaaa tgaagatggt cccatataag gtcgtccagc agggcgatca
    14401 cgtggccgtg gtggcggaag gcaaagaata caccccgccg caggtttcgg ccatgattct
    14461 gcagaagctg aagaaggccg cagaagatta tctgggtcag ggcgtgaccg aagcggtcat
    14521 caccgtgcct gcatacttca atgacgcgca gcgccaggcg actaaagacg ccggcaagat
    14581 cgcaggcctc gacgtgaagc gcattgtcaa cgaaccgacc gccgcagccc tcgcttacgg
    14641 gttggacaag aagaaggacg aaaccatcgc cgtttacgac ttcggcggcg gaaccttcga
    14701 tatttcgatt cttgaggtcg gcgaaggcgt gattgaggtg aagtcgacca acggtgacac
    14761 gcaccttggc ggcgacaaca ttgatcagcg catcgtggaa tggctggttg acgagttcaa
    14821 gaaagatgaa gggctcgacc tgcgcagcaa gggcaatgag atggccctgc agcgtctgcg
    14881 tgacgcggca gagaaggcca agatcgagct ctccactacc atggagaccg agatcaatct
    14941 gccgttcatc acggccgatg cgtccgggcc caagcacctg gtgaagaagc tcacgcgcgc
    15001 caagctggaa cagatggtgg aagacatcat ccagcgctcc gtgggtccgt gccgcgccgc
    15061 catgaaagac gccggcgttg agaccaagga cattgacgaa gtggtgctgg tcggcggaca
    15121 gacccgcatg ccgcgtattc aggccctggt aaaagaactg ttcggcaaag agccgcacaa
    15181 gggcgtgaac ccggatgaag tagtggcaat cggcgccgcg gttcaggcgg gcgtgctggc
    15241 gggagacgtg aaagacctgc tcctgctcga cgtgacgccc ctgacgctcg ccatcgaaac
    15301 gctgggcggc gtggcaacgc cgatgatccc gcgcaacacc acgattccga cgcgtaagac
    15361 ggagaccttc tccacggcgg cggacagcca gacttcagtg gaagtccatg tgctgcaggg
    15421 tgagcgtccg ctggcacgcg acaatcgaac tctcggcaag ttccacctga ccggcattcc
    15481 gccggctccg cgtggcgttc cgcagatcga agttacgttt gacatcgatg ccaacggaat
    15541 cctgaacgtg accgcaaagg accgggccac gagcaaggac cagaagatca cgattacatc
    15601 ttcttcaggc ctcagcaagg aagaagtgga acgcatggcc aaagaagccg acgcgcacgc
    15661 ggcggaagac aaggccaagc gggaagagat cgaggcgcgg aaccagctcg acggcttcgt
    15721 gtacaacgta gaaaagatgc tgaaagagca tggcgacaag atctccggcg atgacaagag
    15781 caacgtggaa tccgccctgg ccgatgccaa gaaagcgctg gaaggcactg acgtggcggc
    15841 gatgaattca gcccgcgaac gcctgactca ggcttcgcac aagctggccg aggtcatgta
    15901 caagtcggcg cagccggaag gcggcgctcc cggagccgga ccttcggcgg gcggtaccag
    15961 tgatggcgca gcaggcggac agcagcagaa gaaagatgaa ggcgtgatcg acgccgagta
    16021 cgtggacgtg gaagacaaga ggtaaccgcg tttcagcgat aaaaggcaaa aggccagcaa
    16081 ggccgggtgg aatgtgcggt tgggttccgc gagaagttaa gaaccgtcag gtgaaacaac
    16141 cgcgattcct gccgcgggtt attaccagat gaagggcggc ggtgaagccg cctttctctt
    16201 ctagggcaat gaggtgacca aggtgagaaa atttctggtg atgaaatggg tcgaaggcct
    16261 gaaccaggta gccggcatga tcgcgctgcc gggactctac acgctggatg ccgctcagga
    16321 ttttttgctg caggcagcgt cctccgagcc agatgcacat tacttgattc aggaagtcgg
    16381 tgccgcgtaa gtgcgagatt caaccacaaa gacacaaagg agcacgatgc tcaagctctt
    16441 tctgttcctt cgtatccttt gtggtaagtc ctgtgtggta agtcctgatg ttccggagag
    16501 aagagtgaga tacaaatccc gtcggggtct caaactgttt gccgtggcag cgctgctgcc
    16561 cggcatgatt tccgccgtgc cacgcgtaca ggcacaggac aaacctgctg ccgcggtcag
    16621 gatgtcagcg ggagataagg ccacagccaa gcagatcgaa cagctggttc gcaactttct
    16681 ccagaatgtg ccaaagaacg atcggaaagt attccaggac ttctttgcgg atgacgtgat
    16741 ctacacccgc tccgccggcg taactgtgaa caaggcggag atcctgaaga acatcggggt
    16801 acgtgccaca aacgagccgg aagcgaccta cgatgctgac gatgtgaccg tgcatcctta
    16861 cggaaacatg gcagtgatca acttccggtt gattcagcac aacgggggcc aaacgaacta
    16921 cttccgcaac acaggaacgt ttctcaagcg caacggcaag tggcaagcgg ttgcctggca
    16981 ggcgactaag gccgccgaga caaagtaagc gattagcagg tcaggataaa tggcgacaac
    17041 acaacaaaag gactattacg gaattatggg cgtaaagaag agcgcctccg cggacgacat
    17101 ccgcaaagcg ttccgcaagc tcgccagaaa gtaccatcct gacgtaaatc ccggggacaa
    17161 gaaggcggaa gaaaaattca aagacatttc ggaagccaat gacgttctga gcgatccgaa
    17221 aaagcgcaag atttatgacc agctcggctt ttactctgac aacatagatc cggcagctgc
    17281 agaggcttat gcccgtgggg gcggctttgg ggcgggtggg tttggctcaa ccccaggcgg
    17341 tggcggtcgc ggcggggccc agggcttcga cttcagcggc ttcgactttt ccgattttgc
    17401 cggcgggggc ggacggcagg cgggtggcgg tgcggccgcc ggcggctttc gggatatttt
    17461 ttccggcatc tttggcggag caggtcgcgc gggtgcggcg cagcgcgagc ccgaacgcgg
    17521 cagcgatctt gaatatcagg tgaacatcgg cttctgggac gccatccgcg ggacggtaat
    17581 gaagctgaac attacccggc aggaggcttg cagcaactgc catggcaagg gagtggtggg
    17641 cgcgccggga acgtgcccgg agtgcggcgg cagcggccac gtgacgcaga atagcggacg
    17701 catgaaattc gacatgcctt gcccgcgctg cggcggcacc ggaaaggcgc agaacgtctg
    17761 tcccacgtgc cacggtgacg gggtagtcga gcgcaccgag ccgctcgaag tccgggttaa
    17821 agccggaacc cgcgacgggc agcgcatccg cctggcacat aaggggaaca caggtctgaa
    17881 gggcggcgcg gcgggtgatc tctatatcat catccgcatc ggcgaccatc cgatctttca
    17941 ccgcgaaggt gatgacatcc acgttaccgt cccggtctcc gcgccggagg cagccctcgg
    18001 cgcgcgcatt gaagttccta cgattgatgg tcgctcgcag ctccgcgtgc cgcccgggac
    18061 ccagagcggg cagaagctgc gcctgcgtga gaagggtgtg ccatcggcga cgcgcgacgg
    18121 tcatcgcggt gatcagattg tggagatcaa gatcgttgtg ccggaggcgc gcgatttgaa
    18181 ggcccgcgag ttgtggcagg aattgcagaa attgagcccc gaagacccga ggcacgattt
    18241 gtggagcaaa gtgtagtcct tacaaccgag cggcttatcc tccgcgagtt tgagctggcg
    18301 gactctgagg ccctgatgca ggtactcgga gatccggtag caatgcagta ttacccggcg
    18361 ccatttcccc ggcgagaggt ggatgagtgg atatggcgaa acagggcacg ctaccgcgac
    18421 tccggcttcg gaatctgggc gatggcactt cacggttcgg gagagctgat tggcgactgc
    18481 gggtgtttcg ttcgggacct cgaaggcgat tatgaatgtg agatgggatg gcatgttcgg
    18541 cgcgacctct ggaaccgagg gtacgcaacg gaggcagcgc gtcattgtat cgaatatgcg
    18601 ttctggaaac tgggaatgcc gcgaatcatt gcgatggtgc gtccggaaaa cctgagctca
    18661 tgcagggtgg cagaaaagaa cggaatgaac tgcgatcggg ccattttctg gcgcgggtat
    18721 gatcattgcg tgtacgtgaa gaacagagct gaaccatgac ggccaaacga aaatccaaag
    18781 gcgcatacat gatttccgcg gtggcggaaa tgtacggcat ccacccgcag acgttgcggc
    18841 tttatgagcg cgaaggattg ctcaagccct ctcgcacgga cggcaacacg cgcctatata
    18901 cggaagagga cctgcagcgg ctggagttca ttctgaacct cgcgcgcgat ctcggagtga
    18961 acatcgccgg aatcgcaatc atcctgcaaa tgcgagaacg gatggaagag atgaaccgcc
    19021 agatgcagga ttttgtgcgc tttgtgcagc aggaagtggc cttccgcgcc agccatgccc
    19081 acccggacgc gagtcagggc gcaatagttc ctctgcgtaa accgaccatt agtgtgcccg
    19141 gccgcggacg caagtaaccg ccgggtacac gcattgagtg cgcacccgac ggcgaaattc
    19201 ttttaaaact ttaaaagtga gtagctgctg cggggcgacg cgaggtcgcc ctcctcacag
    19261 caaagttcgc aaatacggtt caggcagagc gcttcttcgc caattcagat tcaggaacgt
    19321 cctgtccgtt gatagaaaca atcggccgct ggatcccgtc gccctgttcg gctgccggtg
    19381 caaggtgagc tgtttcggtg tccacctcag gcgtggagcg aaccatcaga tccttgagcc
    19441 gttgtggata gacccgcata cgctggcgaa tccttcgttc agcatcggcc cactcctcgc
    19501 gagcccgttc tattccgtgc cgcattgcgg tgcggcctcg ctgttcagca ttccgtacat
    19561 tttccgtgag acgcatagat cctccccagg ccagcgccag cttgatttct gctttagtgc
    19621 tttatgggat gcgggttgca tgaaatggga aactgctgac cggctgctca cgccagcagc
    19681 tctggcgggc tgcaactcag gattctgtga agctggccag ctactcggtt ttcggcattt
    19741 caaaacgata accggtgccc cggacagtcc gcaaaaaccg cgggttctcc ggatcgcgct
    19801 ctatcttctc gcgaagtttt cggacgtaaa cgtcgaccga ccgtgggctc acaaacgtag
    19861 tctcgcgcca gactgcatcc aggatctggt cgcgggtgaa gacgcggcca gcgtgctggg
    19921 ccaggtagtg cagcaggcgg aactcggttg cggtggtggt cacctgctgc ccgcgaaccg
    19981 tgagcgtcat ggcgttagcg tcaatatcaa gatcgcccgc cttgattgag ccgggggcga
    20041 gcggcgcctc gcagcggcgc aaaactgcct tgatgcgtgc caccagttcg cgcgggctga
    20101 atggcttggt aatgtaatcg tccgctccca gttccaggcc gagaatgcgg tcggtttctg
    20161 aagttttcgc tgtgagaaag acaatcggcg tggctgaaag cggcgcgcct gcctggcgaa
    20221 tttgccggca cagatccagg ccatcaccgc ctggcaccat gatgtcgagc accatgagtg
    20281 cgggcctctc tttttgcgcg tcgggaagca cgttggtcgt ggtcgtatag ctccgcacac
    20341 gaaaacccgc ggtctccagg tggtggcgca caagccgcgc tatgtcctga tcatcttcaa
    20401 gaaggaaaat tttctgcgaa ggcgcagccg tgcgcgcagg caaagcggat tctcgaagca
    20461 ccattcctgt atccaccatg gctcgactcg tccaattcat ctacgcggca gagagtacac
    20521 agccgatgtt aaaggagtat gaaacttgag cattggcagc aggaatcaac ccttcaattc
    20581 gctctgtttt cgattttcac cgcggccggg gaaacaccgg cacgcactgg gtattagccg
    20641 tccccgagca gaaaaaatat gtcgtacggt tgccaactta cccagaccgg gcgtaggctt
    20701 gtggggtctg cgcggcgcgc gccgacccct ggttttcgga ccgcttagtc tcttaccttc
    20761 caacctgcag tcacgcctga tcgcgcgcct gtactcgaaa ggatcgccat gaagaacatc
    20821 tacgtaggga acctggattt caagttgacg gaagacgaat tacgccaggc gtttgcagca
    20881 tatggccagg tggataatgt gaccattctg aaggaccgtg ataccgggtc cccgcgcggc
    20941 ttcgggttcg tggaaatggc caatgatgaa gaggcggaaa aagccatcaa cggcatgaat
    21001 ggagcgcaac tgggcgctcg tgccctgaac gtaaatgagg cgcgccccaa ggtgagccgc
    21061 ggcaacggcg gtggtggctt tggcggaggc cgcggtgg
//
LOCUS       DASQYP010000219         2557 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_283399, whole genome shotgun sequence.
ACCESSION   DASQYP010000219 DASQYP010000000
VERSION     DASQYP010000219.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 2557)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2557)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2557
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_283399"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            242..718
                     /locus_tag="VE783_07080"
     CDS             242..718
                     /locus_tag="VE783_07080"
                     /inference="COORDINATES: protein motif:HMM:NF024900.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2Fe-2S iron-sulfur cluster-binding protein"
                     /protein_id="HYX53197.1"
                     /translation="MRGVQSSSPSLLKGSDDVGKRLRHGRSRFDFAASWILTAGNQQG
                     VRYYFCMSNPGHLYRPYEKLVSITIGEKQFQVPEGNMLLRAMQFLAQEDVSYGRFCWN
                     EECQYCRVAYDLGPGTPLRTALSCKLMVAEGMRVSEAAQEIRYCLRKLETNLKVKV"
     gene            complement(720..1619)
                     /gene="ybgF"
                     /locus_tag="VE783_07085"
     CDS             complement(720..1619)
                     /gene="ybgF"
                     /locus_tag="VE783_07085"
                     /inference="COORDINATES: protein motif:HMM:NF024915.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tol-pal system protein YbgF"
                     /protein_id="HYX53198.1"
                     /translation="MKNKSLLLLATVLLAACTVQPARAADTKSQLIQIQTQLQLLQDN
                     MAKMQQSFDERMGVMREMITQQTDNVNKMGSAVQNLQKSLGAQTNDEASKVDQISGQV
                     QALHDAVDELKARLAKVSKQLDDMQAAQQNIPQAAPGTGVPGGPGAAVNKAPQAPPPE
                     QLYNDALRDFNAGKNDLASQEFSQYVQVYGNTDLAGNAQFYLGEIQYRQGNLSGAVQS
                     YNKVLDQYPGGNKGAAAQLKKGYALLDLGQRDQGVQELRSLISRYPKSPEAAQARDRL
                     GRLGAAGAAAKRPARPSPSHKEQ"
     gene            complement(1741..2478)
                     /gene="pal"
                     /locus_tag="VE783_07090"
     CDS             complement(1741..2478)
                     /gene="pal"
                     /locus_tag="VE783_07090"
                     /inference="COORDINATES: protein motif:HMM:TIGR02802.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan-associated lipoprotein Pal"
                     /protein_id="HYX53199.1"
                     /translation="MNYSKKHMILAGVMFTLLVLAVGCGKKKPPPPPPPPPKPVTATL
                     SANPTSIQAGQSSTLTWNTENADDVTLDGQKVNATGSQSVSPTQTTTYHLVAKGASGN
                     QDATAQVTVTQPPPPPTPTPVPTPQVTDDQLFAQAAQDIYFDYDKSDLRPESKNTLAQ
                     IAQAMKAHPNWKVQIEGNCDERGSTEYNLALGERRADSARQELLHNGVSGDALKTISY
                     GKEKPVCTEANEGCWQKNRRDHFTLLH"
BASE COUNT          487 a          703 c          787 g          580 t
ORIGIN      
        1 gagaatcgcc acaatccgga gcggggcatc gatccggaat caggcgagcc tgaaatggaa
       61 gcggacctga acgatcagga cccgggagag cgccagaagg aaaaccagaa ccagcagaaa
      121 gacgatccgc tcgcagcctg aagactcatg aatttgtctc ttagcggcga aacttccagg
      181 cctgctgagg gtctaatcga gtaattggcg tttgagtgtc ctcacttcga gcgctgggaa
      241 ggtgagggga gtccagagca gctctccttc actgcttaag ggaagcgatg atgtagggaa
      301 gcggctgcgc cacgggcgca gccgctttga ttttgcggca agctggattt taactgcggg
      361 aaaccagcag ggagtccgtt actatttttg tatgtcgaac ccggggcact tgtaccggcc
      421 gtacgagaag ctggtcagca tcacaattgg agaaaagcaa tttcaggtgc ctgaaggcaa
      481 catgctgctg cgtgccatgc agtttctcgc tcaggaagat gtctcctacg gtcgcttctg
      541 ctggaatgag gagtgccagt attgcagggt agcttatgac ttaggtccgg gaactccgct
      601 gcggaccgct ctttcctgca aattaatggt cgcggaagga atgcgcgtga gcgaggcggc
      661 gcaggaaatc aggtattgct tgcggaagct ggaaacgaac ctgaaagtga aggtttgatc
      721 tattgctctt tgtggctggg agaaggtctt gccgggcgct tggcagccgc gcccgcggcc
      781 cccagacggc ctagacgatc cctggcctga gcagcttcag ggctcttcgg atatcgtgaa
      841 atcaagctgc gcagctcctg tacgccctgg tcgcgctggc ccagatcaag caacgcatag
      901 cccttcttca actgcgcggc cgcgcccttg ttcccgccgg gatactggtc cagaactttg
      961 ttgtaggact gcacggcccc tgagagattc ccctgccggt actgtatttc tcccagatag
     1021 aactgagcgt tcccggcgag atcggtattg ccgtacacct gcacgtactg cgaaaactct
     1081 tgcgaagcca ggtcgttctt gcccgcgttg aagtcgcgca gcgcgtcatt gtagagctgt
     1141 tccggcggag gcgcctgcgg agctttgttg accgccgcac ccgggcctcc ggggacaccg
     1201 gtacccggag cagcctgagg aatgttctgc tgcgcggcct gcatatcatc gagctgcttg
     1261 ctgaccttgg cgagtcgtgc cttcaattcg tctactgcat cgtgcagcgc ctgaacctgc
     1321 cccgaaatct ggtctacttt gctggcctcg tcattagtct gcgcgcccag cgacttctga
     1381 aggttctgga cggccgagcc catcttgttc acattgtcgg tctgctgcgt gatcatctcc
     1441 ctcatcacgc ccatgcgctc gtcaaaagac tgctgcatct tcgccatgtt gtcttgcagc
     1501 agttgcagtt gggtctggat ctggatcaat tgcgacttgg tgtccgccgc gcgcgcgggc
     1561 tggacggtgc aggcggcaag cagaactgta gctagcagga gcagactctt atttttcata
     1621 gacaattcac tcattagatg cagaacggct ggtctgcaac gattttaaat caaagacgga
     1681 gggagcgcgc agtgcaggaa aagatgccgg acgggtgtgg cggcccgtcc ggcggttggg
     1741 ttaatgcagc agggtaaagt ggtcgcgacg gttcttctgc cagcagcctt cgttggcctc
     1801 cgtgcaaacc ggcttctcct tgccgtagct gatggtcttg agcgcatcac cgctcacgcc
     1861 gttgtgcagc agttcctggc gcgcggaatc cgcacggcgc tcgcccaacg cgaggttgta
     1921 ctcggtagag ccgcgctcgt cacagttgcc ctcaatctgg accttccagt tggggtgtgc
     1981 cttcatggct tgcgcgatct gtgccagcgt gttctttgac tccggacgaa gatcagattt
     2041 gtcgtagtcg aagtagatgt cctgcgcggc ctgcgcaaac agctggtcgt ccgttacttg
     2101 cggcgtggga accggagtgg gcgtcggcgg cggtggcggc tgcgtcaccg taacctgagc
     2161 cgttgcgtcc tggttgccag aagcaccctt ggccaccaga tgataagtgg tggtctgtgt
     2221 gggcgaaacg ctctggcttc cggtggcgtt caccttttgt ccatcaaggg tgacgtcatc
     2281 cgcgttctcc gtgttccagg tcagcgtaga cgactggccg gcctggatag aggtgggatt
     2341 tgcggaaagt gtcgcggtta caggtttcgg cggcggcggc gggggtggtg ggggcttctt
     2401 cttgccgcaa cccacggcca gtaccaggag tgtaaacatc actccggcca gaatcatgtg
     2461 ctttttgctg tagttcacct atgtcctccc gaattcttca gttgcggccc tgtcccgggc
     2521 cgtcaaaaaa aacttccaac agatgattta gcgataa
//
LOCUS       DASQYP010000220        23856 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_307622, whole genome shotgun sequence.
ACCESSION   DASQYP010000220 DASQYP010000000
VERSION     DASQYP010000220.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 23856)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 23856)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..23856
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_307622"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(75..449)
                     /locus_tag="VE783_07095"
     CDS             complement(75..449)
                     /locus_tag="VE783_07095"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HYX53200.1"
                     /translation="MRHTILLVDDDPAHLQIYAGVLKQAGYRPITALIGKSGVSFPEH
                     EIPTLVLMDYRFNSGLGPRDIAYLIRERYPGATLILLSSLPDLPADMADLVHGFIQKR
                     DPEYVSAAVQVWLQRSAAANKS"
     gene            complement(1838..2038)
                     /locus_tag="VE783_07100"
     CDS             complement(1838..2038)
                     /locus_tag="VE783_07100"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53201.1"
                     /translation="MQIKFADGTTLDIAPAALDAFLKHDLKWVEFVHGRASFKAIPNG
                     KLPIQAAKPVSASVTRCPGRAC"
     gene            complement(2289..3572)
                     /gene="serS"
                     /locus_tag="VE783_07105"
     CDS             complement(2289..3572)
                     /gene="serS"
                     /locus_tag="VE783_07105"
                     /EC_number="6.1.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003218092.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004828 - serine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006434 - seryl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine--tRNA ligase"
                     /protein_id="HYX53202.1"
                     /translation="MLDLAFVRDNLAQVEEMMRRRGGDPTVLARFRETDEKRRKLITE
                     SETLKAERNRKSEEIARLKKSGQDASAQMAETKALREKGEALEKQAGEIDQEIRTLLA
                     GIPNMPHQSVPVGHSADDNQEIRKWGTPPQFSFTTKPHWELGEQLGVLDMERATKLSG
                     ARFAVYWDLGARMERALASFMLDLHTSQHGYTEVLPPYMVNSASMYGTGQLPKFASDL
                     FKCEEHDLWLIPTAEVPLTNLYRDEFIDAARLPLSITGYTPCFRSEAGSYGKDVRGII
                     RQHQFQKVELVKFTRPEDSYAQHDQLTRNAEAVLQKLGLHYRVMLLCTADMGAASAKT
                     YDLEVWLPGQQLYREISSCSNFEAYQARRANIRYRPEGSKKSEYVHTLNGSGLAVGRT
                     WLAILENYQQADGSVIVPEALRPYMGTDRITAKKF"
     gene            3853..4344
                     /locus_tag="VE783_07110"
     CDS             3853..4344
                     /locus_tag="VE783_07110"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53203.1"
                     /translation="MAQLSQYLHGTGEVTQSGGVVFLTVEYFFYPVSLLLGYFTVEGF
                     LRFAAGLITSEVLPTLPLYLTEKVISYRAEHRRHKELSALPPDLVEHLGNGRVLVASA
                     VEKAAWNETVTIVIEGSWYRVEEKRRGKAPRPFEYVLAPAAEGRVLRRLEEYPPPAED
                     VKS"
     gene            complement(4526..4759)
                     /locus_tag="VE783_07115"
     CDS             complement(4526..4759)
                     /locus_tag="VE783_07115"
                     /inference="COORDINATES: protein motif:HMM:NF012790.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhodanese-like domain-containing protein"
                     /protein_id="HYX53204.1"
                     /translation="MPESTPATLATISRNELKQKLDRHDHFLLVETLAPEYYNHSHLP
                     GALNLPPDQVRELAPTLLPDKTADIVVYCAKPT"
     gene            4946..5692
                     /locus_tag="VE783_07120"
     CDS             4946..5692
                     /locus_tag="VE783_07120"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53205.1"
                     /translation="MSPRKAAIKLILFCFLVVAGCKTPPHTAEGGPPAAANMPPPLSS
                     PSPPTTAGSATSPPQEKTQKLSAVVQQIFAAANVTGSLTERCRCAREHLLETYSLPEN
                     FPAEPMETALKELEKHYPGFHDSHDRKGRVRLTDSTARGGLLRVRVKEFNVVEDHPPQ
                     AALAALWRVPEVETYLRAHAMRPGRGAQNVAVQKTAPLVIQMKNVTVADILDRIVETH
                     HGDSAAGRFTLWVYRECHSGAETIIDFKLL"
     gene            5782..6603
                     /locus_tag="VE783_07125"
     CDS             5782..6603
                     /locus_tag="VE783_07125"
                     /inference="COORDINATES: protein motif:HMM:NF024118.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HYX53206.1"
                     /translation="MLPVMCVRMTVLASGSRGNCTVLSSHNASILVDAGISCRETLKR
                     MKDAGENPEQLKGIVISHEHNDHVAGLEVLARKLKIPVYLSEATYHRWRREHRDDEGR
                     PLTLERREQFEPGRSFEIADITVTPFTIPHDAADPCGFTFKASGVKIGMVTDLGYMPP
                     NVKENLRGCDGLMIESNHDLEMLRNGPYPWMVKQRVMSRVGHLSNTALAEFFEKDYDG
                     SAAFLVLAHLSEENNHPELARATAHNALGNKMTLFQSAHIILAHQDKPLQPLTLG"
     gene            6655..7107
                     /locus_tag="VE783_07130"
     CDS             6655..7107
                     /locus_tag="VE783_07130"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53207.1"
                     /translation="MSKGCTDRVIGDILAGWRYDISGLAAEMKGDYEQHLAECEHCHS
                     RQVFHRTIDIGLMIVAAVSAVMFLVAFGAVRHYSPRHALVLELIALAGFLFFSVVWLI
                     VAVATPAPVVVADVARIQAKRIHDRLPSNIRQKLPEVTQEFLKKNSGT"
     gene            complement(7104..8081)
                     /locus_tag="VE783_07135"
     CDS             complement(7104..8081)
                     /locus_tag="VE783_07135"
                     /EC_number="1.3.1.14"
                     /inference="COORDINATES: protein motif:HMM:NF005574.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004152 - dihydroorotate dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0006221 - pyrimidine nucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroorotate dehydrogenase"
                     /protein_id="HYX53208.1"
                     /translation="MATTPSTENPAAQQDSPSTSRRPDLSVRFAGISFKNPVIAAAGT
                     FGYGIEFEDIVTLEKLGGFVTKGLSREPIVGNPPPRLFETSAGMLNSIGLQNIGARAF
                     IEEKLPRLDKKKNVVVIANVFGYTREDYIETIRILNEAEGITAYELNVSCPNTHEGGM
                     VFGTNRTMLEELVANCKSASRRPLIVKLSPNVTSIPAMAKAAENAGADALSLVNTFVS
                     MAIDATTRKPRISNITAGLSGPAIKPIALRMVYEAAHTVDIPVIGIGGISTAEDVVEF
                     MLAGAAAIQVGTANFWDPCATEKIIDGLQRWCVEHRVKRVTDLTGALEV"
     gene            complement(8139..8792)
                     /locus_tag="VE783_07140"
     CDS             complement(8139..8792)
                     /locus_tag="VE783_07140"
                     /inference="COORDINATES: protein motif:HMM:NF025380.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4230 domain-containing protein"
                     /protein_id="HYX53209.1"
                     /translation="MSEASRAAANKPSSYAVGLSWGLIAGALFVLVVMLLAGRSQSGP
                     LASLWSAITGRNTRIVSQGTVVERIQRLQRMETVVYNMDKIVTGEKGSPFLPNFLAGD
                     RMLMIVHGQVVAGIDFAQLRPGDIRIEGRDIRVKIPQPRILVTRLDNARTRVYSRSTG
                     LLVPVDPNLESEVRQQAEGELLDEAGRTGILKTAGDNARTTLTTLLLGMGFEKVEIE"
     gene            complement(8892..9677)
                     /locus_tag="VE783_07145"
     CDS             complement(8892..9677)
                     /locus_tag="VE783_07145"
                     /inference="COORDINATES: protein motif:HMM:NF012955.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HYX53210.1"
                     /translation="MQQIGPDLYAYISEIDSSANATFLVSSEGILVVDTGANQTEASK
                     LLTAIRKISQAPVRYVINTHYHPDHSGGDVLIGSGATIFSAGFTREKVAAMNNGKLAH
                     QSWITFPGAVTIHLGGHQVRIYHPGPAHTLGDVVVYFPDQHALATGDLFLTNSCPAMD
                     QGDLENWIAALDHMLTLPVERVVPGHFELATHADLEKFRNYLRDLATQVKAMYGKGMK
                     LPEIEKSLRLPGYRNFRQYPNYEATFADNAAAYYQQLENRAKH"
     gene            complement(9752..10495)
                     /locus_tag="VE783_07150"
     CDS             complement(9752..10495)
                     /locus_tag="VE783_07150"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HYX53211.1"
                     /translation="MKFSRQRGRPAADLIAQIDLNSPKTIIDLGCGTGTSTEQLHQRW
                     PNAEITGLDSSPKMLDSAREVHPEWQWIESGIESWQPDEPYDLVFSNAALHWVPDHGR
                     LFPALLNAVADRGILAIQMPNNFQAPAHLAMKKGGADSRWAGALGDAAENIFIQPAAF
                     YYNALRKFARSVNIWETEYFQVMDGPRAVLDWMRSTAMRPYLSRLANDVQRNQFEQFC
                     LEEYERLFPGDDQGKSLFPYKRMFIVACK"
     gene            complement(10713..11663)
                     /locus_tag="VE783_07155"
     CDS             complement(10713..11663)
                     /locus_tag="VE783_07155"
                     /inference="COORDINATES: protein motif:HMM:NF012698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix domain-containing
                     protein"
                     /protein_id="HYX53212.1"
                     /translation="MPPPVARYRFDDFEADLRAAELRRRGIRLKLQLQPFQLLVALLE
                     RPQDVVTREELCQRLWPDDTFVDFDHGLNTAVAKLRDVLGDSASKPKYIETIAKRGYR
                     FVGTVESVAAPTPPVPASTSTPVALETVTIPAPPQKGAQTSPGVSAESSGSPAPASHS
                     DISAQQDAPQAERPPGEHELPLASRQLSRTLFILAQVMYLIFYFSALFRLDNLHASAD
                     MAWHSAGLIAFILYLVTALVGVAVRLYLISATSLDYHLLGQKVRVIFPALFVLDMIWA
                     LSPLLISDRIGFGLALAATAALIYMPFAQRTLVKMIEAAD"
     gene            11823..12758
                     /gene="miaA"
                     /locus_tag="VE783_07160"
     CDS             11823..12758
                     /gene="miaA"
                     /locus_tag="VE783_07160"
                     /EC_number="2.5.1.75"
                     /inference="COORDINATES: protein motif:HMM:TIGR00174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0052381 - tRNA dimethylallyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (adenosine(37)-N6)-dimethylallyltransferase
                     MiaA"
                     /protein_id="HYX53213.1"
                     /translation="MSEPLLVVLVGPTASGKTALSLALAKKFCGEIVSCDSVAVYREF
                     EIGTAKPSPAERQRIPHHLIDVVEPEGQLSAGDYSRLARQAIHEIAARGHLPIVVGGT
                     GLYLRALLEGLFAGPPRSEELRSRLRDRAQERGGEYLHRMLRRFDPKAAEAIHANDVS
                     KIVRALEVSISARQPMTEMWQQGRDPLRGFRILRLGLNPNRDDLYARINQRAAQMFEQ
                     GLVEETKRLLDRYGKKPWPLGSLGYKQARQLLAGELTREQAIAAAQQGHRNYAKRQMT
                     WFRREPDVEWLHGFGDDAAIQQCARDLVRAALVEQ"
     gene            complement(13002..13265)
                     /locus_tag="VE783_07165"
     CDS             complement(13002..13265)
                     /locus_tag="VE783_07165"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53214.1"
                     /translation="MASINADAVALHFENILVASVRNILTFPPKIKGVFVLNTRFNYC
                     PLIDLLSTETWLRDVATSFSFSQLSSWSPLTHFLLQGFETGSL"
     gene            13264..13443
                     /locus_tag="VE783_07170"
     CDS             13264..13443
                     /locus_tag="VE783_07170"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53215.1"
                     /translation="MMVSFGLPAHADRDRNCEQHIRKAESKLQQAIHKHGARSRQAEQ
                     RRRELEEVRERCRHR"
     gene            13555..15546
                     /locus_tag="VE783_07175"
     CDS             13555..15546
                     /locus_tag="VE783_07175"
                     /inference="COORDINATES: protein motif:HMM:NF013117.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="mechanosensitive ion channel domain-containing
                     protein"
                     /protein_id="HYX53216.1"
                     /translation="MPRSTKISCLLLLPLFLLGLFELQGQTSSATAQPQGSPSAQQQS
                     AQPAQAPSGSGGEDIIPFLNQLIVWYRQLASQQQLATEPSDVLFLNDNRQLADQIVKL
                     GFDYARARAQVIASQTASAAPDQNGGQSQYQRIVQAAARADQQVKNSQQEVARLQQKL
                     ETATAKQRRDLLAQIAETQSELDFAEARRDSLRGMVQFATGATAGGTGPGNLAAQIEE
                     LARAVPAATVAGKEAADAARQTNAANTAAATAKERKEEPTGMLGLISDLFDLRRKLHA
                     VDDNIRQTEQLTQASRALRTPLTTTIRELTQKGDQLAAQPPATDPAVLAQQRKDLDAM
                     TQQYKQLSASLLPLGKQNILLDVYKRSSTNWRNSVESQYQAELKSLILRLGGLAVILA
                     VILGVSDLWKRATFRYVTDPRRRYQFLLLRRILMWVVILIVVVIAFASELGTITTFAG
                     LMTAGIAVALQNVILSVAGYFFLIGKYGVRVGDRVQVAGITGDVVDIGLVRLHLMEVT
                     GGSAPRPTGRVVVFSNAVVFQANAGLFKQIPGTSFVWHEVKVTLAPEGSYREVEKRML
                     EAVNKVFADYRDRMETQRLGMERALSTVRISNFAPESHLHLASGGLAVIIRYPVEISN
                     APEIDDRVTRELLDAIEREPRLRLLGSAGPEIKVEEQPA"
     gene            15803..19402
                     /gene="nifJ"
                     /locus_tag="VE783_07180"
     CDS             15803..19402
                     /gene="nifJ"
                     /locus_tag="VE783_07180"
                     /inference="COORDINATES: protein motif:HMM:TIGR02176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA];
                     GO_function: GO:0016903 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors [Evidence IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA];
                     GO_process: GO:0022900 - electron transport chain
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate:ferredoxin (flavodoxin) oxidoreductase"
                     /protein_id="HYX53217.1"
                     /translation="MKNRPRVTIDGNEAAAWVAHKINEVIAIYPITPSSAMGEWSDQW
                     SSEGKTNIWGTVPQVIEMQSEAGAAGALHGALQGGALATTFTSAQGLLLMIPNMYKIA
                     GELTPAVIHVAARSLATHALSIFGDHQDVMAVRQTGWGMLASNSVQEVMDFALISQAA
                     SMDARLPFVHFFDGFRTSHEIAKVEQLQPEDLAAMITPQMVERHRRRALSPEHPFVRG
                     TAQNPDVYFQSREAANPYYLAAPLIVQDTMDQFAQITGRQYHLFDYVGAPDAESVIII
                     MGSGAEVVEETLQKLNARGGKYGLMKVRLYRPFSVEHFIKALPSTVEAIAVLDRTKEP
                     GAIGEPLYADVVTALSEAESADTHLVQPLPKVIGGRYGLSSKEFTPAMVKAIYEELEK
                     ERSKKHFTIGIYDDVTHTSVDFDPEFSTEDPETVRALFYGLGADGTVGANKNSIKIIG
                     EDTELYAQGYFVYDSKKSGSLTISHLRFGPKPIRSSYLITQANFVACHQFAFLERVDV
                     LKYAEPGATFLLNSLYGADDVWANLPSAIQQEIIAKQLKFYVIDGYKVAKEAGMGGRI
                     NTIMQTCFFAISNVLPREQAIDAIKRAIRKTYIKRGEAVVQKNFDAVDRTLHNLFEVK
                     VPETVTSKSRPYQVVPEFAPEFVQRVTGPIIQGNGDLLPVSALPVDGTYPSGTSQWEK
                     RNIALEIPAWDTELCIQCGKCVLVCPHSVIRAKLYESDKLKAAPAEFLSAPARWKDMG
                     HMKYSLQVSPEDCTGCSLCVEVCPAKSKTDPAHRAVNMVPQPPVREREKKNWDFFLSL
                     PEFDREKVSFSQVKDVQLLQPLFEFSGACSGCGETPYLKLLSQLFGDRTVIANATGCS
                     SIYGGNLPTTPYTFNKDGRGIAWANSLFEDNAEFGLGIHLAQEKQAEHARALLARLAS
                     LFGEELTRNILDADQHNEAGIHAQRERVNFLREKLEPLRKDNSEVRELLSIADALVKR
                     ATWIVGGDGWAYDIGYGGLDHVLASGRNVNILVLDSEVYSNTGGQASKSTPRGAVAKF
                     ASGGKPGAKKDLALMAMAYGNVYVARVAMGAGDMQTLKAFNEAEAYPGTSIIIAYAPC
                     IAHGIDLVHSLDQQKLAVQSGHWPLFRFNPALASEGKHPMQLDSKAPSVPLEKYLYNE
                     TRYTSLQQAHPEEAKQLLELAQHDVIERWKMYETFANMSPDGKVELPEAAKAK"
     gene            19486..20829
                     /locus_tag="VE783_07185"
     CDS             19486..20829
                     /locus_tag="VE783_07185"
                     /inference="COORDINATES: protein motif:HMM:NF019604.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HYX53218.1"
                     /translation="MKTVFVIGAGPAGLFAAQKIAQAGHQTIIFNRDIKPGGLAEYGI
                     YPTKDKMKIGLRKQFAKVLSLPNVHYFGHVPISNDSAVTISELRDWGPSAIVFSVGAQ
                     GTKKLGLPGETAGGVYAAKDFVYHYNLLPPYTSHNFSTGKRVAIVGMGNVMVDIARWL
                     LLDAPVKTAEEVVVVARRGPFEAKFDQKEFDHIEQFLDRAAFDQELARIQPQLAAVGQ
                     DISKLKDETFPILGKPAEPVSGARLRFRFLCQPKEIKADPSGRINKLLVTENVLAERE
                     GSISCKSTDKTAELDVDTMIFAIGDVADPSLGVPYNRDAYVTNPNVGEDPKCSAAYQL
                     YDPAEKKVLDGMYAVGWARRASDGLVGIARHDGEVGAAHVLKYLETAPDGKSISPDQI
                     RRQLERKNLKVIDKADLECLGRVEEKVAKERSIAWFKFDKDEEMLIAIESEKAKA"
     gene            complement(20985..23492)
                     /locus_tag="VE783_07190"
     CDS             complement(20985..23492)
                     /locus_tag="VE783_07190"
                     /inference="COORDINATES: protein motif:HMM:NF019351.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005507 - copper ion binding [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="multicopper oxidase domain-containing protein"
                     /protein_id="HYX53219.1"
                     /translation="MSFIYLPEDASRARKREAEEARKNRAEIVKAFSQGKVSRRDLVK
                     WGLISSAGLLAPIQGLNPFVQSAYASKGGPSGGGRGGDGGIDTSSNPTGIPRSPLFGA
                     QPFTQAMPRFDVLQRGTNPMGGDLTPAPTAESNQTLQAVDPVLGGGFGPIEGRPPGPV
                     WSHQQFATHMPQISVEASQMGATTNTVYNPGVDSSLNSGINPSDSIPLKFHPSMPTQS
                     PLSVWTFNGTIPPKLVQGRYGEPILFRHHNKLPADVTQNGGFGRHTISTHEHNGHHGA
                     ENDGFTGAYFFPGQFYDYHWPIVLAGCNSINTDATDPRAGSPADNGGINKVAGDWRET
                     MSTHWFHDHMFSFTSQNVYKGNAAMFNIYSALDRGNEEINDGVNLRLPSGTAKSWGNL
                     DYDVNLMIADKAFDSSGQLHFDIFNFDGFLGDVMTVNLAYKPYFEVERRKYRFRILNA
                     SVSRFFKIALSDGSQMIQIANDGNLLPSPVALTQLDEQGIAERYDVVIDFSRYSIGDK
                     LWLVNLCQHSDGKKPAADLTLAQALSGTSADPCVGKFLEFRIVRDPAQADQSQVPAQM
                     IPNPDLSNIPVSAERTFVFGSGASQNISDGATSFSGPWGISTDGGSMRAASFGRVSAA
                     PKYGTREVWTLQNGGGGWDHPIHIHFEEGQILARNGSASAVPAWEKGRKDVYRLRPGG
                     SVTLTMQFRDWGGMFMEHCHNTVHEDNAMLLRWEMNGAGSPFLAPLPTPIPTPQGVTF
                     VPADEVLATAFTGGTGNGGNGGSGSGGGSGSGGGSGSGGGSGSGGGSGSGGSGLKGGG
                     GSGGSGKGGSGLRGGGGGAESGISGGGGRGGRGGRGR"
BASE COUNT         4989 a         6766 c         7299 g         4802 t
ORIGIN      
        1 tttctttacc gtggaggggg cgcaggggaa gaggaacgtt ccggtagcgc gtgattctcg
       61 acgggtggga tgactcagga cttattggcc gcagcggagc gctggagcca gacctgaacg
      121 gctgcggata cgtactcagg atcgcgtttc tgaataaacc cgtggaccag gtcggccata
      181 tcggccggaa gatccggcag ggatgaaagc aggatcaatg tggcaccggg atagcgttcg
      241 cggatcaagt aagcaatgtc acgcgggccc aatccgctat tgaagcggta atccatgagc
      301 actagcgtgg gtatttcgtg ctccgggaag ctgaccccac tttttccgat caaggcagtg
      361 atgggccggt agccggcctg cttcaacacg cccgcataaa tctggaggtg ggcaggatcg
      421 tcgtctacga ggaggatggt gtgccgcatg ggggccggaa aagagacgcc tgtgagttta
      481 gcgcgaacgg cgggagcacg caaagttctc agacggcggg gtttatgccc tgcgggcgca
      541 gtggtgaagg gcctctacaa acaagagcca gattttgaat ttgctggccg cgatcaagtc
      601 cccgcaacgg acgcagtaag agatgagcag ttccggatgg gtgcgcgagg gagagtgtct
      661 aaagggcatt ggcggtgcgc cgacaggtga ccagcttctt agatgcagca aatgggttgc
      721 ggaactctgg ttttctagag ctagaaccaa gccaagcaga aaagttgcgc tttttatttt
      781 tctttttgtc gtaattttct gcttgacagg cgaacgtaaa tggggcgaag atgagaaact
      841 gagccattag cctttggcca ttagccttgg cttgagctca taaggagcta agatcgttgc
      901 ggaagccgtc actggccccc aaagccggtg agaaagacaa gaaacctgca agttaacccc
      961 gctgtaagca agtcccggaa gtcgctgtaa gaaatgtccc gaggtaagga gatccgccgc
     1021 tgtggatacg caggcctttt cgtcggttgc acaaaaacca acagcacact tttcggcgca
     1081 agggacgcaa agacggcaga ggaaggcttg ggacagcttc caccccaaca agccaaaaac
     1141 gggcttgtcg ggggccccgg gttgggacag ggtcgggatc aactgggata tcccggtggg
     1201 acgaccccgg gatcaactgg gacgaggtcg ggacgaatcg ggatgaacgt ggaaaaatta
     1261 atttgccgta gatttccgca gatgaacgct gatcagaagt agggctcaga agtgatgctt
     1321 cccaggaggc accgacgaga gtcgggaacg atcttcgaca actgaatagc agcaaatagc
     1381 aattagcaat cggcaattag ccgcacacga gctgttagca acctggtaaa cgaggcgtgc
     1441 gtaggctgga cgacctggtg cgaccgagct tcccggattt tcggggagcc agccgggaag
     1501 ctcgccgggg agggtccggc gagctcggac gtaagtcttt tgttttcggg gaggggtggt
     1561 gggtaccccc gggggctctt ccgccgttaa ccaagtagta catttggcac ggtggaaggt
     1621 ggtgagaatc gccggaaacg cacgagatcg ccgtcagcgc cggaattgcc gtgatcgaag
     1681 agcaaaaccc gagtcgccgc gaatcaatgc gaaaaagcgc cgacaaggat cttagccata
     1741 gacgactaca gatgaacaca actacgcctg gcacggcttg ggaagaaggt cagggatgga
     1801 ttgcgatatc ccgaattccg aggctaactg tgaaatttca acaggcgcgg ccgggacagc
     1861 gggtgacgct tgcggaaacc ggcttggccg cctgaatggg aagttttccg ttgggaatgg
     1921 ctttaaatga ggctcgaccg tgaacgaact cgacccactt gaggtcgtgt ttgaggaagg
     1981 cgtcgagcgc tgcgggggca atatccaggg tggtgccgtc ggcgaatttt atttgcatgc
     2041 ctgcctccat agtggtttgt tttcttctac atggataaga tgcagcggct ggtgcccagg
     2101 gtgcagaaat gcagtaaata gtgatgagta attggtaatt agcccttagc cgttggcctt
     2161 tagccattgg cggtcagcgg gttggtgctg atcgctttcc gatgcgcgct ccgccgttcc
     2221 aaccgccgca ctcgttgacg acgctgctaa cggctagttg ctaactgcta attacttatt
     2281 actgttgctc agaacttttt ggcggtgatg cggtcggtgc ccatgtaggg acgcagcgct
     2341 tcgggcacga tcacgctgcc atcggcctgc tggtagttct caaggatggc cagccaggtg
     2401 cggcctacgg ccagtccgct gccgttgagg gtatggacgt actcgctttt cttgctgccc
     2461 tccgggcggt agcggatgtt ggcgcggcgc gcctgatagg cttcaaagtt cgagcaggaa
     2521 gagatttcgc ggtaaagctg ctggcctggc agccagacct caagatcgta agtcttggcg
     2581 gaggctgcgc ccatgtcggc ggtgcagagc agcatgacgc gatagtgcag cccgagcttc
     2641 tgcagcacgg cttcagcatt gcgcgtgagc tgatcgtgct gggcgtagga atcttccggc
     2701 cgggtgaact tgaccagctc aactttctgg aactggtgct ggcggatgat gccgcgcacg
     2761 tccttgccat aagagccggc ttcactgcgg aagcacggtg tatagccggt gatggaaagc
     2821 gggagacgcg cggcgtcaat aaactcgtcg cgataaaggt tggtgagcgg gacctctgcg
     2881 gtggggatga gccagaggtc gtgctcctcg cacttgaaga ggtcgctggc gaacttggga
     2941 agttgacccg tgccatacat ggacgccgaa ttcaccatgt agggcggcag gacttcggtg
     3001 tagccgtgct ggctggtatg gagatcgagc atgaagctgg ccagggcgcg ttccatgcgg
     3061 gcgcccaggt cccagtagac ggcgaagcgc gcgccgctga gcttggtggc gcgctccatg
     3121 tcgagcacgc cgagctgttc gcccagctcc cagtgcggct tggtagtgaa actgaattga
     3181 ggaggcgttc cccatttgcg gatttcctgg ttgtcatcgg cagagtggcc caccggcacc
     3241 gactggtgcg gcatgttggg gatgccggcc agcagggtgc ggatttcctg gtcgatttcg
     3301 ccggcctgct tttccagcgc ctcgcctttt tcacgcagcg ccttggtttc ggccatctgc
     3361 gcggaggcgt cctggccgga cttcttgagc cgggcgatct cttccgactt gcggttgcgc
     3421 tccgccttga gcgtctccga ttcggtgatg agcttgcgcc gcttttcgtc ggtttcgcgg
     3481 aaacgggcga gcacggtggg atcgccgccg cggcgccgca tcatctcttc cacttgcgcg
     3541 aggttgtctc ttacgaaggc caggtcgagc atagaaacaa ctagcttaac atccgcgaaa
     3601 gcgccgcgcg gcggagttct acaggactcg ccattactgc gcacgcatga ggctggctat
     3661 aatcgccggt tgcgcctgcc tgatcccatt cgcgatgccc tgctttcttt ttgcccggct
     3721 gagtggcgac gaaggcgccc gcccgaatcg cctgcggtgg ttctgcgggc ggccaccttg
     3781 ggaggcctgc ttcaatttct gctgttcgga gttttttcag ctctgcgata tcgcagcttc
     3841 atggctcagc ggatggcaca attatcgcag tacctgcacg gcacaggcga agttacacag
     3901 tccggcggcg tggtgtttct taccgtcgag tacttcttct acccagtttc tctgctgctg
     3961 ggttacttca cggtagaggg cttcctgcgt tttgcagccg ggctgatcac cagcgaggtc
     4021 cttccgacac tgcctctcta tttgacggag aaggtaatca gttaccgggc ggagcacaga
     4081 cggcacaaag agttgagtgc tttgccgcca gacttggttg agcacctggg caatggccgg
     4141 gtgcttgtgg ccagtgcggt cgaaaaggcc gcctggaatg aaaccgtgac gattgttatt
     4201 gagggaagct ggtaccgggt ggaagagaaa aggcgaggca aagcgccacg cccattcgag
     4261 tatgtgctgg cgccggccgc tgagggacgt gtgcttcggc gcctggaaga gtatccgcca
     4321 ccggccgaag atgtgaagag ctgaaggtgc gaagagcgga aggtcgctgg aaaagcgggg
     4381 cttctatcgc gcttcagctg cggtggcgcg cgttgccctc caccggcaga ccggcgtcca
     4441 tccagtcctg tttgcctgcg gaatagtcgc gcacattttt gtagcccatg gccgccagtt
     4501 cacgggcggc gttttctgag gcgtgtcagg tgggcttggc gcagtagacc acaatgtcag
     4561 cggttttgtc cggcaggagc gtgggcgcga gttcacggac ctggtcgggc ggcaggttga
     4621 gcgcgccggg caggtgcgag tggttgtaat actcgggagc aagcgtctcg accagaagga
     4681 aatggtcatg gcggtcgagc ttctgcttca gctcattgcg gctgatggtg gccagcgtgg
     4741 cgggcgtgct ttcgggcatg caggtgttat cctcccgcaa cattcgatgc gggccggcgg
     4801 cgaaagatac accagcttgg ccgccagcgc ggggcgtcgt ccgcagattg tttgcagatc
     4861 tccgggcgtg acttttgtta tgcgcctggg tgattttttg ctgagaagcg gcgcaagtgc
     4921 ggctattctg gggagcaagg tgacattgag cccgcgtaag gctgcaatca aactcatcct
     4981 gttctgcttc ctggtggttg ccgggtgcaa gacgcctccg catacggctg agggcggccc
     5041 gcctgctgcg gcaaatatgc cgccgccgct gagcagcccg agcccaccga cgacggcggg
     5101 ttcggcaacg tcgccgccgc aagaaaagac gcagaagctc agcgccgtgg tacagcagat
     5161 tttcgccgcc gcgaacgtta ccgggtcgct gaccgagcgc tgccgctgcg cccgcgagca
     5221 cttgctggaa acatattcgc tgccggaaaa ctttcccgcg gagccgatgg aaaccgcatt
     5281 gaaggagctg gaaaagcatt atcccgggtt ccatgattcg catgatcgca aaggccgcgt
     5341 aaggctaacg gacagtacgg cacgtggcgg actgctgcgt gtccgggtga aggaattcaa
     5401 tgtggtggag gaccatccgc cccaggcagc actggctgca ttgtggcgcg ttcctgaagt
     5461 agagacgtat ctgcgcgccc atgcgatgcg gcctggtcgc ggagcgcaga atgttgcggt
     5521 acaaaaaacc gcgccgctgg tgatccagat gaagaacgtc actgtcgccg atattcttga
     5581 tcgaatcgtg gaaacgcatc acggcgattc tgctgccggc cgcttcacgc tttgggttta
     5641 ccgggaatgc cattccggcg cggagactat tatcgacttc aagctgctct gatcgcatgg
     5701 ctgcggttaa aaaagaattt gctgccgcga attccacagc ccgaacctaa attgtgcttc
     5761 ccctcgccga attttcgctt tatgcttcct gtcatgtgcg tgcggatgac agttctggcc
     5821 agcggcagcc gtgggaactg caccgtgctt tccagtcaca acgccagcat cctggtggat
     5881 gcgggcatct cttgccgcga aaccctcaag cgcatgaagg atgccggcga gaatccggag
     5941 caactgaaag gcatcgtcat ctcgcacgag cacaatgacc acgtggccgg acttgaggtg
     6001 ctggcacgca agctgaagat cccggtctac ttgagcgagg ccacctatca tcgctggcgg
     6061 cgcgagcacc gcgacgatga aggccggccg cttacgctgg agcgtcgcga acagttcgag
     6121 ccgggccgca gcttcgagat cgccgacatt acggtgacgc ccttcaccat cccgcatgat
     6181 gccgccgacc catgcggctt caccttcaag gcttcaggag tgaagatcgg catggtcacg
     6241 gaccttggct acatgccgcc gaacgtgaaa gaaaatctcc gcggctgcga tggcctgatg
     6301 attgagtcca atcatgacct cgagatgctg cgtaacgggc cgtatccgtg gatggtcaag
     6361 cagcgcgtca tgtcgcgggt ggggcatctt tccaacaccg ccctggcgga gttctttgaa
     6421 aaagactatg acggctcagc cgccttcctg gtgctggccc atctctctga agagaataat
     6481 catcctgaac tggcccgggc caccgcccat aacgccctgg gcaacaagat gaccctgttt
     6541 cagtcagctc acatcatcct ggcgcatcag gacaagccat tgcagccact caccctgggg
     6601 tgagaacata tttaaagaat tgttaatacc tattggcagg acttgaggct cgatttgagt
     6661 aagggttgca ctgaccgggt aatcggcgac attctcgccg ggtggcgtta cgacatctca
     6721 gggctcgcgg cggagatgaa gggcgactac gagcaacacc tggccgagtg cgaacattgc
     6781 catagccgcc aagtatttca tcgcacaatc gatattgggc tgatgattgt ggcggcggtt
     6841 tcggccgtca tgttcctggt cgccttcggg gcggtacggc actactctcc gcggcacgcg
     6901 ctggtgcttg agctcatcgc gctcgccgga tttctgttct tctcggtggt ctggctgatt
     6961 gttgcggttg ccacgcctgc acccgtggta gtggccgacg tggctcgcat ccaggccaag
     7021 cgcattcacg atcgcctgcc cagcaatatt cgccaaaagc tgccggaagt cacgcaggaa
     7081 tttttgaaga agaacagcgg aacctaaact tccagcgctc cagtcaggtc agtcaccctc
     7141 tttacccgat gctccacgca ccagcgctgc aggccgtcaa taatcttttc ggtcgcgcaa
     7201 ggatcccaga agttcgccgt gcccacctgg atcgccgccg cgccggccag cataaactcc
     7261 acgacgtctt ccgctgtgct gatgcccccg atgccaatca cgggaatatc cacagtgtgc
     7321 gcggcttcat acaccatgcg cagcgcgatc ggcttgatcg cggggccgct cagccccgcc
     7381 gtgatgttgg agatgcgcgg cttgcgcgtg gtcgcatcaa tcgccatgct aacaaacgta
     7441 ttcaccagtg agagcgcgtc agcccctgcg ttctctgcgg ccttggccat agcggggatg
     7501 ctggtcacgt tgggactgag ttttacaatc agcggccgcc ttgaagccga cttgcagttg
     7561 gccaccagct cttccagcat ggtgcgattg gtgccaaaca ccattccgcc ttcgtgcgtg
     7621 ttgggacagg agacattcag ctcgtaggca gtgatccctt ccgcttcatt caggatgcgg
     7681 atcgtctcaa tgtagtcctc gcgcgtatag ccgaaaacat tggcgatcac caccacgttt
     7741 ttcttcttat cgagccgtgg cagcttctcc tcaatgaacg cccgcgcccc aatgttctgc
     7801 agcccgatgg agttcaacat cccagcggac gtctcaaaca gcctcggtgg gggattgccc
     7861 acgatgggct cgcgcgacaa gcccttggtc acgaacccgc ccagcttttc cagcgtgacg
     7921 atgtcttcaa attcgatgcc gtagccaaac gttcccgctg cggcaatcac cggatttttg
     7981 aaactgatgc cggcaaaccg aacgctcagg tcaggcctgc gcgaagttga aggtgaatcc
     8041 tgctgcgcgg ccggattttc cgtgctgggg gtggtagcca ttgcctcaag tgtaacctca
     8101 gtgggcgcag gagatgaagt cacaggaggg ctaagccgct attcaatttc cactttctca
     8161 aatcccattc cgaggagtag cgtcgtcaac gttgtgcgcg cgttgtcccc ggcggttttc
     8221 aggatgccgg tgcggccggc ttcatccagc agttcgcctt cggcctgctg cctcacttcc
     8281 gattcaagat ttgggtctac tggcaccagc agcccggtgc tgcgcgaata aacgcgggtg
     8341 cgcgcgttat ccagccgcgt gacaaggatg cgcggctgcg ggatctttac gcgtatgtcg
     8401 cggccctcaa tgcggatgtc gccgggacgg agctgcgcaa aatcgatccc ggccaccacc
     8461 tgtccgtgaa cgatcatcag catgcggtcg cctgccagga agttgggcag gaacggcgag
     8521 cctttctccc cggtaacgat cttgtccatg ttgtaaacca cagtttccat ccgctggagc
     8581 cgctggatcc gctcaaccac tgttccctgg ctcacgatgc gagtgttgcg tccggtaatt
     8641 gccgaccaca gcgacgccag aggcccggac tgcgagcgtc cggccagcag catgacgacg
     8701 agcacaaaca gcgcgccggc aataaggccc cagctgagac cgacagcata agacgatggt
     8761 ttgttggcgg cagcgcgcga agcttctgac atggcgactc ttattgtaag tttcgttgcc
     8821 gtgccgagaa acaaggtgct tagtcaccaa agggctgcgg cgtcacataa ggaagtggca
     8881 gcaatggcgg gttaatgctt ggcgcgattt tccagttgct gatagtacgc agcggcgttg
     8941 tcggcgaagg tggcttcata gttcggatac tggcggaagt tgcgataacc cggaaggcgg
     9001 agcgattttt cgatttccgg cagcttcatg cctttcccgt acatggcttt aacctgggtt
     9061 gcgaggtcgc gcaggtaatt gcggaatttc tccaggtcag catgcgtcgc cagttcaaag
     9121 tgcccaggca caacacgctc cacgggcaaa gtgagcatgt gatccagcgc ggcaatccag
     9181 ttttccagat ctccttgatc catcgccggg caggagtttg tgaggaacaa gtctccggtg
     9241 gcaagcgcat gctggtcggg gaagtaaacc accacgtcgc ccagcgtgtg cgccgggccg
     9301 ggatggtaga tgcggacttg gtgtccgcca aggtgaatcg tgaccgcacc cgggaaggtg
     9361 atccagctct ggtgagccag cttgccattg ttcatcgccg ccactttctc gcgcgtgaag
     9421 ccggccgaga agatggttgc gcccgagccg atcagcacat ctccgccgct gtggtcagga
     9481 tgatagtgcg tgttgatcac atagcggacc ggcgcctgtg agattttgcg gatggctgtg
     9541 agcagcttgc tggcttcggt ctggttcgcc ccggtgtcca ccaccagaat cccttcgctg
     9601 ctgacgagga aggttgcgtt ggcactggag tcaatctctg agatgtaagc atacagatcg
     9661 ggtccgatct gttgcactcc cgcgaaacaa aaccgtgggc acagcagggc caaagcgaac
     9721 gcccccagcg cgcattgccg cccggttttc ctcatttgca cgccactatg aacattcgtt
     9781 tatacggaaa aagcgatttg ccctgatcgt cgccgggaaa gagcctttca tattcctcca
     9841 ggcagaactg ctcgaattga ttgcgctgaa cgtcgttcgc cagacgcgag agatagggac
     9901 gcatcgccgt cgaacgcatc cagtccagca cggcacgcgg gccatccatg acctgaaaat
     9961 actcggtctc ccagatgttc acgctcctgg cgaacttgcg cagcgcgttg tagtaaaacg
    10021 cagccggctg gatgaagata ttttccgcgg cgtcaccgag cgcgccggcc cagcgcgaat
    10081 cggctccgcc ttttttcatg gcgaggtgag cgggagcctg gaagttgttc ggcatctgta
    10141 tggcaagaat tccccgatca gcaacggcgt taagcaatgc aggaaaaagc ctgccgtgat
    10201 cggggaccca atgcagcgcg gcattgctaa acaccagatc gtatggctca tccggctgcc
    10261 agctctcgat cccactctca atccactgcc attcaggatg cacttcgcgc gcagaatcaa
    10321 gcatcttcgg cgaactatcg agaccggtga tttccgcgtt tggccagcgc tgatgaagtt
    10381 gctcggtact ggtgccggtc ccgcagccga ggtcgatgat cgtctttggc gagttgagat
    10441 cgatctgcgc gatgaggtcg gcggcgggcc gtccgcgctg gcgggagaat ttcaaataaa
    10501 gctcgggatt ccagtcgggc atgttaagga aagattttta ccacaaagga cgcgaaggga
    10561 cgcaaagaac agaaaaacca gccacatagg tcacagagaa acactgagga gcgaatcaga
    10621 aggccgtgaa tgacttgcct caaaatctcc tttgtgtcct ttgttggtaa atgggtttcg
    10681 aacgtgctgt gtgcttcgcg tgtccactgt ggtcagtccg cagcctcaat catcttcacc
    10741 agcgtccttt gcgcaaaagg catatagatc agcgcagcgg tggcggcgag cgcgagaccg
    10801 aagccgatac gatcggaaat cagcagcgga gaaagtgccc agatcatgtc cagcacgaac
    10861 agcgccggga agatgacgcg gaccttctgt cccagcaggt gatagtcgag cgaggtggcg
    10921 ctaattaaat agagtcgcac ggccacgcct acgagtgcgg tgaccagata aaggatgaaa
    10981 gcgatcagtc cggcgctgtg ccacgccatg tcggcggagg catgcaggtt gtccagccgg
    11041 aagagcgccg agaagtagaa gatcagatac atgacctggg cgaggatgaa cagcgtacgg
    11101 gagagttgcc ggctcgcgag cgggagttcg tgctctcccg gcggacgctc ggcttgaggg
    11161 gcatcctgct gcgcagaaat atcagaatgg ctcgccggtg ccggtgaacc actgctttcg
    11221 gccgaaaccc ccggcgaggt ctgcgcgccc ttctgcggag gcgcgggaat ggttacggtt
    11281 tcgagtgcga ctggcgtaga agtgctggcc ggaacgggcg gagtcggcgc ggcaaccgac
    11341 tcaaccgttc ccacaaaccg gtagccgcgc ttcgcaatcg tctcaatgta tttcggcttg
    11401 gaagccgaat cgccaagcac atcgcgcagc ttggccacgg cggtgttcag tccgtggtca
    11461 aagtcaacga aggtatcatc cggccacagg cgctggcaca gctcttcgcg tgtgaccacg
    11521 tcttgcggcc gctccagcag agccaccagc agctggaacg gctgaagctg aagcttcagg
    11581 cgaatgcccc ggcggcgcag ctctgcggca cgcaggtcgg cctcaaagtc atcgaaacgg
    11641 taacgggcaa ccggtggcgg catcaggttc gcgaagcgat atcttaaatc aacgctgcgg
    11701 cgctaattaa aatggagcgc aatggaccac gactcctccc gccgccagca gacacttggc
    11761 cttgccgtca tcgtcgtaat catcctgcta tttctcgctt tgcggcgctg gtggatgctg
    11821 cgatgagtga accgctcctg gtcgtgctgg tagggcccac cgccagcggc aagaccgctc
    11881 tgtcgctcgc gctcgcgaaa aagttttgcg gagaaatcgt gagctgcgac tcggtagcgg
    11941 tttatcgcga gttcgagatc ggcacggcca agccctcacc cgcggagcgg cagcgaatcc
    12001 cgcatcacct gattgacgtg gtcgagccgg aaggccagct cagcgcgggc gattactcgc
    12061 ggctcgcgcg gcaagcgatc cacgaaattg cggcgcgcgg ccacctgccg atcgtagttg
    12121 gtggcaccgg actttatctt cgcgctttgc tcgaaggatt gttcgccgga ccgccacggt
    12181 cggaagagtt gcgctcccga ttgcgagatc gcgcacagga gcgcgggggt gagtatctcc
    12241 accgcatgct tcgaagattc gacccgaaag ctgccgaagc gattcatgct aacgatgttt
    12301 ctaaaatcgt gcgcgcgctc gaagtctcga tctcagcgcg gcagcccatg acggagatgt
    12361 ggcagcaggg ccgggatccc ctgcgcggct ttcgcatcct gcgcttggga ctgaatccga
    12421 atcgcgacga tctttacgca cgcatcaacc agcgagccgc acagatgttc gagcagggcc
    12481 tggtggagga gacaaagagg ctgctggacc gctacggcaa gaagccatgg cctctgggtt
    12541 ctctaggata caagcaggcg cggcagcttc tggcgggcga gttgacacga gagcaggcga
    12601 ttgcggccgc gcagcaggga catcgcaatt acgccaagcg gcagatgaca tggtttcggc
    12661 gggagccgga tgtggaatgg ctgcatggat tcggcgatga tgctgcaatt cagcaatgcg
    12721 ctcgcgatct ggtgcgcgct gccctcgtgg agcagtgaat ctgctcagcg cagatgctgc
    12781 cacaggtaaa aaatcgccaa gccggcgagt gctatcacga ttccaatccc gcgcaacgtt
    12841 cccagttttc tgacccactc gttcatttca ggaaaaactc ccttcctgtg gaaatcgtaa
    12901 atcctcctgc aaccatttat ttttttattg acatcgaaac gctagtaccc caatattttg
    12961 ggtgtacatg gtttggcccc ctacaattag ggccggtcaa gtcaaaggga cccggtttca
    13021 aatccttgaa ggaggaaatg agtcaatggc gaccaagaag aaagctgcga aaaagaaaaa
    13081 gaagtagcca cgtcgcggag ccaagtctcc gtggacaaaa gatcaatcaa gggacaatag
    13141 ttaaaacggg tgttcaatac gaacacccct tttatttttg gcgggaaggt taagatgttg
    13201 cgcacggagg caacaagaat gttttcaaaa tggagagcca cggcatcggc attgatgctg
    13261 gccatgatgg tttccttcgg tctgcccgca catgccgacc gcgaccgcaa ttgtgaacaa
    13321 cacatccgca aggcagagtc gaaattgcag caggccatcc acaagcacgg ggcgcgcagc
    13381 cgccaggcag aacagcgccg ccgcgaactg gaagaagtca gggagcgttg ccgtcatcgg
    13441 taaattgccg cttcatgtaa ccagagacgc ggctcacccg cgtctcttga aagtctctgg
    13501 ttggtctccg caatggttgt gcctgtccgc tcttacatgc ttcaatgaac gagcgtgcct
    13561 cgatccacaa aaatttcctg tttattgctg ctgccgcttt tcctcctagg gctctttgaa
    13621 ctgcaggggc agacttcatc agccacggcg cagcctcagg gttcgcccag cgctcaacaa
    13681 cagagcgccc agccggcgca agctccgtct ggctccggcg gcgaagacat tattcccttc
    13741 ctgaaccagt tgatcgtctg gtaccgccag cttgcaagcc aacaacagct tgcgaccgag
    13801 cccagtgacg ttctttttct gaacgacaac cgccagcttg ccgaccagat tgtgaagctg
    13861 ggatttgatt atgcgcgggc acgcgcgcag gtcatcgcat cgcagacggc gtcggcggcg
    13921 ccggaccaga acggtggcca gtcgcagtac cagcgtattg tgcaggcggc cgcgcgcgct
    13981 gaccagcagg taaagaactc gcagcaggag gttgcgcggc tacagcagaa gctggaaacc
    14041 gccacagcaa agcagcgtcg cgacctgctg gcacagatcg cggagaccca gagcgaactc
    14101 gacttcgccg aagcgcgccg cgacagcctg cgcgggatgg tacagttcgc caccggagca
    14161 accgcgggcg gtaccggccc cggaaatctg gcggcgcaaa ttgaagagct ggcgcgcgcc
    14221 gttcccgcgg ctactgtggc gggcaaggag gccgccgacg ctgccaggca gaccaacgcg
    14281 gccaacacag ccgccgccac cgcaaaggag cgcaaagagg agcccacggg tatgctgggg
    14341 ctgatcagcg acctcttcga tctgcggcgc aaactgcatg ccgttgacga caacatccgg
    14401 cagaccgagc agcttacaca ggcttctcgc gccttgcgca ctccgctgac caccaccatc
    14461 cgcgagttga cgcagaaagg cgaccagctt gccgcccagc cgccggcaac agatccggca
    14521 gtgttggcgc agcagcgcaa agacctggat gccatgacgc agcagtacaa gcagctctct
    14581 gccagcctgc tgccgctggg caagcagaat atcctgctgg acgtttacaa gcgcagctcc
    14641 accaactggc gcaacagcgt agagagccaa taccaggctg agctcaaatc cctgatcctg
    14701 cgattgggcg ggctcgcggt gattctggcg gtcatcctgg gggtttctga tctgtggaag
    14761 cgcgccacct tccgctatgt caccgatcct cggcggcgtt atcagttcct gctgctgcgc
    14821 cgcatcctga tgtgggtagt gattctcatc gtggtggtga tcgcctttgc cagtgaactg
    14881 gggaccatca ctacctttgc gggcttgatg acggccggca tcgccgtggc gctgcaaaac
    14941 gtgattctct ccgtcgccgg ctacttcttc ctgatcggaa agtacggcgt gcgcgtaggc
    15001 gaccgtgtgc aggtggcagg cattaccggc gacgtagtgg acatcggatt ggtgcggctg
    15061 cacctgatgg aagtcactgg aggctcagct ccacggccca ccggacgtgt ggtggtcttc
    15121 tccaacgcgg tcgtcttcca ggccaatgcg ggattgttca aacaaattcc gggcaccagc
    15181 tttgtgtggc atgaagtgaa agtcacgctg gcgccggaag gcagctaccg cgaggtggaa
    15241 aagcggatgc ttgaggcggt gaataaagtt tttgccgact atcgcgaccg catggagacg
    15301 caacggctgg gcatggagcg cgcgctcagc accgtacgaa tttccaactt tgctccggag
    15361 agccacctgc acctggccag cggcggcctg gcggtgatca tccggtaccc ggtagagatc
    15421 agcaatgcgc cggaaattga cgatcgcgtc acgcgcgagc tcctggatgc catcgagcgc
    15481 gagcctcgtc tgcgtctgct gggctcggcg ggacctgaga ttaaggtgga agagcagccg
    15541 gcgtgaaaca agtaattagc aattagtaaa tagcaattag ccgttccacg tcgacgccca
    15601 actgcgacaa ctacattacc tgaacacgtt cgctccccat tgaaaacaca accagttccg
    15661 gcgagtgaca ggcatcacat ccaagctgtg caacgctgcc ggaagatggc tggtacatca
    15721 gcgtcttgta tagagacgcg tttgggagga atggggcccg gccatcctcg gcggggctcc
    15781 attgtaagga gcctgggatc caatgaagaa ccgcccccga gtcaccatcg atggaaacga
    15841 agctgcagcc tgggtcgccc ataagatcaa tgaggtcata gcgatttatc cgatcacccc
    15901 ctcttccgcc atgggcgagt ggtctgacca gtggtcgtcc gagggaaaaa cgaatatctg
    15961 gggtacggta ccgcaggtga ttgaaatgca gagcgaagcc ggagcggccg gagctttgca
    16021 cggggccttg cagggtggcg cgctggccac cacttttaca tcggcccagg gcctgctgct
    16081 gatgatcccc aacatgtaca agatcgccgg tgaactcacg ccggcggtga ttcacgtggc
    16141 agcgcggtca ctcgccactc acgccctttc cattttcggc gatcatcagg atgtgatggc
    16201 tgtccggcag acaggctggg gcatgctggc ttcgaattcc gtgcaggaag taatggattt
    16261 tgccctgatc tcgcaggcgg cctcaatgga tgcgcggctg ccgttcgtac atttctttga
    16321 cgggttccgg acttcgcacg agattgccaa ggtggaacag ctgcagccgg aagatctggc
    16381 ggcgatgatt accccgcaga tggtggagcg gcatcgccgg cgcgctcttt caccggagca
    16441 tccctttgtg cgcggcacgg cccagaaccc tgacgtttat ttccaatcgc gtgaagccgc
    16501 caatccgtac tacctggccg cgcctcttat cgtgcaggac acgatggacc agttcgccca
    16561 gatcaccgga cggcaatacc acctgttcga ttacgtgggg gcgcccgatg ccgagagcgt
    16621 gatcatcatt atgggttccg gcgctgaggt ggtggaagag actcttcaga agctgaacgc
    16681 gcggggaggc aagtacggcc tcatgaaagt gcggctatac cggccattct ccgtagagca
    16741 cttcatcaaa gcgttgccct ccacggtgga agccattgcc gtgctggacc gcaccaaaga
    16801 gccgggtgca atcggcgaac cgctgtatgc cgacgttgtc acggcgctga gtgaggccga
    16861 atcggccgat acgcatctgg tgcagcctct gccgaaagtg atcggcggac gctatggcct
    16921 ttcttccaaa gagttcaccc cggccatggt gaaagccatt tacgaggaat tggagaaaga
    16981 gcgcagcaag aagcacttca ccatcggcat ttatgacgat gtgacgcata ccagcgtcga
    17041 tttcgatccc gagttttcaa ccgaagatcc tgagacggta cgcgcgttgt tttatggatt
    17101 gggcgctgac ggcaccgtgg gagccaacaa gaattccatc aagatcattg gcgaggatac
    17161 ggagctctac gcgcagggct actttgttta cgactcgaag aaatccggct cactcaccat
    17221 ttcccacctg cgcttcgggc ccaagccgat tcgctcgagc tatctgatca cccaggcaaa
    17281 ttttgtcgcc tgccaccagt tcgctttcct ggagagagtt gacgttctca agtacgccga
    17341 accaggcgcc actttcctgc tgaattctct ttacggtgcg gatgacgtct gggcgaacct
    17401 gcccagcgcc atccagcagg agatcatcgc gaagcagctg aagttttatg tgatcgatgg
    17461 ctataaagtg gcgaaagaag ccggcatggg cggacgcatc aacaccatca tgcaaacctg
    17521 cttcttcgcc atcagcaacg tgctgccgcg cgagcaggca attgacgcga ttaaacgggc
    17581 gatccggaag acctatatca agcgcggcga agccgtggtg cagaagaact ttgacgccgt
    17641 ggaccgcacg ctgcacaacc tgtttgaagt gaaggtgcca gaaacagtca ccagcaagag
    17701 ccggccatat caggtggtgc cggagtttgc gccggaattc gtgcagcgtg tcaccggccc
    17761 aatcatccag ggcaacggcg acctgctgcc cgtgagcgca ctgccggtgg atggcaccta
    17821 tccgagcggc acttcacagt gggaaaaaag aaacatcgcg ctggaaattc cggcgtggga
    17881 caccgagcta tgcatccagt gcgggaagtg cgtgctggtc tgtccgcatt ctgtgattcg
    17941 cgccaagctc tacgaatcag acaagctcaa agctgcgccg gctgagttcc tctccgctcc
    18001 ggcacgctgg aaagacatgg ggcacatgaa gtattcgctc caggtctcgc cggaagactg
    18061 caccggctgc tcgctttgcg tggaggtctg cccggccaag agcaagactg atccggcgca
    18121 tcgcgcggtc aacatggttc cgcagccgcc cgtgcgcgag cgggaaaaga agaactggga
    18181 tttcttcctc agcctgccgg aattcgatcg cgagaaggtc tcgttcagcc aggtgaaaga
    18241 cgttcaacta cttcaaccat tgttcgaatt ctccggagca tgctccggtt gcggcgagac
    18301 gccctacctg aagctgctct cacagttgtt cggcgaccgg acggtaatcg ccaacgccac
    18361 tggctgctcg tcaatctacg gcggcaacct gccgactaca ccctacacgt tcaacaaaga
    18421 tggacgcggc atagcctggg ccaactcgct gtttgaagac aatgccgagt tcggtctggg
    18481 gatccatctg gcgcaggaaa agcaggcgga gcacgcgcgc gcgttgctcg cgcgactcgc
    18541 gtcactcttc ggcgaagaac tcacgcgcaa catccttgat gcagaccagc acaacgaagc
    18601 cggcatccac gcccagcgtg agcgcgtgaa cttcctgcgc gagaagctgg agccgctgcg
    18661 caaagacaat tctgaagtac gcgaactgct gagcattgcc gatgcgctgg tcaagcgcgc
    18721 tacctggatt gtcggtggcg atggatgggc ctatgacatc ggctacggcg ggctcgacca
    18781 tgttctggcc tccggtcgca acgtgaacat cctggtactg gacagcgagg tttattccaa
    18841 caccggaggc caggcctcca agtcaacgcc gcgtggtgcg gttgccaagt tcgcctcagg
    18901 tggaaagccg ggggcaaaga aagacttggc gttgatggcc atggcctatg gcaacgttta
    18961 tgtcgcgagg gtggcgatgg gcgctggaga tatgcagacg ctgaaggcat tcaatgaagc
    19021 tgaagcctat ccgggaacgt ccatcatcat cgcctacgct ccctgtatcg cgcacggcat
    19081 tgacctggtg cacagccttg atcagcagaa gctggcggtc caatccgggc attggccact
    19141 cttccggttt aacccggcgc tggccagtga aggcaaacac ccgatgcagc tggattcgaa
    19201 agcgccgtcc gtaccgctgg aaaagtatct ctataatgag acccgctaca cgtcattgca
    19261 gcaggcgcat cccgaggaag cgaagcagtt gctggaactg gcgcagcatg acgttatcga
    19321 acgctggaag atgtacgaga cgtttgccaa catgtcgcct gacggcaagg tggaattgcc
    19381 cgaagcggcg aaggcgaagt agaagcacag tatcataatc aagcaggaaa cactggggtc
    19441 tgacgagccg gtcagtgctc aagtgcgtcc gtatcggagg gccgagtgaa gaccgttttc
    19501 gtgattggcg cagggccggc aggattgttt gcagcacaga agattgccca ggcagggcac
    19561 cagaccatca tcttcaatcg cgacatcaag cccggcggcc tggccgaata cgggatttat
    19621 cccaccaagg acaagatgaa gatcgggttg cgcaagcagt ttgcgaaagt gctgagcctc
    19681 cccaacgtgc attacttcgg gcacgttccc ataagcaacg attccgccgt gacgatctct
    19741 gagttgcgtg actggggacc ttccgccatt gtgttctccg tgggtgcgca aggcaccaag
    19801 aagctggggc tccccggcga gaccgccggc ggtgtctatg cagccaagga cttcgtttac
    19861 cactacaacc tgctgccgcc atacacctct cacaatttct ccacgggcaa gcgggtggcg
    19921 attgttggca tgggcaacgt gatggtggac attgcgcgat ggctgctgct ggacgcaccg
    19981 gttaagacgg ccgaagaagt ggtcgtcgtg gcgcgacgcg gaccgttcga agccaagttc
    20041 gaccagaaag agttcgatca catcgaacaa tttctggacc gcgcggcatt cgatcaagag
    20101 ctggcgagga tccagccgca gcttgctgcg gttggccagg acatcagcaa gctgaaagac
    20161 gagacgttcc cgatcctcgg caagccggcg gagccggtta gcggggcgcg gctgcgcttt
    20221 cggtttctct gccagccaaa agaaatcaag gctgatccga gtggccggat caataagctg
    20281 ttggtgactg agaacgttct ggcggagcgt gaaggttcca tctcctgcaa gtcaacggac
    20341 aagacagccg aactcgatgt tgacaccatg attttcgcta tcggcgacgt agccgatccg
    20401 agcctgggag ttccctacaa tcgcgatgct tacgtaacga atcccaacgt cggggaagac
    20461 cccaagtgct ctgcggctta tcagctctat gatcctgcag agaagaaagt attggatgga
    20521 atgtacgcgg tgggctgggc gcggagagcg agtgatggac tggtcggtat tgcccgccac
    20581 gacggcgaag ttggcgcagc tcacgttttg aaatacctgg agacagctcc ggatgggaaa
    20641 tccatttcgc cggatcagat tcgccggcaa ctcgagcgca aaaatctcaa ggtcatcgac
    20701 aaggctgacc tggaatgcct gggccgcgtg gaagagaaag ttgcgaaaga gcggagcatc
    20761 gcctggttca agttcgataa ggatgaagag atgctcatcg cgatcgaatc agaaaaggcc
    20821 aaagcctgat cgaaacctca actcgactga ttgaccgata atgaaaaagg gcgcaaagtt
    20881 tcaacctttg tgcccttctt gtttgtataa gcccatctga aacaggccgc ccgctctggg
    20941 tttggagcgc agattacgag cggccttggt gggcaacttt ttggttaacg tccgcgaccg
    21001 ccacggcctc cacgtccacc gccgccggag ataccggatt cagctccacc gccgccgccc
    21061 cggagtccgc tgccgccttt accgcttcca ccggagccgc cgccgccttt caggccgctg
    21121 ccgccggaac cagaaccacc gcctgagccg cttccgccac cggaaccgga gccgccacct
    21181 gagccgctgc cgccgcccga accggagccg ccgttgccac cgttgccggt tccgccggtg
    21241 aaggccgtcg caagcacttc atctgcggga acaaaggtga cgccctgcgg agtcgggatt
    21301 ggagtgggca gaggagccag gaacggcgag cctgcaccat tcatttccca gcgcagcaac
    21361 atggcattgt cttcatgcac cgtgttgtgg cagtgctcca tgaacatgcc gccccagtca
    21421 cggaactgca tggtcagggt cacgcttcca cccggacgca gacgatacac atctttgcgg
    21481 cccttttccc acgccggaac tgcagacgcg ctgccgttgc gggcgaggat ttggccttct
    21541 tcaaagtgga tgtggatcgg atggtcccag ccgccgccgc cgttctggag tgtccagact
    21601 tcgcgggtgc cgtatttggg agccgccgat acgcgaccga agctggccgc gcgcatcgaa
    21661 ccgccatcgg tggagatacc ccacggtcca gagaaggagg ttgcgccgtc actgatgttc
    21721 tgtgaggcgc cgctgccgaa cacaaacgtg cgctctgccg agaccggaat gtttgagaga
    21781 tccgggttcg gaatcatctg tgccggaacc tggctctgat cagcctgagc cgggtcacgc
    21841 acaatccgga attccaggaa cttgccgacg cacgggtccg ccgatgttcc ggagagcgcc
    21901 tgcgccagag tcagatccgc cgccggcttc tttccgtccg agtgctggca gaggttcacc
    21961 aaccagagct tgtcgccgat cgagtagcgc gagaaatcga tcaccacgtc atagcgttcg
    22021 gcgatgccct gctcatcgag ctgagtcagc gcgactggcg agggcagcag gttgccgtcg
    22081 ttggcaatct ggatcatctg cgagccatcg cttagcgcga tcttgaagaa gcgcgagacg
    22141 ctggcgttca ggatgcggaa gcgatacttg cgacgctcca cttcgaaata tggcttatag
    22201 gcgaggttga cggtcattac gtcgcccagg aagccatcga agttgaagat gtcgaagtgc
    22261 agctgcccgc tggaatcgaa cgccttgtcg gcgatcatca ggttgacgtc gtaatccagg
    22321 ttgccccagg actttgcagt accggagggc aggcgcaggt tcacgccatc attgatctct
    22381 tcgttgccgc gatccagcgc gctgtagatg ttgaacatcg cagcgttgcc tttgtacacg
    22441 ttctggctgg taaagctgaa catgtgatcg tggaaccagt gggtcgacat ggtttcacgc
    22501 cagtcgccgg ccaccttgtt gatgccgcca ttatcggccg ggcttccggc gcgaggatca
    22561 gtcgcgtccg tattgatgct gttgcagccc gccagaacaa tcggccagtg atagtcgtag
    22621 aactgtccgg ggaagaagta cgcgccggta aagccgtcat tctccgcgcc gtggtggccg
    22681 ttgtgctcgt gggtggagat cgtgtgccgt ccgaagccac cgttctgcgt tacgtcggca
    22741 ggcagcttgt tgtgatggcg gaacaggatc ggctcaccat agcgtccctg aaccagcttg
    22801 ggaggaatgg tgccgttgaa ggtccacacc gagagcggac tctgggtggg catgctggga
    22861 tggaacttga gcggaatcga atcgctggga ttgatgccgg agttcaggga agaatccacg
    22921 cccgggttgt aaaccgtgtt ggtggtcgcg cccatctggc tggcttccac ggaaatctgc
    22981 ggcatatgcg tggcaaactg ctggtgcgac cacaccggcc ccggcggacg tccttcaatc
    23041 gggccaaagc cgccgcccag aacggggtcc accgcctgga gagtctggtt ggattctgcc
    23101 gttggagccg gcgtcaagtc gccgcccatc gggttggttc cgcgctgcag cacgtcaaag
    23161 cggggcattg cctgcgtgaa cggctgcgcg ccaaagagcg ggctgcgtgg gatcccggtt
    23221 gggttgctgc tggtatcaat cccaccatca ccgccgcggc cgccaccact gggaccgcct
    23281 ttgctggcgt aggctgattg cacaaacggg ttcaggccct ggatcggcgc cagcaatccg
    23341 gcgcttgaga tcaggcccca cttgaccaga tcacgacggg agactttccc ctgtgaaaat
    23401 gcttttacga tttcggcacg attcttacgc gcttcttctg cttctctctt gcgcgcacgg
    23461 gaagcgtctt ccggaagata gataaagctc atttcgaact gccctcctgc aatccgatcc
    23521 ggcgcgggag cccaaaggag ccgagcggct tgcaccggcg atttaacgcg gttgcgaatc
    23581 aaactgcagg aaagagaatg ccgcctcgac attaagcaat catgagatag acattaactc
    23641 tgcttaagat ttgaaaactg tttttggcat ttcgtcttct ttcttaaagt cataagaatt
    23701 attgcaagta cccggatttg ttcggcttac tgacaaaagt ctccggaagt cctacccacc
    23761 caggccattc tgagtacctc tttcagcaat agtggaaagt tattaatgat gtcctttcgg
    23821 ccatggtaca cagggccgtg taccgctttc cttcca
//
LOCUS       DASQYP010000221         6109 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_307623, whole genome shotgun sequence.
ACCESSION   DASQYP010000221 DASQYP010000000
VERSION     DASQYP010000221.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 6109)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6109)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6109
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_307623"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..220)
                     /locus_tag="VE783_07195"
     CDS             complement(<1..220)
                     /locus_tag="VE783_07195"
                     /inference="COORDINATES: protein motif:HMM:TIGR02532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system protein"
                     /protein_id="HYX53220.1"
                     /translation="MLVKGKLKLGRNYQGGFTLMEMIVVITILLILMAAAVPIVRVSV
                     KRGREVELRRDLWEMRSAIDRYKDAADKN"
     gene            complement(227..2548)
                     /locus_tag="VE783_07200"
     CDS             complement(227..2548)
                     /locus_tag="VE783_07200"
                     /inference="COORDINATES: protein motif:HMM:NF012485.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030246 - carbohydrate binding [Evidence
                     IEA];
                     GO_process: GO:0000272 - polysaccharide catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cohesin domain-containing protein"
                     /protein_id="HYX53221.1"
                     /translation="MPAADSAKTLHNKGQKAEDAGDYETAYDYYVKAYRLEPANMKYR
                     VPYERMRFLAAASKVHRGQKLREQGKLDEALALFQQAAQIDPSNDLAAQEIRRTQQMM
                     QKAQVPNKPQAREEEDPLKRRLENATGPAELGTLPNVPLDALEMTDDSKVLYETIGKL
                     GKINVLFDPDYTSRRLTIHLQKVSLQEALDILALESRTFWRPVTSNTIFVAQDTQAKR
                     RELEQNVVKTFYLGNVSGPTDLQDIVNAIRTVLEVQRIQQIPSQSAIVIKGTPDQLAL
                     AEKMIDDIDKSKPEVIVDVIVAQVRRDKLRDLGITPPQNATIALQNTNTTGTTTTGGT
                     TTGTGGGGVLNFNDLQHLNSTNYAVTIDPVKVVALFNDSDARILQSPRVRATDNEKAQ
                     LKIADKIPIATGSFGTPVGIGTATGAVGVNTQFTYTDVGVIMEITPRVHPDGQVTLKT
                     VMEISNQSNTVIIGGIQQPVISTRRVEHTIRLADGEVNLMGGIMEQQDTITRSGTPFL
                     GQIPLLHYLFSEEKKERITNEIVFLLIPHIVRSQELNDLNRRAFDVGTGQGIDLHIAG
                     RQTVQPTVASAPAPAPAPAPASTMQANPAAAAQPRPTVTQPSAQPPATHPASQALPAM
                     STPSSTSNAVPGATMLKLDPTSFSQQQGSSFTVNVMMAHGQDIASVPIQISYDPRILQ
                     FVNVSNGDFLARDGQPVALVHRDDPSAGKLQVTAQRPPGSSGVTGEGTVFSLVFTAKT
                     KGTGNVSISVPGARNSQNQPLDVLGSQAAVTVN"
     gene            2803..3330
                     /gene="smpB"
                     /locus_tag="VE783_07205"
     CDS             2803..3330
                     /gene="smpB"
                     /locus_tag="VE783_07205"
                     /inference="COORDINATES: protein motif:HMM:NF003843.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SsrA-binding protein SmpB"
                     /protein_id="HYX53222.1"
                     /translation="MARHTTHQTEPNKPKNPKRDPIASGERDATVNRAASHNYFLEDR
                     TETGIVLSGSEVKSVRSGRANLKDAYALIKDEELWLLNAHIGAYENAGYAHHAPLRTR
                     KLLVHKEELRKLKAKTQQRGYTLVPTRMYFKNGRIKCEIALAKGKQSWDKRETERRRT
                     ADREAREAMARARKS"
     gene            3396..4895
                     /locus_tag="VE783_07210"
     CDS             3396..4895
                     /locus_tag="VE783_07210"
                     /EC_number="3.4.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF002073.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0070006 - metalloaminopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="leucyl aminopeptidase"
                     /protein_id="HYX53223.1"
                     /translation="MEIRLLTANLPDVETECLVVFALDHGDKQKPAPQLAVKDAAAEK
                     AIGDLVASSEITGKPFETTLLHRPQGLKAKRLLVVGCGKAKSFSHVEARKAAGSALRA
                     LKPKMIKSCAIAVPELGSGAEEAVRSLVEGCYVADFDPDTYRSDRKDLSMKEVSIVAP
                     AGSDQSGVQRALDQGRIIGESQNFTRELVNEPSNRLTPTMLADRAKKMCETVGLKCEV
                     YGPDKIKEMKMGAFWSVAQGSDEEPRLIVMRYEPQGAPEKPVLGLIGKGITFDTGGIS
                     IKPADGMEKMKYDMAGGAAMIGAMRAIAQLKPKVKVISIVCATENMPSGKAQKPGDVQ
                     IAMSGKAIEIINTDAEGRLVLADGLHYARTLGCTHLIDAATLTGACVVALGHVNAGVF
                     ANDEGAYQHFTRALERSGEKFWRLPVDGEYLDQIRSSIADIMNTGGRWGGASTAAAFL
                     KEFVEDTPWLHLDIAGTAWIEDNKSWIAKGPSGIGVRSIVEWVKTFASS"
     gene            complement(4954..6048)
                     /locus_tag="VE783_07215"
     CDS             complement(4954..6048)
                     /locus_tag="VE783_07215"
                     /inference="COORDINATES: protein motif:HMM:NF014027.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="deoxyhypusine synthase family protein"
                     /protein_id="HYX53224.1"
                     /translation="MAKQKHQGSGIDRKLHDPVSDKLSPVFPLDLSKVKNVSELVRAM
                     ADTAFTGRQLGEAVDVLEAMARDKDCFVVMTLAGAMTVAKQGLVICDLIDRGLVNAVV
                     STGALMAHGLVEAAGMNHYRYDPRMNDVELYEAGYNRVYDTLEPETNLDSVELVMEEV
                     LGKWDPQQTMCSWKLNRAIGEHLKRHAKGRGILKSAFQQGVPVFVPAFTDSELGLDVA
                     LTNRMRARKGQPQLRYDPFLDLNHFAETLLAQKKIGIFTIGGGVPRNWAQQFGPYCEL
                     RVRRAGEEVELKRYHYGVRVCPEPVHWGGLSGSPYSEAISWGKFVPPHEGGKFGEVFV
                     DATVGLPIMCAALFERLGKSYKKPVLKQLS"
BASE COUNT         1312 a         1764 c         1723 g         1310 t
ORIGIN      
        1 cgtttttgtc ggctgcgtct ttatagcgat caatcgcgct gcgcatctcc caaaggtcgc
       61 gtcgcaactc aacctcgcgc ccacgcttta cgctgacgcg cacgatcggt actgccgctg
      121 ccatcaggat gagcaggatc gtgattacca cgatcatctc catcagcgtg aatccaccct
      181 gatagttcct gcccagcttc aactttccct ttaccaacat ctgttactag tttaccgtta
      241 ctgctgcctg cgatcccagc acgtctagtg gctggttctg gctgttgcgg gcgcccggca
      301 cgctgatgga aacgttgcct gttccctttg ttttcgccgt aaataccaga ctgaagacgg
      361 ttccttcgcc cgtgacgccg ctgcttcccg gcggacgctg cgccgtaacc tgaagctttc
      421 cggcagacgg atcatcgcga tgcacgagcg ctaccggctg tccgtcacgc gccaggaagt
      481 ctccgttaga gacattcacg aattgcagaa ttcgcggatc gtagctgatc tgaataggca
      541 cggaagcaat gtcctgtccg tgcgccatca tcacgttcac tgtaaagctg cttccctgtt
      601 gctgcgagaa ggaggtggga tccagtttaa gcatggttgc gccgggcacc gcattgcttg
      661 tgctcgaagg cgtactcatg gccggcaaag cctgagaagc tgggtgcgtt gcgggtggct
      721 gcgcactcgg ttgggttacc gttggacgcg gctgcgcagc ggcggccggg tttgcctgca
      781 tggttgaggc tggagccggc gctggggctg gagccggcgc tgaggcaacg gttggctgga
      841 ctgtctgcct gcccgcaatg tgcagatcaa ttccctggcc ggtacctacg tcgaacgcgc
      901 gacgattgag atcgttaagt tcctggctcc gcacaatatg cgggatgagc aggaacacaa
      961 tctcattggt gatgcgctct tttttttctt cgctgaaaag gtagtgcagc agcggaatct
     1021 ggcccagaaa cggcgtaccg ctgcgggtga tcgtatcctg ctgctccatg atgccgccca
     1081 tcaggttcac ttcgccatcg gccagccgga tcgtgtgctc cacgcgccgc gtgctgatca
     1141 ccggctgttg aatgccgccg atgatcacag tattgctctg gttggagatt tccatcaccg
     1201 tcttgagcgt cacctggccg tcagggtgga cgcgcggcgt aatttccatg atcacgccga
     1261 catcggtata ggtgaattgc gtgttcacgc cgactgcgcc cgtcgcggta ccgataccta
     1321 ccggggttcc gaatgaaccg gtagcgatcg gaattttgtc ggcgatcttc agctgtgcct
     1381 tttcgttgtc tgtggcgcgg acacgcgggc tttgcaggat gcgggcatcg ctgtcgttga
     1441 acagtgccac cactttcacg ggatcaatcg tgacggcgta attggtcgag ttcaggtgct
     1501 ggagatcgtt gaagttcagc actcccccgc cacccgtgcc ggtggtggta ccaccggtag
     1561 tggttgtgcc ggtggtgttc gtattctgca aagcgatcgt ggcattttgc ggtggagtaa
     1621 tacccaggtc gcgcagctta tcgcgccgca cctgcgccac aatgacatcg acgatcacct
     1681 caggcttgga cttgtcgatg tcgtcgatca tcttttccgc cagcgcaagc tggtccggcg
     1741 ttcccttgat cacaatagcg ctctgggaag gaatctgctg gatgcgctgc acttccagca
     1801 cggtacggat tgcgttgacg atgtcctgaa ggtcggtggg accggagacg ttgccgagat
     1861 aaaaagtctt tacgacgttc tgctccagtt cgcggcgctt ggcctgcgta tcctgggcaa
     1921 cgaagatagt gttcgaagtt acgggacgcc agaaggtacg cgactcaagc gcgagaatgt
     1981 ccaacgcttc ctgcaaactc accttctgca gatggatcgt gaggcggcgg gaagtgtaat
     2041 ccggatcaaa gagaacattg atcttcccca gtttgccgat ggtctcgtaa agcaccttgg
     2101 aatcgtcggt catttccagg gcgtcgagag gaacattcgg gagggttcca agctctgccg
     2161 gcccagtcgc gttctcaagt cgcctcttga ggggatcttc ttcttccctg gcctggggct
     2221 tgttcggcac ctgcgccttc tgcatcatct gctgggtacg gcggatttcc tgggcggcca
     2281 gatcgttgct gggatcaatc tgcgctgcct gctgaaaaag cgccagcgcc tcgtccagct
     2341 ttccctgctc gcgcaacttc tgcccgcgat ggaccttgga agcggccgcc aaaaaccgca
     2401 tccgctcata gggcacccgg tacttcatgt tggccggttc aaggcggtaa gcctttacgt
     2461 aatagtcata agccgtctcg tagtcgcctg catcctccgc cttttggccc ttgttatgaa
     2521 gagtcttggc cgaatcggcc gccggcatgc ttgccgttaa aattaaaaaa cacaacaata
     2581 tttgggcagt tctcctcata cgctcctgct cattccgaga ccgctaactc cttcatttat
     2641 ggggattttc gccgaaggat tggcttattc ggggtaccgg aaatagactt ttacgaatcg
     2701 ccagattata cactgacttt cctgttcatc agaacgactt tagtaaccag cttttgcgct
     2761 gtgttagcat aaaaattttg ctggaagcag cagaaagctg ccatggcccg ccacaccact
     2821 catcagactg agcccaacaa gcccaaaaat ccgaagcgcg atcccatcgc ctccggcgag
     2881 cgcgatgcca cggtcaatcg ggcagcgagc cacaactact ttctcgagga ccgaaccgag
     2941 acgggaatcg tcttgagcgg gtcagaagtg aaaagcgtgc gctccggtcg cgcaaacctg
     3001 aaagacgctt atgcccttat aaaagacgaa gaactatggc tcctgaacgc gcatattgga
     3061 gcatatgaga acgctggata tgcccaccac gcgcccctgc gcacgagaaa actgctcgtc
     3121 cataaggaag agttgcgcaa attaaaggca aaaacccagc aacgcggcta caccctggtt
     3181 cccacacgca tgtacttcaa gaatggcagg atcaagtgtg aaatcgccct tgcaaagggt
     3241 aagcaatcct gggacaagcg tgagactgag cgccgccgta cggccgaccg cgaagcgcgg
     3301 gaggccatgg cccgggccag aaagagttag ttggactgca tttcaggtct caaagagtta
     3361 gaagttctaa caaatcagga gcaataaacg ccattatgga aatacgactc ctcaccgcca
     3421 atctgcccga cgtggaaacc gaatgcctgg tcgtcttcgc ccttgatcat ggagacaaac
     3481 agaaaccggc gcctcaattg gccgtaaaag acgctgctgc ggaaaaagcg attggcgacc
     3541 ttgtcgcgag cagtgaaata accggcaagc catttgagac cactcttctt catcgcccgc
     3601 agggactgaa ggcgaagcgg ctgctggttg ttggttgcgg caaggccaag agcttttccc
     3661 acgtggaagc cagaaaggcg gcaggctcgg ctctgcgtgc gctcaaaccg aagatgatca
     3721 agagctgtgc aatagctgtt cctgaactcg gctccggcgc ggaggaagcg gtccgctctt
     3781 tggtggaagg ctgctatgtt gccgatttcg atcccgacac ctaccgtagt gatcgcaaag
     3841 acctgagcat gaaagaagtc agcattgttg ctccggcagg ctcggatcaa tcaggggtgc
     3901 agcgcgcgct cgaccagggc agaatcatag gcgaatccca gaacttcacc cgcgaactgg
     3961 tcaacgagcc cagtaaccgg ctcacaccca ccatgctggc cgatcgggcc aaaaagatgt
     4021 gtgaaaccgt cggcctgaag tgcgaggtct atggcccgga caaaatcaaa gagatgaaga
     4081 tgggcgcctt ctggagtgtg gcccagggct ccgatgaaga gccgcgcctg atcgtgatgc
     4141 gctatgaacc gcagggggcg ccggaaaagc ccgtgctcgg cctcatcggc aagggcataa
     4201 cgtttgatac aggcgggatt tctatcaagc ctgctgacgg catggagaag atgaagtatg
     4261 acatggcagg cggcgcagcc atgatcggag ccatgcgcgc cattgctcaa ctcaagccta
     4321 aggtgaaggt gatctccatc gtctgtgcca cggaaaacat gcccagcggc aaagcgcaga
     4381 agcctggaga cgtacagatc gccatgtccg gcaaggctat tgagatcatc aacaccgatg
     4441 ctgaaggacg gctcgtactg gccgatggcc tgcattatgc gcgaactctc ggctgtactc
     4501 acctgatcga tgcagccacc cttaccggcg cctgcgtggt tgcactggga cacgtgaacg
     4561 ccggagtctt tgccaacgat gaaggcgcct accagcactt cacccgcgcc ctggagcgtt
     4621 ccggcgaaaa attctggcgg ctccctgtgg acggcgagta cctcgatcag attcgctcca
     4681 gcattgccga catcatgaac accggcggac ggtggggtgg ggcgagcact gctgcagcgt
     4741 tcctgaagga gttcgtggaa gacacaccat ggctgcatct cgatatcgcc ggaacagcct
     4801 ggattgaaga caacaagagc tggatcgcca aaggtccgtc aggcattggc gtccgcagta
     4861 tcgttgaatg ggtgaagacg ttcgctagct cttagcggca gcttgaagcg gagagatatc
     4921 tgagcgcagc atcagattgc tgcgctctct ttttcacgaa agctgcttca gcaccggctt
     4981 cttgtagctc ttacccaacc gctcaaatag cgctgcgcac atgattggca gcccgactgt
     5041 cgcgtccacg aagacctcgc caaatttccc gccctcatgc ggaggaacaa acttgcccca
     5101 ggagatcgct tcagaatacg gcgagcctga aagcccgccc cagtgcaccg gctcagggca
     5161 gacgcgcacg ccgtagtggt agcgcttgag ttccacttct tctcccgcgc gacggacacg
     5221 cagctcgcaa tatgggccaa attgctgcgc ccagttccgc ggcacgccac cgccgatagt
     5281 gaagattcca atttttttct gcgcgagcaa tgtctcggca aaatgattca ggtccagaaa
     5341 aggatcgtag cgcagctgcg gctggccttt gcgggcccgc atcctattgg tcagcgccac
     5401 atccagtcca agctcggaat cagtaaaagc gggtacaaac acgggaacgc cctgctggaa
     5461 cgccgacttc aaaatcccac ggcctttggc gtgccgcttc aggtgctcgc caattgcccg
     5521 attcagcttc catgagcaca tggtctgctg cgggtcccac ttacccaaaa cctcttccat
     5581 taccaattcc acgctatcga gatttgtctc aggctccagg gtgtcataaa cgcggttata
     5641 tccggcctcg tacagttcca catcattcat ccgcggatcg taccggtagt gattcatgcc
     5701 ggcggcctcc accaggccgt gcgccatgag ggcgccggtg gagactacag cgttcaccag
     5761 gcctcgatcg atcaggtcgc agatgaccaa cccctgcttg gccacggtca tcgctccagc
     5821 aagcgtcatc accacgaagc aatctttgtc gcgggccatg gcctcgagca cgtctaccgc
     5881 ttccccaagt tggcggccag tgaatgccgt atccgccatg gcgcgcacca gttcgcttac
     5941 gttctttacc ttggaaagat cgagcgggaa aaccggtgaa agtttgtcgc ttacaggatc
     6001 atgaagcttg cggtcaatgc cggagccctg gtgcttctgc ttggccaatt cctcacctca
     6061 aaaactttag tcgcgaagaa aaaagctaat tgctgcaggc gtgaacgtc
//
LOCUS       DASQYP010000222         9584 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_183632, whole genome shotgun sequence.
ACCESSION   DASQYP010000222 DASQYP010000000
VERSION     DASQYP010000222.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 9584)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9584)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9584
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_183632"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2672)
                     /locus_tag="VE783_07220"
     CDS             complement(<1..2672)
                     /locus_tag="VE783_07220"
                     /inference="COORDINATES: protein motif:HMM:NF015655.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53225.1"
                     /translation="MSAHTHLGIFADPDRARRELETLQAALPPELVAVIVHLLRDLPN
                     PDQALALCMRLVTAGQEYILLLDRNRVLLHHALALFGYSYWLGDALANDPDLLLFLAG
                     DKNLEHSFGVEECREHLRNFYSRGVESDPAALLARFKKTEYVRICLRDILGIATLAET
                     TQEISALADVILEEALRLADQALDTHWKHRLFSDADSSTRFTILSLGKLGGCELNYSS
                     DLDLFYLFDAGEAGAGAKEYFTRLAQFVTDVLSRSTAQGSVFRIDLRLRPQGRAGEAV
                     ISLKQALDYYSINAQDWELQALIKARYSAGDERIARDFMRGVEAFVYRKDLNFGAIET
                     AVRSREKLSSGAKLRSSVRSGTNIKLDPGGIRDIEFLVQCLQRAYGGEEKWLRSGGTL
                     LALQRLHDKGHISGKDFHELTMAYEFLRRVEHRLQFDRGQQTQTVPSDPQRLLVLERA
                     MRPRNDAAGSRPLPDLVTGHMRRVADIYQRIIHHHRSRKKLWILGKPAPASVHEMSFE
                     QMLERIGHDSPEVHALISRSDIPLHARRNLHRLLASAMTDRERYGALLEKPATIKTAI
                     VLLTRSDYLTEMFVRYPDCLRELEQAREIFPQTADEVRPLDGEEGLQHLRRVLRREMF
                     AVAAADVLSPFLIFESLGKTSRLAETAIRRALQITGGAGKLAVFALGRLGTQEFDLLS
                     DADLLLVRAPETDAAEARLPAERLIQALTAYTREGSMFAVDTRLRPYGGEGELVTTPG
                     ELESYLSRNAQPWEALTYTKLSFIAGNTQTATQVLPPMERRIIELAARPGFIAAVREM
                     RERLERANRYPHSFKQARGGFYDIDFIASFLMLRHGALAEGNTLERLRHLRDRGTLPE
                     SEFDELERATFLHRTADHVIRLVTGKARPELPDA"
     gene            complement(2728..4041)
                     /locus_tag="VE783_07225"
     CDS             complement(2728..4041)
                     /locus_tag="VE783_07225"
                     /inference="COORDINATES: protein motif:HMM:NF012766.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Xaa-Pro peptidase family protein"
                     /protein_id="HYX53226.1"
                     /translation="MKLRKITFLIVISALLAGAMERQPNADYRARRVTLAKNLEGGAF
                     ILFAPTEPEGPNDLYGFRQEDNFYYLTGWSEPGAAVFVNANPYAEILFLPEHNVTQEK
                     WTGPKLGPESPEAAKITGFDHVESLSKMRDELAKILPQPRVAVYSDLGSNGQSTASTG
                     PMEWLRRSNAFPNYVSFRDAHAILTRLRTFKDEHEVQLITKASEASVAAHLAALKAIH
                     PGVNEHDISALMQFEFEKRGCERPAYAPIVGSGFYSTVLHYSADDQVMKSGDLVVLDV
                     AGEYSMYASDITRTAPVNGKFTPRQREIYDIVLGAQEAAMNAFELGKSKLSGQDPTSL
                     YKVATDYINSHGKDLHGQPLGKYFIHGLGHPVGLNVHDPFDPSVPLAKGMVFTLEPGI
                     YIGEEKLGVRIEDVFYVDPATGKLVTLSKGLPRTADEVEQVMGAH"
     gene            4132..4971
                     /locus_tag="VE783_07230"
     CDS             4132..4971
                     /locus_tag="VE783_07230"
                     /inference="COORDINATES: protein motif:HMM:NF014564.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0008410 - CoA-transferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HYX53227.1"
                     /translation="MSFLPQTLSGVKVVSICINTPGPVAAARLVQMGANVTKVEPPAG
                     DPLKTFAAAWYGALSAGQTITTLDLKVPGDRAQLDALLASSDLLLASFRPSALRRLHL
                     DWASLHSRHPKLCFVGIVGYPVPQEEKSGHDLTYLAEAGLVTPPEMPSSLFVDLAGAE
                     RCVSASLALLLRYTRTGEAGCEFVSLFDAARELRAPVQAGLTAKGGILGGGSPLYNIY
                     HASEGWVAVAALESRFAERLVTELGLDKPDFGAIERALQQRRASEWESWAAERDLPIV
                     AVR"
     gene            5060..5899
                     /locus_tag="VE783_07235"
     CDS             5060..5899
                     /locus_tag="VE783_07235"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HYX53228.1"
                     /translation="MFQKDLLAGKRMLITGGATGLGKSMGKRFVELGAKLHICGRRED
                     VLAETAKELSAFGAPVKTFSCDVRDRERVEAMIEDFWKDGPLDILVNNAAGNFIARTE
                     DLSPGAFDAVIGIVLTGTINATMACGRRWLKAGHRANVLNISTTYAELGSGYVVPSAV
                     AKAGVLAMTRSLAVEWGKKGIRFNSIAPGAIPTEGAFSRLLPMKEMESFAAKKNPIGR
                     FGTHEELANLAAFLVSDFSGYVNGEHITMDGGALLQGAGSFNYIGDMLTPEMWEAIKP
                     KKK"
     gene            complement(5913..6596)
                     /locus_tag="VE783_07240"
     CDS             complement(5913..6596)
                     /locus_tag="VE783_07240"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HYX53229.1"
                     /translation="MEQNLLLVEDEDALCLTLSDRLRSEGYGVECARDGNEGLQKATK
                     SAYDLILLDVMLPKKNGFEVCREIRQAGLATPIIMLTARGETADKIAGLKIGADDYVP
                     KPFDMAELMARIEALLRRSHGKANGQDLYQFGNLRVDVRGTEVARDGKAVQLSAREFQ
                     LLRYLIEHRGATVSRNEILQEVWGYSADTFTRTVDVHVASLRQKIEVDPKKPELIVTV
                     PGLGYKFAG"
     gene            complement(6617..8506)
                     /locus_tag="VE783_07245"
     CDS             complement(6617..8506)
                     /locus_tag="VE783_07245"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing sensor histidine kinase"
                     /protein_id="HYX53230.1"
                     /translation="MRRLYKDRLLSTIVVLVMTGVLITLAVLQYRWSNEISRATSERM
                     EVDLETTIMRFRDDLYREVAGFSFALHVDPEAKPADRLKEYSRQYEIWSRSAEHASVI
                     RNIYVLEPGGNGRLLRRDPATSDFVTAPIPKDFDPLLNRLRSISNEVAVAATHLKSTQ
                     ELREERSNAAEIAKQFPVLVDEDLPALAQPVYRKITSSSSHADFQAIEWVIVELDNKV
                     LCQHIIPELLGRLFGLGKAQTPVYEVAVIDEPGPEIVYSSDAGFPGKGETEFDEKIRV
                     FGPPMGPTLRGIDMLMLPAYHTQDAEGRFHENNDIASTWPVRIEPIHYKTEDDDWYVI
                     ARHRKGSLEAAVAYMRHRDLAVSFTVLLLLSASMIMLFVSTRRAQSLARLQMDFVAGV
                     SHELRTPLAVICSAADNIADGVVGGREQMKQYGGVIKNSARQLIHLVEQVMTFAATYN
                     KRYPYNMAPLTAEEIVDTAYSNIAELAQAAGVTVERHIDSGLPIVIADRAAVAHCVQN
                     LITNAIKYGGEQHWVGISARLGERGGTKEIQISVEDKGMGIAPADLRHIFEPFYRSPA
                     VVAAQIRGTGLGLSLASSIAQAMGGKLTVTSEQGKGSCFVLHLPVSRAALRSNEVELT
                     APLKA"
     gene            8978..9232
                     /locus_tag="VE783_07250"
     CDS             8978..9232
                     /locus_tag="VE783_07250"
                     /inference="COORDINATES: protein motif:HMM:NF024143.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YtxH domain-containing protein"
                     /protein_id="HYX53231.1"
                     /translation="MLKFMTGLLCGVGVGLLIAPAAGEQTRQQLMRAVQDPNAIVREK
                     MQDVREKVGEVGANLGRQAAQQAMDKVTPESLNTSRDRAS"
     gene            complement(9236..>9584)
                     /locus_tag="VE783_07255"
     CDS             complement(9236..>9584)
                     /locus_tag="VE783_07255"
                     /inference="COORDINATES: protein motif:HMM:NF013629.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="transcriptional repressor"
                     /protein_id="HYX53232.1"
                     /translation="RDHLSTDELFRMVRKKDVKIGFTTVYRTLKLLAECGLASEVAFH
                     DGVTRYEHQFNRRSHHHMVCTECNASVEFFSPEAGKLSEDIARKFRFDATRHTFQIYG
                     ICEDCRKMSKKPV"
BASE COUNT         2044 a         2787 c         2778 g         1975 t
ORIGIN      
        1 tccgcgtccg gcagctccgg cctggcctta ccagtcacca ggcgaattac atggtctgct
       61 gtgcggtgaa ggaacgtggc gcgttccaat tcgtcgaatt ctgattccgg cagcgtccct
      121 ctatcccgaa ggtgacggag tcgttcgagc gtgttgccct cagcgagtgc tccgtggcgc
      181 aacattagaa atgaagcgat gaaatcaatg tcgtagaagc cacctcgggc ctgcttgaag
      241 ctgtgtggat accgattcgc tcgctccagc cgctcccgca tctctcttac cgcggcgatg
      301 aatccgggcc gggcagccag ttcgatgatc cggcgctcca tcgggggcag cacctgtgtt
      361 gcagtttgcg tattaccggc gatgaatgac agtttggtat aggtgagcgc ctcccaaggc
      421 tgagcgttcc gggaaagata gctttccagt tcgcctggag tcgtcaccag ctcaccttcg
      481 ccgccataag gacgcaggcg cgtatctacc gcgaacatgg aaccttcgcg ggtatatgcg
      541 gtcagagcct gaatcaaacg ctcggccggc aaccgcgcct ctgctgcatc ggtttcaggt
      601 gcgcgcacca gcagcaggtc agcatcagag agcaaatcga attcctgcgt gccaagtcgg
      661 ccgagcgcga acaccgcaag cttccccgcc ccgccggtga tctggagcgc acggcggatg
      721 gcggtctccg caagtcgaga ggtcttgccg agagactcga aaattaggaa gggtgagagc
      781 acatcagcgg cggcaacggc aaacatctcg cgtcgcaaaa cacgacggag gtgctgcagg
      841 ccctcctcac catccagcgg tcgcacttca tcggcagttt gcggaaaaat ctcgcgcgct
      901 tgctccagtt cgcgcaggca gtccggataa cgcacaaaca tctcagtgag gtaatcactt
      961 ctggtaagca ggacaatcgc cgtcttgatg gtggctggct tctccagtag cgcaccatag
     1021 cgctcacggt ccgtcatggc agaagccagc agtcgatgca ggttgcggcg ggcgtgaagc
     1081 ggaatgtcag agcgggagat gagggcgtgg acttcagggg aatcgtggcc aatacgctcc
     1141 agcatctgct cgaatgacat ctcgtgaacg ctcgccgggg ctggcttacc cagaatccat
     1201 aacttcttcc gggaacggtg atgatggatg attcgctggt aaatatctgc cacgcgccgc
     1261 atgtgccctg tgacaagatc cggtaacggg cggctgcccg ctgcatcatt gcgcggccgc
     1321 atggcgcgtt ccagcaccag cagccgttgc gggtcggagg gcacagtttg cgtctgctgc
     1381 ccacggtcga attgcagccg atgttccaca cgacgaagga actcatacgc catcgtcaac
     1441 tcgtgaaaat cttttccgct gatgtggccc ttgtcgtgga gcctttgtaa tgccagcagc
     1501 gtgccgcctg accgcaacca cttctcctcg cctccatagg cgcgttgcag gcattggacc
     1561 agaaattcga tatcgcggat cccgccggga tcgagtttga tgttggttcc cgaccggacg
     1621 ctggaacgca gctttgcgcc ggagctgagt ttttcccgcg aacgtaccgc ggtttcaatg
     1681 gccccaaaat tcaggtcttt gcggtaaaca aatgcctcaa ctccgcgcat gaagtcccgc
     1741 gcgatacgct catcgccggc cgagtagcgt gccttgatca atgcctgcag ctcccaatcc
     1801 tgcgcgttaa tggaatagta gtcgagtgcc tgtttcaggc tgattaccgc ctcaccggct
     1861 cgcccctgcg ggcgcaatcg aagatcgatg cggaatacgc tgccctgtgc tgtgctgcgg
     1921 gaaagaacgt cggttacgaa ctgggcaagg cgggtgaagt actccttcgc tccggcgcct
     1981 gcctctccgg catcgaaaag ataaaacagg tccagatctg agctgtaatt caactcgcag
     2041 ccaccaagct tgcccagaga cagtatcgtg aatctcgtgg aggaatccgc atctgaaaaa
     2101 agccgatgtt tccagtgcgt atcgagtgcc tgatccgcta gcctgagagc ctcttcaaga
     2161 atcacgtctg ccagtgcgga gatctcctgc gtggtttcgg ccagggtagc aatcccgaga
     2221 atgtcgcgca ggcagatgcg gacgtattcg gtctttttga accgcgccag caaagctgcg
     2281 ggatcggatt ccacaccacg ggaatagaaa tttctgaggt gttcacgaca ttcttcaact
     2341 ccaaacgagt gctcaaggtt cttgtcgcct gccaggaaga gaaggaggtc aggatcattc
     2401 gccagtgcat ccccaagcca gtagctgtag ccgaaaagag caagcgcgtg atgaagcaac
     2461 acgcgattgc ggtcaagcag cagaatgtat tcctggcctg ccgtgaccaa gcgcatgcag
     2521 agcgccagcg cctgatcagg attcgggaga tcccgcaaca ggtgaacaat cactgcaacc
     2581 agttcgggag gcagcgctgc ctgcagcgtc tctagttccc gacgggcgcg atcagggtcg
     2641 gcaaagatgc cgagatgggt atgggctgac aaggccgcca gaatagcaaa tctgcttgtg
     2701 caagatcgtc ggccagaaga tcggccgtta atgagccccc attacctgct caacctcatc
     2761 tgccgtgcgc gggagcccct tggaaagcgt caccagcttg cctgtggcgg gatccacgta
     2821 gaagacatcc tcgatcctca ctcccagctt ttcttcccca atgtaaatcc ctggctcaag
     2881 ggtaaagacc atccccttcg cgagcggcac gctcggatcg aaaggatcgt gaacattgag
     2941 ccccacagga tggccgaggc catggatgaa atatttgccc agcggctgtc cgtgcaggtc
     3001 tttgccatgc gagttgatat agtccgtggc gaccttgtaa agcgatgtgg ggtcctggcc
     3061 gctgagcttg gatttaccga gttcgaaagc gttcatcgcg gcttcctgcg ctcccagcac
     3121 gatgtcgtaa atctcgcgtt gacgtggagt gaacttcccg ttcacaggcg ccgttcgcgt
     3181 aatgtcggac gcatacatgg agtactcgcc cgcgacgtcc aaaaccacca ggtcgccaga
     3241 cttcatcacc tgatcgtctg ccgaataatg cagcaccgtg gaataaaatc ccgagccgac
     3301 gattggcgcg tatgccggcc gttcacagcc acgcttctca aattcaaact gcatgagcgc
     3361 ggaaatgtca tgttcattca ctccagggtg aatcgccttc aatgcggcca aatgcgcggc
     3421 aacgcttgcc tcgctggctt ttgtgatcaa ctgcacctca tgctcgtctt tgaacgtgcg
     3481 cagccgggta agaattgcat gagcatcacg aaatgagacg tagttgggga acgcgttgct
     3541 gcggcgcagc cactccatcg gtcccgtgga agcggtgctc tgcccgttgc tgccgagatc
     3601 ggaatacacg gcaacgcggg gctgcggcaa aatttttgcc aattcgtcac gcatcttgct
     3661 caggctctca acgtggtcaa agccggtaat ctttgcggcc tcaggcgatt ccggacccag
     3721 cttggggccg gtccacttct cctgcgtgac gttgtgctca ggcagaaaga gaatttcggc
     3781 atagggattc gcgttgacga agacggcagc gccgggctct gaccaccccg tcaggtaata
     3841 gaaattgtct tcctgacgaa aaccgtaaag atcgttgggg ccttcgggct cagtcggcgc
     3901 aaaaaggatg aacgcgccac cctcgagatt ctttgccagc gtaacgcgcc gtgcgcgata
     3961 gtcggcattg ggctggcgct ccatggcgcc ggcgagcagg gctgagatca cgatcaggaa
     4021 cgtaatcttg cgaagcttca ttcaactctc ccgtatgttc agcgctgcgg attttaacat
     4081 gcgcacgcag gcgaaccagc tgcggtgctc cgttctctat aatccagagt catgagtttc
     4141 ctgccccaga ccctaagtgg cgtgaaggta gtaagcatct gcatcaacac gccgggtcca
     4201 gtggcggcgg cgcggctggt gcaaatgggg gcgaacgtca ccaaagtcga gccgccggcc
     4261 ggcgatccgc tgaagacctt cgccgctgcg tggtacggcg cactctcagc agggcagacg
     4321 atcaccacac tcgaccttaa agtacccggt gatcgcgcac aactggacgc actgctagct
     4381 tcgtcagacc tgttgctggc atcgtttcgg ccctctgcct tgaggcgctt gcacctcgat
     4441 tgggcgagcc tgcacagccg tcatcccaaa ttgtgctttg tcggcatcgt cggctatcca
     4501 gtcccacagg aagagaagag cggccatgat ctcacgtacc tcgctgaagc cggcctggtt
     4561 accccaccag aaatgccttc gagtctattc gttgacctcg cgggggccga acggtgcgtt
     4621 agcgcctcac ttgcgcttct actgcgttac acgcgaacgg gtgaagcggg ttgcgagttc
     4681 gtttcactgt ttgacgcagc ccgcgaattg cgcgctcccg ttcaagctgg cctgacggcc
     4741 aagggcggaa ttctgggcgg tggatcgcct ctctacaata tttatcacgc cagcgaagga
     4801 tgggttgccg tggcagccct ggagtcgcgt tttgccgagc gtctggtcac ggaattggga
     4861 ctggacaaac ccgacttcgg cgcaatcgag cgcgccttgc agcagcgccg cgcttccgag
     4921 tgggagtcgt gggccgcaga acgagatttg cccatcgtgg cggtcaggta aggcgggctg
     4981 ctgagtccgg aagctgtatc gctcggaaaa gtcggcgttg tagtatgtgt tctcaccaca
     5041 acaggcagga gaagccaaga tgtttcaaaa ggaccttcta gcgggcaagc gcatgctgat
     5101 caccggcggg gccaccggat tgggcaagag catgggcaag cgttttgtcg agctcggcgc
     5161 aaagctgcac atctgcggac gccgcgaaga cgtgctggcc gaaactgcca aggagctctc
     5221 cgcgttcggc gcgccggtaa agacgttctc ctgcgacgtg cgcgatcgag aacgagtgga
     5281 ggcgatgatt gaggacttct ggaaggatgg cccgctcgat atcctggtga acaacgctgc
     5341 cggcaatttt atcgcgcgga cagaagatct ttcgcccgga gcttttgatg cggtcattgg
     5401 aatcgtgctg acgggaacca tcaatgcaac catggcttgc ggacggcgct ggctgaaggc
     5461 cgggcaccgc gcgaacgtct taaacatctc gacaacctac gctgagcttg gatccggtta
     5521 cgtggtccct tccgccgttg caaaggctgg tgtgcttgcc atgacgcgga gcctggcggt
     5581 ggaatggggc aagaaaggca ttcgcttcaa ctctattgca cccggcgcaa ttcctacgga
     5641 aggcgccttc tcccggctgc tgcccatgaa agagatggaa tcgttcgcgg ccaagaaaaa
     5701 tccaatcggc cgtttcggaa cgcatgaaga gctggccaat ctcgcagcct tcctggtgag
     5761 tgatttctcc ggctacgtca acggcgagca catcaccatg gatggcggcg cgctgctgca
     5821 gggtgccggc tcattcaact acattggcga catgcttacg ccggagatgt gggaggcgat
     5881 caagccgaag aaaaaatgag cgcccgcaac gctcatcccg caaacttata tcccagcccc
     5941 ggcacggtga cgatgagctc gggctttttg ggatctactt caatcttctg ccgcaggctg
     6001 gccacgtgca cgtccactgt acgggtaaat gtatccgcgc tgtagcccca gacttcctgc
     6061 aagatttcgt tgcgtgagac cgtggccccg cgatgctcga tgaggtagcg cagcaactgg
     6121 aactcgcggg cagagagctg gacagctttg ccgtcgcggg cgacttctgt tccccgcaca
     6181 tcgacgcgca gattgccgaa ctgatataga tcctggccgt tggccttgcc gtgggagcga
     6241 cgaagcaggg cctcaatgcg cgccatcaac tccgccatat cgaacggctt ggggacgtag
     6301 tcatccgccc caattttcag gccggcgatt ttgtcggccg tctctccgcg cgcggtgagc
     6361 atgatgatcg gcgtggcgag tccagcctgg cggatttcac ggcagacctc gaagccgttc
     6421 ttcttgggca gcatcacgtc cagcagaatg aggtcgtatg ctgatttggt ggccttttgc
     6481 agcccttcgt ttccatcgcg cgcgcattcc actccataac cttcactgcg caggcggtca
     6541 ctaagagtca aacagagagc atcttcgtct tcgacgagca gaaggttctg ttccatttct
     6601 ctcccgattg aggcggtcac gcttttaatg gggccgtgag ctctacttca ttgcttctga
     6661 gcgcggcgcg gctcaccggc aggtgcagca caaaacagct gcccttgccc tgttcgctgg
     6721 ttaccgtcag tttgccgccc atcgcctgtg caatgctgct ggcaagagag agtcccaacc
     6781 cggtaccgcg aatctgcgct gccactaccg cggggctgcg ataaaaaggc tcgaagatgt
     6841 gccgcaggtc ggccggcgca atccccatgc ctttgtcttc gacactaatc tggatttcct
     6901 tagtgccgcc gcgctcaccc aggcgggcgc taattccgac ccaatgctgt tcaccgccgt
     6961 acttgatcgc attggtgatc agattttgca cgcagtgggc cacggctgcg cggtcggcga
     7021 ttacaatcgg caagcccgaa tcaatatgcc gctccaccgt tacaccggcc gcctgcgcca
     7081 actccgcgat gttgctgtat gcggtatcaa caatctcctc cgccgtgagc ggagccatgt
     7141 tgtacggata gcgcttgttg taggtggcag caaacgtcat tacctgttca accaaatgga
     7201 tgagctgcct tgccgaattc ttgatgacgc cgccgtactg cttcatctgt tccctgccgc
     7261 ccaccacgcc atcagcaata ttgtccgccg cggagcagat cacggcgagc ggggtacgca
     7321 gttcgtgcga tactccggcc acaaaatcca tctgcagccg cgccaaagac tgtgcgcgac
     7381 gcgtgctcac aaaaagcatg atcatgctgg cagagagcag caggagtacg gtgaagctca
     7441 ccgccagatc gcggtgcctc atgtaggcaa cagcggcctc taaagatccc ttgcggtgac
     7501 gcgcaattac gtaccaatcg tcatcttccg tcttatagtg aatcggctcg atgcgcaccg
     7561 gccaggtgga agcgatatcg ttgttttcgt ggaaccgccc ttccgcgtct tgtgtgtggt
     7621 aagcggggag catcagcatg tcaatgccgc gcagggtggg tcccatggga ggaccgaaca
     7681 ccctgatctt ctcgtcaaat tccgtctcgc ctttgccggg aaatcccgcg tcagagctat
     7741 aaacgatttc aggtccgggc tcatcgatca ccgccacttc atacaccggc gtctgtgcct
     7801 tgcccaaacc aaacagacgc cccagaagct ccggaatgat gtgttgacac aaaactttgt
     7861 tatccagctc aacaattacc cattcaatgg cctgaaagtc tgcgtgactg ctggagctcg
     7921 taatcttccg gtacacaggc tgagcaagag caggaaggtc ttcatccacc agcaccggaa
     7981 actgcttggc aatttctgcg gcgttcgagc gctcttcacg aagttcctgg gtcgacttca
     8041 ggtgtgtggc cgcgactgcc acctcgttgc tgatggatcg caagcggttc agaagaggat
     8101 caaagtcttt gggaatcggc gcggtgacaa agtcagacgt agccggatcg cgccgcagca
     8161 gtcttccatt cccgccgggc tccagcacgt agatattccg gatgacagag gcatgttcgg
     8221 ccgagcggct ccagatctca tactggcggg agtactcctt caggcgatca gcaggcttcg
     8281 cctcgggatc gacatggagg gcaaagctga aaccggccac ttcccggtag agatcatccc
     8341 ggaagcgcat gattgtggtt tccaggtcca cttccatgcg ctcgctggtg gcccggctga
     8401 tctcgttact ccagcgatat tggagcaccg caagggtaat gaggaccccg gtcatcacca
     8461 ggaccacgat cgtcgacagc aagcgatctt tgtaaagacg tctcattcag aaccagcggc
     8521 aggcagactg gagctattgc aaggaaagta cttacgagac gggcctagcg ggcccagaat
     8581 cagccatcgc aaaagcacca gagcatcaaa aaggagcata tggccgcccg gaagagcttc
     8641 aaagccccag ctccaaggtg actaggattc tagccagagt tccccagcct gcctgtaaat
     8701 tcgctgtaaa cacattttag aggaattccg gttgccacgg gggtgacgtg gaacacggga
     8761 aagtggagta aaaaaaggag ccgcaccgta agcggggtag gcgcggccca ataaccactc
     8821 gcaaagactc tgttgcaatt atctaatcac agccgctccc gggcccgctg taaactccgg
     8881 gtaaacactt ctcttagaag aatgcggcaa aagacgcgac ctccagcgca tctcttccta
     8941 ttgcaaacta aatttcaatc gctaggagga gatatcgatg ttgaagttca tgaccgggct
     9001 gctctgtggg gtgggagtcg gcctgctgat cgcgccggca gccggagaac aaacgcggca
     9061 gcagctcatg cgggcggtac aggacccgaa tgcaattgtc cgcgagaaga tgcaggatgt
     9121 gcgcgagaaa gtaggcgagg taggcgcaaa tctgggacgc caggcagctc agcaagccat
     9181 ggataaggtc acgccggaga gcctgaacac ttcacgggat cgcgccagtt aaaggctaaa
     9241 ccggcttctt cgacatcttg cggcagtcct cgcagatgcc ataaatctga aacgtgtgcc
     9301 gcgtcgcgtc gaagcggaac tttctcgcga tgtcctccga aagctttcct gcttccgggg
     9361 aaaagaactc tactgaagcg ttgcactccg tacagaccat gtggtggtgg ctgcgacggt
     9421 tgaactggtg ctcatagcgc gtaacgccgt cgtggaatgc aacttcactg gccagaccgc
     9481 attccgccag cagcttgagc gtgcgataga cggtagtgaa gccgatcttc acatcttttt
     9541 tacgcaccat ccgaaacagc tcatcggtag aaagatggtc gcgg
//
LOCUS       DASQYP010000223         2430 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_264598, whole genome shotgun sequence.
ACCESSION   DASQYP010000223 DASQYP010000000
VERSION     DASQYP010000223.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 2430)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2430)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2430
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_264598"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..697)
                     /locus_tag="VE783_07260"
     CDS             complement(<1..697)
                     /locus_tag="VE783_07260"
                     /inference="COORDINATES: protein motif:HMM:NF025006.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxypeptidase regulatory-like
                     domain-containing protein"
                     /protein_id="HYX53233.1"
                     /translation="MKRTMYLLPGLALVLALACAAGWSQATLTRVEGKVTQAGKPLSG
                     VTVQFTNLDNGKTFKTKTDNNGSYIMVGLERTGYQIDVLSAAGEKIYSVKERVAAEGA
                     GVQDINLEVSGGSGGAPKMTKEQVDAIKAQNAKAEGMNTIIRQVQEAMNQKNWQAAEG
                     PLQQLVAQDPTRYEYPKALGDVELNLQKYDESVQNYEKAIQLAQGTKPDPKNPASDPA
                     KVKAAIAQMYTNEG"
     gene            complement(730..1404)
                     /gene="queC"
                     /locus_tag="VE783_07265"
     CDS             complement(730..1404)
                     /gene="queC"
                     /locus_tag="VE783_07265"
                     /EC_number="6.3.4.20"
                     /inference="COORDINATES: protein motif:HMM:NF018242.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008616 - queuosine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="7-cyano-7-deazaguanine synthase QueC"
                     /protein_id="HYX53234.1"
                     /translation="MLLSGGMDSSVCAALAVRESDAAALHISYGQRTESRERVAFEKI
                     CDRLGISQRLAIRNEVLSKVGGSALTDRAIAVPQAGDQIGGGEIPVTYVPFRNAHFLA
                     AAVSWAEVLDATSIYIGAVEQDSSGYPDCRPAYYEAFNQVIRTGTREGKISIVTPLIA
                     LRKSEIVKLGHEMGAPFDLTWSCYTREDRGCGVCESCQLRLRAFHEAGVADPIPYMQQ
                     PALNRV"
     gene            complement(1550..2230)
                     /locus_tag="VE783_07270"
     CDS             complement(1550..2230)
                     /locus_tag="VE783_07270"
                     /inference="COORDINATES: protein motif:HMM:NF015983.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HYX53235.1"
                     /translation="MHIIEIYRSIQGESSFAGLPCIFVRLAGCNLRCAWCDSEYTFSG
                     GKKISADEVEAEVLRLAPDGLVELTGGEPMLQERELVPLMNKLLERGYMLLLETSGER
                     PLENVPPAVHKIVDVKCPGSSEGGSFRMTNLATLTTRDEVKFVLADRGDYEFARDFVR
                     QHELASRVDSVIFSPAFSKTPSAERDSSNCLLDPRQLAEWILEDRPPVRLGLQIHKFI
                     WEPAMKGV"
BASE COUNT          486 a          764 c          617 g          563 t
ORIGIN      
        1 tcccttcgtt ggtatacatt tgagctattg cagccttcac cttcgctgga tcggaagccg
       61 ggttcttcgg atcaggcttc gtgccctgcg ccagttgaat ggccttttcg taattctgga
      121 ctgattcgtc gtacttctgc aggttcaact ccacatcacc caaggccttt ggatactcat
      181 aacgtgtagg atcctgtgcc accagttgct gcagcggacc ctccgccgcc tgccagttct
      241 tctggttcat cgcttcctgg acctggcgga tgatcgtgtt cataccctcc gctttcgcgt
      301 tctgggcttt aatggcatct acctgctctt tcgtcatctt tggtgcgcca ccgctgccgc
      361 ccgaaacttc aagattaatg tcctgcacgc cggcgccttc cgctgcgaca cgctccttca
      421 ccgagtagat cttttcccct gccgcagaca ggacgtcaat ctgataaccc gtacgctcca
      481 agccaaccat gatgtaggag ccattgttgt cggtcttggt cttgaaggtc tttccgttat
      541 ccagattggt gaactgcact gtgacaccag acagcggctt tccagcttgg gtgacctttc
      601 cctccacgcg cgtcagcgtg gcctgcgacc atccggcagc gcaggcaagc gccagcacca
      661 gggccagccc cggcagtaag tacattgttc tcttcatcga ataagcctcc ggcttgaaaa
      721 cctacgattc taaaccctgt tcaaggcggg ttgttgcatg tacggaatcg ggtccgccac
      781 gcccgcctca tggaacgcac gcaaccgaag ctggcaactt tcgcaaactc cgcagccgcg
      841 atcttcgcgc gtataacatg accacgtcag atcaaacgga gcgcccattt cgtgccccag
      901 cttcacgatc tctgattttc gcaacgcgat gagcggagta acgatgctga ttttcccctc
      961 ccgcgtgccg gtgcggatca cctgattgaa cgcctcgtaa taagccggac ggcaatccgg
     1021 atatccagag ctgtcctgct ccacagcgcc aatgtagata ctggtcgcat ccagtacttc
     1081 agcccagctc actgcggcag ccaaaaagtg cgcattgcgg aacggcacgt aggtcaccgg
     1141 aatctccccg ccgccaatct ggtctccggc ctggggtacc gcaatggctc tgtccgtcaa
     1201 agcggagcca cccactttgc tgagaacttc gtttcgtatt gccagtcgtt gcgagattcc
     1261 cagccggtcg caaattttct cgaatgctac ccgctcgcgc gattccgttc gctgtccata
     1321 gctgatatgc aacgctgctg cgtcgctttc acgaacggca agcgccgcgc agacgcttga
     1381 atccatacct ccgctgagca acacgaccga acgcggtttt tctcccgcca aacctttgac
     1441 tcctgagtta gatgcttttc tgcaaggggg ttgcagaagc agcctggctg ccctatacaa
     1501 cccataatta tctcaaaacc gggcgcaact gagtgcgctg acgcgccgtt tacacgccct
     1561 tcatcgcagg ttcccagatg aatttgtgga tctgcagacc aagcctgacc gggggcctat
     1621 cttccagaat ccattcggcc aactggcgtg gatcaagcag gcagttgctg ctgtcgcgct
     1681 cggcggatgg cgtcttggaa aacgccggtg aaaagatgac cgaatccact cgggacgcaa
     1741 gttcgtgctg tctcacaaaa tcccgggcga actcgtaatc tccgcggtct gccagcacga
     1801 atttcacctc atcacgtgtg gtgagcgtcg caaggttcgt catccggaag ctgccgccct
     1861 cgctcgatcc cgggcacttc acgtccacaa ttttgtgtac ggcagggggc acgttctcca
     1921 gcggacgctc gccgctggtc tccagcagca gcatataacc gcgttccagc agcttgttca
     1981 tcagcggaac cagttcgcgt tcctgcagca tcggttcgcc gccggtaagt tccaccagac
     2041 cgtccggcgc aagcctcagg acctccgctt ccacctcatc ggccgatatt ttcttgccgc
     2101 cgctgaaggt gtattcgctg tcacaccacg cgcagcgcag gttgcagccc gccagccgca
     2161 caaagatgca gggcagcccg gcaaaagaag attcgccctg aatggaacgg tagatttcaa
     2221 taatatgcat gaaaaatgat ctgcatgaaa gatgatacgg atcaacctga gcgacaactc
     2281 ctactccgag tagcgcgccg tggtcgtgtc cgtctcccag atggtcacgt ctttcactga
     2341 cactcggccg ctggtcaccg atttcatccg tgtgttggtc tcgtcgtaga agtagcgagc
     2401 caggttttct gctgaaggat tcaggatctt
//
LOCUS       DASQYP010000224         5407 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_116082, whole genome shotgun sequence.
ACCESSION   DASQYP010000224 DASQYP010000000
VERSION     DASQYP010000224.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 5407)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5407)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5407
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_116082"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..451
                     /locus_tag="VE783_07275"
     CDS             <1..451
                     /locus_tag="VE783_07275"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53236.1"
                     /translation="RPDLVGDPFAGTSTPGSYLNLAAFKVPCTFNGNPKNPDCLGGQH
                     FGNLGRNAFVGPNYKNFDFSLVKDTAVTERVTMQFRVDAFNLFNHPNFANPLWPNFGV
                     DFAQTLDTTGRGVGFLPITATPDVGTGNPFLGGGGSRNLQLALRFSF"
     gene            531..743
                     /locus_tag="VE783_07280"
     CDS             531..743
                     /locus_tag="VE783_07280"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53237.1"
                     /translation="MQKELTEQNLIKQMLLAFPELEAEFTELVRGDAPDTPHNYSGAA
                     IVGRYFRREADKGEISALLDTLRGIF"
     gene            775..966
                     /locus_tag="VE783_07285"
     CDS             775..966
                     /locus_tag="VE783_07285"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53238.1"
                     /translation="MNIIWITIFEHLIFNPTHLALVWPILGPESKKHIRDAAQRWSKA
                     VRVFHPNGNDLPIKHIPDE"
     gene            complement(979..1197)
                     /locus_tag="VE783_07290"
     CDS             complement(979..1197)
                     /locus_tag="VE783_07290"
                     /inference="COORDINATES: protein motif:HMM:NF021193.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PGPGW domain-containing protein"
                     /protein_id="HYX53239.1"
                     /translation="MRILREVTGWTSLALALILFPLPLLPTLLLLGGLVILASHYSWA
                     KRWLSRVKKLIPSAQPAQTIVAEEPATP"
     gene            1394..1888
                     /locus_tag="VE783_07295"
     CDS             1394..1888
                     /locus_tag="VE783_07295"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HYX53240.1"
                     /translation="MKLGEKLRYLRLVEGNLRGLGREMTQQEVVRAIAKELQQKFSQS
                     YLSQIESGSRPHLTNKTRLLLSKFFNVHPGYLVDDPEGFQTELISDVSTQEDKLDLWL
                     IQGAERFRNDPRVSRALLNLAKHDDSRRCLVLLDAILETPHLAEKLLNVLRPQANGGP
                     ESEA"
     gene            1890..2507
                     /locus_tag="VE783_07300"
     CDS             1890..2507
                     /locus_tag="VE783_07300"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53241.1"
                     /translation="MNWELFYLICFVVGFAFSAISFLTGTLHLHVHLPGHAHFYLGGH
                     AHGGKGGNGMLMFLNPMAIAVFLAWFGGTGYLLVHLRHIWVFAGLVLSSLAGFVGAAI
                     VLLFLTKVLMAHDYTLDPADFEMVGVLGRVSGKIRRAGTGEIIFEQQGARKASAARAE
                     TDEEITCGEEVVVTRYEAGVAYVRRWNELADQAGILPDSEHKESL"
     gene            2525..3976
                     /locus_tag="VE783_07305"
     CDS             2525..3976
                     /locus_tag="VE783_07305"
                     /inference="COORDINATES: protein motif:HMM:NF013324.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SPFH domain-containing protein"
                     /protein_id="HYX53242.1"
                     /translation="MELQTVWIIVGLGVLAVMFVIATFARLYRKVGPHEALVVYGFGG
                     TKVVKGGGKVIVPMVQTYRLLSLELMSFDVAPQQDLYTKQGVAVSVEAVAQIKVKSDE
                     MSIKTASEQFLTKTPQQREGLIRLVMEGHLRGIIGQLTVEQIVKEPEMVGDRMRSTCA
                     ADMSKMGLEVISFTIKEVRDKNEYIANMGRPDVARIKRDADVAAAEAERDTAIKKAEA
                     QRASAIARAQADQERVLAETLSQAKQAEATRDLEIKKAEYTELVKKQQAQADKAYEIQ
                     ANIQQQQVIAEQVRVQQIEKEQQIKVQEAEISRHEKELIATVLKQAEVERQRVLNLAE
                     AEKQRLIAEAEGKASAIRVQGEAEADIIFKKGEAEAKAMNIKAEAYQEYNQAAVVDKL
                     ITGLPEVVRAMAQPLSNVDKITIVSTGNGHSAGVSKITGDMAEIAAQVPALFESLSGM
                     RMSDLLSKVRLIGDKSAKPGDDDDSGKAKAAGK"
     gene            4035..4202
                     /locus_tag="VE783_07310"
     CDS             4035..4202
                     /locus_tag="VE783_07310"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53243.1"
                     /translation="MSNVSLAGVVLGLLAGIVIPMISNTLFFWLVVGLAPVIALAGAG
                     GRRGNGKQFQG"
     gene            4271..4924
                     /locus_tag="VE783_07315"
     CDS             4271..4924
                     /locus_tag="VE783_07315"
                     /inference="COORDINATES: protein motif:HMM:NF015945.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PspA/IM30 family protein"
                     /protein_id="HYX53244.1"
                     /translation="MERVATLIRANLNDLVDKAEHPEKMIKQVILDMENQLLQVKTQV
                     AIAIADEHLLEKKQKENEEKISEWTRKAELALDKKQEDLARAAIERSLQYKQMTESFT
                     QQVNDQKLQVETLKTALHKLQAKLEEARAKSDMLIAEHRRARTLDKAADARVPLEGSD
                     PVAAFDRMKNKVARQSAIGQAKTLLLDESTSVDDRFAQLEKEDEVNRILNELKAKRA"
     gene            5015..>5407
                     /locus_tag="VE783_07320"
     CDS             5015..>5407
                     /locus_tag="VE783_07320"
                     /inference="COORDINATES: protein motif:HMM:NF012415.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CAP domain-containing protein"
                     /protein_id="HYX53245.1"
                     /translation="MTSLLTAGASAAGPVSSPDRTLFELVNQARRRAGLNPLAWDDRL
                     AEAALRHSQQLASHKSLSHQFRGEPELAARASAVGARFSSVGENVAYAPTVSRAHDGL
                     MHSPPHRANILHPEFTAIGIAIVPRGDEL"
BASE COUNT         1260 a         1420 c         1633 g         1094 t
ORIGIN      
        1 ccgtcctgac ctcgtcggag atccgttcgc gggaaccagt acgccgggta gttacctgaa
       61 cctggcagcg ttcaaggtgc catgcacatt caatggcaat cccaagaatc ctgactgcct
      121 cggcggccag catttcggca accttggacg caatgccttc gttggcccga attacaaaaa
      181 cttcgatttc agcttggtga aggatactgc tgttacggag agggtcacca tgcaatttcg
      241 cgttgatgcc ttcaatcttt tcaaccaccc gaattttgcc aatcctcttt ggccgaactt
      301 cggcgttgat ttcgcccaga ctctcgatac tacaggccgc ggcgtcggat tcctgccaat
      361 cactgcaacc ccggatgtcg ggactgggaa tccattcctg ggcggcggtg gttcgcggaa
      421 cctgcagctc gcgttgcggt tcagtttcta gcgggtttga cacacgagta aggcgcggct
      481 gcggccgcgc cttttctttt taccagtaca atcagcagct gaactggcct atgcagaaag
      541 agctgacgga acaaaaccta atcaagcaga tgctccttgc cttcccggaa ctcgaagccg
      601 agttcacgga attggtgcga ggcgatgcgc ccgatacacc tcataattat tctggcgcag
      661 ctatcgtggg cagatatttc cgtcgggagg cggacaaagg ggagatttcc gcgctgcttg
      721 atacgctgcg cgggattttt tgaacgcgcg tcggcttcac gcgatgatca agcggtgaac
      781 atcatctgga tcacaatctt cgaacatcta attttcaatc caacacacct ggcgcttgtg
      841 tggccgattc ttggaccgga atcgaagaag cacattcgcg atgcagcgca acgctggtcg
      901 aaggcagtcc gcgtattcca tcccaatggg aacgacctgc ccatcaaaca tattcctgac
      961 gaatagagtt gagggagctt aaggcgtagc cggttcttcg gcgacgatgg tctgtgcggg
     1021 ctgtgctgat ggaatgagtt tcttcacccg gctcagccag cgcttcgccc aggaataatg
     1081 cgaggccagt atgaccaggc cgccgagcag aagcagcgtg ggaagcaatg gaagaggaaa
     1141 gagaattaaa gccaacgcca atgatgtcca gcccgtaact tcccgaagaa tcctcatggt
     1201 tcgttcccag cagcaaaacg tcagatgccg ggaagcttag aggggtttct taggcctcag
     1261 ggcctaggtg agactctgtc catccgcaag caaacaaagc agatgccgaa taaggaagaa
     1321 tttcaccgtt tcaagtctga tttcgcttga cgaactattg caaattgaaa tatgtttatt
     1381 gcgattagcg ataatgaaac tcggagagaa attgcgctat ttgcggttgg tcgaagggaa
     1441 ccttcgcggg ctcggccgtg agatgaccca gcaggaggtc gttcgggcta tcgcgaagga
     1501 actccagcag aagttcagcc agagttacct ttcgcagatt gaaagcggct cgcgtcccca
     1561 cctcaccaac aagacacgcc tgttgctctc aaagtttttc aacgttcatc cgggatacct
     1621 ggtggacgat cccgaaggct ttcaaacgga actgatttct gatgtgagca cacaggaaga
     1681 caagctggat ttgtggctga tccagggcgc ggagcgcttc cgcaatgatc cgcgggtgag
     1741 ccgggcgctt ttgaacctgg ccaagcacga cgattcgcgc cgctgcctgg tgctgctgga
     1801 cgcgatcctg gagacgccgc atttggcgga gaaattgttg aacgtgttgc gaccgcaggc
     1861 caatggtggc ccggaaagcg aggcgtagca tgaactggga gcttttctat ctcatctgtt
     1921 ttgtagtcgg gtttgcgttt tccgccatct ctttcctgac cggcacgctt catcttcacg
     1981 tgcacttgcc aggacacgcg catttttatc tcggcggcca tgctcatggc ggcaagggcg
     2041 gcaatggcat gctcatgttc ctcaatccca tggcgattgc agtgtttcta gcctggtttg
     2101 gtggaacggg atacctgctg gtccacctgc gccacatctg ggtcttcgcc ggactggtgc
     2161 tatccagtct tgccggtttc gtgggagcag cgattgtgct gctcttcttg accaaagttc
     2221 tgatggccca cgactacacc cttgaccccg ctgacttcga gatggtgggc gtgctgggaa
     2281 gggtcagtgg aaaaattcgc cgggcgggta cgggcgagat catttttgaa cagcaagggg
     2341 cgcgcaaggc ctcagcagcc cgcgccgaga ccgacgaaga aatcacgtgc ggcgaagaag
     2401 tcgtggtgac ccgctatgag gccggagttg cctatgtgcg ccgctggaat gaacttgcag
     2461 atcaagccgg cattctgccg gattcagagc acaaggagag tttgtgaaga gcttaggagg
     2521 ctctatggag ctacagacag tttggatcat tgttggtctg ggtgtactgg cagtgatgtt
     2581 tgtgattgcc acctttgcgc gtctctaccg caaagtaggt ccgcatgaag ccctggtggt
     2641 ttatggtttc ggcggcacca aggtggtgaa gggcggtggc aaggtgattg ttcccatggt
     2701 gcaaacgtac cgtttgttgt ccctggaact gatgtccttt gacgttgcgc cgcagcagga
     2761 cctttacacc aaacagggcg tcgcggtgag cgtggaggcg gtggcacaaa tcaaggtgaa
     2821 gtctgatgag atgtcgatca agaccgcgtc ggagcaattc ctcacaaaga ctccgcagca
     2881 gcgtgaaggg ctgatccggc tggtgatgga aggccacctg cgcggcatta ttggacagct
     2941 gacagtcgag cagattgtaa aggaaccgga gatggtgggc gaccgcatgc gttccacctg
     3001 cgcggcagat atgagcaaga tggggttgga agtgatttcc ttcactatca aggaagtgcg
     3061 ggacaagaat gagtacatcg ccaacatggg ccggccggac gttgccagga ttaagcgcga
     3121 tgccgatgtc gcggccgccg aagccgagcg cgatacggca atcaagaaag ccgaagcgca
     3181 acgtgcatca gccatcgccc gcgcccaggc cgatcaggag cgcgtacttg ctgagaccct
     3241 ctcccaggcc aaacaggctg aggccacgcg cgatctggag atcaagaagg ctgaatacac
     3301 cgaattggtg aagaagcagc aggcgcaagc cgacaaagct tatgaaatcc aggccaacat
     3361 ccagcagcag caggtgattg cggagcaagt tcgcgtgcag cagatcgaaa aagagcaaca
     3421 gatcaaggtg caggaagctg aaatctcacg acacgagaaa gagctgatcg ctaccgtgct
     3481 aaagcaggcg gaagtggagc ggcagcgagt gctgaacctg gcagaagcgg agaagcagcg
     3541 cctgatcgcg gaagctgaag gtaaagcgag cgccatccgg gtgcagggtg aggccgaggc
     3601 ggacatcatc ttcaagaaag gtgaggccga agctaaggcc atgaacatca aggccgaggc
     3661 ttaccaggag tacaaccagg ccgctgtggt ggacaagctg atcaccggct tgccggaagt
     3721 ggtgagggcg atggcccagc cgctttccaa cgtggacaag atcaccattg tctccaccgg
     3781 caacgggcac tccgccggag taagcaagat caccggagac atggcggaga tcgcggcaca
     3841 ggtcccagca ctattcgaat cgctgagcgg aatgcgtatg agcgatctgc tctccaaggt
     3901 acggctgatc ggtgataaat cggcgaagcc cggagacgat gatgactccg gcaaagcgaa
     3961 agctgcaggc aagtaggtaa tgtgggcaac ggatctcggt cccttgcctc tccgcgacag
     4021 gaggcggaga agttatgagc aatgtttccc tcgccggcgt ggttcttggg ttgctagcag
     4081 gaatcgtgat tcccatgatc tccaacaccc tgtttttctg gctggtggta ggtctggctc
     4141 cggtgattgc gctcgcaggc gcaggcggca ggcgcggtaa cggcaaacaa tttcaaggat
     4201 aaagcagatt caacccggat ggcgcttgcc tccggcattg ttgaaaggtt ttggaggaat
     4261 tatggcgttg atggaacgag ttgcaacttt gatccgggcc aacctgaacg acttggtcga
     4321 taaagccgag cacccggaaa agatgatcaa gcaggtgatc ctggacatgg aaaaccagtt
     4381 gctccaggtg aagacgcagg tcgcaatcgc aattgcggac gagcacctgc tggagaagaa
     4441 gcagaaagag aacgaagaga agatcagcga atggacgcgc aaagccgagc tggcgctcga
     4501 caaaaaacag gaagacctgg cgcgggcggc aattgagcgt tctctgcaat acaagcagat
     4561 gaccgagagc tttacccagc aagtgaatga ccagaagctt caggtggaga cgctcaagac
     4621 cgctttgcac aaactgcagg ccaagcttga ggaagcgcgc gcgaagagtg acatgctgat
     4681 tgcggagcat cgccgggctc gcacgctaga caaggctgcg gatgcacgag ttccgctgga
     4741 aggcagcgat ccagtcgccg ctttcgatcg catgaaaaac aaggtggcga ggcagtcggc
     4801 cattgggcag gccaagacgc tgttgctgga cgagagcacc agtgttgatg atcgctttgc
     4861 ccagctcgaa aaggaagacg aggtcaatcg catactgaat gaactgaagg cgaagcgcgc
     4921 gtagcacgca ggttagccgg cagctccgcg ggaccaagat catcaaggtg caatggaaaa
     4981 attttctggg tctctaatta ctcttgtatt ttgcttgacc tctttgctta cagcgggagc
     5041 ttctgccgcc ggcccggtct cctcgccaga tcggactctt tttgaactgg taaatcaggc
     5101 gcggcgccgg gctggcctca atccgcttgc atgggacgat cgtcttgccg aagcggcgct
     5161 gcgacactcg caacagctgg ccagccacaa gtcgctctcg caccagttcc ggggagagcc
     5221 agaactcgcc gcgcgcgcat ccgcagtcgg tgcacgtttc agctcggttg gagagaacgt
     5281 ggcttacgcg cccacggtct ctcgcgcgca tgacgggttg atgcactcac ctccgcaccg
     5341 cgccaacatt ctccaccccg agttcaccgc gatcggtata gcaatcgtgc cgcgcggcga
     5401 cgagctc
//
LOCUS       DASQYP010000225         2358 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_156697, whole genome shotgun sequence.
ACCESSION   DASQYP010000225 DASQYP010000000
VERSION     DASQYP010000225.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 2358)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2358)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2358
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_156697"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            264..695
                     /locus_tag="VE783_07325"
     CDS             264..695
                     /locus_tag="VE783_07325"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53246.1"
                     /translation="MRDLTDRLVRLTQELRALRLQLKWNTFQGPSPKSQDELLQQVVS
                     ADLVEQLRLATQQLTHFLWAYIDAAARNSGPDVDYAAQSRHLAEVTDLLQRLRQTSCP
                     AADQLGFVARITLAVDRHLQGQELEYSPPPQQQEMRFGKSA"
     gene            771..1169
                     /locus_tag="VE783_07330"
     CDS             771..1169
                     /locus_tag="VE783_07330"
                     /inference="COORDINATES: protein motif:HMM:NF012417.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HYX53247.1"
                     /translation="MVNWFKMLAMLKHIRWNDVELESLNPLLDRQMITGENLMLARVL
                     LKKGCVVPEHSHMNEQLTYILEGALKFWIDGKEVVVRAGEVLCIPPHMPHKAEALEDT
                     VDLDVFYPPRQDWLGKTDSYLRNAEPATSR"
     gene            1185..2351
                     /gene="chrA"
                     /locus_tag="VE783_07335"
     CDS             1185..2351
                     /gene="chrA"
                     /locus_tag="VE783_07335"
                     /inference="COORDINATES: protein motif:HMM:TIGR00937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015109 - chromate transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015703 - chromate transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chromate efflux transporter"
                     /protein_id="HYX53248.1"
                     /translation="MTPERGETTSLSEIAQVFLKLGTIAFGGPAAHIALMEEEFVRRR
                     GWLTRQEFLDRLGAANLIPGPSSTEMAIHIGFARRGWKGLVVAGVCFIFPAALIVGLL
                     AAAYVSYGSLPQIEGVLYGIKPVVVAIVAQACWKLARTAVKSVILFSIAVLAAVLYAF
                     NINTVGILILAAFLATGPLLFKVHHTPVLPALATWFTPSRLLSTSALVVASTGARFSL
                     LRLFGTFLKTGAALFGSGYVLLAFLRADFVLRLRWLTEKQLLDAISVGQFTPGPVFTT
                     ATFIGYVIAGVPGAIVSTIGIFLPGFFLVAASGPIVRNVRRHPIAAAAFDGVNVASLA
                     LMAVVAIQLGKAAVVDPITAVIAAVTLVMLLRTRINPAWPIAGGAVLGVIKSLF"
BASE COUNT          470 a          660 c          679 g          549 t
ORIGIN      
        1 gctaggccaa ggttcttccc ctctcaaatt atgcagactc tcctccggcc gaggttgcct
       61 gagtgggagg ttacgagggg accatggtgc ggccaagcca cccctgaccg gaaggacata
      121 gattaataat ttctaatctt gtactaatgc tacgtcacac tgcacttgtg gcagagcaga
      181 gttgctgata ctctttgtcc acttcgtcag ccactgactt ccggatcgtc tgcaagggtc
      241 caaaaaccta aaaaggaaag cacatgagag acctaacgga ccggcttgtc cggctcacac
      301 aggagctccg ggcactccga ttgcagctga agtggaacac ttttcaaggc cccagcccta
      361 agtcccaaga tgaacttctc cagcaggttg ttagtgcgga cctggtggag cagttgagat
      421 tagccacaca acagctcaca catttcctct gggcttatat cgacgcagca gccaggaatt
      481 ccggcccaga cgtagactat gcagcccaaa gccgccactt ggcagaggtg acggaccttc
      541 tgcagcggct tcggcaaacc tcgtgccctg ccgccgacca gctgggcttt gttgcccgca
      601 ttacccttgc agtggatcgc cacctgcaag gtcaggagtt ggagtattct ccaccgccac
      661 agcagcagga gatgaggttc ggcaagtctg cctgaagacc tctggcacaa tgtgtaatgc
      721 cccgccaatc tggcggggca ttttggtttt aaggcaaagg cacgttctcg atggtcaact
      781 ggtttaaaat gctggccatg ctcaagcaca tccgctggaa tgatgttgaa ctggaaagcc
      841 tgaatccgct gctcgaccgc cagatgatca ccggtgagaa cctgatgctc gcccgcgtgc
      901 tgctgaagaa gggatgtgtg gtgccggaac acagccacat gaacgagcag ctcacttata
      961 tcctggaagg cgctctcaag ttctggatcg acggcaaaga agttgtggtc cgggccgggg
     1021 aagtgctttg cattccgcct cacatgccgc acaaggccga agcgctggaa gacacggtgg
     1081 acctggatgt cttttatcct ccgcgccagg actggctggg gaagacggat tcctatctgc
     1141 gcaacgctga accggcgacc agccgctagg cgggccgctg caagatgacg cccgagcgcg
     1201 gggaaacaac ttctctatct gaaattgccc aggtgttctt aaagctgggg accatcgcct
     1261 ttggaggccc tgccgcccac attgcgctga tggaagagga gtttgtgcgc cgtcgtggat
     1321 ggctcacccg gcaggaattc ctcgatcggc tcggcgccgc taatctgatt cccggaccaa
     1381 gctcaacgga gatggccatc catatcggct ttgcccgccg aggatggaaa ggcctggttg
     1441 ttgccggtgt gtgtttcatt tttcccgcgg cgctcattgt tggtttgttg gcagccgcct
     1501 acgtaagcta cggctctctt cctcagattg aaggtgtcct ctacgggatc aaaccggtag
     1561 tggtggcaat cgtcgcgcag gcttgctgga aactcgcccg aacagcggtg aagtcggtta
     1621 tcttgttttc aatcgcagtg cttgcggcgg tgctgtatgc gttcaatata aacacggtag
     1681 gcattctaat tctggcggca tttctcgcca cgggacctct gcttttcaag gtccaccaca
     1741 cgccggtgct gccggcgctg gcgacatggt tcactccgtc ccgtttactt tccacctcag
     1801 ctctagtggt tgcaagcacc ggtgcgcggt tcagccttct gcgcctgttc ggaacgttcc
     1861 tcaaaacggg agcagcgctg tttggcagtg gatacgtgct gctggcattc ttgcgcgccg
     1921 attttgttct gcgcctgcgc tggctcaccg agaagcagtt actcgacgcg atctcggttg
     1981 gacaattcac accagggccg gtgtttacca ccgcgacctt cattggctat gtgatcgcgg
     2041 gcgtgcccgg cgcgattgtc tcaaccatcg gaattttctt gccgggattt tttctggtcg
     2101 ccgcgagtgg tcctatcgtg cgcaatgtgc ggcgtcatcc aattgcagcg gcagctttcg
     2161 atggagtcaa tgtggcttcg ctggcgctga tggcggtggt tgcgattcaa ctgggcaagg
     2221 ctgccgtggt tgatccaatc actgctgtga tcgcggcagt caccctggtt atgcttctgc
     2281 ggacgagaat caatcccgca tggccgattg ccggaggcgc agtgcttgga gtgataaagt
     2341 cactgtttta actgtgca
//
LOCUS       DASQYP010000226         9394 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_242393, whole genome shotgun sequence.
ACCESSION   DASQYP010000226 DASQYP010000000
VERSION     DASQYP010000226.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 9394)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9394)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9394
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_242393"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            93..1214
                     /locus_tag="VE783_07340"
     CDS             93..1214
                     /locus_tag="VE783_07340"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53249.1"
                     /translation="MKAANVPLRSLILLLAFPVFSLFANCQSQPPPQPQTPSQPADAQ
                     SERSAPAPIRKIKIVGIYFFGHEKDGIDLSRIRAALPVHAGDEVQIGASPSLRSRVTE
                     AVQKAQGNPPTDVEFVCCADTGGAFLYIGIAGRSYRPLKFNLAPTGTMRLPDSAMALN
                     HDLDAAFAKAIEKGDAGEDDSKGYALNHDPESRNIQLAIREFALKNEPIIYDVLSNSS
                     VVEHRRAAAEFLGYASQSQKQINALVRASRDPDDAVRNNAVRALTVLARSSPKVATMI
                     PATPFIDLLNSGTWTDRNKGSAVLMELTASRNPKLLAELRARALSALIEMARWDTGHA
                     MWSRYMLGRIAAIPEDQLNNLADEDDQVDKLISAARNAK"
     gene            1272..1787
                     /locus_tag="VE783_07345"
     CDS             1272..1787
                     /locus_tag="VE783_07345"
                     /inference="COORDINATES: protein motif:HMM:NF016840.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DinB family protein"
                     /protein_id="HYX53250.1"
                     /translation="MTGLPARTEAAPYYFNYIDRVTSPDILAELERQLEPTTAFLRGI
                     SEEKSLHRYAPDKWSIRELLSHLNDCERMFTFRAFWFARGFQTALPSFEQEIAAASAE
                     ADRIAWAEHLEEFQRIRRATISFFRHLPQEAWKSTGTASGNAFTVRALAYIAVGHVEH
                     HLAILRERYLG"
     gene            1838..2767
                     /gene="ligD"
                     /locus_tag="VE783_07350"
     CDS             1838..2767
                     /gene="ligD"
                     /locus_tag="VE783_07350"
                     /inference="COORDINATES: protein motif:HMM:TIGR02779.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003910 - DNA ligase (ATP) activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="non-homologous end-joining DNA ligase"
                     /protein_id="HYX53251.1"
                     /translation="MANQIIPFRVRPMLATLVNKPFDRAGWVYEEKYDGYRILAYKQG
                     KNVTLFSRNNKEKTQAFPSVASAVAKLKANTVLLDGEVVAFDRRKVSRFQLVQQGRST
                     RFAVFDCLYLNGIDLRRKPLADRREVLERIVAGNGELFVSRRLADNGLEAFRLAQQRG
                     FEGIVAKDAASPYVEQRSKSWLKVKVHQEEELVIGGFTSPAGSRLHLGALLLGAYDSA
                     GKLRFVGKVGTGFTHSTLYSLSKLLVPLVQPKAPFIDPPRGRGITFVAPKLVAQIAFQ
                     EWTADARLRQPVYLGLRDDKKPRECLLPREFES"
     gene            complement(2782..3075)
                     /locus_tag="VE783_07355"
     CDS             complement(2782..3075)
                     /locus_tag="VE783_07355"
                     /inference="COORDINATES: protein motif:HMM:NF018717.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1330 domain-containing protein"
                     /protein_id="HYX53252.1"
                     /translation="MSVYAIAQLTITNREVYNRYQSKFMGVMSLSKGRVLSADEHPQV
                     VEGTWDRQKLVLLSFPDEQSFREWESSPEYQEIAKDRKAGADAVVLLVKGFDR"
     gene            complement(3093..3371)
                     /locus_tag="VE783_07360"
     CDS             complement(3093..3371)
                     /locus_tag="VE783_07360"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF025895.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HYX53253.1"
                     /translation="MKANNPQQVTSGRFELERDGNTGFIDYNLAGNVLQLIHTEVPDA
                     LQGKCVASELAKGALEFAREKNLKVDVICPFISEYIEKHPEYAPLMVR"
     gene            3437..3781
                     /locus_tag="VE783_07365"
     CDS             3437..3781
                     /locus_tag="VE783_07365"
                     /inference="COORDINATES: protein motif:HMM:NF019498.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HYX53254.1"
                     /translation="MSHMGDAMQNFMDLAELLKQREQSGKSYLEFLRVPAMSAGIYSL
                     PAGGKDPQKPHREDEMYYVVSGRSMMQVGNEHRQVGPGSVIFVETEAEHRFYDIQEDM
                     VILVFFAPAEQE"
     gene            3994..4839
                     /locus_tag="VE783_07370"
     CDS             3994..4839
                     /locus_tag="VE783_07370"
                     /inference="COORDINATES: protein motif:HMM:NF015506.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015291 - secondary active transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TonB family protein"
                     /protein_id="HYX53255.1"
                     /translation="MSTQLLTEPQPKPPKGPEPVPASVSRIVATAPERELFTQTLVQD
                     SSPDRHRRFWTRFWSSAVQACVLVVLVLIPLWFTDALPIQQLATFLVAPPPPPPPPPP
                     APPTVKVQKIVSEMMNGQLRTPSKIPKEIKMIKEEEAPPPMTGFGVVGGVEGGVPGGQ
                     AGGVIGSILSSTAHTPVTQVVAAAPKKPLRVSSGISEGLLVQRVEPTYPAIAQRAHIQ
                     GTVRLQAIISKQGTIENLQLIEGHPMLVQAAIEAVKQWKYKPYILNGEPLEVETIVIV
                     NFHLG"
     gene            complement(4954..5379)
                     /gene="mscL"
                     /locus_tag="VE783_07375"
     CDS             complement(4954..5379)
                     /gene="mscL"
                     /locus_tag="VE783_07375"
                     /inference="COORDINATES: protein motif:HMM:TIGR00220.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008381 - mechanosensitive monoatomic ion
                     channel activity [Evidence IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="large conductance mechanosensitive channel
                     protein MscL"
                     /protein_id="HYX53256.1"
                     /translation="MMLKGFRQFIMRGNVIDLAVAVVIGAAFGAVVTSFVTNILNPLI
                     AAIVGKPDFSAFNVTINGGVISYGLFLNALISFLLIAAAVYFFMVAPMNAWKQRAARG
                     EPTPDPTTRKCPECLSEIPIAARRCAFCTTPMASAAETR"
     gene            complement(5414..6301)
                     /locus_tag="VE783_07380"
     CDS             complement(5414..6301)
                     /locus_tag="VE783_07380"
                     /inference="COORDINATES: protein motif:HMM:NF012472.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HYX53257.1"
                     /translation="MSTPSASAAGTVTLGNDLTVNRLGFGAMRITGEGIWGEPRDRAE
                     CKRVLKRLLDLGVNFIDTANAYGPEVSEPLIAEALYPYPKDLVVATKGGLTRQGPNQW
                     APVGRAEYLRQCVEMSLRHLKVERIDLYQLHRIDPRVPAEESLGELRKMQDEGKIRHV
                     GLSEVNVAEIRAARKILPIVSVQNKYNITDRSYEEVVEYCTKNNIAFIPWFPLAAGEL
                     TRPGGVLDSIAKAHKATTSQVAIAWLLRRSPMMLPIPGTSRVDHLEQNVASASLRLAD
                     SEWNAIEDTLRGSGTRVAS"
     gene            6496..6906
                     /locus_tag="VE783_07385"
     CDS             6496..6906
                     /locus_tag="VE783_07385"
                     /inference="COORDINATES: protein motif:HMM:NF014525.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="biopolymer transporter ExbD"
                     /protein_id="HYX53258.1"
                     /translation="MQLQSSRQLAAEMNLTPLIDILLVLLIIFMVVIPHTSLGERAEI
                     PQPSRPDSSHEPETALVLQLISKGEGSRPAIKVNQEQVSWDNLRARLETIFSTRGDRT
                     AFLKGDPDVDFEYVAEALDFSRRAGAERVGLISR"
     gene            7237..7734
                     /gene="rimP"
                     /locus_tag="VE783_07390"
     CDS             7237..7734
                     /gene="rimP"
                     /locus_tag="VE783_07390"
                     /inference="COORDINATES: protein motif:HMM:NF036577.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000028 - ribosomal small subunit assembly
                     [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA];
                     GO_process: GO:0042274 - ribosomal small subunit
                     biogenesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome maturation factor RimP"
                     /protein_id="HYX53259.1"
                     /translation="MAAGNDKIREIADRVATTHGVEVVEAELKGGGKARRLLVTIDKP
                     EGVTHEDCANVSRELSTILDVEDAVPGGSYTLEVSSPGLDRKLLKPQDYQRFTGNLLK
                     VMTREPVNGNRHFEGRLESFSGDRLTLELVKGNKKPKPGHAEHGQKIDIELANVEKAN
                     LVPEI"
     gene            7837..9393
                     /gene="nusA"
                     /locus_tag="VE783_07395"
     CDS             7837..9393
                     /gene="nusA"
                     /locus_tag="VE783_07395"
                     /inference="COORDINATES: protein motif:HMM:TIGR01953.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006353 - DNA-templated transcription
                     termination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination factor NusA"
                     /protein_id="HYX53260.1"
                     /translation="MASEIYNVIDAISREKGIDPQIVISAVEDAIVAATRKKDKSQEN
                     LRGELDKESGVIRVYAVKQIMASEDDIEDPQLEIPLEEARAIDPNAEVGGEVRFLKST
                     EGLGRISAQIAKQIIFQKVREAERDTVYNEYINRVGEVLNATVKRIEGPDVIFDIGKA
                     EARMPKKDQSRLESFSMGERVRVVLVRVDKNSKGPAVVVSRAAPELVQNLFQTEVPEI
                     YDGTVQIRAIAREAGERTKIAVMSKDKDVDAVGACVGMKGMRVQSIIRELRGEKIDII
                     EYHEDPVTFAEKALQPAKVSRVTVIDSSDKHLEVVVDDSQLSLAIGKKGQNVRLAAKL
                     LGWKIDIKSEEEKRQEVEQQMTNLVGASATPLDRVPDLGEAMIAKLHEAGITTVEALA
                     DMTPEQLEELPGVGPKTVEKISIAVNNYFLTLDGQPAEGAPAAEEAAPEYQEGAEGAA
                     AEAAAESEGLSVEAVPEEAASQESVTEASPEEAEPIAGTAEHSGAEAGHEEPAAEQQQ
                     GEAAQSSEES"
BASE COUNT         2146 a         2520 c         2833 g         1895 t
ORIGIN      
        1 gcgatgatta caaagtgttg aagatgagca ttccgacgca gaatgtggaa gtggtgcggg
       61 attagtcggg tcgaatcccg cttgaaagga ccatgaaagc agccaacgtg ccgcttagat
      121 cgttgatatt gctcctggcc tttcccgtgt tctcgttgtt cgctaactgc caaagccagc
      181 cgccaccgca gcctcaaacg ccttctcagc cggcggacgc acagagcgaa cgctccgctc
      241 cggcccccat ccgcaaaatc aagattgtcg gcatctactt cttcggccat gagaaagacg
      301 gtattgacct ttcccgtatt cgcgccgctt tgccggttca tgctggagac gaggtacaga
      361 tcggcgcgtc accgtcgctg cgcagcaggg tgactgaggc agtgcagaag gcgcaaggca
      421 atccaccaac tgacgttgaa tttgtatgct gcgctgacac aggcggagct tttttgtaca
      481 tagggattgc aggccggagc tatcgcccgc tcaagttcaa cctggctcct accggcacaa
      541 tgcgccttcc ggattcagca atggctctca accatgatct tgatgctgcc tttgctaaag
      601 ccattgagaa gggcgacgct ggtgaagatg attcaaaggg ttatgccctg aatcacgatc
      661 cggagtcgcg caacatacaa ttggctatcc gcgaatttgc cctgaagaac gagccgatta
      721 tttatgacgt cctgagcaac tcttctgtgg ttgagcacag aagggccgca gccgagttcc
      781 tggggtacgc aagccagtca cagaagcaga taaatgcatt ggtcagggca agccgcgatc
      841 ccgacgatgc agtccgcaac aacgcggtac gggcattgac ggtgctggca cgctccagtc
      901 cgaaggttgc gactatgatt cctgctactc cattcattga cttgttgaac tcagggacat
      961 ggacggatcg caacaagggt agtgcggtgc tgatggaatt gacggcctcg cggaacccaa
     1021 agctcctggc agaattgcgc gcccgcgcct tatcggcatt gatcgaaatg gctcgttggg
     1081 atacaggcca cgccatgtgg tcgcggtaca tgctgggacg aatcgctgcc atccccgagg
     1141 accaactgaa caacttggct gatgaagacg atcaggtgga caagctcatc tctgcagctc
     1201 gcaatgcaaa gtgaccggca gaagctcttc cttgccgctt ccaggcagca ctccctgtgt
     1261 agaatctttt catgactgga ctccctgccc gcaccgaagc ggctccgtat tacttcaact
     1321 atattgaccg cgtcacgtcg ccagacatcc tggcggaact tgaacggcag ctggaaccca
     1381 caacggcttt cctgcgcggc atctctgagg agaaatcgct ccaccgctat gctcccgata
     1441 aatggagcat ccgcgaattg ttgagccatt tgaatgactg cgagcggatg ttcacgtttc
     1501 gcgcattctg gttcgcgcgc ggcttccaga cggcgctccc aagctttgaa caggagattg
     1561 cggcggcatc tgccgaagcg gatcgcatcg cctgggccga gcatcttgag gagtttcagc
     1621 gcatccgccg tgcgacgatt tcattcttcc gccatctgcc ccaggaggca tggaagagca
     1681 ccggcacggc aagcgggaac gccttcacgg ttcgagcatt ggcttacata gcagtcgggc
     1741 atgttgagca tcatctcgcg attctgcgcg aacgatattt ggggtaaaag tcgcgccgta
     1801 aatacgttgt ccttccaggg cgtgctctcc tttatcgatg gccaaccaga tcatcccgtt
     1861 tcgcgtacgc cccatgctgg caacgctggt caacaaacca ttcgatcgcg ccggctgggt
     1921 gtatgaggag aaatacgacg ggtacaggat cttggcttac aaacagggga aaaacgtaac
     1981 gctgttctcg cgcaacaaca aagagaagac acaagcgttc cccagcgtgg catcggctgt
     2041 cgcaaagctg aaggcgaaca ccgttctgct ggacggagaa gtggtggctt ttgatcgccg
     2101 taaggtctcg aggttccagc ttgttcagca gggccggagc actcgttttg ctgttttcga
     2161 ttgtctgtac ctcaatggaa tcgatctgcg acgcaagccg ctcgctgatc ggcgcgaagt
     2221 gcttgaaaga atcgttgcag ggaacggaga gctgtttgtg tcgcggcgtc tcgcggacaa
     2281 tgggctggag gcgttccgtt tggcgcagca gcgcggcttt gaaggaattg tggccaaaga
     2341 cgctgcttcg ccctacgtgg aacagcgttc aaagagctgg ctgaaagtga aggtccacca
     2401 ggaagaggag ctcgtgatcg gcggcttcac cagccctgcc ggcagccggc tgcatctggg
     2461 agcgcttctg ttgggcgcct acgatagtgc cggcaaactt cgctttgttg ggaaagtggg
     2521 gacgggcttc acgcacagca cgctttacag tctctcaaag ttgctggtcc cccttgttca
     2581 accgaaagcg ccattcattg atcctccgcg cggtcgagga atcacctttg tagctccaaa
     2641 gctggtggcg caaatcgcat tccaggagtg gaccgccgat gccaggctcc ggcagccggt
     2701 ctatctcggc ctgcgcgacg acaaaaagcc acgggagtgt ttactgcctc gtgagttcga
     2761 gagctaaatc aaccagtctc gctaccgatc gaaacctttg accagcagca caaccgcgtc
     2821 cgcaccggct ttgcgatctt tcgcaatctc ctggtattca ggtgagctct cccattcacg
     2881 aaatgactgc tcgtcaggaa aagataggag cacaagtttt tgccggtccc aggttccttc
     2941 taccacctgc gggtgttcgt ccgcggatag cacgcggccc ttggagagcg acatcacgcc
     3001 cataaacttg gattggtaac ggttatagac ctcgcggttt gtgatggtaa gttgtgcaat
     3061 ggcgtagacg gacactcagc tctcctgacg ccttagcgta ccatcagcgg cgcgtactcc
     3121 ggatgctttt caatgtactc ggaaataaaa gggcaaatca catcaacttt cagattcttt
     3181 tcgcgcgcga attcgagtgc gcccttcgcc agttcggacg ccacgcattt cccctgcaac
     3241 gcgtcaggaa cttcagtgtg gatcagttgc agcacgttac cggctaggtt gtagtcgatg
     3301 aagccggtgt ttccatcgcg ttcgagttcg aaacggccgc tggtgacctg ctgtggatta
     3361 ttggccttca ccgttcctcc tgtgatcgtt tggattcgat gcgccagtgg gagcaggcgt
     3421 cgcaggtaaa atcccaatgt cacacatggg agatgccatg cagaacttca tggaccttgc
     3481 agaacttctg aaacagcggg aacagagcgg caaatcatac cttgaatttc tccgcgttcc
     3541 ggcgatgagt gccgggatct attcgctgcc cgcgggaggc aaagacccgc agaagccgca
     3601 tcgcgaagat gagatgtatt acgtggtgag cgggcgctcc atgatgcagg tgggaaatga
     3661 gcatcggcag gttgggccgg gctccgtgat tttcgtggaa acagaagcgg agcatcgctt
     3721 ctacgacata caagaagaca tggtcattct ggtttttttt gctccagcgg agcaggagta
     3781 gctgctgctg ggtcgttgcg tttcagtaca gcagcagttt ttctcatcag ggtagcgcgg
     3841 cacgtgtgca ggtcgcttca atgtgaccga catcactgtc cctgcatgcc cggaagatga
     3901 aaatgaagcg ttgcaggatg gagtagcaac gcgagcgact ttacggctca tttgcctccc
     3961 tcttgcacgg cgtggacgag gagggaaacc ccgatgagca cccagcttct aaccgagcca
     4021 caaccgaaac cacccaaagg tccggagccc gtaccggcgt ccgtcagccg cattgtagcc
     4081 acagccccgg aacgagagtt gttcacgcag acgctggtac aagacagttc cccagaccgg
     4141 catcgccgct tctggaccag gttttggtcc agcgctgtac aggcgtgtgt tttggtagta
     4201 ctggtgttga tcccgctctg gttcactgat gcgctcccga tccagcagct tgccacgttc
     4261 ctggtggcac cgccaccgcc tccaccgcct ccgcctcccg caccgcccac cgtcaaggtg
     4321 cagaagatcg tgagtgaaat gatgaacggc cagttgcgga cgccaagcaa gatcccgaaa
     4381 gagataaaga tgatcaagga agaagaggcg ccaccgccga tgaccggctt tggtgtggtc
     4441 ggcggcgtag agggaggagt gccgggcggg caggccggag gcgtgatcgg gtcaatctta
     4501 agcagcaccg cgcacactcc agtgacgcag gttgttgctg ctgcgccgaa gaagccattg
     4561 cgggtctcga gtggtatctc tgaagggttg ctggtacagc gtgtggagcc cacatatccg
     4621 gcaatcgcac agcgtgctca catccaggga actgtgaggc tacaggccat catctccaag
     4681 caggggacaa tcgaaaatct gcagctgatt gagggccacc cgatgctggt gcaggcggca
     4741 attgaagccg tgaagcagtg gaaatacaag ccgtacatcc tcaatggcga accgcttgag
     4801 gtggagacga tcgtgatcgt gaactttcac ctgggctgag ttgattctca atgtctcagg
     4861 cagagcggcg gaccaaacgg tccgccgctt tgagtttttc gttctaagtt acttctgcac
     4921 atttgcgctg aggcgtactg cggagtcagc gatctagcgg gtctccgccg ccgacgccat
     4981 gggcgtggta cagaaggcgc agcgccttgc cgcgatgggg atctcactta aacattcagg
     5041 gcacttcctg gtcgtaggat ctggtgtggg ctcgccacgg gcggcgcgct gcttccaggc
     5101 attcatgggg gccaccataa agaagtaaac cgcggccgcg atcagcaaaa aactgatcag
     5161 cgcgttcaga aagagtccgt aggaaatcac gccgccatta atagtgacgt tgaaggcgct
     5221 gaaatccggc ttcccgacta tagcagcaat cagtggattc agaatgttgg tgacgaaaga
     5281 agtcacaacc gcgccgaagg ctgcgccgat taccacagcg acggcgaggt caatcacgtt
     5341 cccgcgcatg atgaactgcc tgaaaccctt gagcatcatc tacccccttt agcggaaaat
     5401 gatactacgg ctttcagctt gccacgcgag ttcccgagcc acggagtgtg tcttcaatcg
     5461 cgttccactc agaatcagca agccgcaacg aggctgaggc gacattctgt tccagatggt
     5521 cgacgcgaga cgtgccgggg atcggcaaca tcatgggaga acgccggagc agccatgcga
     5581 tggcgacctg cgatgtcgtg gccttgtgcg ccttggcaat ggaatccaga actccaccgg
     5641 gtcgggtgag ttcgcctgcc gcaagtggga accagggaat gaaagcgatg ttgttcttcg
     5701 tgcaatactc caccacctct tcgtagctgc ggtctgtgat gttgtacttg ttctgcacgc
     5761 tcacaatcgg caggatcttc cgcgcagccc tgatctcggc cacattcact tccgaaaggc
     5821 ccacgtggcg gatctttccc tcatcctgca tctttctgag ttcccccagc gactcttccg
     5881 ccgggaccct gggatcaatg cggtggagct ggtaaaggtc aatacgctcc accttcaggt
     5941 ggcgaaggct catttcaacg cattgccgca ggtattcagc tcgcccaacc ggcgcccatt
     6001 ggtttggccc ctggcgggtg agcccgccct tggtcgccac caccaggtcc tttggatatg
     6061 gatacagcgc ttctgcaata agcggctcgc ttacttctgg accgtaagca ttggcggtat
     6121 caatgaagtt caccccgaga tctagaagac gcttcagaac gcgcttgcat tcggcgcggt
     6181 cgcgcggctc tccccagatt ccttctccgg ttatgcgcat tgcgccaaag ccgagccggt
     6241 tgacggtgag atcgtttcca agcgttacag ttcctgcagc agaagcggat ggtgtggaca
     6301 taggggattc gattcggcct gaatggggga agattcgtaa atgtggtgct cagcttacga
     6361 tgcagacgag gctcgtggtg gagagtgcca cgcggcatgg agccggtgta ctcataacgt
     6421 agtctcggga acttgcgatc actcatattt gtccaatgcc tcagagcagg aaggttgatg
     6481 ctctggagcg tcgaaatgca actacagtcc agccgacagc ttgcggcgga gatgaacctt
     6541 actccgttga tcgatattct tctggtactc ctgattattt ttatggtggt gataccacac
     6601 acttcattgg gcgagcgggc cgaaatcccg cagccgagcc ggccagactc atctcacgag
     6661 ccggagacag cgctggtgct gcagctgatc agcaaagggg agggaagccg tccggcgatc
     6721 aaagtgaacc aggagcaggt gagctgggac aatctgcgag caaggcttga aactatattt
     6781 tcaacccggg gcgacaggac cgctttcctg aagggcgatc ccgacgtgga ttttgagtat
     6841 gtggccgaag cactcgactt cagtcgcagg gcaggagcgg agagggtcgg gttgatctcg
     6901 cgctgaagga aaatctaagc agatgctctt gtttcgtctg gcgggacggg atgagtccaa
     6961 cgcgaggcca aaagcatcaa aagactaccc taacaggaaa tctgatgacg tggtaagtag
     7021 ttgatgctct tgcagttgtt cctgaaggct cgtattcagg ggcagtttgt cttttaggtg
     7081 aaacaagggt atcattagta ggtagttgta gctggtttcg gcccagtgcg aaagggtgcc
     7141 tggggtaatt cgatttggcg aacgtaccag tgggcggaac gcccactttt attttgcagc
     7201 attttggccg aatcgaatga atgatgcgca agaggaatgg ccgcaggaaa cgacaaaata
     7261 cgggagatcg cagatcgcgt ggccacaacc cacggggttg aagtggtgga ggccgagctg
     7321 aaaggcggcg gcaaggcgcg ccggcttctg gtaacgatcg acaagccgga aggcgtaacg
     7381 catgaagatt gcgccaacgt gagccgggaa ctctcaacga ttctggacgt agaagatgcg
     7441 gtgccgggcg gttcctacac gctggaggtt tcctcgccgg ggctggatcg caagctgctg
     7501 aagcctcagg attaccagcg attcaccggc aacctgctga aggtgatgac gcgcgagccg
     7561 gtaaacggga atcgccactt tgaaggcagg ctggagagct ttagcggtga ccggctgaca
     7621 ctggagctgg tgaagggcaa caagaaaccc aagccggggc acgcggagca cggacaaaag
     7681 atcgatattg aactggccaa tgtggagaag gcgaacttag ttccggaaat ctgagcaatt
     7741 gctcgagatc ggcatccacc gggaaacacg aagcaggccg ggcaagaagt aacaatgatc
     7801 ggggaaccgc aagaggggtc ctcaagggaa aaaggaatgg caagcgagat ttacaacgtc
     7861 attgatgcga tcagccgcga gaagggcatt gacccacaga tcgtgataag cgctgtggaa
     7921 gacgccattg ttgcggccac ccgcaaaaag gacaagagcc aggagaacct gcgcggcgaa
     7981 ctggacaagg agtccggcgt gatccgcgtg tatgcggtga agcagatcat ggcgtcagaa
     8041 gacgacatcg aagatccgca gctggaaatc ccgctggaag aggcccgcgc cattgatccc
     8101 aatgccgagg tcggcggcga agtgcgtttc ctgaagtcca cggaagggct gggccgcatc
     8161 tccgcgcaga tcgcgaagca gatcatcttc cagaaggtcc gcgaagccga gcgcgacacg
     8221 gtttacaacg agtacatcaa ccgggtgggc gaagtgctga acgccacggt aaagcgcatt
     8281 gaaggtccgg acgtgatctt cgatatcggc aaggccgaag cgcgcatgcc gaagaaggac
     8341 caatcgcgac tggagtcatt ctccatgggc gagcgggttc gcgtggtgct ggtccgcgtg
     8401 gacaagaact caaaaggccc ggcggtggtg gtttcacgcg ccgcgccgga gctggtacag
     8461 aacctgttcc agactgaagt gccggaaatc tatgatggca cggtgcagat ccgcgcgatt
     8521 gcgcgcgaag ccggcgagcg cacaaagatt gccgtgatgt cgaaagataa agatgtggac
     8581 gccgtgggcg cctgcgtcgg gatgaagggc atgcgtgtgc aatcgatcat ccgcgagctg
     8641 cgcggagaga agattgacat tattgagtac catgaagacc cggtgacgtt tgcagagaag
     8701 gcattgcagc ccgcgaaggt gagccgcgtc acggtaatcg acagctcaga caaacatctg
     8761 gaagtagtag tcgatgacag ccagctttcg ctagccatcg gcaagaaggg gcagaacgtt
     8821 cggctcgcgg ccaaactcct gggctggaag atcgacatca agagcgaaga agagaagcgc
     8881 caggaagtgg agcagcagat gacaaacctg gtgggcgctt ctgctactcc gctggaccgg
     8941 gtacctgacc tgggcgaggc gatgatcgcc aaactgcatg aagccggcat taccacggtg
     9001 gaggccctgg cagatatgac tccggaacaa ctggaagaac tgcccggagt aggccctaaa
     9061 actgtggaaa aaatcagcat tgcggtgaat aattactttc ttacccttga cggccagcct
     9121 gccgagggtg cgcctgcggc ggaagaagct gctcctgaat atcaggaagg cgcagaaggc
     9181 gcggccgctg aagcagcagc cgaaagcgag ggcttgagcg ttgaagctgt gccggaagaa
     9241 gccgcgtcgc aggaaagtgt gacggaagca tcgccagaag aagccgagcc gattgccggg
     9301 accgctgaac actcgggcgc agaagccggg catgaggagc ctgccgccga gcaacagcag
     9361 ggcgaggctg ctcagagcag cgaagaatct taaa
//
LOCUS       DASQYP010000227         5376 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_8382, whole genome shotgun sequence.
ACCESSION   DASQYP010000227 DASQYP010000000
VERSION     DASQYP010000227.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 5376)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5376)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5376
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_8382"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            171..2144
                     /locus_tag="VE783_07400"
     CDS             171..2144
                     /locus_tag="VE783_07400"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53261.1"
                     /translation="MKRLERRSFAYSFSFFRSALSVVALLTLATFALTAHAQEAAPSP
                     GSPGWVVIPVDEYRTLRSHAYPAERPPEPPPVDATLTRVDYDLRINSPGDLATGRATL
                     TVDVIKDGWVRVAIPAGLLVREARIDGKLVSLVPGPQGRSNQLSAMLSHAGRAVLQLE
                     VALPVNASAGEESISLPPSPSGITRAQLQLPRQGLEMRIVGGLIAEKNETGPEGRWLA
                     YGRGNEALTFSWHRKMDDHRLTQALRMRGSLTELVGLGEDATSVYAEVNLEITQGAAK
                     EARIQLPDKVTVNQVTGASVADWELRPGELRVVFLEPQEQSARFVITGETHGPREGDI
                     AVPLLRLLGAERETGGVAVEVLGAGEVRKQKAQGLETADPSELGEAVAARQSPLLVAY
                     KFRSGDSTSSRALNVNVARYTQQAVLMANVEEARYQVLMTSEGKTLVQARYAIRNNQR
                     NFLKLVLPQGSAVWSVVLDGKPMKPGESPDHDLLLPMEKSRAGEEAPPFLVEVLYLSR
                     QPGWLEKGSVKLPLPVLDLPVSRTGISFYHSPLFHVTAEPGAFRVQPYEQPFSTAFTN
                     GRVDIGQGSAFSIDGKRDLPAEKDRLQAVQSLVDDFRAKNSGGTTARVLPAAVAFPAF
                     GGSIFLMSELTAENKLPIVELTYQRDKKKDGGK"
     gene            2141..4468
                     /locus_tag="VE783_07405"
     CDS             2141..4468
                     /locus_tag="VE783_07405"
                     /inference="COORDINATES: protein motif:HMM:NF025006.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxypeptidase-like regulatory
                     domain-containing protein"
                     /protein_id="HYX53262.1"
                     /translation="MKKLLAFLMIYSLLASASEPATTTALPLPTSGNVTLPLAEYNRL
                     VDLATKSVKTYEQPPVAYTIKRADLKLHVSNDTVVGSMQLDGEVFSRNATKVPLASGM
                     TILNASHQGKALPLFEDGSSSTAVLPGSSDFSVGLETGMPLYIEAGRASFNLPVPAAG
                     SVKLALAIPGDHTEVHISPGLITSRTSSSGQTMLEATLVPNQTATISWATREIVAPVV
                     PREVRFLSDVKTLVSINEADLRVAALCDVTVVQGEPAQFALNVPEGYEITDVSGSTVD
                     GSEIDGTTLTVHLSASAPRTHQFLITMERPLNGAEKLDVPFVSFKDTQRETGELLVEG
                     SGAMELTAKEGGSLKRMDVKEISSYLRALAHTPLQAAFRYHRQPNESPSLALSWTRFP
                     DGPVLAAVAEKAVVTTLVTTEGRSLTEVVLTVKNQAQPFMKVGLPADATILSADVAGE
                     KVKPVQGTDGNRIPLLRANFRPSGAYTVSFVFMHSGTPFAKKGGSDIALPSMDLPISF
                     MEWEVFLPEQYKVKDFGGDAMAMNLLQPVSVVTKSGSNTWRGQTLGPYAGIRENQGLD
                     QMALSVPGVAAGRGSMSGYVVDPQGAVISGAEVKVTDLDRGRVYVGRTDGNGMWTILG
                     VPPARVKIEISAQGFKTAAIRGQVQDAEHGTFWGATKLTVGETSTTVEVTAEAPMVET
                     TQAQVTNTFSTTSINGVGGIGGGAVGGPREKKQKQQPDLQQNVASANVFNLQKKVSGV
                     LPVHIDVPRAGSSYHFARALVLDEETKLTFNYKTR"
     gene            complement(4538..>5376)
                     /locus_tag="VE783_07410"
     CDS             complement(4538..>5376)
                     /locus_tag="VE783_07410"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: protein motif:HMM:NF013594.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="M48 family metalloprotease"
                     /protein_id="HYX53263.1"
                     /translation="VFLLLIWLIRVSPKRWWLWAWLIALPCMVLLATILPVVVDPMFN
                     KFEPLDKTNPQLVDAIETVLHRGGVTIPRDCMFLMKASEKVTTLNAYVTGFGPSKRVV
                     VWDTTIQKATTPETLFVFGHEMGHYVLNHVVIGLCAGAVGLLIGLYVLYRISGWFLRK
                     FQQRWHIRELGDWAAVPMIILIFNILGFVAQPVVAGFSRMLEHNADIYGLEVTHSINP
                     NPQEAAAHAFQVLGELSLSYPYPSRAVVFWYYDHPAIPDRVVFAHEYDPWSKGEQPKY
                     VK"
BASE COUNT         1155 a         1557 c         1581 g         1083 t
ORIGIN      
        1 tcaactccgt tcttagttca gctaccaccg cggccccgtt gttcaaggac tggaaccgtg
       61 attcctttct tcagcgcgca gcagcagtac ctccaaaact gctgttcccg actgctgcgt
      121 aactatggcg ggccatattc cgtttcaaaa aatgaaaggc gtttacgccc atgaaaagac
      181 tagagagaag gtcattcgct tacagttttt catttttccg cagcgctctg agcgttgtgg
      241 cgctactcac gctcgcaact ttcgcgctca ctgctcacgc gcaggaggcc gcgccatcgc
      301 cgggctctcc tggctgggtg gtgattccgg tggatgaata tcggacgctc cgctcccacg
      361 cctaccctgc ggagcgcccg ccggagcctc ctccggtgga tgccacgctc acgcgcgttg
      421 actatgatct ccgcatcaat tcgccgggcg atcttgccac tggacgcgcc acactcacgg
      481 ttgacgtcat caaagacggc tgggtgcggg tggcgattcc tgccggattg ctagtgcgcg
      541 aagcccggat cgatggcaag ttggtctcgc tggtgccagg gccgcagggc agaagcaatc
      601 agctctctgc catgctctcg catgccggac gcgccgttct gcaactggaa gtcgccctcc
      661 cggtgaacgc ctccgcgggc gaagaaagca tttctctgcc accttctcct tctggcatca
      721 ctcgcgccca gctccagctt ccgcggcagg gtctggaaat gcgcattgta ggcggcctga
      781 tcgctgaaaa gaacgaaacc ggaccggaag gccgctggct ggcttacggt cgcggcaacg
      841 aggcgctgac tttctcatgg caccgcaaaa tggacgacca tcggcttacg caagcgttgc
      901 gcatgcgcgg ctccctgacg gaactggttg gccttggtga agacgctacg tcggtttacg
      961 ccgaagtcaa tcttgagatc acgcagggcg ctgccaaaga agcgcggatt caactgccgg
     1021 acaaagtcac cgtcaaccag gtcaccggcg cgtcggttgc tgactgggaa ctcaggcccg
     1081 gagaactgcg cgtagtcttc ctggagcccc aggaacagtc cgcccgtttt gttatcaccg
     1141 gtgaaacgca tggcccgcgc gaaggagata tcgcagtgcc gctcctgcgg ctactcggcg
     1201 cggaacgcga gactggcggc gtggccgtgg aagtccttgg cgccggcgaa gtacgcaagc
     1261 agaaagccca ggggcttgaa accgccgatc cttctgaact gggggaagcg gtggcggcgc
     1321 gccagtcgcc gctgctggtt gcctataaat tccgcagcgg tgattcaacc tcaagtcgtg
     1381 ccctgaacgt gaacgtagcg cgttacacgc agcaggctgt gctcatggcc aatgtggaag
     1441 aggcgcgcta tcaagtgttg atgaccagtg aagggaagac gctggtgcag gcgcgctatg
     1501 ccatccgcaa caaccaaagg aacttcctca aactcgtcct gccgcagggc tcggcggtgt
     1561 ggagcgtggt gctggatggg aaaccgatga agccaggcga gtctcctgac cacgatctgc
     1621 tcctgccaat ggagaaatca cgcgccgggg aagaggcgcc accgtttctg gttgaggtgc
     1681 tctatctgtc gcggcagcca ggctggctgg agaagggatc ggtaaagctg ccgttgcccg
     1741 tactcgatct accggtttcg cgcactggaa tctcgttcta tcactcgcct ctatttcacg
     1801 tgactgctga acccggtgcc ttccgcgtcc agccatatga acaaccgttc tcaacggcgt
     1861 ttacgaacgg gcgagttgac atcggacagg gtagcgcttt ttccatcgac ggcaagaggg
     1921 atttgcctgc tgaaaaagat cggttacagg cggtccaatc cctcgtcgat gacttccgcg
     1981 ccaaaaactc cggcggtacc accgcccgcg ttctgccggc ggccgtggcg ttcccggctt
     2041 tcggcggctc gattttcctc atgtctgaac tcacggccga gaacaaactg cccattgtgg
     2101 aactgactta tcagcgtgac aaaaagaagg atggtggcaa atgaaaaagc tgcttgcatt
     2161 cttaatgatc tattcgcttc tggcttcggc ctcagaaccg gcaaccacaa ccgcgctgcc
     2221 actcccgacg tctggtaatg tcacgctgcc gctggcggaa tacaaccgtc tggtggacct
     2281 ggccacgaag tcggtaaaga cctacgaaca gccgcctgtg gcttacacca tcaagcgagc
     2341 tgacttgaag ctgcacgttt ccaatgacac tgtggtggga tcaatgcaac tcgatggcga
     2401 agtgttcagc cgcaatgcca ccaaggttcc gcttgcttcg ggcatgacca ttctgaatgc
     2461 gagtcatcag gggaaggcgc tcccgctctt cgaagacgga tcctcatcca ctgccgtact
     2521 gcccggctcg tcagatttct cggtcgggtt ggagacagga atgcctctgt acatcgaagc
     2581 cggacgcgcc tccttcaatc taccggtgcc cgcggccggc agcgtcaagc ttgcgctcgc
     2641 cattcccggc gaccatacgg aggtccatat ctcaccggga ttgatcacgt cacgcacctc
     2701 cagcagcggc caaacaatgc tggaagccac cctggttccg aatcaaacag caaccatctc
     2761 ctgggccacg cgggaaattg tggcgcccgt ggttccgcgt gaagtacgtt ttctttccga
     2821 tgtgaagacg ctggtctcca tcaacgaagc tgatctgcgt gttgccgcac tctgcgatgt
     2881 aaccgtggtg cagggcgagc cggcgcagtt tgctctaaac gtgccggaag gctacgaaat
     2941 cactgacgta agcggttcca ccgtggatgg aagtgagata gatggaacta ctttgacggt
     3001 gcatctgagc gccagcgcac ctcgaactca tcaatttctc atcaccatgg agagaccgct
     3061 caatggcgca gagaaactcg acgttccgtt cgtgagcttc aaggacacgc agcgtgaaac
     3121 cggcgaactc ctggtggaag gctccggtgc gatggaactc accgccaaag aagggggcag
     3181 ccttaagcgc atggacgtga aggagatcag ctcgtatctg cgtgcgctgg ctcacacccc
     3241 cctgcaggcg gcattccgtt accatcgcca acctaatgag tcaccctctc tcgctttgag
     3301 ctggacgcgc tttccggatg ggccggtgct cgctgcggtt gcggagaaag ctgtagtcac
     3361 gactctggtg acaaccgaag gtcgctcgct gacagaagta gtactgaccg tgaaaaatca
     3421 ggcgcagccg ttcatgaaag ttggtctgcc ggcggatgcg acgattctct cagctgatgt
     3481 tgccggcgag aaggtaaagc cggtacaggg aactgatgga aatcgcattc ccttgctgcg
     3541 cgctaacttc cgcccgagcg gggcatacac ggtgtcgttc gtcttcatgc attctggtac
     3601 gccttttgcc aaaaaaggcg gctcggatat tgccttgccc agcatggacc tgccgatcag
     3661 cttcatggag tgggaggttt tcctgcctga gcaatacaag gtgaaggact tcggcggcga
     3721 tgccatggcg atgaatctgc ttcaaccggt tagtgtagtc acgaagtccg ggagtaatac
     3781 ctggcgtggc cagactctgg gcccctacgc aggtatccgg gaaaaccaag gtctggatca
     3841 gatggcgctc tctgtgccgg gcgtggccgc gggacggggt tcgatgagtg gctacgtggt
     3901 agacccccag ggggcagtca tctcgggagc ggaagtcaaa gtcaccgacc ttgatcgcgg
     3961 ccgggtttac gttggccgca cagatggcaa tggcatgtgg accatcttgg gcgtgccacc
     4021 agcccgagtc aagatagaaa tctctgcaca gggtttcaag accgcagcca ttcgcggcca
     4081 ggttcaggat gcggagcacg gaaccttctg gggagctacc aagctgacgg ttggtgagac
     4141 ctcaaccacc gtagaagtca ctgctgaagc gcccatggtg gaaacgacac aggcacaggt
     4201 cactaataca ttttcaacca ctagcattaa cggtgttggt ggtattggtg gcggcgccgt
     4261 cggcggcccc agggaaaaga agcaaaagca gcagcctgac cttcagcaga acgtcgcttc
     4321 ggcgaacgtc ttcaatctgc agaagaaagt ctccggggtg cttccggttc acatcgacgt
     4381 tccccgggca ggcagttcgt atcacttcgc gcgggccttg gtgctcgacg aggagacgaa
     4441 actgactttc aactataaga cgcggtaaga gctgagagcc gcgaatgaaa gcgaatttcg
     4501 accgggtaag atcatgcgct ctcgttcgcg gcattcctca cttcacatac ttcggctgtt
     4561 cgcctttgct ccacgggtcg tactcgtggg caaacaccac gcggtccggg atggccgggt
     4621 gatcgtaata ccagaacaca acggccctgc tcgggtacgg ataggaaagt gaaagctccc
     4681 ccagcacctg aaaggcgtgc gcggcggctt cctgcgggtt gggattgatg ctatgcgtga
     4741 cctctaggcc ataaatgtcg gcattgtgtt ccagcattcg actgaatccg gcgacaaccg
     4801 gttgcgcgac gaatcccagg atgttgaata taagaatgat catgggcacg gctgcccagt
     4861 cacccagttc gcgaatgtgc cagcgttgct ggaatttgcg caggaaccag ccggaaatgc
     4921 gataaagcac ataaagaccg atcagcaacc cgactgcgcc ggcacaaagc ccaatgacga
     4981 cgtggttcag aacgtaatgg cccatctcgt ggccaaagac gaagagcgtc tccggcgtgg
     5041 tggctttctg gatcgttgta tcccacacca caacacgctt cgacgggcca aacccggtga
     5101 cgtaggcatt cagtgtggtg accttctcgc tggccttcat caggaacatg cagtcgcgcg
     5161 ggatggtcac gccaccgcga tggagaaccg tctcaatggc atcgacgagc tgaggattgg
     5221 ttttatccag tggctcgaat ttgttgaaca tggggtcgac gacgactgga aggatcgtcg
     5281 caagtagaac catgcagggc agcgcgatca accatgccca aagccaccac cgtttaggcg
     5341 aaacgcgaat caaccaaatc agcagtaaga acacga
//
LOCUS       DASQYP010000228         6509 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_30638, whole genome shotgun sequence.
ACCESSION   DASQYP010000228 DASQYP010000000
VERSION     DASQYP010000228.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 6509)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6509)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6509
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_30638"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..285
                     /locus_tag="VE783_07415"
     CDS             <1..285
                     /locus_tag="VE783_07415"
                     /inference="COORDINATES: protein motif:HMM:NF014841.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HYX53264.1"
                     /translation="YLMNVSRGPLIDEPALVEALKNRQIAGAALDVFNEEPLPADSLF
                     WELDNLLITPHSAAVTEKLWDRHYDLIVENMSRFLAGKPLLNSVDTRRGY"
     gene            322..525
                     /gene="thiS"
                     /locus_tag="VE783_07420"
     CDS             322..525
                     /gene="thiS"
                     /locus_tag="VE783_07420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003110013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0009228 - thiamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfur carrier protein ThiS"
                     /protein_id="HYX53265.1"
                     /translation="MQIQLNGESREVAEGITLAALVAQLGMKADRVAVELNLEIVPRA
                     KWESTVLKSGDRLEVVHFVGGGS"
     gene            complement(569..1012)
                     /locus_tag="VE783_07425"
     CDS             complement(569..1012)
                     /locus_tag="VE783_07425"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53266.1"
                     /translation="MSDCPMHAQHQAQSSHDHALKQRGDTGMGFNQDKTTHHFLIAED
                     GGAIQVTANNAKDKDSIAEIRMHLQHIASAFQQGDFDIPMFVHDQTPPGVPTLTRLKG
                     EISYKYETIENGGQVAISSANPEALAAIREFLRFQIEEHKTGDPK"
     gene            complement(1093..1608)
                     /locus_tag="VE783_07430"
     CDS             complement(1093..1608)
                     /locus_tag="VE783_07430"
                     /inference="COORDINATES: protein motif:HMM:NF024803.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MerR family transcriptional regulator"
                     /protein_id="HYX53267.1"
                     /translation="MTNDSERSNLRAGELARHAHVSRDTLRYYERMKLLPKPQRLANG
                     YRCYAPAALARIKLIRAALGIGFTVDELKEILAQRDRGEAPCKRVHELALQKAQALES
                     RIAELKDLQRTLRKAIRTWEQRLQSTAPGKRAGLLELFVASNPQSIEAISPMISPGLQ
                     RKIQNSRGIRK"
     gene            1776..3560
                     /gene="aspS"
                     /locus_tag="VE783_07435"
     CDS             1776..3560
                     /gene="aspS"
                     /locus_tag="VE783_07435"
                     /EC_number="6.1.1.12"
                     /inference="COORDINATES: protein motif:HMM:NF001750.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016874 - ligase activity [Evidence IEA];
                     GO_process: GO:0006418 - tRNA aminoacylation for protein
                     translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate--tRNA ligase"
                     /protein_id="HYX53268.1"
                     /translation="MALDFLGELRRTHQCGELRAENAGEQVVLMGWVNRRRDLGNVIF
                     IDVRDRTGLTQFVFDKSDNAALHEKASQLRSEYVVAAIGKVRKREDKTVNRNLPTGEI
                     EVVATDLKLLNESKVPPFLPGDPALANEEMRLKYRYIDLRREPMQYNIELRHKVALAI
                     RQYLAGHGFFEIETPFMTRSTPEGARDYLVPSRVYPGEFYALPQSPQLFKQILMISGF
                     DKYFQIVRCFRDEDLRADRQPEFTQIDLEMSFPQPDRVFEVVEGFLQAAFKVAGFELK
                     APFPRMTYDEAIRQYGIDKPDLRLPKLTDVGTAFAAEQLQTLQLNPELPVVAIRIPKI
                     GELSRKERDDNRPLFGERKEARLIDDVKRLEKSFPEAVAKVREMAGAQPEDLLVLVGG
                     PSQAEKSGLRPDYGVFMAAGQFRVELSRKYADRHMAFRQGGFHFTWVTDFPMFEWDEN
                     DKRWNAAHHPFTSPHERDMDKLESDPGSVRALAYDVVLNGTELGSGSIRIHRQDIQKK
                     IFHALGMTDEEAKSRFGFFLEALEYGTPPHGGIALGLDRIVMILAGAESLREVIPFPK
                     TAKAVDLMVDAPTPVSEAQLRDLGIKIR"
     gene            complement(3644..4960)
                     /locus_tag="VE783_07440"
     CDS             complement(3644..4960)
                     /locus_tag="VE783_07440"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HYX53269.1"
                     /translation="MATKPAVTPIATGIAVRTLIVLILVNIINFYDRHVAGALAEPLR
                     HEFGLTDSQIGLISTVFTILYAIVGIPIGRLADTGSRKKLLAVGIVVWGCVTGMAAWA
                     RSLAMLVASRLGLAVGEAVCAPVATSWIGDLFAPNRRSRPLALFMLGVPVGGALSFFF
                     SGPIAQRFGWRPAMIVAAIPALLLAPVVLMLPEPLRGASETSSATTQRPSRSGLLTPT
                     FAWIIASGVLVNFNLYALGTFLPAFFQRVHHLKVGSAGISTGLVYAIGGILGGTIGGA
                     WGDRLVRRHANGRMLLAAYAAVISAPLAYLGIRQGFGALAIAVPLLTAAYGLLNMYYG
                     LVYASLQDIVAPAQRATAMAVYFLVMYLGGASFGPVITGRLSDFMAHRAAGALPITEA
                     FKAIGLQQAMQVVPVLAVGLGIVLWAGSRTIERDAQRQRATVSTAA"
     gene            5116..6252
                     /locus_tag="VE783_07445"
     CDS             5116..6252
                     /locus_tag="VE783_07445"
                     /inference="COORDINATES: protein motif:HMM:NF024700.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HYX53270.1"
                     /translation="MPIKEVHVTGYRSVRDLRLKLRHINILTGPNASGKTNLYNSVFL
                     LAKAAAGGFARVIAEEGGMASVLWAGERKGRALPSARLEPVRMGLGVKTDTFNYEMVC
                     GLPKPCRSAFDLDPEVKEERVWMEAQRGMKVTFFERTAERSWILDREERLSDYSGELL
                     PTESVLSQLREPHLYPELSALRSEMGQWRFYHHFRTDHESPLRHPQVGVRTPVLSHDG
                     RDLAAALQTIIEIGQEEDLHEAIRQAFPGAALEIDHDEESGMFAVLLRMPGLKRPLRA
                     RELSDGTLRYLCLLAALLSPRPPALLALNEPETSLHPDLLEPLAHQMVNAAKHSQLWV
                     VTHSQKLAELVERFSGEGPIKLELVGGETKVAGQKLVEMAEEAG"
     gene            complement(6281..>6509)
                     /locus_tag="VE783_07450"
     CDS             complement(6281..>6509)
                     /locus_tag="VE783_07450"
                     /inference="COORDINATES: protein motif:HMM:NF013053.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="isochorismatase family protein"
                     /protein_id="HYX53271.1"
                     /translation="AHICVTQTVLGALENGHLVHVAADAISSRSELNWKIGVDRMRDS
                     GAVISSTEMMMYELMGKSGTPVFKEMLKHLK"
BASE COUNT         1361 a         1791 c         1973 g         1384 t
ORIGIN      
        1 taccttatga acgtgtcccg cgggccgctc attgatgagc ccgcgttagt tgaggcgctg
       61 aagaaccggc agatcgccgg cgcggcgctg gatgttttca atgaggagcc gctgccggct
      121 gattcgctct tttgggagct cgataatctg ctcattacgc cacattcagc ggcagttaca
      181 gagaagctct gggaccgcca ctacgatttg attgtggaaa acatgagccg gtttctggca
      241 ggcaagccgc tgctcaattc cgtggacacg agacgcggct actgaacggt ggcgcggttc
      301 cacttcggat agaatttttc catgcagatt cagctcaacg gggaaagccg cgaggttgca
      361 gagggaatca cactcgccgc gcttgtggca cagcttggca tgaaggccga ccgggtggcg
      421 gtggaactga acctggagat cgtgccgcgt gccaagtggg aatccacggt gctgaaatct
      481 ggcgacagac tcgaggtggt gcacttcgtt ggcggcggga gttgattccc accccatcaa
      541 gggaaaaccg cccgcgatgg taaccccgtt acttcgggtc tccagtctta tgttcctcaa
      601 tctgaaagcg caggaattcg cggattgccg ccagcgcttc cgggttcgcg ctgctgattg
      661 ccacctgccc gccgttttcg atggtctcgt atttgtaact gatctcaccc tttaggcgcg
      721 tcaacgtcgg tacgccaggc ggcgtctggt catggacgaa catgggaata tcgaagtcgc
      781 cctgttgaaa cgcgctggcg atgtgctgga gatgcatcct gatctcggca atcgaatctt
      841 tgtcctttgc gttattggcg gtcacctgaa tggcgcctcc gtcttcggcg atcagaaaat
      901 ggtgcgtagt cttatcctgg ttgaagccca tccctgtgtc gccgcgctgt ttgagggcgt
      961 gatcgtgcga ggattgtgcc tgatgctgtg catgcatcgg acagtcactc atgtcgttgt
     1021 tcctatccgg ctttgcctgt gcgaacgcag caagagacgc gccgagcaag atacttgcga
     1081 gtgctgaaat tctcatttcc tgattcctct gctgttctga attttgcgct gcaatcccgg
     1141 cgagatcatt ggcgagattg cctcaatgct ctgcgggttt gaagctacga acaactccag
     1201 cagccctgct ctctttccgg gcgcggtcga ttgcaggcgt tgctcccagg tgcgtatcgc
     1261 ctttcggagc gttcgctgca agtccttcag ctcggcaatc cggctttcaa gtgcctgggc
     1321 cttttgcaac gcgagctcgt gaaccctctt gcacggcgct tctccgcgat cgcgctgggc
     1381 cagaatttct ttcagttcgt cgaccgtgaa gccgatcccc agtgcagccc ggatcagctt
     1441 gatgcgggcg agggccgccg gcgcgtaaca cctgtatcca ttcgcaaggc gctgtggttt
     1501 tggcagcagc ttcattcgct cgtagtaacg aagcgtatcg cggctgacgt gtgcgtgcct
     1561 tgccagctca cctgctctta aattcgacct ttcggagtca ttcgtcattc agtattctca
     1621 gcggtggagt atgttcccgg gtcaagcaga ttgtttgctc ttgcagactg tgcggccaga
     1681 ggaaagtgag cagacccggg tccggcaaca gttgtccagc ctttataatc aaagttttac
     1741 ccccgcatgt ttcaaaccac aggaaggtaa ctcttttggc gcttgatttt ttaggtgaac
     1801 ttcgtcgcac ccaccagtgc ggagagctgc gcgcggagaa cgcgggcgag caggttgtct
     1861 tgatgggctg ggtcaaccgc aggcgtgacc tgggtaatgt gatctttatt gacgtgcgtg
     1921 accgcaccgg cctgacgcaa tttgtgttcg ataaaagcga caacgccgcg ttgcatgaaa
     1981 aagccagcca gcttcgttct gagtatgtgg ttgctgcgat tggcaaggtg cgaaagcgtg
     2041 aagacaagac cgttaatcgc aaccttccga cgggcgagat agaggttgtg gccacagacc
     2101 tgaagctgct gaatgagtcc aaggtgccgc cattcctgcc cggcgacccg gcactggcga
     2161 atgaagagat gcggctcaag tatcgctata tcgacctgcg gcgcgagcct atgcagtaca
     2221 acattgagct gcggcacaaa gtggcgctgg ccatccggca atatctggcc gggcacggct
     2281 tctttgagat tgagacgccg ttcatgacgc gctccacgcc ggaaggcgcg cgagattatc
     2341 tggtgcccag tcgtgtgtat ccgggggaat tttacgctct gccgcaatcg ccacagttat
     2401 tcaagcagat cctgatgatc tccggattcg acaagtattt ccaaatcgtg cgttgcttcc
     2461 gcgacgaaga cctgcgagcc gacaggcagc cggagtttac gcagatcgat ctggaaatgt
     2521 cattcccgca gccggaccga gtctttgaag tcgttgaagg tttccttcag gcggcattca
     2581 aggtggctgg gtttgagttg aaagcgccgt tcccgcgtat gacttatgac gaggctatac
     2641 ggcaatatgg catcgataag ccggatctcc gcctgccaaa gctgaccgac gtgggcacgg
     2701 cctttgcggc cgagcagttg caaacgcttc agctcaatcc tgagctgccg gttgtggcga
     2761 ttcgcattcc taaaatcggc gagctctcac gcaaggagcg ggatgacaat cgcccgcttt
     2821 tcggggagcg caaagaagca cggctgattg acgacgttaa gcggctggaa aaatctttcc
     2881 cggaagcggt tgcgaaggtc cgcgagatgg ccggcgcgca gccggaagac ctgctggtgc
     2941 tggtgggtgg gccttcacag gcggaaaagt ctggtttgcg tccggactat ggtgtcttca
     3001 tggctgcggg acagttccgt gtggaactct cgcgcaagta tgctgaccgg cacatggcgt
     3061 ttcgccaggg gggattccac ttcacatggg tcacggattt ccccatgttt gagtgggacg
     3121 aaaacgataa gcgctggaat gcggcgcatc atccatttac ctcgccgcac gagcgcgaca
     3181 tggataagtt ggagtccgat cccggctcag tgcgtgcgct ggcctatgac gtggtgctga
     3241 atggaaccga gcttggctca ggatcaatcc gtatccatcg ccaggacatt cagaagaaaa
     3301 tcttccatgc tttgggtatg acggatgaag aggccaaatc ccgtttcggc ttcttcctgg
     3361 aggcgctgga atatggaacg ccaccgcacg gcggaatcgc gctgggactc gaccggattg
     3421 tgatgattct ggccggcgct gagagcctgc gcgaggtgat cccgttcccg aagactgcaa
     3481 aggcggtgga tctgatggtt gatgcgccaa cgccggtcag cgaggcgcag ttgcgggacc
     3541 tgggtatcaa gatccggtga gaattgtgaa atttgaagct tgagcgcagc gagagatccc
     3601 tatcgtttgc ttttcagaac ggtagggatt tttcgcattg ggatcacgcc gctgtgctca
     3661 cggtcgctct ttgacgctgc gcatcgcgct caatggttct ggaacccgcc cataagacga
     3721 tacccagccc gacggcgagc accggaacca cctgcatcgc ctgctgaagt ccaatcgcct
     3781 tgaacgcctc agttatgggc agagcgccgg ccgcgcgatg cgccataaaa tcgctgagcc
     3841 tgccagtgat taccgggccg aaggacgccc ctcccaaata catcacgagg aagtaaacgg
     3901 ccattgcggt cgcacgctgc gcgggggcca caatgtcctg tagcgaggcg tataccagcc
     3961 cgtaatacat gttgagcaaa ccataggcgg ctgtgagcag gggcacggca atcgccagcg
     4021 cgccaaagcc ctgccggatg ccgaggtatg ccaatggtgc ggaaatcaca gcggcatagg
     4081 cggccagcaa catgcgacca ttcgcgtgac ggcgaaccag ccggtctccc caggcgccgc
     4141 cgatggttcc tcccagaatt cctccaatgg cataaacaag tccggtggaa ataccggccg
     4201 acccgacctt gagatgatgg acgcgctgga aaaatgccgg cagaaaagtg cccaacgcgt
     4261 agaggttgaa gttgaccagc acgccggagg cgataatcca ggcgaaagtt ggcgtgagca
     4321 ggcccgacct tgagggcctc tgtgttgtgg ctgaagaagt ttcagaagct cctcgcagag
     4381 gttccgggag catgagcact acgggcgcga gcaacagggc ggggatggcg gcaacaatca
     4441 tcgccggacg ccagccgaat cgttgagcaa tgggaccgct aaaaaaaaag ctcagggctc
     4501 cgcctacggg aactcccagc atgaagagcg ccagcgggcg tgaacggcga ttcggagcga
     4561 aaaggtcacc aatccaactg gtggccaccg gtgcgcacac ggcctcaccc acggcgagtc
     4621 ccagacggga agccaccagc atggccaaac tgcgggccca tgccgccatt ccggtaacac
     4681 aaccccaaac cactattccg acggcaagca gtttcttccg gctgccagtg tccgcaagcc
     4741 ggccaatcgg gatgcctacg atggcataaa gaatggtgaa taccgtgctg atcaagccga
     4801 tttgcgaatc ggtaagtccg aactcatggc gcagaggctc ggccagggcc ccggccacgt
     4861 gacggtcata gaaattaatg atgttgacca ggatcagcac gatcagcgtt cggactgcaa
     4921 ttccggttgc gatgggggtg accgcgggtt tcgtagccat ggggaagaac tctatcagaa
     4981 tgcgcagtcg aataccgact aagtgggcgg gaaacgctcg gcgggaggtt atttgatcat
     5041 ggttttgagc agcgaatctg gttacaatgc tgaacattac ccgctgaaac cgggcggatt
     5101 cgcgagtgct cccctgtgcc cataaaagaa gttcacgtca ccggctatcg ttctgttcgc
     5161 gacctgaggc tcaagctgcg tcacatcaat atcctgaccg gacccaacgc ttcaggaaaa
     5221 accaatctct acaattcagt tttcctgctg gccaaggctg cggcgggtgg attcgcgcgt
     5281 gtgatcgccg aagagggtgg catggcgtca gtgctctggg ccggcgaacg caaaggcagg
     5341 gcactgcctt cggcgcggct ggagccggtg cgaatgggtt tgggcgtgaa gaccgatacg
     5401 ttcaattacg agatggtttg cggactgcct aagccttgtc gctcagcttt tgatcttgat
     5461 ccggaagtta aagaagaacg cgtctggatg gaagcgcagc gcggaatgaa ggtgacattt
     5521 ttcgaacgaa cggcagaacg ctcctggatt cttgaccgcg aagagcgcct ttccgattac
     5581 agcggagagc tgctgcccac cgagtctgtg ctctcgcagc tgcgcgaacc acacctatat
     5641 cccgagctct ccgcgctgcg ttcagagatg ggccagtggc gtttctatca ccacttccgt
     5701 accgaccatg agtcgccgtt gcggcatccg caggtgggtg tgcgcacgcc agtgctcagc
     5761 cacgatggcc gtgatctcgc cgctgcgctg cagacgatca ttgagatcgg ccaggaagaa
     5821 gacttgcacg aagccatccg gcaggcgttt cccggcgccg cgctggagat tgatcatgac
     5881 gaagaaagcg ggatgtttgc tgtgctgctg cgcatgcccg gattgaagcg tccgctgcgc
     5941 gcgcgagaac tttctgacgg gacgctgcgg tatctctgcc tgcttgcagc gctgctcagc
     6001 ccgcgtcctc ctgcactact ggcgttgaat gagccggaaa ccagcctgca tcctgatttg
     6061 ctggagccgc ttgctcacca gatggtgaat gcggccaaac actcccaact atgggtggtg
     6121 acgcattcac agaagctggc ggaattggtg gagaggtttt ccggtgaggg gccgatcaaa
     6181 ctggaactag tcggcggcga gacaaaggtc gccgggcaga agctggtgga gatggcggaa
     6241 gaagctggat agcctgctgg ccttttgggt gtttgaagga ctatttcaaa tgcttcagca
     6301 tctccttgaa caccggcgtg ccggattttc ccatcagctc gtacatcatc atttccgtgg
     6361 atgagatcac agcaccggaa tcgcgcatgc gatccacacc gattttccag ttgagctctg
     6421 accgggaact tatcgcgtcg gcagcgacat gcaccaggtg gccgttctct aatgcgccga
     6481 gcactgtctg agtaacgcag atgtgagcc
//
LOCUS       DASQYP010000229         4171 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_283998, whole genome shotgun sequence.
ACCESSION   DASQYP010000229 DASQYP010000000
VERSION     DASQYP010000229.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 4171)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4171)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4171
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_283998"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..221
                     /locus_tag="VE783_07455"
     CDS             <1..221
                     /locus_tag="VE783_07455"
                     /EC_number="2.3.1.234"
                     /inference="COORDINATES: protein motif:HMM:NF014426.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0002949 - tRNA threonylcarbamoyladenosine
                     modification [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     ATPase subunit type 1 TsaE"
                     /protein_id="HYX53272.1"
                     /translation="HIDLYRIDTQRELDTLALDDLMEPNTILLIEWGEKFERFVRERD
                     AEISIEHRGADDRTIVIDTGSPVSAQVT"
     gene            358..909
                     /locus_tag="VE783_07460"
     CDS             358..909
                     /locus_tag="VE783_07460"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53273.1"
                     /translation="MDEAAELMHQALNESQSRINRWLRRDYSKLPKYKQGLDLMSESG
                     IGSVASFAEMLRTPELKGSINYESAPDEMSRRRIVESVAGRRSAMLDRLELRQRKLIH
                     LQGRLLCYCPAENLACGAAEVQSLGFFDVDNTPPWDTWVAYSEGVLLSWVPGELVELV
                     NRGVQVNPEECIAWYDMRFPQSR"
     gene            complement(1015..1257)
                     /locus_tag="VE783_07465"
     CDS             complement(1015..1257)
                     /locus_tag="VE783_07465"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53274.1"
                     /translation="MVSPVKGRHKPDLKEESLSRTQIMIIYVLIDLLIVGAVLWAAFV
                     MRWPARQFFVPAALLFVLNGAWLVWMTIKHTPPGSH"
     gene            complement(1456..2223)
                     /locus_tag="VE783_07470"
     CDS             complement(1456..2223)
                     /locus_tag="VE783_07470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002487914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-ACP reductase"
                     /protein_id="HYX53275.1"
                     /translation="MLTMQGKNAVIFGVANKRSIAWGIAQALSSAGAKLAITYQNERM
                     KAEAHDLITSLPGAEAFQCDVSSDSEIDQLFAQLKERYGRLDALAHCVAYAPAEDLKG
                     EFVNTSREGFRIAHDVSAYSLIAVTRGAAPLMSEGGSVITLSYFGAEKVVAGYNVMGV
                     AKASLEASVRYLAYNLGPKKIRVNAISAGPIKTLAARGVGDFSAMLKNHAEHAPLKRN
                     VEVKEVADTALFLCSDLGSGITGETIYVDCGYNIMGF"
     gene            2907..3485
                     /locus_tag="VE783_07475"
     CDS             2907..3485
                     /locus_tag="VE783_07475"
                     /inference="COORDINATES: protein motif:HMM:NF016750.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53276.1"
                     /translation="MGLSRREFFKVGTGSAAALLLGFDARPALAQAKELKIARTTETR
                     STCPYCSVSCGVIIHTLGDKAKNVTAQVVHVEGDPDHPINRGTLCPKGASLYQDILNE
                     RRLLKPQVRRPGSTQWEDISWDKAYEEIARHIKKTRDESFIEQDANGNTVNRCETIGF
                     NGGCTDTNEFNYLVVKTMRSLGVCYLENQARV"
     gene            3507..>4171
                     /locus_tag="VE783_07480"
     CDS             3507..>4171
                     /locus_tag="VE783_07480"
                     /inference="COORDINATES: protein motif:HMM:NF012602.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-dependent oxidoreductase"
                     /protein_id="HYX53277.1"
                     /translation="MGPTFGRGAMTNGWVDIKNTDMMLIMGGNPAENHPCGFKWPVEA
                     KRTRNAKMIVVDPRFTRTAAVADMFCQIRAGSDIAFLGGVINYALQHDRVNKEYLVNY
                     TNASFIIKKGFKLPEDGLYSGYDPTAMKYDVSTWNYEEGGNMTGTAAAAIAAGDGPAT
                     SDASHAAAVPVAMNTQSSKAAGPRGAEGQGIQGMGPGSAKGMPGKPGAAPALPPNVAY
                     DTSL"
BASE COUNT          973 a         1092 c         1290 g          816 t
ORIGIN      
        1 ttcacatcga tctataccgc atagacacgc agcgtgagct ggatacgctg gcgctcgacg
       61 acctgatgga accgaatacg atcctgctga tcgagtgggg agagaagttt gagcggttcg
      121 tgagagagcg cgatgcggaa atttcaatcg agcatcgcgg ggccgacgac cgcaccattg
      181 tgatcgatac cgggagtccg gtttccgccc aggtgacgta agaacatgca acctgtcttc
      241 aacctggaac aaggtgaggc gagccgctct ctggatgaga ccgtggcatg gtgtacgcat
      301 cggcagctta cggctagtcc tctcgagggt cacgagataa agcggcgcct cgacgtcatg
      361 gatgaagcag cggagttgat gcatcaagca ttgaatgaaa gccagagcag gatcaaccgc
      421 tggctgcggc gggattattc aaaattgccc aagtacaaac agggactgga tctcatgtcc
      481 gaatccggga tcggctcggt agcttcattc gcagaaatgc tgcgcactcc cgagttgaaa
      541 ggatcgatca attacgaaag cgctcctgat gagatgagtc ggaggcgaat tgtggagtcc
      601 gttgccggca ggaggtctgc gatgcttgac cggctcgaac tccgtcaacg caagctaatc
      661 caccttcaag gaagactgct gtgttattgc ccggcggaaa atctcgcctg tggggcggcc
      721 gaggtgcaaa gcctcggttt tttcgatgtg gacaatacac cgccctggga tacatgggtg
      781 gcgtattcgg aaggtgtatt gctcagctgg gtcccaggcg aactggttga gttggtaaat
      841 cggggagtcc aagtgaatcc ggaagagtgc atcgcatggt atgacatgcg ctttccacag
      901 tccaggtgat cccaaacgag ggagaggcgg gccgcgccct acgccgtgat cgtatggttc
      961 gcgagcatcg atccgatcta gagtgatccc tcgcgtcgct cgggatttga aaattcaatg
     1021 agagcccggc ggcgtgtgct tgatggtcat ccagacgagc caggcgccat tgagaacgaa
     1081 cagcagcgcg gcggggacga agaattgtcg ggcgggccag cgcatgacga aggcggccca
     1141 gagaacggcg ccgacgatca gaagatcgat gagcacgtag atgatcatga tttgcgtgcg
     1201 ggacagagat tcctctttca agtccggttt gtgccgcccc ttaacggggc tcaccatcta
     1261 aatatcagaa tccccggggc tcgcgccccg ggcttgcact atgacgccct tcgggctggt
     1321 gcattgctca accgatgaca gactcggact ttcccgggct catcaggttt agagaatgca
     1381 gtacccgatt ctcgcacttg aaaccccatg atgtagtaac cgcagtcgca gtgcggaaac
     1441 ccagaagctc ctacttcaga agcccatgat gttgtagccg cagtccacgt aaatcgtttc
     1501 gccggtgatg ccggagccga gatcagagca aaggaacagc gccgtatcgg cgacttcttt
     1561 tacttccacg ttgcgcttga gcggagcgtg ttccgcgtgg ttcttgagca tggcactgaa
     1621 atcacccacg ccccgggcgg cgagggtctt tatcgggccg gcggagatcg cgttcacccg
     1681 tatttttttg gggccgaggt tgtaggccag atagcggacg cttgcttcga gtgaagcctt
     1741 ggccactccc atcacgttgt aaccggccac aactttttct gcgccgaagt agctaagcgt
     1801 gatcacgctt ccgccttcgc tcatgagcgg agcagcgccg cgggtgacgg cgatcaggga
     1861 ataggcgctg acgtcgtgtg caatacggaa gccttcgcgg ctggtattca cgaactcgcc
     1921 cttcaggtcc tcggcagggg cataggcgac gcagtgagcc agggcgtcga ggcggccgta
     1981 acgctctttg agctgggcaa atagctggtc gatctcggag tcgctggaga cgtcacactg
     2041 gaaagcctct gcaccgggta gcgaggtgat caggtcatgg gcttccgctt tcatgcgctc
     2101 gttctgatag gtgatggcca gtttcgcacc tgcgctgctg agcgcctgag caatacccca
     2161 cgcgatgctg cgcttgttgg cgactccgaa gatgactgcg tttttgccct gcatcgtcaa
     2221 cataagaaac gtccttttat gtgaaaccga aaaggataac agaaatggtt ttaccgcaga
     2281 gagcgcaggg ggcgaagagg aagaattgag agcttgacgg cgatacgaag aaagggcaaa
     2341 ataccgggag cgatgcctgt gaaaggaatt gacagctgaa aaaagaggtc accagggggg
     2401 cgtctggaag ttgggaacgg ccagaccttg aaacaggggg cgtcgcaatg ggaatgcgag
     2461 gtctagagat ccaggacgat tgggatggat tgggatcagg ttgggatgga tcgggatgaa
     2521 gaggttgatc acagtcggga tgaacccggg atgaggtcgg gatgacccgg gatgaattgg
     2581 gatgaacata gggggggcag agggggcttg aatcgccgga agcgccgtaa tcgcacggaa
     2641 tgaggcggca gattacgcaa agctaattag gaagttattg gagagccacg ctgaaccgat
     2701 tcagagacat tgatgcgctg gacgaagact accgagaacg ctcaccttag aatttaccta
     2761 tttacaaaca gcgactccgg ttctaagatt ctcggcattt ctgaggtgac ccttgaaccg
     2821 agggcacccg tctgtaagca caaaaaacta agccgagtgc tgaaatcgac tcaccggcca
     2881 tgatcgccca agaggaggca accgctatgg gcttgtccag acgtgagttt ttcaaagtag
     2941 gaaccggcag tgcagcagcg ctacttctag gcttcgatgc caggccggcc cttgcgcaag
     3001 cgaaagaatt aaagatcgcg cgcacaactg agacccgctc cacctgcccg tattgttctg
     3061 taagctgcgg cgtgatcatc cacacgctgg gcgacaaggc caagaacgtg accgcgcagg
     3121 tggtgcatgt ggaaggtgat cccgaccatc cgattaatcg cggcacgcta tgtcctaaag
     3181 gcgcgtccct atatcaagac atcctcaatg agcgccgcct gctgaagccg caggtgcgcc
     3241 gtcccggctc cacgcagtgg gaagacattt cctgggacaa ggcatatgag gagattgcgc
     3301 ggcacatcaa gaagacccgc gatgagagct tcattgagca ggacgccaac ggaaacaccg
     3361 tgaaccggtg cgaaaccatc gggttcaacg gcggctgcac tgacaccaac gaattcaact
     3421 atctggttgt gaagaccatg cgcagcctgg gggtctgcta cctggaaaac caggcccgtg
     3481 tttgacacgg tccgacggtc tccagtttgg ggcccacatt cggacgcggc gcaatgacca
     3541 atggctgggt tgacatcaag aacactgaca tgatgttgat catgggcggc aacccggctg
     3601 aaaaccatcc ctgcggcttt aaatggccgg ttgaggcgaa gcgcacacga aacgccaaga
     3661 tgatcgtggt ggatccccgc ttcactcgca cggctgcggt ggcggacatg ttctgccaga
     3721 tccgtgcggg gtcagatatt gccttcctgg gcggcgttat caattacgcc ctgcagcacg
     3781 atcgggtgaa caaggaatat ctggtcaact acaccaatgc ttctttcatc atcaagaagg
     3841 gattcaagct gccggaagac gggctgtatt ccggctacga tcccacggcg atgaagtatg
     3901 acgtttccac ctggaactat gaagaaggtg gaaacatgac cgggaccgct gctgccgcga
     3961 ttgcggcggg cgatggcccg gccacctcag atgccagcca cgctgctgcc gtcccggtgg
     4021 cgatgaatac ccagagctcc aaggctgccg gcccaagagg cgcagaaggc cagggaattc
     4081 agggcatggg gcctggatca gccaagggca tgccagggaa gccgggagcg gctcctgcac
     4141 tgccgcccaa tgtggcttac gacacatctc t
//
LOCUS       DASQYP010000230         5188 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_116522, whole genome shotgun sequence.
ACCESSION   DASQYP010000230 DASQYP010000000
VERSION     DASQYP010000230.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 5188)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5188)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5188
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_116522"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..241
                     /locus_tag="VE783_07485"
     CDS             <1..241
                     /locus_tag="VE783_07485"
                     /inference="COORDINATES: protein motif:HMM:NF015048.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hotdog domain-containing protein"
                     /protein_id="HYX53278.1"
                     /translation="LPPGWASVGAVVNVKHLAATPVGFTVTASARVVEVGDRMISFTV
                     EAHDGREKIGEGTHVRGLIDLQRFYGKMAQKSSPE"
     gene            complement(248..658)
                     /locus_tag="VE783_07490"
     CDS             complement(248..658)
                     /locus_tag="VE783_07490"
                     /EC_number="3.6.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012514.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(deoxy)nucleoside triphosphate
                     pyrophosphohydrolase"
                     /protein_id="HYX53279.1"
                     /translation="MKPDQKLRQVVAALIMRQGEILVCQRTKHQTMPLKWEFPGGKIE
                     PGEKPEDALHRELEEELGIRAKIGRHVETIRHVYNGGSAFELHFFLVEEFAGEIQNRI
                     FRDIQWAKKEALPRFDFLEADVELVRRLASGNVL"
     gene            complement(714..1706)
                     /locus_tag="VE783_07495"
     CDS             complement(714..1706)
                     /locus_tag="VE783_07495"
                     /inference="COORDINATES: protein motif:HMM:NF037020.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016209 - antioxidant activity [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="redoxin domain-containing protein"
                     /protein_id="HYX53280.1"
                     /translation="MIIEKGTVRAPEIGRVWFNSPPLSMRQLQGRVVLIDFWDYTCVN
                     CIRTLPYLKEWHARYQALGLTVIGVHSPEFLFARYELNVERGIQEFGLTYPIVIDSEM
                     ELWQAFANRYWPSKYLIDREGYLRYAHFGEGSYRETEQTIQQLLREINPLAELPPLME
                     AVRESDGQGAVCYQPSPELYLGHRRGRIGNPGEFVEDEAADYSWSGEMREGYFYAEGR
                     WTATGDHFESASDQPARVSLTYSASGANAVMASFNREPRELEIRQDGNPLERAVATPD
                     ILFRDGRSYVRVARPRMYSLVDNRDFGTHTLELITHQPELALFAFTFTTCVKPA"
     gene            complement(1762..2589)
                     /locus_tag="VE783_07500"
     CDS             complement(1762..2589)
                     /locus_tag="VE783_07500"
                     /inference="COORDINATES: protein motif:HMM:NF013648.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helical backbone metal receptor"
                     /protein_id="HYX53281.1"
                     /translation="MPEIRIVQRVVSLQPSITVTLRDLDLLHHLAACTKYCIDLCPEL
                     NEREVARVEDSWSADVQQILAAKPDLVIASVPYRMESLAEIMKAGVPCLCLAPKSLAD
                     VFHDILHIARIMGAEHRGLALVGRVEQAIDAVRRRTHALQRPLVYCEEWGKPLILSQR
                     WVAELVEAAGGKFLGEPGRQITEEEVAAANPEVIVASWCGAGDRVPLEKLAVRKGWSQ
                     TRAVQSGRVYCINDEFLNTPASTLVNGLNALCAAIHPQKFPVAKGLRQINSPEAVSA"
     gene            2655..3035
                     /locus_tag="VE783_07505"
     CDS             2655..3035
                     /locus_tag="VE783_07505"
                     /inference="COORDINATES: protein motif:HMM:NF013738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster assembly scaffold protein"
                     /protein_id="HYX53282.1"
                     /translation="MPYSPQVLEHFENPRNAGELAEADAEAKLEHPVCGDVMRFAVRL
                     QDGRIAESRFLVRGCVASIAAGSCLTEMVNGKSISEASQLTREQLVEALGGLENASMH
                     ASHLALDVLKQVLAKLTGPAATHR"
     gene            3168..4040
                     /locus_tag="VE783_07510"
     CDS             3168..4040
                     /locus_tag="VE783_07510"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53283.1"
                     /translation="MLAFIALLIFSITPLVMPGAGINGVKIVTRQVSGGMTDVRTEYM
                     TPDKLRSEWQTPIGDKSGPAMASIVYRGERERVYVLDLQAHEYITYEHGSPAINTHSM
                     PSSGGVLRILIEYIDTGERKVIFGHMARHVLTHEKRYVTAGACSQPSESETDGWYIEP
                     SVMPDWRQKKNGVGVVVASVVSTSPSNRCQDKTDHVEVHVTGAEPGFPVKVSTTLKSQ
                     IPGRDGTSRPLESTWGSEVVEMKEGPLDPALFDIPGDFKLVQSLRNWAVASTPKRELA
                     GWEWVKAKLQEMFH"
     gene            complement(4053..4775)
                     /locus_tag="VE783_07515"
     CDS             complement(4053..4775)
                     /locus_tag="VE783_07515"
                     /inference="COORDINATES: protein motif:HMM:NF012905.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="haloacid dehalogenase-like hydrolase"
                     /protein_id="HYX53284.1"
                     /translation="MKTHNILSISAQQFIDSVLALKPAIAVFDCDGTLWSGDSGADFF
                     YWEVEQGLLPQNVVDWALSRYDDYKRGNVDESMMCGEMVTIHHKLPEERLVKAAHEFF
                     PSIVAPRIFPEMLQLTHELREQGCELWAVSSTNVWVVREGVKQFGVPPERVLGACVHI
                     EEGLATDRLHRVPSGPGKATAINEVLGRTVDACFGNSVHDLEMLKIARNPFAVNPNAD
                     LEKIARERSWRIYWPEGTQSQS"
     gene            complement(4772..>5188)
                     /locus_tag="VE783_07520"
     CDS             complement(4772..>5188)
                     /locus_tag="VE783_07520"
                     /inference="COORDINATES: protein motif:HMM:NF024214.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NTP transferase domain-containing protein"
                     /protein_id="HYX53285.1"
                     /translation="ANAGFLTINPSPEQGQFNSLRVGLEEVLNRGRDAAIITLVDRPA
                     PAYAVVEQLKTVFLSSGEQTWAVVPEYAGKHGHPIVIGREMIEAFLRAPATSTGRDVE
                     HANQDHITYVAVDDPLVTMNVNTEEEFEKLRLGMTV"
BASE COUNT         1126 a         1536 c         1464 g         1062 t
ORIGIN      
        1 tcttccgcct ggatgggcat ccgtgggcgc agtcgtgaac gtgaagcacc tggcggcaac
       61 tccggtcggg ttcactgtga ctgcgagcgc cagggtagtt gaggtcggcg accggatgat
      121 cagcttcacc gtggaagcgc acgatgggag ggaaaaaatt ggcgagggca ctcatgtgcg
      181 cggcctcatt gatctgcaaa gattctatgg aaaaatggcc caaaagagca gtccggaata
      241 agccaggcta aagcacgtta cctgaggcaa ggcggcgaac aagttccacg tcggcttcca
      301 gaaaatcgaa gcgggggaga gcttccttct tcgcccattg aatgtcacgg aagattcggt
      361 tctggatttc cccagcgaac tcctcgacca ggaagaaatg aagctcgaag gcgctgccgc
      421 cgttgtagac atgccggatt gtctcaacat ggcggccgat cttcgcccgt atgcccagct
      481 cctcttccag ttcgcgatga agcgcatcct cgggcttctc tccgggctca atcttgccgc
      541 cgggaaactc ccatttcagc ggcatggtct ggtgcttggt gcgctggcag acgagtatct
      601 cgccttggcg cataatcagc gcggcgacca cttgcctgag cttttggtct ggtttcatcg
      661 atctcgtcgg cagaagtaaa aatcatacaa gaagagcatc tctcggcacg gcttcaggcg
      721 ggcttcacac acgtggtaaa cgtaaatgca aagagcgcga gctccggttg atgcgtaatc
      781 agctccaacg tgtgcgtccc gaaatcacgg ttgtcaacca gcgagtacat ccgcggacgc
      841 gccacccgca cgtagctccg gccatcacgg aacagaatgt ccggcgtggc gaccgcacgt
      901 tcgagcggat taccatcctg ccggatctct agttcgcgcg gctcgcgatt gaaagatgcc
      961 ataaccgcgt tagcgccgga cgcagaatat gtcagcgaca ctcgcgcagg ctgatcagag
     1021 gcagactcga agtgatcgcc cgtggccgtc cagcggccct ctgcatagaa gtatccttcg
     1081 cgcatttcac cggaccacga gtagtccgcc gcctcgtctt ccacaaactc gcccgggttg
     1141 ccgatgcgcc cacgccgatg tccaagatac aactctggcg atggctgata acacacggcg
     1201 ccttgcccgt cactctcgcg aacagcttcc atcaatggcg gcaactcggc gagcgggttg
     1261 atctcgcgca gcaactgctg aattgtctgt tcggtctcgc gatagctgcc ctcgccgaaa
     1321 tgggcatagc gcaggtaacc ttcgcggtcg atcaggtatt tgctcggcca gtaccggttg
     1381 gcaaatgcct gccacagctc catctcgcta tcgatcacga ttggatacgt gagcccaaat
     1441 tcctggattc cgcgctccac attgagttcg tagcgggcga aaagaaactc cggcgagtgg
     1501 acaccgatca cggtcaggcc cagagcctga tatcgtgcat gccattcttt gagatagggt
     1561 agcgtgcgga tgcagttcac gcaggtatag tcccagaaat caatcagcac cacgcgcccc
     1621 tgcagctggc gcatgctgag gggcggagag ttaaaccaca cgcgtccgat ttccggcgcg
     1681 cgtaccgtgc ctttttcgat gatcaagaga ggtcaaactc caggaactgt cgtcagtgaa
     1741 agattgtaag caccaggaaa cctacgcgga cacggcttcc gggctgttga tctgccgcag
     1801 tcctttagcg acggggaact tctgcgggtg gatggcggcg cagagcgcgt tcaatccatt
     1861 cacgagcgtg cttgctggcg tattcaggaa ctcgtcatta atgcagtaaa cccggccact
     1921 ctgtacggcc ctggtctggc tccagccttt acgaacagcc aatttttcca gaggaacgcg
     1981 atcgccggcg ccgcaccaag atgcaacgat tacctccgga tttgcggcag caacttcttc
     2041 ctccgtaatc tgccgtcccg gctcgcctag aaatttcccc ccggcggctt ccaccagctc
     2101 cgccacccag cgctgcgaga gaatcagcgg cttgccccac tcttcgcaat aaaccagcgg
     2161 ccgctgcaga gcgtgcgtcc ggcgtcggac tgcgtcaata gcctgttcaa cccggccgac
     2221 cagcgccagc ccgcgatgct ccgcccccat gatgcgggcg atgtgcaaga tgtcatgaaa
     2281 aacgtccgcc agcgattttg gcgccaggca gagacacgga actcccgctt tcatgatctc
     2341 ggccagagac tccatgcggt aaggcaccga tgcgattaca agatcaggtt ttgccgcaag
     2401 gatctgctgt acgtctgcgg accatgagtc ttccactctc gcaacttctc gctcgttcag
     2461 ctcaggacaa aggtcaatgc agtatttagt acacgctgcc agatgatgca gaaggtccag
     2521 atcgcgcagg gtgaccgtaa tgctcggctg gagagaaaca actcgctgca caatgcgaat
     2581 ttctggcatg atgaaattat aagtcggtgt agacgggttt ccggagtgac tgccgacaca
     2641 gctgcttgaa agcaatgccc tactcacctc aggtgctgga acatttcgaa aatccgcgca
     2701 atgccgggga gcttgccgag gcggatgccg aagccaagct ggagcacccg gtctgcgggg
     2761 acgtgatgcg gttcgccgtc aggctgcagg atggcaggat cgccgaaagc cgcttccttg
     2821 tccggggatg cgtagcctca attgccgccg gctcatgcct gaccgaaatg gtcaacggca
     2881 aatccatctc tgaagcatct cagctgactc gtgagcagct ggtggaagca ctgggcgggc
     2941 tggaaaatgc gtcaatgcac gcaagtcacc tggcgctgga cgttctgaag caggtgctcg
     3001 ccaaactgac cggacctgca gcaactcacc ggtaagctgg cgcaagttgc cggacatccc
     3061 acgagtactt tttgcattcc gacttgaata atttggggtc aaaacgcctc ttgcggcgtt
     3121 aaaatgattc cccattccgc cgccccggcg cccagaggag ggtcaacatg ctggcattca
     3181 ttgcgctgct gattttcagt atcactcctc ttgtcatgcc tggcgccgga atcaacggcg
     3241 taaagattgt tacgcggcag gtctccggcg gaatgacgga tgtccgcacc gagtacatga
     3301 cgccagataa gttgcgaagc gaatggcaga ccccgatcgg tgacaagtcc ggtcccgcca
     3361 tggccagcat cgtttatcgc ggagagcgcg agcgcgtgta cgttctcgac ctgcaggcgc
     3421 atgaatacat cacgtatgaa cacgggtcgc ccgccatcaa tacgcattcc atgcccagct
     3481 caggcggggt ccttcgtatc ttgatcgagt acattgatac cggcgagcgc aaagtgattt
     3541 tcggccacat ggcgcgccat gtcctcacgc atgaaaaacg ctacgtcaca gcaggtgcgt
     3601 gctctcaacc gtcagaatct gaaactgacg gctggtacat agagccctcc gttatgcccg
     3661 attggcgcca gaagaaaaac ggagttggcg tcgtggtggc ttcggtggtc tccaccagcc
     3721 cttcaaatcg ctgtcaagac aagacggacc atgtggaagt acacgtgacc ggcgccgagc
     3781 ctggcttccc ggtgaaagtc tctacaaccc taaagagcca gatacccggc cgcgatggca
     3841 caagccgtcc tcttgaatcc acctggggtt cagaagtagt agagatgaaa gaaggcccgc
     3901 tggatcccgc cctgttcgac atccctggag acttcaagct ggtgcagagc ctccgcaact
     3961 gggctgttgc cagcactccc aagcgcgagc tggccggctg ggagtgggtg aaggccaagc
     4021 ttcaggagat gttccactaa gccgccgcac aatcaggact gtgattgagt gccttccggc
     4081 cagtaaatcc gccagcttct ttcacgcgca attttttcga ggtcagcatt cgggttcacc
     4141 gcaaatggat tgcgggcgat cttgagcatc tcgagatcat ggacggagtt gccgaagcac
     4201 gcgtcaacgg tccgacccag aacttcgttg atcgcagtcg ccttgcccgg cccactaggg
     4261 acgcggtgca gccggtcagt tgccagcccc tcttcaatgt gaacgcaggc gccaagtacg
     4321 cgctccggag gtacgccgaa ctgcttcacc ccttcacgca ccacccaaac attggtcgag
     4381 gataccgccc ataattcgca gccctgctcg cgaagctcgt gcgtcagttg cagcatctcc
     4441 gggaagattc ggggagcaac tatacttggg aaaaattcgt gcgcggcttt caccagccgt
     4501 tcttccggca gcttgtgatg aatggtgacc atctctccgc acatcatgct ttcatccacg
     4561 ttgccgcgtt tgtaatcgtc atagcgggac agcgcccagt cgaccacgtt ttgcgggagc
     4621 agcccctgtt ccacttccca atagaaaaag tcggcgccgg agtcaccgct ccagagcgtg
     4681 ccgtcgcagt cgaatacggc aatggccggc ttcagcgcca ggaccgaatc aataaattgt
     4741 tgagcggata tagacaggat gttgtgggtc ttcaaaccgt cattcctaag cggagctttt
     4801 cgaactcctc ttctgtattt acgttcatgg ttaccagcgg atcatcaacg gcaacgtagg
     4861 tgatgtggtc ctgattcgca tgttcaacat cgcggccggt gctggtggcc ggtgcgcgaa
     4921 ggaacgcctc aatcatctcg cggccaatca caatgggatg gccatgtttt ccagcgtatt
     4981 caggaactac cgcccaggtc tgctcgcctg aggaaaggaa cacggtcttg agttgctcca
     5041 ccacggcata agccggcgca ggacggtcca caagggtgat aatggccgca tctcgccccc
     5101 ggttaagcac ttcttccagc cccacccgca gtgagttgaa ctgtccctgt tccggagacg
     5161 gattgatggt gagaaagccg gcgttggc
//
LOCUS       DASQYP010000231         8649 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_227316, whole genome shotgun sequence.
ACCESSION   DASQYP010000231 DASQYP010000000
VERSION     DASQYP010000231.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 8649)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8649)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8649
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_227316"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..225)
                     /locus_tag="VE783_07525"
     CDS             complement(<1..225)
                     /locus_tag="VE783_07525"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HYX53286.1"
                     /translation="MSTNAPPLSSPTDSSSAKPLLRLESVTAFYGDLQALFGITLNVF
                     AGEIVTLIGANGAGKTTTLRVISGLKRPSTG"
     gene            complement(222..959)
                     /locus_tag="VE783_07530"
     CDS             complement(222..959)
                     /locus_tag="VE783_07530"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HYX53287.1"
                     /translation="MAAILELRNVSKRFGGLRAVKNVSFQMRENEILFVIGPNGAGKT
                     TVFNLISGFLHPDEGCITFSGRDISQTPPHEAARLGIGRTFQIVKPLPTLTVQQNVML
                     GAFMHTRRVSQAEDEADKILDFLQMSHLRNSQARGLPLAALKRLEIARALATKPKLIL
                     LDEVVSGLTTAEALALADLIKRLPEWNVGVVGGVEHVMQVVMKISDHIVVLDYGAKIA
                     EGKPEEVVNEPAVIEAYLGPKYKELAR"
     gene            complement(963..1955)
                     /locus_tag="VE783_07535"
     CDS             complement(963..1955)
                     /locus_tag="VE783_07535"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HYX53288.1"
                     /translation="MRELRGRKLLLLVFAVAVSSFPALLVANNYLLQVFFRIALFAAL
                     GLAWNLVGGYAGQLSLGHVAFFGIGAYGLAIMAAHSVPVWIAVFLAALLATLVAALIG
                     KIVFRLRGPYFTLATIACGEVLRLTATNLSITNGAIGLSVPVFFTGPWVWKFYYLAAV
                     ALSTACFFVNFWTANSRFGYYLMAIREDEETASAVGVDAANYKLRSLLLSAFLTGLGG
                     ALYGSAFQYIVPDSILSIDVSIQMAIIAMLGGAGTLLGPIVGAVLLLSAAEIFKTQFQ
                     ESHLLIYGVLIVLVVLFLPEGIVGSLEQRLRHRKDVSKKPSTAAPAPSAVERDN"
     gene            complement(1952..2818)
                     /locus_tag="VE783_07540"
     CDS             complement(1952..2818)
                     /locus_tag="VE783_07540"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HYX53289.1"
                     /translation="MTQFLQASMNGLLTGALYALIGMGLALIFGVMRIVNFAHGAFLM
                     VGMYVTYLLFDRLKINPYYGFIAAGIFLFAFGYLVYKLLILPIRDRSDFMQILMTTGI
                     ALILVDTAQLAFGADYRQANIALVNRAVHVGPFTLNAASLLSFAIAAVFIVGLREFVV
                     RSRTGQALRAIAQNRDVAPLMGINVIRIQGVSFALGIALAGIAGGLLLPALYLFPSVG
                     EDYTLKAFVIVVLGGMGSIEGAAIGGLVLGVSESLTSTYIGNQWALAIDFVLFLLMLS
                     LKPSGIFGSQRA"
     gene            complement(2836..4032)
                     /locus_tag="VE783_07545"
     CDS             complement(2836..4032)
                     /locus_tag="VE783_07545"
                     /inference="COORDINATES: protein motif:HMM:NF024825.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HYX53290.1"
                     /translation="MRFVTVGRVIFLAVALLLFVGCQKNTTQSVRIGAITSLTGSQAA
                     FGEAHRNGYAIALDEINSRGGVLGKKLELDVYDDQSKPEQAVQGVSKLVDQDRVPILL
                     GAYSSENTKAIVPAVSQRQLPLIIPTATADNVMDSKSPWVFRICAGANDYARETLNFL
                     KANAAPKKIAIVYENTNFGQANRKSMEAAAKDAGMEVVAVESYEAKFPDYKPVLQRVK
                     QANPDVIYFCSYLLDASTLMRQSREIDLNPKYYTSAGTGFAAAEFPTSKGAGANADYT
                     FSVSQWLPAVQWPGSKDFDAEYFKRFNSHPAYHAIQAYAALLVAAEAINKAGSLDGAK
                     IRDSIKALDLPSSAFGPIHFDFNGQNQHPVLITQVQGGQYKIVFPQSAADAKPIIPAP
                     RWSERK"
     gene            4415..5842
                     /locus_tag="VE783_07550"
     CDS             4415..5842
                     /locus_tag="VE783_07550"
                     /inference="COORDINATES: protein motif:HMM:NF024827.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c3 family protein"
                     /protein_id="HYX53291.1"
                     /translation="MNTLLKSLLYMVLIGSPLMMRAGEHPVPLDKNVDAAKCLECHED
                     KTKGPHVHSAIQMGCTSCHEVRTVKDVTRIKLTATSSAKLCLTCHADKNAAELKGKVH
                     PPAVRDCVKCHEPHQSKNDKQLLKPVSGDKQENLCLSCHTTGLNVAAKGSKHAALDMG
                     CDTCHTVHKTGDPTKQEFANHLKKTTPQLCLDCHDAKDAGLQKAHSDQPFAKADCVQC
                     HNPHQSDGPKLMQAVVHSPFDGGKASCSTCHEPMKDGKIKLTAASPKELCLTCHTDKA
                     EQIDKAKVQHPGAMGDCTDCHNPHASKTAGLPKPDAVNVCLSCHTDQAGLRDKKHLHQ
                     PAFEQGCTTCHQPHGSENAHLLRAANTNALCLECHGPDANPGKLEKEHKITLFEGSVK
                     LPEDYFSKVPILPLQYNAGHPVDRHPVSDAMDLKTKTMVPINCLTCHQPHAGNETGML
                     VKDQAPNMAFCKNCHKEGTIQALKK"
     gene            5848..7146
                     /locus_tag="VE783_07555"
     CDS             5848..7146
                     /locus_tag="VE783_07555"
                     /inference="COORDINATES: protein motif:HMM:NF020039.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SMP-30/gluconolactonase/LRE family protein"
                     /protein_id="HYX53292.1"
                     /translation="MIKETNMLKQQSHSTGRSRSTWLWVALLLVSLAGTSAFADKKPK
                     PSTNGKPQPERIRASVNRDLLVWPNPPAIARIKWLDQFTGEPFDASILTPSKKKKQGW
                     MDRLAGAQPDGAVDVKIPYQLIRPYGITVDSKGKIYTADEGVDAIFIFDPQTKAVELI
                     RNGHEAHFGLINGLAIDDNDRLFVTDGRLRQVLVFNAKHQQDGAFGADVLARPGGIAL
                     DRENRFLYVVDTENDQVVVFDADSFKVLRRIGVSGKKHTLTAPGTFSLPTNVALDREG
                     NVYVTDTLNNRVQIFDPEGNFISMFGKHGDGPGYFARPKGIAVDSDGHIWVVDTYQDR
                     VQVFNREGRLLIYVGGHGGYPGQFADSYGIAISKDNHVIVSEQYPGRLQMFQYVTDNE
                     AEQARKKQTNEPEQQGQKPAPASTKQNDNAVSKPQGAGAQ"
     gene            7245..8132
                     /locus_tag="VE783_07560"
     CDS             7245..8132
                     /locus_tag="VE783_07560"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53293.1"
                     /translation="MKKLFVIMLFITVGVSMSYAQDVLGAHLVYGRGCVACHAPHSGA
                     AGNGGSNANSPYSGNNALWGQDLSPLYGKTLQFGDSRGNWTITLPNYGPASSGGSKPG
                     PFDQFGGPFAVIACLSCHDGNLAKPAMMKGTTVETLPNSAVSGGHAPTFLGNDGTTPG
                     NYNNDHPVGPNALLTCGGTFDWDCTVNANGTYSYTGTGSAQFLLDYFDVTKTGPVAHL
                     VSTSSTQGGWVTCTTCHDQHSMTVFSTDGTVANNKPTMFFVRGWYNPNSGNSAAQFCR
                     SCHGGESNEMHGVTLATLP"
     gene            8206..>8649
                     /locus_tag="VE783_07565"
     CDS             8206..>8649
                     /locus_tag="VE783_07565"
                     /inference="COORDINATES: protein motif:HMM:NF025010.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SurA N-terminal domain-containing protein"
                     /protein_id="HYX53294.1"
                     /translation="MKHQFIASALLLFCGISLSAQHTVFQKEATLQVTGKAVAKVNGT
                     ELSDRDLLREMYAIFPYARQHNGAFPQAMEADIRKGALKMIEFEELVYQEALRRKMTV
                     LPARLNKAEQDFRKQFHTPEQYQTFLKAECQGQEKVLRARIRRSLL"
BASE COUNT         2021 a         2469 c         2528 g         1631 t
ORIGIN      
        1 tcccgtcgat ggacgcttca atccggagat gacgcgtagt gtcgtcgtct tgcctgcccc
       61 gtttgcgccg atgagagtga cgatctcgcc ggcaaatacg ttcagagtga ttccgaagag
      121 cgcctgcaag tcgccgtaga aggcagttac actctccagg cggagcagtg gcttagccga
      181 ggagctgtcc gtgggcgagc tgagcggcgg agcgttggtg ctcatcgcgc cagctccttg
      241 tacttcggtc cgagatacgc ctcgattacc gcaggctcgt tgaccacctc ttccggtttg
      301 ccttcggcga tttttgcgcc gtagtcgagc accacaatgt ggtcagagat tttcatcacc
      361 acctgcatca cgtgctccac cccgccgacg actcccacat tccattccgg cagtcgcttg
      421 atcaagtcgg ccagggcaag cgcttcggcg gtggtaagac cggagacgac ttcgtcgaga
      481 agaatgagtt tcggtttggt cgccagggcg cgcgcgatct ccagtcgctt gagcgcagcc
      541 agcggtaacc cgcgcgcctg agagttcctg agatgcgaca tctgtaggaa atcgagaatt
      601 ttgtcagcct catcctctgc ctgactcacc ctgcgggtgt gcatgaaggc gccgagcatc
      661 acgttctgct gaacggtcag agtcggcagc ggttttacga tttgaaaagt tcggccgatc
      721 cccagccgcg ccgcttcatg cggcggagtt tggctgatgt cgcggccgct gaaggtgatg
      781 cagccctcat cgggatgcag gaagccgctg atcaggttga agactgtggt tttgccggcg
      841 ccgttcggcc cgatgacgaa cagaatctcg ttctcccgca tttggaagga gacattcttc
      901 accgcgcgca atccgccgaa gcgctttgac acattgcgaa gctcaagaat tgccgccata
      961 tttcagttgt ctctctcaac agcggaagga gcaggagcgg ctgtggaggg ctttttactc
     1021 acgtccttcc tgtgacgcag gcgctgctcg aggctgccga cgatcccttc cggaaggaaa
     1081 agcacgacca gcacaattaa cacgccatat ataaggaggt ggctttcctg aaactgagtc
     1141 ttaaaaatct ctgcggcgct cagcagcagc acagcgccaa cgatcggtcc aagcagggta
     1201 ccggcgccgc cgagcatggc gataattgcc atctggatag agacgtcgat gctcagaata
     1261 ctgtcgggca caatgtactg aaaggcgctg ccgtagaggg ctccgcccag accggtgaga
     1321 aaggcgctca gcagcagtga tcggagcttg tagtttgccg cgtctacgcc aacggcgctg
     1381 gccgtttctt cgtcttcgcg aatggccatc aagtaatagc cgaagcgaga gttggcggtc
     1441 cagaagttca cgaagaagca ggccgtggac agagcgacgg cagcaagata gtagaacttc
     1501 cagacccacg gaccggtgaa gaagacgggt acgctgagcc cgatggcgcc gttcgtgatg
     1561 ctgagattgg tggcagtaag gcgaagcact tcaccacagg cgatggtcgc gagcgtgaaa
     1621 taaggtccgc gcagccggaa gacgatcttg ccgatcagcg cggctaccag tgttgcaagc
     1681 agcgccgcca gaaacaccgc gatccacacc gggacggaat gcgcggccat gatcgccagc
     1741 ccatatgcgc cgattccaaa gaaagccaca tgccccaggg aaagctgacc ggcgtaaccg
     1801 cccaccaggt tccatgcaag gcccagagcg gcaaaaagag cgattcgaaa gaagacctga
     1861 agcaggtagt tgttcgccac caggagtgcg gggaatgagc tcacggcaac agcaaaaacc
     1921 agcaggagca gcttcctccc tctgagctct ctcatgcgcg ttgactccca aagatgccgc
     1981 tgggcttgag cgagagcatg agaaggaaca gcacaaagtc gatggccaaa gcccactgat
     2041 tgccgatgta agtactggtc aggctttctg aaaccccaag caccagcccg ccaatggctg
     2101 cgccctcaat cgatcccatt cctcccagca ccacaatgac aaaagctttg agcgtgtagt
     2161 cttcgccgac gctggggaag agatacagcg caggcagaag aaggccgcca gcgatcccag
     2221 ccagcgcaat cccaagagca aagctgaccc cctgaatacg aattacattg atgcccatga
     2281 gaggagccac gtcccggttc tgggcaatgg cgcgcagggc ctggccggtg cggctgcgca
     2341 ccacaaactc gcgcaggcca acgatgaaca ctgccgctat ggcgaatgag agcagggaag
     2401 ccgcattgag cgtgaacgga cccacatgta cggcccgatt gacgagcgcg atgttggcct
     2461 ggcggtagtc ggcgccaaag gcgagctgcg cggtgtccac caggatgagc gcgattccgg
     2521 tggtcatcag aatttgcatg aagtccgagc ggtcgcgaat cggcaggatg aggagcttgt
     2581 aaaccagata gccgaacgcg aaaagaaaga ttccggcagc gatgaatccg tagtaagggt
     2641 tgatcttcaa acggtcgaat agcaggtaag tcacgtacat gccgaccatg agaaacgcgc
     2701 cgtgggcgaa gttcacgatg cgcatcacac cgaagatcag cgccagcccc atgccaatga
     2761 gggcgtaaag cgctccggtg agcagcccgt tcatggaggc ctgcaggaat tgagtcaagg
     2821 ccgggccctc atcttctatt tgcgctcact ccagcgcggc gctgggatga tcggcttcgc
     2881 atccgccgcg ctctggggga agacgatctt atattggccg ccctgcacct gcgtgatcag
     2941 caccggatgc tgattctggc cgttgaaatc aaaatggatt ggtccgaatg cgctggaggg
     3001 aaggtcgagc gccttgatcg aatcgcggat cttcgcgccg tccagcgatc cggctttgtt
     3061 gatggcctca gccgctacga gcagggcggc ataggcctga atggcgtggt aggcgggatg
     3121 agagttgaag cgcttgaagt attcggcgtc aaaatctttt gatcctggcc actggactgc
     3181 gggcagccac tgggagacgg agaatgtgta gtctgcgttt gcgccggcgc ctttcgaggt
     3241 aggaaactca gcggcggcaa agccggttcc cgcggatgtg tagtatttcg gattcaggtc
     3301 aatctcccgg gactggcgca tgagcgtgct tgcatcgagc aggtaagagc agaagtaaat
     3361 cacgtcaggg ttggcctgct tcacgcgttg cagcacgggc ttatagtcgg gaaatttcgc
     3421 ctcgtaggac tcgacggcca cgacctccat tccagcatct ttggctgccg cctccataga
     3481 tttgcggttc gcctggccaa agttagtgtt ctcataaacg atggctattt tcttcggtgc
     3541 ggcgttcgct ttgaggaaat tgagtgtctc ccgcgcgtaa tcatttgcgc ctgcgcaaat
     3601 gcggaacacc cagggagact tcgaatccat cacgttgtct gccgtggcag tgggaatgat
     3661 gagcggaagc tggcgctggc ttacggctgg aacaatcgcc ttggtgtttt cgctggagta
     3721 ggcacccagg agaatcggca cacggtcctg gtccacgagc ttggagacgc cctgcactgc
     3781 ctgctcaggc ttgctttgat cgtcgtagac atcaagttcc agcttctttc ccagcacgcc
     3841 gcctctggaa ttgatttcgt caagcgcgat ggcataccca ttacggtgcg cttcgccaaa
     3901 ggcagcctgg cttccggtga gcgaggtgat tgcgccgatc cgaacgctct gcgtagtgtt
     3961 cttctggcaa ccaacgaaga gcagtaatgc aacggcgaga aaaatcaccc gtccaacggt
     4021 tacaaatcgc acgttacctc caacgagagc ctatccagag taaaagacgc aacgaattat
     4081 acgcagagta tgccgcgtcg gcagcgtgat agtggctgtt tctaatcacg gcaatcagcc
     4141 gggactcaac tgaaaacaga gaaccatccg ctgagcagtc ctgcagtgaa gtttctttgc
     4201 gcctgccgtg ctctcctggc gctttctacc ttagcgattg cgcgcgatcg cgtcatttcg
     4261 ctcagggccg aaaggttggg tgatcacgct cacaaaatgg cgtgaccagt gtcacagttc
     4321 ttttgttcag aaaggacgag actccatttt gatcactttc aggctgccca gatcgtacgg
     4381 gtgatggcca gaaaaaacag ggtcccccgg cattatgaac acgttgctta aatcgctgct
     4441 ctatatggtt ctgatcggct cccccctgat gatgagggca ggtgagcatc cggtacccct
     4501 ggataagaac gtggatgcag cgaagtgcct ggaatgccat gaagacaaga ccaaaggccc
     4561 gcacgtgcac agtgcgatcc agatgggttg cacgagctgc cacgaggtcc gtacggtaaa
     4621 ggacgttacc cgaatcaaac tcacggcaac ctccagcgcc aagctttgcc tgacctgtca
     4681 tgccgataaa aacgcggcag agctgaaagg gaaggtacat cctccggcgg tacgcgattg
     4741 cgtgaaatgc cacgaaccgc accagtcaaa gaacgataaa cagttgctga aaccggtttc
     4801 cggagacaag caggaaaatc tttgcctgag ctgccacacc accgggttga atgtcgccgc
     4861 caaaggcagc aagcacgccg ccctggatat gggctgcgat acctgccaca ccgtccataa
     4921 aacgggcgat cctaccaagc aggagttcgc gaatcacctc aagaaaacga cgccccaact
     4981 ttgcctcgat tgtcacgacg ccaaggatgc tgggctgcag aaggcgcata gcgatcagcc
     5041 tttcgcaaaa gccgattgcg tgcagtgcca taatccacac cagtctgacg gtccgaaatt
     5101 aatgcaggcg gttgtacatt cgccgttcga tggcggcaag gcctcctgca gtacctgcca
     5161 cgagccgatg aaagacggca agatcaagct gacagccgcg agcccgaaag agttgtgcct
     5221 cacatgccac accgacaagg cagagcagat cgataaagcg aaagtccagc atcccggcgc
     5281 gatgggggat tgcacggatt gtcataatcc gcatgcctcc aaaacggcgg ggttgccgaa
     5341 gccggatgca gtgaatgtct gcctgagctg tcacaccgat caggctgggc tgcgcgacaa
     5401 gaagcacctg catcagccgg cgttcgagca ggggtgtacc acatgtcacc agccgcatgg
     5461 ctccgaaaac gcacacctgc ttcgcgcggc gaacactaat gcgctgtgcc tggaatgtca
     5521 cgggcctgac gcgaacccgg gaaagctgga gaaggaacac aagattacgc tcttcgaagg
     5581 cagcgtgaaa ctgcccgaag actacttctc caaggttccg attctgccgc tgcagtacaa
     5641 cgcgggacac ccggtggacc gccatccggt gagcgatgcg atggacctga agacaaaaac
     5701 aatggtcccg atcaactgct tgacctgtca tcagccgcac gccgggaacg aaaccggaat
     5761 gctggtgaaa gaccaggcgc cgaacatggc gttctgtaag aactgtcaca aagaaggaac
     5821 gatacaagcg ctgaaaaagt agtggccatg atcaaagaga caaatatgtt gaagcagcaa
     5881 tcacactcga caggcagatc acgcagcaca tggctgtggg tggcactgct gcttgtgagt
     5941 cttgccggaa cgtcagcgtt tgccgacaaa aaaccaaagc cttctacaaa cggcaaaccg
     6001 cagccggaac gcatccgggc ctccgttaac cgtgatctcc tggtatggcc caacccaccg
     6061 gcgattgccc gcattaaatg gctggaccaa ttcactggcg agccgttcga tgcatccatc
     6121 ctcacgccca gcaagaagaa aaagcagggc tggatggacc ggctggctgg cgcgcagcct
     6181 gacggcgcag tcgacgtaaa gatcccctac cagttgatcc gcccttacgg catcacggtg
     6241 gattccaagg gcaaaatcta caccgcggac gagggagtgg atgcaatctt tatcttcgac
     6301 ccacagacca aggcggtgga actcatccgt aacggccacg aagcgcattt cggtctgatc
     6361 aacgggttgg ctatcgacga taacgaccgg ctcttcgtca ccgacggcag gctgcggcag
     6421 gtgctggtct tcaacgcgaa acaccagcag gatggcgcct tcggcgcaga tgttctggca
     6481 cggccaggcg gaatcgcact ggatcgtgaa aaccggttcc tctatgtagt ggatacggag
     6541 aacgaccagg ttgtggtgtt cgacgccgac agcttcaagg tgctgcgccg gatcggagtt
     6601 tccggcaaga agcacacgct aactgctccc ggcaccttct ctctgcccac gaatgtggct
     6661 ctcgatcgcg aaggaaatgt ttacgtaaca gacacgctga acaatcgcgt tcagattttc
     6721 gatcctgagg gcaatttcat cagcatgttt gggaaacatg gtgatgggcc gggctacttc
     6781 gcacgaccca aaggcattgc ggtggattct gacgggcaca tctgggtggt ggatacctat
     6841 caggaccgcg tgcaggtttt caaccgtgaa ggacgcctgc tgatctatgt gggcggacac
     6901 ggcggatatc cgggacagtt cgctgattcc tacggcattg caatcagcaa ggacaaccac
     6961 gtgatcgtgt cagaacaata tcccgggcgt ctgcagatgt tccagtacgt gaccgacaac
     7021 gaagccgagc aggcgaggaa gaaacagacg aacgagccgg agcaacaagg gcagaagccc
     7081 gctcccgctt cgacgaaaca gaacgacaac gcggtctcca agccgcaagg cgcgggtgcc
     7141 cagtgaacgc gccaggcaaa agttttggtc gtaatgacca agttcggccg gcagtaaccc
     7201 ccaccgccgg gttttacagg gtacctgata tcaggaggaa tgaagtgaag aaactatttg
     7261 tcattatgct cttcatcacg gtgggcgtca gcatgtccta tgcacaggac gttttgggtg
     7321 cgcacctggt gtacggacgc ggctgcgtgg catgtcacgc tccgcacagc ggcgctgccg
     7381 gaaacggtgg ctccaacgcc aacagcccct acagcggcaa caatgccctg tggggtcagg
     7441 atctttcgcc actctacggc aagactctgc agttcggtga ttcgcgcggc aactggacga
     7501 tcaccctgcc gaactacgga cctgcctctt ccggcggcag caaacccggg ccctttgatc
     7561 agtttggcgg accttttgcg gtcatcgcgt gcctgagctg ccatgacggc aacctggcga
     7621 agccggccat gatgaagggc acgaccgttg agacactgcc gaactcggca gtctccggcg
     7681 gacatgctcc gaccttcctc gggaacgacg gcacaactcc gggcaactac aacaacgatc
     7741 acccggtggg cccgaatgcc ctgttgacct gcggtggaac gttcgattgg gattgcacgg
     7801 tcaatgcgaa cggcacctat tcctacacgg gaacaggctc cgcgcagttc ctgctcgact
     7861 actttgatgt gaccaagacc ggcccggtgg cgcacctggt aagcaccagc agcacacagg
     7921 gtggctgggt tacctgcacc acctgccacg atcagcacag catgaccgtg ttcagcaccg
     7981 acggcaccgt cgcgaacaac aagccgacga tgttcttcgt gcgtggctgg tacaacccga
     8041 actccggcaa ctcggcagcg cagttctgcc gcagctgcca tggtggcgag tccaacgaaa
     8101 tgcacggcgt tacgctggcc actctgccgt aagttgcttc acttcatcgg gggagggtat
     8161 tcccctcccc cactcttaac cggaatcttg aaaagagaaa aaatcatgaa acaccagttc
     8221 atcgcttcgg ctctgctgct cttctgcggg atttcattgt cggcgcaaca taccgtgttc
     8281 cagaaagaag cgacacttca ggtcaccgga aaagccgtgg ccaaggtcaa cggcacagag
     8341 cttagcgacc gcgatctgct gcgcgagatg tatgccatct tcccgtatgc gcggcaacac
     8401 aacggcgcgt tcccccaggc gatggaggca gacatccgca agggcgctct gaagatgatc
     8461 gagttcgaag agctggtgta ccaggaagcg ctgcgcagga agatgacagt cctgccggcg
     8521 cggctgaaca aggccgaaca ggatttcagg aagcaattcc acacgccaga gcagtaccag
     8581 acatttctga aggccgagtg ccagggccag gagaaggtac tccgcgcaag gatccggcgg
     8641 tcactgctg
//
LOCUS       DASQYP010000232         4330 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_116639, whole genome shotgun sequence.
ACCESSION   DASQYP010000232 DASQYP010000000
VERSION     DASQYP010000232.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 4330)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4330)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4330
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_116639"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..867
                     /locus_tag="VE783_07570"
     CDS             <1..867
                     /locus_tag="VE783_07570"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53295.1"
                     /translation="IWEWMQQAGWLAVKTAPLGGIVLAVALSCLIGYTMGTPSPVQQA
                     ATAAAASSGANSSGQAASSETKEQPWLEGVAKPLIYPQETSEPAVLRQSPNANPGFWG
                     SLLVDLFFLVILFGILIYELSARSNQDALNSAEFDDALRIWGEYIVGICDTPREIKRT
                     LNDLRYQAMTRRSNGPTATRGEKLLKTVRQFVTGRREPEEHEAHVDEAALPPRKAALL
                     ANLTNDQMKVFLDPTLTAASDASASLKLLLELRTRHMQRFSRWIEDQKPQPAAMAASA
                     SPGDAGPKPVQA"
     gene            complement(935..1519)
                     /locus_tag="VE783_07575"
     CDS             complement(935..1519)
                     /locus_tag="VE783_07575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015347803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase domain-containing protein"
                     /protein_id="HYX53296.1"
                     /translation="MSFINFAAREINCKVVYYGAGLGGKTTNLQFIFDKAADKQKSKM
                     ISLATETDRTLFFDFLPLDLGTVRGFKTRFHLYTVPGQVFYDASRKLILRGVDGVVFV
                     ADSQEERMDANLEALDNLHENLKEHGYDFKKIPYVLQLNKRDLPNALPIEQLQRELVR
                     KAEPVFEAVAFKGVGVFETLKEVARQVLVELKKG"
     gene            complement(1750..2994)
                     /locus_tag="VE783_07580"
     CDS             complement(1750..2994)
                     /locus_tag="VE783_07580"
                     /inference="COORDINATES: protein motif:HMM:TIGR03436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VWA domain-containing protein"
                     /protein_id="HYX53297.1"
                     /translation="MPGRGPGFVKLMFLLALAGAAWAQNVPDAPQPKPDAQQQGQFPD
                     NAPPAPKNEHPAPQAEPSAAPALPNNANDAGTEGVITSRNDLPRLVVRTTFVQIPVTV
                     RDRSGRLVSGLGPNDFAVLEDGIPQQIRFMSSDPFPLSAAIVVDTDLPSTTMKKVNDS
                     LPALIGAFSEFDEVALYRYGHTVQLVSTYTGASSVSTVTISKMKRPGREGGPPMVGGG
                     PFSHTGPQINGHEADPSVKPDAVPAPVQESYVLNDAILRAAQDLSKRDRTRRRIIFVV
                     SDGREIGSTAHYDEVRKVLLSNNIAVYALGVDTAAIPIYDRLNRVRLPGFGYGNILPK
                     YVSDTAGDMLAEFDRGAIEQAYARITDVARNQYTLGYYTRQTASTACRSIEVKVHRAN
                     LNVIAKQGYCPLPPARSGAGQP"
     gene            3182..4147
                     /locus_tag="VE783_07585"
     CDS             3182..4147
                     /locus_tag="VE783_07585"
                     /inference="COORDINATES: protein motif:HMM:TIGR03436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VWA domain-containing protein"
                     /protein_id="HYX53298.1"
                     /translation="MRNAFLGLVVLACLLPARAQQQEQPPVKSDQIPTYRKTVNLVNV
                     FFNVKDKHGALVPNLKQDQFELLEDGKPQTIKYFSAESNQPLTLGILIDSSGSMQRML
                     PEEKVVAGDFLRQVINDKDLAFVISFDISVDLLQDLTSNVRLLRAGLDKARINVGGGS
                     GGIPGIGQGPIPISHPKGTLLYDGVYLASDEVLSRQVGRKAIVVLTDGVDQGSRLTLK
                     NAIESAQKADVIAYVLLISDPQYGSDSHAMGQLAEQTGGRLITVNNPDKLGKAFQQIS
                     DELRSQYSIGYTPTNEKHDGTFRKIEIKAKDYHIQARKGYYAPTE"
BASE COUNT          918 a         1216 c         1310 g          886 t
ORIGIN      
        1 atctgggagt ggatgcagca ggcgggctgg ctggcagtga aaacggctcc gcttggtgga
       61 atcgttctgg cagtcgctct ctcctgcctg attggctaca ccatgggaac gccctcgccg
      121 gttcagcagg cggcgacggc agcagccgcg tcgtccggcg caaactcctc cgggcaagcg
      181 gcgtcttcgg agacaaaaga acagccgtgg ctggagggtg tcgcgaagcc actgatttat
      241 cctcaggaga ccagcgaacc tgccgtcctg cggcagtccc ccaatgcgaa tccaggattc
      301 tggggatctt tgctggtgga tctgttcttc cttgtgattc tcttcgggat cttgatctac
      361 gaactgagcg cccgcagcaa ccaggatgcg ctgaactccg ctgagtttga cgatgcattg
      421 agaatctggg gcgagtacat tgtgggcatc tgtgatacgc cgcgggaaat caagcgcacc
      481 ctcaacgacc tgcgctacca ggccatgacg cgccgcagca atggtcccac cgctaccaga
      541 ggagagaagc tgctgaagac ggtccggcag ttcgtgaccg ggcgcagaga gccggaagag
      601 cacgaagctc acgtggacga agccgcgttg cctccaagaa aagcggcctt gctggccaat
      661 ctcaccaacg atcagatgaa ggtgtttctt gatcccacgc tcacggccgc atcggatgcc
      721 tcagcgagcc tcaagctgct gctggagctg cggactagac acatgcaacg cttcagccgc
      781 tggatcgagg atcagaaacc gcaacctgcg gcgatggcgg ccagcgcttc gccaggagac
      841 gccgggccga agccggtgca ggcgtgatgc gatgtcagtg ctacggagtc ggcatgacta
      901 ccgcgagtca atacgaacaa agtgagtttt gaaactatcc ctttttcagt tccaccagta
      961 cctggcgcgc gacttctttc agggtctcga agacgcccac gcctttgaag gcaaccgcct
     1021 caaacacggg ctcggctttg cggacgagtt cgcgctggag ctgttcgatg ggaagggcat
     1081 tgggcaggtc gcgcttgttg agctgcagga cgtagggaat cttcttgaag tcgtaaccgt
     1141 gttccttcag gttttcgtgc aggttgtcga gcgcttccag gttggcgtcc atgcgctctt
     1201 cctgtgagtc ggcgacgaag accacgccat ccaccccgcg caggatgagc ttgcggctgg
     1261 catcgtaaaa gacctggccc ggtacggtat agaggtggaa tcgggtctta aagccacgca
     1321 cggtaccaag atcgagcggg aggaaatcga agaagagagt gcggtctgtt tcggtggcca
     1381 gggagatcat cttgcttttc tgcttgtccg cggctttatc gaaaatgaac tgcaaattgg
     1441 tggttttgcc gccgagaccg gcgccgtaat acaccacttt gcagttgatt tccctggctg
     1501 cgaagttgat aaagctcaaa gacgatcctc aaagagtggg gttctgaaac gtacgtatcc
     1561 ctggctgtgc tgaaagactg tttataccat atcaggcgct taacccgggc tgacgacagg
     1621 ggttaccccc ggaagttaga gggccgttgc tacttacggt cgttctgctg agagctttcc
     1681 gaacgcggct ctgaaagggc cgatcttcca ctgattcgat ctacttttct gccgatgcga
     1741 cgcgcattcc tagggctggc ccgcgccgct gcgagccggt ggcagcggac aataaccctg
     1801 cttagcaatc acgttcaggt tggcccgatg gactttaact tcaatactgc ggcaagcggt
     1861 ggaagcggtt tgccgagtgt aatagcccag cgtgtactga ttgcgtgcaa catcagtgat
     1921 tctggcgtag gcttgctcga ttgcgccgcg gtcgaactcg gccagcatgt cgccggctgt
     1981 atcagaaacg tacttgggca ggatattgcc atagccaaag ccgggcaggc gcacgcgatt
     2041 caggcggtcg tagataggaa tggccgcggt atccacgcca agcgcgtaga cggcgatgtt
     2101 gttggagagc agtaccttgc ggacttcatc atagtgcgcg gtgctgccaa tttcgcggcc
     2161 gtcgctcacc acgaagatga tgcggcggcg agtacggtcg cgcttgctca gatcctgcgc
     2221 ggcgcggagg atcgcgtcgt tcaggacgta ggattcctgc accggcgcgg ggacggcatc
     2281 gggcttcacg ctgggatcgg cttcatggcc gttgatctgc gggccggtgt gggagaacgg
     2341 accaccgcca accatgggcg gaccgccttc ccggcctggc cgcttcattt tgctgatggt
     2401 gacggtggag acgctcgatg cgccggtata agtggacacc aactgcacgg tgtggccgta
     2461 gcgataaagc gctacctcgt caaactcact gaaggcgccg atcagcgccg gcagggaatc
     2521 attgaccttc ttcatggtcg tggaaggcag gtcagtatct acgacgatgg ccgccgaaag
     2581 gggaaaggga tcgctgctca tgaaacggat ttgctgcggg atgccatctt ccagcacagc
     2641 aaaatcgttc ggaccaaggc ctgaaaccag gcggccggat cggtcgcgga ccgtgaccgg
     2701 tatctgcaca aaggtggtgc ggaccacgag tcgagggaga tcgttacggc tggtgatgac
     2761 accttctgtg cccgcgtcgt tggcattgtt gggcaaagcg ggagcggccg agggctcggc
     2821 ctgcggcgcc ggatgctcgt ttttcggagc agggggagca ttgtcaggga actggccttg
     2881 ctgttgcgcg tcaggcttgg gctggggggc atcgggcacg ttctgtgccc atgcagcgcc
     2941 cgctaaagcc agcaggaaca tcagtttaac gaaaccagga ccacggccgg gcatccatcc
     3001 tccttgccaa actcaaggca gtacgctcaa ggaacgcgaa ctctgccgtt ctttgcaacg
     3061 ttcaagctta cgcaatgcaa tgcctgtatg aacattgtaa gctttgacag gcattcacaa
     3121 taccagcaga gtgcatctaa taagatgtat tcaaccccca atgtgatctg aagggagcgc
     3181 tatgcgaaac gcgtttctcg gccttgttgt cttggcctgc ctgctgcccg ccagggccca
     3241 gcagcaagag cagccgcccg tgaagtcaga ccagatcccc acgtatcgga agacggtcaa
     3301 tctggtcaac gtgttcttca acgtgaaaga caagcatggc gcgctcgtcc ccaatctgaa
     3361 gcaggaccag ttcgaactgc tcgaagatgg gaagccgcag accataaaat atttttccgc
     3421 ggaaagcaat cagccgctca cgctggggat cctgatcgat tccagtggca gcatgcaacg
     3481 catgcttccg gaagagaaag tcgtggccgg cgacttcctg cgccaggtta tcaacgacaa
     3541 agatttggcc ttcgtgattt cgttcgacat ttcggtcgac ttgctccagg acctcaccag
     3601 caacgtgcgc ctgctgcgcg ccggcctgga caaagcccgc atcaacgtgg gcgggggcag
     3661 cggtgggatt cccggcattg gccaggggcc tatccctatc tcgcatccta aaggcacgtt
     3721 actttacgat ggcgtctatc tcgcgtcgga cgaagtcctc agccggcaag tcggccgaaa
     3781 ggccattgtg gtccttaccg atggcgtcga ccagggtagc cgcctcacgc taaagaacgc
     3841 gatcgaatcc gcgcagaagg ctgatgtaat cgcctacgta ctgctcatca gcgatcctca
     3901 gtacggatca gactcccacg ctatggggca gctcgccgag caaaccggcg gccggctcat
     3961 cacggtcaat aatcctgaca agcttgggaa agcttttcag cagatctccg acgaactgcg
     4021 cagccaatac agcatcggct atacgccgac caacgaaaag cacgatggca cattccgcaa
     4081 gattgagatc aaagcaaagg actaccacat tcaggcgcgg aaaggctatt acgcgcccac
     4141 cgagtgagca gagaagaacc tttacgagag tcggctgatc tttacttcgc gaaatagccg
     4201 cgcttggccc gaacctgcag cttcttgttt tctgggatga tcttgatggt ccggaactgg
     4261 ccatttgccg ccagttgttc cggtttgtat gagaccgcgt actggctgcg cagctcgtcc
     4321 tgaatgtccc
//
LOCUS       DASQYP010000233         3097 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_265248, whole genome shotgun sequence.
ACCESSION   DASQYP010000233 DASQYP010000000
VERSION     DASQYP010000233.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 3097)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3097)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3097
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_265248"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..586
                     /locus_tag="VE783_07590"
     CDS             <1..586
                     /locus_tag="VE783_07590"
                     /inference="COORDINATES: protein motif:HMM:NF024948.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF4129 domain-containing protein"
                     /protein_id="HYX53299.1"
                     /translation="PQDTRWARLSLYVDALGEMWREWIINYDFSHQVRLSTQISTSAG
                     NAQSHTREWFNLKYEHAVERVLRFEELLERLTPAEMATICIVLGILLALPFLPRTWRK
                     IKQARSARNPHEAPRSAASFWYLRFLRKLSREGFKKTPGQTAVEFAESIPDPEVRQDA
                     VLFTEYYERARFNESVIDAERLPELYEEMAGRLK"
     gene            744..2312
                     /locus_tag="VE783_07595"
     CDS             744..2312
                     /locus_tag="VE783_07595"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53300.1"
                     /translation="MLRSSLLFLVSLTMVSSIAAQSIPTRLLSAPNRLELDKPTAEAK
                     AGSRLTYKVTLKDAQNQPVAATSNMQLEVETPSGQRTVTLPAGQSSVDFAWDANTSGV
                     SQIRVSSGRLHPASGLVLVPPPARFMATPAPQTLHIPPNIAEKKKSNAHKASDYDYKV
                     MHEPLPNVIVGGASHGITAAGGGGTAGPAATGPGGGAETAGAADTGGAQSAAQASKIQ
                     LYVAPLPIYGDAVKHVWQAKVSIAAMAGQSLAPAASNVPVHIQANAGSLSDSDVVIHA
                     GEFGNFDHPVLLTSNRSGTDTVRASSSLGTAEDVAVNYLQPAPQYLRLSVGTPVLSGS
                     GSSTASVQACLLDESQGITSADRDITVNLSAPGQLAAQSVTIKQDSSCSSPITWTAEA
                     GLGIIRAESAGLQPDQLQVKFPAFPWRYPMLAALGGLLGAFVIRAKRVLSAAWWSHTW
                     SSLLLGAVLGVIFYLFARFNALVLPEGWVVKLQNVPVVSSIGAFLIGFVGGVLGRSFW
                     LPKKDKAEGAAGGK"
     gene            complement(2470..3015)
                     /locus_tag="VE783_07600"
     CDS             complement(2470..3015)
                     /locus_tag="VE783_07600"
                     /inference="COORDINATES: protein motif:HMM:NF012309.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="superoxide dismutase family protein"
                     /protein_id="HYX53301.1"
                     /translation="MRFRGMICALAAIIAMSALVSFTAQAKKEKAPTAKVMMKDANGK
                     DVGTATLTPAAKGVNIKLDLHNLTPGEHAIHVHQNPACEGPDFKSAGGHLNPDNKKHG
                     LQNPDGPHAGDMPDFNVDANGKAKTTVVAPGVTMGSDPHSVFTGNGTALVIHAKADDQ
                     KSDPATAGDRVACGLIQKASK"
BASE COUNT          563 a          976 c          931 g          627 t
ORIGIN      
        1 cccgcaggat acgcgctggg cccggctttc gctttacgtg gacgcgctcg gcgagatgtg
       61 gcgcgaatgg atcatcaact acgacttcag ccatcaggtc cgactgagca cccagatcag
      121 caccagcgca gggaacgccc agagccatac ccgcgaatgg tttaacttga agtacgagca
      181 cgccgtggag cgcgtgctcc gctttgaaga gctgctggaa cgcctgaccc cggcggagat
      241 ggccaccatc tgcattgttc tgggcatcct gctggcgctg ccgttcctgc cgcgcacctg
      301 gcgcaagatc aagcaggcca ggtcagcgcg caacccgcat gaagctccgc gcagcgccgc
      361 cagcttctgg tacctgcgct tcctgcggaa gctctcccgc gaaggcttca agaagacgcc
      421 gggacagacc gcggtggagt tcgccgaatc cattccggac cctgaggtgc gccaggacgc
      481 cgtgctcttc accgaatatt acgagcgcgc ccgcttcaat gaatccgtga ttgacgcgga
      541 gcgcctgcct gaactgtatg aggagatggc ggggcggttg aagtagcctc tttttcgtcc
      601 gtagcaaatg ctcagcgcag tctgtgctca tgtgctgtat tgctggggtt ccctgcggag
      661 cagcagggaa aagccgcgct tcggcgttca atctggtgta cgatttttta acgcaaaacg
      721 ctgtgctcac cggagggttc gtcgtgctcc gctcttcatt gctcttcctg gtctccttaa
      781 ctatggtgag ctccatcgcc gcccaatcca ttcccacccg cctgctttct gctcctaacc
      841 gtctggaact ggataagcca accgcggaag caaaagccgg ctcgcggctg acctataagg
      901 tcaccctcaa ggacgcgcag aaccagcccg ttgcggccac cagcaacatg cagctcgagg
      961 tggagacgcc ctccggccaa agaacggtga cgctgcccgc cgggcagagc tcggttgact
     1021 tcgcctggga cgcaaatacg tccggcgtct cgcagatcag agtgagttcc ggcaggctgc
     1081 accctgccag cggcctggta ctagtgccgc ctccggccag gttcatggcg acgcccgccc
     1141 cccaaacgct gcacattccg ccgaacatcg ccgaaaagaa gaagagcaac gctcacaaag
     1201 cgagtgatta cgattacaag gtcatgcacg agccgctgcc caacgtgatc gtaggcggcg
     1261 catctcacgg catcacggca gcgggtgggg gcggaactgc cgggcctgcg gcaacaggtc
     1321 cgggcggagg tgcggaaaca gccggcgcgg cggacaccgg cggagctcaa tctgctgccc
     1381 aggccagcaa aatccagctc tatgttgctc ctttgcccat ctatggcgat gcggtcaagc
     1441 atgtctggca ggcaaaagtc tctatcgcgg ccatggcggg gcaaagcctt gcgcccgcgg
     1501 ccagcaacgt accggtgcat atccaggcca acgccggtag cctgtctgac tcggacgtgg
     1561 tgatccacgc cggggagttc gggaactttg atcatcccgt gctgctcacc tccaaccggt
     1621 ccggcacaga tacggtcagg gccagctcat ctctggggac agcggaagac gtggccgtga
     1681 actacctgca gccagcgccc caatatctgc ggctctccgt gggcacgccg gtgctcagcg
     1741 gttccggctc cagcacggcg agcgtgcagg cctgcctact ggatgaatcg caaggcatca
     1801 cctcggccga ccgggacata accgttaacc tcagtgctcc cggtcagctt gcggcgcaga
     1861 gcgtcaccat caaacaagac agctcatgca gcagccccat tacctggacc gctgaggccg
     1921 gccttggcat catcagggca gagtccgcgg gactgcaacc ggatcagctc caggtcaagt
     1981 tccccgcgtt cccgtggaga taccccatgc tcgcagcgct tggcggtctg ctgggcgcct
     2041 ttgtcattcg tgccaaacgg gttctctccg ccgcgtggtg gtcccacacc tggagcagcc
     2101 ttcttctggg cgccgtattg ggagtcatct tctacctctt tgcgcgcttc aatgcgctgg
     2161 tgcttccgga aggctgggtg gtcaaactgc aaaacgtccc cgtagtgagc tccattggcg
     2221 cattccttat cggatttgtg ggtggcgttt tgggacgtag cttctggctg cccaaaaaag
     2281 acaaagcaga gggcgcagcc ggcggaaaat aacctgttcc gttccttcac tgtcgccgcg
     2341 ctcctccgtg tgtcggtggg cggtgtcagt ctttgctttc aaacctcggc agggcccacc
     2401 actttggcag cctgagcccc accaaccgag taccaactac taaccttctt cgctcgcgat
     2461 tattgattgc tatttgcttg ctttctgaat cagcccacag gccacgcgat cgcccgccgt
     2521 cgccgggtcg ctcttctggt cgtcggcctt ggcgtggatc accagggcgg tgccgttgcc
     2581 ggtgaagaca gagtgcgggt cgctgcccat ggtcacgccc ggcgccacca cggtggtctt
     2641 agccttgccg tttgcatcca cgttgaagtc cggcatgtcg cccgcatgcg gcccgtcagg
     2701 gttctgcagg ccatgcttct tgttgtcggg attcaggtgc ccgccggctg acttgaagtc
     2761 cgggccctcg caagcgggat tctggtgaac gtgaatggcg tgctcgcccg gcgtgaggtt
     2821 gtgaagatcg agcttgatgt ttacgccttt ggcagccgga gtgagcgtgg ccgtgcctac
     2881 gtccttgccg ttggcatctt tcatcatgac cttggcggtg ggcgctttct cttttttggc
     2941 ctgggccgta aagctcacca gcgccgacat ggcgataatc gcagccagcg cgcaaatcat
     3001 tcctctgaat cgcatagatc gcctccttgt gatgaagatg aggaggattg tagctgaaag
     3061 gcgacgagtt tttcgcggag ccggacttgg ggatctc
//
LOCUS       DASQYP010000234         2834 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_242917, whole genome shotgun sequence.
ACCESSION   DASQYP010000234 DASQYP010000000
VERSION     DASQYP010000234.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 2834)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2834)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2834
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_242917"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            349..528
                     /locus_tag="VE783_07605"
     CDS             349..528
                     /locus_tag="VE783_07605"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53302.1"
                     /translation="MPKDFVCAVCEQVEKRCSCVKYCILCRGYYDVRLCEDGQYYCRP
                     CRESCDLEAQYQPSA"
     gene            642..1448
                     /locus_tag="VE783_07610"
     CDS             642..1448
                     /locus_tag="VE783_07610"
                     /inference="COORDINATES: protein motif:HMM:NF012933.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53303.1"
                     /translation="MSGLGSPDHPITGSPDLDTAQSLVAYYLALLRRWGSQHWWPAQS
                     RFEVIVGAYLTQNTNWTNVEKAIASLRSAHALSLDALRKLPLPKLEALIRSSGYYRQK
                     ALKLKTFIRYLDKNYSGSLDRMFTQPTEKLRSELLALHGVGPETADSILLYSGGHPVF
                     VVDAYTRRILERHAIISPKTPYEEIRRVIEEAVQSTEPESLLKAERGDDPRHPQSRMS
                     RAGRSELAQHYNELHALIVRAGNQYCRSTPKCEGCPLRDYLPAQPQATAL"
     gene            1498..1650
                     /locus_tag="VE783_07615"
     CDS             1498..1650
                     /locus_tag="VE783_07615"
                     /inference="COORDINATES: protein motif:HMM:NF039824.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lmo0937 family membrane protein"
                     /protein_id="HYX53304.1"
                     /translation="MLLIIALVLFVLWILGFVAFHVSSALIHLLLILAVISLVWHLVT
                     GRRAAV"
     gene            complement(1740..2357)
                     /locus_tag="VE783_07620"
     CDS             complement(1740..2357)
                     /locus_tag="VE783_07620"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HYX53305.1"
                     /translation="MANYCKENPKRLLSCGSVHPRHSLNVQKDIDEIVRLGIRLIKIH
                     PPHQLLYANDYLNGVKELETIYRAAEANEIPVMVHTGTSIFPAARNKYGDPIYLDDVA
                     VDFPKLRILMAHGGRPIWMQTAFFLLRRHRNIHLDISGIPPKILLTYFPRLEEIAKKT
                     LFGTDWPSPGIPDIKQNLNQFQALSLPEEVKEQVLSKTALSIWPA"
     gene            complement(2361..2585)
                     /locus_tag="VE783_07625"
     CDS             complement(2361..2585)
                     /locus_tag="VE783_07625"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53306.1"
                     /translation="MTITDCHIHIQPAEMFKTAALEVMKKARGHYDDILEYCRSPKSL
                     LKYLDSIGVERAVLINYVAPETMGFTHEVN"
     gene            complement(2655..>2834)
                     /locus_tag="VE783_07630"
     CDS             complement(2655..>2834)
                     /locus_tag="VE783_07630"
                     /inference="COORDINATES: protein motif:HMM:NF015415.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53307.1"
                     /translation="GVEHALAGKKVDELLATVAGELAGKTAKPLTTSGLTPEYRREMV
                     KVYAKRAVMAAVSGT"
BASE COUNT          567 a          880 c          757 g          630 t
ORIGIN      
        1 gtccgccgct ggaggggtat tccaccggca tgtcccagcc gccaaaatcc accattttgg
       61 ctccgagccg ccggtgcagg ccgttaagcg cggttttccg aagtgtctgc gtatctgtac
      121 tggatgacaa tgctttttct cgctcagggg gacagaatgg ttcgccgggt cagggggaac
      181 cttaaaggtt atcacccgcg tttttagggg tcaatgaagc gggcagcaag ccgttcagtt
      241 ttggcctctg tgccggcgtt gacgccactc tcgggggctt cggcgggcag ctccaggctt
      301 aaccttggta actttggccc acactggaaa ttgcggtaag cttcgcccat gcccaaagat
      361 ttcgtttgcg ctgtctgcga gcaggtggag aagcgctgct cctgcgtcaa gtactgcatt
      421 ctctgccggg gctattacga cgtccggctc tgtgaagatg gccagtacta ttgccgtccc
      481 tgccgcgaat cctgcgacct cgaagcccag taccagccca gcgcctaacc aatcgggtga
      541 tctgccgatc gggtgatcgg cggaagcaga ctgaacatcc tgcgataatc ttcaatgtgg
      601 tgattgagca gcgtcaatgc tctcacaaca gcgaatctct catgagtggc ctcggatcac
      661 ccgatcaccc gatcaccgga tcacctgatc tggatacagc tcagtcctta gtcgcctact
      721 acctcgctct gctccgccgc tggggctcgc agcactggtg gccggcgcag tcacgcttcg
      781 aagtgatcgt cggcgcatac ctcacccaga acaccaactg gaccaacgtc gaaaaggcca
      841 tcgccagcct gcgcagcgcc catgcgctca gccttgacgc tcttcgcaag ctgccgcttc
      901 cgaaacttga agctctaatc cgctcctccg gctactaccg ccagaaggct ctcaagctca
      961 agactttcat ccgctatctc gacaagaact actccggctc gctcgaccgt atgttcaccc
     1021 agccgacgga gaagctgcgg tcagagctgc tcgcactcca cggcgtcggc ccggaaaccg
     1081 ccgattccat cctgctctac tccggcggtc atcccgtgtt cgtggtggac gcctacaccc
     1141 gccgcattct ggagcgccac gcgatcatct ccccgaaaac accctatgaa gagattcgcc
     1201 gcgtgatcga agaagctgtt cagagtaccg agcccgagtc tctgctcaaa gctgaacggg
     1261 gcgacgaccc gcgtcatccg cagtcgcgca tgagccgggc cgggcgcagc gagctcgcgc
     1321 agcattacaa cgaactgcat gcgttgatcg ttcgcgccgg aaaccagtac tgccggagca
     1381 ctccgaagtg tgaaggttgt ccgctgcgcg attatttacc tgcccaacca caagcaacag
     1441 ccctctaagc gggagaatcg aattcgatca agactaacct acggggggat ttgacccatg
     1501 ctcttgatca tcgcgcttgt gctgtttgtg ttatggattc ttggcttcgt agccttccac
     1561 gtgagcagcg ccctgattca ccttctgctc atcctggcag tgatatcgct ggtatggcac
     1621 cttgtgaccg gcagacgagc cgccgtctga cgcgcagcgt ctgctgcaaa gaacgtcgtt
     1681 gaccggaagt tcgcggagag acgtggcatt ccacgtctct tttcttttcg tgcctgaagc
     1741 taagccggcc agatgctgag cgcggtcttg ctgagcacct gctctttcac ctcttccggc
     1801 aggctgagcg cctgaaactg gttcaggttc tgcttgatgt ccggaattcc ggggctcggc
     1861 caatctgtgc cgaatagtgt cttctttgcg atctcttcca gccgggggaa atacgtgagc
     1921 aggattttcg gcgggatacc gctaatatcc aggtgaatgt tccggtgccg ccgtagcagg
     1981 aagaacgccg tctgcatcca gatcggccgc ccgccatggg ccatcaggat cctgagcttc
     2041 ggaaaatcca cggcaacatc gtccaggtaa atgggatcgc cgtacttatt ccgggctgcg
     2101 ggaaagatcg atgtgcccgt gtggaccatc acagggattt cattcgcctc agctgcgcga
     2161 tagatcgtct ccagctcttt tacgccgttc agatagtcgt tggcatacag caactggtgc
     2221 ggcggatgga tcttgatcag ccgaatcccc agccgcacga tctcatcaat atctttctgc
     2281 acgttcaggc tgtgccgcgg atgcacgctg ccgcacgaaa gcagccgctt cgggttttcc
     2341 ttgcagtaat tcgccaccca ctagttaacc tcgtgggtaa aacccatcgt ctccggcgca
     2401 acataattaa tgagcaccgc ccgttccacg ccgatggaat ccagatactt gagcagtgac
     2461 ttcggcgagc gacagtactc caggatgtcg tcatagtggc cgcgcgcttt cttcatcact
     2521 tcaagcgccg ctgtcttgaa catctcagcc ggctggatat ggatgtgaca atctgtaatc
     2581 gtcaatgctt gaccttcggg gtactccgca gtttgtaatg caataacgac gaagtcctca
     2641 ccaaatacca gatactaagt accggaaact gccgccatca cggcccgctt ggcatacacc
     2701 ttcaccatct cgcgacggta ctccggcgtc agccctgacg tggtcagcgg tttagcggtc
     2761 ttgcccgcca actctccagc aaccgtcgcc agcaactcgt caactttttt gcccgcgaga
     2821 gcgtgctcaa ctcc
//
LOCUS       DASQYP010000235         8153 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_184658, whole genome shotgun sequence.
ACCESSION   DASQYP010000235 DASQYP010000000
VERSION     DASQYP010000235.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 8153)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8153)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8153
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_184658"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(168..1352)
                     /locus_tag="VE783_07635"
     CDS             complement(168..1352)
                     /locus_tag="VE783_07635"
                     /inference="COORDINATES: protein motif:HMM:NF044955.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53308.1"
                     /translation="MPCSGWSTSADFAMPMLLTLSFDLRFLIFPALLLICLFLCWLKA
                     GKDPKLAGVMPEYAPPAGISPATARYILTGGSDGTSLAAVLVQLSARRVVSIEPRDGI
                     FHLELLHKDAAMEPEEAAAITALFQFGPVAKPTPGAAPSQGALAEEIRQAVQKIPSQE
                     LASQGLAVAAELSSEARPTADINPRIQNQVEPAVEAIQKALQAKYRGVFFTWNFRYVG
                     VAMLATFLYGIFTAAFLGAGNALFLTFWFLFFTGGAGTVIVMSQAAKPARPSMSQRMK
                     EIVFPLAFFVFPATTIGAFALPQYFLFIVGLVLCSIINSVFLVLMRAPTKAGQEVLQH
                     LAGFREFLVRVEQDRMERLNTPEEKTRVMSEFMAYAVALGVREGWGDRMASAFSDAAV
                     QR"
     gene            complement(1431..1793)
                     /gene="trxA"
                     /locus_tag="VE783_07640"
     CDS             complement(1431..1793)
                     /gene="trxA"
                     /locus_tag="VE783_07640"
                     /inference="COORDINATES: protein motif:HMM:NF012314.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0015036 - disulfide oxidoreductase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin"
                     /protein_id="HYX53309.1"
                     /translation="MASERILELTDGNFDQEVLKSEQPVMVDFWAAWCGPCKALSPIV
                     DEVAAAYSGKVRVGKMDVDRSPVTPQRYGVRGIPTLLIFKNGQVQEQIVGYVPRDTIE
                     KALNKHVTTGQTTPVSKS"
     gene            2246..3979
                     /locus_tag="VE783_07645"
     CDS             2246..3979
                     /locus_tag="VE783_07645"
                     /inference="COORDINATES: protein motif:HMM:TIGR03436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VWA domain-containing protein"
                     /protein_id="HYX53310.1"
                     /translation="MKESSGLFTLVAVTISLLATVKLSGQSSPADSTPTFRTTTRLVS
                     VDVVATDSKGHPVTDLKQPDFTVKEEGNQEELRVFSFQQPAASSTVKASAQPEPPANV
                     FGNLRRTRITGPLNVLLLDGINTRMNNQDFVKSQVLEFLKKVPADQPLAIYLLGQKLQ
                     LLQDFTSDPEVLKKVIEQFKAPHSPLMDNAAGGIQRFWLEGVPLPPNLKRQVLEFQQQ
                     TESAQMDQRVSLTVAAFRTLAHTLAGYPGRKNLIWVSEAFPITLIPTKIMFGESGARA
                     TRFYNNPAVEIANLLADAHIAVYPVDARALVHTYAYDPSVRFDPRGNGVSPGQAASDL
                     QDELQPVHAAMEQMAEDTGGRASYNRNDIDDAIRQDMNDGSTYYTLGYYPQKKNWDGK
                     FRKISVQVNRRGVKLRYRLGYFAMDPAKGSLPDKQREMEFSDNLSPDQPAATQMIFEA
                     AISPPSEKTSNKVAVFFAVDPQTVTFIQEDNGNQKARLQCAARIFTSAQDNHPLKTEA
                     EDVDADLSPENMARVARSGVPCRASFDLPPGEYFIRLGIRDLQSGRIGTANAYLKVPA
                     LKQQERERTQH"
     gene            4492..6966
                     /locus_tag="VE783_07650"
     CDS             4492..6966
                     /locus_tag="VE783_07650"
                     /EC_number="1.2.4.2"
                     /inference="COORDINATES: protein motif:HMM:NF006914.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004591 - oxoglutarate dehydrogenase
                     (succinyl-transferring) activity [Evidence IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoglutarate dehydrogenase E1 component"
                     /protein_id="HYX53311.1"
                     /translation="MSTSVELTTTEQQSIEREHLSDAFRRWGYLNASLNPFGGPVGGG
                     YPDLPTQGPGIDELKRAYCGTIGAEFMHIPQRDRREWLQSQMEKSEKQQVDRRWLAER
                     LMQADLFEQILQTRYLGTKRYSGEGATALIPLLDTVLETGAENGANTAVMAMSHRGRL
                     TVMNLIVGIPAENVFAGFEDVDPRSVLGGGDVKYHQGATGEYATRNGRHIRMHLVSNP
                     SHLEAVDPVALGRTRAKQTHAGVDGQKQVLPIIMHGDAAFAGQGIWAETLNFAGVKGF
                     TVGGCIHIIVNNLIGFTTNPAELHTSRFSSDLAKRQPIPIFHVNAEDPEAVLRVARTA
                     VEYRYRFDSDVVIDLIGYRRHGHSEVDDPTITQPLLYKKINAHPPLFELYAREHNIDL
                     SSVTASFKQEIDAAYDRAASMEKAPVLRKLPEYWGRFVGGRYSPKYEVATAVPEDRLK
                     QIAHGLVSYPEGFHVHPKIKKLLEQREKMGTGKMPLDYGMAEALAFGSLVTQGIPVRI
                     TGQDVRRGTFNQRHSFLLDTETEQDYVPLSHLAPDQAWFEAYNSILSEAAVLGFEYGF
                     SRDYPDALVLWEAQFGDFANGAQIIIDQFLVAGEDKWGLLSGLVMLLPHGYEGQGPEH
                     SSGRIERYLQLAAKDNIQVCQPSTAAQYFHMLRRQALRNWRKPLIVFTPKGMLRHPDA
                     ASPLSEVANGHFQTVIQDREISAAERVIICTGKIGHELRRERKRRGDTRTAIITLEQL
                     YPLPEAELEAALSQHGDAREFLWVQEEPANMGALGFLAPQLERLTGGQPLRSVKRSAS
                     SSPSTGSHTAHEMEQKTLLELAFASF"
     gene            7061..7699
                     /locus_tag="VE783_07655"
     CDS             7061..7699
                     /locus_tag="VE783_07655"
                     /EC_number="1.15.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013352894.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004784 - superoxide dismutase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="superoxide dismutase"
                     /protein_id="HYX53312.1"
                     /translation="MAQGTVTAHEVPALPYAYNALEPHIDEQTMHLHHDKHHAAYVAK
                     LNAAIEKHPELGSKTPEELLRNLNAVPEDVRGMVRNNGGGHVNHTMFWQIMGPKGGSP
                     TGAIADAINKTFGSFDAFKEKFEAAGANQFGSGWAWLVKTRSGEFKVTSTPNQDNPMS
                     NGEFPIMGNDVWEHAYYLKYQNRRPEYLKAWWNVVNWEEVNKRLAQADSFFK"
     gene            complement(7774..>8153)
                     /locus_tag="VE783_07660"
     CDS             complement(7774..>8153)
                     /locus_tag="VE783_07660"
                     /inference="COORDINATES: protein motif:HMM:NF015148.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0035673 - oligopeptide transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="OPT/YSL family transporter"
                     /protein_id="HYX53313.1"
                     /translation="GIRSLSFAVGFYLSIATTLAIFAGGVVRWLVEARGRRAGEKVEE
                     SEVSPGSLYSSGLIAAGGIVGLVGMFIKVMEAWKWLPPNSIAWGQKIPALANSNILAV
                     IMFGLLAYSLYHFAHKPLEGDKR"
BASE COUNT         1823 a         2429 c         2239 g         1662 t
ORIGIN      
        1 gtgcagggac gcgtcatcgg tgttctgcgc aagtactaga aattgggtga ttgagtaatt
       61 tgtgatttgg taattcgcca cgggtctgat cggcggtaca cgccccgctg atcaggcccg
      121 cttgatcaaa ttaccaactt accactttac gaaattaccc aatctgctta ccgttgcacg
      181 gcggcatcgg agaacgcaga ggccattctg tctccccagc cttcacgcac gcccagcgcc
      241 actgcgtaag ccatgaactc gctcatcacg cgagtttttt cttctggtgt gttgagccgc
      301 tccatgcggt cctgctccac ccgcaccagg aactcgcgga agcctgccag gtgctgaagc
      361 acctcctgcc cggccttggt aggcgcgcgc atcagcacca ggaacacgct gttgatgata
      421 gagcacagca ccagccccac aatgaacagg aaatactgcg gcagtgcgaa ggcgccgatg
      481 gttgtcgcgg gaaaaacgaa gaacgcaagt ggaaaaacga tctctttcat ccgctggctc
      541 atggatggtc tcgccggttt tgcggcctgt gacatcacaa ttactgtccc tgcgccgccg
      601 gtgaaaaaca agaaccagaa ggtcagaaac agagcattgc ctgcgcccag gaatgcagcc
      661 gtgaagatcc cgtacaagaa agtggccagc atcgccactc ccacgtagcg gaaattccac
      721 gtgaaaaaga cacctcgata tttggcctgc aatgccttct gaatggcctc caccgctggc
      781 tcaacttgat tttgaattcg gggattgatg tccgcggtgg gccgagcctc tgacgagagt
      841 tcggctgcca ccgccagccc ttgcgaagca agctcttgcg acggaatctt ctgaacagcc
      901 tgcctgattt cttccgccaa cgcgccctgg ctgggagctg cacctggagt tggttttgcc
      961 acgggaccaa actggaagag cgcggtgatc gccgccgcct cttccggctc catggctgcg
     1021 tctttgtgca gcagctcaag atgaaatatg ccgtcgcgcg gttcaatgct cacgacgcgt
     1081 cgcgctgaga gctggaccag caccgcggca agagaagtgc cgtcgcttcc tcccgtcaga
     1141 atatatcgcg ccgtcgcggg tgagattccg gcaggaggag cgtactcagg cattacgccc
     1201 gcgagctttg ggtctttgcc tgccttcagc cagcagagga acaggcaaat caggaggagc
     1261 gccggaaaga tcaggaatcg gaggtcaaag gaaagagtaa gcagcatcgg catagcaaag
     1321 tcggccgagg tcgaccagcc ggagcaaggc attttacccg ccagggccaa ttttggctcc
     1381 aataaaaaac cccggcacgg agccggggtt tctcgcaact ctgaagttta ttagctcttg
     1441 ctgaccggtg ttgtctggcc ggtggtaacg tgcttattca gcgccttttc gattgtgtca
     1501 cggggcacgt aacccacaat ctgctcctgc acctgtccgt ttttgaaaat caggagcgtc
     1561 gggatgccgc gtacgccgta acgttgcggg gtgaccgggc tgcggtccac atccattttg
     1621 ccgaccctca ccttgccgga gtaggctgcc gccacctcgt ccacaatggg agagagcgct
     1681 ttacaggggc cgcaccaggc cgcccagaaa tccaccatca ccggctgctc actcttgagc
     1741 acttcctgat cgaagttgcc gtccgtcagt tccagaatcc gttcgctcgc catccgaatg
     1801 cctgccttct tgggaaattg tttagctggt acgcctgagt ggttcgccca accttttatc
     1861 ctagcaaatg attagatgag tttgcgtagg gcaagtttca actcggctaa atcattgaat
     1921 ccatgctgct tgcagggcgg gaatttggcc tctgcttgcc ggggcgcaag ctcaatgcgg
     1981 cctcgcggta acgttaccaa agtgacgtgg acgcgaggcc agtgtggttc tagactttcc
     2041 ctcggtggta aggcagttct gggggagggc tgcctggcgt cctgcgattc acttcgcagg
     2101 acgcttgctt tttgggcggc atttttcacc tcgcctttgc gccgccctgg gctcattttg
     2161 gctgcttttc gtcgcatggt agacaagctg ccgccgacca cgtctaatgc ctacagcaac
     2221 actctgcaaa cccttggaga ggttgatgaa agagtcctct gggttgttca cgttggttgc
     2281 cgttactatt tctttgcttg cgacggtaaa gctttcaggc cagtcttcgc ccgccgattc
     2341 cacaccgacc tttcgcacca ccacgcgcct ggtctccgtc gacgtcgtgg ctacagactc
     2401 caaaggccat cccgtcacgg accttaagca gccggatttc accgtgaagg aagaagggaa
     2461 ccaggaagag ctgcgcgtct tttccttcca gcagcccgca gccagttcca ccgtcaaagc
     2521 ttcagcccag cccgaaccac cggctaacgt gtttggcaat ctccgccgca cgcgaatcac
     2581 aggtccgctc aatgtgctgc tgctggatgg catcaacacg cgcatgaaca accaggattt
     2641 tgtgaagagc caggtgctcg aattcctgaa aaaggttccg gcagaccagc cgctcgccat
     2701 ctacctgctc gggcaaaaac tgcaactcct acaggatttc acctccgatc ctgaagtgct
     2761 aaaaaaagtc attgaacagt tcaaagctcc gcattctccg ctcatggata acgccgccgg
     2821 aggcatccag cgcttctggc ttgagggcgt gccgttgccg cccaatctca agcgacaggt
     2881 gctcgagttc cagcagcaga cagaatcggc tcagatggac cagcgcgttt ccctcaccgt
     2941 ggcggctttc cgaaccctcg cgcacactct ggccggctat ccgggaagga aaaacctgat
     3001 ctgggtttcg gaagcttttc ccatcacgct gattcccacc aaaatcatgt tcggtgaaag
     3061 cggcgcccgg gccacccgct tctataacaa tcccgcggtt gaaattgcca atcttctggc
     3121 tgatgcgcac atcgccgttt acccggttga cgcacgcgca ctcgtgcata cctacgctta
     3181 tgatccttct gtgcgttttg atccacgggg caatggcgta tcgcctggcc aggctgcgtc
     3241 ggatcttcaa gacgaactgc aacctgtgca cgccgccatg gaacagatgg cggaagatac
     3301 cggaggtcgc gctagctata accgcaatga cattgacgat gctattcgcc aggacatgaa
     3361 tgatggttcc acatactaca cgctcggcta ctatccgcag aagaagaatt gggacggcaa
     3421 gttccgcaag atcagcgtgc aggtgaatcg ccgtggcgta aaactgcgtt atcggctggg
     3481 atatttcgcc atggatcccg caaaaggcag tttgcctgac aaacaacgtg agatggaatt
     3541 tagtgacaac ctgagccctg accagcccgc agcgacgcag atgatttttg aagccgccat
     3601 ttcgccgccc agtgaaaaga cgagtaacaa agtagcggtc ttcttcgccg ttgacccgca
     3661 gaccgtaacg tttatccagg aggacaatgg aaatcaaaaa gcgcggctgc aatgcgcggc
     3721 gcgcatcttt acctcagcgc aagacaatca tccgctcaaa acggaagctg aagacgtgga
     3781 tgccgacctg tcacccgaaa acatggccag agtcgcccgc agcggagtac cttgccgcgc
     3841 atcgtttgat cttccgcccg gtgaatactt catccggctc ggcatacgcg acctgcagag
     3901 cggccgcatc ggcacagcga acgcgtacct gaaagtccca gcgctgaagc agcaggaacg
     3961 tgagcgtact caacattgaa gtctggccga cttaacgcac caaagcagtc tcctgccgga
     4021 acagtctctg gcgaatcttc gcaaccagag tcggcggaag aggagcatag ttaagctgtc
     4081 gcgtgtccta ttgtccagcg gccccaactc aggaattcac gcaattcctg ttgccctaat
     4141 aactgttctg tggtgccatc ggtgatttat ctcgatactg tccagcagca ttccgccaca
     4201 gccggcacgt ggaccaggtt tctgccttca cgcctcatct catcattact cagcggtgcg
     4261 tcgattgcgc gccgaaatta acagctccca cctgcatctg ccgaaaccct gcgccgctgc
     4321 cgacggactt cctgtgtacc tcaatctgaa agaaaaacag gtaaagaagg ttccagactt
     4381 gaaggatttg gaaatttgct ccttgcgtct tttcctctac cgcaaggccg ccccaacagg
     4441 tgttatcctc ataaatagga tcattaagtc atgattccgg actaagaaat cgtgagtaca
     4501 agcgtagaac ttaccacaac agagcagcaa tccattgagc gcgagcatct ttccgacgcc
     4561 ttccgccggt ggggatacct caatgccagt ctcaatccct tcggaggccc ggttggcggt
     4621 ggctatcctg accttcccac gcaaggcccc ggcattgacg agttgaagag agcctattgc
     4681 ggcaccatcg gtgcagagtt catgcacatc ccgcagcgtg accgtcgcga gtggttgcag
     4741 agccaaatgg aaaagtccga gaagcaacag gtggaccgcc gctggctcgc cgagcggctg
     4801 atgcaggccg atctcttcga acaaatcctc caaacacgct atctgggaac caagcgctac
     4861 tcaggcgagg gcgcaaccgc gcttatcccg ctgctcgata ccgttcttga aaccggtgct
     4921 gagaatggcg ccaataccgc ggtcatggcc atgagccatc gcggccgcct caccgtaatg
     4981 aacctcatcg tcggcatccc ggcagaaaac gtatttgccg gattcgaaga tgtggacccg
     5041 cgcagcgtgc tgggcggcgg cgacgtcaag tatcatcagg gcgcaaccgg cgagtacgct
     5101 acgcgcaacg gcaggcacat ccgcatgcac ctggtttcga atcccagcca tcttgaggct
     5161 gtcgatcccg ttgcgctggg ccgcacccgc gccaaacaga cgcacgccgg ggtggacggc
     5221 caaaagcagg tcttgcccat catcatgcac ggcgacgcag cttttgccgg ccagggaatc
     5281 tgggcggaaa cgctgaactt tgccggcgtg aaaggcttca ccgtcggtgg ttgcattcac
     5341 atcatcgtga acaacctgat tggctttact accaatcccg ccgagctgca tacatcgcgc
     5401 ttttcgtctg acctggccaa gcgccagccc atccccattt tccacgtgaa tgcggaagat
     5461 ccggaagcgg tcctgcgtgt tgcacggacg gcggtggaat atcgttaccg ctttgatagc
     5521 gatgtggtaa ttgacttaat cggctatcgt cgccacggcc acagcgaagt ggacgatccc
     5581 accattacgc agccgctgct ctataagaaa atcaacgctc atcccccgct gtttgagctt
     5641 tatgcgcgcg agcacaacat cgatctcagc tccgtcacgg cgtctttcaa gcaggagatt
     5701 gacgccgcct acgaccgcgc cgcgagcatg gagaaagctc ctgtgctgcg caagctccct
     5761 gaatactggg gcaggttcgt gggcgggcgt tacagtccga agtatgaagt cgccaccgcc
     5821 gtgccggaag accgcctgaa gcagattgca catggactcg tttcttaccc ggaaggtttc
     5881 cacgtccatc ccaagatcaa aaagttgctg gagcagcgcg agaagatggg gaccggcaag
     5941 atgccgctcg attatggcat ggccgaagct ctcgcgttcg gatcgctcgt gacgcagggg
     6001 attccagttc gcatcaccgg gcaggatgtc cgtcggggta ccttcaacca gcgccactcc
     6061 tttctcctgg acactgagac cgagcaggac tacgtgccgc tcagccatct tgcgcctgat
     6121 caggcgtggt ttgaagctta caactcgatt ctctcggaag ccgcggtgct cggctttgag
     6181 tacggcttca gccgcgacta tcctgacgca ctcgttctct gggaagcgca gttcggagac
     6241 tttgccaacg gcgctcagat catcattgac cagtttctgg tcgctggtga agacaaatgg
     6301 ggactgctct ccggcctcgt gatgctcctg ccgcacggct atgaagggca gggaccggaa
     6361 cattccagcg gccgcatcga gcgctacctg cagctggctg ccaaggacaa cattcaagtc
     6421 tgccagccct caacggctgc gcagtatttc catatgctgc gccggcaggc gctgcgcaac
     6481 tggcgcaagc cgctgattgt atttacaccc aaaggcatgc tgcgacatcc tgatgccgcc
     6541 agtccgctga gtgaggttgc aaacggccat ttccaaacgg tgattcagga tcgcgaaatc
     6601 tctgcggcgg agcgcgtgat catttgcacc ggcaagatcg ggcatgagct gcgacgcgaa
     6661 cgcaaacgcc gcggagacac tcgcacggct atcatcacgc tggaacagct ttatccgttg
     6721 ccggaagcag agcttgaggc tgccttgtca cagcacggcg atgcccgcga gttcctgtgg
     6781 gtgcaggaag agccggctaa catgggcgct cttggattcc tggcgccaca actggaacgc
     6841 ctcaccggcg gtcagccact gcgctcggta aaacgttcag cgtcgtccag tccgtcaacc
     6901 ggttcgcata ccgctcatga gatggagcag aagacattgc tcgaactggc atttgcgtcg
     6961 ttttaaaacg cggcgatttc atgcgggaaa gccgcatgca tcgccaccgg tagtcaggtc
     7021 atcaaaaatc gagttcaaaa gataaggaaa ggtggttgaa atggcacaag gaactgtaac
     7081 ggcccatgaa gttccggcgc ttccttacgc gtacaacgcg ctggagcccc acattgatga
     7141 gcagaccatg cacctgcacc atgacaagca tcatgcagcg tacgtggcca agctgaatgc
     7201 cgcgatcgaa aaacatcctg aactgggcag caagactccg gaagaactgc tgcgcaacct
     7261 gaacgccgtg ccggaagacg tccgcggtat ggtccgcaac aacggcggtg gccacgtgaa
     7321 ccacaccatg ttctggcaga tcatggggcc gaaaggcggc agccctaccg gcgcaattgc
     7381 cgacgcaatc aacaagacct tcggcagctt tgacgccttc aaggaaaaat tcgaagccgc
     7441 aggggccaac cagtttggca gcgggtgggc atggctggtc aagacgaggt ccggcgagtt
     7501 caaagttaca tccacgccga accaggacaa tcctatgagc aatggcgaat tcccgatcat
     7561 gggcaatgac gtgtgggagc acgcctatta cctcaagtac cagaaccgcc gtccggaata
     7621 cctgaaagcc tggtggaatg ttgtcaattg ggaagaagta aacaagcgcc tggcccaggc
     7681 cgactccttc ttcaaataac ctgatcgcca gccgatcata aaagccgcct ctgagcccag
     7741 ccagtcggct gggcttcgga tagaggtttc agcttaccgc ttgtcgcctt ccagcggctt
     7801 gtgggcgaaa tgataaagcg agtacgccag caggccgaac atgattaccg ccagaatgtt
     7861 gctgttggcc agcgcgggaa ttttctgtcc ccaggcaatg gagttgggtg gcagccattt
     7921 ccaggcttcc atcactttga tgaacattcc gacaaggccc acgattccgc ctgccgcaat
     7981 caacccgctg gaataaagcg atccggggct gacctcgctc tcctccacct tctctccggc
     8041 gcgcctgccg cgcgcttcaa ccagccagcg gaccacgcct ccggcaaaga tcgccagggt
     8101 ggtagcgatg gaaagataaa agccgactgc aaacgagagt gagcgaatgc cga
//
LOCUS       DASQYP010000236        17677 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_227844, whole genome shotgun sequence.
ACCESSION   DASQYP010000236 DASQYP010000000
VERSION     DASQYP010000236.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 17677)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17677)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17677
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_227844"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1625)
                     /locus_tag="VE783_07665"
     CDS             complement(<1..1625)
                     /locus_tag="VE783_07665"
                     /inference="COORDINATES: protein motif:HMM:NF013957.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004866 - endopeptidase inhibitor activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MG2 domain-containing protein"
                     /protein_id="HYX53314.1"
                     /translation="MEHSQRGAVMRDRGAIWKLFVCAVFGVISSGAANAAPYFSLSTD
                     KTFAPHEKVTIHMYTRDVHALEFRMYRVNDPVLFFEKLRDIHGFGAGRYEEKEQIDQK
                     TWIERFHDWKRRKFVRIRNFFRDQFSDRSRAEIREQEGNKNKKAGPSAVFAQVPVLNQ
                     QQLVARWRQEVPSHYLSERQDVPVESLEEGAYVVEATDGQLRAYTVVIVSRLALVMRS
                     APGQVLFYSVERTSGAPVPGTQVEVWWDHKKQAAVNTDAQGLATLAVKAENEQDIRVF
                     ATHEKQVALVAGEYFNWSSNPGADWTGYVYSDRPVYRPGHTVHFKAIVRKHNGERYSV
                     PAGMALNVSVQDSAGKEVYTSKATVSAFGSVHGDFNLAQDAALGYYSIVFRSDSPTES
                     YPMSGGFNVEEYKKPEYEVRVTPDKPRILEGETARATIEARYFFGEPVAGAEVKYVVH
                     RSVYWSPVFGDEDFYDDSFGDFEGFEGEGGGDYGRSSDAPEYDYGGQQLSEQTGRLDA
                     NGRLKITFPTTLDSRKSDYRYRVEARVTDESRR"
     gene            complement(1598..2299)
                     /locus_tag="VE783_07670"
     CDS             complement(1598..2299)
                     /locus_tag="VE783_07670"
                     /inference="COORDINATES: protein motif:HMM:NF018387.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1175 family protein"
                     /protein_id="HYX53315.1"
                     /translation="MTSFAGTGTPAAISPSPYLHLDSPADRDAFRSWFTAIAEYQSLR
                     DANDLPAEINDCAALLRYSYRGALHAHTAEWLVQNKLEALGSLPSVGKYAYPRTPLGA
                     GIFRITPPESGREDKADYAEFADAKTLWRFNTFLVSRDVRVARPGDLLFYRQLEQNSY
                     HSMIYLGRSRLAHAGAEGAIVVYHTGPLGKSRGEMRRVALDELMQHPSPRWRPVPGNS
                     NFLGVYRWNILSEVQ"
     gene            2790..3047
                     /gene="rpsT"
                     /locus_tag="VE783_07675"
     CDS             2790..3047
                     /gene="rpsT"
                     /locus_tag="VE783_07675"
                     /inference="COORDINATES: protein motif:HMM:TIGR00029.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000312 - plastid small ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S20"
                     /protein_id="HYX53316.1"
                     /translation="MANHRSALKRARQTETRTTRNRANTSRLRTALRKFRAALQSGDA
                     KAVFPATVSEIDKAVRKGVIHKNTAARYKSRLNARLVATAK"
     gene            complement(3121..5181)
                     /locus_tag="VE783_07680"
     CDS             complement(3121..5181)
                     /locus_tag="VE783_07680"
                     /inference="COORDINATES: protein motif:HMM:NF014896.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prolyl oligopeptidase family serine peptidase"
                     /protein_id="HYX53317.1"
                     /translation="MPHEASLAAPPKTEVKEVKETLHGVEVVDPYRWLEDQDSLETRA
                     WINSENAYTDSLLEKLPGRDDVKNVVSGLLKVDFTSQPQARNGRYFFTHRSADQDQAA
                     LFMRQGAGGKDELLVDPLALSPEHAITVNLNFVSRDGSMIAYGLRKGGEDEVVLHLYD
                     VNARKDLPDQFPRARYSGIAILPDKTGAYYTKQTKDGPRVFFHKIGASVEQDSEIFGK
                     GYGPENLIGARLSEDGHYVTIVVSHGSAAEQEEIYCKDLKANGPITTIVNDLKATFSP
                     VVAGDRIFLETNWKAPKGRLVEIDLQHPGHDHWREVLAESDAVLEGVNAVGGRLVVDT
                     HKNVVTTLTVRDLNGKAIREITPPTMGSLGNVSGTFGSTEGFYSFSSFSTPQTIFRYD
                     VATGKQSIWFQPKVPLQPDQFEVKQVWYSSKDGTKVPMFVAHKKGMKLDGNNPTLLTG
                     YGGFNLSSNPGFNGFAAAWLARGGVYALANMRGGGEFGEEWHHAGMKEKKQNVFDDFI
                     AAAEWLIANKYTSPQKLAIRGTSNGGLLMGAMITQRPDLFGAVICGYPLLDMVRYQKF
                     LVARYWVPEYGSSDDPEQFKYIYAYSPYHHIKAGTKYPAVLFISGDSDTRVAPLHARK
                     MTALMQASQGGDKPILLHYDTKAGHSGGTPVSKQIENSTDEIMFLLWQLRTLQPVQTA
                     SGQK"
     gene            5483..8194
                     /locus_tag="VE783_07685"
     CDS             5483..8194
                     /locus_tag="VE783_07685"
                     /inference="COORDINATES: protein motif:HMM:NF013866.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prolyl oligopeptidase family serine peptidase"
                     /protein_id="HYX53318.1"
                     /translation="MNRALKGLLCLALMVSFGTAPAQKAAAPAKAAAASSAVPPVIDR
                     EIFFGNPEIAGAQVSPDGKYLAFIKPYKDTRNVWVKGVNEPFSAARLLTTETKRPIAG
                     YFWTRDGKYILYVKDNAGDENFNIFAVDPAAKPAAGADAPPSRDLTGVKGARVMIVDV
                     PKHDPDTIFIGLNDRDKAWHDLYKLKLSTGEKTLVRKNTDRIAGWEFDLNGNLRLATR
                     TDDAGSTEILRVDPDKLTQIYSCTVEESCGTIRFNKDGKHVYIQSNKGSADLASLMLL
                     DPETGKAEMVESDPLKRVDFGGALFSDVTDELVLTTYLDDKERHYFKDKTFEADYKFL
                     QSKLPGLEVGIPSRTKDEQVWVVNAFGDTEPGVTYLFNRKTHKLDKQFAIREKLPRTA
                     LAEMKPVRYKSSDGLEIPAYLTLPKGVAAKSLPLLVIPHGGPWGRDVWGYNTLSQFFA
                     NRGYAVLQPNFRASTGYGKKFLNAGNKQWGKLMQDDITWGVKYLVSEGIADPKHVGIL
                     GGSYGGYATLAGVTFTPDTYAAAVDIVGPSNLITLLESIPPYWESIRTVFHVRMGNPS
                     TPEGQAFLKSISPLTYADKIKTPLMVVQGANDPRVNKREADQIVIALRDRGFPVEYIL
                     APDEGHGFARPINNLAMYMAAEQFLAKYLGGRYQNGGSPEAVARLKELTVDPKSVVLA
                     KTLDAKAVGVPKPAADLQPGTYKYKATVSMGGQQMNINLTTTIKEENGMWVATGTMDT
                     PGGQATDVAIVEKGTLIVRKQDIQQGPVNINLQFTDKKATGKMNMNGQDRQVDADLGG
                     PLFGDASASELSLAALPLAEGYSTEFRNFDVRKQKEKLMELKVVGSESVTVPAGTFDT
                     YKVEVTSADGGGDKRTLWIAKDSRKPVKVTAVLAEMGGATLTQELVP"
     gene            complement(8253..9356)
                     /locus_tag="VE783_07690"
     CDS             complement(8253..9356)
                     /locus_tag="VE783_07690"
                     /inference="COORDINATES: protein motif:HMM:NF013073.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NlpC/P60 family protein"
                     /protein_id="HYX53319.1"
                     /translation="MKCAVKFGSPLCLAILFLASMAHAREGDDSAGQLLSAEQGQALA
                     DFAARSGPGVRPKPDCSHLVHLLYSRAGLNYEYQESRRLRLGVPEFARVKTPQPGDLV
                     VWPGHVGIVLSPEEKIFLSSVRPGITTQAWDDDYWSSRGRPRFLRYIVGPQADLAMLA
                     DVGQRSSSSGPVKAARAIAETPDSSMASSEAAPSDDDRVPAALATIHQRSKPDKQDIA
                     NSFNRGGIDLARRLLGGQSLGAGTSVSIVERVEVKQLKIKHQEGTIRLKLTETLALEH
                     GRAKPGGVVERELMLDRRDGAWIISDPNRRLYIPRQDAEQVLEKQLQLMLQDDSDNTD
                     KRSLVRALNLLYDREDAGARRASAVPPAVSHTR"
     gene            9587..9961
                     /locus_tag="VE783_07695"
     CDS             9587..9961
                     /locus_tag="VE783_07695"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53320.1"
                     /translation="MEEPRPVLPRRIGMTLLGMMICWLFNLVQFGVTFWLFLIFGESF
                     LAAAYTLIGGIGLLQIAYIIPLYRLLRRKNLPDAARGLALAACLTAMITAGFDVIAFR
                     HFHSLPPPPRARIFTIYLARKG"
     gene            10071..11285
                     /locus_tag="VE783_07700"
     CDS             10071..11285
                     /locus_tag="VE783_07700"
                     /inference="COORDINATES: protein motif:HMM:NF001923.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Nramp family divalent metal transporter"
                     /protein_id="HYX53321.1"
                     /translation="MWRYFGPAFVASVAYVDPGNFASNFEGGARFGYSLLWVLLWSNA
                     MAILIQYLSAKLGIATGKTLPQNCRDYFTKKTNIGLWIAAELAALATDLAEFLGAALG
                     FYLLFGIPLFIAALFTAVIVFLMLAVELYGFRRLEQLVMAFVFAIAACYAFEMVIVKP
                     DWGAVAHGVLVPHINSESIYVAVSMLGATVMPHVIYLHSALVQHRVKEDAQKSEQEQW
                     HLTVKHLRYELFDVLAAMNGAWLINSAMIVMAAAVWFRTGTPFTFDEAHLTLRPILPA
                     VSGAAFGMALLFSGLSSSTVGTMAGQVIIEGFLDVKFSVFLRRLITIIPSLVVIALKL
                     DPLKILVLSQVVLSFAIPFALVPLVLLTRSKSVMEDMVNRRPTNVMAYVVTAVIVGLN
                     LLLLYRFVGGTF"
     gene            11357..14146
                     /gene="acnA"
                     /locus_tag="VE783_07705"
     CDS             11357..14146
                     /gene="acnA"
                     /locus_tag="VE783_07705"
                     /EC_number="4.2.1.3"
                     /inference="COORDINATES: protein motif:HMM:NF006757.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003994 - aconitate hydratase activity
                     [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aconitate hydratase AcnA"
                     /protein_id="HYX53322.1"
                     /translation="MNTFGSRSKLRVGAQEFEIYRLDAMEKHGCNPMRLPYTLRILLE
                     NLLRTENGRSVTGEDINFLADWKPQAIPDKEIAFTPARVLMQDFTGVPAVVDLAAMRD
                     AMKKMGGDPNLINPLQPAELVIDHSVQVDEFATVNAFGVNARLEFERNQERYAFLRWG
                     QSAFHNFKVVPPDMGIVHQVNVEYLARVVFSQQKNGAAQAYPDTLVGTDSHTTMINGL
                     GVLGWGVGGIEAEAALLGQPVSMLLPQVVGFKLTGSLKEGATATDLVLTVTEILRKTG
                     VVGKFVEFFGPGLDHLPVADRATIGNMAPEYGATCGFFPVDQATLDFLRTTGRSNDQV
                     ALVEAYCKEQGLFRTAGSEQAEYSQVVELDLSTVEPSVAGPRRPQDRASLSKARESFE
                     SALPTLIGPRGAKTGGVKPAPQQVARYEAEGGMTAVAVEDPAAPAATKSLGDDIFEQL
                     HDGSVVIAAITSCTNTSNPSVMMAAGLLAKNAVEKGLERKPWVKTSLAPGSRVVTEYY
                     RKAGVLPYLEKVGFHVVGYGCTTCIGNSGPLPADVSYAINEKELVVVSVLSGNRNFEG
                     RINSEVRANYLMSPPLVVAYALAGRMDLDITRDPLGRGKDGKPVYLRDIWPTQKEVAD
                     AIAGAIDSSMFKHNYETIFEGDEEWKKLRVPEGETYAWPESTYIKRAPYFDDMPAQPA
                     PVKDIKGARVLAKLGHSVTTDHISPAGSIKTASPAGKYLQEHGVKPADFNSYGSRRGN
                     HEVMVRGTFANVRLRNRLVPESEGGITRHFPSGEEMSIFDASVKYIHEGVPLIVLAGR
                     EYGSGSSRDWAAKGPLLLGIRAVIAESYERIHRSNLVGMGILPLQFLPEEDPETLGLN
                     GNEVYEIVGLAAMLASRFANGRQVKVRATSEDGKVNEFDALVRIDTPQEILYYEHGGI
                     LQFVLRQLAARKQSA"
     gene            14374..14658
                     /locus_tag="VE783_07710"
     CDS             14374..14658
                     /locus_tag="VE783_07710"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53323.1"
                     /translation="MATIRCDQHGVSHEAFVCKHLVYGKYLGFFCDLDDHGNPFPDAW
                     CNGCELIRLEYQGWSDATEDLMEIAMVCGGCYEEIKERNLLGSESSSALQ"
     gene            14927..17035
                     /gene="fusA"
                     /locus_tag="VE783_07715"
     CDS             14927..17035
                     /gene="fusA"
                     /locus_tag="VE783_07715"
                     /inference="COORDINATES: protein motif:HMM:NF009381.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003746 - translation elongation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006414 - translational elongation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor G"
                     /protein_id="HYX53324.1"
                     /translation="MKVYEGKDIRNLVVIGHSHSGKTSLVSAMLYTSGATPKLGRVDD
                     GSTITDYDEEEIARQMTVSLGIAPLEWHNTKINVLDTPGFTLFAHEAKVAMRAAEAAL
                     VVVDGVAGVEVVTEKVWQYAEEINLPRVIVVSRMDRERANHETALESLVNAFGRQVVP
                     VQLPIGSEKNLTGVVDLVTMKAYTYELGGTGKGKEGPIPANLEAAAKDAHEKLVEIVA
                     EGRDDLMEEFFDKGTISEEHLIPALHEAIKEDKIFPVLFASGLGNIGTDHLMDFVVDY
                     FPTAAEHATVTAAPEASDNGHAAERHVSDSDPTSLYVFRTANDPFAGRITYFKVFSGL
                     VKNDATLQNFTRGTTEKLAHLSVPQGKNLLPVPELHAGDIGAVAKLKDTVTGDTLGDK
                     ANPIQYPAVVLPEPAITFAIEPKSRNDEDKLSNGLHKLMEEDPMVRFFRDEQTKEFLI
                     AGTGQQHIEVIVSKLKKRYHTEVNLKAPKVPYRETIRGRADVQGRHKKQSGGHGQYGD
                     CKIKMEPMERGKGFEFVNDIFGGAIPKNYIPAVEKGIVEAAQRGYLAGFPVVDFKVIL
                     YDGSYHDVDSNELSFKTAGRIAFKKAMEQAKPTLLEPIMKVEITIPDEFAGSIMGDLN
                     SRRGRIQGMDNKAGKTVVKAEVPMAEMLTYGADLTSMTQGRGSFNMEMSHYDFVPAVS
                     QEKIVAQFKAERGELVEVEE"
     gene            17038..17565
                     /locus_tag="VE783_07720"
     CDS             17038..17565
                     /locus_tag="VE783_07720"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53325.1"
                     /translation="MFYPERTRGNPIPIKLVVGVVILAAIQVGGQSQSKATPISSQTS
                     LSPNALYDLPGPFTPIATISELPQPVKAALAMAFRQNTLQIADPGKPFNATDVVDERL
                     PMRRLIFAGQAGERFVVHYERGGRGHSYYALVFDVKDHNSAALIGAASYRQAARNIAK
                     LKSLRHNDISNSRSF"
BASE COUNT         3738 a         5162 c         5015 g         3762 t
ORIGIN      
        1 tctctccggc tctcatcggt aacgcgggcc tccacccggt agcgatagtc actctttcgg
       61 ctgtccagcg tggtggggaa ggtgattttc aggcggccgt tggcgtccag cctgccggtt
      121 tgttcggaaa gttgctgccc accgtagtca tactcgggcg catcgctgga gcggccgtag
      181 tcacctccac cttcaccttc gaagccctca aaatctccaa aggagtcgtc gtagaaatct
      241 tcatcgccaa aaactggcga ccagtacacc gagcgatgca ccacatattt cacttctgcg
      301 ccggcaaccg gctctccgaa gaagtatctg gcctcaatgg ttgccctggc cgtctctccc
      361 tcaagaatcc gaggcttgtc cggcgtcacc cggacttcat attcaggctt cttgtattcc
      421 tccacgttga agccgccgct catggggtag ctttcggtcg ggctgtcgga cctgaacaca
      481 atggagtagt agcccagcgc cgcatcctgc gccaggttga agtcgccgtg aacgctgccg
      541 aaagcggaga ccgtggcctt gctcgtgtac acctctttgc cggccgaatc ctggacgcta
      601 acgttcaacg ccattcctgc cggcacgcta tagcgctcgc cattgtgttt gcgcacgatg
      661 gctttgaagt ggacggtatg gccgggccgg taaaccgggc gatcactgta aacgtagccc
      721 gtccagtctg cccccgggtt gctgctccaa ttgaaatatt cccctgcgac cagcgccacc
      781 tgcttctcat gggtcgcgaa taccctgatg tcctgctcgt tctcagcttt taccgccagc
      841 gtggcgagac cctgcgcatc tgtgttgacc gcggcctgtt tcttgtggtc ccaccagacc
      901 tccacctgcg tgcccggcac cggagcgcct gacgtccgct cgacggaata gaacagaacc
      961 tggcctggag cgctgcgcat caccagcgcg agccgggaga cgatcaccac cgtgtaggcg
     1021 cggagctgtc catcggtcgc ttccaccaca taggcgcctt cttccagcga ctcaaccggc
     1081 acgtcctgcc gttcagagag gtaatgggaa ggcacttcct gccgccagcg cgccaccagc
     1141 tgctgctggt tcagcactgg cacctgcgca aacaccgcag agggtccggc cttcttgttc
     1201 ttgttgcctt cctgctcgcg gatctcagcg cgggatcgat cggagaattg gtcgcggaag
     1261 aaattgcgaa tgcgcacaaa cttacgccgc ttccagtcgt gaaaacgctc aatccacgtc
     1321 ttctggtcga tctgctcctt ttcctcgtaa cgacccgctc caaagccgtg gatgtcgcgc
     1381 agcttctcga agaagagcac cgggtcgttg acgcgataca tccgaaattc aagcgcatgt
     1441 acatcacggg tgtacatgtg gatggtgacc ttctcatggg gcgcaaaggt tttgtccgtg
     1501 ctgagagaaa agtacggggc ggcattcgcg gctccggatg agataacacc gaagaccgcg
     1561 cagacgaaaa gtttccaaat tgcgccgcga tcgcgcatca ctgcacctcg ctgagaatgt
     1621 tccatcggta aactccgaga aaattgctgt tgccaggcac cggccgccaa cgtggcgacg
     1681 gatgttgcat cagctcgtca agggccactc ttctcatctc gcctcgcgac ttccccagcg
     1741 ggcctgtgtg gtacaccacg attgcgcctt ccgcgcccgc gtgtgccagc cggctacgtc
     1801 ccaggtagat catcgagtga taggagttct gttccagctg gcggtagaag agcagatcgc
     1861 cagggcgggc cacacgaacg tcgcgggaaa ccaggaaggt gttgaaccgc cagagcgttt
     1921 ttgcatcggc aaactccgcg taatcggctt tatcctccct gcccgattcc ggcggcgtaa
     1981 tccggaagat tcccgcgccc agcggcgtac gcggatacgc gtatttccca accgagggca
     2041 gcgaacccag tgcttctagc ttgttctgca ccagccactc tgcagtgtgc gcgtgcaggg
     2101 cgccacgata cgaataacgc agcagggcgg cacaatcgtt gatctcggcc ggtaaatcgt
     2161 ttgcgtcccg caatgactga tattcagcaa tcgccgtgaa ccagcttcgg aatgcatcgc
     2221 gatcggcggg agaatcaagg tgcagatagg gagatgggct gatggccgcg ggtgtcccgg
     2281 tacctgcaaa agacgtcaaa acaccggcca gcaggaggac acacgcacag caaccaggaa
     2341 tctttgctga agggatcatt tgttgtcggg ggtaagcgga actataacac cggagtgccg
     2401 ttcagctcga attactttgg ccccacactc actcaattgc attcatgtac ccacttccct
     2461 tcacgcgaaa gagcgcgagt tccacgacca accgtaagca gctcagtgtg tgtagcgata
     2521 cacattgtgt aggacatgac acgggaagaa aatccggaaa cgcttccgaa ccggtgatag
     2581 cgccttcctc cggtcctccc ttcaccgcct ttagcccgtt cagttggctg tgcttgacaa
     2641 ccctactttt tgctgctctc cgtgtctccg tgcctcagtg gtgagctctc agcccagcag
     2701 ctcccggttg accgtttcag ctaaacgcaa gtaaaataag tctttcgggc ttacctccga
     2761 aatattccaa gaggaaacta accagcaaca tggcaaatca tcgttcggcg ctgaagcgcg
     2821 cccgtcagac cgagacccgc accacgcgca atcgcgccaa cacttcacgc ctgcgcaccg
     2881 cgctgagaaa gttccgcgcc gcccttcaat ccggcgacgc caaggcagtt tttcctgcca
     2941 cggtatctga aattgacaag gctgtgcgca agggcgtgat ccataagaac actgcggcca
     3001 gatacaagag ccggctcaac gcccgtctgg tagctactgc aaagtaaagt ctttccggtt
     3061 tctgttttca aaaagcaaaa ggcccgccat tgtggcgggc ctgctttttc gtgcagaaag
     3121 ttacttctgc ccagacgccg tctgcaccgg ctgcagcgtt ctcagctgcc acagcaggaa
     3181 catgatctcg tccgtactgt tctcaatctg cttgcttact ggggtgccgc cggagtggcc
     3241 cgccttggtg tcatagtgca gcaggattgg cttgtctcct ccctgcgagg cctgcatcag
     3301 cgccgtcatc ttgcgggcat gcagcggagc cacacgcgtg tctgagtcgc cgctgatgaa
     3361 cagcaccgcc ggatatttcg ttccggcctt tatgtgatgg taaggcgagt aggcgtagat
     3421 gtacttgaac tgctccggat cgtcagacga tccgtactcg ggcacccaat atcttgccac
     3481 caggaatttc tggtagcgga ccatgtcaag gagtggataa ccgcagatca ccgccccaaa
     3541 caagtcaggc ctctgcgtga tcatggcacc cattagcagg ccaccgttac tcgttccgcg
     3601 gatggccagc ttctgcggcg aagtgtactt gttcgcaatc agccactcgg cggcggcaat
     3661 gaagtcgtca aaaacgttct gctttttttc cttcatgccg gcatggtgcc attcttcgcc
     3721 gaactcgccc ccgccacgca tgttggccag tgcatagacg cctccgcgcg ccagccatgc
     3781 agcggcaaaa ccattgaagc cgggatttga actcaggttg aatcctccat acccggtcag
     3841 cagcgtggga ttgttcccat ccagcttcat gccttttttg tgcgccacaa acatcggcac
     3901 tttggtccca tcttttgagc tgtaccagac ctgtttcacc tcaaattgat ctggctggag
     3961 tgggactttg ggctggaacc atatgctttg ttttcctgtg gcaacgtcat accggaaaat
     4021 ggtttgcggc gtggagaacg aactgaatga atagaaacct tccgtgctcc cgaatgtgcc
     4081 ggagacattt cccagtgaac ccatggttgg cggggtaatc tcacgaatcg ctttaccgtt
     4141 caggtcgcgg acggtgaggg tggtaaccac gttcttgtgg gtgtcaacga ccaacctgcc
     4201 ccctacggca ttcacgcctt ccagcactgc atcgctttcg gccagcactt cacgccagtg
     4261 atcgtgcccc gggtgttgca ggtcgatttc aaccagccgt cccttcggcg ctttccagtt
     4321 ggtttccagg aaaattctgt caccggccac aacaggcgag aacgtcgctt tcaagtcgtt
     4381 cacgatcgtg gtgatcgggc cattcgcctt caggtccttg caatagattt cctcctgctc
     4441 cgcagccgat ccatgcgaaa ccacaatcgt gacgtaatgg ccgtcttccg agagtcttgc
     4501 accgatgaga ttctccgggc catatccttt gccaaagatt tcggagtcct gctccacgct
     4561 ggcgccgatc ttgtggaaga agacgcgcgg cccgtctttc gtctgctttg tgtagtaagc
     4621 gccggtcttg tcgggcagga tcgcgattcc gctgtagcgg gcccgcggga actggtccgg
     4681 caggtccttc cgcgcgttca cgtcgtaaag gtgcagcacc acctcgtcct ctccgccctt
     4741 gcgcagtccg taggcgatca tgctgccgtc gcgggagacg aaattcaggt tcacggtaat
     4801 ggcgtgctcg ggactgagcg ccagcgggtc aaccagcagt tcgtctttgc cgcctgcgcc
     4861 ctgtctcata aacaatgcag cctggtcctg atcggcactg cgatgggtga agaagtaacg
     4921 cccgttgcgc gcctgcggct ggctggtgaa gtcgaccttc agcaacccgg agacgacgtt
     4981 tttaacgtca tcgcgcccgg gcagcttttc cagcaatgaa tccgtgtagg cgttctcgct
     5041 gttgatccat gcccgcgttt ccaggctgtc ctggtcttcc agccagcgat agggatccac
     5101 cacttccacg ccgtgcagcg tctcttttac ctctttgact tcagtcttcg gcggagccgc
     5161 aaggctcgcc tcgtgtggca tttgtgccca tgcaactgaa aacaggagga gggtgatgaa
     5221 acttacagta gtcctgaaac gtatggtcat tgtgagggac tccggagggc cgccaattca
     5281 cacgcgtagg ggcgggaact ctgatgatcg ccgcgattct attaaccctt tgccgcaggg
     5341 tcaagacata cggggctgac cggagcggcc agtgactaag tttgtttatc actggacagg
     5401 tatgtggctg cgggatgaga attaggatcg agttcccctg cctttggtac gtatttcttc
     5461 ctgaatgaaa ggatttccct gcatgaatcg agctctgaaa ggcctgttgt gtctggccct
     5521 gatggtgagc ttcggcactg cgcccgcgca aaaagctgct gccccggcga aagcagccgc
     5581 ggcctcctcc gctgtgcctc ccgtcatcga ccgcgaaatc ttctttggca accccgagat
     5641 tgccggcgcc caggtctctc ccgacgggaa gtacctggcc ttcatcaaac catataaaga
     5701 cacccgcaac gtctgggtga aaggcgtgaa tgagcccttc agcgctgccc gcctgctgac
     5761 tacagagacc aaacgtccta tcgccggcta cttctggacc cgcgacggca agtacatcct
     5821 ttatgtgaag gacaatgccg gtgacgaaaa tttcaacatc ttcgccgtcg atcctgccgc
     5881 caaacctgcc gccggcgcag acgcgcctcc ttcgcgcgac cttaccggag taaagggggc
     5941 acgcgtgatg atcgtggatg ttccgaagca cgatccggac acgattttca tcgggctcaa
     6001 cgatcgtgac aaggcatggc acgatctcta caagctgaag ctttcgaccg gcgagaaaac
     6061 gctggtgcgc aagaatacgg accgcatcgc cggctgggag ttcgacctga atggcaatct
     6121 ccgcctggcc acccgtactg acgacgcagg gagcacggaa atcctgcgag tggatcccga
     6181 taaattgacg cagatctatt cctgcacggt ggaagagagc tgcggaacca tccgcttcaa
     6241 taaagacggc aagcacgttt atattcagag caacaaaggt tcagccgacc tggcttcgct
     6301 gatgctgctc gacccggaga ccggcaaggc tgagatggtg gaatccgatc cgctcaagcg
     6361 cgtggacttt ggcggagcgc ttttctctga cgtgactgat gagctggtgc tcaccacgta
     6421 tttagatgac aaagaacgcc actacttcaa agacaagact ttcgaagcgg attacaagtt
     6481 cctccaaagc aaactccccg gactagaggt tggcatccct tcgcgcacca aagatgagca
     6541 ggtttgggtc gtcaatgcgt tcggagacac agaacccggt gtcacgtatc tgttcaatcg
     6601 caagacgcac aagctggata aacagttcgc gattcgtgag aagctgccac gcacggctct
     6661 agcagagatg aagccggttc gctacaagtc ctcggacggg ctcgagattc ccgcgtacct
     6721 gaccttgccg aaaggcgtcg cggcgaaatc acttccgcta ctggtaattc cgcatggcgg
     6781 cccttggggc cgggacgtct ggggctataa cacgctgtca caattcttcg ccaatcgtgg
     6841 ctacgctgtg ctccagccca acttccgcgc ctccactggc tatggcaaaa agttcctcaa
     6901 cgccggcaac aagcagtggg gcaagctcat gcaggatgac atcacctggg gcgtgaagta
     6961 cctggtgagt gagggcattg ctgatcccaa acacgtgggt attctcggag gttcgtacgg
     7021 gggttatgca acgctcgccg gcgtcacctt cactccggat acctacgcgg cagccgtgga
     7081 catcgttggt ccttccaacc tgatcacgct gctggaatcg attccgccgt actgggaaag
     7141 catccgtacc gtcttccacg tgcgtatggg caatccctcc acaccggaag gtcaggcgtt
     7201 tctcaagtcc atttctccgc ttacgtatgc agacaagatc aagacgccgc tgatggtggt
     7261 gcagggcgcc aatgatccgc gcgtgaacaa gcgcgaagcg gaccagatcg tgattgctct
     7321 gcgagatcgc ggcttcccgg tggaatacat ccttgcgccc gacgagggac acggatttgc
     7381 gcgccccatc aacaaccttg ccatgtacat ggctgcggag caattcctgg ccaagtacct
     7441 ggggggccgt taccagaatg gcggctcgcc ggaagctgtg gcgcggttga aggagctcac
     7501 ggttgatccg aaatccgtgg ttctggcaaa gaccctcgac gcaaaggcgg tcggcgttcc
     7561 caagccggca gccgatctcc agccgggcac ttacaaatac aaggctaccg tctccatggg
     7621 cggccagcag atgaatatca atctgaccac cacaatcaag gaagagaacg gtatgtgggt
     7681 ggccaccgga acaatggata ctcctggggg gcaggccacc gatgtggcga ttgtggagaa
     7741 gggcacgctg atcgtgcgca aacaggatat ccagcagggt ccggtgaata tcaacctgca
     7801 gttcactgac aagaaagcca ccggcaagat gaacatgaat ggccaggacc gtcaggtcga
     7861 tgccgacctg ggcgggccac tattcggcga tgcctccgct tccgagcttt cgcttgcggc
     7921 cctgccgctg gcggaaggct acagcacaga gttccgcaac ttcgatgtcc gcaagcagaa
     7981 agaaaagctg atggaactca aagtggtggg aagtgagagt gtcacggttc cggccggaac
     8041 gttcgatacc tacaaggtcg aagtcacttc agccgatgga ggtggggaca agcggacgct
     8101 ctggatcgcc aaagactcgc gcaagccggt gaaagttacc gccgtactgg ctgagatggg
     8161 cggcgcgacg cttacacagg aactggtacc gtaaaccggc tccattcaat ccctggcgcg
     8221 ccttcggcaa tgctgaaggc gcgtcttctt ttttatcttg tgtggctgac ggcaggtggc
     8281 acagcactgg cgcgcctggc gccggcatct tcacgatcgt agagaaggtt cagcgctctg
     8341 accaaagaac gcttgtcggt gttgtctgag tcgtcctgaa gcatcagctg gagctgcttc
     8401 tccagcactt gctccgcgtc ctgacgcggg atatatagtc tccggttggg atcggagata
     8461 atccatgcgc catcgcgccg atcgagcata agctctcgct ccaccacgcc gccgggcttc
     8521 gctcttccat gctccagcgc aagcgtttcg gtcagcttca ggcggatggt gccctcttgg
     8581 tgcttgatct tgagctgctt tacttccacg cgctccacga tcgataccga tgtccccgcg
     8641 ccgagcgact gtccaccaag caaccttcgc gcgagatcga taccacctcg gttgaatgag
     8701 ttcgcaatgt cctgcttgtc gggttttgaa cgctggtgaa tcgtagccag cgctgccggt
     8761 actctatcgt catccgaggg cgcagcttcc gatgaagcca ttgacgaatc cggtgtttct
     8821 gcaatcgcgc gtgctgcctt cacgggaccg gagctgctgc tacgctggcc aacatcagcc
     8881 agcatggcca ggtctgcctg tggacccact atgtaacgca agaatcgcgg cctgccgcga
     8941 gaggaccagt aatcgtcatc ccatgcttgc gtggtaatcc ccggccgcac agagctgaga
     9001 aatatctttt cttccggcga gagcacaatt ccaacatgac ccggccagac caccagatcg
     9061 ccgggctgcg gtgtcttcac gcgagcgaat tcaggcacgc caagccgcaa tcgtcgcgat
     9121 tcctggtact cataattaag tccggcgcgc gagtacagca ggtgcaccag gtgagagcag
     9181 tccggtttgg gacgaactcc aggaccggag cgcgctgcaa aatccgccag agcctgccct
     9241 tgctcggccg agagtaactg accggcggag tcgtcgccct cgcgcgcatg cgccatcgac
     9301 gcgaggaaca agatcgcgag gcaaagcggc gatccgaatt tgactgcgca cttcatggtc
     9361 gctataagcg tccagctatt ttctgatgat tccagcagtt ttactgctgc caactggccc
     9421 cgcggcatcc cggaagtaca tgcacacctg tttccaccca agggagctat agggaacggc
     9481 aaagcacgac agaacctcaa aaatattttt gtcgcgggaa agcactctat ttgattgcgg
     9541 taatatcatg agccactttc gatcaattcc cgctgagagg ccgcgaatgg aagagccccg
     9601 ccccgtcctg cctcgccgaa tcggcatgac gttgctcggc atgatgatct gctggctatt
     9661 caacctggtc caattcgggg tgacgttctg gttatttcta atctttgggg agagcttcct
     9721 ggcggctgcg tacaccctga tcggcggcat tggcctgctc caaattgctt acatcattcc
     9781 cctataccgg ctgttaaggc gcaagaacct gcctgacgcc gcccggggcc tggcgctggc
     9841 cgcctgccta acggccatga ttacagccgg ctttgatgtc attgccttcc gccacttcca
     9901 ttcactgcct ccgccgccga gagcccgaat tttcactatc tacctcgcaa gaaagggcta
     9961 acgggcggca acggcttttt cgtatactga gttgctttat ggctgcgccc gtggcttccc
    10021 ccaaacctcc gaggaggtta agacttctcc cgacgctgaa aagcggggag atgtggcgct
    10081 atttcgggcc cgctttcgtt gccagcgtgg cctatgtgga tccgggaaac tttgccagca
    10141 actttgaagg cggcgcccgg ttcggctact cgcttctgtg ggtgctgctc tggtcgaacg
    10201 ccatggccat cctcatccag tacctctcag ccaagctggg gatcgcgacc gggaaaacgc
    10261 tgccgcagaa ctgccgcgac tacttcacca agaaaaccaa tatcggcctc tggattgctg
    10321 cggaacttgc cgccctggct accgatctgg ctgagttcct gggtgccgcg ctcggctttt
    10381 acctgctctt tggaattcct ctgttcatcg ccgcactgtt cacggctgtg atcgtgtttc
    10441 tgatgctggc ggtggaactc tacggcttcc gccgtcttga gcagcttgtg atggccttcg
    10501 tgtttgcgat tgctgcctgt tacgcgttcg agatggtcat cgtcaagccg gactggggcg
    10561 cggtggccca tggggtcctg gtgccccaca tcaattccga aagtatctat gttgcggtta
    10621 gcatgctggg tgcaacggtg atgcctcacg tgatctatct gcattccgct ctggttcagc
    10681 accgcgtcaa agaagatgcg cagaagagcg agcaggagca atggcatctg acggtgaagc
    10741 acctccgtta cgaactgttt gacgtgctgg ccgccatgaa cggcgcctgg ctgatcaact
    10801 ccgccatgat cgtgatggct gcggcggtct ggttccgcac tgggacgccg ttcaccttcg
    10861 acgaagctca cctcacactg cggccgattc tgcctgcagt ttcaggggcg gcattcggca
    10921 tggcgctttt gttttccggg ctgtcttctt ccacggtcgg caccatggct ggccaggtaa
    10981 tcattgaagg ctttctggac gtaaagttca gcgtttttct gcggcggttg atcacgatca
    11041 ttccttcact ggttgtgatc gcgctcaaac tcgaccccct gaagattttg gtactatctc
    11101 aagtggtgct gagttttgcg attccgttcg cgctggtgcc gcttgtcctg ctcacccggt
    11161 caaaatcagt gatggaagat atggtgaacc ggcggcctac gaacgttatg gcttacgttg
    11221 tgactgccgt gattgtgggc ctgaatctct tgctcctcta ccgcttcgtc ggcggaacat
    11281 tctaaagcgg tcccccaggc aagcgagcct ccgcagcgcg cacgcgaatc caatcaggaa
    11341 ggtggacttt attcatatga atacattcgg cagccgttct aaattgcgcg ttggcgccca
    11401 ggaatttgaa atttatcgcc tggacgcgat ggaaaaacat ggatgcaatc ccatgcgcct
    11461 tccgtatacc ctccgcatcc tgctggaaaa cctgctgcgc accgaaaatg gccgcagcgt
    11521 aaccggggaa gacatcaact ttcttgccga ctggaagccg caggcgattc ccgacaagga
    11581 aatcgccttc acacctgcgc gcgtgctcat gcaggacttt accggcgttc cggccgtggt
    11641 tgatctggcc gccatgcgcg acgccatgaa gaagatgggc ggcgatccga acctgatcaa
    11701 tccgctccag cccgcggaac ttgtgattga tcactcggtg caggttgacg aattcgcaac
    11761 cgtaaacgcc tttggcgtga atgcgcggct tgagtttgaa cgcaaccagg agcgctacgc
    11821 cttcctgcgc tggggacaat cggcgttcca caatttcaag gtggtgccgc cggacatggg
    11881 cattgttcac caggtaaacg tggagtatct ggcccgcgtg gttttctcgc agcagaaaaa
    11941 cggagcggcg caggcttatc ctgacacgct tgttggcaca gattcgcata ccaccatgat
    12001 caacggcttg ggcgtgctcg gctggggtgt gggcgggatt gaagccgagg ctgcgttgct
    12061 cgggcagcct gtttccatgc tgctgccgca ggtggtgggt ttcaagctaa ccggttcgct
    12121 gaaagaagga gccactgcca cagacctcgt cctcacggtg actgagattc tgcgcaaaac
    12181 cggagtcgta ggcaagttcg ttgagttctt cggtcccggg ctcgaccacc tgccggtggc
    12241 tgatcgcgcc accattggca acatggcgcc ggaatatggc gctacctgcg gattcttccc
    12301 cgtggatcaa gcgacgcttg attttctgcg caccaccggc cgcagcaatg atcaagttgc
    12361 actggtggaa gcctactgca aagagcaggg cctgttccgc accgcgggca gcgaacaagc
    12421 tgagtactcg caggtggtgg aacttgattt gagcacagtg gagccgagcg ttgccggacc
    12481 gcggcgtccg caggaccgcg cttcgctttc caaggcccgc gaatcattcg aatcagcgtt
    12541 gccaacactc atcggtccgc gtggtgcaaa gaccggaggc gtcaaaccgg ctccgcagca
    12601 ggtggctcgt tatgaagctg aaggcggcat gaccgcggtg gctgtggaag atcctgctgc
    12661 tccagccgct acaaagagcc tgggcgacga tatcttcgag caactgcatg atggctcggt
    12721 ggtgatcgcg gcaattacaa gttgcaccaa cacctcgaat ccttccgtga tgatggcggc
    12781 cggcctgctc gcgaagaacg cagtggaaaa aggtcttgag cggaagccgt gggtgaagac
    12841 ttcgctcgcg cccggttcgc gcgtcgtcac cgagtactac cgcaaagccg gcgtgctgcc
    12901 gtatctggag aaagttggct tccatgtagt cggctacggc tgcacaacat gcatcggcaa
    12961 ctccggcccg cttcccgcgg atgtgtctta cgccattaac gagaaagagc tggtcgttgt
    13021 ctctgtgctt tccgggaatc gcaactttga agggcgtatt aactcagagg tgcgcgcgaa
    13081 ctacctgatg tcaccgccgc tggtggtcgc ctacgcgctc gccggacgga tggacctgga
    13141 tattacgcgc gatccactcg gccggggcaa agatggcaag ccggtttacc tgcgcgatat
    13201 ctggccgacg cagaaggaag tggcggacgc aatcgccgga gccattgatt ccagcatgtt
    13261 caagcacaac tacgaaacca tctttgaagg cgacgaggag tggaagaagc tgcgcgtacc
    13321 cgaaggggaa acttatgcat ggccggaatc cacctacatc aaacgcgctc cgtacttcga
    13381 cgacatgccg gcgcaacccg cgcccgtgaa ggatataaaa ggcgctcgcg tattggcgaa
    13441 gctcggccac agcgtgacca ccgaccacat ctctcctgca ggttccatca agacggccag
    13501 tccagccgga aaatatctcc aggagcacgg cgtgaaaccc gccgacttca attcttatgg
    13561 ttcgcgtcgc ggcaaccatg aagttatggt gcgtgggaca tttgccaacg tgcggctgcg
    13621 taaccggctg gttccggagt cggaaggcgg catcacgcgc catttcccga gcggggagga
    13681 gatgtcaatc tttgatgcca gcgtcaagta catccatgag ggcgtgccgc tgattgttct
    13741 ggcgggaaga gagtacggct cgggctcctc gcgtgactgg gcggctaaag ggccgctgct
    13801 cctcggcatc cgggcggtca tcgccgagag ttatgagcgc attcaccgct cgaatctggt
    13861 cggcatgggc atccttccgc tgcagttcct tccggaagaa gatccggaga cgctcgggct
    13921 aaacggcaat gaggtttatg aaatcgtcgg cctggcggca atgctggctt ccaggttcgc
    13981 taatggccgt caggtgaaag tccgagccac ctctgaggat ggcaaggtga acgagttcga
    14041 tgcgctggtg cggatcgata caccgcagga aatcctctat tacgagcatg gcgggatcct
    14101 gcaatttgtg ctgcgtcagc ttgcggcgcg caaacaaagc gcctgaacct gcatccaatc
    14161 cagagtaccg gcggagattg caccgcattg tgggcactct gccgggtgag tcttaagtct
    14221 atgaacctta agctaacatc attaagattc atggtttaca gtttccgaac agcttaaaaa
    14281 tgtccccttt ccccttgtaa atcgggagta agataagaac caaggatggg tctaagttcc
    14341 gggtaagtta gcgccgcttg cttgaggtgg tgaatggcaa caatccggtg cgaccagcat
    14401 ggtgtaagcc acgaagcttt cgtgtgcaaa cacctcgtct acggcaagta tctgggcttt
    14461 ttctgcgacc ttgatgacca cggcaatccc tttccggacg catggtgcaa cgggtgcgag
    14521 ctgatccggc tggaatatca gggctggtct gatgccaccg aagacctgat ggaaatcgcc
    14581 atggtgtgcg gcggctgcta cgaggaaatc aaggaacgca acctcctcgg cagcgaatcc
    14641 agctccgccc tgcagtagct cacgcactac tgcttatccc tgccgcgctc agtgcaactc
    14701 gcgcgtcttc atgtacgcgc ttcaggcgcc aacccggagt cagttttctc ctggtctgct
    14761 ctttgcaaaa gcgcaattcc agcgggataa tgttgtgttt aacgacttct taatacgtcc
    14821 actggagccc gcgaccctct tgaccaaaag ttaaaccacc aagtagaact tttcggatca
    14881 atgcgcctgc actccggccg gggcttgcca atttgaagga ggcactttga aggtttacga
    14941 aggcaaggac atccgcaatc ttgtggtaat tgggcactcc cattctggaa agacctccct
    15001 ggtgtccgcc atgctctata ccagcggcgc cactcccaag ctgggccgtg tggacgatgg
    15061 ttccacgatc accgactacg acgaagaaga gatcgcgcga cagatgacgg tctcgctcgg
    15121 catcgcgcct ctggaatggc acaacaccaa aatcaacgtg cttgatacgc ccggattcac
    15181 gctcttcgca catgaagcca aagtagcgat gcgcgccgcg gaagccgcgc tggtggtggt
    15241 ggatggcgta gccggagtgg aagttgtgac ggaaaaggtc tggcagtacg cggaagagat
    15301 caacctgcca cgcgtgatcg tggtgagccg catggaccgc gagcgcgcca accatgaaac
    15361 ggcgctggaa agcctggtca acgcgttcgg gcggcaggtg gtgcccgtac agctgcccat
    15421 cggcagcgaa aagaatctca ccggcgtggt ggacctggtc acgatgaagg cctacaccta
    15481 tgaactgggg ggtactggga aaggcaagga aggtccgatt cccgccaatc ttgaagccgc
    15541 cgcgaaagat gcccatgaaa agctggtgga aatcgtcgcc gagggcagag atgatttgat
    15601 ggaagaattc tttgataagg gcaccatctc tgaagagcac cttataccgg ctctgcatga
    15661 ggcgatcaag gaagacaaga ttttcccggt gctgtttgcc tctgggctgg gaaatatcgg
    15721 caccgaccat ctgatggatt ttgtggtgga ttacttcccc accgcggctg agcatgcgac
    15781 ggtgacggca gcgccggaag cttccgacaa tggccacgct gctgaacgcc atgtgagcga
    15841 tagcgatccc acttcgctct atgtgttcag aactgcaaac gatccctttg ccggccgcat
    15901 tacctacttc aaggttttct cggggctggt caagaatgac gccaccctcc agaacttcac
    15961 ccgcggcacc acggaaaagc tcgcacatct ttccgtgccg cagggcaaaa atctgctgcc
    16021 cgtgccggaa ctgcatgccg gcgacatagg agcggtggct aaactgaaag ataccgtcac
    16081 gggcgacacg ctgggcgaca aggccaaccc cattcaatat ccggcggtgg ttctgccgga
    16141 accggccatc accttcgcca tcgaacccaa gagccgcaac gacgaagaca aactctccaa
    16201 tggcctgcac aagctgatgg aagaagatcc catggtccgc ttctttcgcg acgagcagac
    16261 gaaagagttc ctcatcgccg gaaccggcca gcagcatatt gaagtgatcg tctccaagct
    16321 gaagaagcgc taccacaccg aagtaaacct gaaagcgccg aaggttccat atcgcgagac
    16381 catccgcgga cgcgccgatg ttcagggccg gcacaagaag cagtccggcg gtcacggcca
    16441 gtacggtgat tgcaaaatca agatggaacc catggagcgt ggcaagggct tcgaattcgt
    16501 gaatgacatt ttcggcggcg ccatccccaa gaactatatc ccggccgtgg aaaaaggaat
    16561 tgtggaagca gcgcagcggg gatatctggc aggcttcccg gtggttgact tcaaagtgat
    16621 tctttacgac ggcagctatc acgacgtgga ttcgaacgaa ctctcattca agaccgcagg
    16681 ccggatcgcc ttcaaaaaag ccatggaaca ggccaagccc acgctacttg agccgatcat
    16741 gaaggtggag atcaccatcc ctgatgaatt cgccggtagt atcatgggcg atctcaactc
    16801 gcgtcgcggg cgcattcagg gcatggacaa caaggccggc aagactgtgg tcaaggccga
    16861 agtcccaatg gcggaaatgc tcacctacgg cgccgacctc acttccatga cgcagggccg
    16921 cggcagcttc aacatggaga tgtctcacta tgactttgtc ccggcggtga gccaggaaaa
    16981 gatcgtggcg cagtttaaag cggagcgcgg agagctggtg gaggtggaag agtaggaatg
    17041 ttttatcccg agcggacgcg agggaaccct atcccgataa agcttgttgt gggagtcgta
    17101 atactggctg cgatccaggt tggcggccag tcgcaatcga aggcgactcc catttcttcg
    17161 caaacaagtt tgtcgccgaa tgcgctgtat gaccttcctg gcccatttac tccaatcgca
    17221 accatttctg agttgcccca gccagtaaag gcagccctgg ccatggcttt ccgacaaaac
    17281 acattgcaaa tcgcagatcc cggtaagcca ttcaatgcta ccgacgtcgt cgatgaacgt
    17341 cttcccatgc ggcgcctgat ctttgcagga caagcagggg aaagatttgt ggtgcattac
    17401 gagcgaggtg gccgcggtca cagttactac gctctagtgt ttgacgttaa ggaccacaat
    17461 agcgcagctc tgattggggc cgcgtcatat cggcaagctg cgcgcaatat cgctaagcta
    17521 aagagtttac ggcacaacga catctcaaat tcccgaagtt tctgaatgat ctttatggag
    17581 ttatcgcttc gctcggctat tctgaaatcc cgaacgaagt gagtgatatc tatcggtcgc
    17641 gcggcgctca agggacagct gcatggacat tgatcac
//
LOCUS       DASQYP010000237         2408 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_184890, whole genome shotgun sequence.
ACCESSION   DASQYP010000237 DASQYP010000000
VERSION     DASQYP010000237.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 2408)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2408)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2408
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_184890"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1322)
                     /locus_tag="VE783_07725"
     CDS             complement(<1..1322)
                     /locus_tag="VE783_07725"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53326.1"
                     /translation="MKKPALIFSAVLIFILSLAATAQNAPAASPQASPAPQASPVPQP
                     PNPPQPGAKPQASPRPTPNVQVEIEEMPQQDHKLTPEEAKDLLASVDEVLQFVSEDTL
                     LPIKHSVKKQIVSRAQVEKYISGKFEDDADRIRFERSELVLKKFGFLPRTFDLHAFLI
                     KLLTEQVAGYYDEKTKTMNLLDWVAPDMQKAVMAHELTHALQDQSYDLEKMTKHEEEI
                     EKKGLTDLKALLKNDEQSTCRSAVLEGQGMIVLVDYMLSPAGKSVADSPGIVDMMISS
                     MEKDKSSPVYESAPLILQEELIFPYRQGMNFIKELVLKGGKKMAFTSVLNRMPETTRE
                     VMEPREYLAGRRIDPLFLPNFDFLKSDYEGYDAGAVGELDVDILLKVYAEDAVSKRLS
                     PLWRGGSYYAAGRKGAKPSDKNSTTHVGLYYASKWANEDAAREFAKIYA"
     gene            complement(1508..>2408)
                     /locus_tag="VE783_07730"
     CDS             complement(1508..>2408)
                     /locus_tag="VE783_07730"
                     /inference="COORDINATES: protein motif:HMM:NF017541.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="TROVE domain-containing protein"
                     /protein_id="HYX53327.1"
                     /translation="LAAAFTRFDEYALAKYNRPAPVKLRDVLFLCHAKPLDEAQAALW
                     KRLVEGELATPDTWEVALSAGADKREAWERLLGENKFGALALLRNLRNMAEAKVDEKL
                     IAGALGRMKTERVLPFRFIAAARYAPQWETELEQAMFRSLEEAAKLPGRTVLLVDVSG
                     SMDAQLSRRSEMRRNDAAYGLAVLLREIAEEVSIYSCSDELVRVPARRGFALSDAINA
                     SQRHNGTYMGKALAGLEEQYDRLIVITDEQSHDPVPSPKARGYMLNVASYQNGVGYGA
                     WMHVDGWSDSVIEYIRAAEPVLG"
BASE COUNT          482 a          741 c          659 g          526 t
ORIGIN      
        1 gcatatattt tcgcgaactc acgcgctgca tcttcattcg cccacttgga ggcgtaataa
       61 aggccgacat gcgttgttga attcttgtct gagggcttgg cgcccttgcg cccggcggcg
      121 taatacgatc cgccgcgcca caatggacta agccgcttcg acacggcgtc ttcggcataa
      181 accttcaaaa gaatatctac gtccagctca cccaccgcgc ccgcgtcgta gccttcgtaa
      241 tcgctcttaa ggaaatcaaa gttgggaaga aacaacggat caatgcgccg gcctgcaaga
      301 tattctctgg gctccatcac ttcgcgagtg gtctccggca tgcggttcag cacactggta
      361 aaggccatct tcttcccgcc cttgagaacc agttccttga tgaagttcat tccctggcgg
      421 taaggaaaga tgagttcttc ctgaaggatg agcggggcac tttcatacac cgggctgctc
      481 ttgtccttct ccatggaaga gatcatcatg tcgacgatgc cgggcgaatc ggcgacactc
      541 ttgcccgcag gcgataacat gtaatccacc agcacaatca tgccctgccc ttccagcaca
      601 gcgctgcggc aggtggactg ttcgtcattt ttgagcagcg ccttcagatc cgtgagcccc
      661 ttcttctcga tctcctcttc gtgcttggtc atcttctcca agtcataact ctggtcctgg
      721 agcgcgtggg taagctcgtg cgccatcaca gctttctgca tgtccggagc tacccagtcc
      781 agcaggttca tggtcttggt tttttcgtcg tagtagccgg ccacctgctc ggtcagcaac
      841 ttgataagga aggcatgaag atcaaaggtg cgcggcaaga atccgaattt tttcaggacc
      901 agttccgaac gttcaaagcg aatacggtcc gcgtcatcct caaacttacc tgagatgtat
      961 ttttccacct gtgcccggct cacgatttgc ttcttcacgg agtgcttgat cggcaggagc
     1021 gtgtcttcac tcacgaactg aagcacttca tccacggatg ccagcagatc cttcgcctct
     1081 tccggcgtaa gcttgtggtc ctgctgtggc atctcttcga tttcaacctg cacattcggc
     1141 gtggggcgag gcgacgcttg cggttttgcg cccggctgcg gaggattggg aggctgcggc
     1201 accggggagg cttgcggcgc aggcgacgct tgcggtgacg ctgcaggcgc attctgcgcc
     1261 gtggccgcca gagacagaat gaagatcaga actgctgaga agatcaaggc tggctttttc
     1321 atcagggaac tttgagtcgc tttcctcgag ccgagcagag ttgcttgtca gattgtacgc
     1381 tctcgggctg atgtattgga tggaggaaac acccggaaag taagctgaag aattgtgatg
     1441 agagcttcgc cgccgatgaa agcgcttaac tccatcttta caactcgcct tcagcggcgg
     1501 cggttaatca tcccaacacg ggttcggcgg cacggatgta ctcgatgacc gaatcgctcc
     1561 agccatctac gtgcatccac gctccgtagc cgacaccgtt ctggtagctg gccacattca
     1621 gcatgtagcc acgcgccttt gggctcggca ccggatcgtg cgactgctcg tcagtaatta
     1681 cgatcaaccg gtcgtactgc tcctccagac ctgcaagcgc cttacccatg tacgttccgt
     1741 tgtggcgctg gctcgcgtta atggcgtcgc tcaaggcgaa accgcgccgc gccggcacac
     1801 gcaccaactc gtcagagcag ctgtagatgc ttacttcttc ggcaatctcg cgcagcaaca
     1861 ccgcaagccc gtaggctgcg tcattgcgac gcatctccga acggcgagag agctgcgcat
     1921 ccatagagcc cgagacgtcc acaagcagaa ccgtgcgtcc cggcagcttt gctgcttcct
     1981 caagagagcg gaacatcgcc tgctcaagtt cagtctccca ctgcggcgca taacgagctg
     2041 cagcgatgaa ccggaacggc agcacgcgct cggtcttcat gcggcccagc gctccggcga
     2101 tcagcttctc gtccaccttg gcctcagcca tgttacgcag gttacgcagc agagccagcg
     2161 cgccaaactt gttttcgccg agcaggcgct cccaggcctc gcgcttgtcc gccccggcag
     2221 agagcgccac ctcccaggta tcaggcgtgg ccagctcgcc ctcgaccaga cgcttccaca
     2281 gcgcggcctg cgcctcgtcc agcggcttgg cgtgacacag gaaaagcacg tcacgcagct
     2341 tcaccggcgc gggacggttg tacttggcca gcgcgtactc gtcgaaacga gtgaacgcgg
     2401 cagccagc
//
LOCUS       DASQYP010000238         8481 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_265619, whole genome shotgun sequence.
ACCESSION   DASQYP010000238 DASQYP010000000
VERSION     DASQYP010000238.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 8481)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8481)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8481
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_265619"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1035
                     /locus_tag="VE783_07735"
     CDS             <1..1035
                     /locus_tag="VE783_07735"
                     /inference="COORDINATES: protein motif:HMM:NF021606.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2339 domain-containing protein"
                     /protein_id="HYX53328.1"
                     /translation="YTSPQRQVTVLFTLVFGAIFAAVPLVTPLTPSRWHTGASVTLTL
                     LPLVNAAAVFLALFSMYEREHETLTWYALGLGAAYLLLSSRFKRRVGSDPGTVKLVNM
                     LHVAIAIAFITIAIPLKLDEHWITIGWLIESAVLLYVSIKTKTDFLRWFAGATLALGV
                     LRLLAIDNFHVDTLVFNARFATYLVAIAILAGIVWAGDRYASEAELPVVRVAAVILNL
                     LALRALTLEAGGYFDRQATPIYTRNTTQYQLNQQLAFARDLSYSVIWLVYGAGLMLFG
                     FWKQSAFVRWQALVLIAVTIGKVFIYDTWNLDQGYRVLSFIALGVVLMGVSYVYHRDW
                     LRLSRRAGTA"
     gene            1077..1592
                     /locus_tag="VE783_07740"
     CDS             1077..1592
                     /locus_tag="VE783_07740"
                     /inference="COORDINATES: protein motif:HMM:NF017015.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DinB family protein"
                     /protein_id="HYX53329.1"
                     /translation="MSDKSGRSMLDAVMDSWDRSNRILVNLLRVIPPGNLETRAMEDS
                     PSIAEIFGHIHYVRLVFVSEDAPEFAQNIPAKEWAGEADPSRMAELLNESARGVGEAV
                     LARVKSGREMDIHYDHPILLLQHMLWHEGYHHGQIKLALKLAGHPIPNDDAGPLTWRV
                     WMNKSARPQEP"
     gene            1596..2819
                     /locus_tag="VE783_07745"
     CDS             1596..2819
                     /locus_tag="VE783_07745"
                     /inference="COORDINATES: protein motif:HMM:NF024562.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3999 family protein"
                     /protein_id="HYX53330.1"
                     /translation="MKKRIAQFGFILSILLSAAMATSLAYLKYDRPVQPGVAGQNYIA
                     MDEVIWKHARPDLGDLRLYSGDVETPYALLVERGSSEHELRQLRVLQQASVGGKTQFL
                     LDMQGVTEYDHVELRLASRNFIAHARVEGEDDPHGANWALLSDNIIYEFSKENLGGSS
                     MLRLPRATFRYLRVTIDGPVKPDEVQGASSEMREEAQPVWRQVNSTPEQKQDGKDTVF
                     TFAVPEHVPVEKVVFAVDPEQPNFRRQVEILNDQKQHIGSGEISRIHLVRFGNKVDSE
                     NFEVAFSAPGEKKLSVVIHNGDDAPLRLQSARLEQQERRLYFEAAATNPLTLYYGDEK
                     LAAPVYDYAKLFQREKTAAAATLGAEQENRAYTGRPDERPWTERHPVLLWIAIIVAVL
                     VLGAVALRSMKTATA"
     gene            complement(2816..3178)
                     /locus_tag="VE783_07750"
     CDS             complement(2816..3178)
                     /locus_tag="VE783_07750"
                     /inference="COORDINATES: protein motif:HMM:NF018894.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0035438 - cyclic-di-GMP binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PilZ domain-containing protein"
                     /protein_id="HYX53331.1"
                     /translation="MAVQYQERRRYPRYACDTGVRVHPEKGSGGYWGTLSDISQGGCY
                     VYTFSPLPVGQMVTLVMKIDGAELNVGGKIVSSHPGVGMGIAFAGFIHEDGEVRLKTF
                     LEKLSLQPKMKESTPVFH"
     gene            complement(3518..3856)
                     /locus_tag="VE783_07755"
     CDS             complement(3518..3856)
                     /locus_tag="VE783_07755"
                     /inference="COORDINATES: protein motif:HMM:NF018894.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0035438 - cyclic-di-GMP binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PilZ domain-containing protein"
                     /protein_id="HYX53332.1"
                     /translation="MAFTERRKHPRHACGLAVEVQPAGETSTLSGYLADICLGGCYIS
                     TMSPLPPGIPVVVSFGSNGERAAITGKTITSMPGSGMGIEFTNPAKEITRRIQDLIEQ
                     INHEDANLAI"
     gene            complement(4410..6833)
                     /locus_tag="VE783_07760"
     CDS             complement(4410..6833)
                     /locus_tag="VE783_07760"
                     /inference="COORDINATES: protein motif:HMM:NF013727.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0015616 - DNA translocase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA translocase FtsK"
                     /protein_id="HYX53333.1"
                     /translation="MTFLSRVVTPTRNRRLNELAGFLLLASAVLLFLALVSYSPSDPS
                     FNTSVSLSSRGAGNWIGLFGAYLSDLMIQSVGICVFLLPVVIALFGARWFRSREIPSA
                     GAKALGVAILLIFSPALVALLPFHLRWRHAVPIEGLLGRILGDVLLHYFNVIGAYIVS
                     ATIVAVALYLCTAFSFSAAHVWAETRFAFAFALGQRFQDWRAERARKKAAKVAQKAQQ
                     QKENDRRIAADRRVPQAAQPVRPSPVQAQSAQSQTERTFGEEPVAQKQPITVPAAPLP
                     ALLAAEATAEPEPPIASRGDAERKAKTILPKIAAGGYKLPPSSLLHRADDQQVINESE
                     LKDLAQVLTEKCAEFDVLGTVTQINPGPVVTTYEFKPEAGVKYSRVTSLSEDLCLAMR
                     AESILIERMAGKSTVGIQVPNHERETIWLREVIEAQEFTTPKSRITLAMGKDINGRIV
                     TADLASMPHLLIAGSTGSGKSVAINAMIMSILYKSTPEQVRLILVDPKRLELGIYEGV
                     PHLYVPIITEPKLAANALRNAVREMERRLKVLAEKGVRNIDQYNKLFEKETPGLFDTP
                     SEHDHRPLPYIVIIIDELADLMMLDQSNVEESITRLAQMARAVGIHLVLATQRPSVDV
                     ITGLIKANFPSRISFRVATKIDSRTILDANGAESLLGKGDMLYLPSGSARVHRVHAPF
                     TTEKEINAVVEFWRSQGAAQYEQKFLEAPKDEKEKPGVAGSAGADDSGDDENDELYQD
                     AVRLVIEFGKASTSLLQRRLRIGYGRAAHLIDLMEKDGIVGAADGPKPREVLKRRLAE
                     RSGRGAALS"
     gene            7097..>8481
                     /locus_tag="VE783_07765"
     CDS             7097..>8481
                     /locus_tag="VE783_07765"
                     /inference="COORDINATES: protein motif:HMM:NF013592.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008237 - metallopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M1 family aminopeptidase"
                     /protein_id="HYX53334.1"
                     /translation="MHIARRPLRRACLLVAILCSMALPALAQKARIRAEDYQIDAEIV
                     PKTHRLTAKARVKFTALEDLNFASFELNNALHVTKILDEKGKSLTAERVTQDNAVRVT
                     FPAALPKGTSTSLTFEYEGALATADDSPVEGLKLAYIDEDVTYLLYPGCWFPVSNYGM
                     DRFTAAINITAPTGTVVVGSGRIKSEKPAPAGKIVASFNYPKPSFPGTIIAGPFVENT
                     YGGGNTHVFFHDAKKNLAPAYGDTAIKEMEFFTSIYGPAPTPILNVVELPDDTVPTWW
                     APEITAIATRDVSDKTNYRLLADSIAHQWWGGVVSPATKDEWWIMDGGARASEMRYVQ
                     NAAGATAFEDATRDMAVGALAYDTTPLASVGKMDVFSPQFQALVTDKGGMIFHMLRWV
                     LGDAAFDKTMKEFMAKFAFKSVTMDDLQAVAEQNSNGEKLAPFFTQWVNGTGAPEFKM
                     KYTVYRVKKGFR"
BASE COUNT         1859 a         2282 c         2557 g         1783 t
ORIGIN      
        1 tatacgagtc ctcagcggca ggtcacggtt ttgtttactc tggtcttcgg cgccatattt
       61 gcggccgttc cgctcgtcac cccgctgact ccatcgcgct ggcacaccgg agccagcgtt
      121 acgcttacgc ttctgccgct cgtcaacgcc gcagcggtct ttcttgcgct gttctcgatg
      181 tatgagcgcg agcacgaaac ccttacgtgg tacgcgctgg gattgggcgc cgcttacctg
      241 ttgctgagca gccggttcaa gcgccgggta ggcagcgatc cgggaaccgt gaagctggtc
      301 aacatgctgc atgtggcgat tgcgattgcc ttcattacca tcgcgattcc gctcaagctg
      361 gacgagcatt ggatcacgat tggctggctg atcgaatcgg cggtgctgct ctatgtctcg
      421 ataaaaacga aaacagactt cctgcgctgg tttgccggag ccacactggc gctgggcgta
      481 ctccgcctgc tggcgattga taacttccac gtggacacgc tggtcttcaa tgcgcggttt
      541 gcgacctatc tggttgcaat cgcaattctg gcaggtatcg tctgggcggg cgatcgttat
      601 gcgagcgaag cagaactgcc ggtcgtacgg gttgcggctg tgatcctgaa cctgcttgcc
      661 ctgcgcgctc tcacgctcga ggccggcgga tattttgacc ggcaggcgac tcccatatat
      721 acgcgaaata cgacgcagta ccagctgaac cagcagttgg ccttcgcgcg agacctgagc
      781 tattcagtca tatggctcgt ttatggtgca gggctgatgc tgtttggctt ttggaaacaa
      841 tcggcatttg tgcgctggca ggcactggtg ctgatcgcag tgactattgg caaggtgttc
      901 atctatgaca cgtggaacct ggaccagggt taccgcgtcc tgagtttcat tgctctcgga
      961 gtggtgctga tgggggtttc ctatgtttac catcgcgact ggctgagact gtcgcgacgg
     1021 gccgggactg cgtaattttc gtccgtcaaa gtttgcggaa cagtctggaa ccttgtatgt
     1081 cagataaatc gggaaggagc atgcttgacg ctgtgatgga ttcgtgggac cggagcaaca
     1141 gaatcctggt taacctgctt cgtgttattc ctccaggcaa tctcgagacc agggctatgg
     1201 aggacagccc atcaatcgcc gagattttcg ggcacattca ttatgtgcgt ctggtctttg
     1261 tgtcagaaga tgcgccggaa tttgctcaaa acattccggc gaaggagtgg gcaggggaag
     1321 ctgatccgag ccgcatggca gaactgctga atgaaagtgc tagaggggtg ggagaagctg
     1381 ttttagccag agtgaagtct ggccgtgaaa tggatattca ctacgatcat ccgattctgc
     1441 tgctccagca catgctgtgg catgaaggct atcatcacgg gcagatcaag ctggcgctca
     1501 aattggcagg ccatccgatt cccaatgacg atgcaggccc actcacttgg cgcgtgtgga
     1561 tgaacaagag cgcgcgtccg caggaaccct gaaccatgaa gaaacgaatc gctcaattcg
     1621 gattcatcct gagcatattg ctgagcgcgg ccatggccac gtcactcgcg tacctgaaat
     1681 atgaccggcc cgtgcaaccg ggcgtggcgg ggcaaaacta catcgctatg gatgaggtga
     1741 tctggaagca cgcgcggcct gacctgggcg acctgcggct gtattccggc gatgtcgaaa
     1801 ccccgtacgc attattggtg gagaggggaa gcagcgaaca cgagcttcgg caattacgtg
     1861 tgctgcagca ggcgagcgtc ggagggaaga cccagttcct gttggacatg caaggcgtga
     1921 ccgaatatga ccacgttgaa ttaaggcttg caagcaggaa cttcatcgct cacgcacggg
     1981 tggaggggga ggatgatcct cacggagcaa actgggcgct tctcagtgac aacattattt
     2041 atgagttctc caaagagaac ctgggcggca gcagcatgct gcgcttgccg cgtgccacgt
     2101 tccgctacct gcgagtaaca attgacgggc ccgtcaagcc cgatgaagtg cagggtgcga
     2161 gttcggaaat gcgcgaggag gcgcaaccgg tgtggcgcca ggtcaacagc actccagagc
     2221 agaaacagga cggaaaagac acggtattca ccttcgctgt tccggaacac gttccggtgg
     2281 agaaggtggt gtttgcagtg gatccggagc agccgaactt ccggcgccag gtggagatcc
     2341 tgaacgatca gaagcagcac atcggctcgg gtgagatcag ccgcattcat ctggtgcgtt
     2401 tcgggaacaa ggttgattca gagaatttcg aggttgcgtt ctcggcgccg ggtgagaaga
     2461 agctttctgt ggtgattcac aacggcgacg atgcgccgct ccggctgcag tcagcgcgac
     2521 tggagcagca ggagaggcgg ttgtacttcg aggccgccgc gaccaacccg ctcactctct
     2581 attacggcga tgaaaagctg gcggctccag tttacgacta tgccaagctg ttccagcgag
     2641 agaagacggc tgccgccgcc acgctgggag cggaacagga aaacagagct tacacaggca
     2701 ggcccgacga gcgtccatgg acggagcgcc acccggtgct actgtggatt gcgatcatcg
     2761 tggcagtgct ggtgctaggc gctgtggcgc tgagatccat gaagacggcc acggcttaat
     2821 ggaacaccgg cgttgattct ttcatcttgg gttgtagcga gagtttttcc agaaacgtct
     2881 tcagccttac ttcgccgtcc tcgtgaatga acccggcaaa ggcgatgccc atgccaacgc
     2941 ccggatggga gctgacgatt tttccgccta cattcagctc tgcaccgtcg attttcatca
     3001 ccagcgtgac catctgaccc accggaagag gcgagaaagt gtacacataa cagccgccct
     3061 gcgagatgtc agacaaagtg ccccaatagc cgccgctgcc cttttcggga tgaacgcgga
     3121 cgccggtatc gcatgcataa cgcggatacc tgcggcgctc ctgatactga actgccattg
     3181 ccatactcct taagagtatt gttccaccac caggttatgg cgagcgcatt acgaaggaac
     3241 agcaggtaca acgtccgttg cggacatgtc caagtggagc aggaaaacaa caaaacctta
     3301 ccgctgatga cgctgatttt taactgatgg ggcaggattg gactgtgaga taaacggcaa
     3361 acgcgcagga gcttgcactc caccttccag aagccagcat tgttttaacg gcctttccgg
     3421 accaagcatg aaaaggcatt cagatctggg tctaaagcgt tccctcgctg tgctcgggat
     3481 acaaaacagc gctttcggtc aggacaggga agaaggttta gatcgccaga ttcgcgtctt
     3541 cgtggttaat ctgctcgatc aagtcctgaa tgcggcgcgt gatttctttt gcggggttcg
     3601 tgaactcgat acccatgccg ctcccgggca ttgaggtgat cgttttcccg gtgatcgcgg
     3661 ctcgttcccc gttcgaccca aaagaaacga ccacgggaat tcctggcggg agcggcgaca
     3721 tggtggaaat atagcaaccg ccgaggcaga tgtcggcgag atagccggac aacgtggagg
     3781 tttctcccgc aggttgaact tcaaccgcca gaccgcaggc gtgacgtgga tgcttgcgcc
     3841 gctcagtgaa ggccatcaga caacctccga ccgaacatag tcgggcaact ctggattttg
     3901 cgcaagatcg ttactacaaa gctaactaca gagggcaaga aggtgcacga aggtaaaacc
     3961 ggcagtttgc tcctcggatc tatcccataa accagttcac caggctgaaa atggttcggg
     4021 ctgttgatgc ctggccggct tctctcttgc gaatcaaatg ttagttttgt cagacgtgta
     4081 gcacaggcgc cccgcctgtg ccgcaagaat gacaatctac ggccgcattg ccgcatattg
     4141 ccccaaaagg gagtcgtact tcatcgcatt cttgcaagag acgatctgac cctgaatatg
     4201 aggcgcagtg gttggtccct ggccattgtt tgagcgaccc cggcaatcgc acgagatgga
     4261 gtcggttgtg gtattgcgac gtggaacgag aaagtgtaaa cggaggtaga agatcaaaga
     4321 tccgtggctg agcgggcagt aatcggcaca ggcgaggcgc ctgtgctaca gagccgttac
     4381 ggcgttaagt cattgatcag aggtactagt cagcttagcg cagcgcctct tccacttcgc
     4441 tcagccagtc tgcgcttcag cacctcgcgt ggcttaggcc cgtcagcggc gcccacaata
     4501 ccgtcctttt ccatcaggtc gatcagatgc gctgcacggc cgtagccgat gcggagccgg
     4561 cgttgcagca gggaagtgga ggccttccca aattcgatca ccagccgtac ggcgtcctga
     4621 taaagctcgt cgttttcatc gtcgccagaa tcgtcggccc cagcagaccc ggcaacgccg
     4681 ggcttctctt tttcgtcttt tggagcttcc aggaatttct gctcgtactg cgctgcgccc
     4741 tgggagcgcc agaactcgac cacggcattg atctcttttt ccgtggtgaa gggcgcatgc
     4801 acgcggtgaa cgcgagcgga gccggagggc agataaagca tgtcgccctt gccgagcaga
     4861 gattctgcgc cgttggcgtc gagaatggtg cgcgagtcga tcttcgtggc gacgcgaaac
     4921 gagatgcgcg acggaaaatt agccttgatc aggccggtga tcacgtccac cgacgggcgc
     4981 tgggtcgcca gcaccaggtg gatgccgacc gcgcgggcca tctgtgccag acgcgtaatc
     5041 gattcttcca cgttggactg gtccagcatc atcaggtcag ccaactcgtc gatgatgatc
     5101 acgatgtacg gcagtggccg gtgatcatgc tcagaaggcg tatcaaagag gccgggtgtc
     5161 tccttctcga acaacttgtt gtactggtcg atattgcgga cgcctttttc cgccagcacc
     5221 ttgaggcggc gttccatctc gcggacggca ttacgcaggg cgttggccgc aagcttgggc
     5281 tcggtgatga tgggaacgta gagatggggc acgccttcat aaatgccgag ttcaagccgt
     5341 ttgggatcca ccaggatcag ccgcacctgt tccggtgtgg acttatacag gatggacatg
     5401 atcatggcgt tgatggccac gcttttgccc gatccggttg agcctgcgat cagcaggtga
     5461 ggcatgctgg ccaggtcggc tgttacgatg cggccgttaa tgtccttgcc catggccaaa
     5521 gtaatccgcg actttggtgt cgtgaactcc tgggcctcaa tcacctcgcg cagccagatg
     5581 gtctcgcgtt cgtggttcgg aacctgaatg cccaccgtag acttgccggc catgcgctca
     5641 atcaggatgc tctccgcgcg catcgcgagg cagagatctt cagagaggct ggtaacgcgg
     5701 ctgtacttca cgccagcttc gggcttgaac tcgtaagttg tgaccacggg gccgggattg
     5761 atctgcgtaa ccgtgccgag cacgtcgaat tcagcgcact tttctgtgag cacctgcgcc
     5821 aaatccttca actcagactc gttgatgacc tgctgatcgt ctgcgcggtg gagtagggaa
     5881 ctgggcggca gcttgtatcc gcccgctgcg attttcggca ggatggtctt tgccttgcgc
     5941 tccgcgtcac cgcgtgaggc gattggaggc tcaggttcgg cggtagcttc agccgcaagc
     6001 agcgcaggca acggcgcggc gggaacagtt atcggctgtt tctgtgcgac cggttcctct
     6061 ccgaaagtac gctctgtttg agattgtgca gattgggctt gaacaggtga tggccttacc
     6121 ggctgagcag cttgcggaac acgtcgatcg gcagcaatcc ggcggtcatt ctccttctgc
     6181 tgttgggctt tctgggccac cttggcggct tttttgcgag cccgttcagc gcgccaatcc
     6241 tggaatcgct ggccgagtgc aaaggcaaag gcgaagcggg tttccgccca cacgtgcgcg
     6301 gcgctgaagg agaacgcagt gcacagataa agagccacag caacgatcgt cgccgaaaca
     6361 atgtaggcgc cgatcacgtt gaagtagtgc agaagtacgt cgccaagaat gcggccaagc
     6421 agtccttcaa tcggaaccgc atgacgccag cgcaggtgga acgggagcag cgcaaccagc
     6481 gcgggcgaga aaatgagcag gatggccaca cccagggcct tggcgccggc tgaagggatt
     6541 tcgcgggagc ggaaccatcg tgctccgaaa agtgcaatca ccaccggcag caaaaaaaca
     6601 cagatgccga cactctggat cattaagtcg ctcaggtacg cgccgaagag gccgatccag
     6661 tttccagctc cgcgcgaaga aagcgatacc gaggtattga acgaggggtc ggaaggtgaa
     6721 tagctaacca gggcgaggaa aaggaggacc gcggaggcaa gcagaagaaa ccctgccagc
     6781 tcattcaggc ggcggttgcg cgtaggggtt acaacacgcg agagaaacgt cattgaggtg
     6841 ttccgccctt cagcaagaga cacatatcca ctttactgaa gtgagagtaa caccagagcc
     6901 agaacattat ctcagaactt ggccgaaaaa gctgcctttt gctgtacttc aggactacgg
     6961 atggtacaca gttacggggc ctaaggaaca atggcggagc tggtgttggg acaaggcggg
     7021 ttaagtggca ggagagcagc ttttctgtaa gaattagcat caaagctgat tatcgccagc
     7081 agctctggag agttacatgc atattgcacg acggcccctg cgacgtgcct gccttcttgt
     7141 tgccattttg tgttccatgg cgctgcccgc gctcgcgcag aaggctcgta tcagggccga
     7201 agattatcag atcgatgccg agatcgttcc caagacgcat cgccttacgg cgaaggcgcg
     7261 ggtcaagttc acggcgctgg aagatctcaa cttcgcgagc ttcgagctca acaatgcgct
     7321 gcatgttacg aaaatcctgg atgaaaaagg caagtcgctg acggccgaac gcgtgaccca
     7381 ggacaacgcg gttcgtgtca cttttccggc agccctcccg aagggcacga gcacaagcct
     7441 gacattcgaa tacgaaggcg ctctagccac ggctgacgat agtcccgtgg aagggctgaa
     7501 gctggcttat atcgacgaag atgttaccta cctgctgtat ccgggatgct ggttcccggt
     7561 aagcaactac ggaatggatc ggtttacggc ggctatcaac attaccgcgc caaccggcac
     7621 agttgtcgtg gggagtggca ggatcaaatc agaaaagccg gcgcctgccg gcaagatagt
     7681 cgcgagcttc aactatccca agccgagctt tccaggcacc atcatcgcgg ggccctttgt
     7741 cgagaatacc tatggcggtg gcaacaccca tgtcttcttt catgatgcca agaagaacct
     7801 ggctcccgct tacggcgata ccgcgatcaa ggagatggag ttctttacaa gcatctatgg
     7861 acctgcgccc actccgatac tgaacgtggt tgagctgccg gatgacacgg tgccaacttg
     7921 gtgggcgccg gagatcaccg cgatcgctac tcgcgatgtg agtgataaga caaactaccg
     7981 gctgctggcc gattccattg cacatcagtg gtggggagga gttgtaagcc ctgcgaccaa
     8041 agatgaatgg tggatcatgg acggtggggc acgcgcctct gagatgcgtt acgtccaaaa
     8101 cgccgccggc gcaaccgcct ttgaggacgc cacgcgtgat atggctgtgg gcgcgctggc
     8161 gtacgatacg acaccgctgg ccagcgttgg caagatggac gtgttttcac cgcagttcca
     8221 ggcgctggtg accgataagg gcggcatgat ctttcacatg ttgcgctggg tcctcggaga
     8281 tgcggctttc gataagacca tgaaggaatt catggccaag ttcgccttta aatcagtaac
     8341 catggacgac ctccaggcgg tcgccgagca gaacagcaat ggagaaaagc tggcgccttt
     8401 ctttacccaa tgggtgaacg gcaccggtgc acctgagttc aagatgaagt acacggtgta
     8461 tcgcgtgaag aagggctttc g
//
LOCUS       DASQYP010000239         3245 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_243235, whole genome shotgun sequence.
ACCESSION   DASQYP010000239 DASQYP010000000
VERSION     DASQYP010000239.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 3245)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3245)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3245
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_243235"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..443)
                     /locus_tag="VE783_07770"
     CDS             complement(<1..443)
                     /locus_tag="VE783_07770"
                     /inference="COORDINATES: protein motif:HMM:NF018404.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0046983 - protein dimerization activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ClpX C4-type zinc finger protein"
                     /protein_id="HYX53335.1"
                     /translation="MKPRSPEETLRCSFCHKSQDAVAKLISSPSDYPRAYICDECVAV
                     CNSILEDDRSETHAAAAPNHLPKPQEVKTFLDEYVIGQEQTKKKLSVAVYNHYKRIHM
                     NRNKGNDVELSKSNILLIGPTGTGKTLLAQTLARMLDVPFAIVDAT"
     gene            complement(515..1102)
                     /gene="clpP"
                     /locus_tag="VE783_07775"
     CDS             complement(515..1102)
                     /gene="clpP"
                     /locus_tag="VE783_07775"
                     /EC_number="3.4.21.92"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016290037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009368 - endopeptidase Clp complex
                     [Evidence IEA];
                     GO_function: GO:0004176 - ATP-dependent peptidase activity
                     [Evidence IEA];
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp endopeptidase proteolytic
                     subunit ClpP"
                     /protein_id="HYX53336.1"
                     /translation="MALVPMVVEQTSRGERAYDIYSRLLRDNIIFIGTPIDDTIANLV
                     IAQLLFLEAEDPEKDIQLYINSPGGSITAGMAIYDTMQFVRPDVMTICCGQAASMAAT
                     LLCAGAAGKRFALPTSRILIHQPLMSGLSGQATDIDIHAREILRMREITNQMLAKHTG
                     QKLEKVEKDVERDFIMNAQQAKEYGIIDDIIYKHK"
     gene            complement(1126..2508)
                     /gene="tig"
                     /locus_tag="VE783_07780"
     CDS             complement(1126..2508)
                     /gene="tig"
                     /locus_tag="VE783_07780"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: protein motif:HMM:TIGR00115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005854 - nascent polypeptide-associated
                     complex [Evidence IEA];
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA];
                     GO_function: GO:0051082 - unfolded protein binding
                     [Evidence IEA];
                     GO_process: GO:0051083 - 'de novo' cotranslational protein
                     folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="trigger factor"
                     /protein_id="HYX53337.1"
                     /translation="MENENTENKAVEGAQALEQPGEGTATAVAEDPCRQQITVEIPAD
                     VVAEEQESIIQKYAKQARVPGFRQGKVPASVVRSRFAEQIKEQMLENLVPQYFRVAVM
                     SGGYKPISSPHISDLHADPGEAIRFTASFDVMPEFELGDYKSIKVEKPNIQVSDEEVE
                     HEIKHLQDQQASFDPVEEERALQNGDFAQVSFEATPKAPEADAGGEQKKAEQPVEPVR
                     MDDVMVEIGGPSTVAEFTENLRGAKGGEERSFEVVYPQEFHDARLAGKTFGYKVKINA
                     IKKKTLPELNDAFAKELSPEIETMEKLRETIKENLRNHRQHEAEHEAKEKLIDQLVSQ
                     HEFPVPSSMIEHQIDLRLERGLRALAAQGMRPEDMKRMDFRRLRLGQREGAIKEVKSG
                     MLLHKIADAENIQISDEELEQELLVLAQQTQQTPEDVKQQLSKDQGLDRIRSRMRGEK
                     ALNFLYSNLQ"
     gene            2752..3123
                     /locus_tag="VE783_07785"
     CDS             2752..3123
                     /locus_tag="VE783_07785"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53338.1"
                     /translation="MRPAVLSISRERVLAPIRNAVLAHAGYAVIPAHSVDSALAVLHK
                     RHVCAIVVGQSISDRECKRLCDEAHRLGVPSVILDPYEQFLREDTEVHINPLDGPELF
                     LDALANLVQRDHRSCVTARPC"
BASE COUNT          588 a          987 c          843 g          827 t
ORIGIN      
        1 gtggcgtcca cgattgcgaa cggcacatcc agcatgcgcg ccagcgtctg cgccagcaaa
       61 gtctttccgg ttccggtcgg gccaatgagc aggatgttgg acttggaaag ctccacgtcg
      121 ttgcccttgt tccggttcat gtgaatgcgc ttgtagtggt tatagaccgc gacggagagt
      181 tttttcttcg tctgctcctg gccgatcacg tattcgtcca ggaatgtctt tacctcctgc
      241 ggcttgggca ggtggttagg cgctgctgcg gcatgcgtct cagagcggtc atcttccaga
      301 atggagttac agaccgcgac gcactcgtcg cagatgtagg ccctgggata gtcgctcggg
      361 gaggatatca gtttggccac cgcgtcctga gacttgtggc agaaagaaca acgcagggtc
      421 tcttccggcg atctcggctt cacttgtaac tccttggttc cagaccctta tttcccttgg
      481 ccagcgggtc tcggaccaca catctttacc gccactactt atgtttgtag atgatgtcat
      541 caataatgcc atattctttg gcttgctggg cattcatgat gaaatctctt tctacgtcct
      601 tctctacctt ttccagcttc tggccggtgt gcttggccag catctggttg gtaatctccc
      661 tcatgcgaag gatctctcta gcatgtatat caatatccgt ggcctggccg ctaaggcctg
      721 acatcaaggg ttggtgaata agaatcctag aagtcggtaa ggcaaaacgc ttaccggccg
      781 cgcccgcgca caaaagtgtt gcggccatgc tggccgcctg gccacagcaa atagtcatca
      841 catccggccg tacaaactgc atggtgtcat agatcgccat gcctgccgtg atcgaaccgc
      901 ccggcgaatt gatgtagagc tggatgtcct tttccggatc ctcggcctcc aggaacagca
      961 actgggcaat taccaggttc gcgatggtgt catcgatggg ggttccaatg aaaatgatat
     1021 tgtcgcgcag caggcgggag taaatgtcgt aagcgcgttc gccgcggctc gtctgctcca
     1081 ccaccatagg tacgagtgcc ataaaatgcc cttcctccgg aagttctatt gcaagttgct
     1141 gtacagaaag tttaacgctt tttcgccgcg catgcgggag cggatgcgat cgagtccctg
     1201 gtctttgctc aactgttgtt tgacatcttc cggcgtctgt tgcgtttgct gcgccagaac
     1261 caaaagttcc tgctccagct cttcgtcgct gatctgaatg ttttcagcgt cagcgatctt
     1321 gtgcagcagc atccctgact tcacctcttt gatcgctcct tccctctggc ccagccgcag
     1381 gcggcggaaa tccatccgct tcatgtcctc gggccgcatt ccctgggccg ccagcgccct
     1441 taacccgcgc tccagccgca ggtcaatctg gtgctcaatc atcgaagatg gcaccgggaa
     1501 ctcgtgctgt gagacgagct ggtcaatcag cttctctttc gcctcgtgct ctgcctcgtg
     1561 ctgccgatgg ttgcgcaggt tctccttgat ggtctcccgc agcttctcca tcgtctcgat
     1621 ttccgggcta agctccttgg caaaagcatc gttcagctcc ggcagggtct tctttttgat
     1681 ggcattaatc ttcactttgt acccaaaggt ttttccagcc agccgcgcat cgtggaactc
     1741 ctgcggatac accacctcaa agctgcgctc ctcgccccct ttggcgccgc gcaggttctc
     1801 cgtgaactcc gccaccgtgc tgggaccacc gatctccacc atcacgtcgt ccatgcgcac
     1861 cggttcaacg ggctgctcgg ccttcttctg ctcgcctcca gcatctgctt cgggcgcttt
     1921 cggagtggct tcaaatgaga cttgggcaaa gtcgccgttc tggagcgctc gctcttcctc
     1981 caccggatca aagcttgcct gctggtcctg caggtgcttg atctcgtgct ccacctcttc
     2041 atcgctgact tgaatgttcg gcttctcaac cttgatgctc ttgtaatcgc cgagttcaaa
     2101 ctccggcatc acgtcaaagc tggccgtaaa gcgaatggcc tcgcccgggt ccgcatgcag
     2161 gtcactgatg tggggcgatg aaatcggctt atagccgccc gacatcaccg ccacccggaa
     2221 atattgcggc accaggtttt ccagcatctg ctccttgatc tgctcggcaa accggctcct
     2281 gaccacgctg gccggcacct tgccctggcg gaagcccggc acccgcgcct gcttggcata
     2341 cttctggata atggattcct gctcctcagc caccacgtcg gccggaattt ccaccgtaat
     2401 ctgttgacgg caagggtctt ccgccactgc ggttgccgtg ccttcgcccg gctgctccag
     2461 cgcttgtgcg ccttcaactg ctttgttttc ggtgttttcg ttttccaagg ctgttccttt
     2521 tattgaccgg aaggccgaaa atgcccaacc gcgagctctg atttctggcc gtaaaggccc
     2581 caaactccta agtttaagga gagattgggg gttggtcaaa cgccgccggt aaccccttaa
     2641 aacccttcat tttctttgac gtttttttac ttgctttcgt gctctggcga gccaatactc
     2701 tgttcaacgt agttccgggt acagcgtttt ttgtcgacgg ataaggattt tatgagacct
     2761 gcagtgcttt ccatctcccg ggaaagagta ttggcgccta tccgcaatgc cgtgcttgcc
     2821 catgccggat atgcagtgat cccagcccat tcggtcgatt ccgctctcgc cgtactgcac
     2881 aaacgacacg tctgcgcgat tgttgttgga caatccatca gcgatcgtga gtgtaagcgg
     2941 ctttgcgatg aagcacaccg gcttggagtc ccttcagtca tcctcgatcc ctacgagcag
     3001 ttcctgcgcg aggacactga agtgcacatc aacccgctcg atggtccgga gcttttcctg
     3061 gacgcgctcg ccaacctggt gcagcgcgac catcgctcat gtgtcaccgc gcggccttgc
     3121 taaactagcg gagaaatgtc ctctgccctc ctccgtatcc agcaggagat tgtctcctgc
     3181 aatcgctgtc cgcgcctgat tgaacactgc cagaagatcg ggcgcgagaa gcgccgcgcg
     3241 taccg
//
LOCUS       DASQYP010000240        14292 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_136893, whole genome shotgun sequence.
ACCESSION   DASQYP010000240 DASQYP010000000
VERSION     DASQYP010000240.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 14292)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14292)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14292
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_136893"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            102..812
                     /locus_tag="VE783_07790"
     CDS             102..812
                     /locus_tag="VE783_07790"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0035438 - cyclic-di-GMP binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PilZ domain-containing protein"
                     /protein_id="HYX53339.1"
                     /translation="MALQALLLSRDPEAQRTVRRVLDSANIELDVANSHDQARLALTR
                     RKYDTFLVDCDDMPHGPAVLKELRQGKSNRSCIVFAIVSTRTTVQQAFELGANFVLDK
                     PISIERATRSVRAAQGLILRERRRYHRHLVRATGAILVDSGSELPVSITNISCGGISI
                     ECSRRLDEGGAARVKFHLPGTRRALEVKGEVIWSTPEGKSGIRFQVLPVEVKKELDAW
                     LDRRALPLNGAMFINATM"
     gene            complement(813..1721)
                     /gene="lpxC"
                     /locus_tag="VE783_07795"
     CDS             complement(813..1721)
                     /gene="lpxC"
                     /locus_tag="VE783_07795"
                     /EC_number="3.5.1.108"
                     /inference="COORDINATES: protein motif:HMM:TIGR00325.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008759 - UDP-3-O-[3-hydroxymyristoyl]
                     N-acetylglucosamine deacetylase activity [Evidence IEA];
                     GO_process: GO:0009245 - lipid A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-3-O-acyl-N-acetylglucosamine deacetylase"
                     /protein_id="HYX53340.1"
                     /translation="MPFEQTVRMPVECRGVGLHSGAPVKLRILPAPAGTGIVFRRSDL
                     DGFEIEAIGRNVAKVSYATSLQKKGVLISTTEHLLSAFIGIGLDNAVVELDNLELPIL
                     DGSAKPFVDLVLQAGLRQQRRKRTYLRIKREIEVRDGNKFIAAYPAPGYAVSYHINFA
                     QPIGELSFEVDLSRDLYRREIAPARTFGFLREEQAMRNMGLIRGATEENVIVVTDSGV
                     KNGPLRFEDEFVRHKILDLIGDLALLGKQIIGRIVAERAGHAMHTALVSRLLKDRSLW
                     EETIELAQEEKAMPGLAIATPRLGEA"
     gene            complement(1802..2644)
                     /locus_tag="VE783_07800"
     CDS             complement(1802..2644)
                     /locus_tag="VE783_07800"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53341.1"
                     /translation="MRITFLLLLAVGAATAQQTVQPAPPSPNTGQEAQSNEQKARVWI
                     KQMIDALGGQAYLTLHDSYSEGRYGRFHNENMVGGAVFFRYWQWPDKERFEATKERDI
                     ASLVIEDKIWEITFRGGKELDPKKDATVRLGMVRRRFALEQILREWINQPGTLLLDEG
                     PTLADNKMTERITVINAQNEAASILIAPDTHLPVSKRFTVREPETRNDPNNTLDRDQE
                     EEIYGNWRLVQGINTPFTTVTLHNGQIARQQAITNIVYNQRPPDNYFTPVLIKHEPEK
                     EKKR"
     gene            complement(2694..3476)
                     /locus_tag="VE783_07805"
     CDS             complement(2694..3476)
                     /locus_tag="VE783_07805"
                     /EC_number="1.1.1.47"
                     /inference="COORDINATES: protein motif:HMM:NF005559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucose 1-dehydrogenase"
                     /protein_id="HYX53342.1"
                     /translation="MSSQGIALSLQGRVAVITGGSRGIGAACVKLFCRAGARVLFNYQ
                     RAAEAAHKLEAECGGAACVAAVSAELQSPEAARKLVNAAIERFGSVDILVGNHGVWPS
                     QDVAIDRMSDEQWRSTLAINVDSLFGLVKYGVAQMKNQGQGGHIVLISSTAGQRGEAF
                     HCDYAASKGAIISMVKGLSTELARERIYVNCVAPGWVETDMAAPALRDPATSHKIFNT
                     IPLGRVGTPEEIAGTVLFLCTPYAGFITGEIVNVNGGAVLVG"
     gene            complement(3546..3767)
                     /locus_tag="VE783_07810"
     CDS             complement(3546..3767)
                     /locus_tag="VE783_07810"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53343.1"
                     /translation="MTGVYAVTHYQHRMPHEVFAKEGELFPVCRRCTSRVSFTLIQPA
                     VHLSSDPDFAATGDNAKSASARTSVKKSN"
     gene            complement(3972..4733)
                     /locus_tag="VE783_07815"
     CDS             complement(3972..4733)
                     /locus_tag="VE783_07815"
                     /inference="COORDINATES: protein motif:HMM:NF019342.4"
                     /note="Members of this family of hydrolases with an active
                     site Cys residue belong to MEROPS family C26; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamyl-gamma-aminobutyrate hydrolase
                     family protein"
                     /protein_id="HYX53344.1"
                     /translation="MSEPAGAKPKIAVTEPCSYDFEYSARAIPAYLHAIEDAGGDPVV
                     IQLTYTPQEVARLITGCAAVVLTGSRADVDPAKFGAKPHGKNAPPDEPRETADELLLQ
                     DAFNLRKPVLAICYGLQSLNVWRSGTLLQHISTMVNHQPGPGYTHPVTIEPDSLLAHS
                     INLSGRSTIPVNSSHHQSADRPGDGLRVVARCGDDGIIEALEGTSTDQYVLAVQWHPE
                     KDYKTDQHSRRLFLTLVDQARKWQRQHPLAAYSHE"
     gene            complement(4746..5573)
                     /locus_tag="VE783_07820"
     CDS             complement(4746..5573)
                     /locus_tag="VE783_07820"
                     /inference="COORDINATES: protein motif:HMM:NF013702.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysophospholipid acyltransferase family protein"
                     /protein_id="HYX53345.1"
                     /translation="MAEQSQLTAQTEAHESGLPHFLSRLRSYFIFDPLIWLYTIVLGS
                     LSLISSLLDKDGEIQHGFARFWSRMILATIGIPVQVIGLEKIDTSRSHVYVVNHLSAL
                     DIPVLYVHLPFQFRILAKKELFRYPFMGWHLKRSGQIPVVLDNAKASIRSLTLAVKAV
                     QNNMPLVVFPEGGRSETGQLQPFMGGAFFAAIRAQTDVIPMALVGTYEILKMNTWHIR
                     PRPVQLWVGDPISTEGMTTRDTETLSARARQAIAMLYYAHGEIPDLRENQPTQESRK"
     gene            complement(5566..6936)
                     /locus_tag="VE783_07825"
     CDS             complement(5566..6936)
                     /locus_tag="VE783_07825"
                     /EC_number="6.3.2.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR01499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004326 - tetrahydrofolylpolyglutamate
                     synthase activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008841 - dihydrofolate synthase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006730 - one-carbon metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="folylpolyglutamate synthase/dihydrofolate
                     synthase family protein"
                     /protein_id="HYX53346.1"
                     /translation="MAITYENAVERLIALGHELATHRKFDLEHMRVLAAALGHPERRL
                     QSVLIAGTNGKGSTAATLASIVQAAGYRTGLYTSPHLIRVNERIRVNGESISDPEFAL
                     IFERVDRAAQELVANGSLPWYPSFFEVLTAMMFEYFASVGVELAVLEVGMGGRLDATN
                     IAEPAISVITDIDFDHQKFLGNTLPEIAREKAGIIRPGGTVVLLPQHPQVNDTLGKEI
                     MARNAQPVSAVQYMPPLTPSAHHGRRNGESTAAESFPIEVAGAEISITPPLPGRHQFR
                     NLALAIAAAQQLNHFGFRVQPRHIEQGVRGTQWPARFQVIAAESASPEIVLDVAHNPA
                     GAWALRSTLSERYQDLPLTFIFGAMRDKAISEIAGILFPLAECVILTQADNPRAATPA
                     ELRDAAQHTGATLIEAADVSSALERARAQVGSNGGIVITGSIYIVGEALKLLSAAPAT
                     QGAWHG"
     gene            complement(6940..7791)
                     /gene="accD"
                     /locus_tag="VE783_07830"
     CDS             complement(6940..7791)
                     /gene="accD"
                     /locus_tag="VE783_07830"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR00515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009317 - acetyl-CoA carboxylase complex
                     [Evidence IEA];
                     GO_function: GO:0003989 - acetyl-CoA carboxylase activity
                     [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase, carboxyltransferase
                     subunit beta"
                     /protein_id="HYX53347.1"
                     /translation="MAWFKRESGELQASEDKRVRTEGLWVKCDGCRQIIWKKDLEENA
                     NVCPKCSHHFRIDAPTRLMLLLDEDSIETFDGELASTDPLNFTDTRPYKTRLQASQQN
                     TGLKDAIINASGTLNGRPVVISAMEYSFIGGSMGAVVGEAITRVIERGLKERKPVIVV
                     SASGGARMMEGVVSLMQMAKISAALARLDEAKIPYISVLTDPTTGGVTASYAMLGDLN
                     IAEPGALIGFAGPRVIEQTIRQKLPEGFQRSEFLLQHGMLDAVVHRKEMKSYISRALD
                     FMMPKAG"
     gene            complement(7807..8343)
                     /gene="cobO"
                     /locus_tag="VE783_07835"
     CDS             complement(7807..8343)
                     /gene="cobO"
                     /locus_tag="VE783_07835"
                     /EC_number="2.5.1.17"
                     /inference="COORDINATES: protein motif:HMM:NF004637.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008817 - corrinoid adenosyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0009236 - cobalamin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cob(I)yrinic acid a,c-diamide
                     adenosyltransferase"
                     /protein_id="HYX53348.1"
                     /translation="MSDPHRGLIIVNTGPGKGKTTAAMGTALRAVGNGMKVLMLQFLK
                     GSWHYGELDAVKAFGDNFVMKQMGRGFVKVGGAETDPEDIRMVEDAWKEAEQAIMSGQ
                     WELVILDEINYAISYGMLDPAKVAETLKRKPERVHVILTGRNAHPTIIELADTVTEMK
                     QVKHAYEKGVLAQRGIEY"
     gene            8510..9220
                     /locus_tag="VE783_07840"
     CDS             8510..9220
                     /locus_tag="VE783_07840"
                     /EC_number="2.3.1.286"
                     /inference="COORDINATES: protein motif:HMM:NF014228.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0070403 - NAD+ binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Sir2 family NAD-dependent protein deacetylase"
                     /protein_id="HYX53349.1"
                     /translation="MEQTSKTERVFVLTGAGISAESGIPTFQGTNWRGRSHYELANID
                     AWNAGPALVWDYYSERRRRARDAQPNAAHFALGEFEQSRGSGTFFLCTQNVDNLHEAA
                     GSRNLVHIHGQVFQTRCAEDCGRPGFHDTKDYQSEDLPRCECGALQRPDVVWFGEQPY
                     GLDRVFRELEACDVFVAVGTSGNVQPVAGFVAQLKSGKKSVRTIFVGLEEPTNAGYFD
                     EIYLGPATVKLTEALKHL"
     gene            9384..9977
                     /locus_tag="VE783_07845"
     CDS             9384..9977
                     /locus_tag="VE783_07845"
                     /inference="COORDINATES: protein motif:HMM:TIGR00730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR00730 family Rossman fold protein"
                     /protein_id="HYX53350.1"
                     /translation="MAEIKSICVFCGSSFGARPGYQVAAEELGRLLAQRGIRLVYGGG
                     CVGLMGAIADATIAAGGEVTGVIPDSLLRREVGHRGVTKLHVVETMHQRKSLMADLSD
                     AFIALPGGFGTFEEMFEIVTWSQLGIQHKPIGLLNIEHYWDHVLRAMDHAVAEQFLKR
                     ENRELVLVAERPQEMLEKLHAWQAPPHIEKWMDEARR"
     gene            9979..10296
                     /locus_tag="VE783_07850"
     CDS             9979..10296
                     /locus_tag="VE783_07850"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53351.1"
                     /translation="MTDSLRWMLIVFAAAILSYGLWTAFLVFITLMAESGGKNPEPLL
                     ALALLWPWAELIWTWFFVKRRSQSYPLMPRGVRMAGEFLAGVALITPAPVFIVIDLQH
                     PSK"
     gene            10419..10688
                     /locus_tag="VE783_07855"
     CDS             10419..10688
                     /locus_tag="VE783_07855"
                     /inference="COORDINATES: protein motif:HMM:NF037968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SemiSWEET transporter"
                     /protein_id="HYX53352.1"
                     /translation="MLPSPFITGLGFVAGTLTTLSFIPQVHKAWRTRRCDDLSLGMLL
                     AFGSGVTLWLIYGLLVHSAPIIAANAVTLALILVLLYMKARFRGA"
     gene            10936..11712
                     /locus_tag="VE783_07860"
     CDS             10936..11712
                     /locus_tag="VE783_07860"
                     /inference="COORDINATES: protein motif:HMM:NF014035.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HYX53353.1"
                     /translation="MPPSHVVLLFCAATLAGAVNSVAGGGGFIAFPALLFTGMPSINA
                     NATNTVALWPGTLASTGAYRKALNGGLLRSILPLVIITFVGSLAGSWLLLHTRQSTFD
                     KMVPWLLLGATILFSIGGKVTRWITRHHAEGGPSALRVVGVTTLQACVAVYIGYFGAG
                     VGIVMLALLAIMGLENIHSMNGLKTLLATCGNAVAVVMFVFAHAVFWPQALLMVVGAG
                     LGGYAGAWYAQRLDPKVVRYIVMAVGYSMTVYFFWRTYLK"
     gene            complement(11891..12280)
                     /locus_tag="VE783_07865"
     CDS             complement(11891..12280)
                     /locus_tag="VE783_07865"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53354.1"
                     /translation="MRDHAQELLCFHGLTGEWEFPELVLIFGQLLLTGFWVSVALDVA
                     IVNKTFKTTFCLHLGPAVAVIVTFKVFTSPGDEQPHPHRNMDRFQTTNIARIAREKKA
                     VPLCLLRSFHTLLTQTGEGGISKDEGR"
     gene            12561..>14292
                     /locus_tag="VE783_07870"
     CDS             12561..>14292
                     /locus_tag="VE783_07870"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53355.1"
                     /translation="MFQRARFTAWLLICLAVCLAALPTLAQVSQPNADGTQDASAAPQ
                     GSSPASPQLSILTVQQPKLFHGTPWRDPNAPNGATQAGPVGFAAPAGAHLSYFGGPII
                     SNVQVIQVLYGSGSYNSQVAGTTSPTMGQFYGDITGANSGYTSFLQQYNTNISGGTNQ
                     VFGNGTFGGLFQIVPAAGNNGSTITDTQIQSELLSQITAGHLPAPVLDAGGNPNTLYM
                     IFFPPGKTISQGGSNSCQAGGFCAYHGTTSSLFSGKHVLYGVMPDMQAGSGCATGCGT
                     STVFGNYTSVTSHELTEALTDADVGIATTFAAPLAWYDQTNGEIGDICNGQQGSYTAN
                     GTAYTVQLEFSNSASNCVNFPPAPTGANFSLSASPSSVSVTQGSNASSTITVTPSGGF
                     TGSVTLSTSALPSGVTASFGTNPTTGTSVLTFTASSTATTGTSTVTVTGTSGTLTHTT
                     SISLTVSATATPNFSLSASPASLSVTQGSSGNSTITVTPSGGFTGSVTLSASGLPSGV
                     TAAFGTNPTTSTSVLTLTASSTATTGAATVTITGTSGTLTHTTTISLTVNAAGGTTQL
                     IGNPGFENSTA"
BASE COUNT         2898 a         4049 c         4219 g         3126 t
ORIGIN      
        1 ccaagcattt tactggcctc aagtgctatg accctggaca acagaggtcc gttacgtcag
       61 ttacatggtc aggggcggca atctccggta ctttctgagg catggcttta caagcgctcc
      121 tcctcagccg agaccccgaa gctcagcgca ctgtccgccg cgttctggat tcagccaaca
      181 ttgagcttga tgtggccaac agccacgacc aggcgcgttt ggcgcttacc cgccggaagt
      241 acgacacttt tctcgtcgat tgcgatgaca tgccacacgg cccagccgtg ttgaaggagc
      301 tgcgccaggg caagtcaaac cgcagctgta ttgtctttgc gattgtaagc acgcgtacca
      361 ccgtgcagca ggcgtttgag ctgggagcca atttcgttct cgataaaccg atctccattg
      421 aacgcgccac acgcagcgtg cgcgccgcac aaggactgat acttcgcgaa cgccgacggt
      481 atcatcgcca cctggtgcgg gccacgggcg cgattctggt ggactccggt tcagagctgc
      541 cagtgagcat taccaacatc agctgtggcg gaatttccat tgaatgcagc cgtcgcctgg
      601 atgaaggcgg cgctgcgcgg gtgaagttcc atttaccggg cacacgccgc gcgctggaag
      661 tgaagggtga ggtgatctgg tccacgccgg aaggcaaatc tggaatccgt tttcaggtgt
      721 tgccggtgga agtgaaaaaa gagctggatg cctggctgga tcgccgcgcg ctgccgctga
      781 acggcgcaat gttcatcaac gctactatgt aatcaggctt cgccgagccg gggcgttgcg
      841 atggcgagtc ccggcatggc tttttcttcc tgcgccagtt caatcgtttc ttcccacaaa
      901 gagcgatctt tcaggagacg cgagacgagc gccgtgtgca tggcatggcc ggcgcgctcg
      961 gccacaatgc gcccgatgat ctgcttgccc aggagtgcca ggtcgccgat caggtcaaga
     1021 atcttgtggc gaacgaattc atcttcaaac cggagcggcc cgttctttac tccggaatcc
     1081 gtcaccacga ttacgttctc ttcggtggcg ccgcgaatta gacccatgtt gcgcatggcc
     1141 tgttcttcac gaagaaagcc aaaggtgcgg gccggcgcga tctcgcggcg ataaagatcg
     1201 cgtgataggt ccacttcaaa ggaaagctcg ccgatgggct gcgcaaaatt gatgtggtaa
     1261 gagactgcgt atccgggagc ggggtacgcg gcgatgaatt tattgccgtc gcggacctca
     1321 atttcgcgct taatgcgaag gtaagtgcgc ttgcggcgct gctggcgcaa tcctgcctgc
     1381 agcaccagat ccacgaaagg cttggcactg ccatcgagaa tgggcagctc caggttatcg
     1441 agctctacca cggcgttatc cagaccaatc ccgatgaatg cggagagcag gtgctcagtg
     1501 gtggagatca ggacgccttt cttctgcagg ctggtggcgt aactcacttt agccacatta
     1561 cggccaatgg cttcaatctc aaagccatca agatctgagc gacggaacac gattcccgtt
     1621 cccgcaggcg cgggcaaaat ccgcagcttg accggtgcgc cgctgtgcaa acccaccccg
     1681 cggcattcca ccggcatacg aactgtctgt tcgaatggca agtgtttact gctgaataga
     1741 ttacacctca ggttaagagg gttgctgttg tattttaacc acagggtgtg gccactccag
     1801 cttacctttt cttctctttc tctggctcgt gcttaatgag cactggagtg aagtaattgt
     1861 caggcgggcg ctgattgtaa acgatgttcg tgatggcctg ctgacgcgcg atctgcccgt
     1921 tgtgaagggt aaccgtggtg aatggggtat tgatgccctg cactagccgc caatttccgt
     1981 aaatttcttc ttcctgatcg cgatcgagtg tattattcgg gtcattccga gtttcgggtt
     2041 cgcgaacggt aaaccgcttg gatacgggta gatgagtgtc gggagcaatg agtatgctcg
     2101 ccgcctcatt ttgagcgttg atgacggtga ttcgctccgt cattttgttg tctgccagcg
     2161 tgggcccctc gtccagaagg agagtgccgg gctggttgat ccactctcgt agaatttgct
     2221 caagggcaaa tcgccgacgg accatgccga gccgcacggt tgcatccttt ttcggatcaa
     2281 gttcttttcc gcccctgaag gtgatttccc aaatcttatc ctcaatcacc aggcttgcga
     2341 tgtcgcgttc tttggtggct tcaaagcgtt ccttgtccgg ccactgccag taacggaaga
     2401 acacagcgcc cccaaccatg ttttcattgt gaaaacggcc atagcggccc tcactatagg
     2461 agtcatgcag ggtgagatac gcctggccac caagtgcgtc aatcatttgc ttgatccaga
     2521 cgcgagcctt ttgctcgttg gattgcgcct cctggccggt gttgggtgaa ggaggagcag
     2581 gctggacagt ctgctgcgct gttgccgcgc ccacagccag caagagtaaa aaagtaattc
     2641 tcatttgcag attggttttc acggttagat gcagcgaaga gctgagctgc tgcttagccg
     2701 acaaggacag cgcctccgtt cacgttcacg atttccccag tgataaagcc cgcgtacgga
     2761 gtgcacaaga atagcacggt gccggcaatc tcttcaggag ttcctacccg gccgagaggg
     2821 atggtgttaa agatcttatg gctggtagca ggatcgcgaa gcgccggcgc cgccatatcg
     2881 gtttccaccc aacccggagc aacgcaattt acgtagatac gctcgcgggc cagttcagta
     2941 gagagtcctt tcaccatgct gatgattgcg cctttgctgg cggcgtagtc gcagtgaaag
     3001 gcttcgccgc gctggccggc agtggagctg atcagcacga tatgtccgcc ttgcccctgg
     3061 ttcttcattt gcgccacgcc gtacttcacc agaccaaaaa gactgtcaac attgatggca
     3121 agggtagaac gccactgctc gtcgctcatg cggtcaatcg ccacatcctg agaaggccag
     3181 acgccgtgat tgcccaccag aatgtcaacg ctgccaaacc gttcaatggc cgcattgaca
     3241 agcttccgag cggcctccgg cgattgcagc tcagcagata ccgccgccac gcaggctgcg
     3301 ccgccgcact cggcttccag tttgtgtgcg gcttccgcag cgcgctgata attgaagagc
     3361 acccgagctc cggcacggca gaagagcttc acgcaggccg caccgattcc gcgtgagcct
     3421 ccggtgatca cggccacgcg accttgaagt gacagcgcta tgccctgaga agacatggct
     3481 tccacgataa gggagggcag aacagacgcg caactctggc gtggcgttga gtggttttta
     3541 agaatttaat tgctcttctt cacggatgtg cgtgcggagg cggatttggc attgtcaccg
     3601 gtagcggcaa aatccggatc gctgcttaaa tgcacagcag gctgaatgag ggtgaaagag
     3661 acgcgagaag tacagcggcg gcaaacgggg aacagctcac cctctttcgc aaagacctca
     3721 tggggcatgc ggtgctgata gtgcgtcacc gcgtagacgc ccgtcacggg tacaatttcg
     3781 ccgggtctga agggcccttt ttccattccg tggtccgagg ccaggggaac ccaaaaagcg
     3841 gaaacaaaag cagggactaa acgaatgata agaagagttt agtgctcaat caatgactcg
     3901 aattacctaa tcctgccgat ttttgccgaa tccagcagca ctaaatgtga gccgggcaga
     3961 cttacaaaat gtcactcatg ggagtaggcg gccagagggt gctgccgctg ccatttgcgt
     4021 gcctgatcaa ccagagtaag gaacaggcgg cgggaatgct gatcagtttt gtagtccttc
     4081 tccggatgcc actgcacggc aagcacgtac tggtcagttg acgtgccttc aagggcttct
     4141 atgattccgt cgtcgccgca ccgggcgaca actctaaggc catctcccgg acggtctgcc
     4201 gactgatgat ggctggagtt gaccggaata gtgcttcgcc cggaaagatt gatggaatga
     4261 gcgagcagag aatcgggctc aatcgttacc ggatgagtgt agcctggccc cggctggtga
     4321 ttcaccatgg tgctgatgtg ctggagcaga gtgccgctgc gccagacgtt caacgactgc
     4381 aaaccgtagc agatcgccag cacgggcttg cgcaggttga aggcgtcctg cagcaagagt
     4441 tcgtctgccg tctcgcgggg ttcgtccggg ggagcatttt tgccgtgggg cttggcgcca
     4501 aacttggccg gatcaacgtc tgcccggctg ccggtcagta ccacggcggc gcatccggta
     4561 atcaggcgag cgacctcctg cggagtgtac gttagctgaa tcaccacggg gtcgccgccc
     4621 gcgtcttcaa tggcgtgcag gtaagcgggt atggcccgcg cgctgtattc aaaatcgtaa
     4681 gaacagggtt cagtgaccgc aatcttcggt tttgcgcctg ctggttcgct caattcattc
     4741 cacctttact ttcttgattc ctgcgtgggc tggttctccc gcagatcggg aatctcgcca
     4801 tgagcataat agagcatcgc aatagcctgg cgcgcgcggg ccgaaagcgt ttccgtatcc
     4861 cgtgtcgtca tgccctcggt ggagatggga tcacccaccc aaagctgtac cggccgcggc
     4921 ctgatgtgcc aggtattcat tttcaggatt tcgtatgtgc ccacgagcgc catgggaatt
     4981 acatccgtct gagcccggat cgcggcgaag aacgcaccac ccataaaggg ctgaagctgc
     5041 ccggtctcgg agcgcccgcc ttcagggaaa accacgagcg gcatattgtt ctgtactgct
     5101 ttcactgcaa gcgtgaggct gcggatggaa gcttttgcgt tgtcaagcac aaccggaatt
     5161 tgcccggaac gcttcaggtg ccagcccatg aagggatacc ggaagagctc ttttttggcg
     5221 aggatgcgga actggaacgg caaatggacg tagagcacgg ggatatcgag cgcggaaaga
     5281 tgattcacca catacacgtg agatcgcgat gtatcaattt tttccaaccc gataacctgc
     5341 accggaatgc cgatggtggc cagaatcatg cgcgaccaga atcgcgcgaa gccgtgttga
     5401 atctcgccgt ctttgtccaa aagagaggag ataagtgaaa gcgagccaag gacgatggtg
     5461 taaagccata tcagcggatc gaaaatgaaa tacgagcgca ggcgcgaaag gaaatgcggc
     5521 agaccgcttt cgtgcgcctc cgtttgggcg gtgagctggc tctgctcagc catgccatgc
     5581 accctgggtg gccggcgccg cagaaagcag cttgagcgct tcgcctacga tatagatgga
     5641 gccggtgatt acgatcccac cgttgctgcc cacctgcgcg cgtgcgcgct ccagcgccga
     5701 tgaaacatcc gccgcctcga tcagcgttgc accggtgtgt tgcgcggcat ctctcaactc
     5761 ggctggcgtc gccgcgcgcg gattgtcggc ttgagtgaga atcacgcact ctgcaagagg
     5821 aaataaaatg cctgcgattt ctgagattgc tttgtcgcgc atggcgccga agatgaaggt
     5881 aagcggaaga tcttgataac gttctgagag tgtggagcgc aacgcccatg cgcctgcggg
     5941 attgtgtgcg acatcaagaa caatctccgg cgaagctgat tctgcagcga tcacctggaa
     6001 gcgtgccggc cactgagttc cacggacgcc ttgttcgatg tgtcgaggct gaacgcgaaa
     6061 accgaaatga ttcagctgct gcgcggcggc aattgcgagt gcgagattcc ggaactggtg
     6121 ccggccaggc agcggcggag tgatgctaat ctctgctccc gccacttcga tgggaaagct
     6181 ttcagcggca gtagactcgc cattcctgcg tccgtggtgg gcactcggcg tgagcggtgg
     6241 catgtactga accgcgctta ccggctgggc gttgcgcgcc atgatttctt tgcccagcgt
     6301 gtcattcacc tgcgggtgct gcggcagcag gacaactgtc ccgccggggc gaatgatccc
     6361 ggctttttcg cgtgcgatct cagggagcgt attgcccagg aatttctggt gatcgaaatc
     6421 gatgtcggta atgacgctga tcgcgggctc cgcgatgttg gtggcatcca ggcggccgcc
     6481 cattcctact tcaagtaccg ccagttccac gccaacgctc gcgaagtact cgaacatcat
     6541 ggctgtgagc acttcaaaga agctgggata ccagggtaga gatccattcg cgaccaactc
     6601 ctgggcggcg cgatctacac gttcgaagat gagggcaaat tccgggtcgc tgatggattc
     6661 gccattgacg cgtatgcgct cattcactcg aatcagatgc ggcgacgtgt acagcccggt
     6721 gcggtatccg gcagcctgaa caatgctggc cagcgtggcg gcagtggaac ctttgccatt
     6781 ggtgcccgcg atgagaacac tctgcagccg tcgctccgga tggcccagcg ccgcggcgag
     6841 cacgcgcatg tgctccagat caaatttgcg gtgcgtggcg agctcatgcc ccagggcgat
     6901 gagcctttcc actgcgttct cgtaggtgat ggccacggtc tacccggcct tcggcatcat
     6961 gaaatcaagc gcgcgcgaga tgtagctctt catctccttg cggtgcacca ccgcatccag
     7021 catgccgtgc tgaaggagga attcgctgcg ctggaaacct tccggcagct tctggcggat
     7081 ggtctgctcg atcacgcgcg gtccggcaaa tccgatgagc gcacccggct cggcgatgtt
     7141 gagatcgccc agcatggcgt aggaggcggt gacgccgccg gttgtgggat cagtcaagac
     7201 agagatgtag gggatcttcg cttcatcaag tcgggccagc gcggcggaga tcttagccat
     7261 ctgcatcagg ctaacgacgc cttccatcat ccgggcgccg ccggaggcgg aaactacgat
     7321 caccggcttg cgttctttca ggccgcgctc aatcacgcgc gtaattgcct cgcccaccac
     7381 cgcgcccatg ctgccgccga tgaacgaata ttccatcgcg cttatgacca cgggccggcc
     7441 attcagcgtg ccgctggcgt tgatgatcgc gtctttgagt ccggtgttct gctggctggc
     7501 ctggaggcgg gtcttgtaag gacgagtatc agtaaagttc aggggatcag tggaggccag
     7561 ttcgccatcg aaggtttcga tgctgtcttc atccagcagc agcatcaggc gcgtcggggc
     7621 gtcaatgcgg aagtgatgac tacacttggg gcagacgttg gcgttttctt ccaggtcctt
     7681 cttccagatg atctggcggc acccgtcaca cttgacccag agcccttcgg tacgcactcg
     7741 cttgtcttct gacgcctgga gctcgccgga ttcccgctta aaccacgcca acttgaattc
     7801 ccttccttaa tactcaatgc cgcgctgggc cagcacgcct ttttcgtacg cgtgcttcac
     7861 ctgcttcatt tccgtgaccg tatcggccag ttcaatgatt gtcggatgcg cattccggcc
     7921 cgtcaagatt acgtgcacac gctcgggttt acgcttcagt gtctctgcaa cctttgccgg
     7981 atcaagcatg ccatagctga tcgcatagtt gatttcgtcg aggatcacca gttcccactg
     8041 gccggacatg atggcctgct cggcttcctt ccatgcgtct tctaccatgc ggatgtcttc
     8101 ggggtcggtc tccgcgccgc cgaccttcac gaatccgcgt cccatctgct tcatgacgaa
     8161 gttgtcgcca aaggccttca cggcgtcgag ttcgccataa tgccacgagc ctttgagaaa
     8221 ctgcagcatc agcaccttca tgccgttccc gaccgcgcgc agggccgtgc ccatggcagc
     8281 ggtggtcttg cccttgccag gaccggtgtt cacgatgatg agaccgcgat ggggatctga
     8341 cattgtcgaa gtcctcagct gcgtcgaagg agcaattagc caaaccgagc atgcaattcc
     8401 acggaagcgc gggatgaaac catatccaag tgccttctgg ctaattgcca gttactattt
     8461 gctaattgct gttattccca aacttaaaat tatattgagc gcaagcgaca tggagcaaac
     8521 cagcaaaacg gagcgcgtat tcgtgcttac cggcgcaggc atcagcgcgg agagcggcat
     8581 accgaccttt cagggcacga attggcgcgg caggagtcat tacgaactgg caaatatcga
     8641 tgcgtggaat gccggtccgg cgttggtgtg ggactactac tcggagcggc gccgccgggc
     8701 gcgtgatgcg cagcccaacg cggcgcattt tgcgttgggg gagtttgagc agtcacgtgg
     8761 gtcgggcact ttttttctct gcacgcaaaa cgtagataac ctgcatgaag cggcgggctc
     8821 gcgaaatctg gtccacatcc atggacaggt gtttcaaacg cgttgcgcgg aagactgcgg
     8881 acggcctgga tttcacgata ccaaggatta tcagtcggag gatctgcctc gctgcgaatg
     8941 cggcgcgcta caacggccag atgtagtctg gtttggcgag cagccttatg ggctggatcg
     9001 cgtgtttcgc gagctggagg cgtgcgacgt gttcgtagcg gtgggtacgt cagggaatgt
     9061 gcagccggtg gctggttttg tggcgcagct caagtctggg aagaagtcgg tgcgcacgat
     9121 ctttgtcggc ctggaggagc cgacgaatgc ggggtatttc gatgagatct atctcggccc
     9181 ggcgacggtg aagctaacgg aggcgctgaa gcacctttga gacacccagg aatttctcgt
     9241 tagacttcag ggttgtgcag cagcgcgtcc aggacatgga tggcgaacgc tacggggagc
     9301 ctttccagta ctggcccaat ctcgaaagaa aagaagaact gagccgcctt cgtggcgaca
     9361 tgcgcgtgta gtaaattctc ccggtggcgg aaattaaatc catttgcgtc ttctgcggat
     9421 cttctttcgg cgctcggccc ggctaccaag tcgcagctga agagcttggc cgcctgctcg
     9481 cgcagcgcgg gatcaggctg gtctatggcg gaggatgcgt tgggctgatg ggcgcgattg
     9541 ccgacgcaac aatcgcggcg ggtggagagg tcaccggcgt gattcccgat tcgctgctgc
     9601 ggcgtgaggt cggccatcgc ggagtcacga agctgcacgt agtcgaaacc atgcaccagc
     9661 gcaaatcgct gatggccgat ctatccgacg cgttcatcgc actcccaggc gggtttggca
     9721 cgtttgaaga aatgtttgag atcgtcacct ggtcgcagct cggcattcag cacaagccga
     9781 ttggcctgct gaacattgag cattactggg accatgtgct gcgcgccatg gaccacgccg
     9841 tggccgagca attcctgaag cgcgaaaacc gcgagctggt gctggtggcc gagcggccgc
     9901 aggagatgct ggagaagctg catgcctggc aggccccacc gcacatagag aaatggatgg
     9961 acgaggcacg gcgctgaaat gaccgattcg ctgcgctgga tgctgattgt gtttgccgcc
    10021 gcaattttgt cttacgggct ttggaccgca ttcctggtgt tcattacatt gatggccgag
    10081 tcaggcggca agaatcctga gccgctgctg gcgctggcgc tgctgtggcc atgggcggag
    10141 ctgatctgga cgtggttctt cgttaagcgg cgctcgcaaa gttatccgct tatgccgcga
    10201 ggggtccgca tggcgggcga gttcctggcg ggggtagcgc tgattacgcc cgcgccggtt
    10261 ttcatcgtga tcgatcttca gcaccccagt aaatgagaaa tggtttcagg tgctcggcag
    10321 tgccgtaaca attttctgct gctgggcagc gcgcctcgtg tggtcgcgcg gcatcaacgc
    10381 gcaggtggct gcagccagct gaagtatgct ggaggcagat gctgccgtct ccattcatca
    10441 cgggcctggg ctttgttgcc ggaacgctca ccacactttc ctttattcct caggtacaca
    10501 aggcgtggcg cacgcggcga tgtgacgacc tctcgctcgg catgctgctg gcattcggca
    10561 gtggagtcac gctttggctg atttatggat tgctggtgca ttccgcgccc atcatcgcgg
    10621 ctaacgcggt gacgctggcg ctgattctgg tgctccttta tatgaaggcg agatttcggg
    10681 gcgcatgagc tttgtgccgc cccctatacg gggctcggtt tctctattca cctgtactca
    10741 cctctccgcc agcgcgcaaa gcgcgcatgg ctccgaagtg ggctaacgtc ttgacgggcc
    10801 tactgccctg aacgtgggag ctccttcgca ctcctatcct attgagtatg ggtgcgcaga
    10861 atcagcgcaa aatgcaagcc cagacattgc agccgcggtt cgccgaatcg cacggtcaat
    10921 tgtttacact aaccagtgcc cccctcgcac gttgtccttt tattttgcgc ggccacgctg
    10981 gccggcgcgg tgaattccgt tgccggaggc ggcggcttca ttgccttccc tgcactgctc
    11041 tttaccggca tgccttccat caatgcgaat gccactaaca cggtggcgct gtggccgggg
    11101 acgctggctt ccaccggcgc atatcgcaag gcgctgaacg gtggcctgct caggagcatt
    11161 ctgccgctgg taattatcac gtttgtggga agcctggccg gctcgtggct gctgctgcat
    11221 acgaggcaat ccacattcga caagatggtg ccgtggctgc tgctgggcgc aacgattttg
    11281 ttcagcatcg gcggaaaagt aacgcgatgg atcacgcgcc accatgcaga gggcggcccg
    11341 tcggcgctgc gtgtggtggg cgtgaccaca ctccaggcct gcgtggccgt ttacattgga
    11401 tactttggcg ccggagtggg gattgtgatg ctggcactgc tggcgatcat gggcctggag
    11461 aacattcact ccatgaacgg tttgaaaact ctgctggcaa catgtggcaa tgccgtggcg
    11521 gtggtgatgt tcgtttttgc ccacgccgtg ttctggccgc aggcgctgct catggtggtg
    11581 ggcgccggcc tgggcggcta tgccggcgca tggtatgcgc agaggctcga tccaaaagtt
    11641 gtccgctaca ttgtgatggc ggtgggctat agcatgacgg tgtatttctt ctggcggacg
    11701 tatttgaagt aaatagtaat tagcaattgg taattagccg aaccagaatc agctgatgtt
    11761 acgttgagag atgtcatact caggcgttcc tccacggcct gcgatcgtgg tattgctact
    11821 cctcggtacc tttttcatat caggatcgcg gtcaactgct cgcgctttct actctccctc
    11881 atttgaggcg ttatctcccc tcgtctttgg aaatgcctcc ttctccggtc tgcgtcagaa
    11941 gcgtgtgaaa ggatcgaaga agacagagag gtactgcctt cttctcacgg gcgatccgcg
    12001 cgatattcgt agtctgaaaa cggtccatat ttctgtgggg gtgcggctgc tcgtcgccgg
    12061 gcgaagtgaa gaccttgaag gttacgatca cggcgacagc tggtccaagg tgaagacaga
    12121 aggtggtctt gaaggttttg ttgactatgg cgacatcaag tgcgacggag acccagaatc
    12181 ctgtaagcag taactgccca aagatcagaa ccagctcggg aaactcccac tctcccgtga
    12241 ggccatggaa gcacagtaat tcctgagcgt gatcgcgcac tcctgatgca gagctcctga
    12301 aatcagttgt acatccaggc accgaatgtt gctacacggc ggttcatgtt ccgaaatcag
    12361 gaaaaacctg ttccgttttg ggaatgaaca atggttcaga cccgcatttt tactggctac
    12421 ttagctcctt tgttcctgtc ctaaattcct gttggcatcc atcaactttg gtttactatg
    12481 tagcaccgcc gcacaaggtt gacggttcgg gccccttctt caaacgtcca ccgcgacgca
    12541 atgtatagga gagtaaaaga atgtttcagc gtgcgcgttt caccgcatgg ttgttgatct
    12601 gtctggcagt ttgtttagca gccctgccca cactggcgca ggtttcacag cccaacgcag
    12661 acggaaccca ggacgcatca gccgcgcccc agggttcatc cccagcttca ccccagcttt
    12721 ctatactcac ggttcagcaa ccaaaacttt ttcacggcac gccgtggcgt gatcccaacg
    12781 ctccgaacgg cgccacccaa gcgggtccgg taggctttgc agctcccgcg ggcgcgcacc
    12841 tttcttattt cggtgggccc atcatttcca acgtgcaggt gatccaagta ctgtacggaa
    12901 gcggttcgta caactcgcag gttgcaggca ccacctcgcc gaccatggga caattttatg
    12961 gtgacataac cggcgcgaac agcggctaca ccagcttcct gcagcagtac aacaccaaca
    13021 tctccggcgg caccaaccag gtgttcggca acggtacgtt tggtgggctg ttccagattg
    13081 ttcccgctgc gggaaataat ggatcgacga tcactgatac gcagatccag tcggaactgc
    13141 tttcgcagat caccgcagga cacctgccgg cgccggtgct tgacgcaggt ggcaatccca
    13201 acaccctgta catgattttc ttccctccgg gaaagacgat ctcacaaggc ggctccaaca
    13261 gctgccaggc cggcggattc tgcgcatatc acggcaccac gtcaagcctg ttcagcggca
    13321 agcacgtgct gtacggcgta atgccagaca tgcaggcggg cagcggctgc gccacgggtt
    13381 gcggtacctc gacggtgttc gggaattaca cgtcggtaac gagccacgag cttactgagg
    13441 ccctcacgga cgctgatgtg ggaatcgcca cgacgtttgc tgcgccgctg gcgtggtatg
    13501 accagaccaa cggcgaaatc ggcgacatct gcaacggcca gcagggttca tacacggcca
    13561 acggcactgc ctacacggtc cagctggagt tctcgaactc agcgagtaac tgcgtgaatt
    13621 tcccgccggc tcccacgggc gctaacttct cgttgtcggc ttcgccttcg agcgtgagcg
    13681 tgactcaggg cagcaacgcc agttcaacca taaccgtgac cccaagcggc ggcttcactg
    13741 gatcagtgac tctctccacc tctgcgctgc ccagcggcgt aacggcgagc tttggaacga
    13801 atcccaccac cggtaccagc gtgctgacct ttactgccag ttccacggca actacgggta
    13861 cgtcaaccgt tacagttaca ggaacgtctg gaacacttac tcacaccacc agtatttcgc
    13921 tgaccgtgag cgccacggca acgccaaact tctcgctgtc ggcatcgcct gccagcctga
    13981 gcgtaacgca gggatcaagt ggaaatagca ccatcactgt gacaccgtca ggcggattca
    14041 cgggttcggt aactctgtcc gcatcgggac tgccctcggg cgtaaccgct gcgttcggca
    14101 ccaacccaac gacttccacc agcgttttga cccttacggc tagctcaaca gcaaccactg
    14161 gtgccgctac ggttacgatt accggcactt ctgggacgct gacgcacacc accacaatct
    14221 cgctgacggt gaatgcagca ggcgggacga cacagttgat cggcaatccg ggatttgaga
    14281 attccacggc ag
//
LOCUS       DASQYP010000241         2320 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_157261, whole genome shotgun sequence.
ACCESSION   DASQYP010000241 DASQYP010000000
VERSION     DASQYP010000241.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 2320)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2320)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2320
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_157261"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(856..2106)
                     /locus_tag="VE783_07875"
     CDS             complement(856..2106)
                     /locus_tag="VE783_07875"
                     /inference="COORDINATES: protein motif:HMM:NF013752.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HYX53356.1"
                     /translation="MNLLRGLWCYGNKVFALSQRLAAVGNHRCQPEIPTRSLTCSLFL
                     GALMRVESFLQLQAETARPGWQRLIGWSRRISDDALVYALERYYLQDLREVLVDINKD
                     LKRNKALESAKINGLLVVALDANEQFHSRHRCCEACCQRTIQVKDKEGRVREVTEYYH
                     RQVYAQLHGPELSTILDLEPIRPGEDEAAAALRLLGRLRRTYGPRFFDVVSVDAWYAT
                     EPFFTAVRKLGWLLVAVLKQERYDIYKEATALSQRQQAQQITVDERQIKLWDVRDLNF
                     GKLSSMRVVLAEERWEQNKQTGTDKIRQTVQSNWRWLTDERLDGYGPQVIWRIGHQRW
                     GVENHAFNELTQYYHLTHCPHHEPVAIIAWLLFLILGLTMFELFVRLNSKLWRQGRTT
                     LKELWRQLDHAMERVSELQPLWSG"
     gene            complement(2110..>2320)
                     /locus_tag="VE783_07880"
     CDS             complement(2110..>2320)
                     /locus_tag="VE783_07880"
                     /inference="COORDINATES: protein motif:HMM:NF042840.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF6788 family protein"
                     /protein_id="HYX53357.1"
                     /translation="CHHGGDKHGPFYYLTQCLAVGKVAKFLLKTQAQQQQAKSGVAHY
                     RQLQEQLEELSQINTELLRREGPLD"
BASE COUNT          474 a          717 c          653 g          476 t
ORIGIN      
        1 acatgccact gagtgcaggc tgcacgttcc aacttcgccg gctcgccgct ccataaaccg
       61 cccaatatgc ttgggcccga gcttccgagg gcggacgcag ccacggccaa acgctctttt
      121 cagaaaccct cgcacgttgt gccgatgtag ccggcgggtt tgctccgtca gcccgcaaac
      181 gtgctgtaga tagtgatcgt agcggtcgag gagtccctcg acagaactca gtggctgcgg
      241 gcgctcccgc cgggccagtc ctggcccacg taggaaagac ctgaacgctg ccaaaatata
      301 acgcgaccgc cggacactgc tgggggcagg ctctaaccaa agccgcagcg gttgcagcag
      361 gaatctctca atgacggctt catccagcac cgacaatctc aggccctgta taaccatcca
      421 cgccgcacaa ccccgtgccg ccgctcgata agtcgccaac gtcgaagacg cgcatccctg
      481 gcctcgcagg taggctagaa agtcttcaat tatgcgcaga tgactgagtg aacccggacc
      541 agccaccggc gtgcttgcta acagcttctc attcatgagc ggaggtcgag agcacggctt
      601 ctcaacactc cgccaccctt ccttttacca ctccttgcgc tcaactaaaa gcttttcggc
      661 acagagattc cgcaaggtgg tgtggatttg gtgtaatgga cgcgggcgct gttttttcga
      721 gccggtggat cgtctgaggc aaggcgtcgg gacgctaccg cgccgattcg ggacgacacc
      781 tctcccgcgc tatgccggcg cgatgagttt gaatggcaaa gagcaggcaa ccccggtggg
      841 ttgccgccga caagctcaac cactccagag gggctgcagt tccgataccc tttccatggc
      901 atgatcgagc tggcgccaaa gctccttgag ggtggtgcgg ccctgacgcc acagtttgct
      961 gttcaagcgg acgaacagtt cgaacatcgt caagcccagg atcaggaaca acagccaggc
     1021 gataatggcc accggttcat gatgaggaca gtgagtcaga tggtaatatt gcgtcaactc
     1081 gttgaaggca tggttttcga ctccccagcg ctgatggcca atgcgccaaa tgacctgcgg
     1141 gccgtagccg tctaaccgct cgtcggtcag ccaacgccag ttgctctgaa cggtttggcg
     1201 gattttatct gtcccggtct gtttgttttg ttcccagcgc tcctcagcca gtaccacgcg
     1261 catggagctg agtttgccaa agttcagatc ccgcacatcc cacagcttga tttgccgttc
     1321 atccactgtg atttgctgcg cctgttgccg ttgacttaga gccgtggcct ctttgtagat
     1381 atcgtaacgc tcctgcttga ggacggccac tagcagccaa cccaatttgc gcacggccgt
     1441 gaaaaagggc tccgtcgcat accacgcatc gacgctcacc acatcaaaga accgggggcc
     1501 gtaagtccgg cgcaggcgac cgagcaaacg cagggcggcg gccgcttcgt cctcgcccgg
     1561 ccggatcggc tccaggtcca gaatcgtgct cagttccggc ccgtggagtt gggcgtaaac
     1621 ctgccggtga taatattcgg tcacctcacg cacccgaccc tccttgtctt tgacctggat
     1681 ggtgcgctgg cagcaggcct cgcaacatcg atgccggcta tggaactgtt cgttggcatc
     1741 cagggccacg accagtagcc cattgatttt ggccgactcc agagccttgt tgcgcttgag
     1801 gtctttgttg atgtccacca acacctctcg cagatcctgc aggtaatagc gttctaaggc
     1861 gtaaaccagg gcatcatcgc tgatccgacg cgaccaaccg atcaagcgct gccaacccgg
     1921 acgcgccgtt tcggcctgca gttgcaggaa actctccacc cgcatgagcg ctcccaggaa
     1981 aagactgcac gtcagacttc gggtggggat ctcgggctgg caacgatgat tacccactgc
     2041 ggccaggcgt tgagacaacg cgaagacctt gttgccgtag caccagaggc cgcgcaggag
     2101 gttcaccctt taatccagcg ggccctctct gcgcagcaac tctgtgttga tctgcgagag
     2161 ttcctccagt tgctcctgta gctgacgata atgagcgacc ccggacttgg cctgctgctg
     2221 ctgggcttga gttttgagaa gaaacttggc cactttgccg acggccagac actgggtcag
     2281 gtagtaaaaa ggcccgtgtt tatcgccgcc atggtggcag
//
LOCUS       DASQYP010000242         2568 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_31389, whole genome shotgun sequence.
ACCESSION   DASQYP010000242 DASQYP010000000
VERSION     DASQYP010000242.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 2568)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2568)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2568
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_31389"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..954)
                     /locus_tag="VE783_07885"
     CDS             complement(<1..954)
                     /locus_tag="VE783_07885"
                     /inference="COORDINATES: protein motif:HMM:TIGR00391.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008901 - ferredoxin hydrogenase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase small subunit"
                     /protein_id="HYX53358.1"
                     /translation="MAQSDSKTIASHLRSSGVTRRDFLQLCSMLMITAPAGLALTKTN
                     SIEKLAATIGGAPRPSVIWLHFQECTGCTETLLRTSAPDVGRLILDVISLDYHETLMA
                     AAGHQAEKALQSAIAANRGKYVLVVEGSIPLKDNGVYVEIGERRGIDILKDTAANAAA
                     IVAIGSCASWGGVQSSGINPTGAVGVDSIIKDKPIINLPGCPPNPYTLLAVVLEYATL
                     GKVPALDAQKRPLFAYSRVIHENCPRRAHFDAGRFAQAFGDEGHRQGWCLFKLGCKGP
                     VTHGACSWRHFNETPNVWPIGIGSPCVGCTEKTVGFEVPTFQ"
     gene            1227..1379
                     /locus_tag="VE783_07890"
     CDS             1227..1379
                     /locus_tag="VE783_07890"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53359.1"
                     /translation="MQVVALIPALARTAFPADGSTCRLKDYGWEQSTAGFFDFPVAIL
                     KDDWMA"
     gene            complement(1642..>2568)
                     /locus_tag="VE783_07895"
     CDS             complement(1642..>2568)
                     /locus_tag="VE783_07895"
                     /inference="COORDINATES: protein motif:HMM:NF020455.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CVNH domain-containing protein"
                     /protein_id="HYX53360.1"
                     /translation="LVLIMFGICMFAAWGTAAHAQGLPQGSYLQTCNNVSVNGDTLVA
                     TCQAANGALVNTQLPGFQNCQGEVINDNGNLRCNMAGGYGYGQPVGTYGAGGPFTQTC
                     RSVRYKGDDLHATCEATDGSWHETKLDDYRKCRGTIINDNGNLRCAAGVSYGAPVGGY
                     QGAYGGYQGVNGPAGSYLQTCQDVHVSGNDLRARCVTRDNRQRDARLDDYRSCRGDIV
                     NDDGHLRCASGAPVGGYYGNGPYGVAGAPGALNGPNGSYARTCSDIHVSGDDLKARCQ
                     TADGGLHDTKLDDYRKCHSDIINDNGNLRCQR"
BASE COUNT          527 a          726 c          793 g          522 t
ORIGIN      
        1 ctggaaagtc ggcacctcaa agcccaccgt tttttctgtg cagcccacac aaggcgagcc
       61 gattccgatt ggccagacgt tcggcgtctc attgaaatgt cgccacgaac aggcgccatg
      121 cgtaaccggg cctttgcaac cgagtttgaa caggcaccag ccctggcgat gaccttcatc
      181 accgaaagcc tgggcaaagc ggcctgcgtc aaagtgcgcg cggcgcgggc agttttcgtg
      241 gatcacgcgg ctgtaagcga acagcgggcg cttttgcgcg tcgagcgcgg gcaccttgcc
      301 gagcgtcgcg tactcgagca ccacagccag aagcgtgtaa ggattcggcg ggcatccggg
      361 cagattgatg atcggcttgt ctttgatgat cgaatccacg ccgactgcgc cggtcgggtt
      421 gatgccggaa gattgcacgc cgccccagga ggcacacgaa ccaatggcga caatagcggc
      481 tgcgttcgcg gctgtgtcct tgagaatgtc aattccgcgg cgctcgccga tttccacgta
      541 aacgccgttg tctttgagcg gaatggagcc ttccaccacc agcacgtact tcccgcggtt
      601 ggccgcgatt gccgattgca gggctttctc agcctggtgg cccgctgcgg ccataagagt
      661 ctcgtggtaa tcgagagaaa tcacgtccag gatcaggcga ccaacatccg gcgcggaggt
      721 gcgcagcagc gtctccgtgc agccggtgca ctcctggaag tgaagccaga tcactgacgg
      781 gcgtggtgcg ccgccaatgg tggccgcgag cttttcgatt gagttggttt tcgtcagcgc
      841 cagacctgca ggcgctgtga tcatcaacat ggagcaaagc tgaaggaaat cacggcgagt
      901 gacgccggaa gaacgaagat gacttgcgat tgtcttggag tccgactggg ccatcgaatg
      961 ccctcctggg cgtagggtcg gcgcttgggg gccgcgcggg tactcacaat gccggacaca
     1021 tgatcgcagt caacgtgaca caaaaccgtg atggcggtca cgcttgttta atgctttttc
     1081 acaaatgagc gcagcaggtg cgcgaatcga gagctgctga cgcgaatcac tgtggttgag
     1141 aggacggggg tacgaaacaa gtgtagagag caggggagga atctgagatg aggaaagcgt
     1201 gatcggagca gaagcggaat tggcctatgc aggtagtggc tcttattccc gcgctggcgc
     1261 gcactgcttt cccagccgat gggagcacgt gccggcttaa ggactatggt tgggagcaat
     1321 ccaccgctgg tttctttgat tttcctgtcg ccatcctcaa agacgattgg atggcctgaa
     1381 gtattgctct caggtgagtc aagatgcgcc ggaaatggcg cagatctggt aatgatcggt
     1441 cttgatgggg ggctttggct gtagtcgtcg cccgggacgc agccgaaatc ctgagcgaag
     1501 cgcagcggag tcgaaggatt ctgacattcg tctccagaac aaaataagag cggctggatt
     1561 gctccagccg cattcggata aacagagaag acgtcattgg tgatggctga tcgctaaacg
     1621 cggtcagacc ttattcttcg gctacctctg gcaacgcagg ttgccgttgt cattaatgat
     1681 gtcgctgtgg cacttgcgat agtcatccag cttggtgtca tgcaagccgc cgtcggcagt
     1741 ctggcagcgg gccttcaggt cgtcaccgga gacgtggata tcggaacacg tgcgcgcgta
     1801 gcttccattc ggtccattga gcgctccggg agcgccggca acgccgtagg gcccatttcc
     1861 gtagtagccg ccgaccggag cgccggaggc gcagcgcagg tggccgtcgt cgttaacgat
     1921 gtcgccacgg cagctgcggt aatcatctag cctggcatca cgctggcgat tatcgcgggt
     1981 aacgcaacga gctctcaggt cattgccgct cacatgaacg tcctgacaag tttgcaggta
     2041 cgagcccgcc gggccgttca cgccctggta gccgccataa gcgccctggt agccacctac
     2101 cggcgcgcca taagaaactc cagccgcaca gcgcaggttg ccgttgtcat taatgatagt
     2161 gccgcgacac ttgcggtagt cgtcgagctt ggtttcgtgc cagctaccat ccgttgcttc
     2221 acacgtggca tgcagatcat cgcccttgta gcggacactc cggcaagtct gggtaaaggg
     2281 gccgccggct ccgtaggttc ccaccggctg gccgtaacca tatccgccag ccatgttgca
     2341 gcgcaggttg ccgttgtcat taattacctc gccctggcag ttctgaaacc ccggcagttg
     2401 cgtattcacc aaagcaccgt tggccgcctg gcaggtggcc accagcgtgt ctccattcac
     2461 agacacgttg ttgcaggtct gaagatagga accttgcgga agtccctggg catgcgctgc
     2521 ggttccccag gcagcgaaca tacagatccc aaacatgatg agcactaa
//
LOCUS       DASQYP010000243         2080 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_199793, whole genome shotgun sequence.
ACCESSION   DASQYP010000243 DASQYP010000000
VERSION     DASQYP010000243.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 2080)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2080)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2080
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_199793"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            458..898
                     /locus_tag="VE783_07900"
     CDS             458..898
                     /locus_tag="VE783_07900"
                     /inference="COORDINATES: protein motif:HMM:NF042861.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="antitoxin Xre-like helix-turn-helix
                     domain-containing protein"
                     /protein_id="HYX53361.1"
                     /translation="MHMALLQQPLAGFSTGRAPDLSNKQVQERLSRSAIPAFFKLTEA
                     WQVRDEAARQLLGGVSNGVYYQLKRGQKKTLDQDQLTRISLLLGIFKALNILYSRKLA
                     DTWISLPNSNPMFEGEAPLAYVIRGGVPALVRVRQLLDARRGGR"
     gene            complement(1012..1218)
                     /locus_tag="VE783_07905"
     CDS             complement(1012..1218)
                     /locus_tag="VE783_07905"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53362.1"
                     /translation="MSRLQLKCGVPRSSLWSIEATAGRVGVGKCGIYDGRICHAEEEF
                     MDADTRKKVRFPEQPVVRGAIELK"
     gene            1866..>2080
                     /locus_tag="VE783_07910"
     CDS             1866..>2080
                     /locus_tag="VE783_07910"
                     /inference="COORDINATES: protein motif:HMM:NF012651.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003697 - single-stranded DNA binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded DNA-binding protein"
                     /protein_id="HYX53363.1"
                     /translation="MFQNRISLIGFTGTDAQVRTTKNNRTFVVLALATKRTWRDKQTG
                     ERVSRTEWHRAIAWGKLGDFARTVAKGS"
BASE COUNT          430 a          650 c          565 g          435 t
ORIGIN      
        1 agcgacagca gccgccacag tggtcctcag ccccaacgct gcctgtaaag tctcaaagcg
       61 agcggaaaac tgataattcc cgcccgccag aatgcagggg cataactgct tgcatttcac
      121 ggccggttag ccgtagatcg aggtgcggtt cttagctcgc cgctttgagc tttttctcgt
      181 ctatcctgtg tgcatggcaa agaagatgcc gcagactgat tttccgtgcg atccggactg
      241 tcttggaagt gccagacttc gcactcacgt ttctgtggcc ggaaggccgg cagtagcttc
      301 cggagcgggt tgctctctga cctgctgcgc cgtattgtca cttccgactt agcaacgtca
      361 catgtgacat gtaccgcata atcaatcgat tacgcggaac caagattgtt ctcgatttcc
      421 tccataaatg gacttatact tctccataaa tggagtgatg cacatggcgc ttctacaaca
      481 gccgctagct ggtttctcaa caggcagggc tcctgatctc tcgaataagc aggtacagga
      541 acgcctcagc cgctccgcga tacccgcttt cttcaaactg acggaggcct ggcaggtgcg
      601 cgacgaagca gctcggcagc ttctgggggg tgtgtccaat ggtgtctact accagttgaa
      661 gcgcggccag aaaaagactc tcgatcaaga tcaactaacg cgaatctctt tgcttctcgg
      721 cattttcaaa gctctcaaca tcctgtacag ccgcaagctc gcagatacct ggattagcct
      781 tcccaactca aaccccatgt ttgaaggcga ggcccccctg gcctacgtga ttcgaggcgg
      841 cgtgccggcg ctggtgcgcg tccgacaact tctcgacgcg cgccggggcg gtcgttgact
      901 ccaagaacca catatctcag gcaggacgac acacacaggc tcattccgtc ccgctacagc
      961 gaccaaagcg tcttagcgcg cctcgcgaag ggtgagcatg acctccagga tctatttgag
     1021 ctcgatggcg ccacgaacga caggttgctc ggggaagcga accttcttcc gggtatcagc
     1081 gtccatgaac tcctcttcgg cgtggcatat gcgcccatcg taaatgccgc atttacccac
     1141 ccccacccgg ccggcagtcg cttcaatgga ccagagagag gagcgtggta cgccgcattt
     1201 gagctgcaaa cggctcatgc agagatcgcc tttcacaagg cagaggaatt gcgggagatc
     1261 aaatgggcgg aaccagagac gttcacattc actgactact tggcagactt ccgggccgac
     1321 tttcacgaca ttagaggcga caacagcttt tcggattgcc tgagcccaac cagctacagc
     1381 agctcgcagc gagcggccag agacttgttg gccctgggat ccgcaggcat tgtgtatccg
     1441 agcgtacgcc acgcaggcgg tacatgccta gtttgctttc gaccggccct cgtcaccaac
     1501 gtgcggcagg gccagaacgt tgccgtcgca ttgcgggagc ctggcgtgcc acccgtcatc
     1561 acgtgaacga ccaagctccg ttgtgctcca ttcgttctgg cagcggcctt gtcgcccgtt
     1621 tcttcgacgg ccctggcctg ttctgacctt cgttccccgc ttcctgcccc ttatctcccg
     1681 ggcaccgctt cgggccattt cctgcgcccc ggggactgcg cggctctgct ctttcggact
     1741 ccttccccaa agcaagtttg ggtccccttc ccaaaatgcg ccgctggcct tgggagcagg
     1801 gtccactcgc gaaccttcgg tcagtgtgcc ccgagagaac ggggacatca aacggaggaa
     1861 ctcaaatgtt tcagaacaga atcagcttga tcggtttcac cggaacggac gcccaagtcc
     1921 gcaccaccaa gaacaaccga actttcgtcg tgctggcact tgccactaag cgcacctggc
     1981 gcgacaagca gacgggcgag cgtgtctcgc gcaccgaatg gcatcgcgcc atcgcctggg
     2041 gcaagctcgg cgacttcgcc aggaccgtgg cgaagggctc
//
LOCUS       DASQYP010000244         2107 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_137045, whole genome shotgun sequence.
ACCESSION   DASQYP010000244 DASQYP010000000
VERSION     DASQYP010000244.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 2107)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2107)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2107
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_137045"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1475)
                     /locus_tag="VE783_07915"
     CDS             complement(<1..1475)
                     /locus_tag="VE783_07915"
                     /inference="COORDINATES: protein motif:HMM:NF014868.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53364.1"
                     /translation="MADLKNQTTPQAANQTSAVQSSAPSQQQSQMKTAPGLKFGRYFT
                     RAGVSPYSEVEWELRTASITDAKGNSIFEQKEVESPKDWSMTAINIVASKYLHGQIGT
                     PERESGVRALIQRVAETIRDWGFAQGYFATADDRDVFHDELVHILLQQKASFNSPVWF
                     NVGCDRMEPNSDAQNWHWVSEQGTVAFTTTGYKNPQCSACFINSVKDSLDSILTLAKT
                     EGMLFKWGSGTGTNLSPIRGSHEDLSGGGTASGPLSFMKGFDAFAGVIKSGGKTRRAA
                     KMVILNVDHPDIVDFIECKAKEEAKAWALVEAGYDGSGPDSEAYSSIFFQNANNSVRV
                     TDDFMNSAERDETFFTRAVKDGHPIQGIKARELLRKIAEATWQCGDPGMQYDTTVNKW
                     HTSKNTARINASNPCSEYMFLDDSACNLSSLNLMKFLRASGEFDVPAYRHAVDIMITA
                     QEILVDNAGYPTEAIARNSHDYRPLGLGYANLGALLMASGLP"
     gene            complement(1706..>2107)
                     /locus_tag="VE783_07920"
     CDS             complement(1706..>2107)
                     /locus_tag="VE783_07920"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53365.1"
                     /translation="FRCTSSFDLALVPNQSGVFALAEEITPAGDTNAPRILAVFEVNE
                     ADDLAYSMSRQFASSSEWRQKLEECVCFARYAVVTDEDSRLAAASALRQWLDSKRTRA
                     SHIFERVDPMPEKTVAERAVDRVMQATAAGL"
BASE COUNT          363 a          624 c          658 g          462 t
ORIGIN      
        1 ggcaggccgc tggccatgag cagcgcgccc aggttggcat agccaaggcc cagcggacga
       61 tagtcatgcg agttgcgcgc gatcgcttcc gtcggatagc cggcgttgtc gacgaggatt
      121 tcctgcgccg tgatcatgat gtccacggcg tggcgatagg caggcacatc aaactcgccg
      181 ctggcgcgga ggaacttcat caggttcagc gacgagaggt tgcaggccga atcatcaagg
      241 aacatgtact cgctgcacgg attgctggcg ttgatgcggg ccgtgttctt ggaggtatgc
      301 cacttgttca cggtggtgtc gtactgcatg cccgggtcgc cgcactgcca tgtggcttcg
      361 gcgatcttgc gcagcagctc gcgcgccttg atgccctgga tggggtggcc gtcttttacc
      421 gcgcgggtga agaaggtttc gtcgcgctcg gctgagttca tgaagtcgtc ggtcacgcgc
      481 acggagttgt tggcgttctg gaagaagatg gagctgtagg cctcgctgtc cgggccggag
      541 ccgtcatagc cggcctccac cagcgcccac gctttggctt cttccttggc cttgcactcg
      601 atgaagtcca cgatgtccgg atggtccaca ttgaggatga ccatcttggc cgcgcggcgc
      661 gtcttgccgc cggacttgat cacgccggca aaggcgtcaa agcccttcat gaagctcaag
      721 gggccgctgg ccgtgccgcc gccgctcagg tcttcatggg agccgcggat cggagacaag
      781 ttggtgccgg tgccgctgcc ccacttgaag agcatgcctt cggtcttggc cagcgtgagg
      841 atggagtcga gcgaatcctt caccgaattg atgaagcagg ccgagcactg cggatttttg
      901 tagccggtgg tggtgaaggc aacggtgccc tgttctgaaa cccagtgcca gttctgggcg
      961 tcagagtttg gttccatgcg gtcgcagccc acgttgaacc acaccggcga gttgaagctg
     1021 gctttctgct ggagaaggat gtggaccagt tcgtcatgaa agacgtcgcg atcgtcggcg
     1081 gtggcaaagt agccctgggc aaagccccag tcgcggattg tctctgccac gcgctggatc
     1141 agcgcgcgca cgccgctctc gcgctccggc gtgccgatct gcccatgcag gtacttgctg
     1201 gccacaatat tgatggccgt catggaccag tccttgggcg actcgacttc cttctgctcg
     1261 aagatggagt tgcccttggc atccgtgatg gacgccgtgc gcagctccca ctcaacttcg
     1321 ctgtacgggc ttacgcctgc gcgcgtgaag tagcgcccga acttcagtcc cggcgcggtc
     1381 ttcatctgcg actgctgctg gctgggggcc gaactttgaa ctgcggacgt ttgatttgcg
     1441 gcttgggggg tggtttggtt cttcagatcc gccatgcttc cttctccaca aaacttgaat
     1501 gcttcttgct cagtgctgcc caatgttcgt acttcccaac gcccttcagg agcgcaaaat
     1561 atcgctgcgc tggcaggcgc gccgtcaact cctgaggacg ttgtttttga atttgaaaag
     1621 atcgagggtt gttaaccgct caatgattac tgatatttgt tatggccggc gcaagattcc
     1681 ctatccgatc tcgcgacggc ctgccttaaa gtccggcggc tgtcgcctgc atcacgcgat
     1741 ccacggcgcg ctccgccaca gtcttctccg gcatggggtc cacgcgttca aagatatggc
     1801 tggcgcgagt gcgcttggag tcaagccatt gccggagcgc gctggctgcc gcaagccgcg
     1861 aatcttcgtc tgtgaccacg gcgtaacgcg caaagcagac gcattcctcc agcttctgcc
     1921 gccattcgct gctggaggca aactgcctgc tcatgctgta ggcaagatcg tcagcttcat
     1981 tcacctcaaa caccgccagg attcggggcg cgttcgtgtc gccggcaggg gtgatttcct
     2041 ccgccagcgc gaatacgccc gactggttcg gcaccagcgc cagatcgaaa ctggatgtgc
     2101 accggaa
//
LOCUS       DASQYP010000245         8541 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_243678, whole genome shotgun sequence.
ACCESSION   DASQYP010000245 DASQYP010000000
VERSION     DASQYP010000245.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 8541)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8541)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8541
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_243678"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(306..869)
                     /locus_tag="VE783_07925"
     CDS             complement(306..869)
                     /locus_tag="VE783_07925"
                     /EC_number="3.2.2.-"
                     /inference="COORDINATES: protein motif:HMM:NF015146.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0008263 - pyrimidine-specific mismatch
                     base pair DNA N-glycosylase activity [Evidence IEA];
                     GO_process: GO:0006285 - base-excision repair, AP site
                     formation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="mismatch-specific DNA-glycosylase"
                     /protein_id="HYX53366.1"
                     /translation="MPRADFETLPDYLRPGLDLVFIGINPGLYSVRRGHYFARATSRF
                     WPAFSKSKLSAQMRREMKVDYLLPEHDSQLPAFGIGLTDVVKRPSANASELTRADFAT
                     WVPVLLRKLHRYKPRVACFHGLTAYRPFHAFTHKSAARPFLGAQPEQIGSTHLFVVPN
                     PSPANAHFTPADQTAWYDRLADFIHEL"
     gene            complement(1008..1083)
                     /locus_tag="VE783_07930"
     tRNA            complement(1008..1083)
                     /locus_tag="VE783_07930"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(1048..1050),aa:Thr,seq:cgt)
     gene            complement(1498..3411)
                     /gene="acs"
                     /locus_tag="VE783_07935"
     CDS             complement(1498..3411)
                     /gene="acs"
                     /locus_tag="VE783_07935"
                     /EC_number="6.2.1.1"
                     /inference="COORDINATES: protein motif:HMM:NF001208.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003987 - acetate-CoA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0019427 - acetyl-CoA biosynthetic process
                     from acetate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetate--CoA ligase"
                     /protein_id="HYX53367.1"
                     /translation="MATVAQPQGGIEQLLKAEVELHPPAFLKEQARLKDYAAEYKKSV
                     EDPDAFWADVAKELEWFQPWNKVFEWKYPTFQWFIGGKCNITYNALDRQIKVGRKNKV
                     AYTWVAEDGGEQQVTYGQLLDFVSRTANGLKSLGVKKGDRVIIYMPLALEGVVSMLAC
                     ARIGAVHSVVYAGFSVQALRSRIEDAQARVILTADFTVRRGKRVPLRAIVEESIAGLE
                     IVDKVVVLRRGTPQIELSHHEVDFYELIKSQKAECPPEVMDSEDPLYILYTSGTTGKP
                     KGVVHVQGGYMVGTYYHMTRFWDIRDDDVYFCTSDIGWVVGHSYIVYAPLLAGASTVF
                     REGAIDFPHPAVAWEIAEKYRVSVVFTAPTAVRMFMRHGDELPKKYDLRSIRLFTCAG
                     EPLNPEALHWAHRVICDNGKTGFVADNWWQTETGGPCLGTLCTFPQRPAKAGKALPGV
                     IAEITDHEGNKMPPNKGGLLVLRRPFPHMFRTVYGDPQRYAVDWNKVPNGYTTGDVAI
                     CDEDGYFTVVGRADDVLNVAGHRIGTADVEGALVSHPAVAEAAVIGRPDEIKGENIKA
                     FVILRVGHTASPELADKLKDHVRHTLGSIAVPADIAFPDKLPKTRSGKIIRRLLKAQE
                     LGREVGDLSTLEE"
     gene            3633..4073
                     /locus_tag="VE783_07940"
     CDS             3633..4073
                     /locus_tag="VE783_07940"
                     /inference="COORDINATES: protein motif:HMM:NF016107.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase"
                     /protein_id="HYX53368.1"
                     /translation="MHEKYISILATILLIAAAGALFMLNHGLLGNGPVSVTVQMCGIL
                     LVLWARLTFGWRSYHAAANPTRGPLITSGPYHYIRNPIYAAVLLVCWGGIAAHWSVLN
                     ALLGFLIAATLAVKIWCEETLLRAAYPEYRAYEQSTARIIPYIL"
     gene            4285..6144
                     /locus_tag="VE783_07945"
     CDS             4285..6144
                     /locus_tag="VE783_07945"
                     /inference="COORDINATES: protein motif:HMM:NF014598.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbon starvation protein A"
                     /protein_id="HYX53369.1"
                     /translation="MNTFPVLLGALCVYALAYRYYSAFIAAKALALDDRRITPGHQFE
                     DGHNYVPSPKWVLFGHHFAAIAGAGPLVGPTLAAQFGFAPGFLWLLIGAVIAGCVQDF
                     TVLVASVRHKGRSLADIARTEIGPFAGFVAMIAVLFILLVTLAGLGIVVVNALSNSPW
                     GVFTIGMTIPIALIMGVWMFKSGGDKIKVVGPSIFGVVLLIASVIGGNWYAQSGAAGA
                     LTFSAHQITMLMAIYGFVASVLPVWLLLEPRDYLSTYVKLGTIAVLIIGVFVVHPNIQ
                     FPAVTQFVHGGGPIIKGKLFPFLFVTIACGAISGFHSLVSSGTTPKMLDKETDARFIG
                     YGAMIAESLVGVLALIAACSMYPGDYFAINSTPEVFSKLGLHTVNLDMFSREVGEKLA
                     GRTGGAVSLAVGMAQIFKGLPGMAKLMGYWYHYAIMFEALFILTTIDTGTRVARYVLQ
                     ELMGKAYKPFGNNAWLPGNLATTFVVVLAWGYLIYTGNISTLWPLFGTGNQLLATIAL
                     AVTTTFLINMGKQKYAWITAIPMAFVGVTTVTAGVLAIKNIFWPLTLSGKAQQVFTGY
                     LDSILMSIFIAGVILVLFDAVRRWFAVLNGAPVPQEAFGPPLTATGDVKMGCC"
     gene            complement(6656..7534)
                     /locus_tag="VE783_07950"
     CDS             complement(6656..7534)
                     /locus_tag="VE783_07950"
                     /inference="COORDINATES: protein motif:HMM:NF024816.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HYX53370.1"
                     /translation="MERYQREDVLRILRITARQLTGWEKAGLFPIRDAYSFFDLLQIK
                     KLRDLRAKRVRSAVIRDSLRAMQQQVAGMENPLLEAGTFTSRSRVVFRHQGAAVEPLA
                     GQFVLDFEDRAVQEVESPKIHAMRTAESAADYFSRGVSLEEDPKSQEQAIESYKKCVE
                     LDPTHAAAYINLGTLYYNRHDFALAERYYRKAVEVDPRYALAYFDLGNVLDETGRLDE
                     AIRCYQAAISLAPTYADAHYNLALALEKARQPRKALTHWQCYARLDTTGPWAIHARNQ
                     IKKILAGDTLKLVKKK"
     gene            7955..>8541
                     /locus_tag="VE783_07955"
     CDS             7955..>8541
                     /locus_tag="VE783_07955"
                     /inference="COORDINATES: protein motif:HMM:NF013740.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HYX53371.1"
                     /translation="MKNHRSDILFFFGVSLALWIAYSVRDVLLLIYVSALFAVVLSPA
                     IAAIQKLRLGGWRPGRGFAIIFLFLLLVLLGTVFMVFAFPPIYRDAHQFSADWPRHLA
                     DLSEELHHLPFGSKVDPVALEKYATEIVGGAGGLFINLAGGIFGLFTAIILTAYFTID
                     GDRTFNWVVSLFPLNQQERLGRTLRRAEERMRNWL"
BASE COUNT         1722 a         2514 c         2453 g         1852 t
ORIGIN      
        1 ttgagcagtg cagggtagag cgtgccgtag ttgacctgaa gctggtctcc gctggtctgc
       61 tcaatccggc gggcaatgcc ataaccgtgc tgcgggccca tggcctcaag cgtcttcagg
      121 atcatcagag ccagtgtgcc ctgccacact tctgttttgt tgcccatagt ggaacgcggc
      181 tcctctggta atgccatagg agtatgcatc agttcctatg ggaaaacaag agaaacggta
      241 cggaagctta gacgggagtg gacgcaggcg gttagcgcac gtgtgctctt ccaccagacc
      301 gtcgctcaaa gttcatgaat aaaatccgca aggcggtcat accacgccgt ctggtcagcg
      361 ggtgtaaagt gcgcgttcgc agggcttggg ttgggcacaa caaagaggtg cgtggaacca
      421 atttgttcgg gctgcgcgcc gaggaatggc cgggcggcgg atttgtgagt gaacgcatga
      481 aatggccgat aggcggtgag accgtgaaag caggcaacgc gcggcttgta gcgatggagt
      541 ttcctgagca gaactgggac ccaggtggcg aagtcagctc gcgtgagttc ggaagcatta
      601 gctgacggtc gcttcaccac gtcagtgagt ccgatgccga aagctggcag ctgcgaatca
      661 tgttcgggaa gaaggtaatc gactttcatc tcacgccgca tttgcgcgct cagcttcgat
      721 ttggaaaatg ccggccagaa gcggctggta gcgcgggcaa agtaatgtcc gcggcggacc
      781 gagtataggc cgggattgat gccgatgaag acgaggtcca gaccgggacg aagatagtcg
      841 gggagggttt cgaaatcggc gcgcggcatt ttggaatctt accgtagaat tctcacccca
      901 agtcgcaagg gcgaggccgg gtaccgccga gcccgctgca acagggcaga ctcacttaaa
      961 acgggaattg aattctgaag cggtttggag cgaagcgaca aaaaggatgg agccgacgat
     1021 cggacttgaa ccgatgacct gtcgattacg aatcgactgc tctaccaact gagctacgtc
     1081 ggcctgaatt ctattttagg agacatcaga agaagcgtaa agccaggtat ttggctgagc
     1141 aagccgcgcg caacgagagg aaataaaggg gctccgtgcg gcgttcgata ctccgctggg
     1201 gagcaagcgc ggcggccgga gcccttccgc tgcaatcccg ccaaaagata aggttcagca
     1261 gaagggcagc gctgacattc tctccctgac tgtaaaaggg tggaagcgcc gataagcgtc
     1321 attaagcgct agggagcgta atgaaggtgc actttgaagt caaggcgcct ggaacaaacg
     1381 acgccagaac tgcctacctg cgggtgcgct gccaatcgga gttttctcac ccaaaatggc
     1441 aggggccaca gctaccagac tgtggcccct ttcgggagtg cccggggaag taagcgctta
     1501 ctcttccagg gttgaaagat cgccgacttc gcggccaagt tcctgcgcct ttagcagacg
     1561 ccgtatgatc tttccactcc gagtcttggg aagtttgtca ggaaaggcga tgtccgcggg
     1621 aacggcaatc gaacccagag tatggcgaac gtggtctttc aatttgtccg ccagttccgg
     1681 cgaagccgtg tgcccgacgc gcagaatcac aaacgccttg atgttctcgc ctttgatctc
     1741 atccggacgg ccgattaccg cagcttccgc caccgcggga tggctgacca gcgcgccttc
     1801 cacgtccgcg gttccaatgc ggtggccggc gacgttcagc acatcatcgg cgcggcccac
     1861 cacggtgaag taaccatctt catcgcagat tgccacgtct ccggtggtgt agccgttggg
     1921 caccttgttc cagtccaccg cgtaacgctg cggatcgcca taaacggtac ggaacatgtg
     1981 cgggaaagga cggcgcagca ccagcagtcc gcccttgttg ggcggcatct tgttgccttc
     2041 atggtccgtg atctccgcga tcacgccggg cagcgccttg cctgccttgg caggacgctg
     2101 cgggaatgtg cacagcgtgc caaggcacgg cccgccggtt tcagtctgcc accagttatc
     2161 tgcaacgaag ccggtcttgc cgttgtcgca gatcacgcga tgtgcccagt gtagtgcttc
     2221 cgggttcagt ggctcgcccg cgcaggtgaa aaggcggatg ctgcgcaggt catatttctt
     2281 tggcagctcg tcaccgtggc gcatgaacat acgcacggca gtgggagcgg tgaagacgac
     2341 cgagacgcga tatttttcgg caatctccca ggcgacggcg ggatgcggga agtcaatggc
     2401 gccctcgcgg aatacggtac tggccccggc gagcagcgga gcatagacga tatatgaatg
     2461 tcccactacc cagccgatat ccgaggtgca gaaataaaca tcgtcatcgc ggatatccca
     2521 gaaacgagtc atatggtagt aagtaccaac catgtaaccg ccctgcacgt ggactacgcc
     2581 tttgggcttg ccggtggtgc cgctcgtata aagaatgtag agcggatctt ctgagtccat
     2641 gacttccggc gggcactctg ccttctggct cttgatcaat tcataaaaat ccacttcatg
     2701 atggctcagt tcgatttgcg gtgtgccgcg gcggaggacc acaactttgt ccacgatttc
     2761 aagtcctgca atggactctt ccacaatggc gcgcaatgga acacgtttac cgcggcgaac
     2821 ggtgaagtca gccgtgagga tcacgcgtgc ctgggcatct tcaatgcggc tgcggagcgc
     2881 ctgcacgctg aatccggcat agaccacgga gtgaacggcc ccgatgcgcg cgcaggccag
     2941 catggagacc accccttcca gcgccagtgg catataaata atgacgcggt cgcccttctt
     3001 cacgcccagc gacttgagcc cgttcgcagt acgggagacg aagtcgagca gttggccgta
     3061 ggtgacctgc tgctcaccgc catcctctgc cacccatgtg taagcaactt tgttcttgcg
     3121 gccgactttg atctggcggt cgagcgcgtt ataggtgatg ttgcatttcc caccgatgaa
     3181 ccactgaaac gtcggatact tccattcgaa aactttgttc cagggctgga accactcgag
     3241 ctctttggcg acgtcggccc agaaggcgtc agggtcttcg accgacttct tgtactcggc
     3301 cgcgtaatct ttgagacgcg cctgctcttt cagaaaagcc ggcggatgta actcaacttc
     3361 ggctttcagg agctgctcaa ttccgccttg tggttgggcg actgtcgcca taaatgcctc
     3421 ctaaggattg gtgggttcgc ttgtgctggt acgcgcggga aaccggctga cgtgagtcac
     3481 ggctgggcag ggtgagagcc ggcatccatc gggtccacag cctatgaccg gggatgataa
     3541 cactttcaac cagagccgat gtgacaacgg tcacaggtgc ttcaggtgca tgggataaga
     3601 ttcgcataag ctcaatgtga acgaaggcct gaatgcacga gaagtacatc tcaattctgg
     3661 caacgattct gcttatcgca gccgcggggg cgctgttcat gctcaaccat ggactgctcg
     3721 gaaatggacc cgtgagtgtc acagttcaga tgtgcgggat cctgttggtc ctctgggcgc
     3781 gattgacgtt cggatggcgc agctaccacg cggcggcgaa tcccacacgc ggacctttga
     3841 tcacatccgg cccgtaccat tacatccgca accctattta tgcggctgtg ctgttggtgt
     3901 gctggggcgg gatcgccgcc cactggtccg tgctgaatgc gctgctaggg ttcctgatcg
     3961 cggcaactct ggccgtgaag atctggtgtg aagagacgct gttgcgcgct gcttaccctg
     4021 agtatcgcgc atatgagcag agcaccgcgc gaataatccc ttacattctt taggcccgtc
     4081 tggcgcccga ccgaggcaac gtggctgtac tcaagccggc atcgaagatc agaacaaccg
     4141 gccagagggg tgatttagct cacggctttt tgctgagtct ctggaggaga attcgctagc
     4201 atcgcaaaat ccgtagtttg agtgctctgt tcagcaacca ggctcaaacc ataacgccac
     4261 aggagcactt ctgaggagcg gagaatgaat acttttcctg tccttctggg cgcgctttgt
     4321 gtctacgcgc tcgcatatcg ttattacagt gcattcatcg ccgcaaaggc actggctctt
     4381 gatgaccggc gtatcacgcc aggccaccag tttgaagacg ggcacaacta cgtgccttca
     4441 cccaagtggg tattgttcgg gcaccatttc gcggcgattg ccggagccgg tccgctggtg
     4501 gggcccacgc tggcagcgca gttcggcttc gcgcctggct ttctctggct gctgatcggc
     4561 gccgtgatcg ccggctgcgt gcaggacttc acggtgttgg ttgcgtcagt gcggcacaag
     4621 ggccgctcct tggccgatat tgcccgcacg gagattggcc catttgccgg ctttgttgcc
     4681 atgatcgcgg tgctcttcat tcttctggtc acgctcgccg gactcggcat tgttgtggtg
     4741 aacgcgctca gcaattcacc gtggggcgtt ttcaccatcg gcatgaccat tcctatcgcg
     4801 ctgatcatgg gcgtgtggat gttcaagtcc ggcggcgaca aaataaaagt ggttggcccc
     4861 agcattttcg gagtggtgct gttgatcgcc agcgtcatcg gcggcaactg gtacgctcag
     4921 agcggagcgg caggcgcgct gaccttcagc gcccaccaga tcaccatgct catggcgatc
     4981 tacggattcg tagcctccgt cctgccggtt tggctgctgc tagagcctcg cgactatctc
     5041 tccacatacg tgaagctggg caccatagcg gtcctgatca tcggcgtgtt tgtggttcac
     5101 ccgaacatcc agttcccggc ggtaacgcaa ttcgtccacg ggggcgggcc catcatcaaa
     5161 ggaaagctct ttccgttcct ctttgtcaca attgcctgcg gcgcgatatc cggcttccac
     5221 tcgctggtat cttccggcac cacgccaaag atgctggaca aggaaaccga cgcgcgcttc
     5281 atcggctacg gcgccatgat cgccgagtct ctcgtcggcg ttctcgcgct gatcgccgct
     5341 tgctccatgt atccgggcga ttactttgcc atcaacagca ctccggaagt tttctccaaa
     5401 ctcgggctgc acaccgtgaa cctggacatg ttctcgcgcg aagtcggaga gaagcttgcc
     5461 ggacgcaccg gtggcgccgt ctcactcgcc gtgggcatgg cgcaaatctt caaaggcctg
     5521 cccggcatgg ccaagctgat gggctactgg taccactacg ccatcatgtt tgaggccttg
     5581 ttcattctca ccaccattga caccggaacc cgcgtcgccc gttacgtgtt gcaggaactt
     5641 atgggcaagg cctacaagcc gttcggcaac aatgcctggc ttcccggcaa cctcgctact
     5701 accttcgtgg tggtactagc ctggggatac ctgatctaca ccggcaacat ctctaccttg
     5761 tggccgctgt tcggaacagg gaaccagcta ttggcgacca tcgctctagc cgtgactacg
     5821 acgttcctca tcaacatggg caagcagaag tacgcatgga tcacggccat tcccatggct
     5881 ttcgttggcg tgaccaccgt gaccgcaggc gtgctggcca tcaagaacat tttctggccg
     5941 ctcacgcttt caggaaaagc gcagcaggtc ttcaccggct acctcgattc catcctgatg
     6001 tccatcttca tcgccggcgt gatcctggtg ctgtttgacg ccgtgcgacg ctggttcgcg
     6061 gtactcaacg gcgctcccgt gccgcaggag gcgtttggtc ctccactcac cgccaccggc
     6121 gacgtgaaga tgggttgctg ctaaaaaaca gctactagct tctggctgct agctcgattc
     6181 gctgacgggg ctgccgaaac ggtgccccgt ttcttttatg aatgcagtgc gcaaaatatt
     6241 cagttgttaa agatcgtttc ccgaaaccgg gtgcctcctg agaagcattc tcgtcgtggc
     6301 cgacctcaaa cgccaccggg agccacaaag gtctgtcact cgcgaagtcc cgagcgccgt
     6361 aggcgcgacg tgagcgtagc ccctggtaaa ggcgcgcagc gccggaaccg ggggaacagt
     6421 tacgaaaaag tacttcctta cgcctgtggc cgtccgcgca gcgcagcgaa gcgaccagaa
     6481 acaaaccgaa gagaccagga acgaagcgaa gcggagcgca aaaaactttt tatgcagggt
     6541 tgggaactct cgcttcatcg cgacttcgct gcacaaagga aaggtgcctt ccttaaacgg
     6601 cataacggcc gcagttcact tccggcgatc ctggaaatcg tggcaattgt ggaacttatt
     6661 tcttctttac cagcttgagc gtatcgcccg ccagaatctt cttgatttga tttctggcat
     6721 ggatggccca cggcccagtg gtgtccagtc tggcgtagca ttgccaatgc gtaagcgcct
     6781 tccgtggctg acgggctttt tccagcgcca gcgccaggtt gtagtgtgcg tcggcgtacg
     6841 tgggagccag tgagatcgcc gcctggtagc agcgaatggc ctcatctaat cttcccgttt
     6901 cgtccagcac gttgcccaga tcgaaatagg ccagcgcgta gcgtggatca acttccaccg
     6961 ccttgcggta atagcgctct gccagcgcaa aatcgtggcg attgtaataa agcgtgccca
     7021 ggttgatgta ggcagccgcg tgcgtcgggt cgagctctac gcacttcttg tacgattcaa
     7081 ttgcctgttc ctggctcttc ggatcttctt ccagcgagac gccccgcgag aaatagtcgg
     7141 cagcagactc agccgttcgc atggcatgaa tcttgggtga ctccacttcc tgcaccgcgc
     7201 gatcttcaaa gtccagcacg aactggccgg ccagcggctc aaccgctgcg ccctgatgcc
     7261 ggaacaccac gcgtgagcgc gaagtaaacg tgcccgcctc cagtagcgga ttctccatgc
     7321 ccgcaacctg ctgctgcatc gcccgcagtg aatcgcggat caccgcggac cgcacccgct
     7381 tggcgcgcaa gtcacgcagc tttttaatct gcagcagatc gaagaaggag taggcgtcgc
     7441 gaatcgggaa cagcccggct ttttcccagc ctgtgagctg ccgggcggtg attcgaagga
     7501 ttcttagaac gtcctcgcgc tggtagcgtt ccactgtgcc cttgaaagcc tgtttggtat
     7561 ctctaacaga tacaagggga ttatggccgc agaacgaata aaaaggcaag cccgtggaac
     7621 aattttgatg tggaaatctg gacacagtat ctccctcgat acccttaacc aggttctaag
     7681 ccactcctgt cggcatcgtt cgaactccaa actcaaccgg gtggtgcagg cctcaggcct
     7741 gcggttaaag gccgcacgat tgtcggcttt agccgctgag gtatggattg ctgattcatg
     7801 catcaaacca gctctttccg attccgcgcg atttcggcga tcacgacgat tccgcgcgat
     7861 ctccctctcc gctctcaggc aaattccctg cggttttact actttcggca gcatcgtctc
     7921 agcagccgct cgcgctacac tcaattcacc ggccatgaaa aaccaccgtt ctgacattct
     7981 tttcttcttc ggcgtctcgc tcgcgctctg gatcgcctac tccgtacgcg acgtcctgct
     8041 ccttatctat gtcagcgcgc tgtttgccgt cgtcctctcg ccggccatcg ccgccatcca
     8101 gaagctgcgt cttggcggct ggcgtcccgg ccgcggcttc gccatcatct ttctttttct
     8161 gctgctcgtg ctcctcggga cggttttcat ggtcttcgcc ttcccgccca tctatcgcga
     8221 cgcccaccag ttctccgccg actggccccg ccacctcgcc gacctcagcg aagagctcca
     8281 ccacctgccc ttcggaagca aagttgaccc ggtggcgctg gaaaaatacg ccacagaaat
     8341 cgttggcggc gccggcggcc tcttcatcaa cctggcgggc ggaatcttcg gcctcttcac
     8401 cgccatcatc cttaccgcct acttcaccat tgacggcgac cgcaccttca actgggtggt
     8461 ctcgctattt ccgctcaacc agcaggagcg actcggccgc actctgcgcc gtgcggaaga
     8521 gcgcatgcgc aactggctca t
//
LOCUS       DASQYP010000246         2423 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_117720, whole genome shotgun sequence.
ACCESSION   DASQYP010000246 DASQYP010000000
VERSION     DASQYP010000246.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 2423)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2423)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2423
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_117720"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..276
                     /locus_tag="VE783_07960"
     CDS             <1..276
                     /locus_tag="VE783_07960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611591.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ISAs1 family transposase"
                     /protein_id="HYX53372.1"
                     /translation="SNLRPEAARLNSAIRQHWGIENKLHWTLDVAFREDASRKRAGNA
                     AQNFSRITRIALNLLKQNKTSKLGMKGKRLKAGWDNGYLLHLLGIEV"
     gene            complement(415..1131)
                     /gene="cmk"
                     /locus_tag="VE783_07965"
     CDS             complement(415..1131)
                     /gene="cmk"
                     /locus_tag="VE783_07965"
                     /EC_number="2.7.4.25"
                     /inference="COORDINATES: protein motif:HMM:TIGR00017.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004127 - cytidylate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0015949 - nucleobase-containing small
                     molecule interconversion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(d)CMP kinase"
                     /protein_id="HYX53373.1"
                     /translation="MNDGMPAGENSGRGARKLVIAIDGPAGSGKSTLAALLARKYGYT
                     NIETGAMYRALAFKALESGVSLDDGNKLAALAKQSRIELTPNPEGNRVLLDGNDVTEC
                     LRSQEVTDAASKVSVHPAVREWMVAAQRKIGEGGGIVMEGRDIGTKVFPDAEVKIFLD
                     AAPEIRGTRRFQQSPASAAHEASVVAELQARDQRDRTRANSPLAPARDAVLIDSTYLT
                     LDQVLARAVEVIDSRLARSQ"
     gene            complement(1128..1991)
                     /locus_tag="VE783_07970"
     CDS             complement(1128..1991)
                     /locus_tag="VE783_07970"
                     /inference="COORDINATES: protein motif:HMM:NF017984.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0019104 - DNA N-glycosylase activity
                     [Evidence IEA];
                     GO_process: GO:0036297 - interstrand cross-link repair
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="crosslink repair DNA glycosylase YcaQ family
                     protein"
                     /protein_id="HYX53374.1"
                     /translation="MTEQELEQQRAANWRIDGNAVHTVEEARKFVEAVGFCLMYPERT
                     LPLVPSFMAAYAGSAAGLPAAKNAFADPRAQQATELMVRLLRERSAFEMILFGEATLV
                     VSAAAFPFFYGLVGDRTPKLPPKTKAQGAKVSELSARVFEALQKHGPLSKTQLQEHVG
                     RETSQAALDRALAELWSILKITRVDYNASAGAFWDVLYRWAPEPVKEGINISEPEAIS
                     ALVSKYLETAVAVEQEDIEQFFSHMTSRSKVREAVGALMQARELSLVTIGAKGLIRLA
                     PQPDQQRRRNA"
BASE COUNT          487 a          818 c          606 g          512 t
ORIGIN      
        1 tccaacctgc gccccgaggc ggcccggctc aactcggcca tccgccaaca ctggggcatc
       61 gaaaataaac tgcactggac actcgacgtg gctttccgcg aagacgccag ccgcaaacgc
      121 gccggtaacg cagcccaaaa cttctcccgc attacccgaa tcgctctcaa cttgctcaaa
      181 cagaacaaaa cttccaagct cggcatgaaa ggcaaacgcc tcaaagctgg ttgggacaat
      241 ggctacctgc tccacctact cggtatcgaa gtttgatgcg tcggccctgc ttgatggggc
      301 agagaagccc tcgcctgcga agtttgttgg tttatactaa tttaatctta aaatcgctcc
      361 agttacagtg ttccacgcca gccggaggca ggcatttatg cctgagcttt caaattactg
      421 gctgcgcgca agcctcgaat cgattacctc aaccgctcgc gccagcacct ggtccagcgt
      481 gagataagtg gagtcgatca gcactgcgtc ccgcgccggc gccagcggcg agttcgcgcg
      541 ggtgcggtca cgttggtctc gcgcctgcaa ctccgccacc acagacgctt catgcgcggc
      601 tgaagccggg ctttgctgaa accggcgcgt gccccggatc tccggcgccg catccagaaa
      661 gatttttact tcagcgtcag gaaaaacttt tgtcccaatg tcgcggcctt ccatcacaat
      721 gccgccgccc tcgccaattt tgcgttgcgc cgccaccatc cactcccgca ccgccggatg
      781 gactgacact tttgaagccg catccgtcac ctcctggctc cgcaggcatt ccgtcacgtc
      841 attcccgtcc agcagaacgc gattgccctc tggattcggc gtcagctcaa tccgcgactg
      901 ctttgccaac gccgcaagct tgtttccatc atccagtgaa acgccgctct ccagcgcttt
      961 gaaagccaga gcgcggtaca tcgcccctgt ttcaatgttg gtgtagccgt attttcgagc
     1021 cagcagcgct gccagcgtgc tcttgcccga gccggcaggc ccatcaatgg cgatcacaag
     1081 ttttcttgcg ccccggccgg aattctctcc cgccggcatg ccgtcattca tgcgttgcgt
     1141 ctccgttgct ggtccggctg cggcgccagg cggatcaggc ccttggctcc aatcgtcacc
     1201 aggctcagtt cgcgcgcctg catcagggct cccactgctt cgcgcacctt tgagcgcgac
     1261 gtcatatgag aaaagaattg ctcaatgtcc tcctgttcca cggcgaccgc cgtctccagg
     1321 tacttgctca ccagcgcgga aatcgcctcc ggctcggaaa tattaatgcc ttctttaacc
     1381 ggttccggag cccagcggta aagcacgtcc cagaaagcgc ctgcgctcgc gttgtaatcc
     1441 acacgcgtga tcttcaaaat cgaccacaac tccgccagcg ctcgatccag cgccgcctgg
     1501 ctggtctcgc gccctacatg ctcctgcaat tgcgtcttgc tcagcggccc atgtttttgc
     1561 agcgcttcaa ataccctggc agaaagctcc gacaccttgg cgccctgcgc cttggtcttg
     1621 ggcggcagct tcggtgtacg atcaccgacc agcccataga aaaaaggaaa ggccgcagcc
     1681 gaaaccacca gcgtcgcttc gccgaacagg atcatctcaa acgccgaacg ctcgcgtagc
     1741 agacgcacca tcaactcggt cgcctgctgc gcccggggat cggcaaaggc atttttcgcc
     1801 gccggcaaac ctgctgccga acccgcatat gccgccatga aactgggcac cagcggcagc
     1861 gtgcgctccg gatacatcag gcagaatccc acagcctcaa caaatttgcg cgcttcttcc
     1921 acggtatgga cggcattgcc gtcaatccgc cagttcgccg ccctctgctg ctcgagttct
     1981 tgttcagtca tgttgtaatt gaatgccctg gtttattcgc tttggcccag tcgccttgta
     2041 gcacagtcac cttcaacccg cttcgccttc aagcccgcga aacaatttca atctgtcgtc
     2101 ctgagcgaag cgacgctgcg cagcagggcg tcgcgcagcc gaaggatccc gaggatacat
     2161 cactgtacca tgctgcctca gggagttctc acgacacttc ttcatcaaat taaaggaacg
     2221 gcggggcgtt ggctgttgga ctgcaacatt gtagccgtca aaccttcaaa atcgttgcag
     2281 cgaggctcca gcggatctcc atcagggctc gaagatccgt tcaatgcgcg ccaccacctc
     2341 atcgtggctg acgctctctc cgttgtccaa ttgcgccaat cccttctgca cttccgctcg
     2401 aaaccacttg tcatgatcga gat
//
LOCUS       DASQYP010000247        11546 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_243741, whole genome shotgun sequence.
ACCESSION   DASQYP010000247 DASQYP010000000
VERSION     DASQYP010000247.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 11546)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11546)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11546
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_243741"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2395)
                     /locus_tag="VE783_07975"
     CDS             complement(<1..2395)
                     /locus_tag="VE783_07975"
                     /inference="COORDINATES: protein motif:HMM:NF040127.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6531 domain-containing protein"
                     /protein_id="HYX53375.1"
                     /translation="MSRRFAFTASIVLVCSTLAVAQHSTHSQLDQYVEQVSELSARAR
                     ANVYFTNPQSIFRGVQVSFVNVGDGNLTLQRRDMVVPGRIPLVFARVYDSSGKGSVDF
                     GPGWTLSAAESITVADGKAHLAGENASSIDFVADNAGGFRLERDFPSDYQELTVVDEN
                     VLIAKLRTGFVKRFQRIGDVFRLVQVRDRNGNEVRLTYASGLLSKIENANHSIIILRD
                     KTGRITSAQDDQNRSVQFAFNDKGQLTEAHDLAGRVWSYSYSADEKLHEARDPLNRLN
                     FGASFDQNGQVRRLQLPSGVIQFSFDRSVAVTTVIDRKNLISRFFQNSEGITTRVINP
                     LGEETAITLDNSRNPASILRNGSVLERMEFDDQHRLTARHTSSDSGMVDRQYSYDPAT
                     GQLASIQSSDGKNRSFTYDQNGNIASAVLPDGEHKFQFSPFGALSAISENGLSATFET
                     DADGLFSSMTNDNKAPMRLSYKAGGQLKQAIFPGGFKSTYEYQTSGLRSRIALSNGRG
                     SQYSYDPAGNLTGSKVFDNKGKQVNGQTLEMDDSYQLTKWTLFDGTVTEFKYDPSGNL
                     TEIKKNKSVTRFEYDALNRLTAVVTPDGQRLTYTYKPGERSLIEQHYHAAVLAEDRRD
                     TGFTFASQSQVLATRPISGIIGPVRFSENLGTFQLSGPDGAEILTPEQGPEASLKKMF
                     LFDNAKTADNLRQGFNIPFNNMFIPGEYASINCCPVCFIDGGPRCPPCYEPPTPDPPT
                     ITGPPVVWYFGGATPAGYDTSITLTSSSGAGTNWSTASSKITLSATTGNSITVKSAGT
                     "
     gene            complement(2543..3763)
                     /locus_tag="VE783_07980"
     CDS             complement(2543..3763)
                     /locus_tag="VE783_07980"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53376.1"
                     /translation="MPVKHSVIARLALVILAAASLLLLPISELRAQNAQPAPSTPASW
                     HFIISGDSRNCGDVVMPVIAAHSAAHYQPYFYWHLGDLRAIYKVDEDMAAEARKAGHY
                     LSCESYLKNAWPDFIEHQIAPFGITRFYLGIGNHEIIPPKNLQQFSTEFQDWLLTPRL
                     QMERVEAEQIKSAKSGACWKIASQPYVAAKTYYHWIQGGVDFIYLDNSSMQFPPDELD
                     WFDCVISRASAPDSKVKAVVVGMHEALPYSIANNHSMCDDPTKDTAGCKSGKHVYEAL
                     IQLKTKKNVYVLASHSHFLLADIFRREPQNHRLDGWIVGTAGAVRNDLPPGVQPGPLA
                     QRDVYGYLLGTVKADGKIDFEFVPLKESDVPAGVRERYPHGFTNWCFEHNSEHLDPAD
                     LETTNRCIPAPKPE"
     gene            complement(3989..5080)
                     /locus_tag="VE783_07985"
     CDS             complement(3989..5080)
                     /locus_tag="VE783_07985"
                     /inference="COORDINATES: protein motif:HMM:NF015983.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HYX53377.1"
                     /translation="MKSTFDIAKTPMTVVWEATQSCDPAYCYETGQPERDPLELNTKE
                     AEKMIRDIAELKPPVFIIEGGDPLARNDIFSLICYAGSCGLHPALVLDASFALTRNVI
                     AELKNSGLARLGLRVDGSTAELHDSITRHPKGFEHTRRAMQVANEWRLPLQIHTDLCR
                     HNLNDLENIAALLKQHRVMLWIITFPVPDGKLLPEDVLTAEEFEQAFATIYKISQQVS
                     FKIKTVEAQHYRRFVLQQRSQERADKLWNPAQDSFEANGIPGILPLNEGLATAYISNT
                     GEVYPSACFPLSAGNVRVQPLKDVYREAELFRLFRETRRLTGKCGRCSFHDVCGGSRA
                     RALRAYGDMFQQDSCCAYEPPLRPEPKTV"
     gene            complement(5382..6464)
                     /locus_tag="VE783_07990"
     CDS             complement(5382..6464)
                     /locus_tag="VE783_07990"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53378.1"
                     /translation="MTNHFELQSHPLAAIWETNQRSGPISGEPSPPRPPDLDLNDFEA
                     EQMIREVAKLNPPIFVFAGHDPLRRQGILSLVQYATACHLKPTMLLGPASQLARVNVG
                     ELRRAGLSRIGFVLNGSTAELHEQITGVESSFANTLNGIQYAREGHLPVQVHTTVSRR
                     NLHDLEAIAALLKGLRVMAWHVSFLVPSGPFEMDDVPTADQFELAFARLYVLAQEVNF
                     KIKTVDAPHYRRFVLQERSRHRHDNLVTIDREPQGIPGILPVNESRATLFISSTGEIY
                     PSSTLRLSAGNVRTDDVAEVYRSGALFSSLRETRNLKGKCSLCEFKDVCGGSRARSWA
                     VAGDLFAQDDHCIYQPHVAIRAGCIV"
     gene            complement(6766..7308)
                     /locus_tag="VE783_07995"
     CDS             complement(6766..7308)
                     /locus_tag="VE783_07995"
                     /inference="COORDINATES: protein motif:HMM:NF042461.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6580 family putative transport protein"
                     /protein_id="HYX53379.1"
                     /translation="MMLAYLFVVLAVAIRVLAGTGTFATLGFTPVGASLLFFGARTSG
                     KNLWAPIALLIGSDIFLNYRVYHLPLTWDQMVVWAWYAVPCSLGFLMKDRVKPAYVVA
                     GALSTSVSFFLVSNFAVWLAGYIPYEKSLSGLINCYVQALPFFRTGLESDLAFSILFF
                     GCGALVTHALRGYKAKHATA"
     gene            complement(7367..8428)
                     /locus_tag="VE783_08000"
     CDS             complement(7367..8428)
                     /locus_tag="VE783_08000"
                     /inference="COORDINATES: protein motif:HMM:NF016214.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal-dependent hydrolase"
                     /protein_id="HYX53380.1"
                     /translation="MEPVTHFLTGACLGRAGLNRTTALATLTLTLAAEAPDLDVVFYA
                     GGSVTGFAHHRGFTHSFLGAPIVAAVVVAGVYGIYRWMLARGRPTRTLPNWKLLYAYA
                     ILANFVHIFQDYTNNYGVRPFWPVSERWYSWDIVFILDPVMLLAMFAALVGPGILALI
                     SEEVGERRPAFRGRGAAIAALVCVAGLIFVRGIEHRRAITALNSLTYRGEEPLRASAF
                     AGWINPFSWNGLVETRDFFQMMPVNSLAGEVDPQGAAFVRYKPEETAATLAAKKSHLG
                     RVYLDWAGYPVVEAERMSDNSGYLVHFVDLRFYGTGVLRRQGSVPLQAYVILDPHLQV
                     TDEGMGRAPEESSAKEKVR"
     gene            complement(8543..9031)
                     /locus_tag="VE783_08005"
     CDS             complement(8543..9031)
                     /locus_tag="VE783_08005"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53381.1"
                     /translation="MTASLSGKVHRLHFALLRLAALFFLFAVCILPAHAATYDALNAD
                     VPFKFKVGDRTFRPGHYQFVLVGNGLIAVRDAKSHVIASLMARHAETIGPVETSKLVF
                     RAKKKDRLLSQIWIDTKGDVLDVLGEQPAMPPIPSSLPSPLIRPELDSLLERRTSPGF
                     KR"
     gene            9195..10871
                     /locus_tag="VE783_08010"
     CDS             9195..10871
                     /locus_tag="VE783_08010"
                     /inference="COORDINATES: protein motif:HMM:NF012698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix domain-containing
                     protein"
                     /protein_id="HYX53382.1"
                     /translation="MTNHAVEYRFGPFVLQLGEHRLLRDGVDVALQLKAFEILTHLVE
                     HAGRLLTKDELLQKVWPDATVEENNLNKNISLLRKLLGDCGGGQCYIETVPRVGYRFI
                     ATVEKTSMEPVTVEEPRKKACLAKSVAVLYFENLSRDGADEYFRDGITEDVITELAKI
                     REICVFPRSAVLAYRDTPLPAAQVGQKLSAAYVLEGSIRRAGNRLRVTAGLTETATGH
                     SAWAERYDGGLEDVFAIQDEIAKNIAQALRVMLSDQERDAIEKVPTRDIQAYDYYLRG
                     RQFFYQGRRQDLEFARQMFARAIEIDPGYSRAYAGMADACSFLAKWFHNREDNLQHAL
                     DASRRAVQLDPDSCEARASRGLAEFLSGNHEFAQKEFERALALDPGSFEASYFYGRSC
                     VAQGNFEKAAELFQRAGHVCRDDYQAPALLGMVLRKLNRHEEATEVLRDALRRAEEHL
                     RLNPDDVRAVSLSACAFSSLGQHERALQWLDRALALAPEDAAILYNAGCTFAKVHETA
                     KAIDCLEKALRLGFWHKGWMENDPDLESLRKLPRFQRLMEEFEADFTLTS"
     gene            complement(10887..>11546)
                     /locus_tag="VE783_08015"
     CDS             complement(10887..>11546)
                     /locus_tag="VE783_08015"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53383.1"
                     /translation="LGSGNLLATDLRLPSNPVHAAQALLTYKAREIQPGLITCQTPHG
                     VKQRYFVVAAGVGSDAELMYRTAVEAKERFGRNAYFIEMARMTFRGEFPMFHVDWKDE
                     DGALHSENVALVMAIRARKFPGLLRFVNLRSSLLKPRYALLIFRTDKVRHFLNYFASI
                     ASGVNWKVPNVELVHANWFRCTATAEPRIRCQADGELLGSVPAEVGIAEKSFRLLMPP
                     E"
BASE COUNT         2486 a         3129 c         3439 g         2492 t
ORIGIN      
        1 tggtaccagc acttttgacc gttatagagt tgcctgttgt cgccgataga gttattttgg
       61 atgaggctgt actccagttg gttcctgctc cagacgacga tgtgagcgtg atggacgtgt
      121 cgtacccagc gggggtcgcg ccaccgaagt accagaccac cggaggcccg gtaattgttg
      181 gtggatctgg agttggtggc tcatagcatg gcggacatct cggcccacca tctataaagc
      241 aaaccgggca gcaattgatg gaggcatact caccagggat aaacatgttg ttgaaaggaa
      301 tattgaatcc ctgacgaaga ttgtcagcgg ttttcgcatt gtcaaacagg aacatctttt
      361 tcagcgacgc ctccggacct tgctccggcg ttaaaatctc agccccatct ggaccagaga
      421 gctgaaatgt gccgagattc tctgaaaagc gcaccggacc tatgattcct gagatcgggc
      481 gagtggctaa aacttgcgac tggctggcaa aggtaaagcc ggtatcgcgg cggtcttctg
      541 ccagcaccgc tgcgtggtag tgctgttcaa tcaatgagcg ttctccgggc ttgtaagtat
      601 aggtgagccg ctggccatcg ggcgttacca ctgccgtcag ccggttgagc gcgtcgtatt
      661 cgaaacgagt cacggatttg ttcttcttga tctcagtcag atttccgctg gggtcgtact
      721 tgaattccgt aacggttccg tcgaatagcg tccatttggt cagttggtat gaatcgtcca
      781 tttccagcgt ctggccattc acctgcttac ccttgttatc gaacactttg ctgccggtca
      841 ggttgcccgc agggtcatag ctgtattgcg acccgcgtcc gttgctgagc gctatcctgg
      901 aacgcagtcc ggaggtttgg tactcgtacg tacttttgaa accaccggga aaaattgcct
      961 gcttcagttg ccctccagcc ttatacgaaa gccgcattgg cgccttgttg tcatttgtca
     1021 tggaagagaa aagaccgtca gcgtcggttt cgaaagtggc actcaggcca ttttctgaga
     1081 tggcagagag ggcaccgaaa ggtgaaaact ggaatttatg ctctccgtct gggagcacgg
     1141 cagaggcgat atttccattc tgatcgtacg tgaatgaccg gttctttcca tcgctggact
     1201 gaatggaagc gagctggcca gtggcaggat cgtacgaata ttgccgatcc accatacccg
     1261 agtcactgct ggtgtgtcgg gcggtgagcc ggtgctggtc gtcaaactcc atgcgttcca
     1321 ggaccgaacc atttcgcaga atcgatgccg gatttcgcga gttgtcgaga gtaatcgcgg
     1381 tttcctctcc caaggggttg atgacgcgcg tggtgatgcc ttctgaattc tggaagaagc
     1441 ggcttatcag gttcttgcgg tcgattaccg tggtgacggc gaccgatcga tcgaaactga
     1501 actgaattac gccggaaggg agttgcaggc ggcgaacttg tccgttctgg tcaaaactgg
     1561 cgccaaaatt gaggcggtta agcggatctc tggcctcatg cagcttttca tcagcgctgt
     1621 agctgtaact ccagaccctc ccggcaagat cgtgcgcctc ggtgagctgt cccttgtcgt
     1681 taaatgcaaa ctgtacgctt cggttctggt catcctgcgc tgaagtgatc cgtccggtct
     1741 tgtcgcgcaa gatgatgatg ctgtgattgg cattctcgat cttcgacagc agcccgctcg
     1801 cgtaagtgag tcgcacctcg tttccgtttc ggtcccgcac ttgcactagt cgaaatacat
     1861 ctccaattct ctggaatcgc ttaacaaacc cggtgcgcaa ctttgctatt aatacgtttt
     1921 catcgacgac tgtcagttcc tggtagtcag acgggaagtc tcgctccaac cggaaccctc
     1981 ccgcattatc ggcaacaaag tcgatgctgg atgcgttctc gccggccagg tgggccttgc
     2041 catctgcaac ggtgattgac tcggcggctg aaagtgtcca gcccggacca aaatcgacgc
     2101 ttcccttgcc gctggaatca tatacgcgtg caaataccag cgggatgcgc cctggtacca
     2161 ccatgtctcg ccgctgtaac gtcagattcc cgtcgccgac gttcacaaag ctgacttgaa
     2221 ctccgcggaa aattgattgc ggatttgtga aatagacatt agcgcgtgcg cgtgcgctca
     2281 gctctgaaac ctgctccacg tactgatcaa gttgggaatg tgtggagtgc tgggcaacgg
     2341 ctaaggttga gcaaaccagg acgatagagg cggtaaaggc gaacctgcga gacatgcgga
     2401 actcctgtct tgaaatcagg gcccgtgaag cagtccgagg ttagagccag caggtactcg
     2461 ggatggttgc tggagacttt acttttcctc gaaaataagt tttctctagt gccattttgg
     2521 gaatcgagcg gcttcttacg agtcattccg gcttaggcgc tggtatacat ctgttggtgg
     2581 tttccagatc ggcgggatca aggtgttccg aattgtgctc gaagcaccag ttggtaaatc
     2641 catgaggata tcgctcgcgc acgccagccg gtacgtcact ttcttttagc gggacaaatt
     2701 cgaaatcaat ttttccgtcg gctttgaccg ttcccagcag atagccatac acgtcgcgct
     2761 gggcgagtgg tccgggttgg actccgggcg gaaggtcatt acgcactgct cctgcggtgc
     2821 ctacaatcca gccatccagg cgatgattct gaggctcgcg cctgaagata tcagcaagca
     2881 agaaatggga gtggcttgcc agaacgtaaa cattcttttt tgtttttagt tggatcagtg
     2941 cttcatagac gtgtttcccg ctcttgcagc cggcagtgtc tttggtggga tcgtcacaca
     3001 tggaatggtt gtttgcgatg ctgtaaggca gcgcttcatg cattccgacc accacagcct
     3061 tgactttgct gtcgggggcg gaggcccgtg aaatgacgca gtcaaaccag tccagttcat
     3121 ccggcggaaa ctgcatgctg gaattgtcca ggtagatgaa atccactccc ccctgaatcc
     3181 agtgatagta agtttttgcc gccacataag gctggcttgc aatcttccag caggcgccgc
     3241 tctttgcgct cttgatctgc tcggcttcca cgcgctccat ctggaggcga ggcgtaagca
     3301 gccagtcctg gaactcagta gaaaactgct ggaggttttt gggcggaatt atttcgtgat
     3361 ttcctatccc caggtaaaag cgggtgattc caaacggtgc aatctggtgc tcgataaagt
     3421 ccggccatgc gtttttcaaa tacgactcgc agctcaggta gtgcccggcc ttccgggctt
     3481 cagcggccat gtcttcatca actttgtaga tggcgcgtag gtcgcctaaa tgccagtaga
     3541 agtatggctg ataatgcgcg gcgctatggg cagcgatgac gggcattacc acgtcaccgc
     3601 aattgcggga gtcgccagag atgatgaaat gccaggaagc gggcgtggac ggcgctggtt
     3661 gcgcgttctg agcgcggagt tcggaaattg gcaggagcag aagacttgct gccgccaaga
     3721 tgaccaatgc cagccttgca atgactgaat gtttgacggg cacgggattc tccacgggat
     3781 ttgctctcgc ctgaaagctt tcctggttgg cgattgtacg ccagcgcgcc gcagaagatt
     3841 ggatcgggag tcagggaaaa agaaaaacgc gcgccgattg gcacgcgttc tcattactca
     3901 tccgtcaatg agtctgcttc ttttgagccg tcccgatctt ccggcaaccg tgaaatgctc
     3961 gggcgagcag agtctccgtg aagttctatc agacggtctt cggctccggc ctgagaggcg
     4021 gttcgtaagc gcagcaggag tcctgctgga acatgtcgcc ataggcgcgc agggcacgtg
     4081 cgcgcgagcc gccgcataca tcatgaaaac tgcaacggcc gcacttgccc gtgagccttc
     4141 gtgtctcccg gaacaggcgg aacagctcgg cttcccgata gacgtccttc aagggctgca
     4201 ccctcacgtt gcctgccgaa agcgggaagc aggcgctggg atagacttcg ccggtattgc
     4261 tgatgtaagc cgttgccagc ccctcattga gcggcaggat gcccggaatt ccattcgctt
     4321 caaagctgtc ctgcgccggg ttccacagct tgtctgcgcg ctcctgcgac cgctgctgga
     4381 gcacaaagcg gcgatagtgc tgcgcttcca cagttttgat tttgaatgac acctgttgcg
     4441 agatcttgta aatggtggcg aaggcctgct caaattcttc cgccgtgagc acgtcttccg
     4501 gcaatagctt tccatcgggc accgggaagg tgatgatcca cagcattacg cgatgctgct
     4561 tgagcagcgc ggcaatgttt tccaaatcat tcaggttgtg gcggcaaagg tcggtgtgga
     4621 tctgcagagg cagccgccat tcattcgcga cctgcatcgc cctgcgggta tgctcaaagc
     4681 ctttcgggtg ccgcgtgatg ctgtcgtgca gctccgctgt ggagccatcc actctgagcc
     4741 ccaggcgggc aagtccggaa ttcttgagct cggcaattac gtttcgagta agagcaaagc
     4801 tcgcgtcaag caccagcgca ggatgaaggc cgcaggaacc cgcgtagcag atcaggctga
     4861 agatatcatt gcgggccagc gggtcacctc cctcaatgat gaacaccggc ggcttcagct
     4921 ctgcaatgtc gcggatcatc ttctcagctt ctttggtgtt cagctccagc ggatcacgct
     4981 ccggctggcc ggtctcgtag caatacgcgg gatcacaact ctgtgtggct tcccagacca
     5041 cggtcattgg ggtttttgcg atgtcgaaag tcgatttcat ggcatttcac ctgtggcgca
     5101 gcgattaaga actgctcttg tcgggtacgg gaggaagatt aagatttcgc ggatttttgc
     5161 tatgtgatgg ctgtcacata gatggttgtt acgcgctcag atttggtgcc taagagtttg
     5221 ataaagagcg ggttagtgag aacaccactt tcctttcgtg gtgcggggcg gggcggttcc
     5281 aagtgggctg aagattaaga aaactaataa atgcgaagag cgatcgacgg ccggaaaccc
     5341 tggtagagac gtggccggag ccacgtctct cagaggttga actaaacgat gcagcccgcg
     5401 cgaatagcca cgtgcggctg gtaaatgcag tgatcgtcct gtgcgaacag gtcgccggca
     5461 actgcccagg agcgcgcacg cgagcctccg cagacatcct tgaactcaca gaggctgcac
     5521 ttgcccttca ggttccgggt ttcacgcagg ctggagaaca gcgcaccgct gcgatagacc
     5581 tcggcaacat catctgtccg cacgttgccg gcggagagcc gcagggtgga gctgggataa
     5641 atttctcccg tgctgctgat aaacagcgtg gcacgtgact catttaccgg cagaattccc
     5701 ggaatgccct gcggttcgcg atcaatggtc accagattgt catggcgatg ccgggagcgt
     5761 tcctgaagaa caaagcggcg gtagtgcgga gcgtccacgg tcttgatctt gaagttgact
     5821 tcctgcgcca gaacatacaa ccgcgcgaag gccagctcga actggtccgc cgttggcaca
     5881 tcgtccatct caaatggccc ggaaggaacc aggaaagaga cgtgccaagc cattacccga
     5941 agtcccttga gcagcgccgc aatggcctcc aggtcatgca agtttctcct ggaaacggtg
     6001 gtgtgcacct ggacgggtag atggccttca cgcgcgtact gtatgccgtt caaggtgttc
     6061 gcaaaggagc tttcaacccc cgtgatttgc tcatgcagtt cagcggtgga gccgttcagc
     6121 acgaatccaa tccgggaaag ccccgctcgg cgcagctcac ccacgttcac gcgcgccagc
     6181 tgcgacgcag ggccaagaag catggttggc ttgagatggc acgccgtggc gtactgtacc
     6241 aggctcagga tgccctggcg gcgtagcgga tcgtggccgg caaaaacgaa aataggtgga
     6301 ttcagttttg cgacctcgcg gatcatctgc tccgcttcga agtcgtttaa gtccagatcc
     6361 ggaggtctgg ggggacttgg ctcgccgctg atcgggccgg aacgctgatt cgtctcccag
     6421 atcgcggcaa gagggtgcga ttgcaattca aaatgatttg tcatatccgt cggttactgc
     6481 tcagtactgc tcgttgacga tattgttagg ccggaggcgg cggggcgaga agggcaggag
     6541 gcctcaacct gacaacctaa agtaataaga cgaatctaag ccgtctattc tcaagcactt
     6601 gtcgtacggc aaatggcgcg taaattgttt gtaaacccgt ggaacacctt aggccgcatt
     6661 agaaagccta ataaaaagtg aagaacattc agcagatcgc cgcgccgaaa cacgaaaggc
     6721 gctccggtga ccagagcgcc tgaaagtgac tgaaatttct gccggttatg cggtagcgtg
     6781 cttcgcctta taaccacgca acgcgtgagt gacgagggcg ccgcacccga agaacaagat
     6841 cgagaaagcc agatcggatt ctaatccggt acggaaaaat ggcagagcct ggacgtagca
     6901 gttgatcagt ccgctgagac ttttctcata cggaatatat ccggcgagcc acacagcaaa
     6961 gttgctgacc aggaaaaacg ataccgaggt gctgagggcg ccggcgacaa cgtatgccgg
     7021 tttcactcga tctttcatca ggaagccaag ggagcagggc accgcatacc atgcccaaac
     7081 caccatctgg tcccatgtga gaggcaggtg atagacgcgg taattcagga agatgtccga
     7141 gccgatcagc agcgcgattg gcgcccaaag gtttttgcct gaggtgcgcg caccgaaaaa
     7201 taacagcgag gcgccaaccg gagtgaatcc cagcgtggca aacgtcccgg tacctgccag
     7261 gacccggatt gctacagcta acacgacgaa cagataagcg agcatcatgc acctcaagct
     7321 aactattctc tatggccgcc tgcccaagcg tcaaccatgc cacaattcag cggaccttct
     7381 ccttcgcgct gctctcttcg ggagctcgtc ccatgccttc atcggttacc tgcaagtgcg
     7441 gatcaagaat cacatacgcc tgcagcggca ctgagccctg ccggcgcagc actccggttc
     7501 cgtagaaacg caggtcgacg aaatgaacca gatatccgct gttgtctgac atgcgctcag
     7561 cttccaccac ggggtaccct gcccagtcga ggtaaacccg cccgagatgc gatttttttg
     7621 ccgccagcgt ggctgctgtt tcttccggct tgtaacggac aaatgccgcg ccttggggat
     7681 cgacctcgcc tgcgagggaa ttcaccggca tcatctggaa gaagtcgcgg gtctccacca
     7741 gtccgttcca ggagaaagga ttgatccaac ccgcgaatgc cgaggcgcgc agcggttctt
     7801 cgccgcggta agtgagcgag ttcagcgcgg tgatggctcg ccggtgctcg atgccgcgaa
     7861 caaagatcag ccctgccacg cacactaatg ctgcgatagc agcgcctctg ccgcgaaaag
     7921 ccggccggcg ctcgccgact tcttctgata tcaacgcaag aattcccgga ccaaccagag
     7981 ctgcgaacat ggccagcagc atgactggat caaggatgaa cacaatgtcc cacgagtacc
     8041 agcgttcgct cacaggccag aacggacgga cgccatagtt gttcgtgtaa tcctgaaaaa
     8101 tatgaacaaa gttggccagg atggcgtagg catacagcag tttccagttc ggcagagtgc
     8161 gggtggggcg gccacgcgct agcatccagc gataaatgcc gtagactcca gcgacgacca
     8221 ccgccgccac aataggcgcg cccaggaacg agtgcgtaaa gccacgatga tgggcgaagc
     8281 ctgtgaccga tccgccggcg tagaacacca cgtcaaggtc tggcgcttca gcggcgagcg
     8341 tgagcgtgag cgtagccagt gctgtggtgc gattcaggcc tgcacggccc agacacgctc
     8401 cggtaaggaa atgggtaacc ggctccaaag gttgagtccc tccagcgggt gaagggcgat
     8461 tgtaaatgga cgcgaaacga aaaaagcctg cctgaagtcg gagtactcca ggcaggcgca
     8521 ttggcagtgg ccaagaggaa acttaacgtt tgaagccggg cgaggttctc ctctccagga
     8581 gcgaatcaag ctcgggccgg atgagtggac tcggcagcga ggagggtatg ggcggcatgg
     8641 cgggctgttc acccagcacg tccagaacgt cgcctttggt atcgatccag atctgactca
     8701 ggagcctgtc tttcttcttc gcccggaaaa caagcttgct ggtttccacc ggcccgatag
     8761 tttccgcgtg ccgtgccata agggaggcga tcacgtgcga cttggcatcg cgcaccgcaa
     8821 taaggccatt tcccaccagg acgaactggt aatgaccggg ccgaaacgtg cgatctccga
     8881 ccttgaactt aaacgggacg tcagcgttca gggcgtcata ggtggctgcg tgggccggca
     8941 atatgcatac ggcgaacagg aagaacaggg ccgcgagtcg aagtagagca aagtggaggc
     9001 ggtgaacctt ccctgaaagt gaagcagtca ttagcggaat tctcctcatt taaatttcct
     9061 gaatcgtgta acgggtgagg tgaatcggac acataatctg gttcgccccg cccgcctgta
     9121 tgtattaagc agcccgggtg cttccagagt ccttccggcc cagtggcttt tttcttactt
     9181 atttgtgagc agtcatgaca aatcacgccg ttgaatatcg cttcggtccg tttgttcttc
     9241 agcttggcga acatcgattg ctgcgcgatg gagttgacgt cgcattgcag ttgaaagcct
     9301 tcgagatcct cacgcacctg gtggagcatg ccggccggct gctcaccaag gacgagttgc
     9361 tgcagaaggt gtggccggac gccacggtag aagaaaacaa tctgaacaag aacatctcat
     9421 tgctgcggaa gctgctgggt gactgcggcg gtgggcagtg ctatatagag acggtgccgc
     9481 gcgttggcta ccgctttatt gccaccgtgg aaaagaccag catggagccg gtcacggttg
     9541 aggagccgcg aaagaaggcg tgcctggcga agtcagtggc agtgctctat tttgaaaacc
     9601 tgagtcgcga cggcgcagac gagtatttcc gtgacggcat aacggaagac gtgatcaccg
     9661 agttggccaa gatcagggag atatgcgtgt tcccgcggtc tgcggtgctg gcgtatcgcg
     9721 ataccccctt gccggcggcg caggtgggac aaaagctttc tgcggcctac gtgttggaag
     9781 ggagcatccg ccgggcgggg aaccgcttgc gcgtgaccgc cgggctcacc gaaacggcta
     9841 caggccactc cgcctgggcg gagcgttacg atggcggact ggaagatgtt tttgccatcc
     9901 aggatgagat tgccaagaac attgcccagg cgctgcgggt gatgctgagc gaccaggaac
     9961 gcgatgcgat tgaaaaagtt cccacgcgtg acattcaggc ctatgactac tacctgcgcg
    10021 gacggcagtt cttttatcaa ggacgccggc aggacttgga gtttgcgcgg caaatgtttg
    10081 cgcgggcaat tgaaatcgat ccgggctatt cacgcgcgta cgcgggcatg gccgatgcct
    10141 gctctttcct ggccaagtgg ttccataatc gtgaggacaa cctgcagcat gccctggatg
    10201 cgagccgccg tgcggtgcaa ctggacccgg actcgtgtga agcgcgcgcg tcgcgcggcc
    10261 tggctgagtt cctgagcggc aatcacgagt tcgcgcagaa ggagtttgaa agagcgctgg
    10321 cgctggaccc gggatcgttt gaagcttctt atttttacgg ccgctcctgc gtcgcccagg
    10381 gcaactttga gaaagctgcc gagctgtttc agcgcgccgg gcacgtatgc cgcgatgact
    10441 atcaggcccc ggccctgctg ggcatggtgc tgcgcaagct gaatcggcat gaggaggcta
    10501 cggaagtttt gcgcgacgca ttacgccggg cggaggaaca cctgcgcctg aacccggatg
    10561 acgtgcgtgc ggtctcgctc tcggcatgcg cgtttagctc gctgggccag cacgagcggg
    10621 ccttgcaatg gcttgaccgg gccctggccc tggctcctga agatgcggcc atcctttaca
    10681 acgcgggctg cacgttcgcc aaggtccacg aaaccgccaa ggcgattgat tgcctggaga
    10741 aggcattgcg gctgggtttc tggcacaaag gctggatgga gaatgatcct gacctggaat
    10801 cgttgcgcaa gctgccccgg ttccagcggc ttatggaaga attcgaagct gatttcacgt
    10861 tgacgagcta ggccttcgtt agcaggctac tccggcggca tcaagagccg gaagcttttt
    10921 tccgcgattc cgacttccgc cgggaccgaa cccagcaact cgccatctgc ctggcagcgg
    10981 atgcgaggct ctgccgtggc ggtgcagcga aaccagttcg cgtgcaccag ttccacgttg
    11041 ggcaccttcc aattcacgcc ggaggcgatg ctggcaaagt agttcaggaa gtggcggacc
    11101 ttgtctgtgc ggaagatcag cagcgcatat cgcggtttga gcaaagacga gcgcagattg
    11161 acgaagcgca gcaggccggg gaacttgcgc gcgcggatcg ccatgacgag cgccacgttt
    11221 tccgagtgca gcgcgccatc ttcatctttc cagtccacgt ggaacatggg gaactcgccg
    11281 cggaaggtca tgcgcgccat ttcgatgaag taggcgttgc ggccgaagcg ttccttggct
    11341 tccacggcgg tgcggtacat gagctcagcg tcagagccta cgccggctgc aaccacaaaa
    11401 tagcgctgtt tcacgccgtg cggcgtctgg caggtgatca agccgggctg aatttcgcgg
    11461 gctttgtagg tgagcaacgc ctgtgccgca tgcaccggat ttgatggaag gcgaagatcg
    11521 gtggccagga ggttgccgct gcccag
//
LOCUS       DASQYP010000248         5160 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_157545, whole genome shotgun sequence.
ACCESSION   DASQYP010000248 DASQYP010000000
VERSION     DASQYP010000248.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 5160)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5160)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5160
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_157545"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..3074)
                     /locus_tag="VE783_08020"
     CDS             complement(<1..3074)
                     /locus_tag="VE783_08020"
                     /inference="COORDINATES: protein motif:HMM:NF025006.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015267 - channel activity [Evidence IEA];
                     GO_process: GO:0015891 - siderophore transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HYX53384.1"
                     /translation="MHLNVKLRASVLFVLCFALVCAIPTFGQVIKGSISGSVTDPQGA
                     VVSGAQVKATNTATGVALTTTSDSSGLFRFNLIPVGAYKVEVSAQGFKTAVQNNVAVA
                     AGVDASVGAIKLTVGETSTTVEVAAEAPLIETTQAQVTNTFSTQTLQTFAGIQENQGL
                     DNLALFVPGIVSVRDNSFSNTNGGQGFSSNGLRGRNNDQQIDGQNNNDNSVGGPGLFV
                     SDTEFVQQYVLITNQFGPEYGRNAGSVVNVITKSGSNAWHGSVYENENNSVMNSMNNG
                     ERRFAVDKAGNPLTEKPRLNDEFGGFTIGGPIVKNKAFFFGGFDQEITATVANFQNTS
                     LTPTPAGLATLATCFPGSQTLTTWNKFGPYAISAGNPTPIPVGLNATGTKKGFIPIEL
                     FDNTGTACDNVQFGGVERDLSAPFHGFNFVNRVDYQQGNDNFMARYLFNRGNNFNQDF
                     GDAAAGYPVSVPALSQAILVGWTHNLSTRMVNELRVGFNRLNVDFGTNTIGTVPSGGN
                     LDQGLARISFRFPSGFDCNGSALGAPCTVPLPNIGYMAIGTATNLPQFRIVNTWQAQD
                     NWNFVMGKHTFKAGVNYTFQRSPNGFLPTVNGAYQFDGWGDTIGAGASFLSNTPNRVQ
                     VAQGASTLDFREHDTFIYGGDDWKIGKNLTVNLGLTWTYYGQPANLFHDQTVAQQSAT
                     PPVWLGSLPQSVTTFPIFPAPKNSFGPSVGFAYSPQWGGFLTGNGKTTFRGGYRLLYD
                     PPFYNIYLNMASSAPAVFLQTFTGGSRIPTSPDATTLGMPAIPLGPNVRASLGSQLQL
                     NAFDPRSFNDTTMDPNFGPDKVHSWSFGLERELTKNSVIEARYAGNHATDLFQSINAN
                     PVVGHYQAGTRTVRGLADDFPNLVPAGITPCPLGAVVPGPGQTQASNALGQGRLNCGQ
                     GVLRSRTNGGVSDYNAAQIEFRANNLFKQLTIRTGYTYSKNLDNVSEIFSTFGGATSV
                     AFAQNPFNQTGERSFSGLDIPHQWTILFTEQLPFFKEQHGFMGHLLGGWSFSG"
     gene            complement(3289..3531)
                     /locus_tag="VE783_08025"
     CDS             complement(3289..3531)
                     /locus_tag="VE783_08025"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53385.1"
                     /translation="MAKVFTIPVLPDPSRRKTKQRTADPRYIEGQKVLVEAIRYLAKQ
                     DPEGNKEAVTLLSEHFRTRFRMSDRPAELPDLAPES"
     gene            complement(3635..4384)
                     /locus_tag="VE783_08030"
     CDS             complement(3635..4384)
                     /locus_tag="VE783_08030"
                     /inference="COORDINATES: protein motif:HMM:NF015510.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA];
                     GO_process: GO:0042953 - lipoprotein transport [Evidence
                     IEA];
                     GO_process: GO:0044874 - lipoprotein localization to outer
                     membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane lipoprotein carrier protein LolA"
                     /protein_id="HYX53386.1"
                     /translation="MKRERFFLNTTAVVLLCAGCMLAQNAPKPAAAGAPQNQSSTPTQ
                     GGDLQTVLSAMNRSSAGFKSAQADFSWDQYDAVVKETYTQNGTIYFKRTKSGLDAAVK
                     VTAPDPKQVVFKDGKLRLYQPKIEQVTEYEAGSNRGQVESIMSLGFGARGDDLARSYD
                     VRLQGWETVDGVKTAHLELIPKDQKFKASINRVELWMDPERDISLKQQFFEPGGNYRL
                     THYSNIKLNEKISDKAFDIKTTSKTKVVTQQ"
     gene            complement(4423..4806)
                     /locus_tag="VE783_08035"
     CDS             complement(4423..4806)
                     /locus_tag="VE783_08035"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53387.1"
                     /translation="MSRIWRTIKGYLFWTYERGSFHYDVMVTIILLFIFLAPRFMNFK
                     DQPAEHVGHPTGIIITPDGDKGTMYQVDASAVDAQDTGMVRRNFTRLLRPMTGPVVID
                     KIEPVRDETGHIVSYRAWGHPQQKP"
     gene            4951..>5160
                     /locus_tag="VE783_08040"
     CDS             4951..>5160
                     /locus_tag="VE783_08040"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53388.1"
                     /translation="METLLADLRHSIRVLIKSPGFTLVAVLALSLGIGANTAIFSVID
                     RVMLSPLPYPDSERIMRLQRKFPNGN"
BASE COUNT         1054 a         1411 c         1532 g         1163 t
ORIGIN      
        1 ccggagaacg accagccgcc cagcaggtga cccatgaagc catgctgttc cttgaagaac
       61 ggcagctgtt cggtgaacag gatggtccac tgatgtggga tatccagtcc ggagaaggag
      121 cgctcaccgg tctggttgaa cgggttctgg gcaaaggcaa cgctggtagc gccaccgaag
      181 gtgctgaaga tttcgctgac gttgtccagg ttcttggagt aggtgtaacc ggtccggatg
      241 gtcaattgct tgaacaggtt gttggcgcgg aactcgattt gagccgcatt gtagtcagaa
      301 acgccgccat tggtacggct gcgcagcaca ccctgaccac agttgagacg gccctgcccg
      361 agagcattcg atgcttgcgt ctggccagga cccggaacaa ccgctccgag cgggcaaggc
      421 gttataccgg caggaaccag gtttggaaaa tcgtcagcca gcccgcgcac agttcttgtg
      481 ccggcctggt aatgcccgac gactgggttg gcgttgattg actggaacag atcggtggca
      541 tggttgccgg cgtaccgggc ttcaatcacc gagttcttgg tcagctcgcg ctccagaccg
      601 aagctccagg agtgaacctt gtccggacca aagttcggat ccatcgtggt gtcgttgaag
      661 gagcgggggt caaaggcgtt aagctgcaat tgcgagccga gcgatgcccg tacgttgggg
      721 ccaagcggaa tggctggcat accaagcgtg gtggcatcgg ggcttgtagg tatacggctg
      781 ccgccggtga aggtctgcag aaacactgca ggcgcggagg atgccatgtt caggtagatg
      841 ttgtagaacg gcgggtcata gagcaggcga tagccgccgc ggaaggtggt cttgccgttg
      901 ccggtcagga agccgcccca ctgcgggctg taagcaaagc ccacgctcgg gccgaagctg
      961 tttttcggcg ccgggaagat ggggaaggta gtgacactct gcggcaggct gcccagccac
     1021 accggcggcg tggcggactg ctgcgcgacc gtctgatcgt ggaacaggtt ggctggctgg
     1081 ccgtaatagg tccaggtcag gcccaggttc acggtcaggt tcttgccgat cttccaatca
     1141 tcaccaccgt aaatgaaggt gtcatgctcg cggaagtcca gcgtgcttgc gccctgcgca
     1201 acctgaactc ggttgggcgt gttgctcagg aaggaggcgc ctgcgccgat cgtgtcgccc
     1261 cagccatcaa actggtaggc gccattgacc gtcggcagga agccgttggg cgagcgctgg
     1321 aaagtatagt tcacaccagc cttgaacgtg tgcttgccca tcacgaagtt ccagttgtcc
     1381 tgcgcctgcc aggtgttcac gatacggaac tgaggcaggt tggtggcagt gccgatcgcc
     1441 atgtatccga tattcgggag cgggacggtg caaggagctc ccaacgcgct gccgttgcag
     1501 tcaaagccgg aggggaagcg gaacgagatg cgggccagcc cctgatccag gtttccaccg
     1561 ctcgggacag tgccgatggt gttggtgccg aaatccacgt tcaggcggtt gaagccgacg
     1621 cggagttcgt tcaccatccg ggtgctcagg ttgtgggtcc agccaaccag gatggcctgg
     1681 ctgagagcgg gaacgctgac cgggtaaccg gccgccgcat cgccaaagtc ctgattgaag
     1741 ttgttgccgc ggttgaagag atagcgggcc atgaagttgt cattgccctg ctgatagtcc
     1801 acgcggttga caaagttgaa gccgtggaac ggcgcgctca gatcgcgctc cacaccacca
     1861 aactgcacgt tatcgcacgc ggtgccggtg ttgtcgaaga gctcaatggg tataaagccc
     1921 ttcttggttc cagtggcgtt gagacctacc ggaatcggag tggggttgcc ggcgctgatt
     1981 gcatacgggc cgaacttgtt ccacgttgtc agcgtctggc ttccggggaa gcacgttgcc
     2041 agagtggcga gtccagccgg agtcggtgtg agcgaggtgt tctggaagtt tgccaccgtc
     2101 gcggtgattt cctgatcaaa gccgccgaag aagaaggctt tgttctttac gatcgggcca
     2161 ccgatcgtga atccgccgaa ttcgtcattg aggcggggct tttccgtgag cggattgcct
     2221 gctttatcga cggcaaaccg gcgctctccg ttgttcatcg agttcatgac ggagttgttt
     2281 tcgttctcgt aaacgctgcc atgccatgca ttggagcccg acttggtaat cacgtttacc
     2341 accgaaccgg cgttgcggcc atactccggg ccgaactggt tggtgatcag cacgtactgc
     2401 tgcacgaact cggtgtcgct gacgaacagg ccagggccgc cgaccgagtt gtcattgttg
     2461 ttctgtccgt caatctgctg gtcattgttg cggccgcgca gaccgttgga agagaaaccc
     2521 tgtccgccgt tggtgttcga gaacgagtta tcgcgcacgg agacgatgcc gggcacaaaa
     2581 agagccaggt tgtcgagtcc ctggttttcc tggatgccgg cgaaggtctg cagcgtctgg
     2641 gtggagaaag tattggtaac ctgagcttga gtggtttcga tgagtggcgc ttcagcggct
     2701 acttcgaccg tggtgctggt ttcacccacc gtcaacttaa tcgcgccgac tgaggcgtca
     2761 acgcctgcgg caaccgctac attgttctgc actgctgtct tgaatccctg ggccgaaacc
     2821 tcaactttgt aggctcccac cgggatcagg ttgaaccgga agagtccgga actatcagat
     2881 gttgtggtca gcgcaacacc cgttgctgta ttggtcgcct ttacctgtgc acctgatacc
     2941 accgcacctt gcgggtcagt cacggagccg gaaattgacc ccttgatgac ctgaccaaaa
     3001 gtgggaatgg cgcagacaag cgcaaaacag agaacaaaca atacagacgc gcgcagtttt
     3061 acgttcaaat gcatctgcat ctccatattt agaaaatgca cacgcagtgg agcccccatt
     3121 gcacggtcta catgcaaata tcgggccgcg atagtgttgc tttgagggat ttaaaaacag
     3181 gaacttacgg cttaacaaag cttaacgata cgttgtttca tattgttaag agaactttac
     3241 tgtggctttt ggaacctaat caattaggag ggtttatccg cttaatactt aactctcagg
     3301 tgctaaatca ggcagctcgg ctggacgatc ggacatacgg aagcgcgtgc ggaagtgttc
     3361 tgagagcagc gttactgctt ctttattgcc ttccggatcc tgcttggcca aatagcggat
     3421 cgcctccacc aggactttct gcccttcgat gtagcgggga tcggccgtgc gttgcttcgt
     3481 ctttctgcgg ctcggatcgg gcaataccgg aatggtgaat actttggcca aactacacct
     3541 tctgtgcgca gctaatttgg atgccctcaa ggcggcaacc gttacgaaca caataaacta
     3601 attctgacgg gaaaagtacc ccctgccacg cggactactg ctgcgtcacc actttggttt
     3661 ttgaggtggt cttaatgtcg aaagccttgt ccgaaatttt ttcattcagc ttgatatttg
     3721 agtaatgggt gaggcggtag ttcccgcccg gctcaaagaa ctgctgcttc agtgagatgt
     3781 cgcgctcggg atccatccac aactccacgc gattgattga tgccttaaat ttctgatctt
     3841 tcggtatcag ttcaagatgg gcggttttca ctccatccac agtctcccag ccctggagcc
     3901 ggacatcata cgaccgggcc agatcatcac cgcgcgcgcc aaagccgagg ctcatgatcg
     3961 attccacctg gccgcgattg ctccccgcct cgtattccgt gacttgctcg atcttcggct
     4021 gataaaggcg cagcttgccg tccttgaata ccacctgttt gggatcgggt gccgtaacct
     4081 ttactgctgc atcaagaccg gatttggtgc gcttgaagta aatcgtgcca ttctgagtgt
     4141 aggtctcctt taccaccgcg tcgtactggt cccagctgaa atcagcctgg gctgatttga
     4201 atccggcaga cgacctgttc atggcgctca gcaccgtttg cagatcgccg ccctgcgtgg
     4261 gcgttgacga ctggttttgc ggggcaccag cagccgctgg tttgggggca ttctgcgcga
     4321 gcatgcagcc ggcacacagc agcacaactg cggtggtgtt cagaaagaat cgttcacgtt
     4381 tcatttttcg ctgaaaatcc cttgccttcc gccggaggga gatcagggct tctgctgcgg
     4441 gtgtccccag gcgcgataag aaacaatgtg acccgtttca tcgcgcaccg gctcgatttt
     4501 gtcgatcacc accggaccgg tcatggggcg cagcagccgg gtaaaattcc gccgcaccat
     4561 gcccgtgtcc tgcgcgtcca ccgcggaggc atccacctga tacatggtcc ccttgtcgcc
     4621 gtccggagtg atgatgattc ctgttggatg tccaacgtgc tctgccggtt ggtctttgaa
     4681 gttcatgaac cgcggagcca ggaagatgaa cagcaggatg atggtcacca tcacgtcgta
     4741 atggaagctg ccccgttcgt aggtccagaa caggtagccc ttgatggtgc gccagatgcg
     4801 tgacatggat taagtctata gaaatcccca aggcccattc aagctagagc tgtgcctctg
     4861 cctttaacct gtgccagcgc aaaatccagc ttcaatcgcc taagccaaaa aacacagaac
     4921 cgcatctcaa gttgctgcgt attcacccgc atggaaacgc tgttagcaga tctccgccat
     4981 tccattcgcg ttctgatcaa gagccctggc ttcacgcttg tggctgtgct cgctctctcg
     5041 ttgggaatcg gcgcgaacac cgcgattttt tcggtcatcg accgggtgat gctctcgccg
     5101 ctgccctatc cggattccga gcgcatcatg cggttgcagc gtaagttccc gaacggcaac
//
LOCUS       DASQYP010000249         4464 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_266226, whole genome shotgun sequence.
ACCESSION   DASQYP010000249 DASQYP010000000
VERSION     DASQYP010000249.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 4464)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4464)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4464
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_266226"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..639
                     /locus_tag="VE783_08045"
     CDS             <1..639
                     /locus_tag="VE783_08045"
                     /inference="COORDINATES: protein motif:HMM:NF012885.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53389.1"
                     /translation="VVNQKGAERAIATEAVQTLGFPYSVSPTFLDRNQHQTLEQSIDE
                     LEQIKLKADNAGLDVVVYISMAFGNPYGDLWNADEVSEAVGILADMDIHQISLADTVG
                     VAKPAQVRDLASAVISAYDHLEIGVHLHSTRAGAAEKVLAAYDAGCRRFDSAIGGLGG
                     CPFAQDEMVGNIPTEIAVQALREHGAEVGLKKPLESVAQMSAEIAKKHTVVM"
     gene            723..1211
                     /locus_tag="VE783_08050"
     CDS             723..1211
                     /locus_tag="VE783_08050"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53390.1"
                     /translation="MLTLAADYLLAESMALAWHVRHGFHVEMNGIRFKVPLLYYEDHG
                     SNMLELSLSTIPGRLNKKEATIVVDFHRQRPLSEDKAEVGGARLQKWGMSRSGTRTIQ
                     MVGRTGSCTDFTGKSASIPSPYVVDCSFGDEMRIHFFGTENAVADFYSILQSAEVVRG
                     KI"
     gene            1213..1992
                     /locus_tag="VE783_08055"
     CDS             1213..1992
                     /locus_tag="VE783_08055"
                     /inference="COORDINATES: protein motif:HMM:NF012596.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase-related protein"
                     /protein_id="HYX53391.1"
                     /translation="MSYKTVIYSEAQGIATITLNRPDKRNAISYELIDDVTAALKQAA
                     ASTAQIVILTGAGSAFCAGMDLENLKQLLGRTPEQNLQDSMTMAGLFRALYDFPKPTI
                     AAVNGAAIAGGTGLATLCDFTLAVPEAKFGYTEVKIGFVPGIVSSYLIANVGEKRARE
                     LLLTGRIFGAEEAQRLGLVNEIIAPDQLMARAHQLAAQLMESSPTSLRTTKALLSSYT
                     KEQLDRQVGNAVRENAAIRQTPDFKEGISSFLEKRKPKWNA"
     gene            1980..2426
                     /locus_tag="VE783_08060"
     CDS             1980..2426
                     /locus_tag="VE783_08060"
                     /EC_number="3.1.2.-"
                     /inference="COORDINATES: protein motif:HMM:NF024675.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioesterase family protein"
                     /protein_id="HYX53392.1"
                     /translation="MERVNLSGETRLRVRYAETDKMGVVYHSNFVIWFEVGRVELLRQ
                     LGFEYSSMEKEDNCHIPVVDLRVRYKSPALYDDEVVIRTHLKNVRSSLLHFAYEVRRA
                     GGDEALLAIGETSHIIVDRDLKRCPLPEKYLEAFGASKKSRPEQNP"
     gene            2423..3949
                     /gene="hutH"
                     /locus_tag="VE783_08065"
     CDS             2423..3949
                     /gene="hutH"
                     /locus_tag="VE783_08065"
                     /EC_number="4.3.1.3"
                     /inference="COORDINATES: protein motif:HMM:NF006871.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004397 - histidine ammonia-lyase activity
                     [Evidence IEA];
                     GO_process: GO:0006548 - histidine catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidine ammonia-lyase"
                     /protein_id="HYX53393.1"
                     /translation="MNPVRINGNSLTLDDLRDVVYERRPVLLEAEAREKVVAARAVVD
                     KLVRENRVAYAVNTGVGKLSDVHIEPAQNRQLQINLIRSHSVGVGEPLSIEETRAMML
                     LRANSLAKGYSGVRPEVIELLCEMLTRGVHPVVPSQGSVGASGDLAPLSHLALSMIGE
                     GEVFYENARVNAAEAMKRAQIKPLVPEAKEAISLINGTQAMLAVGTLALLAAETLVAT
                     ADVLGAMTLDALRGTDVAFDDRIHAARPHHGQMSVAANLRRLLAGSEIRQSHKDCGRV
                     QDAYSLRCMPQVHGAVRDTLDFCRKTFDTEMNSAVDNPLVFIRMGDEGDVISGGNFHG
                     EPLAFALDYLSIVLSAVAGISERRIERLVNPSLNENLPPFLAPDAGINSGFMMPQVTA
                     AALASENKVLAHPASVDSITTSGNKEDYVSMGMAGALKLKRVVANTANVLAIEACAAA
                     QAIDFLAPLKTSPLLQKAHAAIRKVSPRVEADRVLARDFAELAKLVLSGALLSATGAD
                     "
     gene            3951..>4464
                     /locus_tag="VE783_08070"
     CDS             3951..>4464
                     /locus_tag="VE783_08070"
                     /inference="COORDINATES: protein motif:HMM:NF018837.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SseB family protein"
                     /protein_id="HYX53394.1"
                     /translation="MSGSNGSGDALPNAALLRAMDNVSMHASEENWATLYNELLACRF
                     VVPVQKVPAEAAEGMNLEEGQFPVAILQARDNAGKLATLVFTDLEALRDWNAEIPYVE
                     MPARDLFQAIKDTEISAVIINLHRPDQQKLRMGGRITRFEFLALAEGLIPGRPDSSGL
                     ASMSVPEGMNV"
BASE COUNT          958 a         1224 c         1381 g          901 t
ORIGIN      
        1 gtggtgaacc agaaaggcgc ggagcgggcg attgctaccg aagccgtgca gacgctaggc
       61 ttcccctatt ctgtctcgcc gacttttctc gaccgcaacc agcaccagac gctggaacag
      121 tccattgatg aactggagca gatcaaactg aaggccgata acgccggtct tgacgtggtg
      181 gtttacatct ccatggcatt tggaaatcct tacggcgatc tttggaacgc ggacgaagtg
      241 agtgaagcgg tggggattct cgcggatatg gatattcacc agatttcgct ggcggacaca
      301 gtgggtgtag cgaagcctgc gcaggttcgg gatttagctt cagctgtgat cagcgcatat
      361 gaccatctgg agatcggcgt tcacctgcac agcacgcggg ctggcgcagc ggagaaagtg
      421 ctggcggcct acgatgcggg ctgtcgccgg tttgattctg ccattggcgg cctgggcggg
      481 tgcccgttcg cgcaggatga gatggtcggc aacatcccga cagaaattgc ggtgcaggca
      541 ttgcgcgagc atggagcgga ggttggcctg aagaagccgc tggaatcagt ggcccagatg
      601 tcagcggaaa ttgcgaagaa gcacaccgtt gtcatgtaaa aagggtcctg cggaatggtg
      661 ggggagcaag agggatgtcg aggggctgga gaattgtaat tgcgcttctg atagcgatgt
      721 tgatgctgac acttgcggcc gattaccttc tcgccgaaag catggccctg gcatggcacg
      781 tgcgccacgg atttcatgtt gagatgaatg gcatccgctt caaggttccg ctgctttact
      841 acgaggacca cgggagcaac atgctcgaac tctcattgag caccatccct ggacgattga
      901 ataagaagga ggccacgatt gtcgtggatt ttcaccggca gcgtccgctt tcggaggata
      961 aggctgaggt ggggggggcg agattgcaga agtggggaat gtcaagatcc ggaactcgta
     1021 cgattcaaat ggtgggtcga actggttcct gcactgactt cactggcaag agtgcatcca
     1081 tacccagccc atacgtggtt gattgttcct tcggcgatga aatgaggatt catttctttg
     1141 gtacagagaa cgccgtggcc gatttttact caattctgca gagcgcagaa gtcgtaagag
     1201 gcaagatata aggtgtctta caaaacggtt atttattccg aagctcaagg tattgccacc
     1261 atcaccctga accgccctga caagcgcaac gcgatcagct atgaactgat tgatgacgtc
     1321 acggcggctc tgaagcaggc agcagcttcg actgcgcaga ttgtgatcct taccggcgcg
     1381 ggcagcgctt tttgtgccgg aatggacctg gaaaacctga aacagttgct gggacgcacg
     1441 ccggagcaga acctgcagga ttcaatgaca atggctggat tgttccgggc tttgtacgat
     1501 ttcccaaagc cgaccatcgc tgccgtgaac ggagcggcca tcgcaggagg aacggggctg
     1561 gcgacgctct gcgacttcac tctcgcagtg ccggaagcca aatttggtta cacggaagtg
     1621 aagatcggat ttgtgccggg gatcgtttca agctacctga tcgccaatgt gggcgagaaa
     1681 cgcgcgcggg aactcctgct caccggacgc atcttcggag cggaagaagc gcagcgtctt
     1741 ggtctggtga atgaaatcat tgccccggac cagctcatgg ctcgggcgca ccagcttgca
     1801 gcgcagttaa tggagagtag tccgacttcg ctgcgcacca ctaaggccct gctttccagc
     1861 tacaccaaag aacagcttga ccggcaggtg ggcaatgcgg tgcgggagaa cgccgccatc
     1921 cggcagacgc ccgactttaa ggaaggcatc agctcgttcc tggagaaacg gaaacccaag
     1981 tggaacgcgt gaacctgagc ggcgagacgc ggctgcgcgt ccgctacgct gaaaccgaca
     2041 agatgggcgt ggtgtaccac tcgaatttcg tgatttggtt tgaggttggc cgggtggaac
     2101 tgctccgcca gctcgggttt gaatacagca gcatggaaaa agaggacaac tgccacattc
     2161 ctgtcgtgga cctgcgcgtg cgatataaat ctcccgccct ttatgatgat gaggtggtaa
     2221 ttcgtaccca cctgaagaac gtgcgctctt cactgctgca cttcgcatat gaagtacgtc
     2281 gtgccggtgg cgacgaggcg ctgctggcaa tcggcgaaac cagccacatc attgtcgata
     2341 gagacctgaa gcgctgcccg cttcccgaga agtatctgga ggcatttggc gcgtcaaaga
     2401 agagcaggcc agagcagaat ccatgaatcc cgttcgtatc aacggaaaca gtcttacgct
     2461 tgacgatctg cgcgacgtgg tttacgagcg ccgtccggtg ctgctggaag cggaagcgcg
     2521 cgagaaagtt gtggccgcgc gagcggtggt ggacaagctc gtccgagaaa accgtgtggc
     2581 ctatgccgtg aataccggcg tgggtaagct gagcgacgta catattgaac cggcgcagaa
     2641 ccggcagttg cagatcaacc tgatccggtc tcactcggtc ggcgtgggtg agcctctttc
     2701 gattgaagaa actcgggcca tgatgctgct gcgcgccaac tcgctggcga agggctactc
     2761 cggagttcgt ccggaggtga ttgagctgct ctgcgagatg ctgactcgcg gtgtgcatcc
     2821 tgtggtccct tcgcagggaa gcgtgggagc aagcggtgat ctggcgccgc tctcgcatct
     2881 cgcgctctcc atgatcggcg aaggcgaagt cttctacgag aacgcgcggg tgaacgccgc
     2941 agaggcgatg aaacgtgcgc agatcaagcc gcttgtccca gaagccaagg aggcgatctc
     3001 cctgatcaat ggcacccagg cgatgctggc cgtgggcacg ctggcgctgc tggccgcaga
     3061 aaccctggtg gcaaccgccg acgtgcttgg cgccatgacg ctggacgcac tgcgcggcac
     3121 ggacgtggcg tttgatgatc gcatccatgc ggcgcgcccg catcacgggc agatgagcgt
     3181 ggcggctaac ctccgcagat tactggccgg tagcgagatt cggcagtcgc acaaggattg
     3241 cggccgcgtg caggatgcat attcgctccg ctgcatgccg caggtccacg gggccgtgcg
     3301 cgataccctg gatttttgcc gcaagacttt cgataccgag atgaactccg cggtggataa
     3361 tccgctggtc ttcatccgca tgggagacga aggcgacgtt atctccggtg gaaactttca
     3421 cggcgagccg ctggcttttg cgctcgatta cctgtctatc gtgctgagtg ccgtggcagg
     3481 aatctcagaa cggcgcatcg agcgcctggt aaatccaagt ctgaatgaaa acctgcctcc
     3541 ctttctagcg cccgatgcag ggatcaattc cggcttcatg atgccgcaag ttactgcggc
     3601 ggcgctggcc agcgaaaaca aggttctggc gcatcccgcg tcagtggatt ccatcaccac
     3661 atccggcaat aaagaagact atgtctccat gggcatggcc ggcgcgctca aactcaaaag
     3721 agttgttgcc aacaccgcca acgtcctggc cattgaagct tgcgccgcgg cgcaggccat
     3781 tgatttcctt gctccgctca aaaccagtcc tttgctacag aaggcgcatg cggccatccg
     3841 caaagtcagc ccgcgcgtgg aagcagatcg cgttctggcg cgcgactttg ccgaactggc
     3901 aaaactcgtg ctctccggcg cgctcctctc cgcaaccgga gcggattgag atgtccggtt
     3961 ccaacggctc cggcgacgcg ctgcccaacg ctgccctcct gcgcgccatg gacaacgtct
     4021 ccatgcatgc ttccgaagag aactgggcca ctctttacaa cgagctgctg gcgtgcaggt
     4081 tcgttgtgcc ggtgcagaag gtccctgctg aagcagcgga gggcatgaat cttgaagaag
     4141 gccagttccc ggtagcaatc cttcaggcgc gcgacaacgc gggaaagctg gcaacgctcg
     4201 tcttcactga tctggaagcg cttcgcgact ggaacgccga gattccttac gtagaaatgc
     4261 ccgcacgcga tctatttcag gcgatcaagg acacggaaat cagcgccgtc atcatcaact
     4321 tgcaccgccc ggaccagcag aagctgcgca tgggcggccg gatcacccgc ttcgaatttc
     4381 tcgctctggc ggaaggcctg atcccggggc gtcctgattc ttccggcctg gccagcatga
     4441 gcgtgccgga gggcatgaat gttt
//
LOCUS       DASQYP010000250         9212 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_77239, whole genome shotgun sequence.
ACCESSION   DASQYP010000250 DASQYP010000000
VERSION     DASQYP010000250.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 9212)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9212)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9212
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_77239"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1060)
                     /locus_tag="VE783_08075"
     CDS             complement(<1..1060)
                     /locus_tag="VE783_08075"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53395.1"
                     /translation="MFWQITWFEVSYWLRSKMLWVFLAVIALAVFAAVSTPNLTLFIT
                     LTNTFHNAPWVISSYYSLLTLFMLLMAAAFVNSAALRDFRFNTNQIVFSTPMRRRDYL
                     LGRFIGATLVSIIPMLGVSLGILAAKYMPWIDPEQWGPVNWAAHWHAILVFAIPNALI
                     MAAILYAIAVLARNEVIPFIGAIVLLIGYITAGVLLQDLRHEEYAIFADPFGIRTFAI
                     VSKYWTVADKNSLPVAFSGLMLWNRLLWIVIAAIIFLFSYFRFSFTEKASKAVPVEPE
                     SQAQPIAVGRPVLNPHVTRAAWSQAFQSLRIHMRGMLVSIPFVIIMLAGGLNCLLALI
                     FNGTEGYGNSTLPVTYWVI"
     gene            complement(1073..1945)
                     /locus_tag="VE783_08080"
     CDS             complement(1073..1945)
                     /locus_tag="VE783_08080"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HYX53396.1"
                     /translation="MELRIENLSKTYKNGVKALDNVSLTIPHGMYGLLGPNGAGKSTL
                     MRTLATLQEPDTGSARLGDIDMLKQKDEVRRRLGYLPQEFGVYPRISAQDMLDHLALL
                     KGITNAKDRKEAVGAMLHRCNLYNDRKKALTGYSGGMRQRFGIAQALIGNPQLLIADE
                     PTAGLDPGERNRFYNLLAEVGEQVIVILSTHIVEDVVDLCTNMAIIHQGKVLYQGEPM
                     AAIRELNGRIWHRTIEKAELAHYEQTFRVVSNKLVGGRPFLHVYGEQPPGDGFVSHEA
                     DLEDVFFAKIRNWS"
     gene            complement(2033..2803)
                     /locus_tag="VE783_08085"
     CDS             complement(2033..2803)
                     /locus_tag="VE783_08085"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53397.1"
                     /translation="MDSDWRKRLQIFLIVALVLAGLRIAWIFYERKQPANPNENKPTY
                     STNADDYVSVPKIYAYDLKSADKELAGKPVWVRAGWAVPYYSFNATAGEAELKHQKGL
                     LPPLEKLDIQKVIVQRIPAQLKAGEVAVVQKQAFAVYKREGSSAPEAVSIATVNGDDF
                     NVTANDTLFFVDPHQLYKHWPAETWAAIDHHEAKPGMNELQVGFALGTSGSVGTGDYG
                     NREIEYNNGGHPVKVMFQNNKATSVSPEDAKEPAHGRS"
     gene            complement(2946..4031)
                     /locus_tag="VE783_08090"
     CDS             complement(2946..4031)
                     /locus_tag="VE783_08090"
                     /inference="COORDINATES: protein motif:HMM:NF015558.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="putative sulfate exporter family transporter"
                     /protein_id="HYX53398.1"
                     /translation="MASSQVLTAPQSFSWPRRLVSLVPGIALLAIVGMGGKVLEQGIA
                     RYSKAHHLVLPNVEYVLWAIGIGLVISNVFGVAEVFKPGIATYEFWLKSGIVLLGSRF
                     ILGDVFKLGAVSLALVLIELALSIGLMTVLGRVFKLSPKLTTLLAVGSSICGVSAIIA
                     TKGAIDADDEDASFAIAAILALGALALFTFPSIGHALGMSDHVYGLWAGTGVDNTAEA
                     VAAGALYSDAAAKIAVLAKTTRNALIGFVVLAYALYWAAREGRSVQGNKAAFLWQKFP
                     KFVLGFLLVSALASVSFFTHDQLSSIANLSKWAFLLTFAGVGLKINFRDMKKQGLRPF
                     LVGAIGEVVIAAITLGLVLAANKIVKI"
     gene            complement(4049..4177)
                     /locus_tag="VE783_08095"
     CDS             complement(4049..4177)
                     /locus_tag="VE783_08095"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53399.1"
                     /translation="MASTDSAKPTRRTILSLDTWAVILALSLAGLVRIGLLKYITW"
     gene            complement(4434..4772)
                     /locus_tag="VE783_08100"
     CDS             complement(4434..4772)
                     /locus_tag="VE783_08100"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53400.1"
                     /translation="MKRALLGILGTLVILTLLGCPTRTKISDINKDPGRYAGKEVTIA
                     GKTSQSFGAFSNGVFQLDDGSGTMWVYSQAYGVPSNGSKVAVTGVVQQGFSFGARSFG
                     IVIKETKRRH"
     gene            5066..5332
                     /locus_tag="VE783_08105"
     CDS             5066..5332
                     /locus_tag="VE783_08105"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53401.1"
                     /translation="MAVLPWTPHFKLFPKDGSPGDEYRIHSGRVEVRALGPDGEPYKG
                     YSEWIALTPQEIKLHFVRSTPVASWLREVLSDPKPRAVEATQAS"
     gene            complement(5340..6047)
                     /locus_tag="VE783_08110"
     CDS             complement(5340..6047)
                     /locus_tag="VE783_08110"
                     /inference="COORDINATES: protein motif:HMM:NF015272.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004833 - tryptophan 2,3-dioxygenase
                     activity [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_process: GO:0019441 - tryptophan catabolic process to
                     kynurenine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan 2,3-dioxygenase family protein"
                     /protein_id="HYX53402.1"
                     /translation="MNEMQKPILSGKGNTDYERYLRTDDLLSLQTPMDELSHPDELTF
                     QVVHQSSELLMKGAAWELERARVAITESDCPNAARLMRRANIMLQHPIELLHVLETIT
                     PYDYHVIRAGLGHGSGLDSPGFLALLHIAPRIGDAFQEQLRAKGLTVDDIYRRHQEFF
                     GLHDVAERMLDFDERMQVFRFHHLKLAQRIIGGGVLGTMGTPVEVLQQRMQHIAYREL
                     WELRNQITANSNGVVAR"
     gene            complement(6171..6656)
                     /locus_tag="VE783_08115"
     CDS             complement(6171..6656)
                     /locus_tag="VE783_08115"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53403.1"
                     /translation="MNAKALLIAGGIALAVIGMAYGLWYAVFAEHQALDSIGASLVKT
                     FTAAAQRDSVGSQQGVAHYREAKCAYDRQVDVHSHWLGLAMLLIIIGLAADGMGYSEG
                     RKTLIAWTLLLGSFLFPLGVLIQTFSHGPWPRAIAIAASGMVIVALCLASLGFLRPRP
                     A"
     gene            complement(6653..7756)
                     /locus_tag="VE783_08120"
     CDS             complement(6653..7756)
                     /locus_tag="VE783_08120"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53404.1"
                     /translation="MAAPDTLMLDRGELARNFAPLSSRRLLVLAGIAMILAGMIFGDI
                     FAIFILHENAARAGGSLGTAVNAALHGIAGPVGPQLAESGKFLENRGTKVDTHVHLIG
                     FGYLALMLGIIQPWVRLSERTKKRAAWLFVCGAVLLPVGVFLIHYVGLAYSPLNAMGW
                     ASIFADLGGLMVLLATAWFLHRLRSRSDVNASLLQPASTSTGRVLFAGGVLLVVIGFL
                     HGAFYAGVDLYRQEEADYNILSRLNVAAQTQNRTALDSAMRDYGQLQADRAVKIAAHA
                     HVIEFGFLAMLLAFFQPYVQLSREWQKRWACVMLAGSVMLPVCVLMELRFGLIAGGLA
                     DFGGLLVITALCAMWIGILRYTGKIDAMTGVAQ"
     gene            complement(7765..8160)
                     /locus_tag="VE783_08125"
     CDS             complement(7765..8160)
                     /locus_tag="VE783_08125"
                     /EC_number="3.5.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012429996.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HYX53405.1"
                     /translation="MKILQPPDWPRPKGYSNGISARGQLVFVSGIVGWNQQGEFVAMD
                     FAGQVDQALQNIVAILKEANARPEHIVRITWYVLDKNEYMGSTQEIGTSYRTIIGKHY
                     PAMTVVQVAGLVEENARVEIEVTAVIPES"
     gene            complement(8191..8649)
                     /locus_tag="VE783_08130"
     CDS             complement(8191..8649)
                     /locus_tag="VE783_08130"
                     /EC_number="3.1.2.-"
                     /inference="COORDINATES: protein motif:HMM:NF024675.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioesterase family protein"
                     /protein_id="HYX53406.1"
                     /translation="MAEGRAISPKDEVSDPSFRTEVHVRFEDCDPAGIVFYPRFLVMF
                     NNLVEQWWQQGLEFSFHELVIQNRWGIPTVHLEVDFYRPSTLGDVLSANLYVHSLGRS
                     SVKARIVLAGQDGEVRVKGNVVLVLMDLNEGRAIPFPDWLRERIQAFVKD"
     gene            complement(8642..>9212)
                     /locus_tag="VE783_08135"
     CDS             complement(8642..>9212)
                     /locus_tag="VE783_08135"
                     /inference="COORDINATES: protein motif:HMM:NF012656.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HYX53407.1"
                     /translation="IEVMAPHPLARLAFKDCRIHKSQLVGEEGQGFKIAMSTLDIFRS
                     SVAAAALGYARRALQEALRRSTGRKMFGQMLSEFQLTQAKIARIATDIDSAALLTYRA
                     AWLRDRGCAVTTEAAMAKMTATEIAQHAIDDAVQIFGALGVVADQVVEQLYREIRPLR
                     IYEGATEVQQLIIGRGIIKGYQESERERG"
BASE COUNT         2029 a         2781 c         2483 g         1919 t
ORIGIN      
        1 caatcaccca atacgtcacc ggaagcgtgc tattgccgta gccttccgtg ccgttgaaga
       61 tcaatgccag caggcagttg agtcccccgg caagcataat gatcacaaag ggtatgctca
      121 ccagcatgcc gcgcatgtgg attctgagtg actgaaacgc ctgcgaccac gccgctcgtg
      181 ttacatgcgg gttcagaacc ggacggccaa ccgcaatggg ctgggcctgt gactctggct
      241 ccaccggcac ggctttagaa gctttctccg tgaagctgaa ccggaaatac gagaacagaa
      301 aaataatggc cgcgattacg atccatagca ggcggttcca cagcatcagc ccgctgaaag
      361 ccactggaag actgttcttg tcggccaccg tccaatattt gcttacgatg gcaaaggttc
      421 tgatcccaaa cggatccgca aagattgcgt attcctcatg gcgcaggtcc tgcagcagca
      481 cgccggcggt tatgtagccg atcaagagaa cgattgcgcc gatgaacggt atcacctcat
      541 tgcgcgccag cacggctatc gcatacagga tggccgccat gatcagcgca ttaggaatgg
      601 caaagaccaa tatcgcatgc cagtgggctg cccagttcac cgggccccac tgctccggat
      661 caatccaggg catatatttt gccgccagaa tgcccaacga gaccccgagc atgggaatga
      721 tcgagacgag tgtggcgcca atgaaccggc ccagcaggta atcccgcctg cgcatgggcg
      781 tggagaagac aatctggttg gtattgaagc ggaaatcgcg cagagcagcc gagttcacaa
      841 aggctgccgc cattagcagc atgaaaagtg tgagcagtga ataatagctg ctgatcaccc
      901 agggcgcgtt gtgaaacgta ttcgtgaggg tgatgaatag cgtcagattt ggcgtgctta
      961 cggcggcgaa gaccgccagg gcaatgacgg ccagaaatac ccacaacatc tttgaccgca
     1021 gccagtaaga aacttcaaac caggtgatct gccagaacat agcggtctct ccttagctcc
     1081 agttccgtat cttggcaaaa aacacgtctt ccaggtccgc ctcgtgcgag acgaacccat
     1141 ctcccggcgg ctgctctccg tagacgtgca ggaacgggcg tccgccaacc agtttgttgg
     1201 aaaccacacg gaacgtctgc tcgtaatggg ccagttctgc cttctcaatc gtccggtgcc
     1261 agatgcgtcc gttcaactcc cggatcgcgg ccatgggctc gccctggtat agcactttgc
     1321 cctgatggat gatcgccata ttggtgcaaa ggtccaccac gtcttccaca atatgcgtgg
     1381 agagaatcac aatcacctgc tcgccgactt cggccagcag gttgtaaaag cgattgcgct
     1441 cgcccggatc aaggccggcc gttggctcat ctgctatcaa cagctgggga tttccaatga
     1501 gtgcctgggc aatgccgaat cgctgcctca tgccgccgga atagcccgtc agcgctttct
     1561 tgcggtcgtt atataggttg cagcgatgca acatggcccc caccgcttcc ttgcggtcct
     1621 ttgcgttagt aatccccttg agcagcgcca gatggtcgag catgtcctgg gcggaaatcc
     1681 gcggatacac tccaaactcc tggggcagat accccaggcg gcggcggacc tcgtccttct
     1741 gcttgagcat gtcaatatcg cccagccgcg cgctgccggt gtcaggctcc tggagcgtag
     1801 ccagcgtccg catcagggtc gacttccctg ccccattggg gccgagcagg ccgtacatgc
     1861 catgcggaat tgtgagtgaa acgttatcca gcgccttgac gccgttttta taagtcttgg
     1921 aaagattttc tatgcgcagt tccatagtag ttcccttgtt ttacgcagcg gcgcccggca
     1981 aagtttcagg gacggcacgg atttaggaca gagtttttga ttttgacgtg cttcaggaac
     2041 gcccgtgagc gggttctttt gcgtcctcag gactaactga ggtcgctttg ttgttctgga
     2101 acatgacctt caccggatgg ccaccgttgt tgtactcgat ctcccggttg ccgtaatccc
     2161 cggtccccac gcttccgctc gtgcccaggg caaagcccac ctgcaactca ttcatccccg
     2221 gtttggcttc gtgatggtca atggccgccc aggtctccgc aggccaatgc ttgtaaagct
     2281 ggtggggatc cacaaagaac aaagtatcgt tggccgttac gttgaaatca tcgccgttca
     2341 cagttgcaat ggaaaccgcc tccggcgcag agcttccttc acgcttgtaa accgcgaatg
     2401 cctgcttctg caccaccgca acttcgcctg ctttaagctg tgcaggaatg cgctggacga
     2461 ttactttctg gatgtccagc ttctccagcg ggggcagcag ccctttctga tgcttcagct
     2521 ccgcttcccc tgcggttgca ttgaaggagt agtaggggac tgcccacccg gcgcgcaccc
     2581 aaaccggttt tccggcaagc tctttatcag ctgatttcag gtcgtaggca tagatctttg
     2641 gaacagatac gtaatcatcc gcattcgtgg aatacgtcgg tttgttttca ttagggttgg
     2701 ccggctgctt gcgctcataa aaaatccacg ctattcgcag cccggccaga accagtgcga
     2761 ctattaagaa tatctgcagg cgcttacgcc aatctgaatc catggtgagt tatcttacac
     2821 gccgcagtac ttcatcccgg cctccgcgat ggatccctaa gagtacaggc ccgccagggc
     2881 tgcccatcat cctgccttag aagggcgcca ggccagccac gccccgtctc tcacctcacc
     2941 agcagttaga ttttcacgat cttattcgcc gccagcacca atcccagtgt tatcgccgcg
     3001 atcaccactt ctccaatcgc gcccaccaga aacggtcgca agccctgttt cttcatgtcg
     3061 cggaagttga tcttcaatcc cacgcccgcg aaggtcagca ggaacgccca ttttgaaagg
     3121 ttcgcgatgc tggaaagctg atcgtgggta aagaaactca cgcttgccag tgccgagacc
     3181 agcagaaaac cgagaacaaa cttggggaac ttctgccaca ggaacgcggc cttgttcccc
     3241 tgcacactcc tgccttcccg ggctgcccag taaagcgcat atgccagcac cacaaatcca
     3301 atcagtgcgt tccgtgtggt tttggccagc acggctattt tggctgccgc gtccgagtac
     3361 agcgcgccgg cggcaacggc ttcggctgtg ttgtccactc cggttccggc ccacagccca
     3421 taaacatgat cgctcatgcc cagcgcgtga ccgatcgatg gaaaggtaaa cagcgccaga
     3481 gcgccaagcg ccagaatcgc ggcaatcgcg aaggaggcat cttcatcatc ggcatcgatc
     3541 gcacccttgg tcgcgataat cgccgatacg ccgcagattg atgaacccac cgcaagcagc
     3601 gttgtgagtt tgggactcag cttgaaaacc cggcccagca cagtcatgag cccaatggag
     3661 agtgccagtt caatgagcac aagcgccagg ctgacagcgc cgagcttgaa aacgtccccc
     3721 aggatgaagc gcgaccccag cagcacgatg ccgctcttca gccagaactc gtaggtcgcg
     3781 attcctggct tgaatacctc ggctactccg aacacgttgg atatgaccag ccctatcccg
     3841 atcgcccaca gcacatattc gacatttggc agcaccaggt ggtgggcttt gctgtaccgg
     3901 gcaatgccct gctccagcac ctttccaccc atgccgacga tcgcgagcag tgcgatgccc
     3961 ggaaccagac tgactaatct ccgcggccat gaaaacgact gcggtgcggt gagtacttgc
     4021 gaacttgcca tattttgtct gtccttttct accaggtgat gtacttcagc agcccgatac
     4081 ggaccaggcc ggcaaggctc agggccagga ttactgccca tgtgtcgagc gaaagtatgg
     4141 ttctgcgggt gggtttggct gagtcggtgc ttgccatggc gattcctttc tggtttttaa
     4201 cttttcggcg caaaataaaa aacccactca ccgctgtgag tgggttttag atgaaaacga
     4261 ttgactaaaa ctttagattg gccactcgcc agcaaaattg gacacaacgg cgcaacaaca
     4321 tgcgcacatc atccgcatct ggcaagagcc cttcatgaga tcgaaatcct acagtcagat
     4381 tcacgccgct gtcaaacggc gcaatgaatt gtgggggttc tgtcgtctca agttcagtgg
     4441 cgtcgcttgg tctctttgat cacgataccg aagcttctgg cgccgaagct gaaaccctgc
     4501 tgcaccacac cggtcaccgc aaccttgctt ccgttggatg ggacgccata agcctggcta
     4561 tagacccaca tggttccgga gccgtcatcc agctggaaaa cgccgttgct gaaggcgcca
     4621 aaagattgag acgtcttccc tgcaatggtc acttcttttc cggcgtagcg gcctgggtcc
     4681 ttgtttatat cggaaatttt tgttcgtgta gggcagccga gcagcgtaag gatgaccagc
     4741 gttcccaaga ttccgagcag tgcgcgtttc ataggtgtaa gagcagctcc cggtgaatgg
     4801 aatagaccgg cgcaagcgcg agtgaactcg cgccgggcag cactaagcaa ttgttgtata
     4861 tcaaccccgg actcaaatgg aactctcgcc ttagttactg cgacgacgag acgcaactct
     4921 tccgggcctt accaccgctt ataggaagtg ttaggcgaaa aaagagtggc ctccacgtga
     4981 tcaccctcac atccccgctg cgtaaaagtg tctactctgt tttcaacgcc gagaagccct
     5041 tgatcggcgg ctgggggacg tacaagtggc agttctaccg tggacaccgc atttcaagct
     5101 tttcccgaaa gatggctcac ctggcgatga atatcgcatt cacagcggac gcgtcgaggt
     5161 ccgggccctg ggcccggatg gcgaacctta caaaggctac agcgaatgga tcgcgctgac
     5221 gccgcaggaa atcaagcttc actttgtcag gagcactccg gtggcctcct ggctgcgcga
     5281 agtgttaagt gatcccaaac ccagggccgt ggaagccaca caggcaagct agcttcagct
     5341 cagcgtgcaa ccacaccgtt gctgttcgcg gtgatctggt tgcgcagctc ccatagctcc
     5401 cggtaggcaa tgtgctgcat gcgctgttgc agcacttcta ccggtgtgcc catggtgcca
     5461 aggactccgc cgccgatgat ccgctgcgcc agcttcaggt ggtggaagcg gaaaacctgc
     5521 atgcgctcgt caaaatcgag catgcgctcg gccacgtcgt gcagcccgaa gaactcctgg
     5581 tggcggcggt agatgtcgtc gaccgtcagc cctttggcgc gcaactgctc ctggaacgca
     5641 tcaccgatgc gcggcgcaat gtgcagcagc gccagaaatc cgggcgagtc cagtccgctg
     5701 ccatggccca ggccggcacg gatgacgtgg tagtcgtagg gggtaatggt ttcaagcaca
     5761 tgcagcagct cgataggatg ctgcagcatg atgttcgccc ggcgcatcag cctcgccgcg
     5821 ttagggcaat cgctctctgt gatcgccacg cgcgcccgct ccagttccca tgccgcgccc
     5881 ttcatgagca gttcagacga ttggtggacc acctggaacg tcagctcatc cgggtgcgaa
     5941 agctcatcca tgggagtctg caatgacagc agatcgtcag tgcgcagata gcgctcatag
     6001 tcagtgtttc ccttgccgga caagatcggc ttttgcatct cattcatgga ctgcttttac
     6061 tcctcaggct ctgaaaatgg cggggggtaa cccgggcgtc cgccatatga ataaatcact
     6121 actctttacg atacatgaaa gtggaattgg ggatttctgg ttggctcgcg tcaggcgggg
     6181 cgaggtctga ggaaacccag cgacgccagg cacaatgcaa caatcaccat gcctgacgcg
     6241 gcgattgcga ttgcacgcgg ccacgggccg tggctaaatg tctgtatgag cacgccgagg
     6301 ggaaacagaa atgagcccag caggagcgtc caggcaataa gtgtctttct gccttcggag
     6361 tagcccattc catctgccgc caggccaatg atgataagca gcatggcgag cccgagccaa
     6421 tggctgtgga cgtccacctg acggtcatat gcgcatttgg cctcacgata gtgcgcgacc
     6481 ccttgctggg aacccaccga atcgcgctgc gcagcagcag tgaatgtctt caccagtgaa
     6541 gcgccgatgc tatccagcgc ctgatgctcg gcaaagaccg cataccagag cccgtaagcc
     6601 ataccaataa cagccaatgc aatgccgccc gcgatcagga gtgctttggc gttcattgcg
     6661 caactccagt catcgcatca atctttccgg tgtagcgcag aatgccgatc cacatcgcac
     6721 acaatgcagt gatcaccagc agcccgccaa agtcagccag gccaccagca atcaatccaa
     6781 aacgcagctc catgagcacg cagaccggga gcatcacgga tccggcaagc attacgcagg
     6841 cccatcgctt ctgccactcg cggctgagtt ggacatatgg ctggaagaat gccagcaaca
     6901 ttgcgagaaa gccgaactca atcacgtggg cgtgcgcggc tatcttaacc gccctatccg
     6961 cctggagttg accgtagtca cgcatggctg aatccagcgc ggtccgattt tgcgtctgcg
     7021 cggcaacgtt caggcggctg agaatgttgt aatccgcctc ttcctggcga taaagatcca
     7081 cccctgcgta gaacgcaccg tgcaggaatc caatcactac cagaagcact ccgccggcga
     7141 acagtacacg gccagtgctt gtgctggctg gttgcagcaa tgaagcgttg acatcgctgc
     7201 gcgatcgcaa acgatgcagg aaccatgccg tggccagcaa caccatcagg ccaccaagat
     7261 cggcgaagat actcgcccag cccatggcat ttagcgggct gtaggcaaga cccacgtaat
     7321 ggatgagaaa gacgccgacc ggcagcagca cagcgccaca gacgaacagc caggcagcac
     7381 gtttttttgt tctctctgac agccgaaccc acggctggat gatcccgagc atcagcgcca
     7441 gatatccaaa cccgatcagg tgaacgtgcg tgtccacctt ggtgcctcgg ttttccagaa
     7501 attttccgga ttcggccaac tgcgggccga ctggccctgc gatcccgtgc agcgccgcgt
     7561 tcaccgctgt tcccaggctg ccgccagcgc gggccgcgtt ctcatgcagg atgaagattg
     7621 cgaagatgtc gccgaagatc atcccggcca gaatcatcgc tatacctgcc agcaccagca
     7681 gccgtcgtga agagagcggg gcgaagttgc gcgccagttc gccgcggtcg agcatcagag
     7741 tgtcaggtgc tgccataaac agctttagct ctccggaatg actgcggtca cctcaatctc
     7801 gacccgtgca ttctcttcca ccagccccgc cacctgcacc accgtcatcg ccggatagtg
     7861 ctttccgatg atggtgcggt atgaagtgcc gatttcttgc gtcgaaccca tatactcgtt
     7921 cttgtccagt acgtaccacg ttatgcgcac aatgtgctcc ggccgagcat tggcttcttt
     7981 cagaatggca acaatgtttt gcaatgcctg atccacctgc ccggcgaaat ccatggccac
     8041 aaactcgccc tgctgattcc agccgacaat tccgctcaca aaaacgagct gcccgcgggc
     8101 agaaatgccg ttggaatagc ctttcggtcg cggccagtcc ggtggttgaa ggatcttcat
     8161 tcgtcgcctg ccctcattgt tgccgtgtct ttaatccttt acaaacgcct gaatgcgctc
     8221 gcgcagccag tccggaaacg gtatggccct tccctcattc aggtccatga gcaccagcac
     8281 cacattgccc ttcacccgta cctctccgtc ctgtcctgcc agaacaatgc gggctttaac
     8341 cgagctgcgt ccgagactat gcacatacag attggcgctc aatacatcgc ccagcgtgct
     8401 gggccggtag aaatcaactt ccagatgcac cgtgggtatt ccccaccggt tctggatcac
     8461 caactcgtga aaggaaaact ctagcccctg ctgccaccat tgctccacca ggttgttgaa
     8521 catcaccaga aagcgcgggt agaacacaat cccggcgggg tcacaatctt caaaccggac
     8581 atgcacctcg gtccgaaatg acgggtcgga tacttcatct ttgggtgaaa tagcccggcc
     8641 ttcagccacg ttctcgctcg ctttcctgat accccttgat gatgccacga ccaatgatca
     8701 actgctgcac ctccgtcgca ccttcataaa tgcgcaacgg acgaatctcg cggtaaagct
     8761 gctccacaac ctggtcagcc accactccga gcgcgccgaa gatttgcacc gcgtcatcga
     8821 ttgcatgctg cgcgatctcg gtggccgtca tcttggccat cgcggcttct gtagtaactg
     8881 cgcacccgcg gtccctgagc caggctgcgc gataggtgag cagcgccgca gagtcaatgt
     8941 cggtggcaat gcgagcaatc ttagcctggg tcaattgaaa ttccgagagc atctgaccga
     9001 acatcttgcg cccggtggag cgacgcagag cttcttgcag cgcgcgacgc gcgtagccga
     9061 gagccgccgc ggctacggag gagcgaaaga tgtcgagcgt ggacattgcg atcttgaatc
     9121 cctggccctc ttcacccacg agctgcgatt tgtgaatgcg gcaatccttg aacgccaggc
     9181 gcgccagcgg atgcggcgcc atgacttcaa tg
//
LOCUS       DASQYP010000251         4764 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_94519, whole genome shotgun sequence.
ACCESSION   DASQYP010000251 DASQYP010000000
VERSION     DASQYP010000251.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 4764)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4764)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4764
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_94519"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..394
                     /locus_tag="VE783_08140"
     CDS             <1..394
                     /locus_tag="VE783_08140"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53408.1"
                     /translation="TAANRDIVGASTKLNKPISVTLDNTGDLVVSNQGGSITVYANAA
                     TASGNQAPAGTVTGATTTLVTPAQVIRNPVGTSNEVYVADTTGNEVAVFSGISTANGA
                     PAPARKIAGPTTTLTGTSARGVALDTTR"
     gene            complement(499..1026)
                     /locus_tag="VE783_08145"
     CDS             complement(499..1026)
                     /locus_tag="VE783_08145"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53409.1"
                     /translation="MQSIKIILACLISDIFYGILHDQFTAYICVEYFSVFHPPVFNTE
                     SPFLLALGWGVLATWWMGAFLGVLLALSSRAGSRRKTAVAELVRPIMKLLVAMACAAF
                     AAGCLGYALSRSGAIAPPEPIASVLPQSRHARFMADWWAHKASYFVGFFGGMVLCVIT
                     FRKRRRALSALETGR"
     gene            complement(1442..>4764)
                     /locus_tag="VE783_08150"
     CDS             complement(1442..>4764)
                     /locus_tag="VE783_08150"
                     /inference="COORDINATES: protein motif:HMM:NF013508.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="MBG domain-containing protein"
                     /protein_id="HYX53410.1"
                     /translation="FLSSGTDANVVLLSPDNTKLFTSDQLDNNVTSFSVAADGSLAKI
                     GAYGTPASLHVPTGLVTDAVGRYLFIADDTYGLAVFTINGDGSLVPLNDNATIPGQEM
                     QSVAVYPGRSCASADLGLTMTADSSTVESGSNVTYTISITNNGTADAGAVISDVLPVG
                     ASFVSCSASGTGVCSGNFNNPHTITFSTITGGTTETVSLVAQTSTNLLNGAVLVNSAA
                     ITNRSVIDSNPANDAASASITITATPGPTTLSLSPAAGPFAGTAALTATLLKQVNGVG
                     ISGKPIAFTVNGNSVGSATTNLAGQAILNVNLAGMALGPYPVTASFAGDTIFQGSSTA
                     GTLTVGKALLTVQPGSLTRAYGDPNPASYAYVMTGFLNSDTTSVVSGSAVCTTTATQT
                     SPVGIYPVTCDISGLSAANYVFTVLPGTLMITPAPLTIKADSQTRIYGDPNPVLTGTI
                     TGLKNSDVITANYTTQATPASPVGTYPIVPSVVPSAAAANYTITLIDGTLTITRASLT
                     VNVNDASRFYGDPNPPFSGTLVGLRNGDGITGIYSTTATQLSPVGSYPITAALLDPNV
                     KLGNYTVTINNGTLTIVPAPLTVTVASASRVYGSPNPVLTGTISGLKNADVITATFST
                     TAVIGSTVGNYPITAALVDPAGKLANYAVSIIPGVLTITPAPLTVAINNASRAYGANN
                     PTLNGSITGLKNGDSITATYSTAATAASVVGSYSITPNFNDPGNKLGNYTVTISGGVL
                     TITPAPLTVIAVGGSRLYGDPNPAATIAGLVNGDAISVTYTSPTAVSPVGTYTLNPVL
                     VDPAGKLPNYAVTIKSATLIINKAPLTVTASNATRVYGSANPVFSGTISGIKNGDNLT
                     PNPTTAATPSTNVGNAVIAAGVNDPAGVLGNYAVTATNGTLTITPAPLTITANNQTII
                     LGGTVAPSASYSGFVLGQTSANLSGTLSCSATKGTGNVGSSAINCSGQSSTNYSIAFA
                     PGTATVIYQVAGVSCTAGPGHVILSPIANTTAFTKASTPTIPVQFRVCDVKGASIGSA
                     GVVSSFVLTSVNGVSASTPAPQGGPFSFVGGTLANGAGSAGWQFNLSTSNLAAGNTYG
                     YQINLNDGTNITFQIQLQ"
BASE COUNT         1043 a         1298 c         1432 g          991 t
ORIGIN      
        1 cactgccgcc aaccgcgaca tcgttggggc tagcacaaaa ttgaataagc ccattagcgt
       61 gacgctggat aacacaggcg acctggttgt ctcaaatcag ggcggcagca tcaccgtgta
      121 tgccaatgca gcgacggcgt ccggaaatca ggcgccggcg gggaccgtta ccggagcgac
      181 gaccactctt gtgactccag cacaggtgat ccgtaatccg gtgggtacct cgaatgaagt
      241 ttacgtggcc gataccaccg ggaacgaagt agcggtattc agtggaatca gcacggccaa
      301 cggcgcgccg gcgccggcca gaaaaatcgc agggcccaca accacgctca ctggcacgag
      361 cgcgcgggga gtggcgctgg ataccacgcg ctaactcccg aggctgcgcc gcagaccggg
      421 tacgtaaatc gcgcccgccg gcccagcagt ccttttgcgg cagggcttta tctcactgtc
      481 cgcgctgagc gagctgagtc atcgtccggt ctcaagtgca gacagcgcgc gcctcctctt
      541 gcggaacgta atgacgcaca gcaccattcc tccgaagaac ccgacaaaat atgaagcttt
      601 atgcgcccac caatcagcca tgaatcgcgc atgtctactc tgcggcagga ctgaagctat
      661 cggttccggg ggagcgatcg cgcctgaacg agacagtgcg tatccgagac atcctgcggc
      721 aaaagcagca caagccatcg ccacaagcaa tttcatgatc gggcgcacaa gttcagccac
      781 agcagttttt ctacgcgatc ctgcacgaga ggataaagca aggagaacac cgagaaaggc
      841 tcccatccac catgtagcca gtactcccca tccgagcgca agcaaaaatg gcgattccgt
      901 gttgaagacg ggcgggtgga agaccgagaa atattcaacg cagatatagg ccgtgaactg
      961 gtcgtgaagg atgccgtaga aaatatcact tatgaggcac gccagtatga tttttattga
     1021 ttgcatccct tgttgattct aaggagttac agatgaataa caaggccact gttctcaaca
     1081 ggagattaca cttaggaccc agcccttcgc agacgaaggt gcattccaga cacgcgcttc
     1141 ctgggcggaa cagtctgttg tcaccgtttc cgtgatgcga ttgccttaga tcagaaaagg
     1201 ctgccgcact tgacgccagc cctccgggtg ttgatcgtat ccagaccggc ccggacggcg
     1261 gccgtgctat gagagcagct ccatttagct gggcgagtga acacgttgcg gggacgtggc
     1321 gacacgaagc ctcccttatg cgatcaatac cgtgcattgc tttgacccgt gaggtcggct
     1381 cagcaacaca ctttggatga acaaactggg gagcgacagt tagacactcc ccagggttga
     1441 actactgcaa ttggatctgg aacgtaatgt tcgttccatc attgaggttg atctggtagc
     1501 cgtaggtatt gccggctgcc aggtttgaag tggagagatt gaactgccat cccgcggaac
     1561 ccgcgccatt ggcaagcgtg ccgcccacga aagaaaacgg tccgccctgc ggggccggag
     1621 tgctggccga gactccgttc accgaagtca acacgaagct cgagaccacc ccggcagaac
     1681 caatggaagc tcctttcacg tcacaaacgc ggaactgcac cgggattgtg ggcgtgctgg
     1741 ccttggtgaa ggccgtggtg ttcgcgattg gcgaaaggat cacgtggccg gggccagcag
     1801 tgcaactcac tcccgcaacc tgatagatca ccgtggccgt tccaggagca aaggcgattg
     1861 agtaattggt ggaactctgg cccgagcaat taatggctga agatccaaca ttgcccgttc
     1921 ccttggtggc gctgcaactc agggtgccgg aaaggtttgc cgaagtctgg ccgagcacaa
     1981 atccgctata gctcgctgaa ggagcaactg tcccacccag gatgatggtc tggttattgg
     2041 ccgtgatcgt cagcggagca ggggtaatgg tcagcgtgcc gttggtggca gtcactgcgt
     2101 aattccccag gacacctgca ggatcattta cgccggccgc gatcaccgcg ttgcccacat
     2161 tcgtagacgg agtggctgcg gttgtcgggt tgggcgtgag attgtcaccg ttcttgatcc
     2221 cggaaatggt tcctgagaac acggggtttg cgctgccata tacgcgcgtt gcattacttg
     2281 ccgtgaccgt cagaggggcc ttattgatga tgagagtggc tgacttgatc gtcacggcat
     2341 agttaggcag tttgccggcg ggatcgacca gtaccgggtt gagggtatag gtacccaccg
     2401 gactgacagc agtcgggctg gtgtaagtca cactgatagc atcaccattc accagacccg
     2461 caatggtagc cgccgggttc ggatcaccat agagccggct tccgcccaca gcaattacgg
     2521 tcagaggagc aggcgtaatc gtgagaactc cgccagagat cgtaactgtg tagttgccaa
     2581 gcttgttgcc gggatcatta aagttcgggg taatagaata gcttccgaca acgctggctg
     2641 cagtcgcggc cgtggagtaa gtagccgtga tgctgtctcc attcttcaga cccgtgatgg
     2701 agccgttgag cgttggattg ttcgcgccat aggctcgcga agcattgttg atggcaaccg
     2761 tgagcggcgc cggagtaatg gtgagaacac ccgggataat gctcacggcg tagttggcca
     2821 gcttccctgc cggatcaact aatgcagccg tgatcggata gttccctacc gtacttccaa
     2881 tcactgctgt ggttgagaac gtggccgtaa tcacgtcagc attcttcaat ccggagatgg
     2941 tcccggtaag cactggattc gggcttccat agacgcggct ggcgctggcg actgtgaccg
     3001 tgagaggcgc gggaacgatc gtgagcgtac cgttgttgat ggttaccgtg tagttgccca
     3061 gtttcacatt cggatcaagg agcgccgccg taatcggata gctgcccacc gggctgagtt
     3121 gagtcgccgt cgtggaataa atcccagtta tgccgtcacc attgcgcaag cccaccagcg
     3181 ttccgctgaa gggtgggttc ggatcgccat agaagcgcga tgcgtcgttc acattcaccg
     3241 taagcgaggc gcgcgtgatc gtcagcgtcc catcgatcag agtgatggtg tagtttgcgg
     3301 cagcggcgct gggaaccacg gaaggcacaa ttggatacgt ccctaccggg ctggctggcg
     3361 ttgcctgggt cgtatagttg gcggtgatca cgtcactgtt tttcaagccg gtgatcgtgc
     3421 ctgtaagaac cggattggga tcaccataaa tccgcgtctg gctgtcagct ttaatggtca
     3481 gtggcgctgg agtgatcatc aatgtcccgg gcagaaccgt gaacacataa ttcgcggcag
     3541 agagccctga tatatcgcac gtcacaggat agatccctac cggactcgtc tgggtcgcgg
     3601 ttgtggtgca cacggcggag ccgctgacca cggaagtagt atctgagttc aggaagccag
     3661 tcatcacata cgcatagctt gccggattcg gatctccgta agcgcgcgtg aggcttccgg
     3721 gctggactgt caggagagcc ttaccgacgg tcagagttcc ggcggtactg cttccctgaa
     3781 aaatggtatc gcctgcgaag ctggccgtta caggataagg accaagagcc atgccggcca
     3841 aattgacatt cagaattgcc tgtccggcaa ggttcgtggt cgctgagccg acgctattcc
     3901 cattcaccgt aaaggcgatt ggcttcccac ttatgcccac accattcacc tgcttgagca
     3961 gggtagctgt gagagcggca gttccggcaa acgggccggc cgccgggctc aatgaaagag
     4021 tcgtcggccc tggagttgcg gtgatcgtga tgctggcgct ggcagcatcg ttcgccgggt
     4081 tggagtcaat caccgaacga ttcgtgatcg cggccgagtt gaccagcacc gctccgttca
     4141 gcagatttgt gcttgtctgt gccaccaggc tgaccgtttc ggtcgttccc ccggtgatgg
     4201 tcgagaacgt gatcgtgtga gggttgttga aattcccgct gcatacgccg gtcccgctgg
     4261 ctgagcagga gacaaaagat gcgcccactg gaagaacgtc actgatgact gcacctgcgt
     4321 ccgcagtgcc gttgttggtg atggaaatgg tgtaagtaac attggagccg gactcaactg
     4381 tcgaggagtc ggccgtcatg gttaagccca ggtccgcact cgcacaactt ctgcccgggt
     4441 agacggcaac actctgcatt tcctggccgg gtatcgtggc attgtcattc aggggaacga
     4501 gcgatccatc tccgttgatg gtgaataccg ccaggccata cgtatcatca gcaataaaca
     4561 gataccttcc gactgcgtcc gttacaagcc cggttggtac gtgcaaagaa gcgggcgtgc
     4621 catacgcgcc aatcttcgcc aggctgccgt ccgcggccac gctgaatgag gtaacgttgt
     4681 tatcgagctg gtcgctggtg aagagctttg tgttgtcagg cgagaggagc actacgttag
     4741 cgtctgtccc ggagctcagg aatg
//
LOCUS       DASQYP010000252         9862 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_94576, whole genome shotgun sequence.
ACCESSION   DASQYP010000252 DASQYP010000000
VERSION     DASQYP010000252.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 9862)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9862)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9862
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_94576"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            197..772
                     /locus_tag="VE783_08155"
     CDS             197..772
                     /locus_tag="VE783_08155"
                     /EC_number="4.1.3.27"
                     /inference="COORDINATES: protein motif:HMM:TIGR00566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004049 - anthranilate synthase activity
                     [Evidence IEA];
                     GO_function: GO:0046820 - 4-amino-4-deoxychorismate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0000162 - tryptophan biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminodeoxychorismate/anthranilate synthase
                     component II"
                     /protein_id="HYX53411.1"
                     /translation="MVFVLDNYDSFTYNLVQYLGELGQEVEVRRNDQVSITEIEQLNP
                     SHILVSPGPCTPQDAGISIELIRHFAGKKPVLGVCLGHQAIGAAFGGKVIRAAKVMHG
                     KVSQVQHDNRTVFKGAPQPLTATRYHSLIVSQENLPPELEISAETREEDGTRVIMGLR
                     HKRYPVEGVQFHPESVLTDSGRLLLNNFLEL"
     gene            859..1182
                     /locus_tag="VE783_08160"
     CDS             859..1182
                     /locus_tag="VE783_08160"
                     /inference="COORDINATES: protein motif:HMM:NF018894.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0035438 - cyclic-di-GMP binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PilZ domain-containing protein"
                     /protein_id="HYX53412.1"
                     /translation="MAQPQPEKRSTRRFALELPVNVKLLADSQTEMTGQTRDVSSRGA
                     FIYLKSQIAEGIAIEFVMTLPPEITLADPIRVRCSGKVLRVEQRGQEQGVAATIDKYD
                     FVGED"
     gene            1209..2210
                     /locus_tag="VE783_08165"
     CDS             1209..2210
                     /locus_tag="VE783_08165"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53413.1"
                     /translation="MNRTLLLRFGAATLACLPAAMIAQQQQPKPIGELFAADDGTKLI
                     QPAGAGMSVVPGSELSAGVAPARLRLYRGGQVRICPRSTVSVNSGKFGLMFAMGTGNM
                     EVDYAVAQRGADFVITPDLSLQLSGPASYHFALGVNKKGDTCVKTAADNNGVILITEL
                     LGNSVYKTNIAENTVFRSGKLNANGALTEECGCPISVPATQAGAVTTPSPAPQQNQSG
                     EGTAVAGNAKDASAPLPADRPGQVHVEVDTPFVFRANPAGVKPYSVAKLNLASLPNVY
                     FLQEKVDPVVLLEKPAQVSVQSEAATPAPMEKAQKKEKEKKGFLGRVGGFFSGLFHH"
     gene            2322..3227
                     /locus_tag="VE783_08170"
     CDS             2322..3227
                     /locus_tag="VE783_08170"
                     /inference="COORDINATES: protein motif:HMM:NF015506.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015291 - secondary active transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TonB family protein"
                     /protein_id="HYX53414.1"
                     /translation="MSPLEPNKQAEAPVKPAAGDAPSVQQQVIKLKREQAADAQLTTL
                     FGGGYGQYRVRPENFLLSVVTHTAVVAAILWLFHVTIAPKLVEPKNTASIELAPYIPL
                     QVGKNGPSGGGGGDASKLKASAGTPPRAAKQQFTPPVVLQTQKSKLMVEPTVVADLKI
                     TPGPQIGDPLSKLMTPSNGTGIGGGIGSGDGGGVGSGHGGPGVGPGIFHIGNGVSAPR
                     AIYTPEPEFSEEARKSKYQGVVVLEIVVGADGRVRDPRVVRSLGMGLDEKAKEAVRNW
                     KFDPAKMNGRPVAVEMAVEVSFNLY"
     gene            complement(3303..3671)
                     /locus_tag="VE783_08175"
     CDS             complement(3303..3671)
                     /locus_tag="VE783_08175"
                     /inference="COORDINATES: protein motif:HMM:NF013427.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TraR/DksA family transcriptional regulator"
                     /protein_id="HYX53415.1"
                     /translation="MDKKKLDTFEKKLEERQQALRKAVSRTEEDGRIADSDQTQDIAD
                     RAASSYTKEFLFSQSNNERQLLNMVETALQRIREGSFGECVSCGNEINSKRLEAVPWT
                     RYCIECQEKKEKGLLEEAVE"
     gene            complement(4141..5616)
                     /locus_tag="VE783_08180"
     CDS             complement(4141..5616)
                     /locus_tag="VE783_08180"
                     /inference="COORDINATES: protein motif:HMM:NF025885.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54 dependent transcriptional regulator"
                     /protein_id="HYX53416.1"
                     /translation="MNPKNRVLIVDEDVVMAKYLATHLTRRNFEVAVASSSAEALRIF
                     RNFDPFLVLLDTASRDDSGSDTLQRLKQIKPALSIIVLSASRDPEIIFKASKLGADDF
                     VGKPVDPKELDVRISKVLDSQRLFGEVTQLREQVRRQTDFTMLFGTSPKMMEVKTTIE
                     QVADTTATVLIRGESGTGKEVVARMVYAESSRNEKPFVKVNCAAIPHELLESELFGYE
                     PGAFTGATRQKLGKFEQANNGTIFLDEISEMHPALQAKLLHVLQDHEFSRLGGKRDIQ
                     VDVRVLAATNKPLERAVEEGVFREDLFYRLNVVTIHIPPLRERREEIPVFLEYFLERY
                     SAHYGKHPPMFSDYAITRMMEYAWPGNIRELENLVKRYVIVGNEAQIIRELSTHKPIV
                     SSLSQPAGAATAASTHPPEQTPLRKGVDGAELEMPSLLEIGRRAAMQAEREAIERVLA
                     QTRWNRRQAAKILKISYKALLNKLKAMEEQSKIQTGKEEVK"
     gene            complement(5839..6567)
                     /locus_tag="VE783_08185"
     CDS             complement(5839..6567)
                     /locus_tag="VE783_08185"
                     /inference="COORDINATES: protein motif:HMM:NF018129.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GvpL/GvpF family gas vesicle protein"
                     /protein_id="HYX53417.1"
                     /translation="MAWYAYCIVEQQAFQNGIRSRRPVPVENLKGIADAQTFAYNSGE
                     FAVIVSEYIPTGDLGQTALLQHAHVVSECFKRTTVLPFRFGTVFDTDEALRRAVRLNR
                     KAFLEGVVKLKGKAEMHLKLLVKDGSLREALEEIELPATVGSEYLSKLREKAVRQRER
                     QTKARALSVQVHKIFDPLDQDVCCRKVDSGGMLIDIAHLIDHKKVEKYQNKYQMATRH
                     LPGVEVVMSGPWPPYHFITGKRSS"
     gene            7034..8158
                     /locus_tag="VE783_08190"
     CDS             7034..8158
                     /locus_tag="VE783_08190"
                     /EC_number="2.7.7.65"
                     /inference="COORDINATES: protein motif:HMM:TIGR00254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0052621 - diguanylate cyclase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sensor domain-containing diguanylate cyclase"
                     /protein_id="HYX53418.1"
                     /translation="MVPPESTKPAPYAPEKFVVEVFSELDQETIQKRWQHLNVVLRLS
                     MLTGLQMQLEATLNLLCDFTAEIAPFDKALIYFWDEGDDQMRLRLARGLGHTPGASEA
                     ASGTNVLNLWAVQYGRPLLISPGDHLQADSLLKAFGAATALCIPLFVNNRVIGSLQLF
                     SNRSNAFSQEDAQLLWIVALVSENLLTRDYANEGLLRFAFTDYLTGLRSRGYFEQQLD
                     LEFKRAERRRQKFSLLMIDIDFFKRLNDTFGHHVGDQMLRDVSSILVKDMREVDTVAR
                     YGGEEFVIILPETTESGAIYVAERLRRAVEQAKFFASTPSSVQHLTISIGLAVYDTDA
                     QFKRDLIEFADAALYAAKHEGRNRVVAYSALARRAKREVS"
     gene            8167..9453
                     /locus_tag="VE783_08195"
     CDS             8167..9453
                     /locus_tag="VE783_08195"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024831.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HYX53419.1"
                     /translation="MPNYHSGAAGSSTALSEGASSREPGKKSWRVIHACEYARDVLPV
                     IETQITAGMRPYIVTPQGAGAAEVYLSGRQQETLRPLSLLRSWQDVRNWRKSILDCNP
                     EYAADLVHAHSFAAGMAAVRNCSCVVYDVQAFIEELAIATGQCEAGSWMARSFRVAEQ
                     FILARAGAVVVHSGSMAEAAHERGAPSESIFVIPDPLPLQEGSISPFPQSPAAADGDA
                     ASAIAFFVPALHLTSDGKPDSESLSILKAFNAAADQLDSASLTLVVANDAQPAFISEV
                     PQLTQQGRVRFVESMARGWEVADIVVVPPSGLSLVEFRGANSLCLEAMIRGKAVIAAD
                     TPHNRDVSPEGRGCLWYTAGNATDLAARMAFMAENPAFRCALAQSALAFMQESRGPAE
                     LGRQYEDAYRHAASRRRTSGPGMNAAPNLFPATQAG"
     gene            complement(9458..>9862)
                     /locus_tag="VE783_08200"
     CDS             complement(9458..>9862)
                     /locus_tag="VE783_08200"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53420.1"
                     /translation="NLVRIVDALPSFYGVGVVTMMLNAKHRRLGDFVAGTIVVHETSD
                     RESAIFFNTPAVTEQVFPAAAQLTVEEAELIEAFLARRLDIPPAIRQQNAARIAHMLA
                     AKLNIAPDQRPADNENFLELLVKEFRNRARYR"
BASE COUNT         2147 a         2670 c         2894 g         2151 t
ORIGIN      
        1 ggcggctctc tcttcgtgat tgccggcacc acgttgacat tccttttcaa cggcattcac
       61 aactcctggg actctgtgac ctacgtcgcg gtgcatctca gggcacgcga caaagaaaag
      121 gaaaccagcc agacaagcta acctgcagtg tgggtgaggg agcggcgaga gctgcaaaat
      181 cgagtatcat cgcagcatgg tgttcgtgct cgataattac gattccttca cctacaacct
      241 ggtgcagtat ctgggtgagt tgggtcaaga ggtggaggtc cggcgcaacg atcaggtcag
      301 catcacagag atcgagcagc tcaatcccag ccacatactg gtttctccgg gcccctgtac
      361 gccgcaagat gcggggatca gcatcgagtt gatccgtcac tttgcgggaa agaagccggt
      421 tttgggagtt tgcctgggcc atcaggcgat tggcgccgca tttggcggga aagtgattcg
      481 tgccgcaaaa gtcatgcatg gcaaagtgag ccaggtccag cacgacaatc gtacggtgtt
      541 caagggagct ccccagccgc tcacggctac gcgttaccac tcgttgatcg tctcgcagga
      601 aaatttgccg ccagaactgg agataagcgc cgaaacccgg gaggaggatg gaacacgcgt
      661 gatcatggga ctgcggcaca agcgctaccc ggtggagggc gtgcagttcc atcccgagag
      721 tgtgctcacc gattccggac ggctgctgct gaacaacttc ctcgagcttt aaacgcaccg
      781 cgaagcagcg catttccaaa aaattgagct acaatctccg gcaactgcaa aacggcagat
      841 ctggagggcc caggagttat ggcgcaaccg caaccggaga agcgctccac gcggcgtttc
      901 gcgctggaac tccccgtaaa tgtgaagctc ctggcagaca gccagacgga gatgaccggc
      961 cagacgcgcg acgtcagctc tcgtggcgca ttcatttatc tgaagtctca gattgcagaa
     1021 ggcattgcaa ttgagtttgt gatgactctg cccccggaga tcacactcgc ggatcccatt
     1081 cgagtccgat gcagcggcaa ggtcctgcgt gtggagcagc gagggcagga gcagggcgtg
     1141 gccgcaacga tagataaata cgactttgtg ggcgaggatt aggccggtct ttccagtcag
     1201 gccgagaaat gaatcgtacc cttcttttgc gctttggtgc ggcgacactt gcgtgtttgc
     1261 ccgcggcgat gattgcccaa cagcagcagc ccaaacccat cggcgagcta tttgcggcgg
     1321 atgacgggac caaactgatc caacccgctg gcgcagggat gagcgtggtt ccgggttctg
     1381 agctttcagc aggtgtggcg ccggcgcgtc tgcgtctcta tcgcggaggc caggtaagga
     1441 tatgcccccg cagcacggtc agtgtcaatt ctggaaagtt cggcctgatg ttcgccatgg
     1501 gcacaggaaa tatggaggtt gattacgcgg tggcgcaacg tggcgcggat ttcgtcatta
     1561 cgccggattt gagcctgcaa ctctccgggc ctgccagcta tcactttgct ttaggggtaa
     1621 acaaaaaagg tgacacctgc gtgaagacgg cggcagataa caatggcgtg atccttatca
     1681 ctgaactctt aggcaattcg gtatacaaga cgaatattgc ggaaaacaca gtgtttcgtt
     1741 cagggaagct caatgcgaac ggagcactga cggaagaatg cggatgtccg atcagcgtgc
     1801 ccgcgacgca agccggtgca gttaccacac catctccggc tccgcagcag aaccagtccg
     1861 gtgaaggaac ggcggttgcc ggaaatgcga aggatgcgtc ggctccgttg ccggcagatc
     1921 ggcctggtca ggtgcacgtg gaggtggata cgccgttcgt gtttcgggcc aatccggcag
     1981 gagttaagcc ctattcggtg gcgaaattga acttagcgag cctgcccaac gtgtattttt
     2041 tgcaagaaaa ggtggaccca gtcgtactcc tggaaaagcc tgcacaagtg tcagttcagt
     2101 ctgaggccgc gacgccggcc ccgatggaaa aggcacaaaa gaaagagaaa gaaaagaaag
     2161 gcttcctggg acgggtaggg gggtttttca gcggactgtt ccaccactaa aacgatgggg
     2221 ttaggcgtgg aggattaggg tggtgctccg ggagtacagg tcaccccatg aacttttagg
     2281 aaacaaattc agcagcaagg cgtctatact ggtaggaagt catgtctccg ctcgaaccca
     2341 ataaacaagc cgaagcgccg gttaagccgg cagccggaga tgcaccatcc gtgcagcagc
     2401 aggtgatcaa gctgaagcgc gagcaagccg ctgatgcgca gttgaccacg ctgtttggtg
     2461 gcggctacgg acagtaccgc gtccggcctg agaatttcct cttgtctgtg gtgacccaca
     2521 ccgctgtggt agcggcgatc ctgtggcttt tccacgtgac gattgcccca aaattggtgg
     2581 aacccaagaa caccgccagc attgaactgg ctccctatat tccgctgcag gtgggcaaga
     2641 atggtcccag cggcggcggg ggcggcgatg ccagcaagct gaaggcttca gcgggcacac
     2701 ctccaagggc agcgaaacag caatttaccc cgccggtggt tctgcagacg caaaagagca
     2761 agctgatggt tgaacccacg gtggtggccg acctgaagat cacgcctgga ccgcagattg
     2821 gtgatccgct gtccaagttg atgacgccat ccaacggcac gggaatcggt ggcggaattg
     2881 gcagtggtga tggtggcggg gtaggctccg ggcatggcgg accgggtgtt ggccccggaa
     2941 tcttccatat cggcaatggc gtgagcgctc cgcgggcgat ttacacgccc gaaccggaat
     3001 tctccgagga agcccgcaaa tcgaagtatc agggcgtagt ggtacttgag atcgtggtgg
     3061 gcgccgatgg ccgtgttcgc gatccgcgtg tggttcgctc gctcggtatg ggcctggacg
     3121 aaaaggccaa ggaagcggtg cggaactgga agttcgatcc cgccaagatg aatggccgtc
     3181 cggtggccgt ggaaatggcc gtggaagtca gcttcaatct ttactgaaca acatccaact
     3241 cagagcaaaa aaggagatgc ggcctgcatc tccttttttg caattgcgat tttgatctcg
     3301 aactactcga ccgcttcttc cagcagtcct ttttccttct tctcctggca ttcaatgcag
     3361 tagcgcgtcc agggaactgc ttccaggcgc ttggaattga tttcattacc acagctcacg
     3421 cactcgccaa aactgccttc gcggattctc tggagggcgg tttccaccat gttcaggagc
     3481 tgtcgctcgt tattgctctg ggagaacaaa aattccttgg tataagaact ggcagcgcgg
     3541 tcagcgatgt cctgagtctg gtccgaatca gcgatccgac cgtcttcctc agttcggctt
     3601 accgccttcc gcagagcctg ctggcgttct tcgagcttct tttcgaatgt gtccagcttc
     3661 ttcttatcca tgtgcttagg aaaactagta atgttattcg ccattagagg ataccgtcaa
     3721 atttgagaac aagattagat gcaccagttg atcacgttgt tatgcggagg aggtctggca
     3781 gaattgacag gaggtaaata aaaaagcggc ctttacaggc cgccttgata aagaggcaat
     3841 tgggaaggag ggagtttctc aggaaaggcg atcgaagacg atgagctcga ggcaaaagcc
     3901 agcacgctcg aatcggagaa gacgaaaagc ttgggaaagg gttgaagtca ttgcgtaggt
     3961 tttggcctct ttcgtatgcc cgtattaaag caactctcaa accaaagagc ctgttgcgag
     4021 gggcgcagag gtcatgcgcc gatatccctt ttaaaaatag gtatttagat gggggtggag
     4081 agaagctctg ttaagaaatt tttgagctct gtggacgcct aatgtggtac gagagttcca
     4141 ctatttgact tcttccttcc cagtctggat cttgctctgc tcctccatcg ctttgagctt
     4201 attaagcaga gccttgtaac taatcttaag gattttggca gcttggcgac ggttccagcg
     4261 cgtctgggcc agcacccgct caatggcttc tcgttcagcc tgcatcgccg cacgacgccc
     4321 aatttcgagg agcgagggca tttccagttc agcgccatcg acgcccttcc ggagcggcgt
     4381 ctgctcgggc gggtgggttg aagcagcggt ggccgccccg gccggctgcg acagcgacga
     4441 aacgatgggc ttatgcgtgg ataattcccg gatgatctgg gcctcattgc cgacgatcac
     4501 gtagcgtttt accaggtttt ccagctcacg gatgttcccc ggccacgcgt attccatcat
     4561 gcgggtaatc gcataatcgc tgaacatcgg cggatgtttg ccatagtgag cgctgtaccg
     4621 ctccagaaaa tattcaagga aaaccgggat ctcttcgcga cgctcgcgca gcggcggaat
     4681 gtgaatcgtg acaacgttga ggcgatagaa caggtcttcg cgaaagacgc cttcttccac
     4741 agcgcgctca agaggcttgt tggtggccgc caacacccgc acatctacct gaatgtcacg
     4801 cttgccgcca agccgcgaga attcatggtc ctgcaggacg tgcagcagct tggcctgcag
     4861 cgcgggatgc atttcgctga tttcgtccag gaaaatcgtg ccgttgttgg cctgctcgaa
     4921 cttgcccaat ttctgtcgcg tggcgccggt aaatgcgccg ggctcatatc caaacaactc
     4981 gctttccagc agctcatgag gaatggccgc gcagttgact ttcacgaatg gcttttcatt
     5041 ccgcgaagac tcggcataga ccatgcgcgc cacaacttct tttcccgtgc cgctctcgcc
     5101 gcggatgagt accgtagccg tcgtgtcggc cacttgctcg attgtggttt tgacttccat
     5161 catcttcggg ctggtcccga agagcatggt gaaatcggtc tggcggcgta cctgctcgcg
     5221 aagctgcgtg acctcgccga agagccgttg actatccagc actttcgaga ttcttacgtc
     5281 gagctctttg ggatcgaccg gtttgcccac gaagtcgtct gcgccgagct tggaagcctt
     5341 gaaaatgatt tccggatcgc ggctggcgga gagcacgatg atggagagcg cgggcttgat
     5401 ctgcttcagg cgctgcaggg tatcgctgcc ggaatcgtcc cgtgacgctg tgtcgagcaa
     5461 gaccaggaag ggatcgaaat tgcggaagat gcggagcgct tcggcgctgc tggaggcgac
     5521 tgccacttcg aagttgcgtc gggtaaggtg ggtggccagg tatttagcca tgaccacgtc
     5581 ctcatccacg atcagcactc ggtttttggg gttcatgacg ctcctggcag caaatttggc
     5641 gggagaggca gagccggttg gggattccaa gccgcccact gttgcactca gattccattt
     5701 tcaggtattt ggatgctcaa aggaagcgaa aactgtggct ttacacgcaa tcaaagtagc
     5761 cgaatagact aagactgccg gtcaggtggg atttggctgg gaggacaatg ggggcgcagg
     5821 agcgcccccc aactggggtt aggaggagcg ctttccagtg atgaagtggt acggcggcca
     5881 gggaccgctc atgactactt ccacgcccgg tagatgccgg gtcgccattt ggtacttgtt
     5941 ctggtatttc tccacttttt tgtgatcaat aaggtgggcg atatcaatca acatgccgcc
     6001 ggaatcgact ttgcggcagc acacatcctg atcgagggga tcgaaaatct tgtggacctg
     6061 aacggaaaga gcgcgcgcct tggtctggcg ctcgcgctgg cggacggctt tttcgcggag
     6121 cttgctaagg tactcactgc ccacggtcgc cggcagctca atctcttcca aagcctcccg
     6181 aagcgagccg tctttgacca gcagcttcag gtgcatctcc gctttgccct taagcttcac
     6241 tacgccttcc aggaaagcct tgcggttcaa ccgaacggcg cgacgcaacg cctcgtcagt
     6301 atcgaagact gtaccgaagc ggaagggaag cacagtagtg cgcttgaagc attcgcttac
     6361 cacgtgggcg tgctgcaaaa gcgcggtctg tcccaggtcg ccggtgggaa tgtattcgct
     6421 cacgattacc gcgaattctc cactgttata ggcaaaggtc tgcgcatctg cgataccttt
     6481 tagattttct acgggaactg ggcggcggga ccgaatacca ttttgaaagg cttgttgctc
     6541 aacgatgcag tacgcgtacc atgccattgg gattgcttct cctgtccgga aaaacgctcg
     6601 gccggtgttg ggtttttgat tcgggcgaat tacttcgaag agcttcagac ttgggacttg
     6661 gcgggttttc caagcgcctc aaccatccta tgatgatgtt cacagaaatg caacacagtc
     6721 tgtgcacgag attcaaaaaa acttgatgtt aaacgaggct cagctttttc acttcagaat
     6781 cacagcgcaa atgtgatcct actcgccgca aactcgctct taatgcacgt gttagggcgc
     6841 acgtcctaaa ccataaaaag catcttggga aggcgtcggc aaacgcaggt acattgtcca
     6901 taagtacagt gaccctactc ttgagcacag ctgacactct gccgatgacg atgcacttct
     6961 ctggtaatac tcccgcgaga gctgccaata gcatctcaca gtgggcagtt gctgaagttg
     7021 cattctcacg cccatggtgc cgccagagtc cacaaaacca gctccttacg ctccagagaa
     7081 gtttgtggtg gaggtcttct cggagctgga ccaggagaca atccagaaac gttggcaaca
     7141 ccttaacgtg gtgctccggc tgagcatgct caccgggctg caaatgcaac ttgaagccac
     7201 gctgaatctt ctgtgcgact tcaccgcgga gatcgctccc tttgacaaag ctctcattta
     7261 tttttgggat gagggagacg accagatgcg gctgcgtttg gcgagaggcc tggggcacac
     7321 tccgggcgca tcagaagccg cgagcggcac caatgtgctg aacttatggg cggtacagta
     7381 tgggcgtccg ctcttgattt cccccggcga tcatctgcag gcagattcct tgttgaaagc
     7441 cttcggagcc gcaactgcgc tttgcatccc tctatttgtc aacaatcgcg tgataggttc
     7501 gctgcaacta ttctccaaca gaagcaacgc cttttctcag gaggacgcgc agctcctctg
     7561 gattgttgca ctggtctcag aaaatctgct cacccgggat tacgccaatg aagggctgct
     7621 ccggttcgcc ttcacagact atctgaccgg gctccgctcg cgcgggtact ttgagcagca
     7681 gcttgacctc gagtttaagc gcgctgagcg ccgccggcag aagttttcgc tgttgatgat
     7741 cgacattgac tttttcaagc ggctgaatga cacgttcgga catcacgtgg gcgaccagat
     7801 gctccgggat gtctcctcca tcctggtgaa agacatgcgc gaggtggaca cggtggcgcg
     7861 ctacggcggc gaggagtttg tgatcatcct gccggaaacc accgaaagtg gtgcaatcta
     7921 cgttgcggag cgcctgcgcc gggcggtgga gcaggccaaa ttttttgcct ccacacccag
     7981 ctctgttcag catcttacaa tcagcattgg attggctgtc tacgacacag acgcgcaatt
     8041 caagcgtgac ctgatcgaat ttgccgacgc ggcactgtat gccgctaaac acgaaggacg
     8101 caaccgcgta gtcgcctatt ccgcgctggc gcgacgcgca aaaagagaag tttcttaaga
     8161 cgagccatgc cgaactatca ctccggcgca gcaggatcca gcactgcgct ctcagaagga
     8221 gcttccagcc gtgagcccgg caaaaaaagc tggcgggtga ttcacgcctg tgagtacgcc
     8281 cgggacgtgc tgccggtgat tgaaacgcag atcaccgccg gaatgcggcc ctatatcgta
     8341 acgccgcagg gtgcgggcgc agcggaggtg tacctctccg gccgccagca ggagactttg
     8401 cggccccttt cattgctccg ctcctggcag gacgtccgca actggcgcaa gtcaatcctg
     8461 gactgcaatc cggaatacgc cgcggacctg gtgcatgcac actccttcgc agccggcatg
     8521 gccgcggtgc gaaattgcag ttgcgttgtt tatgacgttc aggcgtttat cgaggaactc
     8581 gcgattgcaa ccgggcagtg tgaagcaggg agctggatgg cccgttcatt tcgcgttgca
     8641 gagcagttta ttctggctcg cgcaggagct gttgtggtcc acagcggtag catggctgaa
     8701 gcagcgcacg aacggggcgc gccaagcgag agcattttcg ttattcccga tccgctgccc
     8761 ctgcaggaag gaagcatttc tccattccca caatcaccag ccgcggctga tggcgatgct
     8821 gcatctgcaa tcgctttttt cgttccggct ctgcacctga ccagcgatgg caagcctgat
     8881 tcggagagcc tgtcaattct gaaagccttc aatgcagccg ctgatcagct tgattcggca
     8941 agtctgaccc ttgtggtcgc gaatgatgct caaccagcat tcattagcga agtcccacag
     9001 cttactcagc aagggcgtgt tcgctttgtg gagtcgatgg cgcgcggatg ggaagtggcg
     9061 gacattgtgg tggtgccacc cagtggcctg agcctggttg agttccgggg agcgaacagc
     9121 ctttgcctgg aagccatgat acgaggcaaa gctgtgattg cagcggatac tccccacaat
     9181 cgcgacgtta gccctgaggg ccgcggctgc ctctggtata cggccgggaa tgccactgat
     9241 cttgccgcac gcatggcatt catggcggaa aatccggcat tccgatgcgc tctggcgcaa
     9301 tcagcattgg cctttatgca ggagtcgcga ggccctgcgg aactgggacg ccagtatgaa
     9361 gatgcctatc gccatgccgc cagccgtaga cgaaccagcg gaccgggcat gaacgcggca
     9421 ccgaacctct tcccagctac ccaggcagga tgatcagcta gcggtaacgt gctcggttcc
     9481 tgaattcctt caccagcagt tccagaaagt tttcattgtc cgccggacgc tggtcaggcg
     9541 caatattcag tttcgcggcc agcatgtgcg cgatacgcgc agcattttgc tgccggatcg
     9601 caggcgggat atccagcctt ctggccagaa atgcttcaat cagctcggct tcttccaccg
     9661 ttaattgggc agccgcggga aacacttgtt ctgtaacggc cggagtgttg aagaaaatcg
     9721 ccgattcgcg gtcagaggtt tcatgcacca cgattgtgcc ggctacaaag tcacccagcc
     9781 ggcgatgctt tgcgttgagc atcatggtga ctacgccaac gccgtagaag cttggcaggg
     9841 cgtctacgat gcgcaccagg tt
//
LOCUS       DASQYP010000253         3181 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_51829, whole genome shotgun sequence.
ACCESSION   DASQYP010000253 DASQYP010000000
VERSION     DASQYP010000253.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 3181)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3181)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3181
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_51829"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(170..682)
                     /locus_tag="VE783_08205"
     CDS             complement(170..682)
                     /locus_tag="VE783_08205"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53421.1"
                     /translation="MNVPESLSRELKSLADALKRLDKRLQAEAPPDAVLLSEFRQSLD
                     NVRLTAWSVSEVINARRNGEQPDHVLAFLSAERLRRLDQMVRNLCGDLERRVITERTY
                     GMNSLFDSVNVLQQRMARSLAERQSELTDKQRALKPPLPGACTNREGPGRAQVIPLMC
                     PGLPAHLAKK"
     gene            1070..1351
                     /locus_tag="VE783_08210"
     CDS             1070..1351
                     /locus_tag="VE783_08210"
                     /inference="COORDINATES: protein motif:HMM:NF013188.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015297 - antiporter activity [Evidence
                     IEA];
                     GO_process: GO:0006812 - monoatomic cation transport
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation:proton antiporter"
                     /protein_id="HYX53422.1"
                     /translation="MFLLLLFVVVFATLARKLRTPYPIILVLAGLVLSFIPGIPRMRL
                     NPDTIFVVVLPPLLYSAAWLTSWRDFYYNTHHHVIPTAVKQRAHSSACE"
     gene            complement(1745..2353)
                     /locus_tag="VE783_08215"
     CDS             complement(1745..2353)
                     /locus_tag="VE783_08215"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53423.1"
                     /translation="MSASAGPVQGRRFRWAGYFVLVIAALSSLDWLATIRRDYVMEHH
                     WPAATGTVYSMTEQSREVDPPSLRQRQRTTYYWAQFDVLLQLSPEQCPGGLLARNAQQ
                     PECQIIVRSPASTSPAAVVRWFRRHPVNSTVAIHYNPASGRTWMGGESPLDIYPMGKI
                     AVTCVMLTLAAILLLIARRLSFADATDASATDEDSSLVSIRL"
     gene            complement(2447..>3181)
                     /locus_tag="VE783_08220"
     CDS             complement(2447..>3181)
                     /locus_tag="VE783_08220"
                     /inference="COORDINATES: protein motif:HMM:NF018400.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1186 domain-containing protein"
                     /protein_id="HYX53424.1"
                     /translation="AMFLLAYFRERRAYPVLVALFSHPGEAILELTGDAVLNNGSQML
                     ASVCGGTGGLFSGVEGNSGNPKRGNPGGADLSGAPGRGDPSLSQANPTPPDLSGIKAL
                     IEGEQVNEFIRALSMEALIFLVKGGRLTRDDVVPYLLELFRKLERRPGHHWDELALAA
                     VALWPQETLEELKRAFADGLIADDIMEWREIEEALAEGPARATRPWRRRPFITDLEQD
                     MGWMQAFQTDSPRRARRSEHQRGRAN"
BASE COUNT          610 a          954 c          965 g          652 t
ORIGIN      
        1 gccagcaagc ggacgtgaat cacgacgggc ttacagacct ggtgtgcgac ttccgcgcat
       61 cgcaactcaa cgtgcctctc ggagattcca ttgtcgtcct ggaaggatct acgctgaatg
      121 gtgttcctat tcgcgggcag gccgggatca aggccgcagc gtaatttgat tactttttgg
      181 caagatgcgc ggggagcccg gggcacataa gcgggataac ttgtgcgcgt ccgggcccct
      241 cgcgatttgt gcaggcccct ggcagcggcg gttttagcgc gcgctgctta tccgtcagtt
      301 cactctggcg ctcagcaaga ctgcgggcca tcctttgctg cagcacattc acagagtcga
      361 acagcgagtt catgccatac gttctttcgg taatcacccg ccgttcaagg tctccgcaca
      421 aattccttac catctggtcc aacctgcgca aacgctcggc tgaaaggaag gcgagcacat
      481 ggtcaggctg ctcaccgttg cggcgcgcat tgatgacttc gcttacgctc caggccgtga
      541 ggcggacatt atccagcgac tggcggaact cgctcagcag caccgcgtca ggcggagctt
      601 ccgcctggag ccgcttgtca agccgtttca gggcatccgc caggcttttg agttctcgag
      661 agagactttc aggaacgttc atcttgcaca catctccact tcttttctta gcgtggccgc
      721 cgctttgccg ctgcgcgatt cccgtgcgcc agccggcgag aagtgaaggg tgcctcggca
      781 acttacactt ccccgggcat attcgcctgt ttcgcccgcg ataccagatg catcgttgcc
      841 cgataatata tctgaaatct ttaagataag ggcgttctga attcgcctta gcaggtgacc
      901 ttggtaacct gcagcggagt tactgcgttc gtccagtact tcgacgttga aaatatcgca
      961 tcgcatcgca cccccaagag cgacatgaca gcgggccaac ggttagaatc tcctgcacat
     1021 ttcaggaggg agagcggtgc acagcggcat acacgcgaca gaaatgatca tgtttctgct
     1081 tctgctgttt gtcgttgtct tcgccactct ggcgcgcaag ctccgcacgc cgtatccaat
     1141 cattctggtg cttgccgggc tggtgctgag tttcattccg ggcattcccc gcatgcggct
     1201 caaccctgac acgattttcg tggtggtgct gccgccactg ctctactccg ccgcatggct
     1261 cacctcatgg cgggacttct attacaacac ccaccaccac gtcatcccga cagccgttaa
     1321 gcagcgcgcg cactcttcag cgtgtgagta ggctggagag accttgcggt taaactacgc
     1381 agccgcgacg aatgggggcg ttctcaaacg aagatgataa ggattgtttt cgcgccgcct
     1441 gagctggatt tcttcacgcg cgctccggct gtgcctgcgc ggcgggcctt cgggcgaaaa
     1501 ggaagggatt cgttttcggc ttacccagcg cttatccctc atcccgctca gcgggactcg
     1561 ggaacgcact gggctaactc ctgtcgcgcc taacggcgct gcattctgga cattcccgct
     1621 catccacatg cctcctggtg cgcttcgatt cagctttaga aaacggccct tccgcaaggg
     1681 acaaaggtgc ggttgaggat caaggattag cggtgagatc ttgtgggttg gttttgggaa
     1741 aaggctaaag cctgatcgaa accagggagc tgtcttcgtc tgtggcggag gcatcagtcg
     1801 catcagcgaa ggaaagtctg cgggcaatga gaagcaagat tgccgcgagt gtgagcatca
     1861 cgcaagtcac tgcgatcttc cccatggggt agatatccag cggcgactca ccgcccatcc
     1921 aggtccttcc gcttgccggg ttgtagtgga tggcaacggt ggaatttacc ggatgccggc
     1981 gaaaccagcg caccacagcc gccggcgacg tggatgcagg cgagcggaca atgatctgac
     2041 attccggttg ctgagcgttt ctcgccagca agccgcccgg gcattgttcc ggcgagagct
     2101 ggagcaggac atcgaattgc gcccaatagt aagttgtacg ttgccgctgc cggagactgg
     2161 gcgggtccac ctcgcgtgac tgttccgtca tggagtagac ggtcccggtt gcagccggcc
     2221 agtggtgctc catcacatag tcccggcgga tagtcgccag ccagtcgagc gaagagagcg
     2281 cggcaatcac gagcacgaaa tatcccgccc agcgaaagcg cctgccctga accgggcccg
     2341 cggaagctga catgatggca gaattatggc ggagagggaa tgcagggcca agagaacgat
     2401 ggtgggtgtt ctatagttgc ggtggccgca gacgccggac cgggaatcaa ttcgcccgcc
     2461 cccgctgatg ctcagacctt ctggcccgcc gaggcgagtc ggtctggaat gcctgcatcc
     2521 agcccatgtc ctgttccagg tcggtgatga agggccggcg acgccatggc cgggtggcgc
     2581 gcgcagggcc ttccgccagc gcctcttcaa tctcgcgcca ttccataatg tcatcggcga
     2641 tgagcccgtc ggcgaaggcg cgcttgagtt cctcaagcgt ttcctgcggc cagagggcca
     2701 ccgcggccag ggccagctcg tcccagtgat ggccggggcg gcgctccagt tttcggaaca
     2761 gttcgagcag gtagggcaca acgtcgtcac gggtgaggcg gccgcctttt acgaggaata
     2821 tcagagcctc catggaaagc gcgcggataa actcgttcac ctgctcgcct tcaatcaggg
     2881 ccttgatgcc gctgagatcg ggaggggtgg ggttggcttg gctgaggctg ggatcgcccc
     2941 tgccgggagc tccgctcagg tccgccccgc cgggattgcc gcgtttggga ttgccgctgt
     3001 ttccctccac accactgaaa aggccgccgg tgccgccgca caccgaggca agcatctgcg
     3061 agccgttgtt gagcaccgcg tcgccggtga gctccaggat tgcctcgccg ggatgcgaga
     3121 agagcgccac cagcacggga taggcgcgcc gctcacgaaa atacgccagc agaaacatgg
     3181 c
//
LOCUS       DASQYP010000254         8303 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_32473, whole genome shotgun sequence.
ACCESSION   DASQYP010000254 DASQYP010000000
VERSION     DASQYP010000254.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 8303)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8303)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8303
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_32473"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..3075)
                     /locus_tag="VE783_08225"
     CDS             complement(<1..3075)
                     /locus_tag="VE783_08225"
                     /inference="COORDINATES: protein motif:HMM:NF013508.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fibronectin type III domain-containing protein"
                     /protein_id="HYX53425.1"
                     /translation="MLDLASNTEAKFTASLKPWINIMVDLAARFWIGAALVGGFTAPT
                     AMAQVHTPFATGVTEPMGGLVLSGSAVNPQTGRAYRHLWNSDQGGFGLCRLDPDVDTP
                     GPHTVNINTCLPFVAGVAFKPGQLAFDPGLNNIYAVDVQSNTQGVYRLHYVPTADGGH
                     GALDMIHQEVLGGNGLTGRNGTPGCVVPGNTPNSAALGPDGNLYIGFKRSGNIVRLNS
                     PQTDPFPCSNVQIIGTTPDQTKNFGLAWIGHDLYGGDGISLWVIANGDQCLTPQNGQF
                     TCRGHNIFQSQTALPTFVMSDQIYPDTGGTNIYVATPSSITLVNMVTTLVTPNYATGF
                     EFLSGLAIDSTDSSIFAADDPTAGKLPSQGRWFDLGNGPSNGGRPVGTLTEFASGVTE
                     PIGGVVLTGTAVNPATGQPYRHFWTSDLGGFGLCRLDPDMDTPGVHTMNVNTCMAFVA
                     GVQFKPGELAFDPILNNLYAVDLQANTQGIFRLHYLPSGDGGHGAFDPLHAEVLGGSA
                     TTVHQQLPGCGIPGNVPNSAVLGPDGNLYVGFKASGDIIRIVSPQTEPLPCSNIQTIG
                     TTPDGRKDFGLGFIGHDLFGGDGLSAWIMVAADMCVKPATGNQRCQSNSILVPQTASP
                     TYVMTDQLYPSMNGRNLFVGKPGSITLVDTTTLKVAMDYATGFQFLTGMALDPTNLSL
                     FAADDATGGKVTGQGHWWLVGGQQQSGPAAPGTPANVIATAGDGQVSLAWTPAADGQA
                     VTSFIVENSFASNGSTVPPSFITPPAGSVVVPASTVITGLTNGVSYEFVVAAANSIGT
                     SAFSTPSNAVMPQAITVPDPPTNVLAQAANASASITWSAPVNNGGSPITGYTVSALIG
                     GSPSGISTATPATATGAALNGLTNGTSYTFIVQASNAIGIGAASVPSNPVTPQPPAPP
                     AVADVLVAISGPNSLPPQSTAGYEITVTNKGNTAIAQLVVVDSYTSGAASAISAIPSQ
                     GSCTTGASINCMAGALSPGGTVAVGITHTLVAKVLHTATVQALDAKGNAMAIA"
     gene            complement(4691..7468)
                     /locus_tag="VE783_08230"
     CDS             complement(4691..7468)
                     /locus_tag="VE783_08230"
                     /inference="COORDINATES: protein motif:HMM:NF013508.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fibronectin type III domain-containing protein"
                     /protein_id="HYX53426.1"
                     /translation="MKTPIEKNFLQHGVRQATGRVAAILGCLLILAFASVTASAQTFQ
                     SANTVTTLWAGVADVTTTGPGGLTTPTSGVIVHGTAISQFTNGPKDPVTGLFACQLPG
                     ATAPCNTVRHLWYGDAINGLCRIDPEVDAPLSTPVNGFGAWNVNALACLISVQKLAIA
                     PGQVTFDAQNNIMYIANNSRVGAGIARVFYHPDGDNGQGMVDLIRVDSLIGTQTNRNA
                     FGGCPQLKDPKTGVLVPQIPDAAAIGPDGNLYTGQIRSGSIIRIINPSTFNTQTDCVP
                     AGDTGQSPTGKIQIPILAHDELFGTGHTFGLGWIGDTLIGADNIAPWVKFHATQCLTP
                     VNGNTTCGNPLVGGAPLGDEILASAAGAPQGGLASDAQYPFFPGNSVYVASFPNLTRV
                     TNILSASQMTANLNYGGSFSFLTGVTADPEDPANAIVYAGDDETQGGINGTGRLWKIT
                     PTPAAPGPPATPSITGATAGPGTGQATINWVPTVNGQPITSYTVRTLLASPTGGPPTP
                     SPIADTTVNAPATSATISGLIAGTGYQFEIEACNVNGCSAFTGPSPIVTPFTQAAPGA
                     PTNVVAVDSGSGSQAAVAWTQADNGHSTITSSAVNAFLTGNPTAVSTTTLLGAGTGTT
                     VNGLTCGNSYQFSVTATNAIGTSAPSSLSAPISIACVTAADVSATETSPATANPGAQV
                     TYTITVRNAGPAAAPVVQFADTLPAPLVSFTTTQGVCAGTAGLTTFNCNLGTMGLNAT
                     ATVTVTVLLPNAAGTFTNSATVTATNGSSVNVDPNTANNTFTSTTTVAGSSCGTGNAD
                     VQVTGASNNGNPVHGSPVTFTWQIKNGTGNVTASCVSFTATTTAPSGASLTQNSVSST
                     AGTCSISGNTVSCSLGDIAGGGTATVTVQATPSNAEPANSYTTTGKAALGGGTDPNTA
                     NNQSTVSIGAQ"
     gene            complement(8106..>8303)
                     /locus_tag="VE783_08235"
     CDS             complement(8106..>8303)
                     /locus_tag="VE783_08235"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53427.1"
                     /translation="LESRRTIPLQEATPEISEKLFQRNMAKLMKPLDSVQARYNERYF
                     AAVAAAGSAPALATTKTRSLN"
BASE COUNT         1732 a         2260 c         2547 g         1764 t
ORIGIN      
        1 ggcgattgcc attgcgttgc cctttgcatc cagcgcctgg actgtcgcag tgtgcaggac
       61 ttttgccacc agagtatgcg tgataccaac ggcaaccgtg ccgccgggac tcaacgcacc
      121 cgccatacaa ttgatggaag ctcccgtggt gcatgagccc tggctgggaa tagcggagat
      181 ggcggatgcg gcgcctgagg tataagagtc caccaccacg agctgtgcga tggcggtatt
      241 ccctttattg gtcacggtta tttcatatcc agcggtggac tggggcggga gtgagttcgg
      301 gccgctgatg gccaccagta cgtcagcgac cgcaggcggg gcgggcggct gcggcgttac
      361 cggattggaa ggtacggatg ccgctccgat gccgatggca ttgctggcct gaacaatgaa
      421 tgtatagctg gtcccattcg tcaatccatt cagggcagca ccggtcgcag tggcaggggt
      481 tgcggtactg attccggaag gagacccgcc aatcagggct gaaactgtat agccggtgat
      541 gggactgccg ccgttattta ccggggcgct ccacgtaatg cttgccgaag cgttggcggc
      601 ctgcgccaga acgttggttg gaggatccgg aactgtgatg gcctgcggca tcacggcatt
      661 gctgggcgta gaaaacgcgc tcgtgccgat agaatttgcg gccgccacca cgaattcgta
      721 ggagactcca ttcgttagtc cggtaattac agtggaagcg ggcactacaa cgctgccggc
      781 tggcggagta atgaatgaag gcgggaccgt ggagccgttc gacgcgaaag aattttcgac
      841 aatgaagctg gtaaccgcct ggccgtccgc tgcaggagtc catgcaaggg aaacctgccc
      901 atcgcccgcg gttgcaatca cgttcgccgg cgtccccggc gctgcaggcc cggattgctg
      961 ctggccaccc acaagccacc agtgcccctg gccagtgacc ttcccgccgg tggcatcgtc
     1021 cgcagcgaag agcgaaagat ttgtgggatc aagcgccatg ccggtcagga actgaaaacc
     1081 agtggcatag tccatcgcaa ccttcagcgt cgttgtgtcc acaagagtaa tgctgccggg
     1141 cttgccgacg aaaaggttcc gtccattcat tgagggatag agctggtccg tcatcacgta
     1201 agtgggagag gcggtctgag gcaccaaaat gctattgctt tggcagcgct gattgccggt
     1261 ggccggcttc acgcacatgt ccgcagccac catgatccag gctgaaaggc cgtcgccgcc
     1321 gaagagatcg tggccaatga acccgagacc aaaatctttc ctaccgtccg gcgtagtgcc
     1381 gatggtttga atattgctgc acggcaatgg ctcggtttgc ggcgagacga tccggatgat
     1441 atctccgctg gccttgaagc ccacgtacaa gttgccgtca ggtccgagca cggccgaatt
     1501 aggaacattg ccgggaatcc cgcatccggg cagttgctgg tgaactgttg tagcgcttcc
     1561 gcccaggact tccgcgtgta aagggtcgaa agctccatgg cctccgtctc cggaaggcag
     1621 atagtgcagg cggaagatgc cctgcgtatt tgcctgaaga tcaaccgcat agagattgtt
     1681 caggatggga tcaaaggcga gttcgccggg cttgaactgc acaccggcaa caaatgccat
     1741 gcaggtgttc acgttcatgg tatggacgcc cggcgtgtcc atatcaggat caagccggca
     1801 caagccgaag ccgccaagat cgctggtcca gaaatggcgg tagggttgac ctgtagccgg
     1861 attgaccgcg gttcctgtga gaacgacgcc gccgattggt tctgtgacgc cggaagcaaa
     1921 ttctgtgagc gttccaactg ggcggccgcc attgcttggt ccgttgccca gatcaaacca
     1981 gcgtccttga gaaggcagct tgccggcagt gggatcgtcg gcagcgaaga tggaagaatc
     2041 cgtcgaatca atcgcgagcc cgctcagaaa ctcaaagccc gtagcgtagt tcggagtaac
     2101 cagcgtggtg accatgttca ccagcgtgat actggaaggc gttgcaacat agatgtttgt
     2161 gccgccggta tcgggataaa tctggtcgct catcacgaat gtgggcaggg cagtctggga
     2221 ctggaagata ttgtggccgc ggcaggtgaa ctggccattc tgcggggtaa ggcactgatc
     2281 gccattcgca atcacccaaa gcgagattcc gtctccgcca tagagatcgt ggccgatcca
     2341 ggcaaggccg aagttcttcg tctggtcagg cgtggtgccg ataatctgca cgttcgagca
     2401 gggaaacggg tcagtttgcg gagaattgag tcgtacgatg tttccgctac gcttgaagcc
     2461 gatatatagg ttgccgtccg gaccaagcgc agcagagttt ggagtgttgc ctggaaccac
     2521 acagcccgga gtgccgttgc gtcccgtgag accattgccc cccaggactt cctggtggat
     2581 catatccagc gcgccatgac caccatcggc ggtaggaaca tagtgaagtc tatatacgcc
     2641 ctgagtgttt gactgaacgt cgacggcgta aatgttgttc aagcctggat cgaacgccag
     2701 ctggccgggc ttgaacgcga cgcctgccac aaatggcagg caggtattga tgttgacggt
     2761 gtgcggtccc ggagtgtcca catctggatc caggcggcat agaccaaaac ctccctgatc
     2821 gctgttccac aaatggcgat aagctctgcc ggtctgtgga ttcaccgcgc tgccgctgag
     2881 aacaagtccg cccatgggct ccgtgactcc ggtggcaaag ggcgtgtgga cctgggccat
     2941 ggctgtggga gcggtgaacc cgcccaccag ggccgcgcca atccaaaatc ttgccgccag
     3001 atccaccatg atgttgatcc agggcttcaa tgacgcggtg aactttgcct cagtgttgct
     3061 tgcgagatcc agcattgttt aattcccctt ccggctcaaa tcagcccagt cctcaaagaa
     3121 gcgctcagat tcaaaaactg cgagtgcacc gcacatctcc tgatcagcgg agcacacctc
     3181 acctctcgcc tggcgagagg cacttaaccg acaaaaattg ttttcgctag ctgatgtctg
     3241 gcgggaactg gactcttgtt gtctgtccag cgcgttgaag acccggggga aacatcggag
     3301 ccgagttggc gttaattgtt gttcagcgac ttactaaaat tgcttccagc tatgaatggt
     3361 tactgcccgc gcgggctgca aaaagatgaa gttggatgat tgcaaccgcg aactgtatta
     3421 accatccaac ttccaaagtg ttgcagctta catcgaatgg ggccctacaa catcctggcc
     3481 gcgctccagg aatcctataa atgcgtgtgt ctgtgcgcac tggcacgagc acgaatgaga
     3541 atgaatgcat aattgagttt tggaaccgat aagggtgggc aactcaccag gaagagaggg
     3601 tagacctggc aagctgccca tctctgagca gattgattta aagagcgtaa ccttttgccg
     3661 taatcctcct ttcgacaaga gcatggaact gcgaaactca aagtccgtga ggcgcagcgt
     3721 ggaaggagga taggtattgc gggccagtgc ggaagcgtct tccgttgtca tgtttgcggt
     3781 atggccggta cgcgatagca tctcaactcc tcggcatccg gagccggatc gttgatcagc
     3841 aacaacgtcc gctccggcgc tcgttcggcg ccaaatcttc aatcctgtaa gtgggagcgc
     3901 acagccgctg cggcaggtct gactttctca accaatggcg ggggaccaga ggaataagct
     3961 tagggctgtc tattcgtgcg ttatcacgct agagccgggt gttgcacagc ttaaccaacg
     4021 gaaccccact cgccttttca cggcaaatgt gcgacggtcc acccaggagc aactgaaaaa
     4081 tatcttcagt catgatgttt ggcgggtaac cggtctgtgt aatctgacca gcgcgtgaga
     4141 tgcccgaaag aacatcaaaa tcgtcgatgg gatgagaatc tgcttcccac attagacgga
     4201 aattaagcga tgattaaact tcttaacgat ttaagacttc cgctaggtgt tgcttccggg
     4261 gctgtgcttt tggagggggg ctcggaaatg tttgcggaga agtgaagcgg ccaaaaacag
     4321 agaaggttgg gcaaaccaag cggggaggtt tacccaacca tcatgttcct gcaatcagca
     4381 gggccagctc gcaaaaaacc tgcccgtcgc gcagggagaa gaccacattt gctgctgcag
     4441 gaattgtgag aaaccgcacc tacaatgagt tcgaataatc gcttataagt ccagatcttt
     4501 ttgggcttcc gtttcttctg ctcacgatcc cattcagtct gcatttccgg ttcgcccaga
     4561 agcgaccaga aacgccattt aaactgccgc ctgaaccctt atcgagcagc acccagacgg
     4621 cagctatgac tctaatgctg atcttccact gccgggcagg ttcgcccggc agcagaaggt
     4681 tagaggttaa tcactgggcc ccgatagaca cagtggactg gttatttgcc gtgtttggat
     4741 cggtgccgcc gccaagtgcg gctttgccgg tcgtcgtgta ggagttggcc ggctccgcgt
     4801 tggacggagt ggcctgcacg gtaacagttg cggtcccacc accggcgatg tcgcccagac
     4861 tgcagctcac cgtattgccg gagatgctgc aagtcccagc tgtgctggat accgagtttt
     4921 gtgtcaagga agccccagac ggagcagtcg tcgtggccgt gaaggacacg caactggccg
     4981 tgacgttgcc ggtgccgttc ttgatctgcc aggtgaaggt caccggagat ccgtgaacgg
     5041 ggttgccgtt gttggaagcg ccggtcacct gaacatcggc gttgccggtg ccgcaggacg
     5101 agcctgctac ggttgtggtg gaagtaaacg tattgttggc cgtgttcgga tccacgttaa
     5161 ctgagctgcc gttggtcgca gttacggtcg cgctgtttgt aaaagtacca gcagcgttcg
     5221 gtaacaacac agtcacagtc actgtcgccg tggcgttaag tcccatggtg cccaggttac
     5281 agttaaacgt tgtcagccca gccgtgcccg cgcagacgcc ctgcgtggtg gtgaaggaga
     5341 ccagtggcgc cggcagcgtg tcagcaaact gcaccactgg tgcggccgca ggtcccgcgt
     5401 tccggacggt gatggtgtag gtcacctgcg caccgggatt ggcggtggcc ggcgaggttt
     5461 ccgtggccga tacgtcagcc gcggtgacgc aagcgatcga gatcggcgct gacagcgacg
     5521 agggcgcgct ggtgccaatc gcgttcgtag cagttaccga gaactggtag ctgtttccgc
     5581 aggtcaaacc attcacggtt gtgccggtac ctgcgccgag cagcgtggtg gttgataccg
     5641 ccgtcgggtt gcccgtaagg aacgcgttga ctgcggaact ggtgattgta gagtggccgt
     5701 tatctgcctg ggtccaggcg acggcggctt gcgaaccgct gcccgaatcc actgccacta
     5761 cgttagtcgg agcacccgga gccgcctgcg tgaacggagt cacgatgggg ctggggccag
     5821 tgaacgcgct gcaaccgttg acattgcagg cctcaatctc aaactggtac cccgttccag
     5881 caatcagacc gctgatggtc gccgaagttg ccggcgcatt gacggtggta tcggcaatag
     5941 ggctcggggt cggcggtccg cccgttgggg aggccagcag agtcctcacc gtataggagg
     6001 tgatgggctg cccgttgacg gtcggcaccc agttgattgt tgcctggcca gtgcccgggc
     6061 cggcggtcgc cccagtgatg ctgggcgtcg ctggcggtcc aggagcggcc ggagttggcg
     6121 tgattttcca gagccggcca gtgccgttga tgccgccctg cgtctcgtcg tcccctgcat
     6181 acacaatcgc gttagcagga tcctcgggat cggctgtaac tccggtcagg aatgagaacg
     6241 atccgccata gttcaggttt gcggtcatct ggcttgcact gaggatgttc gttaccctgg
     6301 tcaggttcgg gaatgaggca acgtacaccg agttgccggg gaaaaacggg tattgcgcat
     6361 cgctggccag tccgccttgc ggggcgcccg ccgcgcttgc caggatttca tctcccagcg
     6421 gggctccgcc cacgagcgga ttgccgcagg tggtgttgcc gttcaccggc gtcaggcact
     6481 gagtggcatg gaacttcacc cagggtgcaa tgttgtccgc accaattagt gtgtcgccaa
     6541 tccagccaag accgaatgtg tggccggtgc caaacagttc gtcgtgggca aggatcggaa
     6601 tctggatctt cccagtagga ctctggccgg tgtcgcctgc gggaacgcag tcggtttggg
     6661 tattgaaagt ggatgggttg atgatgcgaa tgatcgagcc gctccggatt tggccggtat
     6721 agaggttccc atcgggtccg atcgcggcgg catcggggat ttgcggaacc aggacgccgg
     6781 tcttcgggtc cttcaactgc ggacagccgc cgaacgcatt tctgttcgtc tgggtaccga
     6841 tgaggctgtc cactcgaatc aggtcaacca ttccctggcc gttatcgccg tccgggtggt
     6901 agaacacgcg cgcgatgcca gcgcccacac ggctattgtt ggcgatgtac atgatattgt
     6961 tctgcgcgtc aaacgtgacc tggccgggag cgatcgccag tttttgcacg ctgatcaagc
     7021 aggccagcgc gttcacgttc catgcgccaa agccattcac gggcgtggag aggggagcat
     7081 caacttccgg gtcaattcgg caaaggccgt tgatggcatc gccataccac aggtggcgaa
     7141 ctgtgttgca gggcgctgtg gccccgggca gctgacaagc gaaaagcccg gtcaccgggt
     7201 ccttaggacc attggtgaac tggctgatcg ccgtgccgtg cacgattacg cccgaggtcg
     7261 gcgtggtgag gccgccggga cctgtggtag tcacatctgc gacaccggcc cacaacgtgg
     7321 taacggtgtt ggcggattgg aatgtttgcg cgctcgctgt aacactcgcg aacgcaagga
     7381 tcaataagca gccgaggatt gcggcgactc ttcctgtcgc ctggcgaact ccatgctgca
     7441 ggaaattttt ttctatcggg gttttcactg ctttatctct ttcccgttcc cggaagcttg
     7501 agcttcagaa acgattggtt gagttggctc ttacgagtgg ctgtctctgc agcggtccgt
     7561 taggactcga gcagcgatca atccgcatcg cccgcgatca cgcgcagcga tgcttccgtc
     7621 tgtaaccggg aaaggaaagt tcagtttggc ggactgaaac gattgggaaa cgggccataa
     7681 ctgcctaagc cttttcggtt gctgggcacc tcagaccgaa agtgggtgaa attaaacctt
     7741 cccctcggtc ctacagttac agctaccaac aagcggcaaa agcccgattt gtttcgtcga
     7801 ttgggcagcg aaaattttat tcagattccc cggactcgtc cgcaaagcct cgtcatggga
     7861 aaccgtgcaa tagtccattg ccctaaagaa cggggaaact cgccaattgc acacttggag
     7921 gatggaacgg ttgcattaac cggtcattag aatcagatta gatttcttaa tgtattaaga
     7981 catgacgctg gcgcgacggt ttgcgttcgt gaatcgatac gcagcggcgc ctgtaacgcg
     8041 ccgatcctgg gcagcacaag caggcacggc gaccgtctcg attcgccaaa agaaacaaga
     8101 acagtttagt tgagtgaacg cgtcttggtg gtcgcgagcg ccggggcaga gcctgcggcc
     8161 gcgacagctg cgaagtatcg ctcattgtag cgcgcctgga ctgagtctag cggtttcatg
     8221 agcttcgcca tattgcgttg gaacaacttc tcggaaatct ccggcgtggc ttcctgcagc
     8281 ggaatagtcc ttcggctttc caa
//
LOCUS       DASQYP010000255         2559 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_229211, whole genome shotgun sequence.
ACCESSION   DASQYP010000255 DASQYP010000000
VERSION     DASQYP010000255.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 2559)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2559)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2559
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_229211"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(229..669)
                     /gene="tnpA"
                     /locus_tag="VE783_08240"
     CDS             complement(229..669)
                     /gene="tnpA"
                     /locus_tag="VE783_08240"
                     /inference="COORDINATES: protein motif:HMM:NF033573.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS200/IS605 family transposase"
                     /protein_id="HYX53428.1"
                     /translation="MSHTYYSLLVHCIFSTKERRILIPADLRSRLWPYIAGSARQNKF
                     KALAVGGMQDHAHALLSLPTTLSIAKAVQLIKGGSSKWINDHLPRRTFAWQDGYGAFT
                     IGISQLTTTIRYIDNQERHHARMDFGDELLKMLHRHGLKLYGRE"
     gene            complement(1033..2298)
                     /locus_tag="VE783_08245"
     CDS             complement(1033..2298)
                     /locus_tag="VE783_08245"
                     /inference="COORDINATES: protein motif:HMM:NF017760.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HYX53429.1"
                     /translation="MAAHAPAPALSEADETTVIGVQRIARALRHRDFRLFWAGNFLSN
                     VGTWMQNVAQGWLVLQLTNSAFWLGVVGFASAIPILFFALIGGVIADHTNNRKLLMGT
                     QSAMMIFAFAMSGLTFFHHITVGWVAVLALGTGVAMSLNTPSYQALVPQLIPREDLTN
                     AIALNSAQFNMSRVIGPTLGGFAMALVGPSGNFFLNGLSFLAVLFALTQMQYPARTAP
                     PEGHFFEKLKQGFAYVFHNPHTGPLVILTAIASLLAVPYLTFVPYFARDVLHGDARGL
                     GILMACNGAGAFCGAATIAYAGKIRRRGHFIIRAGAGFFASIIAFTFSRNFLLSGLLL
                     MVVGYFMIIMVATINALLQHLADDTMRGRVMSIYSTAFLGLPPLGSLAAGLLARVISP
                     AHAIAGMCALALVSSVAAFQWKVALRELD"
BASE COUNT          580 a          637 c          852 g          490 t
ORIGIN      
        1 cacggagaca cggagacacg gagaaaggga agcctggcgg ggaattatcc cgagttagta
       61 atttggtaat cgggtaatgt gagcaggccc gcacgaatct gcgcaaatcc accgacgaag
      121 aagctcagtg aagcagtccc gcgcgagcgg gacggatcgt agtaacccgc cgtttcaacg
      181 gcgggaaggc tgcgcgagcc gattcagtcc ccgcagggga cggctgagtc actctcgtcc
      241 ataaagcttt agaccgtgac ggtgcagcat cttcagcaat tcgtcgccga aatccatacg
      301 cgcatgatgg cgttcctgat tgtcaatgta tctgatggtc gtcgttaact gcgatatgcc
      361 gatggtgaat gctccgtaac cgtcctgcca agcgaatgtt ctcctcggca gatgatcatt
      421 gatccatttt gaggagccac ccttgatgag ctgtacagcc tttgcgatgg acaacgtggt
      481 gggtagtgag agcagtgcgt gagcgtggtc ctgcatgcct ccgaccgcga gggctttgaa
      541 tttattttgt cgagcgctgc ccgcaatata gggccagagt ctggatctca ggtcggccgg
      601 gataaggata cgacgttctt tagtggaaaa gatgcagtgg acgaggaggc tgtaataggt
      661 gtgagacatg gccggaggat tttagacgca ttcccggcgt tgaaacggcg ggctactacg
      721 agtcgtcccg ctggcgcggg actggggcgt agttggattg gagggtgaac gttcctgaaa
      781 tggcgtttgg ctgagttctg ctcttttcag acgtcctcat ccgcagatgc gggttcctga
      841 tttaagaatc gggtgtaaaa cacctttgcg aatctgcgtg cgttagcggc ccgcctacat
      901 gaatgactag agcgcgggtt tcttcaggat gtggaagatc atagggttcc ctcaccgcaa
      961 aaggcgcggt tcgggatttc aaaaacactg cgcggttcgg gatgtagaac agagcacggg
     1021 tcgagtgaat aactaatcta gctctctcaa agcgaccttc cactgaaacg ccgccacact
     1081 gctgactaaa gccagggcgc acatgccggc gatggcgtga gccggggaga tcacgcgcgc
     1141 gagcagtccg gccgccaggc tgccaagggg cggcaggccg agaaatgcgg tggagtagat
     1201 gctcatgacg cgtccgcgca tggtgtcatc cgccaggtgc tggagcagcg cattgatcgt
     1261 agccaccatg atgatcatga agtagccgac gaccatcagg agcaggccgg agagcagaaa
     1321 attacgggag aaggtgaaag caatgattga tgcgaagaac cccgcgccgg cgcgaataat
     1381 gaaatggccg cggcggcgga tctttccggc gtaggctatg gtggcggccc cgcagaatgc
     1441 gcccgcaccg ttgcacgcca tgagaatgcc gaggccacgc gcgtcgccat ggaggacgtc
     1501 gcgggcgaag tagggcacga aggtgagata gggcacggcc agcaaactgg cgatcgcggt
     1561 gagaattacc agcggtccgg tgtgcgggtt gtgaaacacg taggcaaagc cttgtttcag
     1621 cttctcaaag aagtggcctt ccggcggagc ggtgcgggcc gggtactgca tctgcgtgag
     1681 cgcgaagagg acggcaagaa agctcaggcc gttgagaaag aaattcccgg aaggcccgac
     1741 cagcgccatg gcaaagccgc cgagcgtggg gccgatcaca cgcgacatat tgaactgtgc
     1801 tgaattgagg gcgatggcgt tggtgaggtc ttcgcgcggg atcagctgcg gcaccagggc
     1861 ctggtagctc ggcgtgttca gagacatggc gacgccggta ccgagggcca gaactgcaac
     1921 ccagcctacg gtgatgtgat gaaaaaaggt caggccgctc atcgcgaagg cgaaaatcat
     1981 catggccgat tgcgtcccca tgagcagctt acggttattg gtatggtccg cgatgacgcc
     2041 gccgatcagg gcgaagaaga ggatcgggat tgcggaagcg aagccaacca cgccgagcca
     2101 gaatgcggag ttggtgagct gaagcaccag ccagccctgg gcaacgttct gcatccaggt
     2161 gccgacgttg gagaggaagt tgccggccca gaagaggcgg aagtcgcgat ggcggagcgc
     2221 acgcgcgatg cgctgcacgc cgatgacggt ggtttcgtcg gcctcagaca gcgcaggcgc
     2281 tggggcatgc gccgccatca agagttgggc gttaggttgt gagtcagtgt tcaaagttga
     2341 ttgagagggg aagactcatc ataagacagg gcaatggcgg ttgccattgg ctgttagcct
     2401 gagaggagta attggcagat agtaattaga agccatctca aaaatgagtt aaccaaactg
     2461 atggctcggg gctgttgatt ggatcgcctg ggcgactgct ctcctgcgtg ctgaacgtag
     2521 cttttgtaac tgtgtagcac aggcgccctc gcctgtgcc
//
LOCUS       DASQYP010000256         6866 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_309060, whole genome shotgun sequence.
ACCESSION   DASQYP010000256 DASQYP010000000
VERSION     DASQYP010000256.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 6866)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6866)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6866
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_309060"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..567)
                     /locus_tag="VE783_08250"
     CDS             complement(<1..567)
                     /locus_tag="VE783_08250"
                     /inference="COORDINATES: protein motif:HMM:NF015995.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycine betaine ABC transporter
                     substrate-binding protein"
                     /protein_id="HYX53430.1"
                     /translation="MDRRTFVCGAALALLGCRAHASGITVGSKNFTEQLLLGELLAQY
                     LEGLKIAPVDRRFYLAGTYICQQALLAGRIDLYVEYTGTALAAVLKQRIPEDHSQVQE
                     IVRRMYAERFGLQVLPSLGFDNSFAIVMRGDDARRLGLTKLSQLGAASSQLRMGVGYE
                     FLEREDGYKGLVRTYGLNFREAPRVMDLG"
     gene            complement(569..1201)
                     /locus_tag="VE783_08255"
     CDS             complement(569..1201)
                     /locus_tag="VE783_08255"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HYX53431.1"
                     /translation="MLKFLFDRKHEIATLGAEHLWLVGVSVALAILIGVPAGIFLTRR
                     PAWKNAVLGATGVIQTIPSLALFGLLLPLPWLGARADRLAIVALTLYALLPIVQNTYV
                     GITGVDAPVREAATAMGLTNGQLLWKVELPLAANVIVAGIRVATVLTVGVATIAAAIG
                     AGGLGEFIFRGVSMVDNRVIMAGAIPAALMAISADLLLGWLQRSLNRARA"
     gene            complement(1220..1981)
                     /locus_tag="VE783_08260"
     CDS             complement(1220..1981)
                     /locus_tag="VE783_08260"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HYX53432.1"
                     /translation="MNAPLAIEFVNVQYRTAANRVLLSDLNLSVNRGEILVLLGPSGS
                     GKTTTLKLVNRMLDPTAGQVRVDGRATTDWDAISLRRRIGYAIQEGGLFPHYSVFENV
                     ALVPRLEKWKTARANQRVEEVLNLVGLPTAEFAGRFPHELSGGQRQRVGLARALAADP
                     PFLLMDEPFGALDPMTRAGLQREFKELQQSLQKTVIFVTHDVAEGLLLADRIAVLDGG
                     KLCGIYSRSEFLSSADAAVGPYLEAIKTIQASLER"
     gene            complement(1908..2306)
                     /locus_tag="VE783_08265"
     CDS             complement(1908..2306)
                     /locus_tag="VE783_08265"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53433.1"
                     /translation="MRLDYLSCLLTIGSTVLIGRRVWQGWLVAGINSAIICCIGLRTG
                     QWGFVPANLFCIAIYVYNVRQWRREEMAPAALSQTAVQSDRLIEFPAAQQPESVRPHH
                     PRRRSADERTARNRIRERAVSDRRESRTSL"
     gene            2591..5056
                     /locus_tag="VE783_08270"
     CDS             2591..5056
                     /locus_tag="VE783_08270"
                     /inference="COORDINATES: protein motif:HMM:NF014606.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SLBB domain-containing protein"
                     /protein_id="HYX53434.1"
                     /translation="MRRISIFYIGWFLVLGLGVACAQVNASLPQKDDSIDETGASLQD
                     ERPQQRPTPGAQINNPGSEQDQQGQNRQRSTVDDRANPENTLQQRTREVQRPLPPEPD
                     IEFQEFVTNSLGYRLRIFGRNLFQEAPSTFAPLDRVPVTPEYLIGPGDELIVRAWGQI
                     EINNYHAVVDRNGSIYLPKVGAISVAGLRFDQLHEALRSAIGRVFRNFELSVTMGQLR
                     SIQVLVVGQARRPGNYTVSSLSTLVNALFASGGPSNRGSMRHIELKRQGKTIADFDLY
                     DLIIRGDKSHDVQLLPGDVIYIAPVGPLVAMGGSVNVPAIFESKPQDTVGDLLAYAGG
                     LASTAAGQHALVERIDDRQVRRTLEIPLTAEGLKQPVKDGDVVRFLHISPRFESTVTI
                     RGNVAVPGRYPWHEGMRVKDLIPNRDFLIREDYWRRQNRLGLQPQQPIGRAAGRSDSR
                     AMSPANASDQRYPQDQRDQGSQEQRNSQEQLNRAEPVEEPRRIREEDLKNDIQRSAAD
                     INWQYAVIQRLNPQDLTTALLPFNLGKAIAGDPEQNLALQSGDIVTIFSQYDIQVPAA
                     QRSKFIRLEGEFNAAGVYEAEPGETLRHLISRVGGFTPQAYLYGAEFTRESTREDQQR
                     RLDQYILELEQAIERRGSGQRNLSADEIVAEQQAIESQRRLIERLRQLRATGRVVLDL
                     TPSNGTISALPDLPLEDGDRLIVPFRPATVNVIGAVYNSGSFMYRPGKSAKDYLNLSG
                     GANKDGDRGRIFVIRADGSTVGHSSSGFFTAGVESLRLMPGDSVVVPEKLDKGAGLRA
                     FRDWTQIITQFVLGAAAVKVLMD"
     gene            complement(5111..>6866)
                     /locus_tag="VE783_08275"
     CDS             complement(5111..>6866)
                     /locus_tag="VE783_08275"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53435.1"
                     /translation="ERIMHWRERLEAKRQQWRQRPFGRLVSHFMMRFFSGGTGDSAEG
                     EMGMGVGTVLALLASPGGFITIFLFQKYSSLDRFLRGRTNFDPYVASLPDQYFFLTLS
                     FCITGIVTVLKWDSIFPDRRDYMNLAPLPLPTRQIFLANLAAILAIAAIFAFDVNAVS
                     AIFFPMLVTMEQPTFMAYVHFASAHVLGVLLASMFVFFALFAVIGTLMVLLPQTFFKR
                     ISLYLRVGLVTLLLLLLSTCFAVPPLLRGPAGVPHWVTYLPPVWFLEFARSLIGRAEP
                     AAMWLGGYALHAWFGSLSVAAVVYVWSYYRYFIKIPEMLETTAPRRGGSANLFRFLDG
                     WLLRSPAECAIYRFTLKTLLRNERHAMLAGGFAGLGLVMASQTLMSGFAAKPSAIPNV
                     DFLAAPFILVYFVVCGLRFVFELPAEIRANWLYQVVAQQDCSELVAIARKAILTFVWP
                     WLIVAGVIYGRGWGWQTAVAHMLLSVGVSYCLADLLLLRFAKIPFTCSYSAWQQGATV
                     MAVIYAFGLFVFASVIPGIEHDLLRRSPLGVIGFACLILGGWLWFRRWTMEEFAQPRV
                     LFEDESSPVVATLNLSGR"
BASE COUNT         1509 a         2019 c         2112 g         1226 t
ORIGIN      
        1 ccccagatcc atgacgcggg gcgcttcgcg aaagttcagg ccgtacgttc gtacaaggcc
       61 cttgtagccg tcttcgcgct ccaggaattc gtagccaact cccattcgca actgggatga
      121 tgccgcgccg agctgagaaa gtttcgtcaa ccccaggcgg cgcgcatcgt cgccgcgcat
      181 tacgatcgcg aagctgttat cgaatccgag ggagggcagc acctgcaagc cgaagcgctc
      241 cgcgtacatg cgccgtacga tctcctgcac ctgtgagtga tcctcaggta ttctctgctt
      301 cagcaccgca gccagcgccg tgccggtgta ttcgacatag agatcgattc gtccggcaag
      361 cagcgcctgc tggcagatat acgtcccagc gagatagaaa cggcgatcca ccggagcgat
      421 cttcaaccct tccagatact gcgccagcaa ttcacctagc aaaagctgct cggtaaagtt
      481 tttggagccg actgtaatgc cgcttgcgtg ggcacgacag cccagcaatg ccagcgctgc
      541 gccgcataca aatgttcggc ggtccatgtc aggcgcgagc ccgattaaga ctgcgctgaa
      601 gccagccgag cagcaggtcg gctgagatcg ccatcaacgc ggcagggatt gcgcccgcca
      661 tgatcacgcg gttatccacc atggaaacgc cgcgaaagat aaattctccc aggcctcccg
      721 cgccgatggc cgcagcaatg gtggccaccc caaccgtaag caccgtcgca acgcggattc
      781 cggcgacgat cacgttggcc gccagcggca gctctacttt ccacaggagc tggccatttg
      841 tcaggcccat ggcggtagcg gcttcgcgga cgggagcgtc cactccggtg atcccgacat
      901 aggtgttctg cacgatgggc aggagcgcgt aaagcgtgag cgcaacaatg gccagccggt
      961 cagcgcgtgc tccgagccag ggcagaggca gcagcaatcc gaacagggcc aggctgggga
     1021 tggtctggat tacgccggtc gctcccagca ccgcattctt ccacgccggc ctgcgggtga
     1081 gaaatatccc ggcggggaca ccaatcagga tcgccagcgc cacagagacg ccgaccagcc
     1141 acaggtgctc ggcgccgagc gtcgcaatct catgtttgcg gtcaaagaga aatttgagca
     1201 cgcctacacc tctcagatgt catctctcca ggctggcctg gatggttttg attgcttcaa
     1261 ggtacggccc taccgctgcg tcggctgagg acaggaactc gcttcgcgaa tagattccgc
     1321 aaagcttccc gccatcaagc accgcaatcc tgtcggccag taagaggccc tccgctacat
     1381 cgtgggtcac gaaaatgacg gttttctgca ggctctgctg cagctctttg aactcgcgtt
     1441 gcagtccggc gcgggtcatg ggatcaagcg ccccaaacgg ttcgtccatc agcaggaatg
     1501 gaggatcggc tgccagcgcg cgtgccagcc ccacgcgctg tctttgtccg cccgagagtt
     1561 catggggaaa tcggccggca aactccgctg tcggcaagcc gactaagttc agtacttctt
     1621 ccacgcgctg gtttgcgcgc gcagtcttcc atttctctag ccttggcacc agggcgacgt
     1681 tttcgaaaac gctgtaatgt ggaaagagcc cgccttcctg tatggcgtaa ccaatccggc
     1741 ggcgcaggct gatcgcgtcc caatcggtgg tcgcgcgtcc gtcaacgcgc acctgccccg
     1801 cagtgggatc aagcatgcgg ttgacgagct tgagtgtggt ggttttgccg gaaccactgg
     1861 ggcccagcag cacaagaatt tcgccgcggt ttacgctgag gttgaggtca gagagaagta
     1921 cgcgattcgc ggcggtccga tactgcacgt tcacgaattc gattgcgagc ggtgcgttca
     1981 tctgcgctgc gccggcgtgg atgatgcggc ctcacgctct ccggctgctg ggctgcggga
     2041 aactcgatca gcctatcaga ctggacagcc gtttgcgaca gggcagccgg cgccatctct
     2101 tcgcgacgcc actggcgcac gttgtagacg tagatcgcaa tgcagaagag gttggccggc
     2161 acaaagcccc attgtcctgt acgcaggcca atgcagcaaa taattgcact gttgatgccg
     2221 gcaaccagcc agccctgcca tactctgcgt ccgatcagca cggtcgagcc gatcgtcagc
     2281 aggcaagata agtaatccaa acgcatcagc cgaagcagag aaccagagta gctgcttctt
     2341 tgatacgacg ttttctccgg aggcgatatc agagaaacac actattgaat aacggaacta
     2401 ccctcatgaa ggtaacgtga cctcagaagc agttaaccct gttgcataag ggccgagtgg
     2461 gccgctttgc taggcaatgc atcgcaacgt gagttatagt ttccgcagct gttaactttc
     2521 aatcgaatgt ggccctggag cttccggccc gatgctttcc cgggcgcaac tccttctgcc
     2581 agagaagcgc gtgcgacgaa tctcaatctt ctatattggc tggttcctcg tcctcggtct
     2641 gggcgtcgcc tgcgctcaag tgaatgcctc cctcccacaa aaagatgatt ccatcgatga
     2701 gactggggcg tccctgcagg acgaacgtcc gcagcagcga cccacgccgg gcgcacagat
     2761 caacaacccg ggcagcgagc aggaccagca ggggcaaaac cggcagcgca gcacggttga
     2821 tgaccgtgcc aacccggaaa atactttgca gcagcggacg cgtgaggtgc agcgcccgct
     2881 tcctcccgag ccggatatcg aattccagga atttgtaacc aactcactcg ggtaccggct
     2941 ccgtattttt ggccgcaatc tctttcagga agcgccctcc acttttgcac cgctggaccg
     3001 cgttcctgtc acgcccgaat atctgatcgg cccgggcgat gagctgatcg tccgcgcctg
     3061 gggacagatt gagatcaaca actaccacgc ggtggttgac cgcaacggct ccatttatct
     3121 gcccaaggtg ggtgcgatca gcgtggcggg gctgcgcttt gatcagctgc atgaggcgct
     3181 cagatcggcg atcggcaggg tgttcaggaa ttttgaactc agcgtcacca tgggccagct
     3241 gcgctcgatt caggtgctgg tggtgggaca ggcacggcgg cccggcaatt acaccgtgag
     3301 ctcgctgagc acgctggtga atgcgttgtt tgcttccggt ggcccttcga atcgcggctc
     3361 catgcggcac atagagctga agcgccaagg gaagacgatt gcggatttcg acttgtatga
     3421 cctcatcatc cgcggcgaca agtcccatga cgtgcagctt ctgcccggtg acgttattta
     3481 tatcgcgcca gtgggtccgt tggtggccat gggcggcagc gtcaacgtgc cggcgatctt
     3541 tgaaagcaag ccgcaggaca cggtcggaga cctgctggca tacgccggag ggcttgccag
     3601 caccgccgca ggccaacatg cgctggtgga gcgcattgac gatcgtcagg ttcgccggac
     3661 gctcgaaatc ccgcttacgg ctgaaggcct caagcagccg gtaaaggatg gcgatgtggt
     3721 ccgcttcctc catatttcac cgcgttttga gagtaccgtg accattcgcg gcaacgtggc
     3781 tgttccgggg cgctatccgt ggcatgaagg aatgcgggtg aaggacctga tcccgaaccg
     3841 ggatttcctg atccgcgaag attactggcg ccgtcagaac cggcttggcc ttcagccgca
     3901 gcagccgatt ggaagagccg ccgggcgcag tgattcgcgt gccatgtctc cggcaaatgc
     3961 cagcgaccag agatatccgc aggaccagcg cgaccaagga tcacaggaac agcggaactc
     4021 tcaggagcaa ctcaatcgcg ctgagcccgt ggaagaacca cgccgcatac gcgaggaaga
     4081 cctgaagaat gacatccagc gttccgcggc ggacatcaat tggcagtacg cggtgatcca
     4141 gcggctcaac ccgcaggacc tgaccaccgc gctgctgccg ttcaacctgg gaaaggccat
     4201 tgcgggagac cccgagcaga acctggcgct gcagtcgggc gatatcgtca ccatcttttc
     4261 ccaatacgat attcaggtgc ctgctgccca gcgcagcaaa ttcattcgcc ttgagggcga
     4321 gttcaacgct gcgggcgtct acgaagctga gccgggggag acgctgcggc atttgatctc
     4381 gcgcgtggga ggctttactc cgcaggcata cctctatggg gcggagttca cgcgcgaatc
     4441 cacgcgagag gaccagcagc gccggcttga ccagtacatc cttgagcttg agcaggccat
     4501 cgagcggcgc ggctccgggc agcggaacct gtcggctgat gaaattgtgg cggagcaaca
     4561 ggcgattgag agccaacggc ggctgatcga gcggctgcgt cagttgcgcg caaccggccg
     4621 agtggtgctg gacctgactc cctccaatgg caccatcagc gccctgcctg acctgccgct
     4681 ggaagatggc gaccggctga tcgtaccttt ccggcccgcg accgtgaacg tgatcggcgc
     4741 ggtctacaac agcggatcat tcatgtacag gccgggaaag agcgcgaagg attacctgaa
     4801 tctctctggc ggagccaaca aagacggaga ccgcggccgg atattcgtaa ttcgtgccga
     4861 tggctcaacc gtcgggcact ccagctcagg cttttttacc gccggggtgg aatcgctgcg
     4921 cctgatgccc ggtgacagcg ttgtggtgcc ggaaaagctc gataaaggcg ccggcctccg
     4981 cgccttcaga gactggaccc agatcatcac ccagtttgtt ctaggcgccg cagcggtaaa
     5041 agtactgatg gactagaagg ccgcaagaca atctcattag tactgattcg ccggaagtct
     5101 tcaggaacgt tcaacgcccg gaaaggttca gcgtcgcgac gaccggtgag ctctcatctt
     5161 caaagaggac gcgcggctgc gcgaattctt ccatagtcca gcgcctgaac cagagccaac
     5221 cgcccagaat taaacacgcg aagccgatca cgcctaacgg gctgcggcgg agcaggtcat
     5281 gctcgatgcc gggaatgact gaggcgaata cgaacagccc aaaggcgtag atcaccgcca
     5341 tcacggtggc gccctgttgc catgcggaat aggaacaggt gaaagggatc ttggcgaagc
     5401 ggagcaggag aaggtcggcg aggcagtagc tgacgcccac cgataggagc atatgcgcaa
     5461 ctgctgtctg ccagccccaa ccgcggccgt agatcacacc cgcgacaatg agccagggcc
     5521 agacgaaggt gaggatggct ttgcgtgcga tggcgacgag ttctgaacag tcctgctggg
     5581 ccacaacctg gtagagccaa ttggcgcgga tttctgccgg aagctcgaag acgaatcgca
     5641 gcccgcagac gacgaagtag acaaggatga agggcgcggc aagaaaatcg acgtttggaa
     5701 tagccgacgg tttggcggca aagccggaca tgagtgtctg cgaagccatg accagtccga
     5761 gccctgcgaa tccgccggcc agcatggcgt ggcgttcgtt gcgcagcaat gtcttcagag
     5821 tgaagcggta gatggcgcac tcagcgggag agcgcagaag ccagccatcg aggaagcgga
     5881 agaggtttgc gctgccaccg cggcgcggag cggtggtctc cagcatctcc gggattttga
     5941 tgaagtaacg gtaatagctc caaacgtaaa ccacggcggc gaccgacagc gagccgaacc
     6001 atgcgtgaag tgcgtagccg cccagccaca tggcagccgg ctcggctctc cctatcaggg
     6061 aacgcgcgaa ttccagaaac cagaccggcg gcagatatgt cacccagtgc ggaacgcctg
     6121 cggggccgcg cagcagcgga ggcacggcaa agcaggtgga gagcagcagc aggagcagcg
     6181 tgacaagtcc gacgcgcaga tacaacgata tacgtttgaa gaatgtctgg ggcagcagca
     6241 ccatgagcgt gccgattacg gcaaaaagag caaagaagac aaacatgctg gccagcagca
     6301 cgccgagcac gtgcgcggaa gcaaagtgaa cgtaagccat gaaggtgggc tgctccatgg
     6361 ttaccagcat gggaaagaaa atggcggaga cggcatttac gtcgaaggca aagatcgcgg
     6421 caatggcgag gatggcggcg aggttggcga ggaagatctg ccgcgtgggc aatggaagtg
     6481 gcgcaaggtt catgtaatcg cggcggtcag gaaagatact gtcccacttc aagactgtga
     6541 caatgccagt gatgcagaag gacaaggtca ggaagaaata ctggtcgggc agcgaggcca
     6601 catagggatc gaaattggtg cggccgcgga ggaagcggtc cagcgatgag tatttctgga
     6661 agagaaagat ggtgatgaag ccgccgggtg aggccagcag cgccagcacg gttcccacac
     6721 ccatgcccat ctcaccctcg gctgagtcgc cggtgccacc gctaaagaaa cgcatcatga
     6781 agtgagaaac caggcggccg aatggcctct gccgccattg ttgccgcttt gcttccagcc
     6841 gctcgcgcca gtgcattatg cgctca
//
LOCUS       DASQYP010000257         6238 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_52107, whole genome shotgun sequence.
ACCESSION   DASQYP010000257 DASQYP010000000
VERSION     DASQYP010000257.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 6238)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6238)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6238
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_52107"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1278
                     /locus_tag="VE783_08280"
     CDS             <1..1278
                     /locus_tag="VE783_08280"
                     /EC_number="1.11.1.6"
                     /inference="COORDINATES: protein motif:HMM:NF012425.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004096 - catalase activity [Evidence
                     IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="catalase"
                     /protein_id="HYX53436.1"
                     /translation="KFPDVIHALKPDPVTFRQEPNRIFDFMSQTPESMHMLTHVFSPR
                     GIPASYRHMEGFGVNTYKMVNAAGDTVLVKYHFHPRCGVASLTAAEAEKVQGKEMGSA
                     SKDLFEAINRGESPQWDMFVQIMEDSDHPELDWDPLDDTKIWPEQQFPLRHIGVMTLN
                     RNVADHHNENEQIAMGTGVLVDGLDFSDDKMLVGRTFSYSDTQRYRVGPNYLQLPVNQ
                     PKGVNGAVHTNQRGGQMSYGLDLARGQNPHVNFEPSIHNGLHEAQHKPNNPPEVRGTL
                     TQSVIERRNDYIQARARYCTMQDWERDELVNVLGNQLSQCERDVQERMVWHLLLVHDD
                     YGNRVGKAIGITADNVKSLGPLPNQVLTQQDEARLKKLGNNGDRIDSTAWGKWTSSVP
                     NYQARAEEVLSGMKDVRLTPTSVATQETELKAG"
     gene            complement(1548..1955)
                     /locus_tag="VE783_08285"
     CDS             complement(1548..1955)
                     /locus_tag="VE783_08285"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53437.1"
                     /translation="MLALVLVLDFVLPFPVAITIMVTLVIPITLDFPLAVVVAIFVPV
                     PVTFPFSFTVSIALLGGGVVAASPFSECRQAGKSGGSHNKDECPYQLPQVPLHIRILS
                     CIGFGAIKFGRFHLKMPCAIQQVAPRALVGWLA"
     gene            2078..3049
                     /locus_tag="VE783_08290"
     CDS             2078..3049
                     /locus_tag="VE783_08290"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53438.1"
                     /translation="MNWAWRIILCCATVAALFIVSAHAQTAGDAVNFKNIHQRSDQAS
                     DERGLTAYEDLRGVFDSAGSLLKVDSSAGYDFNRHLGVFAGLPFYMAHDSINGGPSAN
                     PFRSGMGDVYFGADVHLPAGVVDYSTSITLAAPTGRVSDGFSTGHFTADWNNRLRHSF
                     GRVAPYVSAGFGNTVPDSPQLTRTFSSRGSIFHSEEGLDVNLTRRVYAGGAAYQIIPF
                     GRQEIFNRLDLVAQTRDGKGGGNNHPGTEPGDNGAPGTGITGDQPTIAGNDLTREHGF
                     DAWLGFEPTRVVRMEIGYSRSFTFALNRLSFDVGINIGRLLRTPSAH"
     gene            complement(3132..3389)
                     /locus_tag="VE783_08295"
     CDS             complement(3132..3389)
                     /locus_tag="VE783_08295"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53439.1"
                     /translation="MLQVTKEQLLQMDTVILAVMCKKLWQNSETERAVAEKAHGMLDE
                     WIEITERKIPVTAKVADYDKRLADIVDLKDRMAEFLWPYVK"
     gene            complement(3470..3859)
                     /locus_tag="VE783_08300"
                     /pseudo
     CDS             complement(3470..3859)
                     /locus_tag="VE783_08300"
                     /inference="COORDINATES: protein motif:HMM:NF013033.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0004800 - thyroxine 5'-deiodinase activity
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="deiodinase-like protein"
     gene            complement(3872..4240)
                     /locus_tag="VE783_08305"
     CDS             complement(3872..4240)
                     /locus_tag="VE783_08305"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53440.1"
                     /translation="MPDAAAISEREARPSRRSKAVTTLMVTLALLAIVWLIGCGMIYA
                     EMRKPPEQFGRFMTRIPAPVAFLAFPFETMWLRARAGSLKVGDPAPDFSLVKLNESAS
                     VQLSQLNADKPVVLVFGSYT"
     gene            complement(4233..5048)
                     /locus_tag="VE783_08310"
     CDS             complement(4233..5048)
                     /locus_tag="VE783_08310"
                     /inference="COORDINATES: protein motif:HMM:NF024242.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family transcriptional regulator"
                     /protein_id="HYX53441.1"
                     /translation="MERAVVRESTIRAHYEAVRRAITAMRDQIDQPLSLQSLARIGVA
                     SPYHFTRTFRRVTGLPPFQFLSALRLDAARQLLLHTRRKVIEICYDVGYSSLGTFTRT
                     FTHAFGVSPRTFRTLAERDSRAITGPVGLTLRDRSRTTGPTLSGRITTAQGFNGIICV
                     GIFPTPIPQSKPMACCIAAEDGSYRIHDVPQGRWFLFALGLPYPLAASDCVAPESALR
                     GGGHALSIAGEDICGETDLVLRPALETDPPILLLLPNGIRKRKNKRNGSRAYA"
     gene            complement(5096..5530)
                     /locus_tag="VE783_08315"
     CDS             complement(5096..5530)
                     /locus_tag="VE783_08315"
                     /EC_number="3.1.2.-"
                     /inference="COORDINATES: protein motif:HMM:NF024675.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016790 - thiolester hydrolase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA thioesterase"
                     /protein_id="HYX53442.1"
                     /translation="MKFYEYRQVAGFEETNLTGNVYFTNYFKWQGRAREHFLREHVPE
                     ILEQIETGLALITLRCSCNFLGELKAFDEVSVRMFLEEINQNRITMRFEYWKLGTEPE
                     LVARGEQQIACMRRGRNGTLLAASVPEPLRHALSGYMEAISA"
     gene            complement(5527..>6238)
                     /locus_tag="VE783_08320"
     CDS             complement(5527..>6238)
                     /locus_tag="VE783_08320"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53443.1"
                     /translation="AWTRSGGIAVAHERAHEGDDFTYDLFIHDLEGHVRERWTGLHLR
                     GVGKTALPACWPSALLSAYLERRLAELIPLAQIAVQISNCACDKDSTTLAHRPDGKPV
                     DPQNSDVHLSRSHCAGLTLAVRSRQPVGCDMEQIVTRGEDAWGRLVGPQWLAFASTLA
                     QRTRTSLDAAATHAWTLKEALRKSGAGSDQPLQFESHTNDGWSVSSSGHFRAAIFKTR
                     IKGLEHELAFCFVGKKQP"
BASE COUNT         1334 a         1842 c         1762 g         1300 t
ORIGIN      
        1 aagtttcctg acgtgattca tgccctcaag cccgatccgg tcaccttccg ccaggaaccc
       61 aaccgtattt tcgacttcat gagccagacg cccgaatcca tgcacatgct tacgcacgtg
      121 ttcagcccgc gcggaatccc cgcgagctac cggcacatgg aaggctttgg cgtgaacacc
      181 tacaagatgg tcaacgccgc cggagacacc gtgctggtga agtatcactt ccatccgcgt
      241 tgcggtgtcg cgagcctgac ggcagcagaa gccgaaaagg tgcagggcaa agagatgggt
      301 tcagcctcaa aggacctttt cgaagccatc aaccgcggcg agtccccgca gtgggacatg
      361 ttcgtgcaga tcatggaaga tagcgatcat cctgaactcg actgggatcc gcttgacgac
      421 acgaaaatct ggccggagca gcagttcccg ctgcgccata tcggcgtcat gacgctgaac
      481 cgcaacgtgg ctgaccatca caatgagaat gagcagattg ccatgggcac gggcgtgctt
      541 gtagatggcc tcgacttctc tgatgacaag atgcttgtcg gtcgaacctt ctcatattcg
      601 gatacgcagc gttatcgcgt tggtccaaac tatctgcagc ttcccgtcaa tcagccgaaa
      661 ggcgtgaacg gcgccgtgca taccaatcag cgcggcggcc agatgtcata tggtctggac
      721 ctggcccgcg gacaaaatcc gcacgtcaat ttcgagccat ccatccacaa cggactccac
      781 gaagcgcagc acaaacccaa taaccccccc gaggttcgcg gcacgctcac gcaaagcgtg
      841 atagagcggc gcaatgacta cattcaggcg cgtgcccgct actgcaccat gcaagactgg
      901 gagcgcgacg aactggtcaa cgtcctcggc aaccaactct cgcagtgcga gcgcgatgtc
      961 caggagcgca tggtctggca cctgctgctc gtgcacgatg attacggcaa ccgcgtgggc
     1021 aaggcgatcg gcatcaccgc agacaatgtg aagagcctgg gcccgcttcc caatcaagtg
     1081 ctgactcagc aggatgaagc ccgcttgaag aagctgggca acaatggcga tcgcatcgac
     1141 tccacagcct ggggcaagtg gacgagctcc gttcccaact accaggctcg tgctgaagag
     1201 gtgctgagcg ggatgaagga tgttcgtctc acgccgacat cggttgccac ccaggaaacg
     1261 gaactgaaag ccggctgacg cgcgatgaaa ttcgcgcagc atgccctctg aaaaatccat
     1321 cacagcaaca aacgcccgcc ggttgaactg atccggcggg cgttgtcttt ttacgtcgcc
     1381 tcagaaaatc cagcagagac tctcgattcc tgttccacgc cttgcagtca cttgtctcac
     1441 ctactgtgtg gaactttttc gggcgattag gttccgcgcc aggagcagcg gaggagcaaa
     1501 tcctccgctc tcttcataaa tcgcggtaag cataatagct cgatgaatta cgcaagccag
     1561 ccgacaaggg ctctgggcgc aacctgctga atagcacagg gcatctttaa atgaaatcgc
     1621 ccaaatttaa tcgccccaaa accaatgcag gaaaggatac gaatatgcaa cggaacctga
     1681 ggcagttgat atgggcactc atccttgttg tgggagccac cactttttcc ggcctgccgg
     1741 cattcgctga aaggcgaggc ggccacgact cctccaccca gcagcgcgat cgagaccgtg
     1801 aaagagaacg ggaacgtgac cgggaccgga acaaagatcg caaccacgac cgcgagcggg
     1861 aagtcgagcg tgatcggaat caccagcgtg accatgatcg tgatcgcgac cgggaacggg
     1921 agcacgaagt cgagcacgag caccagggcg agcacgatcg ctaggttgct ccgtcactaa
     1981 cccctgaatc ccaacggaat gtgcagaggc gcgattaggc gtcgtgtctc tgccgttctc
     2041 ctgcaaagcg cacacttcga agaaaaagga gagacccatg aactgggctt ggagaatcat
     2101 tctttgctgc gcgactgtgg cagcgctgtt tatcgtttct gctcacgcgc agaccgcggg
     2161 agatgccgtg aactttaaga acatccacca gcgttctgat caagccagcg acgagcgcgg
     2221 cttaaccgct tatgaagatc tccgcggagt tttcgattcg gcaggttcgc tgctcaaggt
     2281 ggactcatcc gccggctacg attttaatcg ccaccttggt gtcttcgccg ggctgccgtt
     2341 ttacatggcc cacgactcca tcaatggtgg tccatctgcg aatccgtttc gctccggcat
     2401 gggcgacgtc tattttggcg ccgatgttca ccttcctgcc ggagttgtcg attactccac
     2461 atcgattacc ctcgccgctc cgactgggcg tgtgagtgat ggcttcagca ccggccactt
     2521 caccgccgac tggaacaacc ggctgcgtca ctcgtttgga cgtgtggcgc cttatgtaag
     2581 cgctggcttc ggcaacacgg ttccggatag tccccagctc acacgcactt tctcttcccg
     2641 gggaagcatt ttccattctg aagaagggct cgacgttaac ctcactcgcc gcgtctacgc
     2701 gggcggtgcg gcgtaccaga ttattccgtt tggccgtcag gaaattttca accgtctgga
     2761 tctcgttgct caaacccgcg acggcaaagg tggcgggaac aaccaccccg gaacagaacc
     2821 tggcgataac ggtgctccgg gcacggggat tactggagat cagccgacga tcgccggcaa
     2881 tgacctcacg cgtgagcatg gcttcgacgc ctggctgggc tttgagccaa cgcgggtggt
     2941 ccgcatggaa atcggttatt cgcgcagttt cacgtttgca ctgaatcgtc tctcgttcga
     3001 tgttggaatc aacatcgggc gactcttgcg cacaccttcg gcgcattaat gcttcaattg
     3061 caggatgagg tacgggcgga tgaacaggaa ggaaaatctt tgcacggcag ggccggattg
     3121 tggcgggcct gctatttcac atagggccag aggaattcag ccatgcggtc tttgagatca
     3181 acaatgtctg ccagccgctt gtcgtaatct gccaccttcg cggtcacagg aatcttgcgc
     3241 tccgtgatct cgatccattc gtcaagcatg ccgtgcgctt tctccgccac agcccgttcg
     3301 gtttcggagt tctgccagag cttcttgcac atcacggcga gaattaccgt gtccatttgc
     3361 agaagttgct ctttggtgac ttgcagcatg gatcaatttt agcaggattc ccgctccggc
     3421 agcgaatgaa acgcggagag ttccctcctt ggggacatgg gggcctttgc tacttgggca
     3481 agcctttgaa ggtgctttgc aatgctgctt ccagctcatc aggtttaaag ccaaagggtc
     3541 cgggcctgct tttgaaagcc actctcccgc tgtgatcgat cacataaatg cggtctggcc
     3601 atgccgaata tgctgcttcg gttgagttgc cgaactcatc caccaccgca gggaagccga
     3661 tcttgagttt ccgcacgcag gtggttgcca cgctcgttct ctcctgtcca tctttcgggc
     3721 tggcgtagac cacttggtcc tttatattgc tctgcatctg ccacacgtca ctgggatgcg
     3781 cctcagtgat gtacaccatc aaaaaggccg ctctgtcctt gtactgctcg taaagattgt
     3841 tgatagcggg agcctcccgc cggaacggcg gtcaggtata actcccaaac accaggacca
     3901 caggtttatc ggcattcagt tgcgagagct gaacgctcgc gctctcattt agcttcacca
     3961 gcgaaaaatc aggagctgga tcaccgactt tcagggagcc tgcgcgcgct ctcagccaca
     4021 tcgtctcaaa cggaaaagcc aggaatgcca ccggagccgg gattctggtc atgaaccgtc
     4081 cgaattgttc cggcggcttg cgcatctctg catagatcat cccgcacccg atcagccaga
     4141 ctattgcaag caatgccagc gtaaccatga gggtggtcac cgcttttgat ctcctgctgg
     4201 ggcgcgcctc gcgctctgaa atcgcagcag catcaggcat aggctcggct cccattacgc
     4261 ttgttctttc ttttcctgat cccattggga agcaggagca ggatgggtgg gtctgtctcc
     4321 aacgcggggc gcagtaccag gtccgtttcc ccacagatat cctctccggc tatcgagaga
     4381 gcgtggccgc cgccgcggag cgccgattcc ggagccacgc agtcgctcgc cgccagtgga
     4441 tatggtagcc cgagcgcgaa gagaaaccat ctgccttgcg gaacatcatg gattcgatag
     4501 gaaccgtctt cagcggcaat gcagcacgcc atcggcttcg attgcggaat gggtgtaggg
     4561 aagattccga cgcaaatgat gccgttgaat ccctgcgctg tcgtgatccg gccggagagc
     4621 gttggccccg tggttcgcga acgatcgcgg agcgtcagtc caacggggcc cgtgatcgcc
     4681 cgcgagtctc tctcggccag cgttcggaac gttctcggcg aaactccgaa cgcgtgcgtg
     4741 aacgtacgcg taaatgtccc caggctgctg tagcccacgt catagcagat ttcgatcact
     4801 ttcctacgcg tatgcagaag caactgccgt gcagcatcga gacgcaacgc cgagagaaat
     4861 tggaagggtg gcagcccggt tacccgccgg aaggtgcgtg tgaagtggta cgggctggca
     4921 acgccaatcc gggccagcga ctgcaatgag agaggctgat cgatctggtc acgcatcgcg
     4981 gtaatcgccc gccgcacagc ttcatagtgc gctcggatcg tagattcgcg cacaacggct
     5041 cgctccatgt tccgtacctc cggctgatga tctttctgaa gaagcgttag gatgactaag
     5101 ctgaaatggc ttccatataa ccagacaagg cgtgccgcag tggttccggg acggaggcgg
     5161 ccagcagtgt gccgttccgg ccacggcgca tgcaggcgat ctgctgctcg ccgcgggcca
     5221 caagctccgg ctcggtgcct agcttccagt attcgaatcg catggtgatg cggttctggt
     5281 ttatttcctc caggaacatg cgcacgctca cctcgtcaaa tgccttgagc tcgcccagaa
     5341 aattgcagga acaacgcagc gtaatgagtg cgagcccggt ctcaatctgt tccaggatct
     5401 ccggaacatg ctcacgcagg aagtgctcgc gcgcgcggcc ttgccacttg aagtagttgg
     5461 tgaagtagac gttcccggtg aggttcgtct cttcaaatcc ggccacctgt cgatattcgt
     5521 aaaatttcac ggctgctttt tccccacgaa acagaaggca agttcatgct caagcccttt
     5581 aattctggtt ttaaagatcg ccgccctgaa gtggccggaa gacgaaacgc tccagccgtc
     5641 gtttgtgtgc gattcaaatt gaagcggctg gtccgatcct gccccggatt tgcgcagggc
     5701 ttcttttaag gtccacgcat gcgtggcggc cgcatccagg ctggttctgg tgcgctgggc
     5761 aagcgtgctt gcgaaggcca gccactgcgg tccaacaagg cggccccagg catcttcgcc
     5821 gcgcgtcaca atctgctcca tatcgcaacc cacgggttgt cgcgagcgga cggcgagcgt
     5881 cagccctgcg caatgagagc gtgacaggtg aacgtctgag ttctgaggat ccactggctt
     5941 accatcaggc cggtgcgcga gcgtcgtaga gtctttatcg cacgcacaat tggaaatctg
     6001 gaccgcgatc tgtgccaatg ggataagctc agcaagccgc cgttcgaggt atgccgagag
     6061 aagcgccgat ggccagcagg caggaagtgc ggttttgccg accccgcgca ggtgcagccc
     6121 ggtccagcgt tcgcgaacgt gcccctccag atcgtggatg aacaagtcat atgtgaaatc
     6181 atcaccctca tgcgctcgct cgtgagctac cgcgatcccg ccgcttctcg tccacgca
//
LOCUS       DASQYP010000258         2190 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_78490, whole genome shotgun sequence.
ACCESSION   DASQYP010000258 DASQYP010000000
VERSION     DASQYP010000258.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 2190)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2190)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2190
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_78490"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(561..944)
                     /locus_tag="VE783_08325"
     CDS             complement(561..944)
                     /locus_tag="VE783_08325"
                     /inference="COORDINATES: protein motif:HMM:NF015898.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0045892 - negative regulation of
                     DNA-templated transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="BlaI/MecI/CopY family transcriptional regulator"
                     /protein_id="HYX53444.1"
                     /translation="MPGPKLTRLELQIMDALWSRGSASIRELQESFPEKDRPAYTTIQ
                     TMVYRMEAKKAVRRVRKVGNFHIFEPAVSRSAAQRKLIDDLLSIFGGRTQPVMAHLIE
                     SGKLTLEDIKEAEKTLRSLEKKDKS"
     gene            1174..>2190
                     /locus_tag="VE783_08330"
     CDS             1174..>2190
                     /locus_tag="VE783_08330"
                     /inference="COORDINATES: protein motif:HMM:NF017464.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M13 family metallopeptidase N-terminal
                     domain-containing protein"
                     /protein_id="HYX53445.1"
                     /translation="MKSSHRIHASLALACVVLPLLFLAAQQPAAQPKTHGIAVNNMDK
                     SVAPGDDFYDYANGGFLKRTQIPPDRPNVGVFSQLSDISNKRTADLIQEMAKSKAAPG
                     SSAQQIADLYNSFLDEATIEARGLAPLKPHLDAINSVKDTKELSRALGETLRADVDAL
                     NNTNFHTPNLFGLWTAPGFADSDHYTAYFMQGGLELPNREYYLGDSRHMKEVREGYQK
                     HIAEMFKLAGIGDGEARAARIVELEHSIAEKHWSLADNNDIHKANNPWKKADFAAKAP
                     GLDWAEYFLAAGLDKQEELTVWQPSAIIAESALVGSVPLETWKDWLTYHLIEDYSNVL
                     PKALA"
BASE COUNT          516 a          645 c          588 g          441 t
ORIGIN      
        1 tccgaaaatt ccgggctcaa gagacgccgc tgataagcgt gtttcgatcg gcccgcgaat
       61 acccagggca agttcaagcc ggcgaagtgc tgcgacttcg cgacctttct tcaagggcac
      121 cgcaacccgt aatgcgcgcg aaagccgttt ccagcgaaca aaccagaaga gcagaacagc
      181 cgtaaacccg gccaaccaca ggcacgcacc caacattggg gctgccccga gcacacggtg
      241 cagaaagtca gccgtggctg ccgcgtgggt ggactgagcg tgagggaacg gctcacccgc
      301 cacctcgacg atcgtgtaaa acccagtccg cgagtcggaa ctttgtctcg agaaagaatt
      361 gccgaggctg attagcaatg agaacggcag taagaacttt actgacgcaa ctaaccataa
      421 ccagtaacgt gttctggcct gattcctacg cagcatcaaa gtcagcgctc cagccgcggc
      481 agcgaacagc gtagactgcc atagatgatt gccaacggca ggccagacag cctgccacga
      541 accggacaag tagctcgcga tcatgatttg tccttctttt ccaggctgcg caaggttttc
      601 tcggcttcct tgatgtcttc cagagtcagc ttccctgatt cgatcaggtg cgccattacc
      661 ggctgtgtgc gtccgccgaa gatagacagc agatcgtcaa tcagtttgcg ctgcgcggcg
      721 ctgcgcgaga cggccggttc gaaaatgtga aagttgccga ctttgcggac gcgccgcact
      781 gcttttttcg cctccattcg atacaccatg gtctggattg tggtgtaagc cggtcggtcc
      841 ttctcgggaa aactctcctg cagctcacgg atggaagcgc tgccgcgcga ccaaagcgcg
      901 tccatgatct ggagttcaag tctggtcagt ttgggtccgg gcataagcga atctcttcta
      961 ctacttcggt ttgttaaatt actacatatg tagtttttgt caagagcgaa atttcccatc
     1021 gtctgatgcg atctacaatg gaaagaccgg tagtggtgca aactgcacca ctaccgaaag
     1081 acctgatgcc cggcaaccgt ggccaaaacc atttagaata gccagttttg ccgctgaaac
     1141 cgtcagccgc aggggcagtc taactcaacg actatgaaat cttcacacag gattcacgct
     1201 tctctcgcac tcgcgtgcgt tgttcttccg cttctgttcc tcgctgcgca gcagcccgcc
     1261 gcacagccga agacccacgg catagccgta aacaacatgg acaagtcggt tgcacccggc
     1321 gatgacttct atgattacgc caacggcggc ttcctgaagc ggacgcaaat tcccccggac
     1381 cgcccgaatg tgggagtatt cagccagctc agtgatatca gcaacaagcg gacagccgac
     1441 ctgattcagg aaatggcgaa gagcaaggcc gcgcccggct caagcgctca gcaaatagcc
     1501 gatctttaca actcctttct ggacgaagcc accattgaag ctcgcggtct ggcgccgctg
     1561 aagccccatt tggacgcaat taactcggtc aaagacacaa aagagctgtc acgcgcactc
     1621 ggcgaaacgc tgcgcgcgga tgttgacgcg ctgaacaaca ccaacttcca cacgcccaat
     1681 ctttttggcc tgtggaccgc cccgggcttc gccgactccg atcattacac ggcttatttc
     1741 atgcagggcg ggctggaact gccgaaccgt gagtactatc tcggcgactc gcggcacatg
     1801 aaagaggtcc gcgaaggcta tcagaagcac attgcagaga tgttcaagct ggccggcatt
     1861 ggtgatggtg aggctcgtgc cgcccggatt gttgaactgg agcactccat cgcagaaaag
     1921 cactggagcc tggccgacaa caatgacatt cacaaggcca ataatccctg gaagaaagct
     1981 gacttcgcgg ccaaggctcc tggcctggac tgggcggaat atttccttgc cgccggactg
     2041 gataagcagg aagagctcac ggtttggcag cccagcgcaa tcatcgccga atcggccctc
     2101 gtcggttctg ttccactgga gacctggaag gactggctta cctaccacct gatcgaggat
     2161 tactccaacg ttctgcctaa agcgctggcg
//
LOCUS       DASQYP010000259         9111 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_267589, whole genome shotgun sequence.
ACCESSION   DASQYP010000259 DASQYP010000000
VERSION     DASQYP010000259.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 9111)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9111)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9111
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_267589"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            326..526
                     /locus_tag="VE783_08335"
     CDS             326..526
                     /locus_tag="VE783_08335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011555276.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cold shock domain-containing protein"
                     /protein_id="HYX53446.1"
                     /translation="MEQGTVKWFNAAKGFGFITRQSGEDVFVHFSAIQSNGFRSLEEG
                     QAVEFTVTKGKKGWQAENVRAL"
     gene            692..1705
                     /locus_tag="VE783_08340"
     CDS             692..1705
                     /locus_tag="VE783_08340"
                     /inference="COORDINATES: protein motif:HMM:NF005495.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HYX53447.1"
                     /translation="MRDVRNKVVVITGASSGFGRGVAEKFVRNGAHVVLAARRGNLIE
                     RLANKLQRKGIRALAVETDVSDRGQVEALAEHTLREFGRIDVWINNAGVATYGRFNDS
                     PMEEHEQVIKTNLLGPMYGSRVALEQFRRQGHGTLVNVGSFAGVASLPYGASYTASKH
                     GIRGFGTALRQELEANGESATIHVCTIEPTSMDTPFFEHAANHTGHEVKPIPPVYDPQ
                     LVIDAIYDVTLNPKPEVVVGRRGKVGKLVSKIAPVTMEKQMAHRTHKAMIESSPWSTD
                     SPGNLFAPMHSGSGIRGGWSRSSTGGKIANTLMSLGLSAAAGWGLWKWSQQAQASRRP
                     QAA"
     gene            1814..1987
                     /locus_tag="VE783_08345"
     CDS             1814..1987
                     /locus_tag="VE783_08345"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53448.1"
                     /translation="MKTLLKAMRYFHYAIGITAPSKEQEKIILLVWIGVALGLVGIAV
                     LFIVFAVPHILQH"
     gene            complement(2019..3056)
                     /locus_tag="VE783_08350"
     CDS             complement(2019..3056)
                     /locus_tag="VE783_08350"
                     /inference="COORDINATES: protein motif:HMM:NF015948.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF362 domain-containing protein"
                     /protein_id="HYX53449.1"
                     /translation="MALNRRDFLKSASALGGAALLAPEMLRGFSNVAFAAETTAHVAF
                     VKTTDRAAGVAKAIDLLEMKRFGGKDLFIKPNFNSADAAPGSTSQDTLAALVKKLKTM
                     GAGPLTIGDRSGMGNTREVMEKKQAFTLGKELGPKVVVFDDLKDDDWEHISEPQSHWQ
                     KGFAVPRLVRNAGGIVQTCCLKTHRYGGHFTLSLKNSVGLAAKFVPGDSYNYMRELHS
                     SADQRRMIAEINAAYKPDLIVLDGIQSFVTGGPDTGKLVDSHVVLAGNDRIAIDAVGV
                     ALLRYFGTTEEVSKGTIFEQEQIARAVQLGIGVSSPKQIELVTGDKESAEYAKQIRAI
                     LDGAPGAKLTA"
     gene            3189..4898
                     /locus_tag="VE783_08355"
     CDS             3189..4898
                     /locus_tag="VE783_08355"
                     /inference="COORDINATES: protein motif:HMM:NF009233.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HYX53450.1"
                     /translation="MPAPSYVCGASELPLLGETIGQRFDAAVSQWPDREALVARHQDI
                     RWTYSQLRDRVDRVVAALLSVGLQRGDRIGIWAPNCAEWIVTQYATAKLGLILVNINP
                     AYRTAELEHALRKSGCKALVSAPAFKSSDYLAMLRTLAPELGKAEADHLRSARLPDLR
                     LVIHLGDDHQPGMLRFADLTSHAGGNHAEPGGAEQQRLHQLSRELQFDDAINIQFTSG
                     TTGLPKGATLTHHNILNNAFFVAQAMGLRSADRLCIPVPLYHCFGMVMSSLACITVGA
                     TMVFPSAGFEPLAVLQAVEAERCTALHGVPTMFIAEMEHPEFKRFNLSSLRAGIMAGS
                     PCPIEVMRRVMDSMHIREITIAYGMTETSPVSFQSAIDDPIERRVSTVGRIQPHLEVK
                     IVDSEGRIVPRGTAGELLTRGYSVMLGYWDDPEQTAQAIDSAGWMHTGDLATIDHEGY
                     CNIVGRIKDMVIRGGENIYPREIEEFLFTHPAIEAAQVVGVPDPKYGEELCAWIKLRA
                     GAQITEEEVRTFCCGQIAHYKVPRYICFVQEFPLTVTGKVQKYLIRQQMMKRLQLKEE
                     QTA"
     gene            6393..9062
                     /locus_tag="VE783_08360"
     CDS             6393..9062
                     /locus_tag="VE783_08360"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53451.1"
                     /translation="MFFGFVLCAFNATAQTAADQPAFGGDIRKAIRDLGRPETAGATS
                     QSQAATGTSANPAITPPADTRGLIRIMPFGRSSGTGKTSGSTIKSLAPAGALLTYFGG
                     PVISNVQVVAVFWGPNVAAAITADGAIDQFYTDITTSRYFDELTEYTTAGIVGADGKS
                     TTSQTIGHGTFAGKFTITPSLCPGTAACTVTDAQIQTEITNQINAHALPAPQTDAQGV
                     VNTYYAIYFPPNVTISVDPTTRSCVSGGFCAYHSNTSSLIPYGVIADLSTGGCSLAGA
                     CGTGTTLQVATTVSSHEMAEAITDPQVGSASVFGPPLGWYDNPPNLGEIADLCDPGEV
                     TVKAGAATYSVEQLFSNVLGNCTSGPPNFSMPSPAGGGGPGVPFNMTLTILANEPAFI
                     TPLNYLGTVHFTSSDPGAVLPADYTFTAADAGVHTFPFTLTVLGNQTITVTDTRSSGF
                     TGTTTVNVNTTPDMTVSLHHTGNFAQGQVGATYTIVASNLGGGPTSGTVTVADTLPNG
                     MTATAMAGPGWTCAVNTVTCTRADALPAGGSYPPITLTLNISVTSSTEINIATVSGGG
                     ETVTSDNLASDPTTIVTTGGVDLGVGFTANQLFASLGDTGLTLTANVGNGGSIATSGT
                     VTLLFTLPQGMTATGISGTGWTCTVANLTCTRSDVLASAQSYPSVTITFNVALTAPLA
                     ATSISVAVSGGGTDVVPVNNTSTIPVNMERAMGIASGGGSATVLAGGSTVFRFNVFGN
                     VAAGTITFSCTGLPAAAACKFNPASVTNASVFVDTTITTTARSAAVPGSAPENRRPLG
                     VPAVFLLAGLVMASMGWIQARSSRRRLVPIFGACMVVIVTLFSGCGGGGGGSTTTTIN
                     NATQGTPAGTYNITFTATSPVGSDTRAITLTVR"
BASE COUNT         1878 a         2906 c         2386 g         1941 t
ORIGIN      
        1 ttcagcggcc acgagcgaac ggccttccat ggccagcgaa aagcccgctc cggttttggt
       61 gagccggtcg gcggccaagg agagtccggc catcagcctt cctgctcgct aagtccaagc
      121 tgctgctaat cttacaatga ctcagcagca gcatttccta tggttttgtc ctgactgata
      181 aggcaatcgt cggcagccgt gctataatga gttctgcgtt agattgaact tggtttttct
      241 gcaagcgctc ttctgcacct gccgaaacaa ctcgattttc tttccagcgt caaaaaaaaa
      301 tcaacacttc aggatttaca agaaaatgga acaaggaaca gttaagtggt tcaacgccgc
      361 taagggcttc ggttttatca cgcgtcagag cggagaagat gtattcgtgc atttctcggc
      421 tatccagagc aacggcttcc gcagtttgga agaagggcag gcggttgaat tcaccgtcac
      481 caaaggcaag aaggggtggc aggcagagaa cgtgagagcg ctgtaaagca ctcccgattt
      541 tcacgaaaag gcggcttcgg ccgccttttc ttttgccgcc actcgcgatt tttcgctctc
      601 aggcgccctg tgccaaagga catctccctc gccgtcctct ccatccgatt catggatacc
      661 tccaaacagt ccttatatat ggagcaatac catgagagat gtacgcaaca aagtggtagt
      721 gattacgggc gcctccagcg gctttggccg gggcgtggcg gagaagtttg tacggaacgg
      781 cgcgcacgtg gtgctggcag cgcgtcgagg aaacctaatt gaacgactcg caaataaact
      841 ccagcgcaag ggcatacgcg cactcgccgt ggaaaccgac gtgagcgacc gcggccaggt
      901 tgaagcgttg gcagagcaca cgctccgcga gtttggccgc atcgacgtat ggatcaacaa
      961 tgccggcgtg gccacctacg gccgtttcaa cgattcgccc atggaagagc acgaacaggt
     1021 gatcaagacc aaccttcttg gcccaatgta cggctcgcgg gttgcgcttg agcagttccg
     1081 ccgccaaggg cacggaaccc tcgtcaacgt gggatccttc gctggcgtgg catcgctccc
     1141 gtacggcgcc tcttacaccg cttccaagca cggtattcgc ggcttcggca cggcgctgcg
     1201 ccaggaactg gaagcgaatg gcgagagcgc aaccatccac gtctgtacga ttgagccaac
     1261 ctccatggac acacctttct tcgagcacgc ggccaaccac accggccacg aggtaaagcc
     1321 gattccaccg gtttacgatc cgcaactcgt tatagacgcg atctatgacg tcacgctcaa
     1381 cccgaagccc gaagtcgtag tcggacgtcg cggcaaggtc ggcaagcttg tgagcaaaat
     1441 tgccccggtc accatggaaa aacaaatggc gcatcgcaca cacaaagcaa tgatcgaatc
     1501 cagcccgtgg tccaccgatt cgcccggtaa cctgtttgct ccgatgcact cgggcagtgg
     1561 catacgcggc ggctggagcc gcagttccac cggcggcaag atcgccaaca cgctcatgag
     1621 cctgggcctc tcagccgctg caggctgggg actttggaaa tggtcgcagc aggcgcaggc
     1681 cagcaggcga ccgcaagccg cttaacctgt cagccggcta ccacgcctag ccggctctga
     1741 caaccacctc atctttataa tctgagcgac agcctggcgg gcgaagcgcc ttcgctcttc
     1801 aggcacaatc gccgtgaaaa ctctcctcaa agcgatgcgc tatttccact acgccatcgg
     1861 aatcaccgcg ccgagcaagg agcaggaaaa aatcattctc ctggtctgga tcggggtggc
     1921 gctcgggctt gttggcatcg cggtcttgtt catcgttttc gcggttccgc acatcctgca
     1981 gcattaaacc ccagtcgatc tcagcacctc gcaatccgtc atgcagtgag ctttgctccc
     2041 ggcgctccgt caagaattgc gcggatttgc ttcgcgtact ccgccgactc tttgtctccc
     2101 gtaaccagct caatctgttt tgggctgctc acgccgatgc ctagctgtac cgcgcgcgca
     2161 atctgctcct gctcaaagat cgtgcccttg ctcacttctt ccgtagtccc gaagtagcgc
     2221 agcagggcca cccccacggc atcaatcgca atgcggtcat tgccggcgag caccacgtgc
     2281 gaatccacca gcttgccggt gtcaggcccg ccggtaacaa acgactggat tccatccagc
     2341 acgatcaggt caggcttata cgcagcattg atctcggcga tcatgcgccg ctggtccgcc
     2401 gacgaatgca gctcgcgcat gtagttgtac gagtcgccgg gaacaaactt cgccgccagg
     2461 cccacagagt tcttcagtga cagcgtgaag tgcccgccat agcgatgcgt cttcaggcag
     2521 caggtctgca caatgccgcc ggcattccgc accagcctgg gcacggcaaa acctttctgc
     2581 cagtggctct gcggctcgct gatgtgctcc cagtcgtcgt ctttcaggtc atcaaacacc
     2641 acgaccttcg gaccaagctc cttgcccagc gtgaaggcct gcttcttctc catcacctcg
     2701 cgcgtgttgc ccatgccact gcggtcgcca atggtcagcg gccccgcgcc catggtcttc
     2761 agcttcttca ccagcgcggc cagcgtgtcc tgcgatgttg agccgggcgc agcgtcggcg
     2821 ctgttaaagt tcggcttgat gaacaggtcc ttgccgccaa agcgcttcat ctccagcagg
     2881 tcaatcgcct tcgccacgcc tgccgcgcga tctgtggtct tcacaaacgc cacatgcgct
     2941 gtggtttctg cggcaaaagc cacgttggag aagccgcgga gcatctccgg cgccagcaac
     3001 gccgcgccgc ccagggcaga agcactcttg aggaaatctc tgcgattcaa agccacgccc
     3061 tccttctttg gcactcattc aatgcgctag ctgtcaattc aacgcctttc atccagccat
     3121 tgcaacactg cgggccctgc ttgctaccgt catccagagc aggtaagctg tccggaaatc
     3181 gggaatctat gcctgctccc agctacgttt gcggcgcctc tgagcttccg ctgctcggtg
     3241 aaaccatcgg ccagcgcttt gacgctgcag tctcccagtg gccggaccgt gaagcgctcg
     3301 tcgcgcgtca ccaggacatc cgctggactt actctcagct ccgcgaccgc gtcgatcgcg
     3361 tagtcgcagc gcttctctcc gtcggtctac agcgtggcga ccgcatcggc atctgggcgc
     3421 cgaactgcgc ggagtggatc gtcactcagt acgccaccgc caagctcgga ctgattctgg
     3481 tcaacatcaa ccctgcgtat cgcaccgccg aacttgagca cgcgctgcgc aagtccggat
     3541 gcaaggctct cgtcagtgcg ccggcattca agtccagtga ttatctcgcc atgctgcgca
     3601 cgcttgcgcc ggaactcggt aaagccgaag ccgaccatct ccgctccgct cgacttcctg
     3661 atctccgtct ggtcatccac cttggcgacg atcatcagcc tggcatgctc cgcttcgccg
     3721 atctcaccag ccacgccggc ggcaatcacg ccgaacccgg cggcgccgaa cagcagcgtc
     3781 tccaccaact cagccgcgaa ctccagtttg acgacgccat caacatccag ttcaccagcg
     3841 gcaccaccgg cttgcccaag ggcgcaaccc tcacccacca caacatcctt aataatgctt
     3901 tctttgtggc gcaggccatg gggctccgct ccgctgaccg tctctgcatt cccgtgccgc
     3961 tctatcactg tttcggcatg gtcatgtcca gcctggcctg catcaccgtg ggcgcaacca
     4021 tggttttccc cagcgcaggc tttgagccgc tcgccgtgct tcaggcggtt gaggctgagc
     4081 gctgtaccgc ccttcacggc gtgcccacca tgttcatcgc ggaaatggag caccctgagt
     4141 tcaagcgctt caacctcagc tcgctgcgcg ccggcatcat ggccggttcg ccctgtccta
     4201 ttgaggttat gcgccgcgtc atggactcca tgcacatccg cgaaatcacc atcgcctacg
     4261 gcatgaccga aaccagcccg gtcagcttcc agagcgccat agacgatcca atcgaacgcc
     4321 gcgtctccac cgtgggccgc atccagccgc atcttgaagt caagatcgtc gacagtgaag
     4381 gccgcatcgt gccccgcggg accgccggcg aactgctcac ccgcggctac tccgtcatgc
     4441 tcggctactg ggacgacccc gaacagaccg ctcaagcgat tgattccgcc ggctggatgc
     4501 acaccggcga cctcgccacc atcgaccacg aaggctactg caacatcgtc ggccggatca
     4561 aagacatggt catccgcggc ggcgaaaaca tctacccgcg cgaaatcgaa gagtttctct
     4621 tcacccaccc ggccatcgag gccgcccagg tcgtcggcgt gcctgaccct aagtacggag
     4681 aagagctctg cgcctggatc aagctccgcg ccggtgcgca aatcacagaa gaagaagtgc
     4741 gcaccttctg ctgcggccag atcgcccact acaaggtccc gcgttacatc tgcttcgtcc
     4801 aggagttccc gctaaccgtc accggcaaag tccagaaata cctcatccgc cagcagatga
     4861 tgaagcgcct ccagctgaag gaagagcaga ccgcgtaacc tatcctctga cgcttcggca
     4921 gcaaaggtct tgccgtttga cattgcgccc gatgacgagc cattaagccc tgttccgcgt
     4981 gccctctctt cctgcctgga aaacttctcc ttagccatac tcgttgaggt atcaccaacc
     5041 tctatcctcc tgaaggaacc atcccgaacc gagaccgact gcataggagg tcgcagcgtg
     5101 aggaacctgc tccgctgccg ctgcgcgtga gccacgacgg ctcttttttc ttgtctcctg
     5161 cgtgcattac caatttcgat tatcgctgct gtttgcgcgc gatttgccat ttgccactac
     5221 gtccacggtt ccccaataat tactacttcg ttacccgtga accgtggtgg ggggagtcat
     5281 aggtcaaccc cgaaaacaaa gcacttatca gaggtcaccc cggggtcgcg ataatcgaaa
     5341 tctctacctt agcttgcttc gccatgctgc caaggtttac cttccgatta ctacattggc
     5401 cgcgggccga atgctgacgg ctgatggctg agtgcgttgc ttctgtgccg ctaattgcta
     5461 tgggcaatcg ctatttgtgg ctattcagtt gtcaaacagc gattccgcca ttctggcggc
     5521 gcctcctggg aagctttatt tcatagcccg actgctgctt cagatcttgc cgttccgatt
     5581 ccggcgatta cgttgcgatt acggcgatcc cagtcgttca tcgtgtggca aaatgccttt
     5641 gcttttccga tcaccagatc acccgatcac ccgatctgaa atcagcgttc atcaccgttc
     5701 atctgcggca aatgtttttt gcctttcgtc cccctccgtc ccgacctcgt cccggttgat
     5761 ccccgcctcg tcccaccggg atatcccaag gtgtcccgac cttgtcccaa cccggggccc
     5821 ccgacaagcc cgtgtttggc ttgttggggt ggtagctatc ccaagcttct gggtctgaac
     5881 caggtaccaa ctaccaatta ccaagtacct tgcccccaaa tcagcctaac ttacaacggt
     5941 ttcgctctac gaatcaacag cgaaaaaggt caatgtcgcc gtaggcgaaa gtacaacgca
     6001 agctattaca ccgtccaaaa tttcgttctg tagcgcaggc gccctcgcct gcgccagccc
     6061 agagtcgcca gaaatgtcca tccgccactc ggtctgctct gcacaaaggg gtgatggact
     6121 ttgcgtttgt tctgacaccc atagcttcaa ctccggagtc tgcctctcat gtgcgattcc
     6181 taagaaaatg ctgagcttgc gcagagcgtg ctgaacccgt atttgtgttg acgagcagga
     6241 actcaggttc gtacactcat tagcctaaga gcgcgttgtt gacctgcgct cacaggagcc
     6301 ccgccttgcc tcccttttca cgccctcttt tttccgctgt tccgccttca ttctctggga
     6361 aagtatttcg acgcctcagg ttgagtgccc tcgtgttttt cggatttgtc ttgtgcgctt
     6421 tcaatgccac cgcacagacc gctgccgacc agccagcctt tggaggcgat atccgcaagg
     6481 ccataagaga cctgggccgt ccggaaacgg ctggagcaac gagccagtcc caggcagcaa
     6541 cggggacttc agctaacccg gcgatcactc cgcctgccga tactcgagga ttgatccgta
     6601 ttatgccgtt tggcagaagc agcggaactg gcaaaactag tggaagcact ataaagtcgc
     6661 tggctcctgc cggagctctc ttgacttact ttggtggtcc ggtgatctcc aatgtccagg
     6721 tagtagctgt tttctgggga ccgaatgtag ctgcggcaat caccgcagat ggagctatcg
     6781 atcagtttta taccgacatt accaccagtc gatactttga tgaattaacg gaatacacta
     6841 cagcaggaat cgtgggggca gatggaaagt ccaccacgag ccagaccatc gggcatggga
     6901 cttttgctgg taagttcacc attacaccat cgttatgccc cgggaccgca gcctgcacag
     6961 tgacagatgc gcagatccag acggagatta cgaaccagat caacgcgcac gcgctaccgg
     7021 cgccccaaac cgatgcgcag ggagtggtga atacctacta cgccatatac tttccgccca
     7081 acgtaaccat cagtgtcgat cccacaacca ggagctgcgt ttcaggtggc ttctgcgcct
     7141 accattcgaa cacatccagc ctgatccctt atggtgtcat cgcggatctt tccaccggcg
     7201 gttgctcgct ggcgggagcc tgcggaaccg gaaccacctt gcaagtcgct accactgttt
     7261 ccagtcacga aatggcggaa gcaattacgg acccccaagt gggatccgct tcagtgttcg
     7321 gaccgccact cggctggtat gacaatcctc ccaatctggg agagattgcc gatctttgcg
     7381 atcctggcga ggtgaccgta aaagccggtg ccgccaccta cagcgtcgaa cagttgttct
     7441 cgaatgttct gggcaattgc acaagcgggc cgcctaactt cagcatgccc agtccggctg
     7501 gtggcggagg tcccggcgtt cccttcaata tgacgttaac cattctggcc aatgagcccg
     7561 cattcataac gccactgaat tatctgggga cagtgcattt caccagctct gatcctggcg
     7621 cggtgctgcc ggccgactac accttcaccg ccgcggatgc aggagtccat acatttccgt
     7681 tcacattaac cgttttgggc aatcagacca tcacagttac tgatactcgt tccagcggat
     7741 tcaccggcac caccaccgtc aacgtgaaca ctacccccga catgacggta agcctgcatc
     7801 acactggcaa ctttgctcaa ggtcaggtag gcgcaactta tacgattgtc gcctccaacc
     7861 tcggcggtgg gccgacttcc ggaacagtaa ctgtggcgga cactctgccc aatggcatga
     7921 ctgcgacagc gatggccggc cccggctgga cctgtgctgt caataccgtc acctgcacgc
     7981 gcgcggacgc gctcccggca ggcggcagct atccgccaat tactctcacg ctgaatattt
     8041 ctgttacttc cagcactgaa atcaacatag ccaccgtttc gggaggcggc gagaccgtta
     8101 ccagtgacaa tcttgcatcg gatcccacca ccatcgtcac caccggagga gttgacctgg
     8161 gcgtggggtt taccgcaaac cagctcttcg ccagcctggg cgataccggg ctcactttga
     8221 ctgctaacgt cgggaatggc ggaagcatcg caaccagcgg cacggtaacg cttttgttta
     8281 cgctgccaca agggatgacc gccaccggca tcagcggcac gggatggacc tgcaccgtgg
     8341 cgaacctcac ctgcaccagg agtgacgtgc tggcgtcggc gcagagttat ccgagcgtca
     8401 ccattacttt caacgtggca ctgactgctc cgctggctgc cacctccatc agtgtagctg
     8461 tctcaggcgg tggcactgac gttgtgcctg ttaacaacac gagtacgatt ccggtcaaca
     8521 tggagcgggc catgggcatc gcttccggtg gcggaagcgc tacagtcctt gccggaggct
     8581 ccactgtatt ccggttcaat gtgtttggga acgtggctgc gggaaccatt acttttagct
     8641 gcactggatt gccggccgct gcagcttgta agttcaatcc tgcatcggtc accaacgctt
     8701 ccgtttttgt tgacactacc atcaccacca cggcccggag cgccgcggtc ccaggctccg
     8761 cgccagagaa ccggcgtcct ttgggcgttc ctgcagtctt tctgcttgcc ggtctggtga
     8821 tggccagcat gggctggatt caagctcgtt ccagccggag aagacttgtt ccaattttcg
     8881 gcgcctgcat ggtcgtgata gtcaccctgt tttcaggctg cggcggagga ggtgggggaa
     8941 gcaccaccac tacgatcaac aatgcgaccc agggtacccc ggcaggaact tacaacatta
     9001 ctttcacggc tacaagccca gtaggatccg atacaagagc aataactttg accgtaagat
     9061 aaagctcgtg ttgttggaac acttttcaac tgcaagggta atagtctctt g
//
LOCUS       DASQYP010000260         4601 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_119340, whole genome shotgun sequence.
ACCESSION   DASQYP010000260 DASQYP010000000
VERSION     DASQYP010000260.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 4601)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4601)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4601
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_119340"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..218
                     /locus_tag="VE783_08365"
     CDS             <1..218
                     /locus_tag="VE783_08365"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53452.1"
                     /translation="TQEARRKQIIDQRAHAIDAARKRAEEMVKNARTELDQEVAKAKA
                     GIPQQAEVLADQIIQSVLRPAVAAGGR"
     gene            232..927
                     /locus_tag="VE783_08370"
     CDS             232..927
                     /locus_tag="VE783_08370"
                     /inference="COORDINATES: protein motif:HMM:NF012645.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP synthase F0 subunit B"
                     /protein_id="HYX53453.1"
                     /translation="MQKYVLFFTLLLSLILSGSVIGLAQEAPREHRPQAGATQPESPA
                     NEKPNSAGEGDEVKNAPSIQALARKTGMSTERAYWVSVLVNFGLVVVIIVILMRKNLP
                     GMFKARNESIYSRMEEARKSSEEARRRLTEVEGRLSRLDAEITEMRREAEDNARSEEK
                     RLQEEAEQEGRRIVASAEQEITAASGAARRELRAYAAELAVDLAEKKIRIGRETDQTL
                     VREFTDQLGKDGK"
     gene            928..1470
                     /gene="atpH"
                     /locus_tag="VE783_08375"
     CDS             928..1470
                     /gene="atpH"
                     /locus_tag="VE783_08375"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR01145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000275 - mitochondrial
                     proton-transporting ATP synthase complex, catalytic sector
                     F(1) [Evidence IEA];
                     GO_component: GO:0045261 - proton-transporting ATP
                     synthase complex, catalytic core F(1) [Evidence IEA];
                     GO_component: GO:0045262 - plasma membrane
                     proton-transporting ATP synthase complex, catalytic core
                     F(1) [Evidence IEA];
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP synthase F1 subunit delta"
                     /protein_id="HYX53454.1"
                     /translation="MAAVAGRYARAFAEVVADQKMDPEKTVHEFRELATLVEQNQELR
                     NIFQSPAVEHKQKISLLDAIIKKTGGSKMLRNFVAVLIDKQRIGEIGEIFQQFRRDLD
                     ARMGIADAQVQSARELSAPERKALETQITAVSGKRVRATYTEDPSLLGGAVVRVGSTI
                     YDGSVRGQLQRMKQQIVGAN"
     gene            1643..3190
                     /gene="atpA"
                     /locus_tag="VE783_08380"
     CDS             1643..3190
                     /gene="atpA"
                     /locus_tag="VE783_08380"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009304822.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000275 - mitochondrial
                     proton-transporting ATP synthase complex, catalytic sector
                     F(1) [Evidence IEA];
                     GO_component: GO:0045261 - proton-transporting ATP
                     synthase complex, catalytic core F(1) [Evidence IEA];
                     GO_component: GO:0045262 - plasma membrane
                     proton-transporting ATP synthase complex, catalytic core
                     F(1) [Evidence IEA];
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit alpha"
                     /protein_id="HYX53455.1"
                     /translation="MAQIKADEITKLIREQIENYESKVTVDEVGTIISLGDGIARVHG
                     LDKVMAGELLDFGHGVAGIAMNLEEDQVGSVLLGDYTEAREGGEVKRTGRIMSVPTGN
                     GMVGRVVNALGQPIDDKGPITPDKYIPVERIAPGVIERQPVREPMATGLKAIDSMIPV
                     GRGQRELIIGDRQTGKTAVALDTIINNKGNNLICIYCAIGQKRSSIAQVVQKLQDYGA
                     MDYTIVVAASASEPAPMLYLAPYAACAMGEFFRDNGKHALVIYDDLSKHAAAYREISL
                     LLRRPPGREAYPGDVFYLHSRLLERAAKMSDKLGGGSLTALPVIETQANDVSAYIPTN
                     VISITDGQIFLETDLFNSGVRPAVNVGISVSRVGGSAQIKAMRQVAGRLKLELAQYRE
                     LAAFSQFGSDLDKATQNQLNRGSRLVEILKQDQYQPLPFSKQILIIFAGTNGYLDDIP
                     VNQIRDFEAELYRFVDASYPQLGSTIMEKKTIDDALKADIEKAIKQFKERFVSERQPA
                     GAAAKVG"
     gene            3194..4228
                     /gene="atpG"
                     /locus_tag="VE783_08385"
     CDS             3194..4228
                     /gene="atpG"
                     /locus_tag="VE783_08385"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR01146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000275 - mitochondrial
                     proton-transporting ATP synthase complex, catalytic sector
                     F(1) [Evidence IEA];
                     GO_component: GO:0045261 - proton-transporting ATP
                     synthase complex, catalytic core F(1) [Evidence IEA];
                     GO_component: GO:0045262 - plasma membrane
                     proton-transporting ATP synthase complex, catalytic core
                     F(1) [Evidence IEA];
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP synthase F1 subunit gamma"
                     /protein_id="HYX53456.1"
                     /translation="MANLLDIRRRIRSVKNTRQITKAMQMVSAAKLRRAQERALQARP
                     FTQMMTNLLKSLVSRVEIYDADTGEARNPLLERREERTALLIVVSGEKGLAGAFNSNI
                     LKAAQTFIDAKQGKNIDLITVGRKARDFFRRRYPVAAGEGRKGQIQIVAEYVGLMNRT
                     QLSSANEISDKVCKLFTDRAVDSVYIVFNEFKSVISQRVVVDDVLPVSTIGEQTREAE
                     EFVSDVEKARRGEAALHAGVSLKAPDTSEIDRRAAAFASAPVDYIYEEPPEKLFADLL
                     PRYILTLIFRAMLESEAAEHAARMTAMDSATNNASDMIDGLTLQMNRVRQAKITKEII
                     EIVSGAAAAE"
BASE COUNT         1074 a         1274 c         1454 g          799 t
ORIGIN      
        1 agacccagga agcgcgccga aagcagatta tcgaccagcg cgcgcacgcg attgacgcgg
       61 cccgcaagcg cgccgaagag atggtgaaga acgcacgcac agaactggac caggaagtcg
      121 cgaaggccaa agccggcatc cctcagcagg ccgaagtact ggccgatcag atcatccagt
      181 cagtgttgcg accggctgtt gcagcagggg gacggtaacc gcatggctcg gatgcaaaaa
      241 tacgtactct tcttcactct gctgctttcc ctgatcctga gcggcagcgt gattgggctc
      301 gcccaggaag ctccgcgtga gcaccgtccc caggcaggtg ctacccagcc ggagtctccg
      361 gcgaacgaga agccaaacag tgcgggcgaa ggcgacgaag tgaagaacgc gccatccatc
      421 caggccctgg cgcgcaagac cggcatgagc acggagcgtg cttactgggt cagcgtgctg
      481 gtgaacttcg ggctggtggt ggtcatcatc gtgatcctca tgcgcaaaaa ccttcccggg
      541 atgttcaagg cccggaatga atcgatctat tcgcggatgg aagaggcgcg caagagcagt
      601 gaagaggcga ggcggcggct cacggaggtg gaaggcaggc tgtcacgtct tgacgccgag
      661 ataacggaga tgcgtcgcga agcggaagac aacgctcgat ctgaagagaa gcgcctgcag
      721 gaagaagctg agcaggaagg ccgcaggatc gtagcttcgg cggaacagga gatcaccgcg
      781 gcgtccggcg cagcgcgacg tgaactgcgc gcgtacgcgg ccgaacttgc cgtggatctg
      841 gcggagaaga agattcgaat cggaagagag accgatcaga cgctggtacg cgagtttaca
      901 gaccagttgg gaaaggacgg aaaatagatg gcggcagttg caggccgtta tgcccgcgct
      961 tttgctgagg tcgtcgccga ccagaagatg gacccggaga agacggtcca tgagttccgg
     1021 gagctcgcca cgctggtaga gcaaaaccag gagctgcgca acatcttcca gagcccggcg
     1081 gtcgagcata aacaaaagat cagcctcctc gacgccatca tcaaaaaaac gggtggatcc
     1141 aagatgctgc gcaacttcgt ggcggtcttg atcgacaagc agcgcatcgg cgaaatcggc
     1201 gagatctttc aacagttccg gcgggacctg gatgcccgca tgggcattgc tgacgcgcag
     1261 gtgcagtcag cccgcgagtt gagcgcgcca gagcggaaag cgctggaaac gcagattacg
     1321 gcggtgagcg ggaagcgcgt gcgcgccacc tataccgaag acccgagtct tcttggcgga
     1381 gcggtggtac gggtgggcag cacgatttac gacggttccg tacgcggcca gcttcagcgc
     1441 atgaagcagc agatcgtggg cgcgaactag ttcgcgccag agtgggtagt gggtaaattt
     1501 ggtaattggg taagtgaaaa cctgaaccgc cagcagcaat tacgaaatta ccaaattacg
     1561 caattaccaa ttttgaggtc cgagtaggac cgttgaaaat ccagaatcta gtcccgagag
     1621 ggacgtcggc gaattaaaga atatggctca gataaaagca gacgagatca caaagttaat
     1681 ccgcgagcag attgagaact acgagtccaa ggtcacggtg gatgaggttg gcaccatcat
     1741 ctcgctcggc gatggtatcg ctcgcgttca cgggctcgac aaggtcatgg ccggcgagct
     1801 gctcgacttc gggcacggcg tggccggcat cgccatgaac ctggaagaag accaggtagg
     1861 ttccgtgctg ctgggcgact atacggaagc aagagaaggc ggcgaggtga agcgcaccgg
     1921 ccgcatcatg tccgtaccca ccggcaatgg aatggtggga cgcgtggtga atgcgctggg
     1981 ccagccgatc gacgacaagg gccccatcac tccggacaaa tacatcccgg tggagcgcat
     2041 tgcgccgggc gttatcgagc gccagccggt gcgcgagccc atggccacag gactcaaggc
     2101 cattgactcg atgatcccag tcggccgtgg acaacgcgag ctgatcattg gcgatcgcca
     2161 gaccggcaag accgccgtcg cgctggatac gatcatcaac aacaagggca ataacctgat
     2221 ttgtatctac tgcgcgattg gccagaaacg ctcttccatt gcccaggtgg tgcagaagct
     2281 tcaggactat ggcgccatgg attacaccat tgttgtggcc gcgtcggctt ccgagcccgc
     2341 cccgatgttg tacctggccc cgtacgctgc atgcgctatg ggcgagttct tccgcgacaa
     2401 tggcaagcac gcgctggtga tctatgacga tctctcaaaa cacgctgccg cctaccgcga
     2461 gatttcgctg ctgctgcgcc gtccgccggg ccgcgaagcc tatcccggag acgtgttcta
     2521 cctccactct cgcctgctgg aacgcgccgc caaaatgtcc gacaagctgg gcggcggctc
     2581 gctgacggct ctgccggtca tcgagacgca ggcgaacgac gtttctgcct acatcccgac
     2641 taacgtgatc tcgattaccg atgggcagat cttccttgag actgatcttt tcaactccgg
     2701 ggtgcgtccg gcggtaaacg tgggcatttc agtgagccgc gtcggcggtt cagcgcagat
     2761 caaagccatg cgacaggtgg cgggcagatt gaagctggaa ctggcgcagt accgcgaact
     2821 cgcggccttc tcgcagttcg gctccgacct ggataaagcc acgcagaacc agctcaaccg
     2881 cggcagccgc ctggtggaaa tcctgaagca ggaccaatat cagccactgc ctttcagtaa
     2941 gcagattctg atcatcttcg ccggaaccaa cgggtatctc gatgatattc cggtgaacca
     3001 gatccgcgac ttcgaagcag agctgtaccg tttcgtggat gcttcttatc cgcaattggg
     3061 ctcgacgatc atggaaaaga aaaccatcga tgacgctttg aaggcggaca tcgagaaagc
     3121 gatcaagcag ttcaaggagc gcttcgtaag cgaacggcag ccggcgggag cggcagcgaa
     3181 agtaggttag cgtatggcga accttctcga catccggcgg cgcatccgca gcgtgaagaa
     3241 cacgcggcag atcaccaagg ccatgcagat ggtctcggca gccaagctgc gccgcgcaca
     3301 ggagcgcgcc ttgcaggcgc ggccttttac gcagatgatg accaacctgc tgaagtcgct
     3361 ggtctcgcgc gtggagatat acgacgctga tacgggcgag gcgcgcaacc ctcttctgga
     3421 acgccgggaa gaaaggacgg cgctgctgat tgtggtttcc ggcgagaagg gattggccgg
     3481 cgcgttcaac tccaacattc tgaaagccgc acagactttt atcgatgcca agcagggcaa
     3541 gaacatcgat ctgatcacgg tgggccgcaa ggcgcgcgac ttcttccggc gccggtatcc
     3601 ggtggctgca ggcgagggcc gcaagggcca gatccagatt gtggccgagt acgttggatt
     3661 gatgaatcgc acgcagcttt cgagcgctaa cgagatttcc gacaaggtct gcaagttgtt
     3721 caccgatcgc gcggtggatt cggtttacat cgtcttcaac gaattcaagt cagtgatatc
     3781 acagcgcgtg gtagtcgatg atgttctgcc ggtctcaacc atcggcgagc agacgcgtga
     3841 agcagaagag ttcgtgagcg acgttgaaaa ggcccgccgc ggcgaagccg cactgcacgc
     3901 gggagtaagc ctaaaggccc cggacacctc agagattgac cgccgagctg cggcatttgc
     3961 ctcagcaccg gtggattaca tctatgaaga gccgccggag aagctgtttg ccgatctgct
     4021 gccgcgctac atccttacgc tgattttccg cgccatgctg gaatctgaag cggcagagca
     4081 cgccgcgcgc atgacggcca tggattcggc gaccaacaac gcgtcagaca tgattgatgg
     4141 cctcacgctg caaatgaacc gcgtgcgcca ggccaagatc acaaaagaga ttatcgagat
     4201 cgtcagcgga gcggcagccg ctgagtaaca aagcgggtga ggaactggcg agagctgtcg
     4261 cgatcgagcc agctgcgagg gcgaagcagc gcagcgttgc ggagcccttg aagaaacgac
     4321 atcattgaga ttgtgagcgg cgcagcggca gcggagtaag caaagcgggt gaggaactgg
     4381 cgagagctgt cgcgatcgag ccagttgcga gggcgaagca gcgcagcgtt gcggagccct
     4441 tgaagaaacg acgagaaggt atttattcat atggcacaaa actcaggaag cgttattcag
     4501 attgccggtc ccgccgtgga cgttcagttc agcgagagca acctgccccc gatttatgaa
     4561 gcccttcagg tcaccagcga aggcttcaag gttccgtcgc c
//
LOCUS       DASQYP010000261         4723 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_200728, whole genome shotgun sequence.
ACCESSION   DASQYP010000261 DASQYP010000000
VERSION     DASQYP010000261.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 4723)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4723)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4723
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_200728"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..352
                     /locus_tag="VE783_08390"
     CDS             <1..352
                     /locus_tag="VE783_08390"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016634893.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA];
                     GO_process: GO:0000413 - protein peptidyl-prolyl
                     isomerization [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HYX53457.1"
                     /translation="TIFHRVIPDFMIQGGDPSGTGMGGPGYKFQDETKGSPHKFDKPG
                     KLAMANAGPGTNGSQFFITVAATPWLTGNHTIFGEVVEGQDVVNNISKVKRGAQDRPV
                     KEVVLNSITIERVA"
     gene            369..980
                     /locus_tag="VE783_08395"
     CDS             369..980
                     /locus_tag="VE783_08395"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53458.1"
                     /translation="MEPIKLVIFVAAFLLLLVIGRKLSRLSETSYLQMPPRESQAALQ
                     PSASVSIARSEPVPLSPKGGPTGAEIGFPFPLPEIARDLSGKFNRPYFTNYYFENTDL
                     ILGPPEPRAFFDAFFLQAQEPEDQYTWTYHYTVATPDGLAKLLEKERFDSVYFDNPVV
                     IVSEWDLPLILQTITDEVLKNYGMKPEEKYELHPEEKVRKHAE"
     gene            complement(1438..2364)
                     /gene="mdh"
                     /locus_tag="VE783_08400"
     CDS             complement(1438..2364)
                     /gene="mdh"
                     /locus_tag="VE783_08400"
                     /EC_number="1.1.1.37"
                     /inference="COORDINATES: protein motif:HMM:NF004863.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="malate dehydrogenase"
                     /protein_id="HYX53459.1"
                     /translation="MRKKVTVVGAGNVGATCAHWLASKELGNVVLIDVLEGIPQGKGL
                     DLLEAMPIEKRDSYVIGTNDYADTANSDIVVITAGIARKPGMSRDDLLNTNFKIMQDV
                     VGKVVANSPNCILIVVSNPLDAMAQAAFKLSKFSRNRVIGMAGALDSARFRAFIADEL
                     KVSVENVTAFVLGGHGDTMVPLPRYSTVAGIPITELIPKDRLDAIVQRTRDGGAEIVK
                     YLKTGSAYYAPSAGATEMVEAILKDKKKIMPCAVYLEGEYGISGLFVGVPCKLGANGM
                     EQIIQIKLTPEEQAALQKSADSVTELVKVIGV"
     gene            complement(2392..3819)
                     /locus_tag="VE783_08405"
     CDS             complement(2392..3819)
                     /locus_tag="VE783_08405"
                     /inference="COORDINATES: protein motif:HMM:NF005610.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-dependent isocitrate dehydrogenase"
                     /protein_id="HYX53460.1"
                     /translation="MPSSYNGISLPAGGSAITFSNGKLQIPDNPIIPYIEGDGTGRDI
                     WAASQRVFDGAVERAYGGKRKIHWLEVFAGEKAFTKFNDWLPQGSVDAIRDLHVAIKG
                     PLTTPVGGGIRSLNVALRQILDLYACIRPVRYYQGVPSPVKHPEQLNVVIFRENTEDV
                     YAGIEWKQGTAEVKKLIDFLNNTMLAGTKKRIREDSGIGIKPISITGTKRLVRMAIQH
                     AIKNARRSVTLVHKGNIQKFTEGAFREWGYEVARDEFRDHVVTERESWILDNKDKNPN
                     LSVEQNAAMVEPGMEFAPESFRQEVYAEVKDVLDRIGNSHGNGAWKKKIMINDRIADS
                     IFQQVITRPAEYDILATPNLNGDYISDACAAQVGGLGIAPGANVGDQHAVFEATHGTA
                     PKYADKDVINPGSVMLSGVMMFDYLGWSEAARLIETSMESTIQQKLVTYDFERLMPGS
                     TKVKTSEFAGYIIDNMVDRRRKTAV"
     gene            3957..4688
                     /locus_tag="VE783_08410"
     CDS             3957..4688
                     /locus_tag="VE783_08410"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53461.1"
                     /translation="MTHITRFACLFLLLFSLPALASAQGKYLYKVTLVQAAPGKLPEL
                     IDLYKARAAALIAAGDEAPLWMRHSQGDHWDLMLLYPMGNYPDFYKSERLAARAKAEQ
                     MSAEKFKEDIAWQEDLFCVGPPIADLRKAFAAGGFFHVEMFVSLPGKFADLYKEREME
                     NAYAIAIKEPENFIFVRDQGAAWDIFTIGVFRDLKHYAESADVPAKDQEAAAKAAGFD
                     APSQIGPYLRRFIREHHDTLAVAVK"
BASE COUNT         1006 a         1386 c         1276 g         1055 t
ORIGIN      
        1 cactatcttc catcgggtaa tacctgactt catgattcag ggaggcgatc ccagcggtac
       61 cggcatgggt gggccaggct acaaattcca ggacgaaacc aagggttcac cgcacaaatt
      121 tgataagccc ggcaagctgg ccatggcgaa tgctggtccc ggcaccaacg gctcgcagtt
      181 ctttatcacc gtagcggcga cgccatggct taccggcaat cacaccatct ttggggaagt
      241 ggtggaaggt caggatgtcg tcaacaatat ttccaaggtt aaacgcggcg ctcaggatcg
      301 tccggtaaag gaagtcgtcc tgaactcgat caccatcgag cgggtagcct gatcaacggc
      361 tgggcccagt ggaaccgatc aagctcgtaa tctttgttgc ggcctttttg ctcctgctgg
      421 tgattgggcg caagctgtcg cgcttgagcg agacttcgta tctgcagatg ccgcctcgtg
      481 aatctcaggc ggcgcttcaa ccctcggcga gcgtttcaat agcgcggagc gaaccggttc
      541 cactctcgcc caaaggtggt cccacgggcg cggagattgg cttccccttc ccactccctg
      601 aaatcgcgcg tgatctcagc ggcaaattca atcgcccgta ttttacgaat tattacttcg
      661 agaacactga cctgattctc ggcccgccgg agccgcgtgc gttctttgat gctttctttc
      721 ttcaagccca ggaacctgag gaccagtaca cgtggactta ccactacaca gtggccactc
      781 ctgatggctt ggccaagctg ctcgagaaag aaaggtttga ttcagtctat ttcgataatc
      841 ccgtggtcat tgtctcggaa tgggacctgc cattgatcct gcaaaccatc actgacgaag
      901 tgttgaaaaa ctacggcatg aaaccggagg agaagtacga actgcacccg gaagaaaaag
      961 tgcgcaagca cgcggaataa aaaagccggc gcaagttgcg ccggccggtt tctatactca
     1021 ggatactaga agccatctca aaaatgagtt aaccagactg atggctcggg gctgttgatt
     1081 ggatcgcctg ggcgactgct ctcctgcgtg ctgaacgtag cttttgtaac tgtgtagcac
     1141 aggcgccctc gcctgtgccg gttactctct accacgttca ttgcgatata gagaatcttg
     1201 tcctcaaagt cctcctccga cctgatcagg cgatcgaatc atttatcaat ccagaaaacg
     1261 ccctatcaag acgcggcgat ttgcggcggt aaattgtcat tctgcggcac aggcgaggcg
     1321 cctgtgctac acattcaaca aacagctcta ttcaacacgc aagaaagaag ccgtccgggc
     1381 aatcagtctg cagcccgaag cggtggcagc cgggtcagct cctttatgag acagcggcta
     1441 aacgccgatc accttcacca gttcagtaac cgaatctgcg ctcttctgca gcgcggcctg
     1501 ctcctccgga gtcagcttga tctggatgat ctgttccatt ccgttagcac ccagtttgca
     1561 cggaaccccc acaaagagcc cgctgatccc gtactcgcct tccagataaa ccgcgcaagg
     1621 catgatcttc ttcttgtctt tcagaatggc ctcaaccatt tctgtggccc cggcggaagg
     1681 cgcatagtat gccgaacctg ttttcaggta cttcacgatt tcggcgcccc cgtcgcgggt
     1741 ccgctggacg atggcatcga gccggtcctt gggaatgagc tcggtgatgg gaatcccggc
     1801 gactgtggag tagcgcggca gcgggaccat ggtgtctccg tggccgccca gtacgaaggc
     1861 ggtaacgttt tccacgctca ctttcagctc gtccgcaatg aaagcacgga agcgcgcgga
     1921 atcaagcgcc cctgccatac cgatcacgcg attgcgcgaa aacttgctga gtttgaaagc
     1981 tgcctgcgcc attgcgtcca gcggattgga aaccacgatc aggatgcagt tcggtgagtt
     2041 ggccacaact ttgcccacca catcctgcat gatcttgaaa ttcgtgttaa gcaaatcgtc
     2101 gcggctcatg cctggctttc gcgcgatgcc ggcagtgatc accacgatgt cagaattggc
     2161 tgtgtcggcg taatcgttgg tgccgatcac gtaagaatcg cgcttttcga tcggcatggc
     2221 ttccagcagg tccaggcctt tgccctgcgg gatgccttcg agcacgtcaa tcaggacaac
     2281 gttgcccagt tcttttgagg ccagccagtg ggcgcaggtc gcgcccacgt tgccggcccc
     2341 taccacagtt actttcttac gcatgaattc gtcctcaagt cggagatgta tttagactgc
     2401 ggtctttctg cgccggtcca ccatgttgtc aattatgtat ccggcaaatt cgctggtctt
     2461 taccttggtt gatcccggca tcagccgttc gaagtcgtag gtgacgagct tctgctggat
     2521 cgtggattcc attgaggttt caatcagccg cgcggcctcg ctccagccaa ggtagtcgaa
     2581 catcatcacg ccggaaagca tcacggagcc cggattgatc acgtctttgt ccgcatattt
     2641 cggggccgtg ccatgtgtgg cttcgaatac tgcgtgctga tcgcccacgt tcgcgcccgg
     2701 agcgattccc agcccgccca cctgcgcggc gcaggcgtca gagatgtagt cgccgttcag
     2761 gttcggggtg gccagaatgt cgtactctgc cggacgcgta atcacctgct ggaatatcga
     2821 atcggcaatg cggtcattga tcatgatctt cttcttccac gcgccgttgc cgtgcgaatt
     2881 gccgatgcga tccagcacgt ctttcacttc cgcataaacc tcctggcgga agctctccgg
     2941 agcaaactcc atacctggct ccaccatcgc ggcgttctgc tcgactgaga ggttcgggtt
     3001 cttgtctttg ttatcgagaa tccagctctc gcgctcggtc accacgtggt cgcggaactc
     3061 gtcgcgcgcc acctcatagc cccactcgcg gaacgcgcct tccgtgaatt tctggatgtt
     3121 gcccttgtgg accagcgtaa cggaacgccg agcgttcttt atcgcatgct gaatggccat
     3181 gcgcaccaga cgcttggttc cggtgatgga gatcggcttg atgccgattc cggaatcttc
     3241 tcggatgcgc ttcttcgttc ctgccagcat ggtgttgttg aggaagtcga tcagcttttt
     3301 cacttccgct gttccctgct tccactcgat gccggcgtaa acgtcttccg tgttctcgcg
     3361 gaagatcacc acgttgagct gctcaggatg tttcaccggc gaaggtacgc cctggtaata
     3421 gcgcaccgga cggatacatg cataaagatc aagaatctgg cgcaacgcga cattgaggga
     3481 gcgaatgccg ccgcctactg gagtcgtgag aggccctttg atcgccacat gcaggtcgcg
     3541 gattgcgtcc acggatcctt gtggaagcca atcattgaat ttcgtgaacg ccttctcccc
     3601 ggcaaacacc tccagccagt ggattttccg tttcccacca taggcgcgct ccacagctcc
     3661 atcgaacacc cgctgcgagg cggcccagat atcgcggccg gtgccatcgc cttcgatgta
     3721 ggggatgatg ggattgtcag gaatctgcag cttgccgttg ctgaaggtaa tggctgagcc
     3781 gccggccggg agtgagatcc cgttgtagga agagggcatg gttcctccag agatgaattc
     3841 tttacgaatg caaacctctt aagttaacat ccgctgcgca gccgcgcaat gaactgaaaa
     3901 cgcggcaaaa tcgcataacg agcaaaaatt ttaaaggctc aggaactctg ccacctatga
     3961 cgcacatcac acggtttgcc tgcctctttc tgctgctttt cagccttcca gccctcgctt
     4021 ccgcgcaggg aaaatacctg tacaaagtca cgctggtaca ggctgccccg ggaaagctgc
     4081 cggaactcat cgacctctac aaagctcgcg ccgcggctct gatcgcggcc ggcgacgagg
     4141 cgccgctctg gatgcgccac agccagggcg accactggga cctgatgctg ctctacccaa
     4201 tgggcaatta ccctgacttt tacaagtcag aacggctggc cgcgcgcgca aaagctgaac
     4261 agatgagcgc cgagaaattc aaggaagaca tcgcctggca agaagacctc ttctgcgtcg
     4321 ggcctcctat cgccgatctg cgtaaagcat tcgcggccgg cggctttttc catgtcgaga
     4381 tgtttgtctc cttacccggc aagttcgccg acctctacaa ggaacgcgaa atggaaaacg
     4441 catatgcaat agcgatcaaa gaaccggaaa actttatctt cgtccgcgat cagggcgccg
     4501 cgtgggacat cttcaccatc ggcgtctttc gcgacctgaa gcattacgct gaaagcgcgg
     4561 atgtcccggc caaagaccag gaagctgcag cgaaagccgc aggattcgac gcgcccagcc
     4621 agattggacc ctacctgcgg cgctttatcc gcgagcacca tgacacgctc gcagtggcgg
     4681 tgaaatgaaa agacgccgat agcatatggg ctaggagtcg cct
//
LOCUS       DASQYP010000262         9545 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_244945, whole genome shotgun sequence.
ACCESSION   DASQYP010000262 DASQYP010000000
VERSION     DASQYP010000262.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 9545)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9545)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9545
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_244945"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..186)
                     /locus_tag="VE783_08415"
     CDS             complement(<1..186)
                     /locus_tag="VE783_08415"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53462.1"
                     /translation="MKCQTVFGVALLALCVVVSPMFAATPSTGTLNAPAAGSTSSIVW
                     TGGPFTGATADPSVCTSV"
     gene            complement(399..1031)
                     /locus_tag="VE783_08420"
     CDS             complement(399..1031)
                     /locus_tag="VE783_08420"
                     /inference="COORDINATES: protein motif:HMM:NF012655.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HYX53463.1"
                     /translation="MAATAPDSAQKPVPVRDRLLQAAKILFSIHGFENTSTALIARQA
                     NTSESQLIKHFGSKEGLLESIFEDGWRNLDFIAQAIKVLPSPADKLRMTFELVLQALE
                     RDQALKELMLFEGRRIRKASSGADILVTGGYLRFSTTVEQIISEMLPGSPLAEKLSPA
                     ALASALIGMFESMLRDQVLARRLGHPATSTPEEVRTVFELFVNRLLALPR"
     gene            complement(1101..1970)
                     /locus_tag="VE783_08425"
     CDS             complement(1101..1970)
                     /locus_tag="VE783_08425"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53464.1"
                     /translation="MIKIRSWHIATALALCLLPAGLLAADLKPKTTAAFDKYVVATEQ
                     RFASELKPGGPFLYIDELSADKKQDSYQRLKNGEILIDKRETKAPGISTDVPDGLVHH
                     WVALVFVPGVTLKQTIPLVQDYDHRAELYKPEVTASKLLSHQGDDYKIFLRLYQKKFT
                     TVVFNTDYDVHWGTVSPTEVFSNSISTRIAEEKEASHPDGEEYPPGHGSGYLWRLNTY
                     WRFDEKDGGVYIQCEALSLTRDIPTGLGWLLRPLVTSIPRNSLNRALGRTREVIEQHA
                     KERSGSSAAAGIE"
     gene            complement(2217..3122)
                     /locus_tag="VE783_08430"
     CDS             complement(2217..3122)
                     /locus_tag="VE783_08430"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53465.1"
                     /translation="MASLARAQENQPRANGVQVQMRNVTYHYADNIAVQIRRLGGELV
                     PIKGDFPIFDDKHSFSLQVMAAEMAISAENMANVLNQYAFARKDSPIKDASVAIVNGR
                     LKIKGKLHNKGDVSFETESTLSVTGEGKIRMHAEKVRALHLPAKGFMDLFGIEIADLI
                     KTGKVNGISAEKDDLIFDPSQALPPPHISGKITEVRLEGNNIVQVFGSPSNYKWVQVP
                     AQNYMAYHGNRLKFGKLTMEDTDLVLIDPDPRDPFDFYLDHYQEQLTAGYTKTTPQFG
                     LRVYMVDYSKLKRVPRGRGSSAGKK"
     gene            complement(3262..4653)
                     /locus_tag="VE783_08435"
     CDS             complement(3262..4653)
                     /locus_tag="VE783_08435"
                     /inference="COORDINATES: protein motif:HMM:NF012503.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class V-fold PLP-dependent
                     enzyme"
                     /protein_id="HYX53466.1"
                     /translation="MSPKLTETESLLQQAFEITMEYYSRRDQHSVFPDITPNELRKAF
                     GARTPMPQQGTDAETVISGLAKAAQRGIVAQTGPRYFGFVIGGSLPVTTAADWLTSAW
                     DQNSGLYATSPAASVVEEVAASWLLELLGLPSTASVGFVTGCGMANFTGLAAARHKVL
                     HEAGWEVELDGLNGAPPINVIVGDEVHVTVLTALRMLGLGTRGVKRVPADGQGRMIAS
                     DLRKVLNTCSGPTIVCAQAGNVNTGSFDPLVEITAAAKERRAWVHVDGAFGLWAAVSG
                     ELKHLVAGAGTADSWATDAHKWLNVPYDSGLVMCAHPEAHRSAMTVTAAYLVQSDKER
                     DPFEWTPEFSRRGRGFTIYAALKYLGREGVREMIERCCARARQMAELLRRHPDIEILN
                     DVVLNQVLVRFRKSDDFTRQVISRVQQDGTCWLGGTTWKDLAAMRVSVSNWSTTEKDI
                     ELSAAAILKAVGD"
     gene            complement(4774..5181)
                     /locus_tag="VE783_08440"
     CDS             complement(4774..5181)
                     /locus_tag="VE783_08440"
                     /inference="COORDINATES: protein motif:HMM:NF026182.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016853 - isomerase activity [Evidence
                     IEA];
                     GO_process: GO:0006725 - cellular aromatic compound
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tautomerase family protein"
                     /protein_id="HYX53467.1"
                     /translation="MPQYRCLVQANKFPREKKAELAQEITRIHCELTGAPAHFVHVLF
                     SEFSAGEWFTAGEPSGFSIINALIRSGRSDDQKSSLLAKISSGWSRISGQSKREIVVT
                     VTEMRSEHWMEAGQLMPQPGGEKEWFARLGISI"
     gene            complement(5256..5969)
                     /locus_tag="VE783_08445"
     CDS             complement(5256..5969)
                     /locus_tag="VE783_08445"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53468.1"
                     /translation="MSSRKIHLAAALLVLCVSLLRGQEAGNRSTLPDTPEPKHHSLTV
                     LQSDTAIDRVFPPPSQDARQKFRYYTQQAFRPGIYFADAFYTGLTMANPPGRYPPNWK
                     NGAEGFARNYGDFLGGWAAVQMGKFTTSCLLHEDARYIPSASSSMRKRIEHALVSVVL
                     DRSDLGQPRFAVANFAGAFAGGFVGNAYLPDHYSDLVNGMKRTGYGLWGVGSSNLADE
                     FQPEIKKILRKLHVPFSGD"
     gene            6357..7037
                     /locus_tag="VE783_08450"
     CDS             6357..7037
                     /locus_tag="VE783_08450"
                     /inference="COORDINATES: protein motif:HMM:NF013760.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MotA/TolQ/ExbB proton channel family protein"
                     /protein_id="HYX53469.1"
                     /translation="MISTIGFFVGGEILNMIRQTGLVAQTVLVILLIFSVLSWSIILS
                     KWAHLRRAREQSGRFLRAFRKAHRLQDIAAVSDQFRPSPLVPVFESAYDEYRRQGETN
                     IVAVQRASQIASSEEMSRLERKLPLLATTGAVTPFIGLFGTVWGIIDAFHGLGDAGAA
                     TLRAVAPGISEALITTAAGLFAAIPAVIAYNGFTQSLRNFGARMDDFSLEILNFIERT
                     TGIPTGVR"
     gene            7037..7474
                     /locus_tag="VE783_08455"
     CDS             7037..7474
                     /locus_tag="VE783_08455"
                     /inference="COORDINATES: protein motif:HMM:NF014525.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="biopolymer transporter ExbD"
                     /protein_id="HYX53470.1"
                     /translation="MAMSMGNGTGQGRTRPTLSEINITPFVDVVLVLLIIFMVTAPVL
                     QSGIEVNVPKTKVVKEVSEERLVISITKGQEVYLGNDHVKLDELGTMLRQKIRDPRGQ
                     SVYVRADQDVAFGAFATVMSTVKSAGITNVSIVTEPIPPGKNK"
     gene            7480..8262
                     /locus_tag="VE783_08460"
     CDS             7480..8262
                     /locus_tag="VE783_08460"
                     /inference="COORDINATES: protein motif:HMM:NF024503.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015291 - secondary active transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TonB family protein"
                     /protein_id="HYX53471.1"
                     /translation="MTYVRANLFYEREQWKKPVMLSIGFHLLLVATIVTVGFLAQPRT
                     ATNWGTNQGDAVEAQLVSAAIPIPHQEQSQNIVANESKGVTQTQPLPKPEETEDGISI
                     KGKVKPVPPKPTKTVATNVKPPHPVPTPEDTAVPYGEGGPVSGPFGNFAAPSTKGGFS
                     VQDSAFGNKYGWYIDIIRRKVQQNWLTYEIDPSIKAPHRAFIEFDITRDGSPAHVQVA
                     QSSGVPSLDQSALRAIQRIDGFGALPEGSSLHVEFWFDHPPK"
     gene            8280..>9545
                     /locus_tag="VE783_08465"
     CDS             8280..>9545
                     /locus_tag="VE783_08465"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53472.1"
                     /translation="MKTAIFVLSVVTAFLLFPAENALAQGTVKLEINMGQERPRLAVP
                     DFKQSNADPGNLPLLNSFNDTLWSDLSNAGIFDLVAKSFYPSQVPGQPNELVAKSWSD
                     PPPNAGVIAFGNLGVNSGKVDVQGWLIDVKNPGSAQILGKQYREDATVDNARLIAHRF
                     ADEIISRLGGGIPGVAETKIYFISNRSGSKEVWSMDYDGAGQKQVTKMGGIALSPRIS
                     PDNSRLAFSGLKDSWQIMMYSFDLDRLVSFPRHPGGNYSPAWSSDGTKIAFSSSMGTG
                     ASEIYIADASGAGARRLTTGKTDVSPVFNPRTNGQIAFVSGRTGLPQIYIMDADGSNV
                     QRVTDQGYAVSPSWSPNGLLLAFSWVRNYGPGVLGGADLYIMDIASKQIVQLTHDGGR
                     NDFPSWSPDGRHIVFQSTRSGSEQIWSVLA"
BASE COUNT         2028 a         2778 c         2643 g         2096 t
ORIGIN      
        1 cacgctcgtg cagacggagg ggtcagcggt ggctccggta aacggcccgc cagtccaaac
       61 aatcgaactg gtggaaccgg cggctggggc attcagcgtt ccggtagacg gtgtggcagc
      121 aaacatcgga gacacaacaa cgcacagggc cagcaaggcg accccgaaaa ccgtttggca
      181 tttcatcagg atgttcctcc gcgaagggcg cagtttacat tagtagtgct actactagcg
      241 gcagtcgaac attcggatgt atgttttcgg cggtcgggtt gttcaaagat tcagcagcag
      301 tcctggaaca tttgagatca gagttgcgct gcgaatttac attccaaact gtaggcgaaa
      361 aaggggcgtg agttggcttc tggttgcgac ttggctgctc agcgcggcag ggcgagcaag
      421 cggttcacaa acaactcaaa gaccgtgcga acttcctccg gtgtggaagt agcaggatgg
      481 ccgaggcgcc gcgccagcac ctgatcgcgc agcatgctct caaacattcc aatcagagcg
      541 gaagccagag ctgcgggaga aagcttctcc gccagcggcg acccgggcag catctctgag
      601 atgatctgct ctaccgtggt actgaagcga agatagcctc cggtgaccag aatgtctgct
      661 ccggagctgg cttttctgat gcgccggccc tcgaaaagca taagctcctt caatgcctga
      721 tcgcgctcca gcgcctgcaa caccagctcg aaggtcatgc gcagcttgtc ggctggcgat
      781 ggcagaactt tgatcgcctg cgcaataaag tccagattgc gccagccgtc ctcaaaaatt
      841 gattccagca gtccttcctt actgccgaag tgtttaatca gctgcgattc gcttgtgttg
      901 gcttggcggg cgatgagcgc cgtagaggta ttctcaaaac cgtggatgga aaacaggatc
      961 ttggctgcct gtaggagacg gtccctgacc ggaaccggtt tctgcgccga gtctggtgcc
     1021 gtggccgcca tggagcgcac gttaccagaa ctgctgccgc agagtcaacg ctgcttctga
     1081 ttttagaagt gatgctactt ctactctatt cctgccgctg cgctactgcc gcttcgctct
     1141 ttcgcgtgct gctcaatcac ctcgcgcgtt ctacccaaag cgcgattcag cgagttccgc
     1201 ggaattgatg tcaccaacgg cctgagcagc cagccaagcc cagtcggaat atcccgcgtg
     1261 agggaaagcg cctcgcactg gatgtacact ccgccgtctt tctcatcgaa tcgccagtag
     1321 gtattgagcc gccacaaata gccgctgccg tggcccggcg gatactcctc tccatcaggg
     1381 tgcgacgcct ccttctcttc agcaatgcgc gtactgatcg agttggagaa aacttcagtc
     1441 ggactcacgg ttccccagtg cacgtcatag tcggtattga acactacggt cgtaaatttc
     1501 ttttggtata gccgcaagaa gattttgtaa tcatcaccct ggtgcgaaag cagctttgac
     1561 gccgtgacct ccggcttgta aagctcggcg cgatgatcgt aatcctgtac cagagggatc
     1621 gtctgcttca gcgtgactcc gggaacgaat accagcgcca cccaatgatg taccaagcca
     1681 tcaggtacat cggttgagat tccaggtgct ttggtctcgc gcttatcaat caggatctcg
     1741 ccgttcttaa ggcgctgata cgaatcttgt ttcttatccg cgctgagctc atcaatgtag
     1801 agaaaagggc cgccaggttt gagctcgctg gcaaagcgct gctcggtcgc cacgacgtat
     1861 ttatcaaatg cggccgtggt tttgggtttc aggtcggctg ctaagagccc agcagggagt
     1921 aggcacaggg ccagagccgt ggctatatgc cacgagcgaa ttttgatcat gatggtataa
     1981 acccgggctc ctgctggaga gcccgccttc cattcaaatc cgaagcagct aatttggcaa
     2041 ccgccggaag ccaattacaa gcacgttgcg acttttccgt tttgcacacc tactcccaat
     2101 gccgtgagac tcgcatctaa aatatacgag atgggtgatg gagcaggttt ttaccgtttc
     2161 cctgctaaac ggtggccgaa gcagaacggt gtcaggtctc cgtacatcac cctactttat
     2221 tttttccctg ccgaagatcc gcgtccccgc ggcacacgct tcagcttgct gtagtccacc
     2281 atgtacacac gcagtccgaa ctgaggtgtg gttttggtgt acccggcagt gagctgctcc
     2341 tggtagtgat cgagataaaa atcgaatgga tcgcgcggat ccggatcaat cagcaccagg
     2401 tccgtatctt ccatggtgag cttcccaaac ttcagccggt tgccgtggta cgccatgtaa
     2461 ttttgcgccg gcacctggac ccatttgtag tttgagggcg agccgaacac ctgaacaatg
     2521 ttgtttccct ccagccgcac ctccgttatc ttcccggaga tgtggggcgg aggcaatgcc
     2581 tgagaaggat cgaagatcag atcatctttc tctgcgctga tgccattcac cttcccagtc
     2641 ttgatcaggt ccgcgatttc aatcccaaag aggtccatga agccctttgc cggaaggtgc
     2701 agcgcccgga ccttctccgc atgcattctg atttttcctt ccccggtgac gctaagcgtg
     2761 ctttcggttt caaaactcac gtcgcctttg ttgtgcagct ttcctttgat cttcagacgg
     2821 ccattcacga ttgccactga agcatccttg atcggtgaat ctttcctcgc gaacgcgtat
     2881 tggttcagaa cattagccat gttctcggcg ctgatcgcca tctccgcggc cataacctgc
     2941 agggaaaaag agtgcttgtc gtcaaagatg gggaagtcac cctttattgg caccagttcg
     3001 ccgccgagcc ggcggatttg caccgcgatg ttatccgcat agtggtaggt cacgttgcgc
     3061 atctgcacct gcacgccatt agcgcgcggt tgattttcct gggctcgcgc aagtgaggcc
     3121 attagagcca gtaagactgc gccggccccc cacgctcgca tgctcctgac acaaggtatg
     3181 tacatgagct gcttggaacc agaaaagctg accagggttg gtcaagcgtt tggggactct
     3241 aggtcagcaa agggggcgcg gctaatcgcc aaccgccttt aggatggccg ccgcggaaag
     3301 ctcgatgtct ttctcggtgg tggaccagtt gctcacggag acacgcattg cggcaaggtc
     3361 tttccatgtg gttccaccta accagcaggt tccgtcctgc tgaacgcggg aaatcacttg
     3421 gcgggtgaaa tcatcggact tgcggaagcg aaccagcacc tggttcagca ccacgtcgtt
     3481 gaggatctca atatccggat gacgccgcag cagttccgcc atctgccggg ctcgcgcgca
     3541 gcaacgctcg atcatctcgc gaacgccctc gcggcccaga tattttaatg ctgcataaat
     3601 ggtgaacccg cgtccgcgac gcgaaaattc cggcgtccac tcgaaggggt cgcgctcttt
     3661 gtcggactgc accagatatg ccgcggtcac tgtcatagcg gagcgatgcg cttccggatg
     3721 agcgcacatt accaatccgc tgtcgtaagg aacgttgagc cacttgtggg catccgtagc
     3781 ccacgaatcg gctgtgccgg cgccggcaac caggtgtttc aattcgccgc ttacggccgc
     3841 ccacagcccg aaagcaccgt ccacgtgcac ccatgctcgt ctttccttcg cggcagcagt
     3901 gatttccacc agcggatcga aagaaccggt gttcacgttt ccagcctgcg cgcacacgat
     3961 tgttggccca ctgcaagtgt tcaagacctt ccgtaggtcg gacgcgatca ttcttccctg
     4021 tccatccgca ggcacccgct ttaccccgcg agttccgagt ccgagcatcc gcaacgcagt
     4081 cagcacggtt acatggactt catcgcccac aatcacattg atgggcggtg cgccgttcaa
     4141 gccatcaagt tccacttccc agcctgcctc gtgcaggact ttatgccggg cagccgccag
     4201 cccggtgaag ttggccatcc cgcagccggt cacaaagccg acgctggcgg tgcttggaag
     4261 cccaagtaat tcgaggagcc atgatgctgc aacttcctct acaactgaag cagccggcga
     4321 ggtggcgtat aggcccgaat tctggtccca cgccgaagtc agccagtcag ccgcggtagt
     4381 tacaggcaga ctgccgccga tcacgaagcc gaaatagcgt ggcccagttt gcgcaacaat
     4441 tccgcgctgg gcagccttcg ccagaccaga gatcactgtc tccgcgtctg tgccttgctg
     4501 cggcatcgga gtccgtgcgc cgaaagcttt gcgcagctca ttcggcgtga tatcgggaaa
     4561 taccgaatgc tggtcgcgcc gcgagtagta ttccatggtg atttcaaatg cctgctgcag
     4621 cagcgattcc gtttccgtaa gttttgggct catttgcgcg atagacatat ccgggttctc
     4681 tccgcagttt gattctcata aactgcacaa ggacacaaag aagtttgcgg ctcagctggc
     4741 ccattcgcca ttccgtagat tgctcccgaa cttttaaatg ctgattccca gtcgggcgaa
     4801 ccattccttt tccccgcccg gctgcggcat caactggccc gcctccatcc agtgctcgga
     4861 tctcatctct gtaaccgtaa ccacgatctc gcgcttgctc tggccgctga tccggctcca
     4921 gccgctggaa atcttcgcga gaaggctgct cttttgatcg tcgctgcgtc cggatcgaat
     4981 caacgcattg atgatcgaaa aaccgctggg ctcgcctgcg gtaaaccact ctccggctga
     5041 aaattctgaa aagagtacgt gcacaaaatg cgcgggcgcg ccggtcagct cacaatgtat
     5101 tcgggtaatt tcctgcgcaa gctccgcctt cttctcccgg ggaaatttgt ttgcctgcac
     5161 caggcagcga tactgcggca tgggacctcc tgctgggtga tgcttccgat cttcaacgct
     5221 gattgtaatg gtgtaatggt tgagaacgcg gccggtcagt cgccgctaaa cggcacgtga
     5281 agcttccgca agatcttttt gatttccggc tgaaattcat ccgccagatt gctgctgccc
     5341 acgccccaca gtccgtagcc ggtacgcttc ataccattca ccagatcgct gtagtgatcg
     5401 ggaagatagg cattgcccac gaaccctccg gcaaaggcgc cggcaaaatt cgcaacagcg
     5461 aatcgcggct gaccaaggtc cgaccgatcc aatacaaccg acaccagtgc gtgctcgatt
     5521 cgcttccgca tgctgctgct cgcggatgga atgtaccggg catcctcgtg cagcaggcag
     5581 gacgtcgtga actttcccat ctgcacggcg gcccagccgc caagaaaatc gccgtaattt
     5641 cttgcaaagc cttctgcacc gtttttccag ttcggcgggt agcgcccagg aggattagcc
     5701 atcgtcagcc cggtgtagaa cgcatcagcg aaataaattc cgggccggaa ggcctgctgc
     5761 gtgtaatagc ggaatttttg tcgcgcatcc tgagagggcg gcgggaaaac gcggtcaatg
     5821 gccgtatccg attgcagaac tgtaagcgag tggtgcttcg gttcaggtgt gtccggcaaa
     5881 gtggagcgat ttccggcctc ctgtcctcgc aacagggaga cacagagaac cagcaaagca
     5941 gccgctaaat gaatttttcg cgatgacatc tcgaagttcg cagactggcg agttgcttga
     6001 ttagagccga aagagcgtct gcaggtttgc aagcgcagcc atgatcgcgg gcgcccccgc
     6061 gagccaatcg agagtgacac accggttttg gccgccggaa caggttgtcc gcgtctgaat
     6121 ggacgtgtcc caggcgaacc gcggggatgc gggcggaagc ttcgtctccg aagtcccgca
     6181 aaatcgggac ttgcccgccc gctacacatc gtgtcacgat agatgtaaag cagagctgca
     6241 gaagagggcc ttaatccgcg acttaaccct gttgagtcaa acgattcacc cgtttgacgc
     6301 gagctttccc ggatgttacg gtcaaagcat aactgctaga ggcacttgga gttgcaatga
     6361 tttcgacaat cggcttcttt gttggcggag agatcctgaa tatgatccgc cagaccggac
     6421 tggtggcgca gacagtgctc gtaatcctgc tcattttcag cgtgctctcc tggtccatca
     6481 ttctgtccaa atgggcacat ttgcggcgcg cccgcgagca aagtggccgc ttcctgcgcg
     6541 catttcgcaa ggcgcaccgg ctgcaggaca ttgctgccgt ttctgaccag ttcaggccca
     6601 gtcctctggt acctgtgttt gagagcgcct acgacgagta tcgtcgccag ggcgagacca
     6661 acatcgtcgc cgtacagcgt gcttctcaga ttgcttcgtc ggaagagatg tcccgcctcg
     6721 agcgcaagct tccgttgctc gcgacgactg gcgcggtcac gccgttcatc ggactttttg
     6781 gcacggtttg gggaatcatc gacgcattcc atggacttgg cgatgccggt gcagctactc
     6841 tgcgcgcggt ggcacctgga atttctgaag cgctgatcac caccgccgcc ggtcttttcg
     6901 ccgctatccc ggccgtaatc gcctacaacg ggtttaccca gtcgctgcgt aatttcggcg
     6961 cgcgcatgga cgactttagc ctggagatcc tcaacttcat cgagcggacc accgggattc
     7021 ccacaggagt gcgctaatgg cgatgtcgat gggcaacggc accggccagg gccgcacacg
     7081 tcccacgctt tcggaaatta acatcacgcc attcgtggac gtggtgctgg tgctgctcat
     7141 catcttcatg gttacggctc cggtgcttca atccgggatt gaagtaaacg tcccgaagac
     7201 gaaggtggtg aaggaggttt ccgaagagcg gctggtgatc agcattacca aggggcagga
     7261 agtttatctc ggaaacgatc acgtgaagct cgatgagctc ggcaccatgc tgcggcagaa
     7321 gatccgcgac ccgcgcggcc agtcggttta cgtccgcgcc gatcaggatg tcgcgtttgg
     7381 cgcctttgct accgtcatga gcacggtgaa atctgccggg atcacaaacg tgagcatcgt
     7441 caccgaacca attccgcccg gcaagaataa atagaagcta tgacttacgt gcgcgccaac
     7501 ctgttctacg aacgggagca atggaaaaag ccggtgatgc tctccatcgg cttccatttg
     7561 ttgctggtgg ccaccattgt gacagtcggc ttccttgcac agccgcgcac cgccaccaac
     7621 tggggcacga atcagggcga tgcggttgaa gcacagctgg taagcgccgc tattcccatc
     7681 ccgcaccagg aacagtcgca gaacatcgtc gccaacgaat cgaaaggggt cacgcagacc
     7741 cagccgctgc ccaaaccgga agaaaccgaa gacggcattt caattaaggg caaggtcaag
     7801 ccggttccgc cgaagccgac caagactgtg gcaacgaacg tgaaaccgcc gcatcccgtc
     7861 cctactcccg aagatactgc agtgccttat ggtgaaggcg gtccagtgag cggcccgttc
     7921 ggcaatttcg ccgcgcccag cactaagggc gggttcagcg tgcaggattc ggccttcggc
     7981 aacaaatacg gctggtatat cgatatcatc cgccgcaaag tccagcagaa ctggctgact
     8041 tacgagatcg atcccagcat caaggctcct caccgcgcat ttattgagtt tgacattacg
     8101 cgtgacggca gccctgctca tgtccaggtg gcccagtcca gcggcgttcc ctcacttgac
     8161 cagtctgcat tgagggctat tcaacggatt gacggtttcg gcgcactgcc cgaaggtagc
     8221 tcgctacacg tagagttctg gtttgatcat cctcctaaat aggcgaatta atgcaaagaa
     8281 tgaaaactgc gattttcgtg ctctcagtgg taacagcatt cctgctgttc ccggctgaaa
     8341 atgcgttggc ccagggaaca gtcaaacttg aaatcaatat gggacaggaa cggcccaggc
     8401 tcgccgttcc cgatttcaag cagtccaacg ccgacccagg taacctgccc ttgctaaaca
     8461 gctttaatga cacgctttgg agcgatctct ccaatgcagg gatcttcgat ctggtggcca
     8521 agagctttta tccatcgcag gtgcctggcc agccgaatga gcttgtggcg aaatcctgga
     8581 gcgacccgcc gcccaatgcc ggcgtgattg cgttcggtaa tctgggggtc aattccggca
     8641 aggtcgacgt tcaaggctgg ctcatcgatg ttaaaaatcc gggatcggcg caaatcctgg
     8701 gaaagcaata tcgagaagac gccacggttg acaatgcacg gctgatcgca caccgttttg
     8761 cagacgagat tatttctcga ctcggcggcg ggattcccgg cgtcgcggag accaagattt
     8821 acttcattag caaccgcagc ggcagcaaag aagtctggtc catggactac gacggagccg
     8881 gccagaagca ggtcactaag atgggcggta tcgcgctctc accgcgtatc tcaccggata
     8941 attcccggct ggcgtttagt ggcctgaaag actcctggca gatcatgatg tactcgttcg
     9001 accttgaccg actggtcagc ttcccgcggc atccgggtgg aaattactct cccgcatggt
     9061 cttctgacgg gactaaaata gcgttttcct catccatggg cacgggagct tccgagattt
     9121 acatcgcgga tgcatcaggc gccggggcca gaaggctgac caccggcaag actgacgtgt
     9181 cgccggtttt caatccccgc accaacggtc agattgcgtt tgtgagcggc cgtaccggcc
     9241 tgccacagat ctacatcatg gatgccgatg gcagtaacgt gcagcgcgtg accgatcaag
     9301 gctatgcggt ttcgccctcc tggtcaccca acggcctgct gctggcgttc tcctgggtgc
     9361 gaaattacgg gccgggagtc ctggggggag ccgatctcta catcatggac atcgcttcta
     9421 agcagatcgt ccagctcacg catgatggcg gccgcaatga ttttccttcc tggtcaccgg
     9481 atggacgtca tatagtcttt caatctactc gcagtggatc ggaacaaatc tggagcgtgc
     9541 ttgct
//
LOCUS       DASQYP010000263         4882 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_187112, whole genome shotgun sequence.
ACCESSION   DASQYP010000263 DASQYP010000000
VERSION     DASQYP010000263.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 4882)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4882)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4882
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_187112"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..988)
                     /locus_tag="VE783_08470"
     CDS             complement(<1..988)
                     /locus_tag="VE783_08470"
                     /inference="COORDINATES: protein motif:HMM:NF015448.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0004826 - phenylalanine-tRNA ligase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanine--tRNA ligase beta subunit-related
                     protein"
                     /protein_id="HYX53473.1"
                     /translation="MRIDPNWLREFVDLKVSDAQLADDITLAGVAVESVRQIDGKTLF
                     EMEIGTNRPDAMCHYGVARECSAIYDTDLKPIKPKLPKAKPVAKPFPIEIQDAEGCKR
                     YTGRVIRNVKIGPSPTHIIERLKIDDHGGVSNAVDASNYTLMEMGHPTHAFDLEKLEG
                     GKIIVRRAKVGETLKTLDGVDRKLEPEDLVIADAVKPVALAGVMGGLDSAISAGTKHI
                     LIESAWFDPATVRKTARRLGMHTDASHIFERGADWGATPLACDRVAELILQTAGGELE
                     GEPVDAVAGHVVRYSLLLRRSEIKRQLGQEIPDAQVTRMLARLGFGMKLIKGE"
     gene            complement(1090..2196)
                     /gene="pheS"
                     /locus_tag="VE783_08475"
     CDS             complement(1090..2196)
                     /gene="pheS"
                     /locus_tag="VE783_08475"
                     /EC_number="6.1.1.20"
                     /inference="COORDINATES: protein motif:HMM:TIGR00468.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009328 - phenylalanine-tRNA ligase
                     complex [Evidence IEA];
                     GO_function: GO:0004826 - phenylalanine-tRNA ligase
                     activity [Evidence IEA];
                     GO_process: GO:0006432 - phenylalanyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanine--tRNA ligase subunit alpha"
                     /protein_id="HYX53474.1"
                     /translation="MAYEVPKLDDFSPASLDKAVQELLAAVRQEADGLSGENDWKNFR
                     DRWIARKNGILTQVNDLWLKAAPGPAKRDVGARVNQLKGQVEQAVEAAQQKLASSGSA
                     AKLDAERVDVTLPGIRRPLGAEHPMLRTMNEVVGVFRAMGYSVAEGPEIETDYYNFEA
                     LNFPPNHPARDTQDTLFVAGQEKKPQRDRLLLRTHTSPVQIRSMLKQPPPIRVVIPGK
                     VHRADTADATHSPIFHQVEGLAVDTNITFSDLKGTLDHAMKSLFGSNVKTRFFPSFFP
                     FTEPSADVSITCFKCGGKGCRLCKMSGWIELLGCGMVDPNVFKFVEQNGYDSQKISGF
                     AFGMGVERITMLKYGIDDIQLFYQGDVRFLEQFA"
     gene            complement(2307..2672)
                     /gene="rplT"
                     /locus_tag="VE783_08480"
     CDS             complement(2307..2672)
                     /gene="rplT"
                     /locus_tag="VE783_08480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016290093.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L20"
                     /protein_id="HYX53475.1"
                     /translation="MPRVKRGTKRRQRRKKILERASGYFLTKSKLYRAAKESVERGLK
                     FAYSGRRQKKRQYRSIWIVRIGAASRALGLSYNQFISGLKKAGVELDRKILADIATND
                     APAFAALAETAKKANAAKA"
     gene            complement(2840..3034)
                     /gene="rpmI"
                     /locus_tag="VE783_08485"
     CDS             complement(2840..3034)
                     /gene="rpmI"
                     /locus_tag="VE783_08485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016998296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L35"
                     /protein_id="HYX53476.1"
                     /translation="MPKLKTHKGAAKRFKKTGTGKIKRHKAYKRHILTSKDTKRKRQL
                     GSATMVSDADHAKVARMIPY"
     gene            complement(3149..3730)
                     /gene="infC"
                     /locus_tag="VE783_08490"
     CDS             complement(3149..3730)
                     /gene="infC"
                     /locus_tag="VE783_08490"
                     /inference="COORDINATES: protein motif:HMM:TIGR00168.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003743 - translation initiation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006413 - translational initiation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-3"
                     /protein_id="HYX53477.1"
                     /translation="MNDRIRAREIRVIDADGNQLGVMAPFDALKRAREQNLDLVEISP
                     NAVPPVCRIMDFGKYLYEQEKKERAAKKNQKQIVLKEVKFSVNVDEHDYVTKRNHVLR
                     FLSEGDKVKASLRFRGREMAHQNLGRNVLERLIKEVGEKGIVEFRPRMEGNTMHAILA
                     PPKQVPGGKKPEGKPQQQQAPQQAVAGGGQQRP"
     gene            complement(3885..4574)
                     /locus_tag="VE783_08495"
     CDS             complement(3885..4574)
                     /locus_tag="VE783_08495"
                     /inference="COORDINATES: protein motif:HMM:NF024206.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ankyrin repeat domain-containing protein"
                     /protein_id="HYX53478.1"
                     /translation="MLDRISDGRTDLVFDYVSQGSPATSKDDKGVPLIQWCAYYGDVS
                     AIRFLLSHGETLDTLAPGRGIGAAAFHGHWQLVEFLLENGADANFTWPATGETPLHAA
                     VCSRQRSKEAHLITQVLLAYGADPNRKTKPGAETGAFMRDVRTCGETALHRAAAFADE
                     ETIQLLINHGAQIDAKDGNGDSPLSWASRHERATSVLLKLCYGDFRVNPERTSLGHYL
                     LGKPHPNKRPV"
     gene            complement(4684..>4882)
                     /locus_tag="VE783_08500"
     CDS             complement(4684..>4882)
                     /locus_tag="VE783_08500"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53479.1"
                     /translation="KGGPHPKNAPGDFYVQYGECTACGAPEPVAPDLIGWDDDPVTTI
                     AISKSSPRMLVNWNRRLMLCV"
BASE COUNT          886 a         1512 c         1340 g         1144 t
ORIGIN      
        1 cttctccttt gatcagcttc attccgaagc caagcctggc cagcatgcgg gtgacctgtg
       61 cgtcagggat ttcctgccca agctggcgct tgatttcgct gcgccgcaaa agcagtgaat
      121 aacgcaccac gtgtccggcg acggcgtcca ccggctcgcc ttccagttcg ccgcccgctg
      181 tctgcaggat cagctcagcc acgcgatcgc aagccagcgg cgttgcgccc cagtcggcgc
      241 cgcgctcaaa gatgtgcgac gcatcagtgt gcatgcccag tctccgggca gtcttgcgca
      301 ccgtagccgg atcgaaccac gctgactcga tcaggatgtg cttcgtcccg gcagaaatcg
      361 cggaatcgag gccacccatc acgccggcca gcgcaaccgg ctttaccgcg tccgcgatca
      421 ccagatcttc aggttccagc ttgcggtcga cgccatccag cgtcttcagt gtctcgccga
      481 cttttgctcg acgaacgata atcttgccgc cctcaagctt ctccagatcg aacgcgtgag
      541 tagggtggcc catctccatg agcgtgtagt tactggcgtc cacggcattg ctcacaccgc
      601 cgtgatcgtc aatcttcaat cgctcgatga tatgggtcgg cgagggaccg atcttcacat
      661 tgcggatcac gcgccctgta tatcgcttgc agccttcggc atcctggatc tcgattggga
      721 acggcttggc gacaggcttc gccttcggca gcttcggctt gatcggcttt agatctgtgt
      781 catagatcgc cgagcactcg cgcgcgactc cgtagtggca catcgcgtcg ggacggtttg
      841 tcccgatttc catttcgaac agcgtctttc catcaatctg ccggacagac tccaccgcca
      901 cgccggcgag cgtgatgtcg tcggccagtt gtgcgtcgct gaccttcagg tcaacgaatt
      961 cgcggagcca attgggatcg atacgcatca gttctcacca ccggaggcac ggagacacag
     1021 agagaacaaa acgtgaggtc acctctgcgt ctccagttcc tccgtgtttc aaagatcttt
     1081 tgagttcgat catgcgaact gttccaggaa ccgcacatca ccctgataga acaactggat
     1141 gtcatcaatg ccgtatttca acattgtgat tcgttcaaca cccatcccaa acgcaaaccc
     1201 gctgatcttc tgggagtcgt agccgttctg ttcgacgaac ttgaaaacgt ttggatccac
     1261 catgccgcag cccagcagct cgatccagcc actcatcttg cacagccggc agcccttgcc
     1321 gccgcatttg aagcaggtaa tagaaacgtc cgcgctcggc tcagtaaaag ggaagaacga
     1381 cgggaagaag cgcgtcttca cattcgaccc gaacagcgac ttcatcgcgt ggtccagcgt
     1441 ccctttcagg tcgctgaatg tgatgttcgt gtccaccgcc agcccttcca cctgatggaa
     1501 gatgggcgaa tgcgtggcat cggccgtatc cgcgcgatgc actttgcctg gaataaccac
     1561 gcgaatcggc ggaggctgct tcagcatcga ccggatctgc accggcgatg tgtgtgtccg
     1621 cagcagcagg cgatcgcgct gtggcttctt ctcctgccca gcgacgaata gcgtgtcctg
     1681 cgtgtcgcgc gccggatgat tgggcgggaa gttcaacgcc tcgaagttgt aatagtcggt
     1741 ctcaatctcc ggaccttccg caacggaata tcccatcgcg cggaacacgc ccacgacctc
     1801 attcatggtg cgcagcatgg gatgctctgc gccaagcggc cgacgaatgc ccggcaatgt
     1861 cacgtcaacc cgctcagcgt caagcttcgc ggcagaaccg gatgacgcaa gcttctgctg
     1921 cgccgcctcg actgcctgtt caacctgacc cttaagctgg ttcacccgcg cacccacatc
     1981 gcgcttcgct ggcccgggcg ccgctttaag ccacagatcg ttgacttgcg taaggatgcc
     2041 gtttttccgt gctatccagc gatcgcggaa gttcttccag tcgttctcgc ccgacagccc
     2101 atcggcctcc tgccggacag ccgccaacag ctcctgcacc gccttgtcga ggctggcggg
     2161 agagaaatcg tcgagtttgg ggacctcgta tgccattgta aaaacctaaa ccacagaggc
     2221 cacagagcaa cactgaggaa ttccgctctc cctccgtgct cctctgtgtc ctctgtggta
     2281 aaagggtgtt ctgaactgct gagggcttac gctttggccg cgttggcctt cttcgcggtc
     2341 tctgccagcg ccgcaaatgc cggcgcatcg ttcgtggcta tatccgccag gattttgcgg
     2401 tccagctcca cgccggcctt tttcagcccg ctgatgaact ggttgtagct caagccgagc
     2461 gcgcgcgaag cagcgccgat gcggacaatc cagatggacc ggtactggcg ctttttctgg
     2521 cgacgtccgc tgtaggcaaa cttgagtccg cgttcaaccg attctttggc tgcgcgatag
     2581 agttttgatt ttgtgaggaa atatccgctg gcgcgctcta atatcttttt gcggcgctgg
     2641 cggcgcttgg taccacgttt tacgcgaggc atagtgctcc tgtttcaatg ccgaattctc
     2701 ggcggttatc gcggctggag ggaaggattg ttgctcgccc tcttcgctcg cttttattgc
     2761 aggtctcgcc tctgcactga ttgctcaggc gggcaagaac tctgttccga atactagttg
     2821 ctaactgcca attgctggct tagtacggaa tcatcctcgc gaccttggcg tgatcggcat
     2881 cgctcaccat ggtggctgag ccgagctgcc tcttccgctt cgtgtctttc gaggtaagga
     2941 tatggcgctt ataagccttg tgccgcttga tcttgccggt tccggtcttc ttgaaccgct
     3001 tggctgcgcc tttatgggtt ttcagtttgg gcataatgtc gtttatccaa gggctccgct
     3061 gctgcgctgc tccgccttcg cgctgcgctc gctgcgcgct ttacccgatt tgtttctgct
     3121 ttctaatctc ttgctgctgt gtaactgctt acgggcgctg ctgaccgcct ccggccacgg
     3181 cctgctgcgg tgcctgttgc tgctgcggct tgccttcagg tttcttgcct cctggcacct
     3241 gcttgggcgg ggccaggatc gcgtgcatgg tgttgccctc catgcgcggc ctgaattcca
     3301 caatcccttt ttcgcccact tccttgatca gccgctcaag cacgttgcgg cccaggttct
     3361 ggtgggccat ttcgcgtccg cggaagcgca ggctggcttt caccttgtcg ccttcgctca
     3421 ggaaccgcag cacatgattg cgtttcgtca cgtaatcatg ctcgtccacg ttcacgctga
     3481 acttaacttc cttcagcacg atctgtttct ggttcttctt cgccgcccgt tccttctttt
     3541 cctgctcgta gaggtacttg ccgaagtcca taatccggca caccggaggc actgcattcg
     3601 gtgagatctc taccaggtca agattctgtt cccgggctct ttttaacgca tcgaacgggg
     3661 ccatgacgcc aagttggttg ccgtcggcat caatcacgcg gatttcccgc gcccggatgc
     3721 gatcattcat gcgaataaaa cgcttatcga ttcaagcctc caacccattc cgccgaatgg
     3781 gatcatcaag tctgcttgct gcgctctcag tgggagaagt gccacggagc cgacacgcgg
     3841 catagactta aaaagtatag cacggggtca atgcgatttc tgcctcacac gggccgcttg
     3901 ttcggatgtg gcttgcccag caggtagtgt cctagggaag tgcgttcggg attgacccgg
     3961 aagtcgccgt agcagagctt caggagcacg ctggtggctc gttcatgcct gctggcccaa
     4021 ctcaggggcg aatcgccgtt gccatctttg gcgtcaatct gcgcgccatg attaatcagc
     4081 aattgaatgg tctcttcgtc cgcgaatgcc gccgcgcgat gcagcgccgt ctcgccgcag
     4141 gtacggacgt cgcgcatgaa agctccggtt tctgcaccgg gcttggtctt acgatttggg
     4201 tccgcgccgt acgccagcag cacctgggtg atgagatgcg cttccttgct gcgctgcctg
     4261 gaacaaacag ccgcatgcag cggagtttcg cccgtcgcgg gccaggtgaa attggcgtca
     4321 gcgccgttct ccagcagaaa ttccacgagc tgccaatgtc cgtgaaatgc agccgcacca
     4381 atgccgcggc ccggtgccaa agtgtccagt gtttctccat gcgatagcag aaagcggatc
     4441 gcactcacgt cgccgtaata ggcgcaccac tggatcagtg ggactccttt gtcatccttg
     4501 ctcgtggcgg gactgccttg cgagacgtag tcgaacacca agtcggtacg tccgtcggag
     4561 attcggtcta gcattagacc ctccaccctg cttctcagtc cagagcgtcg gcttggccag
     4621 ccgcgcggat ttgtgtgatg atccccggat ccttgccgcg ataccgaatt gcctggcaac
     4681 agctcatacg cacagcatca agcgcctgtt ccagttcacg agcattcgcg ggctgctttt
     4741 tgaaatagca atggtcgtaa cgggatcatc gtcccatcca atcaaatcgg gagccaccgg
     4801 ctcaggcgca ccgcaagccg tacattcgcc atattggaca tagaaatccc cgggcgcatt
     4861 tttggggtga gggccgcctt tg
//
LOCUS       DASQYP010000264        20695 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_200734, whole genome shotgun sequence.
ACCESSION   DASQYP010000264 DASQYP010000000
VERSION     DASQYP010000264.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 20695)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20695)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20695
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_200734"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1621
                     /locus_tag="VE783_08505"
     CDS             <1..1621
                     /locus_tag="VE783_08505"
                     /inference="COORDINATES: protein motif:HMM:TIGR01905.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="cytochrome c3 family protein"
                     /protein_id="HYX53480.1"
                     /translation="TTYTASGNKGNALPPAGSSSSLCLSCHDGTIAPGTTVAYGTFST
                     SAKMQDVFGSNMQSTHPFSMLLPLRDAPHLVSTLTTTGQTADVTGAVKLISGNVECTS
                     CHNPHQQSIDRTVPAFLVRDSSGGQLCLSCHDPNRITSNQTNPLAQWPTSIHATAPNA
                     TTNQPSVGGYNTVAQNACSACHAEHNGSGLTELLRGANEQDCISCHNGGTNVTPAAPN
                     VFAEFSKAGALPGTAHPFPSGTNTHDASEPALLNQNRHATCADCHNPHASRQVATFPV
                     PPAIRASQNLVSGINATDGITVLNPAVNQYENCLRCHGTSTGKVASISYGYQPTRMSV
                     GGDPLNVSLQLNSGTYPPSSHPVMHTRNSPYSQPSLLTNMLKIDGVSLGRAMGTQILC
                     TDCHNSDDNREFGGVGSNGPHGSAFSHILERRYEFSQAPAPGQQVTNLFPSPDLSAKG
                     PYGLCAKCHNMTNIVSDASFNQHSRHINRGFSCSACHAAHGTGGQSSWERLVSFDLNV
                     VAPSVQGQTPLPITYSKATNSCTLTCHNHKH"
     gene            1758..2504
                     /locus_tag="VE783_08510"
     CDS             1758..2504
                     /locus_tag="VE783_08510"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53481.1"
                     /translation="MKRIAIMIIGGLLIAVLAIAFAGGKTAPAAALGPVKLTTPSASA
                     RFLASIQAHFSTGKGELQRAFGVKQQARSYRMKTITQLRRGEPMETIVEVVCPDRERF
                     ITTASGKEFHAVRIGSTGYLEREDGTWNVVTTPPSGWAPCGPDPGEPAPWAVVNEGRD
                     PTAVLAKLEGADISRGVLVSTPAGECQQWIIKLQMPGAVAHAHGSKGLEYTLCVDPKQ
                     HLPMAVAMGGTIVTSYYDWNKPIQIDPPKM"
     gene            3025..3720
                     /locus_tag="VE783_08515"
     CDS             3025..3720
                     /locus_tag="VE783_08515"
                     /inference="COORDINATES: protein motif:HMM:NF025198.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4190 domain-containing protein"
                     /protein_id="HYX53482.1"
                     /translation="MSAPNAGSPYQPLPYAPTDGKATASLVLGILSLLGFSIVAGLPA
                     VILGHISRSNISSSGGRLKGKGVALGGLITGYIGISIVPILIIAAIAIPNLLKSRQSA
                     NASSAQATIRNVNTAQVIYSTAHPEKGYALDLATLGADSSTGIDRQLSRNYCQSGTWC
                     IKSKYKYSLTGFCNVDGLCKDYVIVATPLDGNVATRSFCSTSDAVIRSKRDTVLAEPL
                     TTVDECASWDVMP"
     gene            complement(3722..5125)
                     /locus_tag="VE783_08520"
     CDS             complement(3722..5125)
                     /locus_tag="VE783_08520"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53483.1"
                     /translation="MPYILIALIPRLLAAQVPPPQTPQTGVLHPSVATLANASHSYAL
                     YLPSQYTPGKKWPVLMAFDPGGNGAEPVKAFQQAAEKFGFIVAGSNNSRNFADPTEAI
                     RLFSADLLQRYAIDKRRVYLTGFSGGARVASSIAMNCKGCVAGLIACGAGLPKGGSLP
                     TPDMGDWFLTTGTEDFNYQEVSKLYEELSSKHVAARLAIFAGPHSWLPPALAEEALAW
                     MQLRAMSRGTLLQDQQFVEAEYARRMKEAAYARDSGRALEAQRDYLQIAEDFKKLRET
                     TGAEKAAQELAHSDELRKARKNLNASLDLEEKTANKFNYTIQGLMERAAASGLLFEQL
                     ETLVSDARRRQESSRDPEQRDAVARAIAGSFALAIESGQTDMQKKDYTTAKDLFSASA
                     ILNPELPAPHLLLARAHAAMNEKKPAMEELRRAVAAGLSRPESLKDKSFDSIRGDPGF
                     QEIVEHVTAQQSKTQPQ"
     gene            5377..7203
                     /locus_tag="VE783_08525"
     CDS             5377..7203
                     /locus_tag="VE783_08525"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53484.1"
                     /translation="MKSVANAIRTICAVFVMAAYLLSFPAPAHAYDNTITFLRTDEPG
                     RWFKNTAGPVAGTQSLAVAAPGVQVRFKDGNSNAIHTVTSLIFPTGAAGMPFDTGSLQ
                     TNQQARLTLTTPGLYVFTCKIHPYMFAAVIVDDPNTAGLDLGESITLVNGITVPTSSD
                     LATRLLRTFFIATNPANWQDFSKPTWHITYPDVNVRITGGAVVNLPAVLNARYGNDIT
                     LPPLFNPATAGVGEVWVDTQFELTRQKDKPGTATSVDANSWKPTRKVALPQVDMNNPH
                     NMWTDQNQTVIYQTQWFDFRMSTFNRTTGRLVNDVTVGPDPSHVMTRTDTDHLHVALD
                     GEDSPFAVVQLTPLRPQIERSINIAEGHPHAHWMGHDGQSMVTPNTFTADSTIYDFAT
                     DSVRAIAHVGNLPIATGMMPDDSKYYVDNFLDSTMSVIDTKTGAVLKTINLLANYDPI
                     SGAISGPVGALPIQTPVSPDGRVMVTANILTDTITLIDTKTDTLVAMLPCDGGCHGVQ
                     WGAKKGGGYYAYVSTQFSNVLDVVDPNPDGSGDLTHAAVVGRVLLKTLPTTATDDQII
                     GNDGMGGQGVLPIPLVYNGWVQNLPAPFKQQLTPAQQNPIGK"
     gene            complement(7523..7780)
                     /locus_tag="VE783_08530"
     CDS             complement(7523..7780)
                     /locus_tag="VE783_08530"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53485.1"
                     /translation="MCFRPTTIRLAIGGGAKSFVVFATPDLFDSLLSGVLHWPVATGL
                     FPETRLYFFAIASDKESVVIWPDFLGELPPRVAQIFDINEY"
     gene            complement(7770..8243)
                     /locus_tag="VE783_08535"
     CDS             complement(7770..8243)
                     /locus_tag="VE783_08535"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53486.1"
                     /translation="MKTKFILALLSTMMLCGCYANMRLYPVKGALAEQSPLPSFEAKI
                     TATGDISVTLNDGEHFKGSWESVRRLDKADAASSASGNAPKSEMAEVWDAVYGQGYFI
                     AHVLGTYSHSRASIKGDRGTTLTVEFFNESEGGEHPRPGKGVAKDSRGNIYKGVF"
     gene            complement(8431..13152)
                     /locus_tag="VE783_08540"
     CDS             complement(8431..13152)
                     /locus_tag="VE783_08540"
                     /inference="COORDINATES: protein motif:HMM:NF012200.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="choice-of-anchor D domain-containing protein"
                     /protein_id="HYX53487.1"
                     /translation="MVLILMILCCASQPVHAQAAGSQSLLIVGSIGPNVPTGTSATFA
                     MTVNTLTKTVTYCECILNGQLIDNPTAIMQGLVNAFNGDTTSPVTASLTRAGITLTPK
                     VSGTFLTISSVDNGAGLGGLSGIGFLGIPIVPIQDKSSFTVVGSINANTCNGCSSTFS
                     VNVNNFVKSATYCECVLNGKIIDNPTAVMQALVTAFNADGASPVTAAVTNGMVTLTAK
                     VAGTVLTVTTSDDGAQPGGLGGINFLALPIVPAQDTAELSIIGSIGPNLPNGSPGTFT
                     ITVNGFSKSATYCECLLNGQVIDNPRALEQALVDALNADATSPVTASLGSNGVELTAK
                     TLGTVVTVTANDNNAGVGGLSGIGFLGVNGSLPSGSGPIPGFVNPKYIVVGVTYAPPG
                     PQSRVDYTNSVMLGTSTSIQNSFKRNITASVKISKSIAIPGLETTNGKVVDTVSVSNS
                     FTNGSTDGKSVTVNKTTTQSQTTPGPSDAFIGLDHDFDLVWVWLNPVVSLGVNDPNNP
                     STVTWNGVGFDPADAPDLEVIPIPVGVLNGDLPLQADLAARLARAWAAGQAFPAGTGP
                     GLTGPGTGTDFDAIVRFDPFWDCTPHPANCPTTIDAVRFTKSDSSNLIYQQADPGQQP
                     GPNGFGLNYTNTSVVSHGDSTEVSHTISIERAFSGGAFIGGLDLTLNDTTSFTQGTDT
                     KTDLTTTQSGNVTATIVGPTCTVPAGENFCQPQYTGPVNFLVYMDNKFGSFMFFPTTD
                     PRFVLAATPANAAIPVGGTATYTITSTAIDGFTGNVALTLIGLPTGQGMTATFSPATI
                     PAAGGTSTLTVTTTSATPAASTNLAITGTSGTLVEHVPVVLQVQDFTVQVTPGSQTVA
                     AGASTSFQVTITAVDGTNLTGAALSVTGLPANASASFSPPTANGAGGVNSTMTITTTA
                     SVIGGNYPLTVCGNVIGLSHCAVPVTLTVTAPDFSISATPTSQTVLPGGATTYTINTS
                     ALNGFAGNITLTLTGLPSNATATFSPSVLAAGSSSTLTVTTSTTTPGGSFQLSATGTA
                     GAIVHSTPIILVVNAAQDFSISITPQSAGISVGGSATYTVSISGINGFTGNVTLSASG
                     LPATITPSFSVNPIAAGGSSTLTLSTSTSTVPGNYSFTVTGVNGTLQHSVPATLTVNA
                     PPDFSVSITPSSQTVVQGSCVSYTITNTALNGFAGVASITITGLPTGATATASPTTIT
                     GSGSSTITICTSSTTPAGSYSLTVTEVSGSISHSQPFTLVVNVPAGFALNSNTSSQTV
                     MAGSSTNYTVSTTVVGGFSGNVGLTITGLPAGSTASFAPSTIAGAGSSVLTVNTTGSV
                     TPGSYTLNLSGTSGTLQSNTNVTLVAVMPQTAVLSPTSVSFASQMVGTRSTAQTITLT
                     NTGGAALSISGINVTGDFSQTTTCGTSLAAGASCSIQVTFAPTATGSRTGTISVTDNA
                     AGSPHSASLSGTGVAPAVTLSTASLTFGSTTVGTSSAAQSVTLTNTGSAALSISGISA
                     TGDFSQTNTCGTSVAVNASCSISVVFSPTLSGTRTGSLTISDNASGGSQSVALTGTAV
                     NPPPPPPPGGGGCTGRLCQNQ"
     gene            complement(13265..13729)
                     /locus_tag="VE783_08545"
     CDS             complement(13265..13729)
                     /locus_tag="VE783_08545"
                     /inference="COORDINATES: protein motif:HMM:NF024242.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HYX53488.1"
                     /translation="MGQRPLLTGGMELFSQREVQTREPDYRVSALLKFLSAEDRISTS
                     NVESIAFTLNVSKSYLRFLFKNETGIPLSRYLKHLKLQRAHEMLCASLLSVKEVMAHV
                     GVDDHSHFARDYKRQFGESPSETRLRSAQAKTIAALSRHKIINSATNKALSS"
     gene            complement(14051..14935)
                     /locus_tag="VE783_08550"
     CDS             complement(14051..14935)
                     /locus_tag="VE783_08550"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53489.1"
                     /translation="MAATQANVYMDERSRRTATHGFIEPAGRLVGESLLYNTREVVIQ
                     VIFFSLMMLAIEFGFRLGRKLQDRTSDKIKPQISAIEGSLLAVLGLLLGFTMSMSVSR
                     YEQRKQLGLEEANALGTACLRTQLVPDPQGKEILGLLQQYIKVRVDYGSTAGNDLPRI
                     NELRRQGAQLQSQFWGKTAAYAHQDPNPVKAGLLLQALNQAIDLEASRWMSRNDHVPG
                     SVIYVIAVVAILSALLVGFAFGVYGRRQLLSMCALSLAITIVLAVIVDLDRPRSGFIR
                     VTQQPMIDLMQQQQQQQP"
     gene            complement(15463..15837)
                     /locus_tag="VE783_08555"
     CDS             complement(15463..15837)
                     /locus_tag="VE783_08555"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53490.1"
                     /translation="MTEHFIEQANSAYNKQVSDQVQRITGELARLETLLSAGMVDRRV
                     LYEFRMAVDRVRQTGWQVQRWLDGDEDALAVMLTQQRIRSATKMARLLAAEPVLAEEH
                     SGELVELRQAIDKLQMVLPPAN"
     gene            complement(16056..16898)
                     /locus_tag="VE783_08560"
     CDS             complement(16056..16898)
                     /locus_tag="VE783_08560"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53491.1"
                     /translation="MAQGTARAAEKVDKMERLRRIGAREGVIQIVPTRGSVRPVHLHE
                     DESDLVTRPLASPTGPGGAAGFRNRHHSQIAVPEVHNIYMGPFWGDKAFVEQFSSDIV
                     QRGYLQPLKDLGYGTGPGKYVGPIDGPTLPKGKPFHDKAAQQVLGQMIDAGTLKPNAN
                     SLYVLILPDKVPSIMDSDGSKSCKDFCGYHDAFLHKGLEVAYAVLPSSKCKGCGGQME
                     DFTAVYAHELAEAATDKVPGQGWVANDGSENGDLEAWILLNWGPYVVQGYYTNERGNT
                     VGPF"
     gene            complement(17768..17844)
                     /locus_tag="VE783_08565"
     tRNA            complement(17768..17844)
                     /locus_tag="VE783_08565"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(17808..17810),aa:Val,seq:tac)
     gene            18065..20098
                     /locus_tag="VE783_08570"
     CDS             18065..20098
                     /locus_tag="VE783_08570"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HYX53492.1"
                     /translation="MLVTLLDKLPTILVLAVLVGIFVALRRHARSVRLNLWVAAWGLI
                     FCHFLSGIFYPADGSGSPLVLLADQGALQLAAFFFIASLTAFHEDRRLTRAFLVTASV
                     PAVLYIALLAFGYEPRGSYIAGLALLFFGVPLLIARARKPIWQGLVWAPVVIGVGAWA
                     IVEAWSGNYVFGWIALLTVTFALPALLYWRRYPRWSPGVITTVGGFGLWSSVFPVGVL
                     VGTYVPNLKINPELWNVPKFFVAFGMILTLLEEKSSVLRAAGVRERKINDQMRRFAEI
                     TSRMLTGADFSALAQEIAQAICDTTTFRRVCIVLSADGRTLYPAGCAGMDEEAMAQVA
                     ENCRNWWQLEHVVEIFRRGARIGETSCIVPAEALTEYKLSVSKLDPPAGWSKGTRVFI
                     PLQTLRGSYIGCIALDDPCDMDRVNAEEMSRIELLAGDLAVILDNEALHRQLVRSEKL
                     AAMGQLVAGVAHELNNPLTSIVGYSELMTDEVAPGPARQKLEKMIREAQRMKRIIENL
                     LRFARQNNLEKKSANLQDLLQDVLALREYHIQNHDIELRLHLEPDLPLVALDEDQFKQ
                     ILLNLLNNSMDALEACEHKAISITAKRRGDRVVLHFDDNGPGFSDPNRVFDPFYTTKP
                     VGKGTGLGLSICYGIVKEHGGDVHAVNLSPGARIALELPMQAMVGFDEPQLVS"
     gene            20348..>20695
                     /locus_tag="VE783_08575"
     CDS             20348..>20695
                     /locus_tag="VE783_08575"
                     /inference="COORDINATES: protein motif:HMM:NF024895.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane beta-barrel protein"
                     /protein_id="HYX53493.1"
                     /translation="MKKISSMLLAAVCLFAVSAFAQDFKSEVNVQGTANFTASTNDLF
                     SSRPATTSGGFLAGYRYHLLPWFAVEGDYSWTRNTQNFLDPLNLGGLQTNVHALTGEA
                     VITASSRHRVRPYG"
BASE COUNT         4206 a         6077 c         5802 g         4610 t
ORIGIN      
        1 cacgacctac acggcttcgg ggaacaaagg gaacgcactt ccgccggctg ggtcttccag
       61 cagcctttgt ctaagctgcc acgatggaac cattgcgccg ggtacgaccg tggcttacgg
      121 cactttctcg accagtgcga agatgcagga cgtgtttgga agcaatatgc aaagcacgca
      181 tcccttcagc atgctgctgc cgttgcgcga cgcgccgcac ctggtttcga cgctgaccac
      241 gaccgggcaa accgctgatg tcacgggggc tgtgaaactg atcagcggaa acgtggaatg
      301 cacgtcctgc cataacccgc atcagcagag cattgacaga acggtaccgg cgttcctggt
      361 tcgtgactcc tcgggagggc agctgtgcct gagctgtcat gatcccaatc ggatcacctc
      421 aaaccagacc aatcctcttg cgcagtggcc gaccagcatc catgccacgg cgccgaacgc
      481 aactacgaat caaccttcgg tgggcggcta taacacggtt gcccagaatg catgttcggc
      541 gtgccatgct gaacataacg gctccgggct tacggagcta ctgcgcggcg cgaatgagca
      601 ggactgtata agctgccaca acggcggcac taacgtgacc ccggccgcgc ccaatgtatt
      661 tgccgaattt tcaaaggcgg gcgcgctgcc aggaacggct catccttttc cgagcgggac
      721 gaatacgcac gatgcatctg aaccggcgct gctgaaccag aaccggcacg cgacctgcgc
      781 cgattgccac aatccgcacg cctcgcggca ggtagccacg ttccctgttc ccccggcgat
      841 ccgcgcgtcg cagaacctgg tgagcggaat caacgcgaca gacggaatca ccgtgcttaa
      901 tccggcagtc aatcagtacg agaactgcct gcgctgccac ggaaccagca cgggaaaggt
      961 cgccagcatc agctatggct atcagcctac tcgcatgagc gtgggtggag acccgctgaa
     1021 tgtctcgctg cagttgaact cgggcacgta tccgccatcg tcgcatccgg tgatgcacac
     1081 gcgcaacagc ccgtactcgc agcccagcct tttgacgaac atgctgaaga ttgatggcgt
     1141 cagcctgggg cgagccatgg gcacgcagat cctttgcact gactgccaca acagtgatga
     1201 caatcgggag tttggtggtg ttggttccaa tggcccccac ggttcggcct tttcccacat
     1261 cctggaacgc cggtatgaat tcagccaggc gcctgcgccc ggacagcagg taacaaacct
     1321 gtttccctcg ccggacttga gcgccaaagg gccgtatggt ctttgtgcaa agtgccacaa
     1381 catgaccaac attgtgagtg acgccagttt caatcagcac tcgcggcata tcaatcgcgg
     1441 tttctcgtgc tcggcttgtc acgcggcgca cggcaccggc ggacagtcca gttgggaacg
     1501 gctggtcagt tttgatctga acgtggttgc cccgtcagtt cagggacaaa cgcctcttcc
     1561 gatcacctac agcaaagcga cgaactcctg caccctaacc tgccacaacc acaagcactg
     1621 aactcaagtg gtgagtctcg tcacagcgtt tcggtggcag caggagcgaa actgctgggt
     1681 tgtgcgcaca gcgatcacgc taggatcaag cgagcgatcg cagggttccc aattcataag
     1741 gtttgaggag tcatactgtg aaaagaatcg caatcatgat catcggcggg ctgctgattg
     1801 ccgtgctggc cattgcattt gccgggggca aaacagcgcc agcggcggcc ctgggcccgg
     1861 taaaacttac aactccgagc gccagcgcac gttttctggc cagcatacaa gcccacttca
     1921 gcaccggtaa aggtgagtta cagcgtgctt ttggcgtcaa gcagcaggcc aggagctacc
     1981 ggatgaagac cataacgcaa ttgcgtcgcg gagagccgat ggagacgatc gtggaagtgg
     2041 tttgtcccga tcgcgagcgc tttatcacaa cggcgtcggg caaagagttc catgccgtgc
     2101 gcattggctc gacgggatac ctggaacgag aagacggaac gtggaacgtg gtaacgaccc
     2161 ctccgagtgg ctgggcgcct tgcggccccg atccaggtga gcctgcgccc tgggcggtgg
     2221 tgaatgaagg ccgcgatcca acggctgtcc tggcgaagct cgagggcgct gacattagcc
     2281 gtggcgttct ggtcagcact ccagccggag aatgccagca atggatcatc aagctgcaga
     2341 tgcccggggc tgttgcgcac gcccacgggt caaagggatt ggagtacacg ttgtgcgtcg
     2401 acccgaagca gcacctgccg atggcagtcg ccatgggtgg gacgattgtg accagctact
     2461 acgattggaa caagcccatc cagatcgatc ctcccaagat gtaaggtccc cgacttcagt
     2521 acgactaagg cggcagggaa ctgccgcctt ccgttatcct ggccgcacat gtctgccgtt
     2581 gcaaaagccc ttcctgaaca tctcacgaat agcttcacgg ccgttcaccg gactctccgc
     2641 cacctgatga ttgattgcgt cgtcttcata gaccacgcca gagcgtctgc atcagcacga
     2701 tggaacgcct cttcccactg ttggtccagc tctttcggct gcatcatgtc tccagatgta
     2761 cgcctgattg ctatttggtg atttctgatt tagttttccg ctacatactt caaagcccaa
     2821 ggggtcttca tgttctgctc gaattgcggt gccgccaacg cggaaggcgc aaagcactgt
     2881 tccaactgcg gacgcgcaat acaaattcag cccatcgcga ctcagtctgt cgtcgcgacc
     2941 agcggtgccg ccgcagcgcc tgcacctgcg ccttcatcgc aacgaccgcc gtcgccgtat
     3001 tcgccctggc tagacgtacc tccaatgtct gcgcccaatg cgggatcgcc ataccaaccg
     3061 ctgccctacg ctcccactga cggcaaagca acagcaagtc tggttctcgg catcctttct
     3121 ctgcttggct tcagcattgt cgcgggtctg cctgcggtga ttcttggcca catctcgcgc
     3181 agcaatatca gttccagcgg cggacgcctg aagggcaaag gcgtggcgct tggcggactg
     3241 attaccggct acattggaat cagtatcgtt ccaattctga tcatcgcggc gattgcgatt
     3301 cccaatctcc tcaaatcccg acagtccgct aacgcatctt ccgcacaggc cacaatccgg
     3361 aacgtcaaca ccgcacaggt tatctattcc accgctcatc cagagaaagg ttatgccctg
     3421 gatctggcaa cgctcggagc cgacagctcc actggcatcg atcgccagct ttcgcgcaac
     3481 tactgccagt caggaacctg gtgcatcaag agcaagtaca aatattcgct taccggcttc
     3541 tgcaacgttg atgggctctg caaagactac gtcatcgtcg caacgcctct tgacggcaac
     3601 gtggccaccc gaagcttctg ttccacctca gatgcggtaa ttcgctccaa gcgggatacc
     3661 gttctcgccg agcctctcac tacggttgac gagtgcgcca gttgggacgt gatgccataa
     3721 gctactgtgg ctgcgttttg ctctgttgtg cggttacgtg ctccacaatt tcctgaaaac
     3781 cgggatcgcc gcgaatggag tcgaacgatt tatctttcag tgactcgggg cggctcagcc
     3841 ccgcagctac tgcgcgccgc agttcttcca tggcgggttt cttttcattc atggccgcat
     3901 gtgcccttgc cagcagcaaa tgcggtgccg gcagttcggg gttcaggatg gcggacgcgc
     3961 tgaacaggtc cttggccgtc gtgtagtcct tcttttgcat gtcagtttgc ccggattcaa
     4021 ttgccagggc aaagctgccg gctatcgcgc gcgccacggc gtcacgctgc tcagggtcgc
     4081 ggctgctttc ctggcgtctc cgggcatcgg agaccagcgt ctcaagctgt tcaaacagca
     4141 ggcccgacgc tgccgcgcgt tccatgaggc cttgaatggt gtagttgaac ttgttcgcgg
     4201 tcttctcctc cagatcgagt gaggcgttca ggtttttgcg ggccttgcgt agctcgtcac
     4261 tgtgggcaag ctcctgcgcg gccttttccg cccccgttgt ctcacgcagc tttttgaaat
     4321 cctccgcgat ctgcaaatag tcgcgctgcg cttccagtgc gcggccgcta tcgcgcgcgt
     4381 acgctgcttc tttcatccgg cgggcatatt cagcttccac aaactgttgg tcctgaagca
     4441 gcgtgccacg tgacatggcg cgcagttgca tccacgccaa cgcctcttca gcaagcgccg
     4501 gaggaagcca ggagtgcggg ccggcaaaaa tcgccagccg cgccgcaaca tgctttgagc
     4561 tcaattcttc gtagagcttt gaaacttcct ggtagttgaa gtcctcggtt cccgtagtca
     4621 aaaaccagtc gcccatatca ggagtgggaa gggaaccgcc cttgggcaat ccggctccgc
     4681 aggcaatcag gccggcaaca cagcctttgc agttcatggc aatgctcgat gctactcgcg
     4741 ctccaccgga aaaacctgtg agatagaccc ggcgcttgtc gattgcatag cgctggagca
     4801 ggtcggcgga aaagaggcgt atggcctcgg tcggatccgc gaaattccgc gaattattgc
     4861 tcccggcaac aatgaaccca aacttctccg cagcttgctg gaatgctttt accggctcag
     4921 caccgttgcc gcccggatcg aacgccatca gaaccggcca cttctttccc ggcgtgtact
     4981 gcgacggcag atacagcgca tacgaatgcg aggcattggc gagcgttgca accgaaggat
     5041 gaagcacccc agtttgagga gtctgaggtg gcggaacctg tgcggccagc aagcgcggaa
     5101 taagcgcgat gagtatgtat ggcaagcgta atttcaccag agctcctgag gtttccgtgc
     5161 ccccactgat tagactttgc gattccccga tttgcgtgac caccgtcggc ggttttcgtt
     5221 acaaaccgca ggtacatgcc cgctggtgat tattttctga aaaccggaca aaagtttcat
     5281 ttattcaagt acccctcttc cgggttctat attcaggttc gctgcaagcc caccctccct
     5341 cgctgtttcc aaacgcgttt ctttggaggc gtttcaatga agtccgtcgc aaatgctatc
     5401 cgcaccatct gtgctgtttt cgttatggcc gcgtacctgc tcagttttcc ggcgccggcc
     5461 catgcttatg acaacaccat tacgttcctg cgtacagacg agccaggtcg ctggtttaag
     5521 aacaccgccg gcccggttgc cggcacgcaa tcactggcgg tggccgcgcc cggagtgcag
     5581 gtccgattca aggacggcaa ctccaacgct attcacaccg tgaccagctt gattttcccc
     5641 acaggcgctg caggaatgcc gtttgatacc ggcagcctcc agaccaatca gcaggcgcga
     5701 ctcacgctga ctacgcctgg cctgtacgtt tttacgtgta agatccatcc ttatatgttc
     5761 gcggcggtga tcgtcgatga tcccaacacc gcgggcctcg acctgggcga gagcatcacg
     5821 ctggtgaatg gaatcaccgt gcccaccagc agcgatcttg ctacccgcct gctgcggacc
     5881 ttcttcatcg ccaccaaccc ggccaactgg caggacttca gcaagccaac gtggcacatc
     5941 acctatcctg acgtaaacgt gcgcatcacc ggtggggcag tggtcaatct gcctgcggtg
     6001 ctgaacgcgc gttacggaaa cgacatcacg cttccgccgc tcttcaatcc ggccaccgcc
     6061 ggcgtcggcg aagtatgggt agatactcag ttcgaactca ccaggcaaaa agacaagccc
     6121 ggcacggcca ccagcgtcga cgccaactcc tggaagccga cgcgcaaggt cgccctgccg
     6181 caggttgaca tgaacaaccc gcataacatg tggaccgacc agaaccagac cgtcatctac
     6241 cagacgcaat ggttcgactt ccgcatgagc accttcaatc gcaccaccgg gcgtttggtt
     6301 aacgacgtca ccgttggtcc cgatccctcg cacgtcatga cccgtacgga tactgaccat
     6361 ttgcacgtcg cactcgatgg cgaagacagc ccgttcgccg tagttcagct caccccgctg
     6421 cgcccgcaga tcgagcgcag catcaacatt gccgaaggcc atccgcatgc gcactggatg
     6481 ggccatgacg gccagagcat ggtcactccc aacaccttca ctgcggattc caccatttac
     6541 gacttcgcca ccgacagcgt gcgcgccatt gcccacgtcg gcaatttgcc catcgccacc
     6601 ggcatgatgc ccgacgacag caaatattat gtcgacaatt tcctggacag caccatgagc
     6661 gtgattgaca ccaaaactgg cgcggtcctc aaaaccatca acctgctcgc caactatgac
     6721 ccgatctccg gcgccatctc cggtccggtg ggcgcgctgc ccattcaaac tccggtcagc
     6781 cccgatggtc gcgtcatggt cacagctaac attctgacgg acacgatcac gctcattgat
     6841 accaaaactg acaccctcgt cgccatgctg ccttgcgatg gcggctgcca cggcgtgcaa
     6901 tggggagcca agaagggcgg cggctattac gcctacgtga gcacccagtt ttccaacgtg
     6961 cttgacgtag tcgatcccaa cccggacggc agcggcgact taacgcatgc cgcggttgtc
     7021 ggccgcgttc ttctcaagac cctgcccacg accgccactg acgaccagat catcggcaac
     7081 gacggcatgg gtggccaggg tgtgcttccg attccgcttg tctacaacgg ctgggtgcag
     7141 aacctgcctg ccccgtttaa gcagcagttg actcctgccc agcagaaccc gatcggcaag
     7201 taatcgccgc tcgtctaaaa agaagtccca cgcgcagctc acgcagtcag ccggcctgat
     7261 ccttgggccg gctgtttctt gcccgctccg ttctgcgatg attggctagc tcgactctca
     7321 cgggtttact actctgtaaa tgccatgcac tgcccggggg taccctggca cccaccccga
     7381 aaacaaagca cttacgtcga gtcacgccgg ggtgctctcc ggaattttcg gtgagctact
     7441 caaggcgctc atgcatgatc cggcctgcgc cgggtttacc actcagccaa cagctcagac
     7501 ccggctcgtt gccaattcct atttagtact cgttgatgtc aaagatctgc gccaccctcg
     7561 gcggcagttc gccgaggaaa tcaggccaga ttacaacgga ttctttgtcc gaagcaatgg
     7621 cgaagaagta cagccgagtc tctggaaaaa ggccagtagc aaccggccaa tgcaggacac
     7681 ctgacagcag agaatcgaaa agatccggcg tcgcgaacac aacgaatgac ttcgcgccac
     7741 caccaatggc cagccgtatc gtcgtcggcc taaaacacac ctttatagat atttccgcgg
     7801 ctgtccttgg ccacgccttt tcccggccgt gggtgttctc cgccttcgct ttcgttgaag
     7861 aattccaccg tcagcgttgt tcccctgtct cctttgattg aggcgcgcga gtggctatac
     7921 gtccccagca cgtgcgcaat gaaatatcct tgaccgtata cagcgtccca gacctccgcc
     7981 atctcgctct taggcgcgtt cccgcttgca ctgctggccg catcagcttt atccagacga
     8041 cgcactgatt cccaggatcc tttgaaatgt tcgccgtcat tcagggttac tgaaatatct
     8101 cccgtcgccg tgatcttcgc ctcaaaagag ggcagtgggc tttgctcggc cagcgctcct
     8161 ttcactggat agagccgcat attcgcatag catccacaca gcatcatcgt gctcaacaat
     8221 gccagaatga acttagtctt catggttcct ccagatttca gccacttacc tgattgcact
     8281 ctaagtctcc cgcgccgaaa cggatgaaca agagttgtaa ggattcgtga aggcatagat
     8341 taacctgacc gagagctatg cgcagcgttg ggtggcacaa aaaagaggcg cttcgttgtg
     8401 aagcgccccc cgaggtttaa ttcaattgat ttactggttt tggcaaagcc tccccgtgca
     8461 gccgcctcct cccggcggcg gaggtggcgg tggattcacg gcagtccctg tcagggcaac
     8521 tgactgtgaa cctccgctgg cgttgtcact gattgtcagg ctgcctgtcc gtgtgccact
     8581 aagggtcggt gagaagacaa cgctgatgga gcagctggca ttcaccgcca cgcttgtacc
     8641 gcacgtgttg gtctggctga agtcccccgt cgcgctgatg ccgctgatgg agagagccgc
     8701 ggatccggta tttgtcagcg tcacgctctg ggcagcactg ctcgttccca ctgttgtgga
     8761 cccgaacgtc agactcgcgg tggagagtgt caccgcaggc gccacgcccg ttcctgacag
     8821 gctggcgcta tgcggactgc cggctgcatt atcggtcacg ctgatcgttc ccgtccgtga
     8881 gccggttgcc gtcggtgcga aagtcacttg tatcgagcag ctcgcgcccg ccgccagtga
     8941 cgttccgcag gttgtggttt ggctgaagtc gccggtgacg ttaatgccgc tgattgagag
     9001 cgcagcgccg cccgtattgg tgagcgtaat cgtctgggcc gtgctccggg ttccgaccat
     9061 ctggctggca aagctcacgg acgttggcga tagcactgcc gtctgtggca tcaccgccac
     9121 cagggtcaca tttgtgttgg actgcagcgt gccgctggtc ccggaaagat tgagagtgta
     9181 actgcccgga gtgaccgaac cagttgtgtt cacggtcagc actgaactgc ctgctccggc
     9241 aatggtgctt ggggcaaagc tggccgtaga cccggccggc agcccggtta tggtaagtcc
     9301 cacgttcccg ctgaagccac ctacaacggt cgttgacacc gtgtagttgg tgctggaacc
     9361 ggccatcacg gtttgagaac tcgtattcga attcaacgcg aagcccgcag gaacgttcac
     9421 caccagcgta aacggctggc tgtgacttat tgatccgctc acttcggtaa cggtcaagga
     9481 gtaactcccc gccggcgttg tactcgaagt acagatcgtt atggtggagc tgccgcttcc
     9541 cgtaatcgtc gttggggagg ccgttgcggt tgcgcccgtc ggcaaaccgg taatcgtgat
     9601 gcttgcgacg ccggcgaaac cgttcagggc ggtattggtg atcgtgtaac tcacgcagct
     9661 tccctggacg accgtctgcg acgagggcgt gattgagacg ctgaaatccg gcggcgcatt
     9721 caccgtgagc gttgccggta cgctgtgctg cagcgttccg ttcacgcccg tgacagtgaa
     9781 ggaataattt cccggcaccg tggaagttga ggttgaaagc gtgagcgttg atgatccgcc
     9841 cgcggcaatc ggattcacac tgaaactcgg ggtgatcgta gccggcagtc cgcttgcgct
     9901 cagggtcacg ttgccggtga atccgttgat tccggagatt gaaactgtat acgtcgcgct
     9961 gcctcccacg ctgatccctg ctgattgtgg cgtaatcgag atcgagaagt cctgcgcagc
    10021 attgaccacc agaatgatcg gcgtgctatg gacgatcgcg cctgcagtcc cggttgcact
    10081 caactgaaac gatccgcccg gggttgtggt agaggtggtg accgttagag ttgaagagct
    10141 ccccgccgcc aacacgcttg ggctgaacgt tgccgtagca ttactcggca aaccggtcag
    10201 tgtcagcgta atgttccccg caaacccgtt aagcgcactt gtgttgatgg tgtaggtcgt
    10261 cgcaccgcca ggcagaaccg tctgtgaagt cggtgtcgcc gagatgctga aatccggcgc
    10321 ggttacggtc agggtcaccg gaactgcgca atgtgacagc ccgataacgt tcccacatac
    10381 cgtaagtgga tagttgcctc cgatcactga cgcggtcgtc gtgatcgtca tggttgaatt
    10441 tactcctcca gctccgttgg cggtgggtgg actgaagctg gcggaagcgt tcgccggaag
    10501 tccggtcacg ctcagtgccg ctcctgtcag gttcgtgcca tccactgccg ttatcgtcac
    10561 ttggaatgaa gtactggctc ctgctgccac agtctgggat cccggcgtta cctgcaccgt
    10621 gaaatcctgt acttgcagga ccactggaac atgctccacg agcgtcccgc tggtgcccgt
    10681 aatagccagg ttagtactgg cggccggtgt ggcgctggta gtcgtaacgg tcaacgtcga
    10741 agttccgccg gccgccggaa ttgttgccgg gctgaatgtc gcagtcatgc cctggccggt
    10801 aggcaaacca atcagcgtga gagcgacatt tccggtaaag ccgtcgattg ctgtgctggt
    10861 aatcgtgtag gttgccgtgc ctccaaccgg aatcgctgca ttcgcgggag tggctgcgag
    10921 cacgaagcga ggatctgtgg tcgggaagaa cataaagctc ccgaacttgt tgtccatata
    10981 aaccaggaaa tttactggac ccgtatattg cggttggcag aaattctcgc cggccggaac
    11041 cgtacaagta gggccgacga tcgtagcagt cacatttccg ctctgcgtgg tcgtgaggtc
    11101 cgtcttcgtg tctgtcccct gtgtgaatga agtcgtatcg ttcaacgtga gatccagccc
    11161 accaatgaac gccccacccg aaaaagcccg ttcgattgag attgtgtgag agacttccgt
    11221 ggagtctccg tggctcacaa ccgaggtgtt cgtgtaatta agcccgaatc catttgggcc
    11281 tggttgctgc ccaggatcag cctgctgata aatgaggttc gagctatccg attttgtaaa
    11341 tcgcactgcg tcaatggttg tagggcaatt ggccggatgt ggcgtgcagt cccagaacgg
    11401 atcaaatcgc acaatagcat cgaagtccgt tccagtgcca ggtccggtaa gtccggggcc
    11461 tgtaccggcc ggaaacgcct gccctgctgc ccaggccctc gcgagtcgcg ccgcaaggtc
    11521 cgcttgcaaa ggcagatcgc cgtttaaaac gcccacagga atgggtatga cttccaggtc
    11581 tggagcatca gcaggatcga accctacacc gttccatgtc acggtcgagg ggttgtttgg
    11641 atcattgacg cctaatgaaa ctaccgggtt aagccacacc caaaccagat cgaaatcatg
    11701 atccagcccg ataaacgcat cgctggggcc aggcgtagtc tgtgactgcg tcgttgtttt
    11761 gtttacggtc acgcttttcc cgtctgtgga gccattagtg aaggagtttg atacggatac
    11821 cgtatccacc accttcccgt ttgtggtctc tagtccggga atagctattg acttcgaaat
    11881 ctttacactc gctgtgatat tcctcttgaa cgagttctgg attgacgtgg aggtgcccag
    11941 catcacgctg ttggtgtaat ccactctgct ttgagggccg ggaggagcgt acgtcacgcc
    12001 tacaacgatg tatttcggat taacaaatcc cgggattggc cctgaaccac ttggcaggct
    12061 gccgttgact cctaaaaatc caatgccact caggccgcct actcctgcat tgttgtcgtt
    12121 ggcggtgact gtaaccacgg tgccaagtgt cttggccgtg agttctaccc cattgctgcc
    12181 tagcgaagct gtgactgggg aggtggcatc cgcgtttagc gcatccacca gtgcctgctc
    12241 cagcgcgcgt ggattgtcaa tcacctgacc attgaggagg cactcgcaat aggtggcgga
    12301 cttgctgaac ccgttcaccg tgatggtgaa agttcccggg ctgccgtttg gcaggttggg
    12361 cccgatgctg ccgatgatgc tcaattccgc cgtatcctgg gcaggcacaa tcggcagtgc
    12421 caggaagttg atgcccccca gaccgccggg ttgcgcgccg tcgtcggaag ttgtcaccgt
    12481 aagcacagtg cctgccacct tggcggtcag cgttaccatt ccgttcgtga ctgcggctgt
    12541 gaccggagaa gctccgtctg cattaaaggc ggtcaccagt gcctgcatca ccgctgttgg
    12601 gttgtcaata atcttcccat tcaacacgca ctcgcaatag gttgccgact tcacgaaatt
    12661 gttcacatta acggaaaagg tggaactgca tccattgcag gtgttcgcgt taatgcttcc
    12721 caccaccgtg aagctggact tgtcttggat gggcacgatc ggaatcccga gaaatccgat
    12781 gccgctgaga cctcccagcc ctgccccatt gtccacgctc gaaattgtca agaaggtgcc
    12841 ggacaccttt ggcgtcagcg taattcctgc acgtgtcagg cttgcggtca cgggtgaggt
    12901 tgtgtcccca ttgaacgcat tcaccaggcc ctgcatgatc gccgttggat tgtcgatcaa
    12961 ctggccgttc agaatacatt cgcagtatgt taccgttttc gtgagggtat tcaccgtcat
    13021 tgcgaaagta gcgcttgtac ccgtgggaac attcggcccg atactaccca caatcaacag
    13081 cgactggctg cctgctgctt gcgcatgaac aggttggctg gcacaacaga gaatcattag
    13141 gatcagaacc aagaggccga ggatcctgga tagtagacgc gaggggaaca gtgtgtagtt
    13201 catggtgcct ttctgcaatc cgacctatag gtcgtcggag gcatcaaggc taacggtaca
    13261 tcggctaaga tgacaaagct ttgtttgtgg ccgaattgat tatcttgtgg cgtgatagcg
    13321 cggctatggt tttggcctgt gctgaacgca gccgcgtttc tgaagggctt tctccgaact
    13381 gtcgtttata gtcgcgagcg aagtggctgt ggtcgtctac cccaacatgg gccatcacct
    13441 ctttcactga gagaagactc gcgcacagca tttcgtgcgc tctttgcagt ttcaaatgtt
    13501 tgaggtagcg tgagagtgga atgccagttt catttttaaa tagaaatcgc aagtaactct
    13561 tggatacatt aagcgtaaat gcaatgcttt cgacgtttga tgtgcttatt cggtcttcag
    13621 ccgacaaaaa cttaagtaaa gctgaaactc tgtaatctgg ctccctggtc tgaacttcgc
    13681 gttgactgaa taactccatg ccgccggtaa gtaatggccg ttggcccatg acgcgctccc
    13741 gctgaaccca gcttgctcgt tggaaacaga ctggcaaatt gaagcagtcc gttccgtgtt
    13801 ctcttgttgg ctggccttac ggccaggcgg cgtaatggag tctatcttcc gccggagcgc
    13861 acgcttcccg gagtgggacg atagttaacc taatagtaaa caatgcgtaa aatacacact
    13921 ttaaacacac caactactgg tgccatgtaa cgtaacacta gaagcctaag gaagggcgga
    13981 taagttgtca atacaaatgg gatggctgtg tcagtccttg cgcggctcgc tcaaagacgg
    14041 cggccccagc ttagggctgc tgctgctgct gctgctgcat tagatcgatc atgggctgtt
    14101 gtgtcacgcg gataaatccc gatcgcgggc ggtccaggtc cacgatcacc gccagaacta
    14161 tagttatcgc cagcgaaaga gcgcacatgg aaagcagttg ccggcggccg tagaccccga
    14221 acgcaaagcc caccagcagg gcggagagta ttgccaccac tgcaattacg tagatcacgc
    14281 ttcccggtac gtggtcatta cggctcatcc atcgcgaggc ttccaggtcg atggcctgat
    14341 tcagcgcctg cagaagcagg cccgccttta ccggattagg gtcttgatgc gcgtacgctg
    14401 ccgttttgcc ccagaattga ctttgcagct gcgctccctg gcgacgcagt tcattgatcc
    14461 gcggcaaatc attgccggcg gtactcccat aatccacacg cacctttata tattgctgca
    14521 gcagtcccag gatctccttc ccctgtggat cgggcacaag ctgggtgcgc aggcatgccg
    14581 tccccagcgc gtttgcctct tccaggccaa gctgtttgcg ctgctcgtac cggctcacgg
    14641 acatggacat ggtgaaacct agcagcaggc ccagcactgc aagcagtgag ccttctatcg
    14701 cagaaatctg tggcttaatt ttgtctgagg tgcggtcctg cagctttctg cccagccgga
    14761 agccgaactc gatggccagc atcatcaggc tgaagaaaat tacctgaatc acgacctcgc
    14821 gcgtgttgta aagcaaactt tctcccacaa gccttcccgc cggctcaatg aagccgtgag
    14881 ttgcagtccg gcgactgcgt tcatccatat aaacgttagc ttgggttgcc gccatgaaga
    14941 ggtgattgca gtcacattgg cgctgatcac ccaatcagcg tagcgtgcga aagtccgccg
    15001 gctccgcttg gcttccgatg agtgtctgtt gaacgagggg gtgaaagctg ttttatgaga
    15061 tgacccaatg cggtgatgcc ctttgtagca caggcgcctc gcctgtgccg gttactctcc
    15121 agtgagccac agatgatgtc agggaaatcc ctgcggactc ggaacccggt tttcaccgcc
    15181 ttcgtggggc cttatcgcga caaccgactc cagttagtag cgcttgccgt tgtcatacaa
    15241 cgatgatcga ggaccagcca tttcgcatca tcttcactgt cggatcgtct ctggtatgga
    15301 atgtgatgag catgaaccgc cgtctttttg aagctgcggc aatatgcggc ggtagattgt
    15361 gattcttgcg gcacaggcga gggcgcctgc gctacacaag cgtgttaccg taattagtca
    15421 tttgtgagac aggttggtag tgatcctcgc cggatgtcga gcctaattcg cgggcggtag
    15481 caccatctgc aatttatcga tcgcctggcg cagttcaact agctcgccgc tgtgttcttc
    15541 ggccagcacc ggttcagccg ccagcagtcg agccattttg gtcgcgctgc gaatacgctg
    15601 ttgagtcagc attacggcaa gggcatcttc gtcgccatcg agccagcgct gcacctgcca
    15661 tcctgtctgg cgcacacggt ccaccgccat gcggaactca tacagcacgc gccggtcaac
    15721 catgcctgcg ctcagcagcg tttccaggcg tgccagctct ccggtgatgc gctgcacctg
    15781 gtcagaaact tgtttgttgt atgcggaatt ggcttgctca atgaaatgct cggtcacttt
    15841 ctactacctc ttgcttttct acgcacctgg aagagtgcat gactgaatgc acctagagta
    15901 gtacgactta agctagtggg gaagatgaca gaggtaacct gaagcgattt gcagattaga
    15961 gtttgcaaat acttgcagga tcgggtcgag gaatggctat tgtgaagcat ggcggagatc
    16021 aggttcctac cctgctctcc gccagattca gcgttttaga acggtcccac cgtatttcct
    16081 cgttcattgg tgtagtagcc ctggaccacg taaggccccc aattcagcag gatccacgct
    16141 tccaggtcgc cgttttccga gccgtcattg gcgacccagc cctgcccggg aaccttgtcg
    16201 gttgccgcct ccgcaagctc gtgcgcgtaa acggcggtaa agtcttccat ctggcctcca
    16261 catcccttgc acttactgga aggcagcacg gcgtacgcca cttccagccc tttatgcaaa
    16321 aacgcgtcgt ggtagccgca gaaatccttg caggacttcg aaccgtcgct atccatgatg
    16381 gacggcacct tgtctggaag gatcagcacg taaaggctgt tggcgttagg cttgagcgtg
    16441 cctgcgtcaa tcatctgtcc cagaacctgt tgcgccgctt tgtcgtgaaa cggcttgcct
    16501 ttcggcagtg ttggcccgtc aattggcccc acatacttcc ccgggccggt tccgtagccc
    16561 aggtccttca gtggctggag gtacccgcgc tggacaatgt cactgctgaa ctgctcgaca
    16621 aatgccttgt cgccccagaa aggtcccatg tagatattgt ggacttccgg tactgcaatc
    16681 tggctgtggt ggcggttgcg gaagccggct gctccgccgg ggccggtggg cgaagctagt
    16741 ggccgcgtga ccaaatcgct ttcatcttcg tgcaggtgga ctggtcttac cgagccgcgc
    16801 gtcggcacaa tctggatcac tccttcgcgc gcgccaattc tgcgcagccg ttccatcttg
    16861 tctacttttt ccgcggcacg agctgttccc tgagccataa gctattcctc cgttcgacag
    16921 cgatgattcg tcagggcccc gggcgaaata tgcggtgccc tgcttctgta gaatataaga
    16981 cgtattcccg gccattttcc ctggtagtga aaaccatttt ttgtgggcag cagagtccga
    17041 gccttgcagc cgttttgcga ttcggctttc tgcttggcat ttctcaacgc accctcggga
    17101 aacaaaggcg gcgtagatat tcccggagct ggatattgaa gcgcggctcg gcgatttgag
    17161 gtgagaacag caatctcttc aggcgctgca ttggctacga gcaggtgctg ggtgccattg
    17221 ggccctaata caagcgtgga cgaacccgcc accgttgcac ttatcgtaat gcggccgtgg
    17281 ggcagagatc cattgccggt ttgcgcaacc ccagccgcac acaagaccaa gatcgcaatg
    17341 gctaggttcg cgctgaacat cccacatcct gatttgccgc tgagcacaga gcctgaagca
    17401 ctctcgcggt gcaacgtggc tcaggctgct gcttacggaa ctttcgatac gggtggtggt
    17461 gtgcgggttt cccgggccga aaaactgacg acgcgggaca gtttggtgga accgctaaga
    17521 acgctagggc aaactgcccg ctgatccgcg aatcggaaca gggcgccagc tggtgcaacc
    17581 cactaggttc acaggttcaa atcttatttg gcggatttta cgaaactctc cgatgcccct
    17641 gccgagtccc ttgccaactt cggggctaac tcggagcaag agacacgcgt caaccggcac
    17701 ggcggtacgt tggcccactt tgcggcacgt cgccacgcta caaacccggg taagctattg
    17761 atttgcatgg tgggcggtca cggactcgaa ccgtggacct cctgcttgta aggcaggcgc
    17821 tctaaccagc tgagctaacc gcccaaggtg ggatgctctg agtatagggg cattgtagag
    17881 cccggtcaaa gctggccggc gcggagcggt agtaagcaca tccgcgcatt ccgccgccgt
    17941 taagcagatt gcctgatact gctcttccag ccaccgtgtt accaaggtca ctgtaccagc
    18001 agattcttcg gctgcctccc ccgaaatgcc tgtgttagat tcgcgtcagc ttccggggaa
    18061 agtgatgtta gttaccttgc tcgacaagct cccgactatc cttgtactcg ccgtactggt
    18121 gggcattttc gttgctttgc gacggcatgc gcgctcggtg cgcctgaatc tgtgggtggc
    18181 ggcatggggg ctgatcttct gccatttcct atccggcatc ttctacccgg ctgatgggtc
    18241 gggatcgccg cttgtgctcc ttgccgatca gggagccctt cagcttgctg cgttcttttt
    18301 tattgcttca ctcactgcat ttcacgaaga ccgccggtta acacgcgctt ttttggtgac
    18361 agccagcgtc cctgccgtgc tctatatcgc cctgctggct tttggctatg aaccgcgtgg
    18421 ttcttatatt gccgggctgg cgctgctgtt ttttggcgtg ccattgctca tcgcgcgtgc
    18481 ccgtaagcca atctggcaag ggctggtctg ggctccggtt gtgattggcg tcggcgcatg
    18541 ggcgattgtg gaggcgtgga gcggcaatta cgtctttggc tggatagcgt tgctgaccgt
    18601 gacctttgcg ctgcccgcgc ttctttactg gcgccgctac ccgcgttggt cgcccggagt
    18661 gatcaccacc gtgggcggct tcgggttgtg gtcatcggtt tttcccgttg gcgtgctcgt
    18721 gggcacatat gttccgaacc tgaaaatcaa ccctgagctg tggaacgtgc ccaagttctt
    18781 cgttgctttc ggcatgatcc tcacgctgct ggaagagaag tcgagcgtat tgcgggcagc
    18841 gggcgtgcgc gagcgcaaga tcaacgacca gatgcgccgt tttgccgaaa ttacatcgcg
    18901 catgctcacc ggggcagatt tcagcgccct ggcgcaggag attgcccagg ctatttgcga
    18961 taccactact tttcgtcgcg tgtgcatcgt gttgagcgct gacggcagga cactttatcc
    19021 cgcgggctgc gccggcatgg acgaggaagc gatggcgcag gtcgccgaga attgccggaa
    19081 ttggtggcag cttgaacacg tggttgaaat ctttcggcgc ggtgcgcgca taggagaaac
    19141 ctcctgcatt gttcccgcag aagccctcac cgagtacaag ttgtctgtga gcaagcttga
    19201 ccctccggcg ggatggagca agggaactcg cgtctttatt ccattgcaga ccttgcgcgg
    19261 ttcttacatc ggttgtattg ctctggacga tccttgtgat atggatcgtg tgaacgccga
    19321 agaaatgtca cggatcgaac tcctggccgg cgatctggca gtgatcctgg acaacgaagc
    19381 gctccatcgg cagcttgtgc gttcggaaaa acttgcagcc atgggacagc tggttgccgg
    19441 tgtggcgcac gaattgaaca accccctgac ctcaatcgtg ggatattccg aactcatgac
    19501 ggatgaggtt gcccccggcc cggcacggca gaagctcgaa aagatgatcc gcgaagcgca
    19561 acgcatgaag cgcatcatcg aaaacctgct gcgttttgcc cggcagaaca acctggaaaa
    19621 aaagtcggca aacctgcaag atttgctgca ggacgtgctg gcgcttcgcg agtatcacat
    19681 ccagaatcat gacatcgaac ttcgtcttca ccttgagccg gacctgccgc tggttgctct
    19741 ggatgaagac cagttcaagc agattctcct gaacctgctc aacaattcca tggatgcgct
    19801 ggaagcctgc gagcacaagg caatcagcat cactgcaaaa cgccgtggtg atcgcgtggt
    19861 actccatttt gacgataatg ggccagggtt cagcgacccc aatcgcgttt tcgacccctt
    19921 ctataccacc aagcctgtag gcaagggaac gggtctgggt ctgagcattt gttatggaat
    19981 tgtgaaggag cacggcggag atgtgcacgc cgtaaatctc agcccgggcg cccgcatcgc
    20041 cctggaattg cccatgcagg ccatggtggg attcgacgag ccgcagttgg tctcgtaagc
    20101 ccttctgctg ttacgcagaa ttactgattc gccttaatcc ttacgcctct gcgggtaaag
    20161 tttgatcaag ccgcgcaacg cctgctctgg cgcggggttt ttatctccaa ccctacctga
    20221 agtgtgcaga caccagccca cggcgccggg gtccccaaca aacccgctgt tggattgttg
    20281 gggtggaggc gccatctggg aactcgggta ttggggcaaa tcccatctcg gagagcagtg
    20341 gaaactcatg aaaaagattt cttcaatgct gctggcggct gtgtgcctgt ttgccgtatc
    20401 ggcctttgcg caggatttca aatcagaagt gaacgtgcag ggcacggcga acttcacagc
    20461 cagcaccaat gacctttttt cttcgcggcc tgccaccacc agcgggggat ttctcgccgg
    20521 ctatcgttat cacctgctgc cctggttcgc ggttgagggc gattactcat ggacgcgcaa
    20581 cacgcagaac tttctcgatc cgctgaatct gggcgggctg cagaccaacg tgcacgcact
    20641 caccggggaa gccgtgatca ctgcaagcag ccggcatcgc gtacggcctt acggt
//
LOCUS       DASQYP010000265        12702 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_230246, whole genome shotgun sequence.
ACCESSION   DASQYP010000265 DASQYP010000000
VERSION     DASQYP010000265.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 12702)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12702)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12702
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_230246"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1642
                     /locus_tag="VE783_08580"
     CDS             <1..1642
                     /locus_tag="VE783_08580"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HYX53494.1"
                     /translation="FKFTEHGGVRLSVIKADSGWSEEHPILSGAASVIAFEVADTGIG
                     IPSEKQRIIFEAFQQADAGTSRKYGGTGLGLAISRELASLLGGEIQLRSAPGKGSTFT
                     LYLPQTYVGPASGGMALSEARSTASFSRPMPLPTISLAEPAERIEDDRGNLQPNDNIL
                     LVVEDDPHYARVVMDLARDKGFKVLVALRGTEALALAREFRPTAVSLDVFLPDMLGWT
                     VLNHLKQDPATRHIPVQMLTMDEDWHHGLSRGAFSFVTKPTTPEGLENALARIKDYTK
                     RRRKQLLVVEDNPAEQLSIRELLGHDDIDVTVVDSGSEALDLVRKGEIDCVVLDLRLP
                     DMTGFEVLERLRDDPEKSDLPVVVFTGKELSPDEDARLHALARSVVVKDVESPERLLD
                     ETALFLHRVIGELPDSKQKMLERLHRSDEALVGRKVLVVDDDVRNIFALSSVLERRGM
                     KVLTAGTGREAITTLESTPDVAIVLMDIMMPEMDGYETMQVIRQNQAFRRLPIIALTA
                     KAMKGDREKCLEAGASEYLAKPVNTDQLLSALRMWLHR"
     gene            1753..4122
                     /locus_tag="VE783_08585"
     CDS             1753..4122
                     /locus_tag="VE783_08585"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain-containing protein"
                     /protein_id="HYX53495.1"
                     /translation="MTANDKVNILMVDDQPAKLLSYEAILGELSENLIKAGSGREALE
                     VLLKTDVAVVLMDVSMPEMDGFEMAEIIRQHPRFQKTAIIFISGVHLSDIDRLKGYER
                     GAVDYISVPVVPEVLRAKVSVFAELHRKTRMLEALNRDLEQRVTERTEELRESEIQFR
                     TLANSIPQLAWMANPDGTVFWYNQRWFDYTGTTLADVENHGWKKVHHPGHVTRVTAGI
                     ERCWRTGEEWEDTCPLRGHDGQYRWFLSRAVPIRDSHGKVVRWFGTSTDISRQIAAEE
                     QIRRLNDELRQRLTELETIMQVLPVGVVLAQDPECKVITCNAALSGMLGVPAGSNISR
                     SEPHGDQLPFEIFYEGRAMPPDHMPVQRAATTGKAVGPLELEIRLQNGRVYHMLASAS
                     PLFNEAGEVRGAVGALMDVSARKTMENTLRERADLLELASEAVMVRDSKGALHFWNSG
                     AEALYGWKRNEVLGRNVHDVLQTRYPKPIPEIDSVIREEHRWDGNLLQSTKDGREVIV
                     ASRQALKLGNDSGDGTILEINRDITAQLSAEEALRKTERLAAMGRVAGIIAHEINNPL
                     EAITNAFYLLRDHPSLDGDARAVARMAEEELLRVAHITRQTLSFYRESQQAVAVSVCK
                     VVDDVLELQARRLRLSGIELEKRYFTEGLVYGFPSELKQVFLNLVGNAIQAMPEGGRL
                     RLRVAEHKNGDPKSRGVLISVCDTGSGIKPEDAKHLFEPFFTTKSTKGTGLGLWISKG
                     IIQKYDGMIRFRSVSIGGRKATCFSVFLPGSNGIHAAAPLKVQEAIGSR"
     gene            4109..4477
                     /locus_tag="VE783_08590"
     CDS             4109..4477
                     /locus_tag="VE783_08590"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HYX53496.1"
                     /translation="MAQDNHVILCVDDEPNSLVLRKLVLERAGYKVITASSVQQAMKV
                     LESEKPDLVLSDQLMPGGTGTELAKQVKEKMPRMPVIIISGVNEIPPDATYADLFMSK
                     VEGPIAMCEKVASVLNRDSQ"
     gene            4596..4844
                     /locus_tag="VE783_08595"
     CDS             4596..4844
                     /locus_tag="VE783_08595"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53497.1"
                     /translation="MFILTLFDSLFGCWHRHLSTPRSNARPGKATHNSLRDMHVVCLD
                     CGRTFRYDWDKMRISGAYKVAERDSVTAQETEESPLFI"
     gene            4976..6133
                     /locus_tag="VE783_08600"
     CDS             4976..6133
                     /locus_tag="VE783_08600"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HYX53498.1"
                     /translation="MLAGMCTFLGVYCTQPLLPLLRNIFSASELEVSVTVSATVFGVA
                     VAAPLVGLIAERRGRKKVIVPSLFLLTIPTVLAATSHSLASLIFWRFAQGLFVPGVIA
                     VILAYINEEWAGRGVGRAMSSYVTGTVLGGFLGRFISGIIATHWHWRMTFVVLGLVNL
                     VGAVAVRSWLPKARNFVPAEHFRQALSDAKLHFHNSRLLANFATGATVLFALVGCFTY
                     ANFYLAEAPFRLNAAQLGSIFLVYLLGVVITPVSGIFLDRFGFRRTSILYCAMMCSGL
                     ALTLSSSLALVITGLAIFSSGVFVAQSAATVQTGVIAGKARSSAAGLYVTFYYLGGSL
                     GATLTGWCWQWQKWRGCVALLAGLSVFSLVMARLSSRPHEVLEPATVDALG"
     gene            complement(6141..6917)
                     /locus_tag="VE783_08605"
     CDS             complement(6141..6917)
                     /locus_tag="VE783_08605"
                     /EC_number="3.5.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF016115.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016812 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds, in cyclic amides
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyclase family protein"
                     /protein_id="HYX53499.1"
                     /translation="MANVLAELVVQLNSGALRVVDLTQPLSSQTPLLPLPPQWPNTPQ
                     FRMWEISRYDDRGPAWYWNGFETGEHTGTHFDAPIHWVSGKDLPDNSVDRIPVKKFVG
                     PACVVDVSADSQKDPDFLLTVERVKQWESQHGRIPAGAWFLLRTNWSKRSDAEQYINL
                     KQDGPHTPGFVKECSEFLAKERDVLGVGVETVGTDAGRAATFDPPFPNHYIMHGSGKF
                     GLAGLCNLDQLPPTGAVVIAAPLKIVNGSGSPLRAIAIAP"
     gene            complement(7029..10115)
                     /locus_tag="VE783_08610"
     CDS             complement(7029..10115)
                     /locus_tag="VE783_08610"
                     /inference="COORDINATES: protein motif:HMM:NF025006.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxypeptidase regulatory-like
                     domain-containing protein"
                     /protein_id="HYX53500.1"
                     /translation="MKRFLLATLAMVALCAFVSAQTITASLQGRTYDKSGAMITKAKV
                     TATNTDTGLSRSTVSGDTGDYQIAALPVGNYKVVVEAPGFQAQTRAVELTVGDTASLD
                     FTLVPGQVEQQVTVTTEAPLVETTRTSTDSVIAEQQIQNLPVNGRQFIDFALLAPGVT
                     IGDTTSGSTDVIIEPVTKLSFAGQNIHYNFIAVDGADNISTASGVQKTTPSTDAVREF
                     RVINNTYSVEAGRAVGGIVNIVTKSGTNDLHGSVYDYLRNNVFDANSPLAAPGLNKLQ
                     QNQFGVTLGGPIVKGKTFFFGNYEGQRRSENPYYNSIILNNIAAINTFKQNFGLSPET
                     LNQNRKSDYDNFIVKMDHSFTDHQYGFLRYFFNDGRLTNVSPLNDGFDLPSGFKDNNL
                     RDQSIVGSLSSTFKNNLVNEARFQYGHRTFDFPTVTTQPHLEVLNTFTAGVNRGNPDF
                     YQESRTEFVDNVTWQHGKHTLGFGGDFSHVNTLESFPLFYPFEADFGCLFAAQCPFSL
                     EAGAPQVLFFERFKAPNFTEPSFSTSVFQGQRISSAIRNQAEGEIGHNYGGLYAQDTW
                     HVSKGLNLNYGLRYQFETFPSNILNGPNKEFDPRAGFAYNIGGKYNVVLRGGFGIFHG
                     IIPMPLLACQEPSCGGTTGKFPGRNNENDLNATTRLFAFASAPNITQIALGDMLAGHY
                     VDAAPLGFCPGGTVAGCGFFGDAVIARFDKNHQAPYGVQTSLGLQFQPTNDSALDISF
                     LRSKGVHLGSFFNVNQPDPTGQVTVHNSDGTAGTKNTYFAAPGIPGSRSAGPGFPTLY
                     AVYFEAASRWNSSWNGLLVDFNKRMSHHFSTGVSYTWSKGIDDGPNPSFVLIPQDSAN
                     LKAERAISSDSVGQRFVLNTTLEGPTHMNVALNNLQFSTIVTLQSPNYFTKSAGFDAN
                     GDIFGNNDRVGIEPRNTFKGDSFQTVDLRVSRTFKATEKMSIQAMAEAFNLFNTVNVR
                     FFNTVYGAADFCNFDPTAQGCSATQKFLEGSPNPNYGTPRAVFNPRQLQFALRLSF"
     gene            10313..12478
                     /locus_tag="VE783_08615"
     CDS             10313..12478
                     /locus_tag="VE783_08615"
                     /inference="COORDINATES: protein motif:HMM:NF014794.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="indolepyruvate ferredoxin oxidoreductase subunit
                     alpha"
                     /protein_id="HYX53501.1"
                     /translation="MAERFFTKEVQSLYLGAGQEFRGEGILAVTKALLQSGVSYVAGY
                     QGAPISHLMDVLTDANHILKELGVHFEHSASEATAAATLAASVNYPLRGAVTFKSTVG
                     TNVASDALANLASSGVTGGALVIVGEDYGEGSSIMQERSHAFAMKSQMWLLDPRPNLP
                     SIVNAVEQGFALSEASNTPVMLELRIRACHVHGRFVAKDNVRPKFTLKDAMENPVRDA
                     SRVVLPPGSFLHEQEKIKKRWPAAQKFIQEHQLNEFFGDGQQDFGIILQGGMYNAVIR
                     GLELLGLSDAFGNTRIPLYVLNVTYPLIEDEVLRFCGNKRAVLVIEEGQPDFIEQNLH
                     AVLRKAGVATRVHGKDMLTMAGEYTAAVVTRGLLKFVEECAPQLINGQQLPSLARRVS
                     PPAQSNPLPILEKQVQPRPPSFCTGCPERPIFTALKLAEREIGQHHVACDIGCHLFSI
                     LPPFNIGAHTMGYGLGWASNAAFNTDETSKRTISFMGDGGFWHNGLTSGVGNAVFNQS
                     DSVLVVVDNSYTAATGGQDILSSQAENPIRTTRQPIADAVRGVGVKWVKTITRTYDVA
                     HLRDVFKEALTTKEKGPKVIVAQSECSLNQQRRVKPLMKKRMEAGERVVRERFGVDAE
                     TCTGDHSCIRLSGCPSLTIKPSPDPLRLDPVATVIDSCVGCGLCGEVAHAARLCPSFF
                     RAQIVTNPSTWDRLKTRVRETVIGFLQSRHERRLSGISA"
     gene            12487..>12702
                     /locus_tag="VE783_08620"
     CDS             12487..>12702
                     /locus_tag="VE783_08620"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53502.1"
                     /translation="METSELLDNAPPATPASQARAISIAILAMGGEGGGVLADWIVDM
                     AEHCGFLAQTTSVPGVAQCTGATIYYVE"
BASE COUNT         2623 a         3554 c         3801 g         2724 t
ORIGIN      
        1 cttcaagttc actgaacatg gcggcgtgcg gctctctgtg atcaaagcgg atagcggctg
       61 gagtgaagag catccgattc tcagcggcgc ggcttcggtt atcgccttcg aggtcgccga
      121 taccggcatt ggtatcccgt ctgagaagca gcgcatcatc ttcgaggcct ttcagcaggc
      181 cgatgcagga accagccgta aatacggcgg aaccggtctg ggcctcgcca tctcccgcga
      241 attggcgagc ctgctcggcg gtgaaatcca gctgaggtct gctcccggca agggaagtac
      301 attcacccta tacctgccgc agacctacgt tggtccggct tcaggaggaa tggcactcag
      361 cgaagcaagg tcgactgctt ccttcagccg gccgatgcca ttgccgacga tcagccttgc
      421 ggagccggct gagcggattg aagacgatcg cggcaatctg cagccgaatg acaacatact
      481 gctggtggtg gaagacgatc ctcattacgc ccgcgtggtc atggacctgg cgcgcgacaa
      541 gggcttcaaa gtgctcgtcg cgctgcgcgg cacggaagcg ctggccctgg cccgcgaatt
      601 ccgcccaacc gccgtatcgc tcgacgtgtt cctgcctgac atgctgggct ggaccgtcct
      661 gaaccacctg aaacaggacc cggccacgcg tcacatcccg gtccagatgc tcaccatgga
      721 cgaagattgg caccatggcc tttcacgcgg ggccttctca ttcgttacca agccgaccac
      781 gccggaaggc ctggagaacg cgctcgcgcg catcaaggat tacaccaagc gccgccgcaa
      841 gcagttgctg gtggttgaag acaatcccgc cgaacagctc agcatccgcg agctgctggg
      901 tcatgacgat atcgacgtga ccgtagtcga tagcggaagt gaagcgctcg acctggttcg
      961 caaaggtgag attgattgcg tagtgctcga tcttcgcctg ccggacatga caggcttcga
     1021 agtgctggag cggttgcgtg acgatccgga aaagagtgac ctgcctgtgg tggtcttcac
     1081 cggcaaggaa ctctcgccag atgaggacgc acgcctgcac gcgctagcgc gcagcgtagt
     1141 ggtgaaggat gtggagtctc ccgagcgtct gctcgatgag accgctctct tcctccaccg
     1201 tgtcatcggc gagctgccgg acagcaagca gaagatgctg gagcggctgc accgctctga
     1261 cgaagcgctg gtcggtcgca aagtgctggt tgtggacgat gacgtccgca acatcttcgc
     1321 gctctccagt gtgctggaac gccgcggcat gaaggtgctt acggccggaa ccgggcgcga
     1381 ggcaatcacc acgctcgaat caactccgga tgtggcaatc gtgctgatgg acatcatgat
     1441 gccggagatg gatggttacg aaaccatgca ggtcatccgg cagaaccagg cgttccgccg
     1501 cttgccgatc attgctctta cggcaaaagc catgaagggc gatcgcgaga aatgtctgga
     1561 agccggcgcg tcagagtatc tggcaaagcc ggtgaacact gatcagctgc tttcggcgct
     1621 gcgcatgtgg ctgcaccggt aacgagctaa ccttgagagc cggacgaggc cggacacgcg
     1681 ccgagtacgg ctgcaacagg agtatccgca atgttgagtg gtcgaagctc actagcggtg
     1741 ttgaaaaaat aaatgactgc gaatgacaaa gttaacatcc tgatggtgga tgatcagccc
     1801 gcaaagctgc tcagctatga ggcgattctg ggcgagctta gcgagaacct gatcaaagca
     1861 ggttcgggcc gtgaagcgct ggaagttctc ctgaagactg acgtggccgt tgtgctcatg
     1921 gatgtgagca tgccggagat ggacggcttc gagatggcgg agatcatccg ccagcacccc
     1981 cgcttccaga agacagccat catctttatc tccggcgtcc acctcagcga cattgaccgg
     2041 cttaaaggct atgagcgcgg cgccgtggat tacatctctg tccccgtggt tcctgaagtg
     2101 cttcgcgcca aagtcagcgt cttcgccgaa ctgcaccgca agacgcgaat gcttgaggcg
     2161 ctgaatcgcg atcttgagca gcgcgtaact gagcgcacgg aagagctgcg cgaaagcgaa
     2221 atccagtttc gtaccctggc caactccatt ccgcagctgg cctggatggc caatccggac
     2281 ggcactgtct tctggtacaa ccagcgctgg ttcgactaca ccggaaccac gctggcagat
     2341 gtggagaatc atggatggaa aaaggtccat catccggggc acgttacccg ggtaactgcc
     2401 ggtattgagc gctgctggcg caccggcgag gagtgggaag atacctgtcc cctgcgcggg
     2461 cacgatggac aatatcgctg gttcctgtcg cgcgcggtcc ccatccggga ttctcacggc
     2521 aaagtagtgc gatggttcgg caccagcaca gacataagcc gccagatagc cgcagaggaa
     2581 cagattcgca ggttgaacga tgaactcagg cagcgcctga cggaacttga aaccatcatg
     2641 caggtgctgc cggtgggtgt ggtgctggcg caggatcctg aatgcaaagt catcacctgc
     2701 aatgccgcgt tgagcggtat gctgggagtt ccggcaggct caaatatctc acgcagcgag
     2761 ccgcacggcg accagttgcc cttcgaaata ttctacgaag gcagggccat gccgcccgat
     2821 cacatgccgg tgcagcgtgc cgctactacc ggcaaggcgg ttggacctct ggagcttgaa
     2881 atccggctgc agaacggccg cgtgtatcac atgctggcca gtgcaagccc gctcttcaat
     2941 gaggccggcg aagtccgcgg cgccgtgggc gcgctcatgg atgtgagtgc ccgcaagact
     3001 atggaaaaca cgctgcgcga gcgcgccgat cttctggaac tcgcgtcaga ggcggtgatg
     3061 gtacgggatt caaaaggcgc tctgcacttt tggaactcag gcgctgaagc tctctacggc
     3121 tggaagcgca atgaagtcct gggccggaac gtgcatgacg tgctgcaaac acgctatccc
     3181 aagccgatcc cggagatcga tagtgtgata cgcgaagagc accgctggga cggcaacctg
     3241 ctccagtcaa caaaagacgg cagggaagtg attgtcgcca gccggcaagc gctgaagctg
     3301 gggaacgact ccggcgatgg cacgatcctg gaaatcaatc gcgacatcac tgcccagctt
     3361 tccgcggaag aagcgttgcg caagaccgag cgcctggccg ccatgggccg cgtcgccggc
     3421 atcatcgcgc acgaaattaa taatcctctt gaggcgatca cgaacgcctt ctacctgctg
     3481 cgcgaccatc catcgcttga tggggacgcg cgcgctgtgg ccagaatggc ggaggaagaa
     3541 cttctgcgcg tggcgcacat tacgcggcag acgctcagct tctatcgcga atcgcaacag
     3601 gccgtggcgg tttccgtgtg caaggttgtg gatgacgtgc tggagcttca ggcacggcgt
     3661 ctgcggctga gcgggatcga acttgaaaag cgctacttta ctgaaggtct ggtctacggt
     3721 tttccatcgg aattgaaaca ggtgttcctc aacctggtgg gcaatgccat ccaggcaatg
     3781 cccgaaggcg gccgcttgcg gctgcgcgtc gccgagcaca agaacggcga tcctaagtcg
     3841 cgcggtgtcc tcatttccgt gtgcgatact ggttcgggga tcaaaccgga agatgccaag
     3901 cacttgtttg aacccttctt tactactaaa tcgaccaagg gcaccggcct gggtctctgg
     3961 atcagtaagg gcattattca gaaatatgat ggcatgattc ggttccgcag cgtttccatt
     4021 ggcggacgca aagccacgtg cttctcagtg ttcctgcccg gctcgaacgg aatccatgcc
     4081 gcggcgcctt tgaaggtgca ggaagcgatt ggctcaagat aaccacgtga ttctttgtgt
     4141 cgacgacgaa cccaactcgc tcgtgctgcg caaacttgtg ctcgagcgcg ccggttacaa
     4201 ggtgattacg gcttcctctg ttcagcaggc catgaaagtc cttgaaagtg aaaagcctga
     4261 tcttgtgctc tctgatcagc ttatgccggg aggaaccgga accgaactgg ccaaacaggt
     4321 aaaagaaaaa atgcccagga tgccggtgat catcatctcc ggcgtgaatg aaattcctcc
     4381 tgacgccact tacgccgacc tttttatgag caaggtagaa ggtccgattg ccatgtgcga
     4441 aaaggtggct tccgtactca accgcgattc acaatagctt cttcttcgta actaactgaa
     4501 ttcgcgcggc ttgagggtgt gagccagcgc acatatctct gcactttagt gccgttacga
     4561 tgacgctagt cgcagtacga ctgagaaagg cggagatgtt catcttgacc cttttcgata
     4621 gcttgttcgg ctgctggcac cgtcacctca gcactcccag gagcaatgcg cgccccggca
     4681 aagccacgca caactcgctg cgtgacatgc atgtagtgtg tctcgattgc ggcaggacgt
     4741 tccgctatga ctgggataaa atgcgcatct ctggtgcgta taaggtggct gaacgcgact
     4801 ctgtcacggc gcaagaaact gaagagtcgc cgctgttcat ctgatcgctc aagctgccct
     4861 tctgcttccc acaaggcttt tccgcaggca gtattttgta tgcttgtagc aaatgccccc
     4921 gaacgcgagt tcagccgcat cttctcccat cctcgataga gctaccgtcg ctaccatgct
     4981 cgcaggcatg tgcacgttcc tgggcgtcta ttgcacgcag ccgctgctcc cgcttctcag
     5041 gaacatcttc agcgcatctg aactggaagt aagcgtcacc gtgagtgcaa cggtcttcgg
     5101 ggttgctgtt gctgcgcctc tggtggggct tatcgccgag cgcagaggcc gcaagaaagt
     5161 aattgttcct tctttatttc tgctgaccat tcccaccgtg ctcgctgcaa catcgcacag
     5221 tctggcttct ctcatctttt ggcgctttgc acaggggctg tttgttcctg gagtcatcgc
     5281 ggtgatactc gcttatatca atgaagaatg ggccggacgc ggtgttgggc gcgccatgtc
     5341 ttcttacgta accggaactg ttctgggagg atttcttgga cgcttcatct ccggcatcat
     5401 cgccactcac tggcactggc ggatgacctt cgtagtgctc ggtctggtga acctggttgg
     5461 agcggttgcg gtgcgttcat ggctgccgaa ggcgcgcaac tttgtgccgg cagagcactt
     5521 ccggcaggcg ctctcagatg caaagctgca ctttcacaac tcgcggctgc tggcgaattt
     5581 tgccaccgga gcaacagtgc tgtttgcact ggttggctgc ttcacctacg caaactttta
     5641 tctggcggaa gcgccatttc gcctgaacgc ggcgcaactc ggaagcatct tccttgttta
     5701 cctgctggga gtggtgatca cgccagtctc tgggatattt cttgaccgct ttggcttccg
     5761 ccgcacttcg atcctttatt gcgcgatgat gtgtagtggc ttggcgctta cgctttcctc
     5821 ttcgcttgcg ctggtcatca ccggcctggc gatattctct tccggtgtct tcgtcgcaca
     5881 atctgcggca acggttcaga ccggagtgat cgcaggcaag gcacggtcat cagcagccgg
     5941 actttacgtc accttctact atctgggtgg aagcctgggc gcaacgctca ccggatggtg
     6001 ctggcaatgg caaaaatggc ggggatgtgt tgctctgctc gcgggcttgt ctgtgttcag
     6061 tctcgtaatg gcacgcctga gcagccgtcc gcacgaagtg ctggaaccag caaccgttga
     6121 cgctttaggc tgatggcgat ctacggagca atagcgattg cacgcagcgg actgcctgag
     6181 ccgttcacga tctttaaggg tgcagcgatc accacggcgc ccgtcggcgg aagctggtca
     6241 agattgcata agccagccag tccgaatttg ccgcttccat gcatgatgta gtggttgggg
     6301 aacggtggat cgaaggtcgc ggcgcgaccc gcgtcagtcc ctacagtctc tacgccaacc
     6361 cccaaaacgt cgcgctcttt ggcgagaaac tccgagcact ctttcacgaa tcccggtgtg
     6421 tgtggaccgt cctgtttaag gttgatgtac tgttctgcgt cgctacgctt tgaccagtta
     6481 gtacgcagca gaaaccacgc tccagcggga attctgccgt gctgcgattc ccattgcttc
     6541 acgcgttcaa ctgtcaggag aaagtcaggg tccttctgcg agtcggcgct cacgtccacc
     6601 acgcaggccg gtcccacgaa cttcttcacc gggatacggt ccacgctgtt atcgggcagg
     6661 tctttgccgc tgacccagtg aataggcgca tcaaagtgag tgccggtgtg ttcgccggtt
     6721 tcaaagccat tccagtacca cgccgggcca cgatcgtcat aacgggaaat ttcccacatg
     6781 cggaactgcg gtgtgttcgg ccattgcgga ggaagaggca gaagaggtgt ttgcgagctc
     6841 aggggctgag tcagatcaac tacacgcagc gctccgctgt ttaactgtac aacgagttcc
     6901 gccagtacat tcgccatccg ttgttctccg tgaaggttgg ttttgccgcc gcctgctaac
     6961 tgtgcaacaa aataccgggc ggcataacat cataccgccc ggcgaggtat caggaactgg
     7021 ttagcgcgtc agaagctcaa ccgcagagcg aactggagtt ggcgcggatt aaacacggca
     7081 cgcggtgtgc cgtagttcgg gttgggtgac ccttccagga acttctgcgt cgctgagcag
     7141 ccctgggcgg tgggatcgaa attgcagaaa tccgccgcgc cgtagacggt gttgaagaac
     7201 cgcacgttta ccgtgttgaa caggttgaag gcttccgcca ttgcctgaat gctcatcttt
     7261 tccgttgcct tgaatgtccg ggaaacacgc aggtcaacgg tctggaagct gtcgccctta
     7321 aaggtatttc tcggctcaat gcccacgcga tcgttgttgc cgaagatgtc gccattcgcg
     7381 tcaaacccgg cagacttagt gaagtaattg ggagactgca gcgtgacaat tgtgctgaac
     7441 tggagattgt tgagcgccac gttcatgtgc gtggggcctt ccagcgtggt gttgagcaca
     7501 aagcgctggc ccacactgtc ggaagaaata gcgcgctccg ccttcaggtt ggcgctgtcc
     7561 tgcggaatca gcacaaagct cggattcgga ccatcgtcga tgcccttgga ccacgtatag
     7621 cttacgccgg tgctgaagtg atggctcatc cgcttgttga agtccaccag taagccattc
     7681 cacgaggaat tccagcgaga ggctgcttcg aaatagacag catagagagt cgggaagcct
     7741 gggcctgcgc tgcgcgaacc aggaattccg ggcgcggcga agtaggtgtt tttggtgcct
     7801 gctgtgccgt cactgttgtg cactgtgacc tgaccggttg gatcaggctg gttcacgttg
     7861 aaaaagcttc ccagatgcac gcccttggag cgcaggaagc tgatgtcgag cgctgaatcg
     7921 ttggtgggct ggaactggag tcccaggctg gtctggactc cgtatggcgc ttggtggttt
     7981 ttgtcgaagc gcgcgatcac cgcgtcgccg aaaaacccgc agcctgccac cgttccaccg
     8041 ggacagaaac caagaggcgc tgcgtcaaca taatggccgg ccagcatgtc acccaatgca
     8101 atctgtgtga tgttcggcgc gctggcgaaa gcaaacagtc gcgtggtcgc gtttagatca
     8161 ttttcattgt tgcggccagg aaacttgccc gtggtgccgc cgcaggaagg ctcctggcag
     8221 gccagcagag gcatggggat gatgccgtgg aagattccga agccgccgcg cagcacaacg
     8281 ttgtacttcc cgccaatgtt gtaggcgaag cctgcgcggg gatcgaactc tttattcggt
     8341 ccgttcagga tgttggaagg gaaggtctcg aactgataac gcaggccgta gttcaggttc
     8401 agccccttgc ttacatgcca cgtgtcctgc gcataaaggc cgccgtagtt gtgtccgatt
     8461 tcgccttctg cctgattgcg gatggcgctg gagatccgct gcccctggaa cacggaggtt
     8521 gagaaactcg gttcggtgaa gttcggcgcc ttgaaacgct cgaagaatag gacctgcggc
     8581 gcccctgcct caaggctgaa cggacactgc gcggcgaaga gacatccgaa atcggcttcg
     8641 aacggataga acagcgggaa tgattccagt gtgttcacgt ggctgaagtc gccgccaaag
     8701 cccagcgtgt gcttgccgtg ctgccaggta acgttgtcta caaactccgt gcgtgactcc
     8761 tgatagaagt caggattgcc gcggttcacg cccgccgtga aagtgttcag cacctccagg
     8821 tgcggctgcg tggtgacggt tgggaaatca aacgtccggt ggccgtactg gaaccgcgct
     8881 tcattcacca ggttgttctt gaatgtggaa gagaggctgc cgacaatcga ctggtcgcgc
     8941 aggttgttgt ctttgaagcc ggaaggcagg tcaaagccgt cattcagcgg agagacgtta
     9001 gtgagccggc cgtcattaaa gaagtagcgc aggaatccgt actggtgatc ggtgaaggag
     9061 tggtccatct tcacgatgaa attgtcgtaa tcgctcttac ggttctggtt cagggtctcc
     9121 ggcgaaagtc cgaagttctg cttgaacgtg ttgatggcgg caatattgtt caggatgatc
     9181 gagttgtagt acgggttctc gctgcgccgc tggccttcgt agttgccgaa gaagaaggtt
     9241 ttgcctttca caattgggcc gcccagcgta actccgaact ggttctgctg cagcttgttc
     9301 agtcccgggg cagcaagagg gctatttgcg tcaaaaacgt tgttgcgcag gtaatcgtaa
     9361 acgctgccgt gcagatcatt ggtgccgctt ttggtcacaa tgttcacgat tccgcccacc
     9421 gcgcgaccgg cttccacgct gtaagtgtta ttgatcacgc ggaattcgcg cactgcgtca
     9481 gtggacggtg tggttttttg cacgcccgac gccgtagaga tgttgtccgc tccatctacc
     9541 gcgatgaagt tgtaatggat gttctgtccg gcgaaggaaa gctttgtgac cggctcaatg
     9601 attacatccg tgctgcctga agtcgtgtcg ccaatcgtca cgcccggcgc cagcaatgcg
     9661 aaatcaataa attgccggcc gttcacaggc aggttctgga tttgctgctc cgcaatcact
     9721 gagtcagtgg aagtacgcgt ggtttccacc agcggtgcct cagttgtcac cgttacctgc
     9781 tgctctacct gcccggggac gagcgtaaaa tccaggctcg ccgtgtctcc caccgtaagc
     9841 tctacggctc tggtttgtgc ctggaaacct ggggcctcca ccaccacctt gtaattgccc
     9901 acgggcaacg cggcaatctg gtagtcgccg gtgtcgccgc tcacggtgga gcgggaaagc
     9961 ccggtgtcag tgttcgtcgc cgtgacttta gctttggtaa tcatggcgcc ggatttgtca
    10021 tacgtgcggc cctggagtga ggccgtgatg gtttgggctg acacaaaggc gcacagagca
    10081 accatggcaa gggtagcgag caggaaacgt ttcatggggg gacctcccgc aaaaagagga
    10141 ggaaactata gctcctgagt tcccgattgg caagaaattt gacatctaaa atatttagac
    10201 ctagaatttc gccccagttg tgcatcagcg cggcgaattc tgccatggcc gcacgcatac
    10261 ggttcccctt gacgagacat cacgatgggg ccagggaacc agagaggtgg gaatggcgga
    10321 gcggtttttc accaaagagg tccagtcgct ctacctgggt gccggacaag agtttcgcgg
    10381 cgaagggatc ctcgccgtta ccaaggcatt gctccagtcc ggcgtttctt acgtggccgg
    10441 ctaccagggg gctcccatct cccacctgat ggatgtcctc acggacgcca accacatcct
    10501 caaagaattg ggtgttcact ttgaacacag cgcttctgaa gcgacagcgg ctgcgacgct
    10561 tgcggcatcg gtgaattatc cgcttcgcgg cgcagttact ttcaaatcga ccgttgggac
    10621 caatgtagcc tctgatgcgc tggcgaatct cgcctccagt ggcgtgacag gcggcgcgct
    10681 ggtgattgtc ggcgaggatt acggtgaagg ctccagcatt atgcaggagc gctcgcacgc
    10741 cttcgccatg aagtcacaga tgtggctgct cgacccacgg cccaaccttc cttcgatcgt
    10801 gaatgcagtg gaacaggggt ttgcgctttc cgaagccagc aacactccgg tgatgcttga
    10861 gttgcgcatt cgcgcttgcc acgtccatgg acgatttgtc gccaaagata atgtccggcc
    10921 gaagttcaca ttgaaagatg ccatggaaaa tcccgttcgc gacgccagcc gcgttgtgct
    10981 gccgccgggt agcttcctgc atgagcagga gaagatcaag aagcgctggc cggccgcgca
    11041 gaagtttatt caggagcacc aactcaacga attcttcggc gatggtcagc aggattttgg
    11101 catcatcctg cagggcggca tgtacaacgc ggtgattcgc ggccttgaac tgctcggcct
    11161 ttcagatgct tttggcaaca ccaggattcc cctctatgtc ctgaacgtga catatccgct
    11221 gatagaggat gaggtgctgc gcttctgcgg aaacaaacgc gcagtcttgg tgattgaaga
    11281 aggtcaaccg gatttcattg agcagaacct gcacgcagtt ctgcgcaagg ccggcgttgc
    11341 caccagggtc catggcaagg acatgctgac gatggctgga gaatacaccg ccgccgtggt
    11401 aacaagagga ctgcttaagt tcgtggaaga gtgcgcgccg cagttgatca acgggcagca
    11461 gttgccttca ttagcccgcc gagtgtcccc gccagctcag tcaaacccac ttccaatcct
    11521 ggaaaagcaa gttcagccgc ggccgccgtc tttttgtact ggatgtccgg agcgcccgat
    11581 ctttaccgcg ctgaaacttg cggagcgtga gattgggcaa catcatgtcg cctgcgacat
    11641 cggttgccat ctcttctcaa tcctgccgcc gttcaacatt ggcgcgcaca ccatgggtta
    11701 tggacttggc tgggccagca atgcggcttt caacaccgac gaaaccagca agcgcaccat
    11761 cagttttatg ggcgacggtg gcttctggca caacggcctg accagcggtg tgggcaacgc
    11821 ggttttcaac cagagtgaca gcgtcctcgt ggtcgtggat aacagctata cggctgcaac
    11881 cggcgggcag gacattctct cctcgcaggc ggaaaatccc atacggacca cgaggcagcc
    11941 gattgcggat gcagtccgtg gcgttggcgt gaaatgggtc aagaccatca cccgcaccta
    12001 cgatgtggcg catttgcgcg acgttttcaa ggaagcgctc acgacaaaag aaaaaggtcc
    12061 aaaggtgatc gttgcgcaga gtgagtgctc gctcaaccag cagcgccgcg tgaaacccct
    12121 gatgaagaag cgcatggaag ccggggagcg cgttgttcgg gagcgctttg gcgtggacgc
    12181 cgaaacctgc accggcgacc attcttgcat tcgcctttcc ggctgcccgt ccctgacgat
    12241 caaacccagc ccggacccgc tgcggcttga tccagtggcc acggtcatcg atagctgcgt
    12301 gggctgcggc ttgtgcggcg aggtcgcgca cgcggcgcgg ctctgtccat catttttccg
    12361 cgctcagatc gttaccaatc cgagcacatg ggatcgcctc aagacgcggg tgagggagac
    12421 tgtgatcggg tttctgcagt cgcggcatga gaggcggctg tcagggattt ccgcctgagt
    12481 cgaaccatgg aaaccagcga gttactggac aacgcaccgc cagcgacccc ggccagtcag
    12541 gcccgggcga tcagtattgc cattcttgcc atgggtggcg aaggcggcgg tgtactggcg
    12601 gactggattg tggacatggc tgagcactgc gggtttctgg ctcagactac gtcagtcccc
    12661 ggtgttgcac agtgtaccgg cgccaccatt tattatgtgg ag
//
LOCUS       DASQYP010000266         7402 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_187360, whole genome shotgun sequence.
ACCESSION   DASQYP010000266 DASQYP010000000
VERSION     DASQYP010000266.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 7402)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7402)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7402
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_187360"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..216
                     /locus_tag="VE783_08625"
     CDS             <1..216
                     /locus_tag="VE783_08625"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53503.1"
                     /translation="AYGKDKNKPIMSNNTSTPADVKPEVYQQIMKSYFPCKQELNLSA
                     GSYTLKLGVLDRNSNRMGTMTTSVTVP"
     gene            378..1625
                     /locus_tag="VE783_08630"
     CDS             378..1625
                     /locus_tag="VE783_08630"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HYX53504.1"
                     /translation="MTSRPIAETARNTMLFREIVSIAIDSFRTSKVRFVLTALGMVIG
                     TGSLIMVVTIGLTGKQYVMNQIQAIGANLIYAYYEAGSNGSVTTGGGNDYLTVEDMRA
                     VQQEVPGIQAASPMIELHDRIGVGGGKERDILVLGVSPQYSTVRNLEVLAGRFFDDQD
                     SMSRAHVALVTQQFATRVFGGQASAIDSEIKINGLPFVIVGTFRERVETFGQSEIAGD
                     TVLIPASVGRYFTGNDAVKQLFFSVSDAGDVPRATEMIQQVLQSRHRPESVYRVENLT
                     QLLQVAGKTANALTLVLLAIALVTLIVSGVGIMNIMLANVRTRIREIGIRKAIGATNR
                     EIRLQFLTEAVLISLSGGVVGTVLGLAVPFSVRFLTEYRIPISGLSAIIAIFVATLVG
                     VIFGTVPATRAAQLDPVEALHYE"
     gene            1752..3704
                     /locus_tag="VE783_08635"
     CDS             1752..3704
                     /locus_tag="VE783_08635"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: protein motif:HMM:NF024703.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004386 - helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA helicase"
                     /protein_id="HYX53505.1"
                     /translation="MPSLHQFFAPGGVLSQAHPSYEFRRGQLQMAEAVEKALEERRHL
                     IVEAGTGTGKTLAYLLPVIRSGKRVIISTGTKTLQEQLFFKDIPFLEQHLGPLRVCYM
                     KGRNNYLCRQKLYDLTNQPVLNGLQEIEQYRQIAAWEPETQSGDRAELRELPETTQLW
                     PKLDARTERCTGQKCAQWDRCFITEMHRRAMESDIIIVNHHLFFADLALRQSGAPDAG
                     ILPEFAAVIFDEAHELEDVASSYFGVSVSNLRFEELARDIENTLQQKQCMTPSLLQAL
                     GRLRERARFFFGQLPSGEGRFAFADREAFLMKQGEDYDAIMKGLEQVFSSLELMPKKP
                     DEVFNFARRTQELKTQLAFIMESEDKNTVFWIEYRGEGRRRGGQSHVILQATPIDVSQ
                     ILSKTLFDTVDTAVLTSATLAVAGRQNGNFEYIRQRVGVTHARELVVHSHFDYQRQAI
                     LYVPPDMPDPRSTAFARSAADKIRRLLEVTQGRAFCLFTSYAQMNDIHDRLLGELPYP
                     MLLQGSAPKNALLEEFRLTPNAVLFATASFWQGVDVQGEQLSCVIIDRLPFAVPSDPV
                     VAARVRAINTAGGNAFYEYQVPSAVISLKQGFGRLVRSVKDTGVLALLDNRLTKQRYG
                     KTFLDSLPAYTRTDDLTEVETFFTRR"
     gene            complement(3737..3919)
                     /locus_tag="VE783_08640"
     CDS             complement(3737..3919)
                     /locus_tag="VE783_08640"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53506.1"
                     /translation="MAALRKLADDIEAETVALHSVSTATHATQDEFTIREVVIEILEE
                     SPEIVVASRKPTVIRD"
     gene            complement(4143..5981)
                     /locus_tag="VE783_08645"
     CDS             complement(4143..5981)
                     /locus_tag="VE783_08645"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53507.1"
                     /translation="MSVQEDLVEKGFQLAWFLYPDRQIAISILTGALNKLHVQHGLEA
                     RRSYWRDKHLKRRITRITREEADALQWLICFESEAYEKDQEQRHGASLHLLAIRYVKT
                     LVRVTTAMSSFHVNVGLQRLVYSYSTEEAQRFYEALTERYLGGDEYRRAKAALMQKLQ
                     QRFGALLETVRGQHGELRFAPCEAQEKWVDLSRRCLDFLTPWSTSGACPIPSDFGAHG
                     SKLPAQLSVRSGQSTDADRIEINRCHAFIDPTCFGRLAEALALDAPLRKLALPRFNMP
                     QETDMSGPPSPSPLSEVERDQINHQLKQESSRRRNSAPNALRVRLDGVDVKTIGVQTR
                     AEIALPLGEGAELIEVVTSDPEGQLLLGVYPVAYDEQGAFLPTELALNTARGILKLQV
                     TPDATTATATLSLSFAPQSGILAGVFSNREHPRAFLPKFVLPTLALALGFFIGRYPAV
                     REHRSTAAEPSVSRSQASQPVTAAAAPQKAPASVSLLPDAPAYSVRLVPDELATRSAG
                     SGATRRVLLPEQQSVIHFQLPIALAGKQGRFAVSLKTFLGQEQLLEVSSLRPSGSADH
                     PVLQVPVPSELLHGGEDYSLVLRTRTGSQWEDLSSYTFHVEAAPQP"
     gene            complement(6144..>7402)
                     /locus_tag="VE783_08650"
     CDS             complement(6144..>7402)
                     /locus_tag="VE783_08650"
                     /inference="COORDINATES: protein motif:HMM:NF024180.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="CHAT domain-containing protein"
                     /protein_id="HYX53508.1"
                     /translation="AAKALSAQEIQREMLNDDTVLLEYSLGEKRSFVFVLDQQSIRVV
                     QLAGQARIEQAARRMHRSVAAYGDSTLQGMNTLEDAVQQAVFNLSRLVLSPIPSDWLR
                     KRILVVPDGALEYVPFTALVRPAARGLAVGAPLVSAHEVVNLPSASSVAALRDRKTPE
                     TAFSGAVAVLADPVFELNDSRLRTRPEKTQKATEVQRREAGLVSLSDGTPPLTRSAVD
                     FGLARNMNINLRRLPGTRREAREILSLSLRSKAALDFDASRATAMSPELSRYGIVHFA
                     THGLLNSQHPELSGLVFSLVDKNGNAQNGFLQLQDIYNMNLPADLVVLSACETGLGKE
                     ISGEGLVGLTRGFMYAGASRVVASLWKVSDAATAELMQRFYRGMLQEHLSPPAALRQA
                     QISMWKQKRWHSPYFWAAFQIQGDWN"
BASE COUNT         1557 a         2113 c         2213 g         1519 t
ORIGIN      
        1 gcatacggga aagacaagaa caagcccatc atgtcaaaca atacttccac gcccgccgat
       61 gtgaaacccg aggtttacca acagatcatg aaaagttatt tcccctgcaa gcaggagctt
      121 aatctatcag cgggtagcta cacgcttaag ctcggcgtgc tggatcgcaa cagcaatcgc
      181 atgggcacca tgacaacgag tgtgaccgta ccctagtctc tgccttgctt cagtttgcaa
      241 atacgcgaga gccgcgaagc gggcgctctt tatgggcgca cctcgtgcag gtcgatccgt
      301 cccagccgag tagtgccttc ttatatccgg cccttaagtg accgccgcgc aacttgcatc
      361 ttccgtaaaa tagaaccatg acgagccggc cgatcgcgga aactgcgcgc aacacgatgc
      421 tcttccggga gatcgtgagc atcgcgatcg attccttccg caccagcaag gtacgttttg
      481 tgcttaccgc gctgggcatg gtgatcggga cgggctcgct gatcatggtc gtcaccatcg
      541 ggcttaccgg caagcaatat gtgatgaacc agatccaggc aatcggcgcc aaccttattt
      601 atgcgtatta cgaagccggc agcaacggct cagtaactac gggcggaggc aacgactatc
      661 ttacggtgga agacatgcgg gcggtgcagc aggaggtgcc gggaatccag gcggcgtcgc
      721 cgatgattga gctgcatgac cgcatcggag tgggcggcgg caaggagcgc gacattctgg
      781 tgctgggcgt ctcgccgcag tattccacgg tccgtaattt ggaagtgctt gcgggacggt
      841 tctttgacga tcaggattcc atgtcgcgcg cccacgtggc attagttaca caacagtttg
      901 ctacgcgagt gttcggcggc caggcttcag cgattgacag cgaaatcaag atcaacgggc
      961 tgccatttgt gatcgtcggg acgttccggg agcgagtaga gacgttcggg cagtcggaaa
     1021 tcgcaggcga caccgttctg attccggcca gcgtgggccg ctacttcacc ggcaacgatg
     1081 cggtgaagca gctgttcttc tccgtctcag acgccggcga tgtaccgcgg gcgacagaga
     1141 tgatccagca ggtgttgcag tctcggcacc gcccggagtc tgtatatcgg gtggagaacc
     1201 ttacgcaact gcttcaggtg gcgggcaaga ccgccaacgc gctgaccctg gtgcttctgg
     1261 cgatcgctct ggtgacgctg atcgtaagcg gcgtgggcat tatgaacatt atgctggcga
     1321 atgtccgcac ccgcatccgg gagattggaa tcaggaaggc gatcggggca acgaaccgcg
     1381 agatcaggct tcagttcctg accgaggcgg tgctgatttc tctttctggc ggagtcgtgg
     1441 gcacggtgct gggactggca gttcccttct cggtccggtt tctgacggaa taccgtattc
     1501 ctatttcagg cctgtcggcg atcatcgcca tctttgtggc cacactggtg ggagtgatct
     1561 ttggaacggt tcctgcaacg cgtgctgcgc agctcgatcc ggtggaagcg ttgcattacg
     1621 agtagccggg ctttcgttaa gtccattctt ttccacaagc agccgaaagt cgggcgaagc
     1681 acggtatcat agaacaacac tcgcctgtgt cggccacgtc ccaacccgct gctgcatcgt
     1741 cagaacgccg gatgcccagc ctccatcagt tctttgctcc cggaggcgtg ctgagccagg
     1801 cgcatccgag ctacgaattt cgccgcggac agctccagat ggctgaggca gtggagaaag
     1861 cgctggaaga gcggcgccat ctgatcgtgg aagctggaac aggaaccgga aagacactcg
     1921 cctacctgct gccggtaatc cgaagcggca agcgcgtgat catctccacc gggacgaaaa
     1981 cacttcaaga acagctcttc ttcaaggaca ttcctttcct tgagcagcac ctggggccac
     2041 tgcgcgtctg ctatatgaaa gggcgcaaca attacctgtg ccggcagaag ctttacgatt
     2101 tgacgaacca gccggtactg aacggattgc aggagatcga gcaataccgg cagatcgcgg
     2161 catgggagcc ggaaacgcag agcggagacc gtgccgagct cagggagctt ccggagacca
     2221 cccagctctg gccgaaactg gacgcgcgca ccgaacgctg caccggacaa aaatgcgcgc
     2281 agtgggaccg ctgcttcatc acggagatgc accgccgcgc gatggagagc gacatcatca
     2341 tcgtcaacca tcatctattc ttcgctgatc tggctctgcg gcagagcggc gcgccggacg
     2401 cggggatcct gccggagttt gcagcggtga tctttgacga ggcccacgag ctggaagacg
     2461 tggccagcag ctatttcggc gttagcgtca gcaatctgcg ctttgaagaa ctggcgcgcg
     2521 atatcgagaa cacgctgcag cagaagcaat gcatgacgcc atcgctgctg caggcgctgg
     2581 gccgactgcg cgagcgtgcg cgcttcttct ttgggcagct tccttcgggt gaaggccgct
     2641 ttgcttttgc tgatcgtgaa gccttcctga tgaaacaagg cgaagactac gatgccatca
     2701 tgaaagggct ggagcaggtc ttctcttcgc tggaactcat gccaaagaag ccggacgagg
     2761 tcttcaattt cgcgcggcgc acgcaggagt tgaagacgca gctggcgttc atcatggagt
     2821 ccgaggacaa gaacacggtg ttctggatcg aatatcgcgg cgaaggacgg cggcgcggtg
     2881 ggcagtctca cgtgatcctc caagcgacgc caatcgacgt atcccagatt ctcagcaaga
     2941 ctttgttcga tactgtcgat acggcagtgc tgacttcggc cacgctcgcc gttgccggac
     3001 gccagaacgg caacttcgaa tacatccgcc agcgtgttgg cgtgactcat gcgcgcgaac
     3061 tggtggtgca ctcgcatttc gactatcagc ggcaggcgat cctttacgtg ccgccggaca
     3121 tgcctgatcc gcgttcgacg gctttcgcgc gcagcgccgc cgacaagatt cgccgtctgc
     3181 tggaggtcac gcagggccgc gccttttgcc tgtttaccag ctatgcacag atgaacgaca
     3241 tacacgatcg cttgctgggc gagcttccct accccatgct gctgcagggg tcagcgccga
     3301 agaatgcgct gctggaagag tttcgcctta cgccgaacgc agtcctcttc gcgacggcaa
     3361 gtttctggca aggggtggat gtgcaggggg aacagttgag ctgtgtcatc atcgaccgcc
     3421 tgccttttgc ggtgccgagc gatccagttg tggccgcgcg ggtgcgggcc atcaatacgg
     3481 cgggcggcaa tgcattctac gaatatcagg tgccctcagc ggttatttcg ctgaagcagg
     3541 gatttggccg gctggtgcgc tcagtgaagg acaccggagt gctggctctg ctcgataacc
     3601 ggctgacgaa gcagcgttac ggaaagactt tcctggacag tctcccggct tacacacgaa
     3661 ccgatgatct gacggaagtt gaaacttttt ttacccgccg ataatccgcg cgcagctgtg
     3721 aatggccaaa gcgctatcag tccctgatca cggtcggctt gcgcgaggcg accacgattt
     3781 cggggctttc ttccaaaatc tcgatcacta cttcacgaat ggtgaactca tcctgggttg
     3841 catgggtcgc ggtgctcacg gagtggagcg cgacagtttc cgcttcaatg tcgtcggcga
     3901 gctttcgtaa cgcagccaca gtcttgctct ggtcgagccc aaaagcgtac cggcctgcgc
     3961 ggccggcaca atcaattgca gataatttct tttctccact tgccattccg agccccccgc
     4021 gctaagaacg ggccgcaacg gccgccttgc gccctgaatt tgcataccgc tgctgtttta
     4081 tacgagccgg cagcttagca gcgtggcagt ttcggagcac ttaggatcaa agagctggag
     4141 ggtcaaggct gcggtgcagc ctcaacatgg aaggtgtagc tgctcaggtc ttcccactgt
     4201 gacccggtgc gcgtgcgcaa gacaaggctg tagtcttcgc cgccatgcag cagttctgag
     4261 ggaaccggaa cctgaagcac cggatgatct gcgctccctg acggccggag tgaagatact
     4321 tcaagcagtt gctcctgtcc cagaaaggtt ttcaacgaga cagcaaacct gccctgcttc
     4381 cctgccagcg caatgggcaa ttggaaatgt ataacgctct gctgctctgg cagcagcacg
     4441 cgtcgggttg cgcctgagcc agcgcttctt gtggcaagtt cgtccgggac caggcgaacg
     4501 gagtatgcgg gcgcgtcagg caggagagac acgcttgcgg gagctttttg tggtgcggcg
     4561 gcagccgtga cgggttgcga cgcttgcgac ctggagaccg agggttccgc agcggttgag
     4621 cggtgctctc ggacggcggg atagcggcca atgaagaagc caagcgccag agccaaggtc
     4681 ggaagcacga actttggcag gaaagcccgc ggatgttcac ggttggagaa aacaccggcc
     4741 agaattcctg actggggagc aaaagagagt gataaagtcg ccgtggcagt ggtggcgtcc
     4801 ggagtgacct gtaatttaag aattcctcgc gctgtgttga gtgctagctc tgttggcagg
     4861 aatgctccct gctcgtcgta cgcgacgggg taaactccaa gaagcagctg gccttccgga
     4921 tcgctcgtaa ccacctcgat caattccgcg ccttctccca gcggaagagc gatttcagct
     4981 cgtgtctgta cgccaattgt ctttacgtcg acgccatcaa gccggacacg aagcgcattc
     5041 ggggctgagt tccggcggcg cgacgattcc tgtttgagct ggtggttgat ctgatcccgt
     5101 tcgacctcgg agagaggcga aggggaaggc ggcccggaca tatcggtttc ttgtggcatg
     5161 ttgaaccttg gcaaggccaa cttcctgagg ggagcgtcaa gggcaagcgc ttccgcgagc
     5221 cggccgaagc aggtgggatc aataaaagcg tggcaccggt taatttcaat acgatcagca
     5281 tccgtggact gtccgctccg gacggatagc tgagcaggca gtttgcttcc gtgagcacca
     5341 aagtcgctcg ggatcggaca agctcctgag gtgctccagg gtgtcagaaa atccaggcaa
     5401 cgccgcgaca ggtcgaccca tttttcctga gcttcacaag gagcgaagcg caattcgccg
     5461 tgctggccgc gcacggtctc gagcaacgcg ccgaacctct gctgcaattt ttgcatcagc
     5521 gccgccttgg cccggcgata ttcgtcgccg cccaagtagc gttctgtgag cgcttcataa
     5581 aagcgctggg cctcttcagt gctatagcta taaaccagcc gctgcagtcc cacgttcaca
     5641 tgaaacgaag acattgcggt ggtgacgcgg accagggtct tcacgtaccg gatggcgagc
     5701 aagtgcagcg acgctccgtg ccgctgctcc tgatctttct catatgcttc cgactcgaaa
     5761 cagatcagcc actggagcgc gtcggcttct tcgcgtgtga tgcgggtgat tctgcgcttc
     5821 agatgcttgt cgcgccaata gctgcggcgc gcttcgagcc catgctgcac gtgcagttta
     5881 ttgagcgcgc cggtgagaat agagatggca atctggcgat ccgggtacag gaaccaggcg
     5941 agctgaaaac ctttctcaac cagatcttcc tgtacagaca ccttcgcctc caggcaaaat
     6001 accggccgaa gccccttgat ctccggccgg ccttaagcgc aaacaccgta agagcagcca
     6061 cacgcccgag aactgcaagc gtgtgccgtt tcagtttcgt ctgcgctccg gccgaacagc
     6121 gtggcagttt cagacaaatc cgctcagttc cagtcgccct gaatctggaa agcagcccag
     6181 aagtatggtg aatgccagcg cttctgcttc cacatactga tctgcgcctg acgtaaagcc
     6241 gctggcgggg aaaggtgctc ctgcagcatg ccacgataga acctctgcat cagttcagcc
     6301 gtggcagcat ccgagacctt ccacaggctg gctacaaccc gggatgctcc ggcgtacatg
     6361 aagccacggg tcagaccgac gagaccttca ccgctgattt cttttcccag cccagtctcg
     6421 caggcgctca ggacgacgag gtccgccggc aaattcatgt tgtagatgtc ctgaagctgg
     6481 aggaagccat tctgcgcgtt gccattttta tccacaagcg agaacaccag gccgctaagt
     6541 tcgggatgct ggctgttgag aagaccgtgg gtggcaaagt ggacgattcc gtatctgctc
     6601 agctcagggc tcatcgcggt ggcgcggctg gcgtcgaaat ccagggcggc tttgctacgg
     6661 aggctaagag aaaggatttc acgtgcttct cgccgtgtac ctggcaatcg acggagattt
     6721 atgttcatgt tcctggccag gccaaaatca acagccgacc tggtcaaagg cggcgttccg
     6781 tccgataagg aaaccaggcc tgcttcgcgt ctttgcactt cggtggcttt ctgcgttttc
     6841 tctggacgtg tcctcaatcg agaatcattc aactcgaaga caggatcggc caaaacagcc
     6901 actgcgccgg aaaacgcagt ctccggtgtt ttccggtcgc gcagagctgc caccgaagaa
     6961 gcggagggaa ggttcaccac ttcgtgagca ctcacgaggg gtgcccccac tgccaagccc
     7021 cgcgccgcag gtctgaccaa agctgtaaag ggaacgtact ccagtgcgcc atcaggtacc
     7081 accaggatgc gtttgcgcag ccagtctgaa ggtatcggcg atagcaccag ccttgagagg
     7141 ttaaaaacgg cctgctgaac ggcgtcttca agagtgttca tcccctgcag cgtgctatcg
     7201 ccatacgctg cgactgaacg atgcatccga cgagcagcct gttcaatcct ggcctggcct
     7261 gcgagttgga ccacccgaat tgactgctgg tcaagaacga aaacgaaact gcgcttctcg
     7321 cctagggaat actccagaag aacggtgtcg tcgttcagca tctccctttg aatttcttga
     7381 gcggagagcg cctttgctgc ag
//
LOCUS       DASQYP010000267         6571 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_119702, whole genome shotgun sequence.
ACCESSION   DASQYP010000267 DASQYP010000000
VERSION     DASQYP010000267.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 6571)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6571)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6571
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_119702"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            210..1235
                     /locus_tag="VE783_08655"
     CDS             210..1235
                     /locus_tag="VE783_08655"
                     /inference="COORDINATES: protein motif:HMM:NF015056.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016811 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds, in linear amides
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetamidase/formamidase family protein"
                     /protein_id="HYX53509.1"
                     /translation="MRILAVALLCCATVFAQTPAEEGKVVRYSPKPSDLKYTYSASHP
                     PVAHLKSGNILETNTADCFGNTIKKPGDTLSMATGDNPLTGPFYIDGAEPGDTLAVKF
                     LQIDVDGNQGIGALAPGFGAINSTNYTPMLNEAIKEKIWFYPIDHATNTATFQALDSK
                     YTVKIPLHPFFGCIGVAPAGGEARSSIVPEAFGGNIDSPEASVGNTMYLPVNTPGALL
                     FLGDGHAAMGDGEVAGTAIEVPLRSRVQVHVIKGGKIAWPRFENDEYIMTLGAYRPLD
                     DALRIAFTELVGWIHSDYGLSEMDAYELLSKVAEIRLSEMVDPNYVVIAKIKKNFLPR
                     RTAVSTK"
     gene            complement(1244..2956)
                     /locus_tag="VE783_08660"
     CDS             complement(1244..2956)
                     /locus_tag="VE783_08660"
                     /EC_number="1.1.1.38"
                     /inference="COORDINATES: protein motif:HMM:NF010052.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004470 - malic enzyme activity [Evidence
                     IEA];
                     GO_function: GO:0004471 - malate dehydrogenase
                     (decarboxylating) (NAD+) activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent malic enzyme"
                     /protein_id="HYX53510.1"
                     /translation="MATKPAVTRAAIPRGMDLLNRHSLNKGTAFTAEERTEFGLHGLL
                     PPQIETLEAQVVRAYEAFQRKDDDLERHIYLRALQDTNEVLFYRLLLDHIEEMMPIVY
                     TPTVSLACEQFSHIYRRPHGLFVSYPLRHSILQLLRHRPNREVDVMVVTDGERILGIG
                     DQGAGGLGIPIGKLSLYTLIGGIRPERTLPIVLDVGTNNQERLNDPEYLGWRHERITG
                     EAYYDFIEQFVQAVKQELPGTCLQWEDFATTHARPILDRYCDQLLTFNDDIQGTAAAA
                     LGAVLSAVTLTKKSLKDQCVVMLGAGSAGVGVADGLCAAMKEDGLSDEEARSRFWMID
                     VNGLLHSGRTDLTPDQAVYAQPESHVADWKRSANGQIGLADVINQIGATVLIGLSTAG
                     GAFTEGIVREMARKAERPIIFPLSNPTSRAEAKPEDLIRWTEGRALVASGSPFKPVEY
                     NGRRIPIAQCNNIYIFPAIGLGVVASGARRVTEPMMLVAARTLAAHSPALIDPDAALL
                     PPLTELRSVAAEIAVAVGLEAQMAGLAPYMSAKQLRNRVMRTQWAPEYRNLSDQVEDL
                     DELL"
     gene            complement(3195..3692)
                     /locus_tag="VE783_08665"
     CDS             complement(3195..3692)
                     /locus_tag="VE783_08665"
                     /inference="COORDINATES: protein motif:HMM:NF020123.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TlpA disulfide reductase family protein"
                     /protein_id="HYX53511.1"
                     /translation="MKSLLTLFLSLALLSFGAFTGCTDSPSGGFAGKPAPDFTVNDAG
                     KTVSLHDYKGKIVLLNFWATWCPPCVQELPSLVRLQKELGNKATIMAVSVDVDQSAYN
                     NFLVSHEVPPLTIRGSKDTIDRLYGPTGYPETYVVDRNGTIRRKFIGPQHWDNQDFID
                     YLSKL"
     gene            3809..4894
                     /locus_tag="VE783_08670"
     CDS             3809..4894
                     /locus_tag="VE783_08670"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF025025.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HYX53512.1"
                     /translation="MEEPAHPTGPKVQVIIPARNEADCLGRCLESLVSQQGITFQITV
                     VDDNSTDSTRSIAESFAGVRVVTATEPRPGVSGKNNALICGVQGASAEWLLFTDADTW
                     HYPGSLSAAVAEAEQRGADLLSYSPEQELGSWYEAALQPVVFAELARTYPPDKVNDPT
                     SPITAANGQYILIKREAYEKVGGHAAVAPDILEDVGLARKIQKQGLKLYFRFGDGRVR
                     ARMYRSFSAMWEGWTKNLVRLFNHPLRLALLRGCEFLSIVGALVAAIYLFAKGAYLYA
                     PDALILSVGLWLLFQARIRRAHAPQWANLLALLGLPLFVSLLLRSWLHARVLGAVTWK
                     GRQYPNPAPDQPGKSSTAKESESPARS"
     gene            4905..5315
                     /locus_tag="VE783_08675"
     CDS             4905..5315
                     /locus_tag="VE783_08675"
                     /inference="COORDINATES: protein motif:HMM:NF013411.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-carboxytetrahydropterin synthase"
                     /protein_id="HYX53513.1"
                     /translation="MVYLTRKAEFSASHYYHNPEFTPEENQRMFGKCNNPNGHGHNYT
                     LEVTVKGQVDSRSGFVVDLKELKEIMNREVIDALDHRFLNKEVPEFGELIPTTENLAI
                     SIWNRLTPKLKIAELHRIRVYETPDLFVDYYGEA"
     gene            5312..5734
                     /locus_tag="VE783_08680"
     CDS             5312..5734
                     /locus_tag="VE783_08680"
                     /inference="COORDINATES: protein motif:HMM:NF013411.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-carboxytetrahydropterin synthase"
                     /protein_id="HYX53514.1"
                     /translation="MKAHLTRRYWFSASHRLHCDGMSAEENRAMYGKCNNPHGHGHNY
                     AVEVTVAGQVDAKTGMICNLVDLDQYVNEKIVERFGHENLNMLPEFSGVVPTTENLCI
                     ELFNILQRDFRFADVEKVRIEETMLNSFEYAGGKEIRN"
     gene            5781..6386
                     /gene="folE"
                     /locus_tag="VE783_08685"
     CDS             5781..6386
                     /gene="folE"
                     /locus_tag="VE783_08685"
                     /EC_number="3.5.4.16"
                     /inference="COORDINATES: protein motif:HMM:NF006826.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003934 - GTP cyclohydrolase I activity
                     [Evidence IEA];
                     GO_process: GO:0042559 - pteridine-containing compound
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0046654 - tetrahydrofolate biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTP cyclohydrolase I FolE"
                     /protein_id="HYX53515.1"
                     /translation="MKKVPEVSGLETASTDQLLRELLTRMGEDPTRDGLIKTPERMRK
                     ALEYLTKGSHENPEDVLMGALFEVNYDEMVIVKDIEMFSLCEHHVLPFFGKVHVAYIP
                     NGRVLGLSKIPRLVDIFARRLQVQERLTVQIAETIQNAIQPQGVGVVIEARHLCVMMR
                     GVEKQHSSAVTSHMLGSFRNSDKTREEFLSLIRNGKNGNGF"
     gene            6387..>6571
                     /locus_tag="VE783_08690"
     CDS             6387..>6571
                     /locus_tag="VE783_08690"
                     /inference="COORDINATES: protein motif:HMM:NF012334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HYX53516.1"
                     /translation="MAESRVAVITGASRGIGLTTAKAFAAAGFSVVITGRDQKKLDDV
                     RAQLGTDKTQALAFDVA"
BASE COUNT         1406 a         1805 c         2013 g         1347 t
ORIGIN      
        1 ggcatgtatg cgccggtcct agcctggaca gtcctcgtca tcggcgtgct ggtggccgcg
       61 gtcacctgga tcggacgcga acgcaaagga gcagatcttt ccaacacaat tgagtttccg
      121 ggtctggagc aagagcgcga agcagcgtag gtattcgttc aggtagatca ggcgggcagg
      181 cttctctata atcctgcgcg aggtccccga tgagaatcct tgccgttgct ctcctgtgct
      241 gcgccactgt gttcgcgcag acgcctgccg aagaaggaaa agtggtccgc tactcgccca
      301 aacccagcga tctgaaatac acctattcag cttcgcaccc tccagtggcg catttgaagt
      361 ccggcaatat tctggagacg aacacggcag actgcttcgg caacacgatc aagaagccgg
      421 gcgacacgct cagcatggcc accggcgaca accctctgac cggccccttt tacatagatg
      481 gcgcggagcc gggcgatacg ctcgcggtga agttcctgca gattgatgtg gatggcaatc
      541 agggcatcgg tgcactagcc ccgggcttcg gcgcgatcaa ttccaccaat tacaccccaa
      601 tgctcaacga agcgatcaaa gagaagatct ggttctatcc cattgatcac gccaccaaca
      661 cggcaacgtt tcaggcgctc gattcgaaat acacggtgaa gattccgttg catccattct
      721 tcggctgcat cggcgtggcg cccgccggag gcgaagcgcg cagctccata gtgccggagg
      781 cctttggagg caatatcgat tcgcccgaag ccagcgtcgg caacaccatg taccttcccg
      841 tgaacacgcc gggtgcgctg ctgttcttag gcgatggtca cgcagcgatg ggcgatggcg
      901 aagtcgcggg caccgcgatt gaagtcccgc tgcgcagccg tgtgcaggtg cacgtgatca
      961 aaggcgggaa gatcgcgtgg ccgcgttttg aaaatgacga gtacatcatg acgctgggtg
     1021 cgtatcgtcc gctggatgac gctctgcgta tcgccttcac cgagctggtg ggctggattc
     1081 acagcgacta cgggctctct gagatggacg cctatgagct gctgtcaaag gtcgcagaga
     1141 tccggctgag cgagatggtg gacccaaatt acgtggtgat cgcaaagatc aaaaagaatt
     1201 tcctgccgcg gcgtacggct gtctccacga aatagccaaa tgctcagagt agttcgtcca
     1261 ggtcctctac ttggtctgaa aggttgcggt actccggcgc ccactgcgtc ctcatgacgc
     1321 ggttgcgcag ttgcttcgca ctcatgtaag gcgcgagtcc agccatctgt gcttccagcc
     1381 cgaccgccac ggcaatctct gcagctacgc tcctgagttc ggtgagtggc ggtagcaggg
     1441 ctgcgtcagg atcaatgagc gcaggagaat gtgcggcgag cgtgcgtgct gcgaccaaca
     1501 tcatcggctc agttacgcgt cgcgcaccgg atgccaccac gcccagtcca atcgcgggaa
     1561 agatgtagat attgttgcac tgcgcgattg ggattctgcg gccgttgtat tccacaggct
     1621 tgaacggaga gccggacgcc accagcgcac ggccttctgt ccaccggatc aggtcctcag
     1681 gcttcgcttc cgctcttgag gtgggattgg agagcgggaa gatgataggc ctttctgctt
     1741 tgcgcgccat ctcgcgcaca atcccttctg taaacgcgcc accggcggtt gacaggccga
     1801 tgagtacagt cgctccaatc tgattgatta catcggcaag cccaatctgc ccgtttgcgc
     1861 tgcgcttcca atctgcaacg tggctttccg gctgtgcata gacggcctga tcgggagtca
     1921 gatccgtgcg gccggagtgc agcaggccat tgacgtcgat catccagaag cggctgcggg
     1981 cttcctcatc ggaaaggcca tcttctttca tcgcggcgca gaggccatca gccacgccca
     2041 ctcccgctga gccggctccc aacatcacca cgcactggtc tttcaaggat tttttagtca
     2101 gcgtcacggc tgaaagaacg gcgccaagag cagcagccgc ggtgccctga atatcgtcat
     2161 tgaaggtaag caactggtcg caatagcggt ccaggattgg ccgggcgtgg gtggtggcga
     2221 aatcttccca ttgcagacat gtgccgggca gctcctgttt cacggcctgc acgaattgct
     2281 cgatgaagtc gtaataggcc tcgccggtaa tgcgctcatg acgccagccg aggtattccg
     2341 gatcattcag gcgctcttgg ttgttcgttc ccacatccag cacgataggc agcgtgcgct
     2401 ccggacggat gccgccgatg agcgtgtaca gcgagagctt gccaatggga atgccgagcc
     2461 cgccggcgcc ctggtcgcca atgccgagga tgcgctcacc gtcagtgacc accatgacgt
     2521 cgacctcacg gttggggcga tggcgcagca gttgcaggat cgaatggcgt agcgggtagg
     2581 aaacaaacaa cccgtgcggg cggcggtaga tgtggctgaa ttgttcgcag gcgagcgaca
     2641 ccgtgggcgt atagacgatc ggcatcatct cttcaatgtg gtcaagcagc agccggtaga
     2701 agaggacttc atttgtgtcc tgaagcgcgc gcagatagat gtggcgctcc aggtcgtcgt
     2761 ctttacgctg gaatgcctca taggcgcgca caacctgcgc ttccaatgtt tcgatctgcg
     2821 gtggcagcaa gccatgaagg ccgaattccg tgcgctcctc agcggtgaaa gcggtccctt
     2881 tattcaggct gtgacggttt aagagatcca tgccgcgcgg aatagccgcg cgggtaactg
     2941 ctggctttgt ggccatgagc tcccccaatc tagttggatt tcctggggag cggatttgtg
     3001 actgcgtatt ttgacaggtg tagcgttcgg ggctgagggc tgcaggctgg tcggtgccgg
     3061 aaatcagaat tgagcgggga taagaagatt cagccgggtg aaagtgcgat cgggcctttg
     3121 aagggaactg cgaatcgcca gtaggggggc gaagttatcc gaacctgtcc ggactggtga
     3181 cgtgcgttgc gaacctaaag cttgctcagg tagtcaataa agtcctggtt gtcccagtgc
     3241 tgcggcccga tgaacttgcg gcgaatggtg ccgttgcggt cgacaacgta ggtttccgga
     3301 tagccggtcg ggccgtaaag gcggtcaatt gtatctttgc tgccgcgaat ggtgagcggc
     3361 gggacctcat ggctcacaag aaaattgttg taagcgcttt ggtcaacgtc aacgctgaca
     3421 gccatgatcg tggctttgtt tccgagctcc ttttgcaggc gcactagtga tggcagttcc
     3481 tggacgcacg gcgggcacca tgtggcccag aagttcagaa gaacaatctt gcctttatag
     3541 tcgtgcaggc ttaccgtttt gcccgcatcg ttcacggtga aatcaggcgc gggcttgccg
     3601 gcgaagccgc cgcttggact atcggtgcag ccggtgaacg cgccaaacga aagcagcgcc
     3661 aagctgagga acagggttag cagggatttc acaaacctat gataacccga ctcttagcgc
     3721 gaaaacagca gggaagaacc gcaatttgca gggcaattac gctgatggcg gctcgccatc
     3781 ggcacgccta taatctccag aacagcccat ggaagagcca gcccatccga ccggaccgaa
     3841 ggtccaggtc attattcctg cccgcaatga ggccgattgc cttgggcgct gcctggaatc
     3901 gctggtgagc cagcagggaa ttaccttcca gatcacggtt gtggacgaca actccaccga
     3961 cagcacgcgc tcgattgccg agtcgtttgc cggcgtgcga gtggtcacgg ccacggagcc
     4021 gcgccccggt gtgagcggaa agaacaacgc cctgatctgt ggagtgcagg gcgcctcggc
     4081 ggagtggctt ctttttactg atgccgacac ctggcattat ccgggatcgc tgtcggcagc
     4141 cgtggcggaa gccgagcagc gaggcgcgga cctactttct tattcccctg agcaggagct
     4201 gggatcgtgg tatgaagcag cgctgcagcc ggtcgtcttt gccgagctgg cgcggaccta
     4261 tccgccggac aaggtgaacg atccaacgtc gccgatcacc gccgccaacg gccagtacat
     4321 cctgattaag cgggaggctt acgagaaagt tggcggtcat gccgccgtgg cgcccgacat
     4381 tttggaagat gtgggcctcg cccgaaagat ccagaaacaa ggcctaaagc tttactttag
     4441 gtttggcgat ggacgcgttc gcgcgcggat gtatcgaagc ttcagcgcta tgtgggaagg
     4501 ctggaccaag aacctggtca ggctattcaa ccatcctctg cggctggctc tgcttcgcgg
     4561 atgcgagttc ttatcgatcg tcggcgcgct ggtggcggca atctacttgt ttgcgaaagg
     4621 cgcttacctg tacgcgccgg atgcgctgat tctctctgtt ggactctggc tgttgtttca
     4681 agcccgaatt cgacgcgcgc acgccccgca atgggctaac ctattggcac tgcttggctt
     4741 accgcttttt gtgtcacttt tgctccggtc atggctccat gccagagtac tgggcgcggt
     4801 aacatggaaa ggacgccagt acccaaatcc cgcacccgac cagccgggga aatcatcaac
     4861 tgctaaggaa tccgaatcgc cggcgcggtc gtaattgaga gttcatggtt tatctgacaa
     4921 ggaaagcaga gttttcggct tcgcactact atcacaaccc ggaattcacg ccggaagaga
     4981 accagcgcat gttcggcaag tgcaacaacc ccaacggcca cgggcataac tacacgctgg
     5041 aagtcacggt gaaggggcag gtggattcgc gatcggggtt tgtggtggat ctgaaggaac
     5101 tgaaagagat catgaaccgc gaggtgatcg atgcgctgga ccatcgcttt ctgaacaaag
     5161 aggtgccgga gttcggcgaa ctgatcccga ccactgagaa cctggcaatc agcatctgga
     5221 accggctcac gccgaagctg aagattgcgg aactgcatcg cattcgcgtg tatgagacgc
     5281 ccgacttgtt cgtggattac tacggagaag catgaaggcg cacctcacac gcagatactg
     5341 gttttcagct tcgcaccggc tgcattgcga cggcatgtcc gcggaggaga atcgcgccat
     5401 gtacggaaag tgcaacaatc cgcacggaca cggccacaac tatgcggtgg aagtgacggt
     5461 tgccgggcag gtggacgcga aaaccggcat gatttgcaat ctggtggacc tggaccagta
     5521 tgtgaacgaa aaaatcgtgg aacgtttcgg ccacgaaaat ctcaatatgt taccggaatt
     5581 ttcaggcgta gtgcccacaa ccgaaaacct ttgcattgaa ctgttcaaca ttttgcaaag
     5641 ggattttcgg ttcgcggacg tggagaaagt gcgaattgag gaaaccatgc tcaattcctt
     5701 cgagtatgcc ggtggaaaag aaatccgtaa ttaacgtgac taacgtttct ggggagcttg
     5761 acttgaagca gggagccgta atgaagaagg tcccggaggt ctcggggctg gagacagcca
     5821 gtactgacca gttgttgcgc gaactgttga cgcgcatggg cgaagacccc acgcgcgacg
     5881 gtctcatcaa gacgccggag cgcatgcgca aggccctgga gtacctgacc aagggctcgc
     5941 atgagaaccc cgaagacgtg ctcatgggcg cgctttttga agtgaattat gacgaaatgg
     6001 tgatcgtgaa ggacattgag atgttcagcc tttgcgaaca ccatgtgctg ccgttcttcg
     6061 ggaaagtgca cgtggcctat attcctaacg gccgcgtgct ggggctgagt aagatcccgc
     6121 gcctggtaga catctttgcc cgccgccttc aggtgcagga gcgcctgact gtgcagatcg
     6181 cggagaccat ccagaacgcc atccagccgc agggtgtggg cgtggtgatt gaggcgcgcc
     6241 atctgtgcgt gatgatgcgc ggagtggaga agcagcattc gtctgcagtg acgtcgcaca
     6301 tgctgggcag cttccgcaac tcagacaaga cgcgcgaaga attcctatca ctgatccgca
     6361 acggaaagaa cggaaacggc ttttagatgg ccgaatcccg cgtcgcggtg atcacgggcg
     6421 ccagccgcgg catcgggctg acgacggcca aagccttcgc ggctgcggga ttttcggtgg
     6481 ttatcacggg gcgcgaccag aagaagctgg atgatgttcg cgctcagttg ggcacagaca
     6541 agacacaggc gctggctttc gatgttgccg a
//
LOCUS       DASQYP010000268         2278 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_245133, whole genome shotgun sequence.
ACCESSION   DASQYP010000268 DASQYP010000000
VERSION     DASQYP010000268.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 2278)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2278)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2278
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_245133"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..431
                     /locus_tag="VE783_08695"
     CDS             <1..431
                     /locus_tag="VE783_08695"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53517.1"
                     /translation="KKKAIVVLSDEDGRFSRSVSVSQSSSSGSPSVAASSVTPARPSA
                     KTDSGGSGKSADTQGTSGATSTKQKLDFYKSELDSWKSITKRDEDLLANERVSFRQQM
                     YQDALQGDRQTTTFFQKKVDELQNELSKSKKDENSNSGGK"
     gene            1306..2274
                     /locus_tag="VE783_08700"
     CDS             1306..2274
                     /locus_tag="VE783_08700"
                     /EC_number="3.2.2.-"
                     /inference="COORDINATES: protein motif:HMM:NF012933.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000701 - purine-specific mismatch base
                     pair DNA N-glycosylase activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0006284 - base-excision repair [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="A/G-specific adenine glycosylase"
                     /protein_id="HYX53518.1"
                     /translation="MPPAPFTNQYLRRFRGMLASWYAQVQRTLPWRGESDPYRVLVSE
                     IMLQQTRVAVVIERYKRFLMRFPSAAHLARAREQSVLAEWSGLGYYRRARSLQGAAKA
                     VVKQGGFPGSAAELMELPGVGRYTAAAVASICFGEPVAVVDGNVRRVLDRLTGRELNE
                     QDYWRWAGELLDRERPGDFNQAMMELGATVCLPRNPQCDRCSVTDLCVSRGAHEQRKQ
                     ERRRKATLRYMLVQREDKVLLRQRPATVSLMPGMWELPETGAQIGEPFLKLRHSITVT
                     DYSVLVYARTSGRHEEGKWIKADRLGKLALTGLTRKIFRAARTADR"
BASE COUNT          533 a          618 c          666 g          461 t
ORIGIN      
        1 caaaaaagaa agctatcgta gtcttgagcg atgaggacgg ccgtttctcc agaagcgtta
       61 gtgtttcaca gtcgtcttct tcgggctctc cgagcgttgc ggcttcaagc gtcacccctg
      121 cccgaccttc ggcgaaaact gattccggcg ggtcaggcaa gtctgcagat acccaaggta
      181 cttccggcgc aacgtctaca aagcagaaac tggactttta taagtcagaa ctggactcct
      241 ggaaaagcat aaccaagcgt gatgaagatt tgctggcgaa cgaaagagtc tcttttcgtc
      301 aacagatgta tcaggatgct ctgcagggtg atcgacagac cacaaccttt ttccagaaaa
      361 aggttgatga actccagaac gaactttcga aaagcaagaa agatgagaac agcaactccg
      421 gcggaaaata gagagttatg atctaagttc ggggcacaag gaccggccgt ttatctgctg
      481 ctttgctcgt cttccatatc cagccatatc aagcggctga agcgccgcag cccgaaagga
      541 aatcacccgt cgcgattcac gagcggacgc gatggtgcat gtgcgccgtc gccgctggta
      601 ccagagcgag ttcgcaaaca gccatatcta gcggcaatgg atacggccta acgcccgccg
      661 tgcgctcatc cttcagttac ctgcgttttc caatctgtta ttaatacaat gttctcgtct
      721 ctcaaggctg cggcaggcgt actgcttctg cccgcatgtg tttgcgcaaa ccgcgcggag
      781 cccggcagac cgcaagtatc aaggcgatgc agcagcgttc cgccacagat tttgaccttt
      841 cggcggctgc gcattgcaca gatcaacccg gccggaaaag gcctgactca aactcctgcg
      901 tgcgccggac tcgcgcaccg tggcatgaga caaaccttca acgctatata gcccgttgta
      961 gcaaacgtaa tgaccggcag gccgtcgtag aacagagcga cgcgtaacgc agatcacagg
     1021 cggggtgttc cgccgcggac gcgaatggca ctgcaggcga accgacgatg ctgacggctt
     1081 acgctgagca gcacgcaaga actgtgccgt tggttacttg aggtttttca tgggattttc
     1141 aggggcatac gagccctgac cggcagtgca aaagcgctgc tgcctcccca gatgcagtta
     1201 cttcgtacaa aaaccagccg gtgagccggc tggttttttt gcgtcctcat gggtgcaaag
     1261 cgacgaaacg gtttcatggg tcgattacaa ttggcagcgc atcccatgcc tcctgccccg
     1321 ttcacaaacc agtatctgcg ccgtttccgc gggatgttgg ccagttggta tgcgcaagtg
     1381 cagcgaacgc ttccgtggcg tggagagagc gacccgtatc gcgtcctggt ttctgagatc
     1441 atgctgcagc agacccgcgt agccgttgta attgaacgct acaaacggtt ccttatgcgc
     1501 tttccgtcag cagcgcatct ggcgagggcg cgcgaacaat cagtactggc cgagtggagc
     1561 gggcttggct attaccgccg agcacgatca ttacaggggg cggcaaaggc tgttgtgaag
     1621 cagggcgggt tcccgggatc agcagcagag ctcatggagc tgccgggcgt ggggcgctat
     1681 acggctgcag cagtggccag catctgtttc ggcgagcctg tcgcggtggt ggatggcaac
     1741 gtcaggcgtg tactggatcg cctcaccgga cgcgaactca acgaacagga ctattggaga
     1801 tgggccggag agctgctcga tcgtgaaagg cctggtgact tcaatcaggc aatgatggaa
     1861 ttgggcgcaa cagtctgcct gccgcggaac cctcaatgtg atcgatgttc ggtaactgat
     1921 ctttgtgtat cccgcggggc gcacgaacaa agaaagcagg agcgccgccg caaggcaacg
     1981 ctgagataca tgctggtcca gagagaggac aaggtgctgt tacggcagcg cccagccacg
     2041 gtttcgctga tgccgggaat gtgggagctt ccggaaacag gagcacagat cggcgaacct
     2101 ttccttaagc tgcgccactc aatcactgtt accgattact ctgtgctggt ttatgcacgg
     2161 acatccggca ggcatgaaga aggcaagtgg atcaaagcag atcgcctcgg caagctggca
     2221 ttgaccggcc tgacacgaaa gattttcaga gcggcgcgaa ccgcagaccg gtaaacaa
//
LOCUS       DASQYP010000269         6175 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_187534, whole genome shotgun sequence.
ACCESSION   DASQYP010000269 DASQYP010000000
VERSION     DASQYP010000269.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 6175)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6175)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6175
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_187534"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..991
                     /locus_tag="VE783_08705"
     CDS             <1..991
                     /locus_tag="VE783_08705"
                     /inference="COORDINATES: protein motif:HMM:NF013702.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="1-acyl-sn-glycerol-3-phosphate acyltransferase"
                     /protein_id="HYX53519.1"
                     /translation="SLAEAKLRGTAVATAPAAVAASGDLGELIASISGKRVALKPGDH
                     LENDLNLSSLERVELMAAIENRYQIDLNDSEFSAVNTVNDLERLLKHTAPEQEIKKDY
                     PYSRWGLSWPIRLLRTLAFHLVTRPYIWVMARPKIIGRERVNDFQGPALIISNHITQN
                     DIGFLMAALPFRLRNRLAVAMQGEMLKDMRYPPKETFFFKRWWMPVRYALIVTFFNVF
                     SLPQRARYRESFRFAGEMADKGYNVVIFPEGKRTETGDMNPFRSGIGLLAKDLDLPVI
                     PMRIDGLFPFKAAKKHYAPPGAIQVRIGKPVKFDPHADPEEIALELERKVKAL"
     gene            1079..2062
                     /locus_tag="VE783_08710"
     CDS             1079..2062
                     /locus_tag="VE783_08710"
                     /inference="COORDINATES: protein motif:HMM:NF012376.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HYX53520.1"
                     /translation="MTPRWVKLAGLGVITFVLTLGFLHLIESLRRPQHARSVSPYSFD
                     IPPARHGEVVLAAGDIADCDHLAAAEVTAKMLDQMPGTVLTLGDNVYPNGTAASYQEC
                     FEPTWGRHKEQIHPAPGNHDYSTPSAAGYFEYFGPLAGEKGLGYYSFDVGAWHVISLN
                     SQCKYAGGCERGSRQELWLRQDLKQNAGKCILAYWHNPLFSSGRHGHDLSVKPFWDDL
                     YEAGADIVLNGHDHDYERFAPQNTEGAPASNGIREFVVGTGGSGNRVIFGSAPNSEER
                     SDNAFGVLRLALRPEGYDWDFIPADRTGFSDGGTGTCKNFALRQPAQRAAN"
     gene            complement(2966..3652)
                     /locus_tag="VE783_08715"
     CDS             complement(2966..3652)
                     /locus_tag="VE783_08715"
                     /inference="COORDINATES: protein motif:HMM:NF024895.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane beta-barrel protein"
                     /protein_id="HYX53521.1"
                     /translation="MVRYVRIVILATFISFISLSQLSAQELDENDHINTNLAFPVTVP
                     VSTTSDLVKLGTGVTAGAGYNFNQHHAFVGEIMWNWLYPTDASLAPLRNALGSTALNG
                     HSNLFAFSANYRFEMRGKRFGGYVIGGPGLYYRNADLSTSVTAPSGTPCTPVWQWWGY
                     HCSSGIVLNETHSTFSSSVLGGNFGGGVTVKVGNEARYRMYVEARYHYVPFQNNATVR
                     LLPITTGIRF"
     gene            complement(3728..4198)
                     /locus_tag="VE783_08720"
     CDS             complement(3728..4198)
                     /locus_tag="VE783_08720"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HYX53522.1"
                     /translation="MSNPIFVMPAPQVDFPQVRPRQFRVLLADDNPGILQQVCAMIGK
                     DFDIVAALPDGESALKKALELKPDLLILDISMGRMSGLEVAHILRERGLTSRLMFLTI
                     HQESDFVEAAWASGATGYVVKSHLTSDLIPAVSAVMEGDLFMSPCLAQSDNLTN"
     gene            complement(4331..4972)
                     /locus_tag="VE783_08725"
     CDS             complement(4331..4972)
                     /locus_tag="VE783_08725"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HYX53523.1"
                     /translation="MSKPRILIADDHVLVAEACKKLLEAEYEVVDIVRDGRTLVQAAA
                     EQKPQVVLVDIGMPILNGLDAGQQIKEAAPATRLVYLTMNGDVELAAEAFRRKASAYI
                     LKTCAASELLIALRTVLRGGTYLSPAISKDAVGFLVRQKKELVNEGERLTERQREVLQ
                     LLAEGKSMKEVAAILSVATRTVAFHKYRMMEQLKVKTNAELVQYAIKHHIIAA"
     gene            complement(4982..>6175)
                     /locus_tag="VE783_08730"
     CDS             complement(4982..>6175)
                     /locus_tag="VE783_08730"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain S-box protein"
                     /protein_id="HYX53524.1"
                     /translation="AAERERWFQMSVVRLVGCKRSVVVSHVDITERKLAELEVRESER
                     RFRLMADSAPIMIWMSGTDRLRSNFNKCWLDFTGSTPEKEAGDGWLRALHTDDLPNYL
                     AAYHGAVNARRPFCVEYRLRRFDGEYRVLADRAVPRFRDDGSFTGYIGCCIDLTEQKE
                     TERMRAEIGGRLIQAQEEERRRIARELHDDINQKLGLLAIDLQQLQQRATELTADSQQ
                     TLTALFERTNKISSDIQHLSHQLHSSRLDYLGLSAALRRLCEEFRAQHSIQMKTNIAD
                     MPRSVSRDANLCLFRIAQECLNNTAKHSGATQVTVELSNAEGRMTLSVSDDGKGFEAG
                     RKEDGREPGLGLISMRERLRLVKGELSIESQPGKGTHITAAVPSQEPVKAVIYEEEEA
                     ARAAV"
BASE COUNT         1364 a         1732 c         1708 g         1371 t
ORIGIN      
        1 cagcctcgcg gaagcaaagc ttagggggac agccgttgca accgcgccgg cggcagttgc
       61 tgcgtcaggc gatctgggag agctaatcgc cagtatttcc ggcaaacggg ttgcgcttaa
      121 accaggcgac catctggaaa acgatctcaa cctgagttca cttgaacgcg tggagttaat
      181 ggcggccatt gagaatcgtt accagatcga cctgaacgat agtgagttct ccgccgtgaa
      241 caccgtcaac gatctggaga gactgctgaa gcacacagca ccggagcagg aaatcaaaaa
      301 agattacccc tactcacgtt ggggcctttc ctggcccatc cggctgctcc gcacgctcgc
      361 cttccacctg gtgacccgac catatatttg ggtgatggcg cgtccgaaga tcatcgggcg
      421 tgagcgcgta aacgatttcc aaggaccggc gttgatcatc agcaatcaca tcacgcagaa
      481 cgatatcggc tttttgatgg cagcgcttcc cttccggctg cgcaatcgcc tggcggtggc
      541 aatgcagggc gagatgctga aggacatgcg ctatccgccc aaagagacct tttttttcaa
      601 gcgctggtgg atgccggttc gctacgcgtt gatcgtgaca ttcttcaacg tgttttccct
      661 gccccagcgg gcacgctatc gcgagagctt ccgcttcgcc ggcgagatgg cggacaaggg
      721 ctacaacgtg gtgatctttc ctgagggcaa gcgcaccgaa accggtgaca tgaatccgtt
      781 ccgcagcggc atcgggctgc ttgccaaaga tcttgatctg ccggttattc caatgcgtat
      841 tgacgggctg tttcctttta aggcggcgaa gaagcactat gctccgcccg gtgcgatcca
      901 ggtaaggatc ggcaagcccg tgaagtttga tccacatgcc gatcctgagg agattgcgct
      961 ggagttggag cgtaaggtta aggcgctgta agacggcccg gttccgatcc tccacgcgtg
     1021 atcgctatca cttcattgcc tcagccccgg cactaacctg aatgcgagct gcacgaacat
     1081 gactcctcgc tgggtaaaac tggccggcct tggcgtgatt acttttgtat tgacgctggg
     1141 gtttcttcac ctcatcgaat cgctcaggcg gccccagcac gcccgcagcg tgtccccgta
     1201 ctcctttgat atcccgcctg cgcgtcatgg tgaagtggtg ttggcggccg gcgacatcgc
     1261 cgactgcgac catctggcgg ccgcagaagt tacggccaag atgctggacc agatgcccgg
     1321 gaccgtgctg acgctgggcg ataatgtgta tccgaacggc accgcggcaa gctaccagga
     1381 atgttttgaa cctacctggg gaaggcacaa ggagcagatt catcccgcac cggggaatca
     1441 tgactactcc actccatcgg ccgcgggata tttcgaatac tttgggccct tggccggaga
     1501 aaaagggctg ggctactaca gcttcgacgt gggcgcgtgg cacgtaatat cgctcaacag
     1561 ccaatgcaaa tatgccggcg gctgcgagcg tggttcaagg caggagctct ggttacggca
     1621 ggacctcaag caaaatgccg gtaagtgcat cctggcttac tggcataacc cgctcttcag
     1681 ttccgggcgg catggccacg acctttccgt aaagccgttt tgggatgacc tctatgaagc
     1741 cggcgcggac attgtgttga acggtcatga tcacgattat gagcgctttg cgccgcagaa
     1801 cacggagggc gcgcccgcta gcaacggaat ccgcgagttc gtggtgggaa ccggtggaag
     1861 cggtaaccga gtgatattcg gttcagcccc aaactcggaa gagcgtagcg acaatgcttt
     1921 tggtgtgctc cggctcgcac ttcggccaga aggttacgat tgggatttca tccccgccga
     1981 ccgtaccggg ttctcggatg gcggaaccgg aacgtgcaag aactttgcat tgcgacagcc
     2041 cgcgcaacga gcagcaaatt gatccaatct tgcacgatcg gagcttaggc ccaatgtgcg
     2101 tagaagattt tgggtccgaa agcagacagg ctggcgaatt gcttcgccag cctttttggc
     2161 gttgaccttc gctgagcggc acggaactgg gcaaagcccg tgctgatgaa ggtttcccaa
     2221 ccttgaaaca cactgcgggg acgtgtcacc acggagggcg tccggacgaa cgtgcgcaag
     2281 catccacagc ttttctcttc gatcgcaaaa acacgcacga ccgagtgcct taaatcgcgc
     2341 tgccgcccgg aagaacagca gacgttatcc aaaattgttg gtacctggtc ctgctcatgg
     2401 ggaagaagcc ggcgcaaaat gcgccgatac ttactggtgg gatctcgcta ggttcaagcc
     2461 attagagaac ccggaagccc cttctccgag ttgcgatggt ggctaaggta gtttcctaag
     2521 attagggaat ggtgaaaccg aaattagatc ttttaacgtt agcgcgaatc agcagacgaa
     2581 aaagatgtgt tgaattgttt ttcatcttaa aaacacaaga acaaagcccc tgctcggcgc
     2641 agccattccg atcaatggaa accatatgaa acagctcatg gtctttgcat ctctgcatat
     2701 gcacctcagc ccacgcatga gcaaaaaatt gaaccagcgc acgcgaaatt cgcttgcgct
     2761 cgtgtattat tgcgcaacgc aactcgcgca atttgcgaac ctggccgcct gtatcgcgtc
     2821 gcatcggcgc gttcagtata gggaggcggc caggcttttg attgtggtcc gtccgcagat
     2881 tttcaaacca attccgtaaa ttgcgttatc cagctaatct tcgcctcata actgcccatt
     2941 agcgcacgcc aggaaccacc ggcttttaaa acctgatgcc ggttgtaatc gggagcaatc
     3001 gtacggtggc gttgttctgg aacggcacgt agtgatagcg cgcttcaacg tacattcggt
     3061 agcgcgcctc gtttcccacc ttcacggtta ctcctccgcc gaaattgcct cccagaaccg
     3121 aggatgaaaa cgtggagtgt gtttcattca gcactatgcc ggatgaacag tggtatcccc
     3181 accattgcca caccggtgtg cagggcgtgc cactgggggc ggtgacgctg gtggaaaggt
     3241 cggcgttgcg gtagtagagg ccgggtccgc cgattacgta tccgccgaag cgcttcccgc
     3301 gcatttcaaa gcgatagttg gcgctgaatg cgaacagatt gctgtggccg ttcaacgccg
     3361 tggagccaag tgcgttgcgc agaggggcaa gtgacgcgtc cgtggggtag agccagttcc
     3421 acatgatctc tcccacgaac gcgtgatgct ggttgaaatt gtatccggcg ccagctgtca
     3481 ctccggtccc gagttttacc agatcagatg tggtactcac gggcacggtg acgggaaagg
     3541 ccagattcgt gtttatgtga tcgttctcgt ccaattcctg ggccgacagc tgagataaag
     3601 agatgaaaga tatgaaggtc gcgagaataa caattcgaac gtagcggacc acatgagcct
     3661 ccggcaatgc aatccttatt tttgacggga aggaaatgag cgggtactgt cagaattgac
     3721 agtcgaatca gtttgtcagg ttgtctgact gagccagaca aggtgacatg aacaaatcgc
     3781 cttccatgac tgccgatacg gccggtatga gatcactggt caggtgtgac ttcacaacgt
     3841 aaccagtcgc accggacgcc catgcagcct ccacaaagtc actctcctgg tgaatagtga
     3901 ggaacatcag acgggaagtt aaaccgcgct cccgcagaat atgtgcgact tcaaggccgc
     3961 tcattcgtcc catcgagata tccagaatga ggagatcagg ctttagttca agcgctttct
     4021 taagtgcact ttcaccatcg ggcagggccg ctacgatatc aaagtctttg ccgatcatcg
     4081 cgcaaacctg ctggagtatt cctgggttat cgtccgcgag caaaaccctg aactgacgtg
     4141 gacgtacttg cggaaaatcg acttgaggtg cgggcatgac aaaaattggg ttcgacataa
     4201 aacgttaaga aaaccttaac ttctgcccag taccgagcct actgtcaaag ttaacaggga
     4261 ttcgattgca ttcgcctact ggaaaagaaa aagcgccctt ctttggggcg cccttttgag
     4321 aaaccgtcgg ttaagcagcg atgatgtggt gtttaatggc gtattgaacc agttccgcgt
     4381 tcgtttttac tttcagttgc tccatcatcc tgtacttgtg gaaggcaact gttcgcgtgg
     4441 caacactgag aatcgcggcc acttctttca tcgacttccc ttccgcgaga agctgcagca
     4501 cttctcgctg ccgctctgtt agacgctcac cttcattcac cagctctttt ttctggcgta
     4561 cgaggaaccc gaccgcgtct ttggagatcg cgggcgaaag ataagttcca ccacgcagaa
     4621 cagtgcggag tgcaatgagc aactccgatg ccgcacatgt cttcaggatg taggcagacg
     4681 cttttcggcg aaaggcctca gcggcgagtt caacgtctcc gttcatcgtc aagtagacaa
     4741 gcctcgtcgc cggcgcggct tccttgatct gttgcccggc atccagacca ttgaggattg
     4801 gcatcccgat atcgaccagg acgacctgag gtttctgttc cgccgctgcc tggaccaacg
     4861 ttcgaccgtc gcgaacgata tctacgacct catactcggc ctcaagcagt ttcttgcaag
     4921 cctctgcaac cagcacgtga tcgtcagcaa tcagtattcg cggcttcgac ataagtacct
     4981 cctaaacggc tgctctggcc gcttcttctt cttcgtagat gacggcttta actggttctt
     5041 gagagggcac agccgccgtt atgtgcgttc ccttccccgg ttgtgactcg atagagagct
     5101 cgcccttcac gagacgcagc cgctcgcgca tgctgatcag ccccaggcca ggctcgcggc
     5161 cgtcttcttt tcgaccagcc tcaaatccct tcccatcatc gctcacgctg agggtcatgc
     5221 ggccttccgc attgctcaac tccacagtca cctgagtggc cccgctatgc ttcgccgtat
     5281 tgttcaggca ctcctgtgct atgcggaaca ggcagagatt ggcatcgcgc gaaacgctcc
     5341 gcggcatgtc tgcgatgttg gttttcatct ggatggagtg ctgcgccctg aactcttcac
     5401 acaaacggcg caaggcggcg ctaaggccga gatagtccag ccgcgacgag tgcaattgat
     5461 gtgagagatg ctggatgtca gacgaaatct tgttcgtgcg ttcaaacagg gcggtgagag
     5521 tttgttgcga gtcggcagtc agctcggtcg cgcgctgctg caactgctga aggtcaatgg
     5581 ccagcagccc cagcttttga ttgatatcat cgtgcagctc gcgggcaatg cgccgccttt
     5641 cctcttcctg agcctgaatc aggcggccac caatttcagc gcgcatgcgc tcagtttcct
     5701 tctgctccgt caggtctata caacaaccga tgtagccggt aaagctcccg tcatccctga
     5761 accgtggaac cgcacggtcg gccagaactc gatattcgcc gtcaaagcgg cgcaggcggt
     5821 attcgacgca gaagggtcga cgcgcattca ccgcgccgtg ataagcggca agatagtttg
     5881 gtagatcgtc tgtatgcaag gcgcgaagcc atccatctcc tgcttctttt tccggagtgc
     5941 tgccggtgaa gtccagccag catttgttga agttggagcg aagccggtcc gtgccggaca
     6001 tccagatcat gatcggcgcg gaatccgcca tcaaacggaa gcgccgctca ctctcgcgca
     6061 cctcaagctc cgcaagtttg cgttccgtga tgtcaacatg gcttaccacc acgctgcgct
     6121 tgcatccgac caggcgaaca actgacatct ggaaccagcg ctcacgctct gcagc
//
LOCUS       DASQYP010000270         2330 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_138167, whole genome shotgun sequence.
ACCESSION   DASQYP010000270 DASQYP010000000
VERSION     DASQYP010000270.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 2330)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2330)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2330
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_138167"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(32..1825)
                     /locus_tag="VE783_08735"
     CDS             complement(32..1825)
                     /locus_tag="VE783_08735"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004672 - protein kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein kinase"
                     /protein_id="HYX53525.1"
                     /translation="MESGTQIGVYRVLKLLGAGGMARVYLAEDSRLGRKVALKVLPPD
                     SVQNPERVRRFEQEARAASGLNHPNILTIYDIGDVDSTKFIATEFVEGQTVRDLLLHP
                     VSLLNALDIGIQAAAALSTAHAAGIVHRDIKPENLMVRPDGFVKVLDFGLAKLTQTSP
                     DSIYGDRTVDVTMPGVVMGTLGYMSPEQLRGLQVDARTDVWSLGAVLYEMVTGKPPFT
                     EPTPTDTMIAVLQRDPPAVRLLRIEAPEELERILSKALAKSADERYQTIKDLGIDLKR
                     LKQRMEVEAEQQRSGMRPAPVPTPAPPAPAPPKKKIAAGMIAFLVVAVLAAIAIVGWA
                     VKKKERQSPETQSSGIPVHTAPAVPSLPATSKTERKSAGAGPGGAAGAETGTETAAGP
                     ATGAGQVDLSKIVPNINIPVPGEVGDLGPRKGERELTYSLLVQPTGGAAFKSSGKDPL
                     KSGWKFSFNVASAQTGHLYLIDQPEKGTLSLLFPNSKVNKGVSLISGKPLRIGPYTLD
                     ANPGKEKLWIVWSSRPVLHLDLAINFSKTLNSPGIPKETRENAVRKQFEEFLTNYQNP
                     GSQAATQPSGAEVKIISHVDPLIYAVDIEHR"
     gene            complement(1960..>2330)
                     /locus_tag="VE783_08740"
     CDS             complement(1960..>2330)
                     /locus_tag="VE783_08740"
                     /inference="COORDINATES: protein motif:HMM:NF012382.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HYX53526.1"
                     /translation="IAAVTQGRDWLKDFVRHLQAQSDYVVQRLAAWPGVKASPPQGTY
                     VIFPDVRSLTTDSAAFCDHLRDRAKVALVPGLPRWFGPGSEGHVRICFATSRKILAEA
                     FDRMEPVVAEFSPAGMAQSR"
BASE COUNT          447 a          689 c          703 g          491 t
ORIGIN      
        1 acaatcggct acagcaggag actgctgtct gctagcggtg ctctatgtcc accgcgtaga
       61 tcagcggatc gacatgtgaa ataattttca cctcggcgcc tgaaggctgc gtcgcagcct
      121 gcgagcctgg gttctggtag ttggtgagaa actcctcaaa ttgcttccgt acggcgttct
      181 ctctcgtctc cttcgggatc cctgggctgt ttagggtctt tgaaaagttg atcgcaaggt
      241 ccagatgaag gaccggccgg cttgaccaga caatccagag cttctctttt ccgggatttg
      301 catcgagagt gtagggcccg atccgtaggg gcttgccgct gatgagcgat acgcctttat
      361 tgaccttact gttcggaaaa aggagtgata aagttccctt ctccggttga tcgatcaagt
      421 acaagtgtcc ggtttgggct gaggctacgt taaagctgaa cttccaaccg ctcttgagtg
      481 gatccttgcc gctggacttg aacgctgccc ctccagtggg ctgcacgagt aacgagtatg
      541 tgagctcgcg ctcgcctttg cgagggccga ggtctccgac ctcgccgggc accgggatgt
      601 tgatgtttgg gacgattttg gagagatcca cctggccagc gccagttgcc ggcccggctg
      661 cggtttcagt tccagtttca gctccggctg ctcctccggg tcctgcccca gccgatttgc
      721 gctctgtttt cgaagttgca ggcagggagg gcacagccgg cgccgtgtga accgggatgc
      781 ccgaagactg ggtctcggga gactgccgtt ctttcttctt cactgcccag ccgacaattg
      841 cgattgctgc caaaactgcc accacaagga atgcgatcat ccctgcggcg atcttcttct
      901 tcgggggcgc aggtgcgggt ggagcgggcg tcggcaccgg agcaggtcgc atcccggacc
      961 tctgctgctc ggcctcaact tccatccgct gcttgagtcg tttcaggtcg atgccaagat
     1021 ctttgatcgt ctggtagcgc tcgtcggcgc tcttggccaa tgccttgctg aggatgcgct
     1081 ccagctcttc aggcgcttcg atgcgcagca gccgcaccgc cggcgggtca cgctgcagaa
     1141 cggcgatcat cgtatctgtg ggggtaggct cggtgaacgg cggcttgccc gtgaccattt
     1201 catagagcac cgcgcccagg ctccagacgt cagtgcgcgc atccacctga aggccgcgca
     1261 actgttcggg cgacatataa cccagcgttc ccatgaccac gccaggcata gtcacgtcga
     1321 ctgtgcgatc gccgtagatg ctgtcaggag aggtctgcgt gagcttggcc aggccgaagt
     1381 caagtacctt cacgaatcca tccggccgca ccatgaggtt ttccggcttg atatcgcgat
     1441 gcacgatgcc cgccgcatgg gcggtgctca gcgcggctgc ggcctgaatg ccaatgtcca
     1501 gggcgttcaa cagcgagacc ggatggagaa gcaggtcgcg gaccgtctgg ccttccacga
     1561 actcagtggc gatgaacttc gtcgagtcca catcgccaat gtcatagatc gtcaggatgt
     1621 tgggatggtt caatcctgaa gctgcgcgag cctcctgctc aaagcgacgg acacgctcgg
     1681 gattctgcac cgaatccggc ggcagcacct tgagcgcgac tttgcggccc agacgcgaat
     1741 cctccgccag gtagacgcgc gccattccgc cggcgccgag cagcttcagt actctgtaga
     1801 cgccaatctg agtgccgctt tccatggaag aaactccagt atagcccggc gtgtacggtc
     1861 gcatgagtgt gtagcccagc ttcgggcacc tcacagacgg gtctgcgcgg cacaaaacgt
     1921 ctggaaatga aagtgattcc tgagttgcgg aagtaacaat caacgtgact gcgccatgcc
     1981 ggctggagag aactcggcca caaccggctc catgcggtcg aatgcctcgg caagaatttt
     2041 acgtgaagtg gcgaagcaaa tccgcacgtg accttcagag ccggggccga accatcgcgg
     2101 caagccaggg acgagcgcga ccttcgctcg atctcgcagg tgatcgcaga acgcagccga
     2161 atccgtagtg agcgaccgca cgtctgggaa aatcacatac gttccctgcg ggggcgatgc
     2221 tttcactccc ggccaggcag cgagccgctg gactacgtag tcgctctgtg cctggagatg
     2281 acgaacaaag tctttgagcc agtcacgccc ttgtgtgacc gcggcaatga
//
LOCUS       DASQYP010000271         4090 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_11048, whole genome shotgun sequence.
ACCESSION   DASQYP010000271 DASQYP010000000
VERSION     DASQYP010000271.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 4090)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4090)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4090
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_11048"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            576..1139
                     /locus_tag="VE783_08745"
     CDS             576..1139
                     /locus_tag="VE783_08745"
                     /inference="COORDINATES: protein motif:HMM:NF015944.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LemA family protein"
                     /protein_id="HYX53527.1"
                     /translation="MSLQFGVIFAIIILLAVFLLLTYNRLIAMRNTVRNAWSDIDVQL
                     TRRHDLVPNLVESVKGYMGHERETLEAVTKARAQAVAGSGGASIATRVLAETVLGQAV
                     SNLMVTAERYPELKASDNFLMLQEQLTSTENRIAFARQHYNDSVRRFNTAIAEFPKNL
                     IAGALGFIAEPLFAADASDRAVAQVQV"
     gene            complement(1141..1512)
                     /locus_tag="VE783_08750"
     CDS             complement(1141..1512)
                     /locus_tag="VE783_08750"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53528.1"
                     /translation="MTLAIHAAYLLLLAVTAGLSGTWTGTITTDEGASSPAYLKIVQD
                     GSNISGEVGPSEKSTHPLEDAVLTGSRLAFSTHYTDPDSKEAVTWTFNMTVEGDEMHG
                     KAEGHRGESVWYMTMKVARQK"
     gene            complement(1579..3108)
                     /locus_tag="VE783_08755"
     CDS             complement(1579..3108)
                     /locus_tag="VE783_08755"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HYX53529.1"
                     /translation="MHVDGTRVLLFQCRLALRLASVLVPRVQRADWYNEWYGEVWHWV
                     HFLAETGRLSDPESSARERLKLARHLQGAFADAAWLRFDRNHVLDLVSETPRSPAFCL
                     SMIGVVLLLAIVLTGFAPTLRSGFSTLPYDHPRQLAELSFRRSFARYHESTLFYAVRR
                     WHSDTVQNITAYSWHPVDAVVDGRRVPTIAAGVSPNFFALLGSHAALGRTFGPEEQQQ
                     CERCVVVSHQFWTSQLGGSTRAIGGNIRISGKSYSIIGILPDTFTFLYPDVSLWTLPG
                     NDTNFSERTGAILRLAPGASLADASAELSGRIKGDPSSFGYGSPLVSALESRASQSTR
                     MYLLFTLISLIGGFSLSGGRLAAVSTTRLHLSRNDRLRWWAFFAGKTLLLVVTCFVVA
                     LELSGRISVAFTGGIHPIVGPASTWLFLVTAMVALSWSIHDQSRRCRICLRRLSHEAS
                     VGVPGYSLLDYWGSELVCSDGHGLLYIPELKASWQQFDRWIQLDPSWKPMFEEEAARV
                     S"
     gene            complement(3114..3437)
                     /locus_tag="VE783_08760"
     CDS             complement(3114..3437)
                     /locus_tag="VE783_08760"
                     /inference="COORDINATES: protein motif:HMM:NF015513.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PadR family transcriptional regulator"
                     /protein_id="HYX53530.1"
                     /translation="MEPVRISHTTALILQTIHAGAIYGFDVMEQTGLPSGTVYPALRR
                     LEKDGLIKGSWEDAKAAFRQDRPRRRYYKLTREGKQTLQAALDRYPLLARLAVAETGG
                     RSGKD"
     gene            3563..>4090
                     /locus_tag="VE783_08765"
     CDS             3563..>4090
                     /locus_tag="VE783_08765"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HYX53531.1"
                     /translation="MLEVKQLTKCYASLPAVADVSFSIAPGEILGYLGPNGSGKSTTV
                     KMITGLLEPTRGKVFFRGEDIQRDVTGYKRLLGYVPEEAHLYPYLTGWEYLELVGTLR
                     GMDQLLLRRRAETLLELFSLHAHRHAAIASYSKGMRQRVLLIAALMHDPEILVFDEPL
                     SGLDVTSALVFRKLVR"
BASE COUNT          873 a         1256 c         1197 g          764 t
ORIGIN      
        1 acagagaaaa cccgcccgaa gggaagtcaa gttcaaaagc gcagagctcc agcgcgaagc
       61 gcggaatagc gcaagcccgg ggcgtaagcc ccgggtgagt ggaaacaaga ttcaagcccc
      121 ataggggcgg cacaggaaaa agtttgaagg gcagggccca aagcgttggt tttttgcgat
      181 gatctcaagg ccaagctgat cacgatgcac tctgggtgtg atcctgcgcg gacctgagtc
      241 gctcagggcc ataggcatgt caagtagtta gcccacttcg gagccacgcg tggtttgaat
      301 agataaaaga agggctcccg gctcgcccgg ttttggcgag ctgggacagt gcgcccgctg
      361 gcggagaggt ggggaaggcg gttcaaaaca aaagagccct gtaggggcga cacactcccg
      421 cgcttttggc atgtgcataa ttcaaagcgc tagcgcgaag cgcggcatag cgcaagcccg
      481 ggggcgtaag ccccgggtga gcggaaagaa gattcaagcc ccgtaggggc ggcacagctt
      541 ccctacgcta gaagctgaaa gctcaacgag gaaccatgtc actccaattc ggcgtcatat
      601 tcgcaatcat cattctgctc gcggtcttcc tcctcctgac ctacaaccgt ctgatcgcca
      661 tgcgcaacac ggtccgcaac gcgtggtcag atattgacgt acaactcacc cgccggcatg
      721 accttgtgcc gaacctcgtc gagtcggtga aaggctatat gggtcacgaa cgcgagaccc
      781 tggaagccgt caccaaagcg cgcgctcagg cggttgccgg ttctggcggc gccagcatcg
      841 ccacccgcgt gcttgccgag accgtgctgg gtcaggcggt cagcaatctt atggtgaccg
      901 cggagcgcta ccccgaactg aaggcctcag acaatttcct gatgcttcag gagcagctca
      961 cctcaaccga aaaccgcatc gcctttgccc ggcagcacta caacgactct gtccggcgct
     1021 tcaacaccgc catcgccgaa ttccccaaaa acctgattgc gggggcgctc ggcttcatcg
     1081 ccgaaccgct gttcgcggcc gatgcttcag acagagcggt tgcgcaggtg caggtctgac
     1141 tcacttctgc cgtgcaactt tcatcgtcat ataccagacc gattctcctc gatgtccttc
     1201 ggccttccca tgcatctcat cgccctccac agtcatgttg aaagtccagg tgacagcctc
     1261 tttgctgtcc gggtccgtgt agtgcgtcga gaaagccagt cggctgccag tgagaaccgc
     1321 gtcttctaat ggatgggtgc tcttttctga agggccaacc tcgccggaga tattgcttcc
     1381 gtcctgaaca attttcagat acgccgggct gctggcgcct tcatccgtgg tgatggtgcc
     1441 ggtccaggtg ccgctgagtc cggcggtgac ggccaggagc agcagatagg cggcatgaat
     1501 tgccaaagtc acgaattcct ccagaggcgc ggaggcgcca gagaggatca tacaccccta
     1561 tgtagtaatc agcatagatc aggaaactcg agctgcctct tcttcgaaca tcggcttcca
     1621 tgaaggatcg agctggatcc agcggtcgaa ctgctgccag ctcgccttga gctcgggaat
     1681 atagagcagg ccgtgaccgt ctgagcagac cagctcgctg ccccagtaat cgagcagcga
     1741 ataacccggc acgccaaccg aggcttcatg gctgagccgt cgcaggcata tgcggcagcg
     1801 ccggctctgg tcgtggatgg accatgagag cgcaaccatc gcggtcacca gaaacagcca
     1861 ggtcgatgcg gggccaacga tggggtggat tccgccggtg aatgcaaccg agatccgccc
     1921 gctgagctcc agcgcaacca cgaaacacgt cactacaaga agcaaagtct tgccggcaaa
     1981 gaaggcccac cagcgcaacc tgtcattacg cgaaaggtgc aggcgcgtgg tgctcaccgc
     2041 agccaatcgg cctccggaca gtgaaaagcc gccaatcagc gagatcaacg tgaacagcag
     2101 gtacatcctt gtgctttgac tggcgcgcga ttccagcgcg ctcaccagcg gactgccgta
     2161 cccgaaagaa gatggatcac ctttgatcct gccgctcagc tccgcggagg catcggccag
     2221 tgaggcccca ggcgcgagcc gcagaatcgc tcctgtacgc tcggagaaat tcgtgtcgtt
     2281 acccggcaat gtccacagag agacgtcagg gtagaggaac gtaaacgtat cgggcagaat
     2341 gccgatgatg ctgtagctct tgccggatat cctgatgttg ccgccgatcg cacgagtgct
     2401 cccgccaagc tgcgaagtcc agaactggtg cgacactacc acgcagcgct cacactgctg
     2461 ctgctcttcc ggcccaaaag tgcggcccag cgcggcatgg ctgcccagca gcgcaaagaa
     2521 atttggcgaa acgccggccg cgatcgtcgg aacccttctg ccatccacaa ccgcatcaac
     2581 ggggtgccag gaatatgccg ttatgttctg aactgtgtcg ctgtgccagc gcctcaccgc
     2641 ataaaacaac gtgctctcgt gataccgggc aaagctgcgc cggaaagaaa gttccgcgag
     2701 ctgtcgcgga tgatcgtacg gcagagtcga gaagcccgag cgcagcgtgg gggcaaatcc
     2761 ggtgagcacg atcgccagca gaaggaccac gccgatcatc gacaggcaga atgctggact
     2821 gcgcggcgtt tccgacacaa gatcaagcac gtgattgcga tcaaagcgca gccatgctgc
     2881 gtcggcgaac gctccctgaa ggtggcgggc cagtttcagc cgctcacgcg cgctgctttc
     2941 cgggtcggaa agcctgcccg tctcggcgag gaagtggacc cagtgccaaa cctcgccata
     3001 ccactcgttg taccagtccg cgcgctgcac ccgcggaacc agcacgctcg ccaggcgcag
     3061 cgccagcctg cactggaaca gcagaacgcg cgtgccatca acgtgcataa gcttcagtct
     3121 ttccctgaac ggccgcctgt ttcggccacg gccaggcggg ccagtaaagg ataccgatcc
     3181 agagcggcct ggagcgtctg ctttccttcc ctggtgagtt tgtaatagcg gcggcgcggc
     3241 cggtcctggc gaaatgcggc ttttgcgtcc tcccagctcc ctttgatcag gccgtctttt
     3301 tccaggcggc gcagcgccgg atacacggtg ccgctgggca gtccggtctg ctccatcacg
     3361 tcaaagccgt agatcgctcc ggcgtggatc gtctgcagga tcagagctgt tgtatgcgag
     3421 atgcggaccg gctccatgga caatacccta tgtagtattc tattctcctg aagtcaaggc
     3481 tatgtagaaa tttatatagc ctagatggaa acctgcggcc agctgccggt gtcttgtgaa
     3541 agatagcgct ttgggaggtc gtatgcttga ggtaaaacag ctcaccaaat gctatgccag
     3601 cctgcccgct gtggctgacg taagcttcag cattgccccg ggcgagatcc tcggctatct
     3661 cgggcccaac ggctccggca aaagcaccac cgtcaagatg atcaccgggc tgctggagcc
     3721 gacgcgcggc aaggtcttct tccgcggcga agacatccag cgtgacgtca ccggttacaa
     3781 gcgcctgctc ggttacgtcc ccgaagaggc gcacctgtat ccctatctca ctggctggga
     3841 gtatctggaa ctggtgggta cattgcgcgg catggaccaa ctcctgctcc gtcgccgcgc
     3901 ggaaacgctg ctggaattgt tcagcctgca cgctcaccgt catgccgcga tcgcctccta
     3961 ctccaaaggc atgcgccagc gtgtgcttct gattgccgct ctcatgcacg atccggaaat
     4021 ccttgtcttc gatgaaccgc tctccggcct cgacgtcacc tcggcgctgg tcttccgcaa
     4081 gctggttcgc
//
LOCUS       DASQYP010000272         5743 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_11189, whole genome shotgun sequence.
ACCESSION   DASQYP010000272 DASQYP010000000
VERSION     DASQYP010000272.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 5743)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5743)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5743
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_11189"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..833
                     /locus_tag="VE783_08770"
     CDS             <1..833
                     /locus_tag="VE783_08770"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HYX53532.1"
                     /translation="NAVSTGYFRTTGMRILSGRDIAESDTAASEHVAVINEAMAHKYW
                     PAQDPLEHEFSIPEDPKHPIRIIGVVRNSHMIDAYSPIEPMYFAPLAQRYLPTLTLQV
                     KSSRPTAELARQIESIVEELAPAMPVYGVRTMTQALDSLNGLFMFRVGAVLTGALGSL
                     GLILAIIGVYGVMSYSVSQRTSEIGVRIALGAQKYQILALLSRQVIAVIASGLVLGIL
                     ITLAASKVVQEFLIDVSPTDALTYGGLSAALGLAAFVAMYVPARRAARIDPVVALRRE
                     "
     gene            complement(857..1069)
                     /locus_tag="VE783_08775"
     CDS             complement(857..1069)
                     /locus_tag="VE783_08775"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53533.1"
                     /translation="MRADRVEVSWDNQKSKWLVRIQSGEEVIRRHCDLARNADEAALK
                     QAAETTLKDEGYETDSTPISVQKAAS"
     gene            complement(1120..1815)
                     /locus_tag="VE783_08780"
     CDS             complement(1120..1815)
                     /locus_tag="VE783_08780"
                     /inference="COORDINATES: protein motif:HMM:TIGR02428.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase subunit B"
                     /protein_id="HYX53534.1"
                     /translation="MATTPVDKQQKQKDVEKRERIVKRIALDLKDGYYVNLGIGMPTL
                     VANYVPQGIEVVLQSENGMLGVGPFPLEGEEDPDLINAGKETVTEVPGTAYFSSADSF
                     AMIRGGHIDFSVLGAMEVDEEGNLANWMIPGKVVKGMGGAMDLVAGARRTVIAMEHTT
                     REGAPKILKKCTLPLTGMKVVDTIVTEMAYMRVTPQGLVLEEIAPGLTPEQVQKATEA
                     RLIISPNLKTMPS"
     gene            complement(1818..2351)
                     /locus_tag="VE783_08785"
     CDS             complement(1818..2351)
                     /locus_tag="VE783_08785"
                     /inference="COORDINATES: protein motif:HMM:NF015438.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MOSC domain-containing protein"
                     /protein_id="HYX53535.1"
                     /translation="MSMNCAELEHGIAVQTDELKKLGARWGVVAAIHIGETRLQPMRL
                     VPEVKAIAGAGIEGDRYCSERGTFSKKSPTNQLTLIEAEALEAAERDYGLQVSAAESR
                     RNILTCGIALNHLVGREFSIGEVRLRGLKLCEPCSHLKKLTAKEVIKALKHRGGLRAE
                     ILHGGTIKTGDVIREES"
     gene            complement(2348..3046)
                     /locus_tag="VE783_08790"
     CDS             complement(2348..3046)
                     /locus_tag="VE783_08790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011553803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008410 - CoA-transferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase subunit A"
                     /protein_id="HYX53536.1"
                     /translation="MNKVVANADEAVRDVQDGAVIMVGGFGLCGIPADLIDALVRKGV
                     KNLTTISNNAGVDEYGLGKLLQTGQIRKHIGSYVGENKAFERMVLEGKLELELNPQGT
                     LAERIRAGGAGIPAFFTPTGAGTLVGEGKEVREFNGRPHILEKALKADFALVRAWKAD
                     RWGNLVFRKTARNFNPVMATAARITIAEVEELVEPGQLDPDRVHVPSVYVKRVFVTAM
                     KDKRIEKHTVRKRA"
     gene            complement(3090..4544)
                     /locus_tag="VE783_08795"
     CDS             complement(3090..4544)
                     /locus_tag="VE783_08795"
                     /inference="COORDINATES: protein motif:HMM:NF018525.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004665 - prephenate dehydrogenase (NADP+)
                     activity [Evidence IEA];
                     GO_function: GO:0008977 - prephenate dehydrogenase (NAD+)
                     activity [Evidence IEA];
                     GO_function: GO:0070403 - NAD+ binding [Evidence IEA];
                     GO_process: GO:0006571 - tyrosine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prephenate dehydrogenase/arogenate dehydrogenase
                     family protein"
                     /protein_id="HYX53537.1"
                     /translation="MGVVCLYPQMGKSSSSNMPFKQITIIGTGLIGGSFGMAVKAAGF
                     TGKIIGCDRQPVLDRARAMRAIDIGSEDPVEAVQNSDLVVLATPVGGIIDCIERIGPL
                     VSPNALITDVGSTKQEILDRAKSVFGAMATRRFLGGHPMAGKERGGLEHAESKLFLNA
                     VWLLVGQPGQDMETGRLREFRGLLESIGARVMKMEPERHDELCAWISHVPQMVSTAFA
                     GALVDQFGDSPDLHAIGGRALREMTRIAASPYSMWRDIAYTNAANIENALQRLEQRIA
                     HVRENLRTPELREEFERANHFGLGLTEVAATVLVLPGWHNSGPRHWQTLWEQQSPIFL
                     RVQQRDWETPHKSWWLERISEEVKQAPAPIVFAAHSLGCIAVAHWAEKAPELVGKIKG
                     ALMVAPADIERKDSPPQLRDFVPIPTKLLPFPSIVVASNNDPFLTTTRAREMARLWGS
                     RFVDAGAAGHINGDSGVGDWPEGKRLLRLLLEGE"
     gene            complement(4585..5604)
                     /gene="aroF"
                     /locus_tag="VE783_08800"
     CDS             complement(4585..5604)
                     /gene="aroF"
                     /locus_tag="VE783_08800"
                     /EC_number="2.5.1.54"
                     /inference="COORDINATES: protein motif:HMM:NF006421.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003849 - 3-deoxy-7-phosphoheptulonate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0009423 - chorismate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-7-phosphoheptulonate synthase"
                     /protein_id="HYX53538.1"
                     /translation="MIVAMQELASEEQIQKVIERLIEMGFEVHRSTGARQTVLGAVGA
                     RREFDIRDVEVLPGVGEVHRISSPYKLVARSFRPEGTIVRFPNGVNVGGDEVVIMAGT
                     CSVESREQLFAVAESVARSGAKFLRGGAFKPRSSPYTFQGLGEEGLKLLREAADKFGM
                     LVVSEIMEISQIPLMMPYVDLFQVGARNMQNFNLLRELGKVRKPVLLKRGIAATIEEL
                     LLSAEYLLAGGNYEVVLCERGIRTFETYTRNTMDISAIPIVKKLSHLPMLADPSHGTG
                     RREKVSPMGRAAVAAGADGLLIEVHNCPDKALSDGAQSLYPEQFAQLMGQLRVIAPAV
                     GRRLT"
BASE COUNT         1098 a         1891 c         1502 g         1252 t
ORIGIN      
        1 tcaacgcagt aagcactggc tactttcgca cgactggaat gcgtattctg agcggccgcg
       61 acatcgccga gagcgatacc gcagccagcg agcacgtggc cgtcatcaat gaagccatgg
      121 cgcacaaata ttggccagcg caggacccgc tcgagcacga gttttccatt cctgaagatc
      181 cgaagcatcc cattcgcatt atcggcgtag tcaggaacag ccacatgatc gatgcttaca
      241 gcccaatcga gccaatgtac tttgctcctt tggctcagcg ttatctaccc actctgacct
      301 tgcaggtaaa aagttcgcgc ccaacggcgg aactcgcaag gcagattgaa agcattgtgg
      361 aagagcttgc accggcaatg cccgtgtacg gcgtgcgaac catgactcag gccctggaca
      421 gcctcaacgg tcttttcatg ttccgcgtgg gcgcagtgct caccggagct ttaggatcgc
      481 tgggcctgat actggccatc atcggcgtgt atggagtgat gtcatactcg gtaagccagc
      541 ggaccagtga aatcggcgtg cggatcgcgc tgggagcgca aaaatatcag atactggctc
      601 tgctctcccg gcaggtcatt gccgtgatag ccagcggact cgtactggga atactgatta
      661 cacttgctgc cagcaaggtg gtgcaggagt tcctgattga cgtaagcccc accgacgctc
      721 ttacctacgg tgggctgtcc gcagctcttg gacttgctgc gtttgtggcg atgtatgtac
      781 cggcccgccg ggccgcgcgc atcgatcctg tcgtggcgct ccgtcgggaa tagtcgaaat
      841 tatggaagct gccgatctac gacgccgcct tttgcacgct gatgggcgtc gaatcggtct
      901 catagccttc atctttcagc gttgtttccg cagcttgctt cagggcagct tcgtcagcat
      961 ttctggcaag atcgcaatgg cgccggatca cctcttcacc gctctggatc cgcaccagcc
     1021 atttcgactt ctggttgtcc cacgagactt ctacgcgatc agcacgcatg actttcctcc
     1081 cagcagccac tcccagcgcc cgctcacgaa agcatgcagc taggaaggca tggtcttcaa
     1141 attcggactg ataattagac gcgcttctgt ggccttctgc acctgctccg gcgtcaatcc
     1201 gggtgcgatt tcttcaagca caagcccttg cggggtcacc cgcatgtagg ccatctcggt
     1261 cacaatggtg tccactactt tcattccggt cagcggaaga gtgcattttt tcaggatctt
     1321 gggtgcgcct tctctcgtcg tgtgctccat ggcgatgaca gttcgccgag cgcccgccac
     1381 cagatccatg gcgccgccca tccctttcac cactttgcct ggaatcatcc agttggccag
     1441 attgccttct tcatccactt ccatggcgcc cagcacgctg aaatcaatgt ggccgccacg
     1501 gatcatagca aacgaatccg cgctggaaaa atatgctgtc cccggtacct cggtcaccgt
     1561 ttccttgccg gcgttgatca ggtcagggtc ttcttcacct tcgagtggaa acgggcccac
     1621 gccgagcatg ccgttctcgc tctgcagtac cacttcgatc ccctgcggca cgtaattggc
     1681 taccagagtc ggcatgccga tgcccaggtt tacgtagtag ccatccttca ggtccagcgc
     1741 aatgcgcttc acaatgcgct cgcgcttctc cacgtccttc tgcttttgct gtttgtccac
     1801 gggtgtggtc gccatagcta actctcttcc ctgatcacgt cgccggtttt gattgttccg
     1861 ccgtgcaaga tttccgcccg cagcccgccg cgatgtttga gcgctttgat tacttccttt
     1921 gcggttagct tcttcaggtg gctgcagggt tcgcacagct tcaggccgcg cagccggacc
     1981 tcgccaatgg aaaattcgcg gcccacaagg tgattcagcg caatcccgca ggtcaggata
     2041 ttgcgtcgcg actctgccgc ggaaacctgc aaaccgtaat cgcgctctgc ggcttccagc
     2101 gcttccgctt cgatcaatgt cagctggtta gtcggcgatt tttttgaaaa cgtgccgcgc
     2161 tcgctgcaat agcggtcgcc ctcaatcccc gctcctgcga tcgcttttac ttcaggcacc
     2221 agccgcatcg gctgcaagcg cgtctcacca atgtgaattg ccgccaccac gccccagcgc
     2281 gcgcccaact tcttcaactc gtcggtttgc accgcaatgc catgctcgag ttcggcgcag
     2341 ttcatgctca tgcccgcttc ctcaccgtgt gcttctcaat gcgtttgtcc ttcatcgcgg
     2401 tcacaaatac gcgcttcacg taaacacttg gaacgtgaac gcggtcagga tcgagctgcc
     2461 caggctccac cagttcttcc acctcggcaa ttgtgatgcg cgctgcggtg gccataacgg
     2521 ggttgaaatt gcgcgccgtc ttgcgaaata ccaggttgcc ccagcgatca gccttccacg
     2581 ccctcaccag cgcaaaatct gccttcaacg ccttttccag aatatgcgga cgcccgttga
     2641 attcacgtac ctctttgcct tctcccacca gcgtccccgc gcccgtagga gtaaagaagg
     2701 caggaattcc cgcgccaccc gcacgaattc tctccgccag cgtgccctga gggtttagtt
     2761 caagctcaag cttgccttcc agcaccatcc gctcaaaggc cttgttctcg cccacgtaag
     2821 atccaatgtg cttgcggatt tggccggtct gcagcagctt gcccagccca tattcgtcta
     2881 cgcctgcgtt gttggaaata gtggtcaggt tctttacgcc ctttcgaaca agagcatcaa
     2941 tcaggtcggc cggaatgccg cacaacccga agccgcccac catgattaca gcgccgtcct
     3001 gcacatcgcg gacagcctca tcagcgttcg ccaccacttt attcataaac aaacgattct
     3061 aatcaccgca gcagggcgct gcaacggact cactcccctt ccagcagcag cctgagcagt
     3121 cgcttccctt ccggccaatc gcctacgccg gagtccccat tgatatgtcc agccgctccg
     3181 gcatccacaa atcggcttcc ccaaagccgc gccatctcgc gcgcacgggt tgtggtcagg
     3241 aaaggatcgt tattgctggc gaccacaatg gaaggaaatg gcagcagctt ggtcgggatg
     3301 ggaacaaaat cccggagctg tggcggcgaa tccttgcgct cgatatcggc cggagccacc
     3361 ataagcgcgc ctttgatttt ccccaccagc tctggcgcct tctccgccca gtgcgccacc
     3421 gcgatgcagc ccaggctatg cgctgcgaac acaatcggcg ccggcgcctg cttcacttcc
     3481 tcgctgattc gctccagcca ccaggactta tgcggagtct cccagtcgcg ctgctgcact
     3541 cgcagaaaga tcgggctctg ctgctcccag agcgtctgcc agtgtcgcgg acctgagttg
     3601 tgccagcccg gcagtaccag aacggttgcc gcaacttccg tcagtcccag cccaaaatgg
     3661 ttggcgcgct caaactcctc acgcagttcc ggcgtgcgca agttttctcg gacatgtgca
     3721 atcctctgct ccagccgctg cagggcattc tcgatgttgg cggcgttggt gtaagcgata
     3781 tcgcgccaca tggaataagg acttgccgca atgcgcgtca tctccctcag cgctcttccg
     3841 ccaatcgcgt gaaggtcggg gctatctccg aactggtcca ccaaagcccc ggcaaaggca
     3901 gtggacacca tctgcggcac gtggctgatc caggcgcaaa gctcgtcgtg ccgctcgggt
     3961 tccatcttca tcacgcgcgc gccaatgctt tccaataaac cgcggaattc tctcagtcgc
     4021 cccgtttcca tgtcctgccc cggctgcccc accaacagcc acaccgcatt caagaacaac
     4081 ttcgattccg cgtgctccag cccgccgcgc tccttgcctg ccatggggtg tcctcccagg
     4141 aacctgcgcg ttgccatcgc tccaaagact gatttggcgc ggtccagaat ttcctgcttc
     4201 gtgctgccca catccgtgat cagcgcgtta ggtgaaacca gcggcccaat gcgctctatg
     4261 caatcgataa tcccgcccac cggcgttgcc aggaccacca ggtcgctgtt ctgcacggcc
     4321 tcgaccgggt cttcgctgcc gatatcaatg gcgcgcatgg cgcgtgcccg gtcgagtact
     4381 ggctgtcgat cacagccaat gattttgccc gtgaatccgg ccgccttcac cgccatgcca
     4441 aacgatccgc cgatcaggcc ggtgccgata attgtgatct gcttgaaagg catattcgag
     4501 gaagatgatt ttcccatctg cgggtacaga cagactactc ccattgccgc gatcgtgcat
     4561 gcttgcttcc gtgaagctac cgcattacgt cagtctgcgc cccaccgcgg gagcgatcac
     4621 gcgcagctgg cccatcaact gtgcaaactg ttcaggatag agagactgtg cgccgtcaga
     4681 aagcgccttg tcggggcagt tatggacttc gatcagcagt ccgtccgcgc ccgccgccac
     4741 cgcagcgcgc cccatgggag acaccttctc gcggcggccc gtgccatgcg aaggatcggc
     4801 cagcatggga agatgcgaga gcttcttcac gatcggtatg gcggaaatgt ccatggtgtt
     4861 gcgagtgtaa gtttcaaagg tgcggatgcc gcgttcgcac agcacaacct cgtagttccc
     4921 gccggccagc aaatattctg ccgagagcag caactcttca atggtggccg cgatgccacg
     4981 cttcagcagc accggcttgc ggactttacc cagttcgcgc agcaggttga agttctgcat
     5041 gttgcgcgcg ccaacctgga agaggtctac ataaggcatc atcagcggga tctgcgagat
     5101 ctccatgatc tcgctcacca ccagcatgcc gaacttgtcc gccgcttcgc gcagcagctt
     5161 gagcccttct tcacccagcc cctgaaacgt gtacggcgag ctgcgcggct tgaatgctcc
     5221 gccacgcagg aactttgctc cggagcgcgc caccgattcc gccacggcaa agagctgctc
     5281 ccgcgattcc accgagcacg tgccggccat gatcaccact tcatcgccgc caacgttgac
     5341 tccgttggga aaacgaacga tcgttccttc cggtcgaaaa cttcgggcaa ccagcttgta
     5401 aggcgagctg atgcgatgca cctcgcccac gccgggcagc acctccacgt cgcggatgtc
     5461 gaactcgcgg cgggcgccca ccgctcccag cacggtctgg cgcgcaccgg tggaccggtg
     5521 cacttcaaat cccatttcaa tcaggcgctc gatcactttc tgtatctgct cttcgctcgc
     5581 cagttcctgc attgctacga tcattgtttt ctgtcgctcc gctccaaacc gctcaagagt
     5641 tgcttttgtc agcaacgcgc ggcacctacc gcaggcagct cgccgcgcaa gtcgggctcg
     5701 ctgctgagat gtaatgacga cggcccgatc accggatcac ccg
//
LOCUS       DASQYP010000273         6453 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_79370, whole genome shotgun sequence.
ACCESSION   DASQYP010000273 DASQYP010000000
VERSION     DASQYP010000273.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 6453)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6453)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6453
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_79370"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            175..543
                     /locus_tag="VE783_08805"
     CDS             175..543
                     /locus_tag="VE783_08805"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53539.1"
                     /translation="MLDKQGHIQQAKHNEALAQYLEGAPYPDWRSTAYFYAALHYVQA
                     YFVSRTPPQNFKKHSDRDTAIESDGRIGGIWSDYRSLKDWSQNARYIGRKPSDAEIKN
                     DILKSLAAIKKEISRHVPID"
     gene            1139..2851
                     /locus_tag="VE783_08810"
     CDS             1139..2851
                     /locus_tag="VE783_08810"
                     /inference="COORDINATES: protein motif:HMM:NF013259.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53540.1"
                     /translation="MSAQGPAVKETKAQRAERLKLEKNPWECLEEIRSFSRQGLAAVP
                     DAWIKTYFRWWGVYTQGDGAGVLGGANGEGKAVPYFMLRIRLSNGFLTARQLRTIADL
                     SERYARGSADVTVRQNIQLHWVSIENLADVLEKLFDVGLTSMATCGDVPRNVTGCPLA
                     GVDASELVDASPLVFQITQMLVGNPEFYNLPRKYKISISGCRDWCCYPEINDLAFTAA
                     VREHNGEREVGFSIRVGGGLSADPHLAVRLNAFVRWDQVIPVTRTVSEIFRDADPLRE
                     NRERARLKFLFLHHGWTAERFQQEIENRLGYKLDPAVPEHRPSDLFRDHAGIHAQKQE
                     GLFYVGASVLRGRLTPEQMRIAADLAERFGSGELRTTAAQNLVLVDVKQQHLESVVQG
                     LTAAGLPVQASPFWRGAVACTGTEFCKLAITETKSFTRWLVEELEERVPQFDQQLKIN
                     VTGCPNSCGQHRIADIGLEGKKIKIDGHMKDAYYFCLGGAVGEHAGFARPVGYRCAAS
                     EVPDAIARLLEGYLEFRLRGENLRRFFARHSEEQLRGFLAGEILPSVPRDPAPGRVPH
                     GLEG"
     gene            2920..3507
                     /locus_tag="VE783_08815"
     CDS             2920..3507
                     /locus_tag="VE783_08815"
                     /inference="COORDINATES: protein motif:HMM:TIGR01470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional precorrin-2
                     dehydrogenase/sirohydrochlorin ferrochelatase"
                     /protein_id="HYX53541.1"
                     /translation="MPLYPVFLKLEDRKVLVVGGGAIAEQKIEGVLRSATDVTVLGPE
                     ISDRIREWAEEGRLKLHIQEYQPGMATGYFLVIAATDNNGVNRAVYEEARSAGALANA
                     VDDPPYCDFYAPALVSRGDFQIAISTGGQSPALAHQVRIRLEQEYGPEYAGWTDWLGR
                     MRAGIRQALPPTEHRRQLLHLLAMSVTCTREPRRG"
     gene            3507..3680
                     /locus_tag="VE783_08820"
     CDS             3507..3680
                     /locus_tag="VE783_08820"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53542.1"
                     /translation="MESLQRTELEKRLRAALREHQHEGLHMVGGVDQLIPLLLAAVEE
                     WLQEGTKVFKKTA"
     gene            3688..4470
                     /gene="cobA"
                     /locus_tag="VE783_08825"
     CDS             3688..4470
                     /gene="cobA"
                     /locus_tag="VE783_08825"
                     /EC_number="2.1.1.107"
                     /inference="COORDINATES: protein motif:HMM:NF004790.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004851 - uroporphyrin-III
                     C-methyltransferase activity [Evidence IEA];
                     GO_process: GO:0019354 - siroheme biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen-III C-methyltransferase"
                     /protein_id="HYX53543.1"
                     /translation="MAGKVYFVGAGPGSADLLTLRAVAVLRAADVVLHDDLVTPEVLA
                     LSASTSERVNVGKRYGRKDGSPTQESINHLIVWHASNGSVVVRLKSGDPAIYGRLGEE
                     LDAVRRAGIDFEIVPGISALTAAAASAEVTLTDRRAASSLVILTAHNCRGEEFRARGL
                     DPQTATFAVYMPGPDYARTSRDLLASGVDGNTPCVLVSNAGRSTSESCFMTVSDLPFV
                     IGVPAPAILIVGEVARGAEMFEAYQPPAIDGTSVTSSPSANW"
     gene            complement(4413..4685)
                     /locus_tag="VE783_08830"
     CDS             complement(4413..4685)
                     /locus_tag="VE783_08830"
                     /inference="COORDINATES: protein motif:HMM:NF014636.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MoaD/ThiS family protein"
                     /protein_id="HYX53544.1"
                     /translation="MNVTVSIPSAFRRHTEGIERYEASAQNVNDLLDSLGSRFPELKP
                     HLRDENGQVRRFLNIYVNDEDIRFLDKNYQFAEGDEVTLVPSIAGG"
     gene            complement(4682..5950)
                     /gene="thrC"
                     /locus_tag="VE783_08835"
     CDS             complement(4682..5950)
                     /gene="thrC"
                     /locus_tag="VE783_08835"
                     /EC_number="4.2.3.1"
                     /inference="COORDINATES: protein motif:HMM:TIGR00260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004795 - threonine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0009088 - threonine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="threonine synthase"
                     /protein_id="HYX53545.1"
                     /translation="MSTNPGYELRCRECGTTWGNQPISFCQSCFAPLEVAYDWERIRP
                     TISREAISRRATNLWRYKELLPLPENFEATLPVGFTPLVKASNLGDTFRTRSLYIKND
                     AVCFPTLSFKDRVVAVALAQARNFNFEVVSCSSTGNLANAVAAQAARGGFKACVFIPS
                     DLETAKILGTEVYGAKIVRIAGNYDHVNRLCSQIADKHRWGFVNVNLRPYYAEGSKTV
                     GYEIAEQLGWRLPDNVVVPMAGGSLITKIAKAFKELVTLGLVEAKQVKFFGAQATGCS
                     PISSAVKAGRREIEPQKPSTIARSLAIGNPADGFYATQLISGSGGWAEDASDPEIVDG
                     IALLAESEGVFTETAGGVTVASARKLYEQGRISRDETTVLCITGNGLKTTDALASRFK
                     ASEAIAPKLAAFEEYLERELVGVETAGGAR"
     gene            6267..>6453
                     /locus_tag="VE783_08840"
     CDS             6267..>6453
                     /locus_tag="VE783_08840"
                     /inference="COORDINATES: protein motif:HMM:NF015168.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF255 domain-containing protein"
                     /protein_id="HYX53546.1"
                     /translation="MSDHPQNRLAQAASSYLRSAMHQPIDWHEWGPEPFEKAKQQNKP
                     VLLDIGAVWCHWCHVMDR"
BASE COUNT         1354 a         1848 c         1893 g         1358 t
ORIGIN      
        1 tggactgtag tggattcctt tgagcgtgaa atccgtgacc gtatttactc agtcgagaga
       61 aatctgtttt cgtacttccc ggatcacaaa tttgatttca acgtaatcga gggagacgtc
      121 accaccgtcg tatcagacgc aaagctggtt cactccaaag tgtaagaggc cctattgctc
      181 gacaaacagg gtcacatcca acaagccaaa cacaatgaag ctttagcaca gtatctggag
      241 ggagccccct atccggactg gcgctcgact gcttatttct acgcagcact tcattacgtt
      301 caagcgtact tcgtcagtcg cacgcctccg cagaatttta aaaagcattc tgaccgtgat
      361 acggcaattg aaagcgatgg ccgtatcggc ggcatctggt ccgactaccg gagcctcaaa
      421 gactggagcc aaaatgcgag atacatcggg cgaaagccgt ctgatgccga aatcaagaac
      481 gacatcctga aaagtcttgc tgcaattaag aaagagatca gcagacacgt tccgattgat
      541 tgagcggttc ccccaagtca cactgtagcg gctgttgtag cgagtccccg gttcggcggc
      601 ttgtttggga ttgcacgtcc cgcctgcaaa tggctgagtt tctaacgagc acaaaaccga
      661 tgccaaatgg cacaaacgtt gttcatcagg tctgcaaaac ctttatgcgt cggttcgatt
      721 ccgacccgcg cctccaacat ttctgttgct ttgctccaac ccgcaatcat tttttacttc
      781 tttaaccgat acgtgcttcc cgttgtgctc ctcccggcgc gtgccacccg gcgtcgcccc
      841 aataattctg aatcgttttc tatcgttgca ccctccaatt tgccagtcga gccggtcgtc
      901 agctcttgct tgacactctg ataccggaga tttaaggtag gaacccatgc aggccatctg
      961 ccagaacatg tgtatgtgtt gttgtatcgg gcactccgtg tctctggctg gggaagctgc
     1021 tacctaaagc gcatttattc aacttttagg cagggcccat cgccagcggc gatgggcctt
     1081 ttgctttttg ggcagaaagt ctgatctggg caccaaggtc gaaaggaaag ggcagcacat
     1141 gagcgcacag ggacctgcag taaaagaaac caaggctcag cgagctgaga ggctgaagct
     1201 ggaaaagaac ccctgggaat gcctggaaga gatccgctca ttttcgcggc agggacttgc
     1261 ggccgtgccg gatgcgtgga tcaagactta cttccgctgg tggggcgtgt acacccaggg
     1321 cgacggagcc ggagtcctgg gcggcgccaa cggagaaggc aaggcagtcc cgtatttcat
     1381 gttgcgcatc cggctctcca atggatttct cactgcgcgc cagctgcgca ccattgccga
     1441 tctctctgag cgctatgcgc gcggctctgc tgacgtcacg gtgcgccaga acatccagct
     1501 gcactgggtc tccatcgaga acctcgccga tgttttggaa aagctattcg acgtcggtct
     1561 cacctccatg gccacctgcg gcgacgtgcc tcgcaacgtc accggatgcc ctctggccgg
     1621 ggtcgacgcc agcgaactgg ttgacgcttc accgctggtg tttcagatta cgcaaatgct
     1681 ggttggcaat cctgagtttt acaacctgcc gcgcaagtac aagatcagca tcagcggctg
     1741 ccgcgactgg tgctgctatc ccgagatcaa tgatcttgcc ttcaccgcgg cggtacgcga
     1801 gcacaacggc gaaagggaag tcggattttc aattagagtg ggcggcggtc tctctgccga
     1861 cccgcatctc gccgtccggc tgaacgcatt tgttcgctgg gaccaggtaa tccccgtcac
     1921 caggacagtg agtgaaatct tccgcgacgc cgatcccctg cgcgaaaacc gcgaacgggc
     1981 gcggctgaaa ttcctttttc tccaccatgg atggacggcc gaacgtttcc agcaggaaat
     2041 agaaaaccgt ctcggataca agctggatcc tgccgtgccg gagcatcgcc cctctgatct
     2101 ttttcgtgat cacgccggaa tccacgcgca gaagcaagaa ggtctctttt atgtaggcgc
     2161 ttcagtctta cgtggccgtc tcacgccgga gcagatgcgc attgctgctg atctggcgga
     2221 gcgctttggc agcggcgaac ttcggactac agccgcacaa aacctggtac tggtagatgt
     2281 gaagcagcag cacctggaaa gcgtggtgca gggcctcacc gccgccggac ttcccgtgca
     2341 ggcgtcgcct ttctggcgcg gcgccgttgc atgcaccgga accgaattct gcaagttggc
     2401 catcacggaa accaaatcat ttacccgctg gctggtggaa gagctggagg agcgggtacc
     2461 tcagttcgac cagcagttaa agatcaacgt cactggatgc ccgaacagct gcgggcagca
     2521 ccggatcgcc gacatcgggc tcgaaggaaa gaagatcaag attgacggcc acatgaagga
     2581 cgcttattac ttctgcctcg gcggagcagt aggcgagcat gccggctttg cccgaccagt
     2641 gggctatcgc tgtgccgcct cggaagtgcc ggacgcgatt gcccggctgc ttgaagggta
     2701 tctggaattt cgtttacgcg gtgagaacct gcggcgattt ttcgcgcggc acagcgaaga
     2761 acagcttcgc ggctttttgg ccggagagat cctgccgtcc gttccgcgcg atccggctcc
     2821 gggccgtgtg ccccatgggt tagaggggtg aagcgttaga agggtgaagc gttagaaggg
     2881 tgaagcgtta gaaggataaa gcctggaagg gtaaagctta tgccactcta tcccgtgttt
     2941 ctgaagctcg aagaccgcaa ggtgctagtg gtcggcggcg gggccatcgc ggaacagaag
     3001 atcgaaggcg tgctgcgctc cgccacggat gtaaccgtgc tcggcccgga gatctctgac
     3061 cgaatccgcg agtgggccga agagggccgg ctgaagctcc atattcagga gtatcagccg
     3121 ggcatggcaa cgggctattt ccttgtgatc gccgctacag acaacaatgg ggtaaaccgg
     3181 gcagtgtatg aggaagcaag gtctgcgggc gccctggcga atgccgtgga cgatccgccg
     3241 tattgcgact tttacgcccc ggcactggtc agtcgtggag attttcagat tgccatctcc
     3301 accggcggcc aaagtccggc tctggcccat caggtgcgta tccggctgga gcaggagtac
     3361 gggccggagt atgccggctg gactgactgg ctgggtcgca tgcgagcagg catacgccag
     3421 gctttgccgc caaccgaaca tcgcaggcag ctgttacacc tgcttgcaat gtcagtgacc
     3481 tgcacgagag aaccgaggag gggatgatgg aaagcttgca acggactgaa ctggaaaaac
     3541 ggctgagagc ggcattgaga gaacaccagc acgaaggcct gcacatggtg ggcggcgtgg
     3601 accagctcat tccgcttctg cttgccgccg tggaagagtg gctccaggaa ggcacaaagg
     3661 tgttcaagaa gaccgcgtaa aacctgaatg gctgggaaag tctatttcgt gggcgcaggg
     3721 cccgggtcgg cagacctgct cactctgcgg gctgtggccg tgcttcgtgc ggcggacgtg
     3781 gtgctgcatg acgacctcgt caccccggaa gtgctggcgc tttctgcctc gacctccgaa
     3841 cgcgtcaatg tcggcaagcg ttacggccgc aaggatggca gtcccactca ggagagcatc
     3901 aatcatctca tcgtgtggca cgcctccaat ggttccgtgg tggtgaggct caagtcaggc
     3961 gatcctgcca tctatggccg gctcggtgag gagcttgacg cggtgcgacg ggcaggaatt
     4021 gattttgaga tcgtgcctgg aatcagcgcg cttacggcag cagcagcctc agccgaggtc
     4081 acgcttacag accggagagc ggcatcgtcg ctggtgatcc ttaccgccca caactgccgc
     4141 ggcgaagaat ttcgggcgcg ggggcttgat ccgcaaaccg ccaccttcgc tgtctacatg
     4201 ccggggccgg attacgcccg cacgtcccgc gacctgctgg cgtcaggcgt agatggaaac
     4261 acgccctgcg ttctggtcag caatgccgga cgcagcacca gtgaaagctg ctttatgacc
     4321 gtgagtgatc tgccattcgt gatcggagtg cccgccccgg caatcctgat tgtgggcgag
     4381 gtcgcccggg gcgctgagat gttcgaggcc tatcagcccc ccgcaataga cggaaccagc
     4441 gtgacttcat ccccttccgc aaactggtag ttcttgtcca ggaaccggat atcttcatca
     4501 ttcacataaa tgttaagaaa gcgccggacc tggccgtttt catcgcgcag gtgaggcttg
     4561 agttcgggga agcggctccc cagcgaatcg agcagatcgt tcacgttctg agccgaggcc
     4621 tcgtagcgtt caatcccttc tgtgtggcgg cggaacgcgg atggaatcga gacggttacg
     4681 ttcatcgcgc acctcccgca gtctcaactc ccaccagttc gcgttccaga tattcctcaa
     4741 aggcggccag cttcggtgcg attgcctcag aggctttgaa tcggctggcg agcgcgtcag
     4801 tagttttcaa accattaccg gtaatacaca ggactgtggt ctcgtcgcgg ctgatgcgcc
     4861 cctgttcata gagcttgcgc gcggaagcca cggttactcc gccggccgtc tcggtgaaaa
     4921 caccttcact ttcggccaga agcgcgattc cgtcgacgat ttcaggatca ctcgcgtctt
     4981 ccgcccaccc accgctgccg gaaatgagtt gtgttgcata gaatccgtca gcagggtttc
     5041 cgatcgccag tgaccgcgcg atcgtgctgg gcttctgcgg ctcaatctca cgacgcccag
     5101 ctttcacggc gctgctgatg gggctgcaac cggtggcctg tgcgccaaaa aacttcacct
     5161 gtttggcttc cacgagtcct agtgtgacca actccttaaa agctttggca atcttggtga
     5221 tcagcgagcc tccggccatc gggactacta cgttgtccgg caggcgccag cccagttgct
     5281 cggcgatttc gtatcccacg gtcttcgagc cttcagcata gtacgggcgc aaattcacgt
     5341 tcacaaagcc ccagcggtgc ttgtcggcaa tctgcgagca gaggcggttc acatgatcgt
     5401 agttgccggc gatgcgtacg atcttggccc cataaacttc cgtgcccaga atctttgccg
     5461 tctcaaggtc agagggaatg aacacgcagg ccttgaatcc tccgcgcgcc gcctgagccg
     5521 caaccgcgtt ggccagattt cccgttgatg aacagctgac tacttcgaaa ttgaagttcc
     5581 gcgcctgcgc cagcgccacc gcgaccacgc ggtctttgaa ggaaagggtg gggaagcaga
     5641 cggcgtcgtt cttgatatag agcgagcgcg tgcggaaggt gtcgccaaga ttgctggctt
     5701 tcaccagcgg cgtgaagccc acgggaagcg tggcttcaaa attttccggc aagggaagca
     5761 gctctttgta gcgccacagg ttggtggcgc ggcgggagat tgcttcgcgg cttatcgtgg
     5821 gccggatgcg ctcccagtca taagcaactt ccagcggagc aaagcagctc tggcaaaagg
     5881 agatgggctg gttgccccat gtggtaccgc actcacgaca tcgcagttcg tatcccggat
     5941 tggtgctcat aatctctctt ttctgctgcc ggcaggtctt gtcgcccaaa agcacgaaac
     6001 ccgctgcttt cggcagcggg tttcaaaaaa tgctaactga gtattgctta acccgactgc
     6061 cgatatgaga agacacacat agccatggtg tgacagcaca tggccatgtt ggcagagggc
     6121 ttggacatca ggtgtttatc gtacccaagg cagggccgtt tcgcaagcag aaacaccatc
     6181 cacgccgctt cagaggctcg tagggcggcc cactgccgcc accccgcttc agcacgcgaa
     6241 tcttttgcag gctatacact tgatacatgt ctgaccaccc ccagaaccgc cttgcccagg
     6301 ccgcatcttc ttatctgcgt tccgccatgc accagcccat tgattggcat gagtgggggc
     6361 cggagccctt tgaaaaggcg aagcagcaga acaagccggt gctgctggac attggagcgg
     6421 tgtggtgcca ctggtgtcat gtaatggacc gcg
//
LOCUS       DASQYP010000274         3962 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_230659, whole genome shotgun sequence.
ACCESSION   DASQYP010000274 DASQYP010000000
VERSION     DASQYP010000274.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 3962)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3962)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3962
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_230659"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            586..1776
                     /locus_tag="VE783_08845"
     CDS             586..1776
                     /locus_tag="VE783_08845"
                     /inference="COORDINATES: protein motif:HMM:NF013866.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HYX53547.1"
                     /translation="MWRRYASRLTLLLFVLVSLGANASQPSGKVVDLSATDGTKLKAT
                     FFAAPKAGPGVLLLHQCNGQRKQWDDLASQLAAAGINVLTLDLRGFGESGGTPVDKAT
                     PEEARAQGDKWPGDIDVAFQYLQSQPGVKRDVIGLGGASCGVTNSVKTAVRHPKEVKS
                     LVLLSGNANLAERNFIRESTSLPLLCAAAEDDEFHPSVDAVEWIYDISRNPGKKFIHY
                     ATGGHGAEMFAAHPELRTAIVEWYVTTLIKTPGRAPAIVAKDAIQVPEPVKMLSLLDS
                     PGGASQAAKKLSEARKRDPNAVLFSEDLVNIIGYEYLQAGDPKRALEILKLNAEASPA
                     SANAQDSLGDAYLANGNKEQARESAKRALELLASDTKDPEARRNAIRDSAQQKLKQLG
                     EGTP"
     gene            1864..2214
                     /locus_tag="VE783_08850"
     CDS             1864..2214
                     /locus_tag="VE783_08850"
                     /inference="COORDINATES: protein motif:HMM:TIGR03433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PadR family transcriptional regulator"
                     /protein_id="HYX53548.1"
                     /translation="MAESLSFFHRELKKGSAELLILSLLEARPRHGYEISQLIENQSG
                     GAISFNIASFYPLLYRLEKRGWIQGRWVEKAGQRRRRYYKLTAAGREILKQQRDSWLE
                     FVAAMQRLTGLKNA"
     gene            2207..>3962
                     /locus_tag="VE783_08855"
     CDS             2207..>3962
                     /locus_tag="VE783_08855"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HYX53549.1"
                     /translation="MPDFENVVRDRLRSLGLSPAREAEIVDEIAQDLRDRYEAMLSSG
                     SSEAEAAKAVAAQFQRRDLAGELRPIERPAPEPLALGEPATGWWWSALRQDVRYGLRV
                     LRLNPAFTAVCVLSLALGIGANTAIFQLIDAVRMRTLPVKDPQELFVIRPTDSSRSGE
                     ATGRYSYSTNPMWEQFRARQQAFEAFAWGTTTFNLAPSGQVRYADGIWVSGEFFDVLR
                     VSPALGRVFHPPDDHPGCGALGAVISYSFWQREFGGSPDLTRETVALNGHSFPVIGVT
                     PAEFTGLEVGRKFDIAVPICSEPTIDGETALLNLRHGWWLAIMGRLKPGWSLEKAKAQ
                     VAAISPSVMQESLPEVYDAALAKRYKDLKLAPQAAATGLSNLRRDYETPLWLLLAIAG
                     LVLLIACANLANLMLARASAREREMAVRLALGAARSRLVRQLLTESLLLAIGGAALGI
                     GLAGLLSRLLVNYLRGGSGASRLFVPLVTDWRVLGFTTALAVLTCLLFGLAPALKATN
                     APPARVMSLAGRGLTATRERFSLRRALVIVQVALSLVLVFTALLFGGSLQKVLALDAG
                     FQREGLLVMDMDFTTLNIP"
BASE COUNT          807 a         1098 c         1224 g          833 t
ORIGIN      
        1 ggcacacggc ttcatcaacg cggacgtgtt taccgaagtc ctgtatgaca gcctgacgaa
       61 acaacccacc ggaccgaaga atgatcatgg acatatgcat agcagcaatt agtaaataga
      121 agctatgtca taagtgagtt aaccaggctg aaaacgattc ggggctgttg gttgattgcc
      181 cgtccggctt ctctcttgcg tgttgaatac cgcttttgtt agctgggtag cacaggcgca
      241 ctcgcctgtg ccgcagcatg acaattaccg ccgcaaattg ccgcacttga aagagacgtc
      301 ggttcgtact tcattccgtt tgcatagaag agacgatctg acgctgaatg atgaggcgaa
      361 gtggagtaac cggcacaggc gagggcgcct gtgctacaaa gcatgttgcc cgattgagtc
      421 atttacgaga acctctagca atttaggcga acctgatcag ccgccgttaa cgcaaccatc
      481 ggagatggaa tgacccgggc aacagcgtta atgacggctg aactttttct tccgtgtgac
      541 aagcgcgccc ggatgaagtc taattgggtg gttttggagg atcccatgtg gcgacgctat
      601 gcaagccgtc ttactctcct gttgtttgtt ctggtgtccc tcggggcaaa cgcgagccag
      661 ccgtcgggaa aagttgtgga cctctcggcg acagacggca caaagctcaa agccacgttt
      721 tttgccgcgc ccaaggctgg gcccggggtc ctgctgcttc atcaatgcaa tgggcagaga
      781 aaacagtggg atgatctcgc ctcacaatta gcggcagcgg gaatcaacgt gcttacgttg
      841 gacttgcggg gctttggcga gagcggcgga acgccggtgg acaaagccac tccagaggag
      901 gcccgggccc agggcgacaa atggccgggc gacattgatg tggcgtttca atacctgcaa
      961 tcccaacccg gagtgaagcg cgacgtgata ggactgggag gagccagttg cggcgtgacg
     1021 aattccgtaa aaacggcggt gcgtcatccg aaggaagtga agtctcttgt tttgttatca
     1081 gggaatgcaa atctcgcaga gcggaacttc atacgggagt ctacgtctct tccattgctg
     1141 tgcgccgcgg ccgaagacga tgagttccac ccttctgttg acgcggtgga atggatctat
     1201 gacatctccc gcaacccggg caaaaaattc atccactatg caacgggcgg gcatggcgct
     1261 gagatgttcg cggcgcaccc tgaattgcgc accgccattg tggagtggta tgtaacgacg
     1321 ctgatcaaga caccgggccg cgctcctgct attgtagcga aggacgccat ccaggtgccg
     1381 gaaccggtga aaatgctgag cctgctcgat tctcccggag gcgccagcca ggctgctaaa
     1441 aaactcagcg aggctcgaaa gcgggacccg aacgcggtgt tgttctcgga agacctggtg
     1501 aacatcatcg gctatgagta cctgcaggcc ggcgacccca aacgagcgct ggagatcctg
     1561 aagctcaacg cagaggcttc ccccgcttca gccaacgcgc aagacagcct tggtgacgct
     1621 tatctggcga acggcaataa agagcaggcc agggaaagtg cgaagcgcgc acttgagttg
     1681 ctggcttcag acaccaaaga ccctgaggcg cggcggaatg ccatccgtga cagtgcacag
     1741 cagaagctga aacagctggg cgagggcact ccgtaatata agccgattcc gccgcgggtc
     1801 accggtttac gatgggtacg acttgacact tccctgtctt cggcatatat gttatagcca
     1861 tatatggctg agtcactctc ctttttccat cgcgaattga agaaaggcag cgccgagctg
     1921 ctgatcctct cactgctgga ggcccgcccg cgtcacggat acgagatcag ccagttgatt
     1981 gagaaccagt ccggcggagc gatcagcttc aacatcgcgt cgttttatcc gttgctgtac
     2041 aggctggaga agcgcggctg gatccagggc cgctgggtgg aaaaagccgg acagcgccgt
     2101 cgccgctatt acaagctcac ggcagcgggg cgcgagatcc tgaagcaaca acgtgattcg
     2161 tggctggagt ttgttgccgc catgcagcgg cttacgggtt tgaaaaatgc ctgactttga
     2221 aaacgtggtt cgcgatcgcc tgcgcagcct ggggctctct cctgcccggg aagctgagat
     2281 tgtggatgag attgcgcagg acctgcgcga ccgttatgag gctatgcttt cttcgggttc
     2341 gtccgaagca gaagccgcta aggcagtggc tgcgcaattt cagcgacgcg atcttgcagg
     2401 agaattgcgg cccattgagc gacctgcgcc tgagccgctg gcgctcgggg agcctgctac
     2461 cggctggtgg tggtcggcgc tacggcagga tgtgcgctac ggcctgcgcg tgttgcgcct
     2521 gaatcccgca ttcaccgcag tctgtgtgct ttcgctcgcg cttgggatcg gggcaaacac
     2581 cgctatcttc caactcattg acgcagtcag gatgcgtacg ctgccggtga aggacccgca
     2641 ggaacttttc gtgattcggc ccacggattc cagtcgttcg ggagaggcga ccggacgcta
     2701 ctcttattcc acaaatccca tgtgggagca gtttcgcgcg cggcagcagg cgtttgaggc
     2761 gtttgcgtgg ggaaccacca cattcaatct ggcaccgtca ggccaggttc gttacgccga
     2821 tggcatttgg gtgagtggcg aattctttga cgtgttgaga gtgagccccg cactcgggcg
     2881 ggtgttccat cccccagacg atcatcctgg ctgtggcgct ctgggagccg tcatcagcta
     2941 cagcttctgg cagcgggagt ttgggggcag tcccgacctt acgcgcgaga cggtagctct
     3001 caatggccat tccttcccgg tgataggcgt gactccagcc gagttcacag gactggaagt
     3061 aggccggaag tttgatatcg cggtaccgat ctgttctgag ccgacgattg atggcgagac
     3121 cgcgctcctg aacctgcgtc atggctggtg gctcgcgatc atggggcggt taaaaccagg
     3181 gtggtcgctg gaaaaggcca aagcacaagt tgccgcgatc tctccatccg tgatgcagga
     3241 gagtctgccg gaggtctatg atgccgcgct ggcaaaacgc tacaaagatt tgaagctggc
     3301 accgcaagcc gcggctaccg gcctttctaa cctgcgtcgt gactacgaaa cgccactctg
     3361 gttgttgctg gcgattgccg ggctggtatt gctgatcgcg tgcgcgaacc tcgcgaatct
     3421 tatgttggcg cgcgccagcg cccgcgaacg cgaaatggcg gtccggctcg ctctgggcgc
     3481 agcccgcagc cgactggtac gccaactgct cacggaaagc ctgctgctcg cgattggggg
     3541 agccgcgttg ggcattggat tggcgggctt gctgagccgg ttgctagtca actatctgcg
     3601 cggcggctca ggcgcgtcac gattgttcgt tcccctggtg acggactggc gcgtgctggg
     3661 cttcaccacg gcactggctg tcctgacgtg cctgctgttc ggactcgctc ccgctctgaa
     3721 ggcgaccaat gcgccacccg cacgggtaat gagtcttgca ggccgtggac tcacggcgac
     3781 ccgcgaacgc ttcagcctcc gtcgcgcgct cgtgatagtt caggtggcgc tctcactggt
     3841 tctggtgttt accgcgttgc ttttcggcgg cagcctacag aaagtccttg cgctggatgc
     3901 tggctttcag cgcgaaggtc tgctggtgat ggatatggac ttcaccaccc tgaacatacc
     3961 gc
//
LOCUS       DASQYP010000275        15760 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_309763, whole genome shotgun sequence.
ACCESSION   DASQYP010000275 DASQYP010000000
VERSION     DASQYP010000275.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 15760)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15760)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15760
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_309763"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..715
                     /locus_tag="VE783_08860"
     CDS             <1..715
                     /locus_tag="VE783_08860"
                     /inference="COORDINATES: protein motif:HMM:NF023428.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53550.1"
                     /translation="NVLEVAAATASELSEITADIVKDTLQKRVLLYDKSGEEHYNLIS
                     ALHKSVRNSDVDASLYWLGRMLESGEDPLYIARRVVRMASEDIGLAAPEALNLCLSAK
                     DAIDFLGMPEGALALAQAVAYLALAPKSNALYTAYGEVLEDVEKTAAEPVPLHIRNAV
                     TKLMKQVGYGKGYQYAHDLDARVADMECMPDNLRGRRYYHPTTEGREKLLAQRLEEIQ
                     RARDAARKSSKGGDNEPAS"
     gene            complement(710..1129)
                     /locus_tag="VE783_08865"
     CDS             complement(710..1129)
                     /locus_tag="VE783_08865"
                     /inference="COORDINATES: protein motif:HMM:NF022789.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3147 family protein"
                     /protein_id="HYX53551.1"
                     /translation="MRITISISGLKQSRWYEFGLRFLFGGLVTAIAGLIAKEYGAGIG
                     GLFLAFPAIFPASATLIEKHEREKKQKHGLNGTKRARALVADDSAGAALGALGLASFA
                     VCTWLLMPNHSVALVLVVSAAAWAGVSLSAWSIWKRL"
     gene            complement(1126..1476)
                     /locus_tag="VE783_08870"
     CDS             complement(1126..1476)
                     /locus_tag="VE783_08870"
                     /inference="COORDINATES: protein motif:HMM:NF022789.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3147 family protein"
                     /protein_id="HYX53552.1"
                     /translation="MTDLLARFLLGGVIVSLFAAAGDLFKPKSFAGLFGAAPSVALAT
                     LVLTVAKHGHEYAAVEGRSMIIGAAAFLIYAQLASWSMMRHSISAMRTTLMLLPVWLV
                     IALGGWWVILGRPK"
     gene            complement(1473..2027)
                     /locus_tag="VE783_08875"
     CDS             complement(1473..2027)
                     /locus_tag="VE783_08875"
                     /inference="COORDINATES: protein motif:HMM:NF012922.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inorganic diphosphatase"
                     /protein_id="HYX53553.1"
                     /translation="MPKRPDNAYAAPTVLKPFDKEQQFIQVVIETPRGSRNKYKFEPK
                     LGSMKLNKVLPAGMEFPYDFGFVPGTRAEDDDPIDVLLFMDEQVFPGCVVESRLIGVI
                     EGEQKEEGGETIRNDRLVAVAKESHTHSDLTQITDINHRLLDEVAEFFVNYHQLSGSS
                     FKVLGFKGPREAGRLLKKAIKNAA"
     gene            complement(2117..2527)
                     /locus_tag="VE783_08880"
     CDS             complement(2117..2527)
                     /locus_tag="VE783_08880"
                     /inference="COORDINATES: protein motif:HMM:NF024773.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0120225 - coenzyme A binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA-binding protein"
                     /protein_id="HYX53554.1"
                     /translation="MNPSATDEIGHLLKNSRTIAVVGLSDSPLRPSYGVSAYMQSQGY
                     RIIPINPSIKGALGEKAVPELAEVKEKIDIVDVFRRSEFVPEIVDECIRLKVPAIWLQ
                     EGVIDEAAADRARKAGIFVVMDRCILKEHRARFR"
     gene            complement(2605..3753)
                     /locus_tag="VE783_08885"
     CDS             complement(2605..3753)
                     /locus_tag="VE783_08885"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53555.1"
                     /translation="MNRILDLIRRNQVPPAVMRTASKGALPLPATEMLEILVYLTQNP
                     VFAQDARMTLAGWDLQSARETVQDPKAPPEVIGYYWSEQNRRPALMPYMIENPAISEN
                     MLIELAAACPREIINTLLASPRILSSPAVTEALATNPRLLPEDLKRLRGENASDASVD
                     VASDSAARPEEVVAVEWQREHADEIAAEAGKSFELVGEEAAKPDSGEASPEASTSTES
                     LAISAMALHNKAQAAAANEPERLTVLQRVARMNASERVKTAFIGGKEERAILIRDGAK
                     VVQNAVLASPKLTDPEVESFAAQKNVNENVLREIARNRRFMKHYSVVRNLVLNPKTPL
                     DVSMPLVKMLMVYDLKALQHSKNVSEGIRRLAFKYYKEKASSGGKTRD"
     gene            complement(3835..4929)
                     /gene="prfB"
                     /locus_tag="VE783_08890"
     CDS             complement(3835..4929)
                     /gene="prfB"
                     /locus_tag="VE783_08890"
                     /inference="COORDINATES: protein motif:HMM:TIGR00020.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 2"
                     /protein_id="HYX53556.1"
                     /translation="MKNWNANILPSATKSRTCGAIFDAPALRTQLADIEKQIADPAVW
                     SNQERSQQLMRQRKRLESSLTMDADLARRSEDIAAYFDLAREGEAVSDDLKKEIDDLR
                     EIADKLETQTLLSGENDARNAIVTIHPGAGGTESQDWADMLLRMYLRWAERQGFATEL
                     NEYQPAEEAGIKSATFTVNGDYAYGLLRSEIGVHRLVRISPFDQQSRRHTSFASVFVS
                     PEIDDSIQIEIKPEDIRIDTYRSGGKGGQHVNTTDSAVRITHMPTGIVVACQNERSQH
                     KNRDKAFKILRSKLYEYELEKKREVSKKLEDSKLDIDFGSQIRSYVLAPYRMVKDHRT
                     KIDVGDVDRVLDGDLKPFIRAWLMAQRNQS"
     gene            complement(4942..6552)
                     /gene="lnt"
                     /locus_tag="VE783_08895"
     CDS             complement(4942..6552)
                     /gene="lnt"
                     /locus_tag="VE783_08895"
                     /inference="COORDINATES: protein motif:HMM:TIGR00546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0016410 - N-acyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006497 - protein lipidation [Evidence
                     IEA];
                     GO_process: GO:0042158 - lipoprotein biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="apolipoprotein N-acyltransferase"
                     /protein_id="HYX53557.1"
                     /translation="MRHIPTRAWLLSAISAVLQILVFPRTGLFFLCWFAVAPLVYALL
                     RGRGGEGELVDSEGRSLRPFTLWQGFLVAWISGVIWYLGTCYWIYPVMNDYGGLNGFI
                     SFLLTLAFSLIMALHHGIFGFLVVLMARRSTLGNRRPLFLAPFFWVALELARDRIVGV
                     PWNPLGGAQVDNVPFSRIAEVTGVYGLSFAVMLVNSAFVAGMLLFGRRRINLLISASA
                     AAIALQMGVFARPEPFPSSKQAVLVQENVPILEPAKWTPQFYDQTIGSLEQISVAHAK
                     EAHASPGLIIWPESPAPFFENDPRLQHWLTAIAQDTNSYLVVGSVAFAGGQSGSDKQQ
                     IYNSALIIDPAGRQIGRYDKMHLVPFGEYIPFQDLLFFASKLTREVGDFARGTERKVF
                     DLNGTRYGVLICYESVFPDEVRQFAANGAQVLINISNDGWYGETGAPFQHMQMARMRA
                     IENHRWLLIDTNNGVTAAIDPYGRVVTRVQRNVRTAITVPYSPQSETTFYTRNGDIFA
                     YLSVIISVVAGVWRTRIPAGTMIEARPA"
     gene            6691..6819
                     /locus_tag="VE783_08900"
     CDS             6691..6819
                     /locus_tag="VE783_08900"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53558.1"
                     /translation="MPIFKYLFFIGLIGAVPVIIVTAIKTAQSMLEEDETARDNKA"
     gene            6906..9305
                     /locus_tag="VE783_08905"
     CDS             6906..9305
                     /locus_tag="VE783_08905"
                     /inference="COORDINATES: protein motif:HMM:NF024910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="APC family permease"
                     /protein_id="HYX53559.1"
                     /translation="MSSGSGTTPPQTSNRVRIVVATSVMLTFISYWRAAAIVLNDLGS
                     SAFYAGGIAEQAIGKSAPWFILGVMLFAFAVRSVYVESCSMFTRGGVYRVVKEALGGT
                     FAKLSVSALMFDYILTGPISGVSAGQYIAGLINELFAAAELHGWVPRAMHHLMNGHPL
                     HLNENYAAAAFALIVTLYYWWENIKGIEESSDKALRVMQITTVMVVILMVWAIYTVLH
                     NGSHLPPLPIPENMKFSDEALGFLKGTELSKMLGLFGILIAFGHSVLAMSGEESLAQV
                     NREIASPKLRNLKRAALIIAIFSFVFTGIGSMLAVMIIPDQVRVSIYKDNLISGMAMY
                     MVGPHVLKLVFRTFVVVVGFLILSGAINTSIIGSNGVLNRISEDGVLTDWFRRPHKRF
                     GTSYRIVNLIVGLQIFTILASRGDVYVLGEAYAFGVMWSFTFNSLAMLVLRFKYKGER
                     GWRVPPNVKIGKYEIPLGLLSVHLVLLSTAVVNLFTKEIATKAGIAFSAAFFLIFTVS
                     ERVNKRKFSHAEQQMKEHFQLEHQETIEREGVQVRAGNLLVTVRDANTLNHLRWALEI
                     TDTQKEDIVAMEARLTGYGSAEYDLAMEQIFSDYEQTLFTKAVSIAESYGKTISLLVV
                     PARDVFTAIVQTANAMESSAVVAGLSSKMTGEEQAFRMGQAWEAMPEPKRQFVFQVVR
                     PDNSVETYRIGPHTPTMKTEDVHLVHKLWLDVKKFPGTEEIHHSDIVTLALTRLARDY
                     NVDKDDVLKNLKKGIRGPLPKTTPFVREPDTMETQTRTDGAHDGDGKRERPMPPVTGP
                     R"
     gene            complement(9363..10325)
                     /locus_tag="VE783_08910"
     CDS             complement(9363..10325)
                     /locus_tag="VE783_08910"
                     /inference="COORDINATES: protein motif:HMM:TIGR02271.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YsnF/AvaK domain-containing protein"
                     /protein_id="HYX53560.1"
                     /translation="MQDMNSSSTGNQLVAFFNDKEDAFAAISELKDAGFTSDQIGLAM
                     SGARNISDTSAGKFNSTQSASSPTGSAHDERGMWEKIKDFFTGEDPNYEGESYAGEDY
                     ERTFGHLSLSDEQSRYYHSGISSGGALVTVNAPAGRLGAAREILEDNDADLRSGSFSE
                     LDRSHSGATATTNLQAGADAGRGLTDQGERHIQLRGEMLRAVKERVQKGEIRLRKHVI
                     TENQTLNVPVTREEVIVEQVPASGTASVSGAIGDQGEIRVPVSEERVRVTKEPVVTGE
                     VRVQKRTVQDNQQVSGEVRHEEVDVENQGQVAVTDKTRKKKPAA"
     gene            complement(10836..11390)
                     /locus_tag="VE783_08915"
     CDS             complement(10836..11390)
                     /locus_tag="VE783_08915"
                     /inference="COORDINATES: protein motif:HMM:NF014522.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fasciclin domain-containing protein"
                     /protein_id="HYX53561.1"
                     /translation="MKNKLFAMIALFTMAAAALFAVAKNPMVGGQEMFPSKNIIQNAV
                     NSADHTTLVAAVKAAGLVETLEGPGPFTVFAPTNEAFNKLPGGTVDTLLKPENKETLT
                     KVLTYHVIAGKLSAADLKKLIKAGNGAAELKTVEGGKLWATLDEGKHIMLKDEKGGAA
                     LVTIPDVFQSNGVIHVIDAVVMPN"
     gene            complement(11590..12150)
                     /locus_tag="VE783_08920"
     CDS             complement(11590..12150)
                     /locus_tag="VE783_08920"
                     /inference="COORDINATES: protein motif:HMM:NF014522.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fasciclin domain-containing protein"
                     /protein_id="HYX53562.1"
                     /translation="MMKHKYSFLVLLLISAAALLAADKNPVVGGQEMLPTNTIYANLS
                     KSADHTTFMSAIKAAGLEDQLKAAGPITVFAPTNQAFADMPKGTFENLMKPENKEQLK
                     KLLLYNMASGKWTTSDLKKKIKESKEATAEIAALQGGKLTLKDHSGMHLMVQSEDDDI
                     GMFNVSDVLCSNGVIHVIDNVMMPKQ"
     gene            complement(12180..14402)
                     /locus_tag="VE783_08925"
     CDS             complement(12180..14402)
                     /locus_tag="VE783_08925"
                     /inference="COORDINATES: protein motif:HMM:NF012801.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015267 - channel activity [Evidence IEA];
                     GO_process: GO:0015891 - siderophore transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HYX53563.1"
                     /translation="MPAALVMIAAMFFAGGTAASASPFGSVKVIVHDPQHRPVQGAEV
                     VVQSRTSSFKQSAKTNDEGIGTVMTLPVGEYYVAVLSPGFAADAQSVTVTSDNVQELH
                     FALALAAHQEAVEVTAEPQTVNPSSSTPETVVSRTEIAQTPGADRTNSMAMITNFVPG
                     AAVVHDQLHVRGGHQVTWEIDGVPVPNTNIATNIGPQFDPKDIDYMEVQRGSFSAESG
                     DRTYGNFNVITRTGFERSRQAELIGSYGNYNTTDNQLSFGDHNDRSAYYVSLSGNRSD
                     HGLETPTITNLHNDSSGEGGFTSLILNATPHDQLRFVGSARGDRFQVPNAPDQQDLGI
                     SDREREQDFFGNFSWVHTFGQSVLLTVAPSYHFNRAAFEGAGDLPHRSVATDNRASSY
                     DGGEVTLAVVKGRHNARAGMYGFAQHDNTLFALTGTDPDLGPVNVPPTRVKANAGLEA
                     MWIEDQYKAASWLTFNAGLRFTHFDGLVTENVSSPRLGLAIQVPKLHWVLRAAYSRYY
                     QAPPLDTISNSILQATDPAAGFLPLKGERDEQHEFGLTIPVRGWTVDLDQFRTGAHNY
                     FDHDAIGNSNLFFPLTIEAARIVGYEATVRSPKLFKKMDVHLAYSHQSVEGSGAITGG
                     FTEFQPPPEGFFYLDHDQRHTLSTGVTSTLPFRTWIASNLSFGSGFLNGDGPGHLPAY
                     ASVDFSVGHTFSENLSAKLTVTNLTDHRYSIDLSNSFGGSHMSDPRMVSLQLRYQFHY
                     "
     gene            complement(14597..15007)
                     /locus_tag="VE783_08930"
     CDS             complement(14597..15007)
                     /locus_tag="VE783_08930"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53564.1"
                     /translation="MSMRRVCSILTAVGLLFSVASPLWAADMGSLQPMQCHREPMQAA
                     ISGHSQTHNHHCHEMEDHSVSAPDGTSIQAVNVPKDCPMNCCLQGTPQAGTALAASVY
                     LPLLVVTDCSLLYVAVTFTSPGFSSHTDRGPPRQ"
     gene            complement(15140..>15760)
                     /locus_tag="VE783_08935"
     CDS             complement(15140..>15760)
                     /locus_tag="VE783_08935"
                     /inference="COORDINATES: protein motif:HMM:NF013069.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HYX53565.1"
                     /translation="EGVSLGSGVSKVKQAVNSLHLPSAIRVEYGGTYQEQQKSFRDLL
                     LVLVLAIVLVFAVLLFEFRSFSAPTAILASALLSTSGVFLALLVTRTTFNVASFMGVI
                     MVVGIVAKNGILLLDAHHKFEHAGFEPEEAMIQAGRRRLRPIVMTAMASVAGMLPLAF
                     ALGAGSQMLQPLAIGVIGGILISMVLSLIVTPAVFFYMTAPRRTAM"
BASE COUNT         3439 a         4388 c         4499 g         3434 t
ORIGIN      
        1 caacgtactt gaagtcgccg cagccactgc cagcgaactg agcgagatca cggcagacat
       61 cgtgaaagac acgctgcaga agcgtgtgct gctgtatgac aagtcgggag aagagcacta
      121 caacctgatc tcggcactgc acaagtcagt acgtaacagt gacgtggacg cgtctctcta
      181 ctggctgggt cgaatgctgg aatcgggaga agatccgctc tacatcgcgc ggcgggtagt
      241 tcggatggcg tcagaggaca ttgggctcgc cgcgccggag gcgcttaacc tttgcctgtc
      301 tgccaaagac gccattgatt ttcttggtat gccggaaggc gcgctggccc tggctcaggc
      361 ggtggcatat cttgctctgg cgccgaaatc aaacgccctc tacaccgcgt acggcgaagt
      421 tctggaagac gtggaaaaga ccgccgccga accggtgccc ctgcacattc gcaacgcggt
      481 aacgaagctc atgaagcagg tgggatatgg aaagggttac cagtacgcac acgatcttga
      541 cgcgagagtc gccgacatgg agtgcatgcc cgacaatctc cggggccggc gctactacca
      601 tccgacgact gaaggccggg aaaaattgct cgcccagcga ctcgaagaaa ttcagcgcgc
      661 acgcgacgcc gctcgcaaaa gcagcaaagg cggcgacaat gaacctgcct catagccgct
      721 tccagatcga ccatgccgac agtgaaactc cggcccatgc cgcggcgctc accacaagga
      781 cgagagcaac agagtgattg ggcatcagca gccatgtgca gactgcaaag ctggccaatc
      841 ctaaggctcc cagcgcggcc ccggcggaat catcggccac gagcgcacgc gcgcgctttg
      901 ttccgttgag gccgtgcttc tgcttcttct cccgctcatg cttctcgatc agagtcgcgc
      961 ttgcggggaa aattgccgga aatgcaagaa acagaccgcc gatgccggcg ccgtactctt
     1021 ttgctatcag gcctgcgatc gcggtaacca gaccgccgaa caggaatcgc aatccgaatt
     1081 cataccagcg tgattgcttc agtccggaga tgctgatggt tatcctcatt tcgggcggcc
     1141 cagaatcacc caccatcctc cgagggcaat gacaagccag accggcaaaa gcatgagggt
     1201 ggtcctcatt gcggagatcg aatgccgcat catggaccat gacgccagtt gcgcataaat
     1261 gagaaatgcg gcggcgccga tgatcatcga gcggccttcc actgctgcat actcgtgacc
     1321 gtgtttcgcg acggtgagca cgagtgtagc caacgcgaca gagggtgctg cgccgaatag
     1381 tcctgcaaaa ctcttcggct tgaacaggtc accagcggcg gcaaagagtg acacgatcac
     1441 gcctcccagc agaaatcggg cgagcagatc ggtcatgccg cgtttttgat cgccttcttt
     1501 agcaggcggc ccgcttccct gggaccctta aacccgagca ccttgaagga ggaaccgctg
     1561 agctggtgat aattgacgaa aaattccgcc acttcatcca gcagcctgtg attgatgtcc
     1621 gtgatctggg tgagatcaga gtgtgtatga ctttctttgg cgacagccac cagtcgatca
     1681 ttccggatgg tctcgccgcc ctcttctttt tgctcaccct cgattactcc gatcaatcga
     1741 ctctcgacaa cgcagcccgg aaaaacctgc tcgtccatga aaagaagtac atcaatggga
     1801 tcatcatctt cagcgcgcgt acccggcaca aatccgaagt catacggaaa ttccattccc
     1861 gcgggcagga ctttgttgag cttcatggag ccgagcttcg gttcgaactt gtacttattc
     1921 cggctgcctc gcggcgtctc aatgaccacc tgaataaact gctgctcctt gtcaaaaggt
     1981 ttgaggacag tgggcgctgc atacgcattg tcaggacgtt tgggcatatt gggtctcgca
     2041 caaattctca gagctgagat gaagcgagag agcaggcagt tggccccggc gctgtaaggt
     2101 tactgcacgc atcgttctac cgaaaccggg cgcgatgttc tttgagaata cagcggtcca
     2161 tcaccacgaa tatgccggct ttgcgggcac ggtcggcagc agcttcgtcg atgacgcctt
     2221 cctgaagcca gatcgccgga accttcaggc ggatacattc gtccacgatc tccggcacaa
     2281 actcggaacg acgaaacaca tcaacgatat caatcttttc tttcacttca gcgagctcag
     2341 gtacggcctt ctccccgaga gcccctttga ttgagggatt aatcgggatg atccggtatc
     2401 cctggctttg catgtacgcc gaaactccat agctcgggcg caagggactg tcagagagac
     2461 ccaccacggc aatggtccgg gaatttttga gtaggtggcc gatttcgtca gtggcggaag
     2521 ggttcacgta agcgggctcc tgagtgacgg accattttag gtcaagcggc aagatggttc
     2581 cagcttcatg aagatgccgg gatgtcagtc cctggttttg cctcctgaac tcgccttttc
     2641 cttgtaatac ttgaatgcca gcctgcgaat gccctcagaa acattcttgc tgtgctgaag
     2701 cgcctttagg tcataaacca taagcatctt caccagcggc atggaaacat cgagcggcgt
     2761 tttaggattg agcaccaggt tgcgcaccac gctatagtgc ttcataaagc ggcgattgcg
     2821 cgcgatctca cgcagcacgt tttcgttcac attcttctgg gcagcgaagc tctccacttc
     2881 gggatcggtc agctttggtg aggccagcac cgcattctgc accactttag cgccgtcgcg
     2941 gatcaggatg gcccgctctt cctttccgcc tataaatgcc gtcttcacgc gttcagaggc
     3001 attcatgcga gccacgcgtt gcaacactgt caggcgctcc ggttcatttg cggcggcggc
     3061 ctgcgccttg ttatgcaggg ccatggccga tatggccaga gattccgtgg aggttgaagc
     3121 ttctggggaa gcttcgccgc tgtctggttt tgctgcctct tcacctacca attcaaagct
     3181 cttccctgcc tcggccgcga tttcgtcggc atgttcccgt tgccactcaa cggcaacgac
     3241 ttcctccggc ctcgccgcgg agtctgaggc tacgtcgacg gaagcatccg atgcgttctc
     3301 accgcgaaga cgcttgaggt cttccggcaa caagcgcgga ttggttgcga gcgcctccgt
     3361 cacggcaggc gaagagagta tccgcggact ggccaagagg gtattgatga tttcacgagg
     3421 acaggctgcg gccagctcaa tcagcatgtt ctctgatata gcggggttct cgatcatgta
     3481 cggcatgagt gccggacggc ggttttgctc ggaccagtag tagccgatca cttccggggg
     3541 cgccttcggg tcctggaccg tctcgcgggc agactgcagg tcccagccgg cgagcgtcat
     3601 acgggcatcc tgagcgaaca ccgggttctg cgtgagatac accagaatct ccagcatctc
     3661 cgtcgcggga aggggcagcg cgccttttga tgctgtgcgc atcaccgcgg gcggcacctg
     3721 attgcggcgt atgagatcaa ggattctgtt cattgatagc gcagggccct gccctgagtt
     3781 tccggaagag cagtcgacac gactgagccg tgccgcttca tcatcgactt acctttacga
     3841 ctgattacgc tgtgccatca accatgcacg gatgaacggc ttcaagtcac catcgagcac
     3901 gcggtccacg tcgccaacgt ctatctttgt gcggtggtct ttcaccatcc gatatggggc
     3961 gagcacataa gaccgtatct gcgagccgaa gtcgatatcc agctttgaat cctcgagctt
     4021 ctttgagact tcccttttct tctcgagctc gtattcatag agcttggaac gcagaatttt
     4081 gaaagccttg tcgcgatttt tatgctgcga gcgctcgttc tggcacgcaa ccacgattcc
     4141 ggttggcatg tgcgtgatgc gtacagcaga gtctgtggta ttcacgtgct gcccgccctt
     4201 accgccggac cggtacgtgt caatgcgaat atcttccggc ttgatctcaa tctggatgga
     4261 atcatcaatt tccggagaga caaagacgct ggcaaatgag gtatgccggc ggctctgctg
     4321 gtcgaacggc gagatacgga ccaggcgatg cacgccgatt tcactgcgca gcaagccgta
     4381 agcgtaatct ccgtttacgg tgaaggtagc ggatttgatg ccggcttcct cggcaggctg
     4441 atattcgttc aattcggtcg cgaaaccctg acgctccgcc cagcgcagat acatgcgcag
     4501 gagcatatct gcccagtcct gcgattcagt tccgccagca ccgggatgga tggtcacgat
     4561 ggcattgcgc gcgtcgttct cgcctgacag cagagtctgg gtttccagct tgtcagcaat
     4621 ctcgcgcagg tcatcgattt cttttttcag gtcatcgctg acggcttcgc cttcgcgagc
     4681 cagatcaaaa taagcggcga tgtcctcgga acggcgcgcc agatcggcat ccatggtgag
     4741 tgaggattcc agccgcttcc gctggcgcat gagttgctgc gagcgctcct ggtttgacca
     4801 gaccgctgga tccgcaattt gtttttcaat gtcagctagt tgcgtacgga gagcgggagc
     4861 gtcaaagata gctccgcagg tccgtgactt tgtcgcggac ggcaatatat tcgcgttcca
     4921 gttcttcaac cataatcttt actatgcagg ccgggcttca atcattgtgc ccgcggggat
     4981 gcgggtgcgc cacacgcctg ccactactga gattatcaca gatagatacg cgaaaatgtc
     5041 gccattccgg gtgtagaacg tcgtttccga ctggggcgag tacggcacag tgatcgctgt
     5101 gcggacattc ctctgcaccc gggtcacgac gcgtccgtag ggatcaatgg cagcagttac
     5161 accgttgttg gtatcgatga gcagccagcg gtggttttcg atcgcgcgca tacgcgccat
     5221 ctgcatgtgc tggaaaggcg ccccggtttc gccgtaccag ccgtcgttcg agatattgat
     5281 cagaacctgt gcgccattcg cggcgaactg gcgcacctcg tcgggaaaca ccgactcata
     5341 acagatcaga acgccgtagc gggtgccgtt caggtcgaag accttgcgtt cggtaccacg
     5401 cgcaaagtcg cccacttcgc gggtgagttt gcttgcgaag aagagcagat cctgaaatgg
     5461 aatgtattcg ccgaatggga ccaggtgcat tttgtcatag cggccgatct ggcgccctgc
     5521 cgggtcaata atcagcgcgg aattgtaaat ctgctgcttg tcacttcccg actgaccacc
     5581 cgcaaaagca acgctgccca ctaccaggta agaattcgtg tcctgcgcaa tggcagtaag
     5641 ccagtgctgg aggcgaggat cattttcgaa gaacggcgct ggggattccg gccagatgat
     5701 cagcccaggg ctggcgtggg cttcctttgc atgcgcaaca ctaatctgct ccagcgaacc
     5761 gatcgtctga tcgtaaaatt gaggtgtcca tttcgccggt tcaaggattg gcacattttc
     5821 ctgaacgagc acggcttgct tggaagacgg gaatggctct ggccgcgcga acactcccat
     5881 ctgcaacgca atggcagccg cgctggccga gatcagcagg tttatgcggc gacggccgaa
     5941 gagcagcatt ccagcaacaa acgcggaatt caccagcatc acagcgaagg acagtccata
     6001 aacacccgta acttcggcaa tgcgggagaa cggcacgtta tccacctgag cgccgcccag
     6061 tggattccag ggcactccca cgatgcggtc gcgggccagt tcgagcgcca cccagaagaa
     6121 aggcgccagg aacaagggac ggcggttccc aagcgtggac cgccgcgcca tgagcaccac
     6181 cagaaatcca aaaatcccgt ggtggagtgc catgatcagt gaaaaagcca gggtgagcag
     6241 gaaggagatg aagccgttga gcccgccgta gtcgttcatg acgggataaa tccagtaaca
     6301 ggtccccagg taccagatca ctccagagat ccatgccacc agaaaaccct gccagagggt
     6361 aaacggacgc agagagcggc cttccgagtc caccaactca ccctcaccgc cgcgcccgcg
     6421 aaggagcgcg taaaccaggg gcgccacggc aaaccagcaa aggaaaaaaa ggcctgtccg
     6481 gggaaagaca agaatctgca acactgctga aatcgcggac agcagccagg ctctggttgg
     6541 aatatggcgc accggtgacg attttaacaa gcgccggacg tgcgctggaa ggaactccgt
     6601 ccgaaggaca gtcagcgaat cattggtaac tttgattccg ggtggcggcg ggactacaat
     6661 gagtcagtgg atttcctggc tcagcatttt ttgccgatct tcaaatacct cttttttatt
     6721 ggcctgattg gcgcggtgcc cgtgatcata gtaaccgcca tcaagacagc gcagagcatg
     6781 ctggaagagg acgagacggc ccgggataac aaggcgtagg agaactcaga ggctcgagtc
     6841 cggccacccg gaagcagcta acctgcccgg tttcctgttt cccggcggct gttcttattg
     6901 acaccatgtc atcaggttcg ggtactaccc caccccaaac atcgaaccgg gttcgcatcg
     6961 ttgttgcgac ctcggtgatg ctcaccttca tctcctattg gcgtgcggcc gccatcgtgc
     7021 tcaacgatct tggctcatca gcgttctacg cgggcggcat tgcggaacag gcaatcggaa
     7081 agtcggcgcc ctggttcatc ctcggcgtaa tgctcttcgc atttgcggtg cgctcagtct
     7141 acgtggagag ctgttcgatg ttcacgcgcg gaggagttta ccgcgtggtg aaagaagctc
     7201 ttggcggaac gttcgcgaag ctcagcgttt ccgcgctgat gttcgactac attcttaccg
     7261 gaccgatctc gggcgtttcg gcgggccagt acattgccgg cctcatcaat gaactgttcg
     7321 ctgctgccga acttcatggc tgggtgccgc gcgcaatgca ccacctgatg aatgggcatc
     7381 cgctgcacct gaatgagaac tatgctgccg cagccttcgc cctgatcgtg acgctctact
     7441 actggtggga gaacatcaag ggcattgaag agtccagcga taaggcgctg cgcgtcatgc
     7501 agatcacaac cgtaatggtg gtgatcctaa tggtctgggc gatttatacc gtattgcaca
     7561 atggctccca cctgccgccg ctgcccatac ccgagaacat gaagttcagc gacgaggcgc
     7621 ttggattcct caaagggacc gaactctcga agatgcttgg tctgttcgga atcctgattg
     7681 ccttcggcca ctccgtgctg gccatgagcg gcgaggaatc gctggcgcag gtaaaccgcg
     7741 agattgccag tcccaagctt cgcaacctga agcgcgccgc gctgattatt gccatcttca
     7801 gctttgtctt caccggcatc ggttccatgc tggctgtgat gatcattccc gatcaggtcc
     7861 gcgtctccat ttacaaggac aacctgattt ccggcatggc gatgtatatg gtcgggccgc
     7921 acgtgctcaa gctcgtgttc cggaccttcg tggtggtggt tggattcctg attctttccg
     7981 gtgcgatcaa tacctcaatc atcggctcga atggcgtgct gaatcgaatc tccgaggatg
     8041 gcgtgctcac cgactggttc cggcggccgc ataaaagatt tggcacgagc taccggatcg
     8101 tgaatttaat tgtcggccta caaattttca ccatcctggc aagccggggc gacgtatacg
     8161 tgctgggcga ggcttacgct ttcggtgtga tgtggagctt caccttcaac tcgctggcga
     8221 tgttggtact tcgcttcaag tacaagggcg agcgcggctg gcgcgtaccg ccgaatgtga
     8281 agatcggaaa atacgaaatt ccgctcggcc tgctttccgt tcacctggtt ctgctgtcta
     8341 ccgcggtggt taaccttttt accaaggaga ttgctaccaa ggctggaatc gctttctcgg
     8401 cggcattctt cctaatcttc actgtctctg agcgcgtgaa taagcggaag ttctcccatg
     8461 ccgagcagca gatgaaagag cacttccaac tcgagcacca ggagaccatc gaacgcgagg
     8521 gagtgcaggt ccgtgcgggc aatctgctgg taacggtgcg cgacgcgaac acgctgaacc
     8581 atttgcgatg ggcgctcgag attacagata cccaaaaaga ggatattgtg gccatggagg
     8641 cgcgcctcac cgggtatggc agcgccgaat acgatctggc catggagcag attttcagcg
     8701 attacgagca gacgctcttt accaaggcag tctcaatcgc tgagagctat ggcaagacga
     8761 tttccctgct ggtagtcccg gcacgcgatg tgtttaccgc gatcgtgcag accgcgaacg
     8821 ccatggaatc ctccgcagtg gttgccggcc tttccagcaa gatgacaggc gaggagcagg
     8881 ccttccgtat gggacaggcg tgggaagcca tgcccgagcc gaagcggcag ttcgttttcc
     8941 aggttgtacg tccggataat tccgtagaaa cctatcgcat tggcccgcac acgccaacca
     9001 tgaaaactga ggacgtgcac ctggtccaca agctctggct ggatgtgaaa aagtttccgg
     9061 ggacagagga aatccatcac tccgatattg ttaccctggc tcttacgcgc cttgcccggg
     9121 actacaacgt ggacaaggac gatgtcctga agaatttgaa gaaaggcatc cgtggtcctc
     9181 tgccaaaaac aaccccattt gtgcgagagc ctgacaccat ggaaacccag acacgcacag
     9241 atggcgctca cgacggagat ggcaaacgag aacggcccat gccgccggtg accggcccaa
     9301 gataaggtac agaagagagc ccgccacaac ggcgggcccc caattgccat tcttgcaatg
     9361 aatcaggctg ccggtttctt cttcctggtt ttgtccgtca ccgctacctg cccctggttc
     9421 tcaacgtcca cttcttcatg gcgtacctca cctgagactt gctgattgtc ttgaaccgtg
     9481 cgcttctgca cgcgtacttc gccggttacc acaggttcct tggttacccg gacgcgctct
     9541 tcggacacgg gaacgcggat ctccccctga tcaccaatcg cgcccgagac ggaagcagtt
     9601 ccggatgcgg gtacttgctc cacgatcact tcctcgcgag tcacaggaac gttcaacgtc
     9661 tggttttcag taatcacgtg cttgcgaagg cgaatttcgc ctttctggac gcgctctttt
     9721 acggcacgca gcatctcgcc gcgcagttgg atatgtcgct cgccttgatc cgtgagtccg
     9781 cggcccgcgt ctgcgccagc ctggaggttt gttgtggccg tggcgcctga gtgtgagcgg
     9841 tcaagttcac tgaagctacc gctacgcagg tcagcgtcat tatcctccag aatttcccga
     9901 gcggccccaa gacgaccggc aggagcattc acagtaacaa gggcgcctcc agaggagatt
     9961 ccggaatggt agtagcggct ctgctcgtct gacagtgaga gatgtccaaa cgtgcgctcg
    10021 taatcttcgc cagcgtagct ctccccttca tagtttggat cttcgcccgt gaagaagtcc
    10081 ttgatctttt cccacatgcc acgctcgtca tgggcgcttc cggtcgggga agaggccgat
    10141 tgagtgctgt tgaacttgcc cgctgaggta tctgaaatat ttcgggcgcc ggacatcgcc
    10201 agtccgatct ggtcagaggt gaaaccagcg tccttgagct cagatatggc cgcaaaagcg
    10261 tcttccttgt cgttgaaaaa tgctaccagt tgattaccag ttgaggatga attcatgtcc
    10321 tgcatatata agactgctcc tgttttgaag ttgagtccca tgagatgcct ttcgcttggg
    10381 agcggtgtgt agtggactgt gaaaaagcaa atggactgga gaaaaatcga gtggggtcgc
    10441 gagctgaaga gatcgcacgt atgcggacca gcctggaccc tgtgacggac actcggaaga
    10501 ccagcgcatt cggttgcagg ttgaatgtca gagcgcaacc gatcacgaca aattggttgg
    10561 tccagaaatg gctcaggccg gacaagtgtc cggcctgagc acagccatag tgtaggtaag
    10621 gaacgagtct gatgggcgct cgtctgaact ggtagctcca gatggccctc aaactggtaa
    10681 aaaaatgtta tcagagtaac caatcgcacg cataggtgat ttggatagaa taagagattt
    10741 tttagagtag ctcatcggag aacgatagaa cggccgttca ggaatgcacg agcctccgca
    10801 attcggaggc tcagctcgag ttccatgaga gttccttaat tcggcatgac aacagcgtca
    10861 atcacgtgta tgacaccgtt agactggaaa acgtctggta tggtgaccag agcagcgcca
    10921 cctttttcgt ccttgagcat aatgtgcttg ccttcatcga gtgtggccca gagctttcca
    10981 ccctcaaccg ttttcagttc ggcggcgcca tttccggctt tgatcaactt cttcaagtcg
    11041 gctgcgctca gtttgcctgc gattacgtgg taggtcagca ctttggtaag ggtctctttg
    11101 ttctccggct tcaacagcgt gtcaacggtt ccgccgggca gcttgttgaa tgcttcgttc
    11161 gtgggggcaa agacggtgaa tgggccgggg ccttcgagcg tctctacgag tccggcggct
    11221 ttcacggctg caactaatgt ggtgtggtcg gccgaattca cggcattctg gatgatgttc
    11281 ttgctcggga acatctcctg gccgccaacc atggggttct ttgccacggc gaatagagcg
    11341 gcagccgcca tggtgaacag ggcaatcatt gcgaacagct tgtttttcat gtacctattt
    11401 ttccttccag cgaaatctcg ctttcacacg gaatacggcg cgctgttcgt gtttggattt
    11461 tcacggaggc acttatttat ttttgcggaa acggctctgc cgaggaatcc agctacatcg
    11521 aaaggacgta ctttcaaaac aaaaacggcc acctattccg gcggccgttt tgatttgcgc
    11581 tgagagcagt tactgtttcg gcatcatcac gttatcgatc acgtggatca ccccgttgga
    11641 gcacagcaca tcagagacat tgaacattcc tatgtcgtcg tcttcactct ggaccatcag
    11701 gtgcatgccg ctgtggtctt tgagagtgag cttgccgccc tggagcgctg ctatctccgc
    11761 ggtggcttcc ttgctctcct tgattttctt tttgaggtcg gacgtggtcc atttgcccga
    11821 agccatgtta taaagcagca gctttttaag ctgctctttg ttttccggct tcatcaggtt
    11881 ctcaaaagtt cccttcggca tgtcagcaaa ggcctgattg gttggagcaa atacggtgat
    11941 tggtccggcg gccttcaact gatcttcgag accggcagcc ttgatggctg acatgaaggt
    12001 ggtgtggtcc gccgatttgg agagattcgc atagatggta ttggtgggca gcatctcctg
    12061 cccgccgaca accgggttct tgtctgcagc cagcaaagca gccgcagaga tcagcagaag
    12121 tactagaaac gaatatttgt gtttcatcat gtttgattgc ccttccgcaa gttcagcggc
    12181 tagtaatgga actggtagcg caactgcagt gacaccatgc gaggatcgct catgtgcgag
    12241 cccccaaacg agttgctgag atcgatagag taacgatggt cggtcagatt cgtcaccgta
    12301 agcttcgcgg acaaattctc cgagaacgta tgtccaaccg agaaatccac gctggcataa
    12361 gcaggcaggt gtcctggacc atcaccattc aggaaccctg aaccgaagga caagttgctg
    12421 gcaatccacg tccggaaggg cagggtgctg gtgacgccgg tgctaagcgt gtggcgctga
    12481 tcgtgatcga ggtagaagaa gccctcgggc ggtggctgaa attcagtgaa acctcccgtg
    12541 attgctcctg aaccctcaac cgactgatgc gaataggcaa gatgcacatc cattttcttg
    12601 aacagcttgg gcgagcgaac agtggcttcg tagccaacaa tgcgcgcggc ttcgatggtc
    12661 aaggggaaga acaggttcga gttgccgatg gcgtcatgat cgaaatagtt gtgagcgccg
    12721 gtgcggaact ggtcgagatc gacggtccag ccgcgaaccg ggatggtgag gccgaactcg
    12781 tgctgctcgt cgcgctctcc cttcagcggc aggaagccgg ctgcgggatc tgtggcctgc
    12841 agaatgctgt tcgagatggt gtcgagcgga ggcgcctggt agtagcggct gtacgctgcc
    12901 cgcaataccc agtgcagctt tggcacctga atggcgaggc cgagacgcgg gctgcttacg
    12961 ttttcggtga ctagtccatc aaaatgcgtg aatcgcaacc cggcattaaa ggtgagccat
    13021 gatgccgcct tgtactggtc ctcaatccac atggcttcca agcctgcgtt cgctttgacc
    13081 cgggtgggcg gaacattcac gggacccaga tccgggtcag ttccggtcaa cgcgaacagc
    13141 gtattgtcgt gctgggcaaa gccgtacatt ccggcgcggg cgttgtggcg tcctttcacc
    13201 acggccagcg tgacttcccc cccgtcgtat gaagacgctc gattatcggt ggccacgctg
    13261 cgatgaggca gatcgccagc gccctcaaac gccgcgcgat tgaagtgata agacggggcg
    13321 actgtaagca ggaccgactg gccaaaagtg tgcacccagg aaaagttgcc gaaaaaatcc
    13381 tgttcgcgtt cacgatcact gatgccaaga tcctgctgat cgggtgcgtt tgggacctgg
    13441 aagcgatcac cgcgggcaga acccacgaaa cgaagctgat cgtgcggggt ggcattcagg
    13501 atgagcgagg taaacccgcc ttcacctgaa gagtcgttgt gcaaattggt gatggtcggc
    13561 gtttccagcc catggtcaga gcggttgccg ctgagactga cgtaataagc tgaccgatcg
    13621 ttgtgatcgc cgaagctgag ctgattgtcc gtggtgttgt agttcccata gctgccaatc
    13681 aattcagcct ggcgcgagcg ctcaaagcca gtccgtgtaa tcacattgaa gttgccgtag
    13741 gtgcgatctc ccgattcagc ggagaagctt ccccgctgga cttccatgta atcaatgtcc
    13801 ttgggatcga actgcgggcc gatgttggtg gcaatattcg tattcggcac cggcacgccg
    13861 tcaatttccc acgtcacctg gtggccgccg cgcacatgaa gctggtcatg gactacggct
    13921 gctcccggaa cgaagttggt gatcatggcc atggaattcg tgcgatcagc tccgggggtt
    13981 tgcgcaattt cggtgcggct gaccacggtt tccggcgtgg aagagctcgg gttgacggtt
    14041 tgcggctcgg ctgtgacttc caccgcctcc tggtgggcgg caagcgcgag cgcgaaatgc
    14101 aattcctgga cgttatctga agttacagtg acagactgcg cgtccgcggc gaagcccggc
    14161 gaaagcactg ccacgtaata ctcgccaaca ggcagggtca ttaccgtgcc aatgccttca
    14221 tcattcgttt tggcgctctg cttgaacgat gatgtgcggc tctggacgac aacttcagcg
    14281 ccctgcaccg gacgatgctg cggatcgtga acaatgacct tcactgagcc gaatggggaa
    14341 gcagaggcag cggtgccgcc ggcaaaaaac attgcagcga tcatcaccag tgcagccggc
    14401 aaattcctgc ctgaccgacc acccagggga tgattgacgt tttgaaagct actccactcc
    14461 atggtttcta gtccttacgc atcgggggtg cgctgtttcg ggtaaatgtc gcggcctgga
    14521 acctgctctt ggaatcgggc aacaacttac gttgcgcctt gcacaagagc agttctcagg
    14581 aaatcaaagg caaggactat tgacgcggag gtccgcgatc cgtgtgcgac gagaaaccgg
    14641 ggctggtgaa tgtgaccgca acgtaaagca aactgcagtc agtgaccacc agaagaggaa
    14701 ggtaaaccga ggcggcaagc gctgttccgg cctgcggcgt gccctgcagg cagcaattca
    14761 tgggacagtc tttggggacg ttaacggcct gaatcgaggt tccatcgggc gccgagacgg
    14821 agtggtcttc catttcgtgg caatgatggt tatgggtttg agaatgcccg gaaatggcgg
    14881 cttgcatggg ctcacgatgg cattgcatcg gctgcaagga tcccatgtcc gccgcccata
    14941 ggggcgacgc cacggaaaac agcagcccca ccgccgtcag gatggagcaa acccgccgca
    15001 tactcattcg cgaatataac tctgtattct tcccgggagc aatgaaaatc ctctgaatgg
    15061 tcgattaaat tgtttaatta gagagtttta cagtacttcc gtaactctta agctatagag
    15121 tccggcgcgc cgagaaaggt tacatcgccg ttcgcctcgg agcggtcatg taaaagaaaa
    15181 ccgcaggcgt cactatcaga gaaagcacca tcgagatcag gattcctccg atcactccga
    15241 tcgcgagcgg ctggagcatc tgcgaaccag cccccagggc gaaggccagg gggagcattc
    15301 ccgcaaccga agccatagca gtcatgacga ttggcctgag ccggcggcgc ccagcctgga
    15361 tcatagcctc ttccggctcg aatcccgcat gctcaaactt gtgatgtgcg tccagcagca
    15421 ggatgccgtt tttggcgaca atgccgacca ccatgatgac tcccatgaac gacgcgacat
    15481 tgaaagttgt cctggtaacc agcagcgcaa ggaacacacc ggaggtagag agtagagcag
    15541 aagccaaaat tgccgtgggt gcagagaagc tccggaactc aaaaagcagg acggcaaaga
    15601 ccagcacgat agcgagcacc agaaccagca gcagatcacg aaatgacttc tgctgttcct
    15661 gataggtgcc cccgtattcc acacgaattg cagagggcag gtggagagaa tttacagcct
    15721 gtttgacctt gctgaccccg ctgcccaggc tcacaccctc
//
LOCUS       DASQYP010000276         2866 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_95459, whole genome shotgun sequence.
ACCESSION   DASQYP010000276 DASQYP010000000
VERSION     DASQYP010000276.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 2866)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2866)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2866
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_95459"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..184)
                     /locus_tag="VE783_08940"
     CDS             complement(<1..184)
                     /locus_tag="VE783_08940"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53566.1"
                     /translation="MACIVGLIILRAAASAGDDPTVKVKAEVTRLQQSLEKDPLRVAE
                     MPEIGKDVANYLKQAET"
     gene            complement(336..1112)
                     /locus_tag="VE783_08945"
     CDS             complement(336..1112)
                     /locus_tag="VE783_08945"
                     /inference="COORDINATES: protein motif:HMM:NF021604.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anti-sigma factor"
                     /protein_id="HYX53567.1"
                     /translation="MKDHTQYADSLALYAMHALDDPRELAELREHLGTCGECRRELEN
                     LWADTALLAFSAVGPQPPQRSRERLMKAIAAEPRRAIEQRSRFVLGRQPRWLSLAPIA
                     VALALAIISIGMLRDILRLRNKNEKLQAQLTDTIKQNELAREVYSMLADSQLQRMNLV
                     PVKAPSQPQIRTIYKPEKGHVLLLASGLQPTPDDKVYELWLLPADGGAPIAAGTFRND
                     GMMMHSFETAGIQAKGWAITMEPAPGGPTAKGPIVFAPPS"
     gene            complement(1109..1657)
                     /locus_tag="VE783_08950"
     CDS             complement(1109..1657)
                     /locus_tag="VE783_08950"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HYX53568.1"
                     /translation="MRVTGTQASQQDEAALLARIRAGDESAMAELYDRYSGVVYGVAL
                     RVLGSTASAEDLLQEVFLQLWRNPGAFDAERGRLAPWLAVIARNRSIDMLRRRPMEED
                     IDELPISTGINLEDEAGERMAIDKVRGVLAQLPQEQRKTLEMAFFEGMTHTEISAKLG
                     EPLGTVKTRIRSGLLALRKAFA"
     gene            2278..>2866
                     /locus_tag="VE783_08955"
     CDS             2278..>2866
                     /locus_tag="VE783_08955"
                     /inference="COORDINATES: protein motif:HMM:NF012955.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HYX53569.1"
                     /translation="MKIRSTTIFLCLLVLLSACALAQNLDFTVKRVAEGVYAAVGADG
                     GKAGSSAGFVVGTNGVIVVDTFTSEGPARDLLAEIRKVTSLPVRFVVNTHYHLDHTGG
                     NAVFAKEGATILAQRNLRGWLRTENLKFFGANPKPEQRAMVENLVLPDMVYSHAVDIF
                     LGTRTVQVRYMLGHTGGDSVVAVPDANVVFTGDLMW"
BASE COUNT          550 a          829 c          870 g          617 t
ORIGIN      
        1 ctgtttccgc ctgcttgagg tagttggcta catctttgcc gatctccggc atctcagcaa
       61 cccttaacgg gtctttctcc agcgactgtt gcagccttgt gacctcagcc ttgaccttta
      121 ccgtgggatc gtcgcctgcc gatgcggcgg cgcggaggat gatcagcccg acaatgcatg
      181 ccatcaggcg aaggaagttc agccttagag gagtttgagg tcgcatggag cagtcctttt
      241 gctggctgca gccttggacg ccgtttctca aacgaggtga gcgggaggaa atgcaactag
      301 atgattaatt cggagcatgc gtgacggaat gcattttagc ttggcggcgc aaaaactatc
      361 ggccccttgg ccgtgggacc gccgggcgca ggctccatgg tgatagccca gcctttggcc
      421 tgaatgccgg cagtctcaaa gctgtgcatc atcatgccgt cgttgcggaa agtgccggcg
      481 gcaatcggcg cgccgccatc ggcagggaga agccatagtt catacacttt gtcgtctggc
      541 gtgggctgca gtccgcttgc cagcagcaga acgtggcctt tttccggctt gtaaatcgtc
      601 ctgatctgcg gctgcgaagg cgctttcacc gggaccaggt tcatgcgttg gagctggctg
      661 tcagccagca tggagtaaac ttcgcgggcc agctcgtttt gcttaatggt gtccgtcagc
      721 tgcgcctgga gcttctcgtt cttgttgcga agacgaagta tgtcacgcag catgccgatg
      781 ctgataatcg cgagcgccag cgccacggcg atgggagcca gtgacagcca gcggggctgc
      841 cgtcccagca cgaagcggga gcgctgctca atggcccggc gcggttcagc ggcaatggct
      901 ttcatgagtc gctcgcgcga gcgctgcgga ggctgtgggc caaccgcgga aaacgcaagc
      961 agagcggtat ctgcccacag gttctccagt tcccggcggc attcgccaca cgttcccaga
     1021 tgctcgcgca actcagccag ttcgcgcggg tcgtccagcg cgtgcatggc gtagagcgcc
     1081 agcgaatctg cgtattgtgt gtggtctttc atgcaaaggc cttccgcagt gccagcaggc
     1141 cggagcggat gcgcgttttc accgtgccca gcggttcgcc gagtttggcc gaaatctcag
     1201 tgtgcgtcat gccttcaaaa aaagccatct ccagcgtctt gcgttgctcc tgcggcagct
     1261 gcgccagcac gccccgcact ttatcaatgg ccatgcgttc gccggcctcg tcctcgagat
     1321 tgattcccgt tgagataggg agctcgtcaa tgtcttcttc catcgggcgc cgccgcagca
     1381 tgtcgatgga gcgattgcgc gcgatgaccg ccagccaggg agccaaacgg ccgcgctctg
     1441 cgtcgaaagc tcccggattg cgccataatt ggaggaaaac ttcctgcaaa aggtcttccg
     1501 cggaagccgt actccccagc acgcgaaggg caacgccata caccactccg gaatagcgat
     1561 cataaagctc ggccatggcg ctctcgtcac cggcgcggat gcgcgcgagc agggcggctt
     1621 cgtcctgttg gctggcttgc gtgcctgtta cgcgcatcag tgctctttcc tttgcagtac
     1681 gtttatgccg attgaatgga ttttcaggac ggagctgcct cgggccggcc tctccggtga
     1741 ttcaacttaa gataacaata cctgctggga agagacaatc acagcttcag ccaatggggc
     1801 caaaccggct ttaaaacgtg cggcccttta cccggttggc acgcgccggt taagacgcag
     1861 ctgtgcggcc ggtcggcttt gtcatgctaa gattcaattc aatgtctcac ttccgggcct
     1921 ttttgctctg cttcctcgtt gtcacgtgtc tggttagctc cgcattagct tccgaaaaag
     1981 ttgagtggac cggctggatc agcgattcca aatgcggcgc tcgcatgacc ggctactgcg
     2041 ccaaggcatg cattaccgcg ggtgagaagc ccgtgttcgt gaccgaagac aagaaggtgt
     2101 gccaatcgcc aatcctgaac ggacaaagaa tctggaaggg gagcatgtgt ctgtgaaagg
     2161 aatggttaac gagggcgtcc taagcatcac agccatcgaa gcgcagcggg ttcgcaaata
     2221 gcggactgca cagcccagct gatcaccttt caacgctgcc gtgatacgct ttccggcatg
     2281 aaaatccgtt cgaccacaat ctttttgtgt cttcttgttc tgctcagcgc ctgcgcgctg
     2341 gcgcagaacc ttgacttcac cgtgaagcgc gtggctgaag gcgtttatgc tgccgtagga
     2401 gcagatggcg gcaaggccgg gagcagtgca ggtttcgttg tcggcaccaa cggggtgatc
     2461 gtggtggata cgttcaccag tgagggcccg gcgcgcgacc tgctggcgga gatccgcaaa
     2521 gtcaccagcc tgccagtccg ttttgtggtg aacacgcact atcaccttga tcacaccggc
     2581 gggaatgcgg tgttcgcgaa agaaggcgcg actatcctcg cgcagcgaaa cctgcgcggc
     2641 tggctgcgta cggaaaacct gaagttcttc ggcgccaatc ctaagcccga acagcgcgcc
     2701 atggttgaaa acctggtgct gccggacatg gtttacagcc atgccgtcga tatctttctg
     2761 gggacgcgca cggtccaggt gcgctacatg ctcggccaca ccggaggcga ctccgtagtt
     2821 gccgtgccgg atgcgaatgt cgtgtttacc ggcgacctga tgtgga
//
LOCUS       DASQYP010000277        15928 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_187941, whole genome shotgun sequence.
ACCESSION   DASQYP010000277 DASQYP010000000
VERSION     DASQYP010000277.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 15928)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15928)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15928
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_187941"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..230)
                     /locus_tag="VE783_08960"
     CDS             complement(<1..230)
                     /locus_tag="VE783_08960"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53570.1"
                     /translation="MKRIIQLGLALMGIFGASALSQAQNITFIPDLTPTAALPAPSMF
                     APPPALSPVMIRPVAKPAPCAKQYEPFDVDDY"
     gene            585..1385
                     /locus_tag="VE783_08965"
     CDS             585..1385
                     /locus_tag="VE783_08965"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53571.1"
                     /translation="MRAALSLVVFIVLTIACSTLTPAQPQVQAQTAYRHSSHSKSNKA
                     AEKQEPGKVVSARFALWETMQELRSRVGTPKQYFVPAVERLISPEEYDKYRDSYKKIY
                     DVFYRDTPVGLVRVLVAYGKDDSRSHLEPDIRVTHVFFIFDKNVTLRDALASIEEVRG
                     LCVGGCLLNGFAASAIAQPASPTEAQLVLAHKMQQQWQDEMPDATPGVQVFYRDSPFP
                     VDFEHSPVERIDLTLVSNANQEKYSIVVRKQEPTMLNVWHPKGVEARF"
     gene            1655..3967
                     /locus_tag="VE783_08970"
     CDS             1655..3967
                     /locus_tag="VE783_08970"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012546.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S9 family peptidase"
                     /protein_id="HYX53572.1"
                     /translation="MHRAARLLVSTLVVATALVASAQQKRSITEKDIFQFNWIGDPQI
                     SPDGSRVAFVKVSVDEKKTGYDTSIWVVPATGSEAPRRMTDGKHDSSPRWSPDGKWIA
                     FVRSPEQSGPPAPGTRPAGPQIYILPLGGGESWKVTDLPRGAGGPVWSPDSKWIAFTA
                     DANPEDLAKQKIGQKKPEAAADDKKDEKKTEAGPGAAKPAETPEAEHESDVRVITRSV
                     YRLNGPGYLDFKHPDHIWVIAAPQNSEDNVTPKQLTSGKFSENGPFWSNDGSKIYFTS
                     SRVDDPSYELPRTEIYSVAASGGEPQKILTIDMGAGELSLSPDGKRLAFCADVNQPVQ
                     SYTEPDLWVVDLAPDAKPRNLTTAYDRDVCSGVGGDQGTPRAGGGNKVIWSGDGTKLY
                     AVTADEGRANLMQFDAASGKMTPITRGNHDVSRFRATTDGSKFLVQISTPTTIGDLFW
                     IDSPGTEPRQITHINDKLFSQLNLTEPEEIWYTSFDGKKIHGWLQKPPDFDKNKKYPF
                     ILNIHGGPHAAYGWVFDHEIQWMAAKGYVVFYPNPRGSTSYGQEFGNIIQYHYPGDDF
                     KDLMAGVDEVLKRGYVDPKKLGVTGGSGGGLLTNWVIGHTDRFAAAVAQRDIASWAAW
                     WYSADFTLFQPSWFKAPPFDDPQDYVNRSPITYIKNVHTPLMLVLGEADWRTPPFSGG
                     EEMFRALKFLKRPVIMVRFPGESHELSRSGQPWHRVERLEHIVGWFDKYLQGIHKPEY
                     DDVGPAEVSTKPGETPGKQPPSTEPNPPKK"
     gene            complement(4066..4983)
                     /locus_tag="VE783_08975"
     CDS             complement(4066..4983)
                     /locus_tag="VE783_08975"
                     /inference="COORDINATES: protein motif:HMM:NF025910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HYX53573.1"
                     /translation="MNNFKKLVLLTCFSLCSAAFLVAQSSSQQDADALFSANKFQEAA
                     LAYQQIVAKEPGNGVAWQSLGESYLRLKKFSEARNAFMQSGQHGYAPLMNRVNVARAY
                     AAEGNSAEAFKALQALAETGKAAGLRGYISSRAEFASLKDTPGYKTLIEALAPCQTGA
                     FHHFDFWIGDWEVQNPAGQKVGDNLVTREQEGCLLVEHWKSAQGVETGTSFNYYDIRD
                     KKWHQIYIANNGNAGAFPAMAGELTDNRMVLITDEKQSPVFRWTWYVLSPGKVRQMAE
                     QSNDGQKTWQTVWDSVYVSKTNAASARAD"
     gene            complement(4984..5772)
                     /locus_tag="VE783_08980"
     CDS             complement(4984..5772)
                     /locus_tag="VE783_08980"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53574.1"
                     /translation="MTRFWFFLATLVVGVRGVSAQPAKSAESAPQRVLVGDPQINGTG
                     FKPYKNLWRTRLTHPDGKTLEMGSWSDLLTADKLNGREVLRRTQISLTPEAFTMTINT
                     FDAHTLAPISTDWGPVGPDGGISPERHFHRDFNGSQIHVHVVSPQVPSGVRDDQTKLE
                     TAPFDFYGGMYGLILAALPLKEGYSGTFPSVLEFQEKQDWVSFRVAGKERLDAGQKGA
                     VETWKIDATTAFGKMYFWITQEPPYIIKLVNVTPKGDTWSWEMV"
     gene            complement(5785..6690)
                     /locus_tag="VE783_08985"
     CDS             complement(5785..6690)
                     /locus_tag="VE783_08985"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53575.1"
                     /translation="MTVPLLLILSLSMVLRAQGAPAAAAMPTMEQANQLFTEKNWAAA
                     EKAFAAVTQSEPANKLAWLRLGTCRQNLRQYELALEAYRHIDNDPSQIGLSALYREAA
                     SLARLNQKANAIVALNKAVDAGLARPEMFKAEADFASLQQEPAFNALLERADAIAHPC
                     SHAPEHRQFDFWIGEWEVVTTEGHNPAGTSSIQLILDRCVLLENWTGGLTGKSFNHYD
                     TRSKKWIQDWVDSQSKSVHFEGGLENGVMSFYAASFDGNNQPIRRHLQFMKVDDDHVR
                     QWSQQSHDGGKTWTPEYDFTYIRKK"
     gene            6924..8684
                     /locus_tag="VE783_08990"
     CDS             6924..8684
                     /locus_tag="VE783_08990"
                     /inference="COORDINATES: protein motif:HMM:NF012485.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53576.1"
                     /translation="MKWLSVILAISLCLGTAAGAKDKSGLSKKEQQLAESEFKKAVDL
                     QNSGKIEEALVAATHASQIDPKKMEYLMAKQVLIQQIVGKFMDEGNRLAAAGDNAGAM
                     ANFREALARDPQNSYAQQRLRDVMPPEDPDKQHVMQLLASVEDINLTPAVGKKNVRLG
                     PDTRAAWNAIGQAFGVTFTFDQSITSRPLNMNLEGVDFYEATAFLARVTKTFWSPVTA
                     REAIVANDNQEMRTAYERISVRTFYIGNVSAATDLTDLANVMRTIFDMKFLSVEASRN
                     TITVRAPRTQIAAVTSMLEGLMEAKPEVLIEVQEFEYDTDKSAAYGIALPTDFTIFNV
                     PSEIRRVLGANAQPVIDQLNRTGTIDPSKIDPTTLQNLAGSPLLAPFVFFGKGLGLTG
                     ITVSGVKIQLSGTWSSASTVERANMRAMDGEAVTFRIGDKFPIVNGNFTTVAFNTRGQ
                     VQSGNTPQFTFVDLGLTLKTTPHYHSDGSIRLDLDFELLGIGTAQVNGIPDLTTRSFK
                     GNITVTDGEPSVLMGAVTDQELKSTNGYPGIGQLPGFSTVLNSNTRDHSHNEIVIVVT
                     PHVIRKPFHDKGSSVFWSLN"
     gene            complement(8694..9602)
                     /locus_tag="VE783_08995"
     CDS             complement(8694..9602)
                     /locus_tag="VE783_08995"
                     /inference="COORDINATES: protein motif:HMM:NF024853.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin domain-containing protein"
                     /protein_id="HYX53577.1"
                     /translation="MKWMAVLLVLASAALAGAQAQPAKHSTTHAPGTAHPSSPPPILL
                     PSNKQIDESMQRVFGYDPGVSWNILDIRESSIAGLAEVTVSVNKGQPYHLFVSTDTQT
                     AIVGQLLPFGPNPYESTRQKLKAADGPSLGAKSPVIEMVEFSDLQCPHCKAAAPIVEK
                     LVNDFPQIKLVFQQFPLPASLHPWAMKAAQYADCAGRENPQAFWKYVDAVFENQGSIA
                     LATADDKLKELATASGLNADQLSACSTSTQTEARISKSMDLGRALDVTGTPTIFLNGR
                     NVQGIADIPYDQLKRLVQFEIDHAGK"
     gene            complement(9648..11288)
                     /locus_tag="VE783_09000"
     CDS             complement(9648..11288)
                     /locus_tag="VE783_09000"
                     /EC_number="6.3.5.1"
                     /inference="COORDINATES: protein motif:HMM:NF010588.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003952 - NAD+ synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0009435 - NAD biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD+ synthase"
                     /protein_id="HYX53578.1"
                     /translation="MKIALGQINPTIGDFSGNSKKIIESARNARSAGAEMALFPELAV
                     CGYPPRDLLEKPAFVARNQQVIQEIAQAVPDVTIVTGFASPAAVETGKSVMNSAAVLR
                     DGRVQFVQSKMLLPTYDVFDELRYFHPADSQRLIGFANKQLALTICEDAWNDKHFWHR
                     RLYSVDPVDELIRAGANLVVNISASPFHVGKRELRFKMLQTIAVDNKVPVAFVNQVGG
                     NDSLIFDGSSCVIAPDGKVVAQAKSFEEDLIVFDSETLSGEMHPQLEGDEASVYAGLV
                     LGTRDYVRKCGFTKAIIALSGGIDSALTAAIAVDALGPENVIGVGMPSQYSSEGSVKD
                     ARELACKLKIRFELVPIGEIFDCYRKALASVFAGLAEDVAEENIQSRIRGNIVMAMSN
                     KFGSLVLTTGNKSELGVGYCTLYGDMVGGLGVIADVPKTLVYRLSEYVNSRKSVIPES
                     TMTKPPSAELRPGQLDSDTLPPYEILDNILEDYIEDYRTAEQIASDRGYDLNLVRRVI
                     KMIERSEYKRQQAAPGLKITPKAFGFGRRFPIAQKSEI"
     gene            complement(11335..12480)
                     /locus_tag="VE783_09005"
     CDS             complement(11335..12480)
                     /locus_tag="VE783_09005"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53579.1"
                     /translation="MRAQEPQNKPAESKPAPDVFVIKAPEPPPSPPVQKPALTAQQLE
                     SRPPLNDGTKMQLIQLLDAEMVHTRKMLPLGDKSTIIGPDGQVKPGDAALFELAQSRG
                     AAARIGDKVQITNISIKEKMVYVEINGGPKKKSKWYDHISIGMGAGGGMNSTDPNQAA
                     ATGSAVTLQFSKHVPEMTGEELKKLLSPVLDFGVKTAAEVYIDTMPPKVKAAMKNHEV
                     LVGMNKDMVIMAKERPQQRTREKDEAGNEYEEWIYGQPPQDVVFVRFKGENVVQVKTA
                     KVGGEMLVKTEKEVDVHDGVVTLAALQASSSPQDVKPVSPEEEARAKAPRPTLHRQGE
                     DGSDVQKVSRQPIPVGADGHPDEPQWGQDKGGSGSSQPAGSENKPPR"
     gene            complement(12663..13703)
                     /locus_tag="VE783_09010"
     CDS             complement(12663..13703)
                     /locus_tag="VE783_09010"
                     /inference="COORDINATES: protein motif:HMM:NF020133.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53580.1"
                     /translation="MPEKTTAKATAGETVIAHAPCRVDLAGGTMDIWPLYLFHPGAVT
                     VNFAVNVLTRCRISRLPGKQIRFNSLDTGRQEEFASFDELCGTKRFRHPLAAYLTRFF
                     APEGGLEIETNSESPAGAGISGSSALMIATTAALARWTGRELGLEKIREIAQNVEAQL
                     IRVPTGCQDYYPALYGGVSAIHLEPDGIHHQGVRVAAEELDRRFVLAYTGAPRQSGIN
                     NWEVFKSHINGDKKIYRNFERIAEIARAMHDAVALADWKNVAMLLREEWKLRKTNAPR
                     ITTALIEKLIRAATQNGAEAAKVCGAGGGGCVVFLTSPEARERVAEAIRTNGGQVLPA
                     RVARYGLTVSGE"
     gene            complement(13707..14660)
                     /locus_tag="VE783_09015"
     CDS             complement(13707..14660)
                     /locus_tag="VE783_09015"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: protein motif:HMM:NF004344.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009317 - acetyl-CoA carboxylase complex
                     [Evidence IEA];
                     GO_function: GO:0003989 - acetyl-CoA carboxylase activity
                     [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase carboxyltransferase
                     subunit alpha"
                     /protein_id="HYX53581.1"
                     /translation="MDPAVKAQRQLESMEKQIVDLEAKAGADEEKHLQLKHLHHQVSF
                     LRDQIRQHINAWQKTELARHAQRPYTLDYVERLFSDWSEIHGDRSYGDDPAIVCGLAR
                     YHGDEVMVMGHQKGRDTKQRVYRNFGQANPEGYRKALRCMKLAEKFGRPIFTFIDTPG
                     AYPGLGAEERGQAEAIAHNLREMARIEVPIITTITGEGGSGGALAMAVSDRVFMMENT
                     VYSVISPEGCASIMWRDASKKEIAAQALRITAPDLSEMKIIDEIIPEPDGGAHSDHDA
                     AAALVDQVLRRHYDTLKAMPARELVDARYEKFRRMAQFYTE"
     gene            complement(15013..>15928)
                     /locus_tag="VE783_09020"
     CDS             complement(15013..>15928)
                     /locus_tag="VE783_09020"
                     /inference="COORDINATES: protein motif:HMM:NF013499.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="OB-fold nucleic acid binding domain-containing
                     protein"
                     /protein_id="HYX53582.1"
                     /translation="RFTSIYEFCEKVDLRLLNRRVIESLVKAGAMDAFGNRAQLMAVL
                     DKAMERAQKTQRDAEMGQHGLFGVFADDAQQQNGNGDKLPNVPEWDEHQRLASEKEVL
                     GFFITGHPMEKYADKLQDFHALTTEHICQMKNGTGRDEITTAGVISGVRVMKSRKGDL
                     YANAVLEDMTGTVEAIVFPEAYKRLQNVLKQEVAMLVKASVRVEEGSNPKVAISTLTP
                     LEEATPKLPRSIRVRVPLDSSSEGTIDALHSLCRERKGDAKVLFDLDRTGDFMVVMEA
                     DGYNVCPDRSFIARVEELCGRGAVRVID"
BASE COUNT         3285 a         4714 c         4419 g         3510 t
ORIGIN      
        1 ttatagtcat ccacatcgaa cggctcatac tgcttggcgc agggcgccgg tttcgccacc
       61 ggtcgaatca tcactgggct cagcgcggga ggtggagcaa acattgacgg agcaggaaga
      121 gcggctgtag gggtcaggtc cggaatgaat gtgatgttct gggcttgaga cagcgctgaa
      181 gcgccgaaaa tccccatcag tgccagcccg agttggatga ttctcttcat ctctggtcga
      241 ttgccagtcc ttggcccggg cccgataaga ccccgctact ttacccacct tcagcgggtc
      301 aggttagatt acttttgctg ctgaccagcc ctgctttttc ggccaacaca ttgttaagac
      361 acaggttgct ttactacgga acagattctt acgaggttaa ttcttgtaaa taaattacta
      421 agggacatgt acctgagaat cagatgcctg attgcattgc tcaacgcaaa ggctcattgg
      481 caggagttcg acttgcgcag cccctcatct caggcgcaaa cttgaggaca cacgccgggc
      541 ggcgcgaagc ttgctgctcg ccgcctgcaa aaagggcact tgttatgcgc gctgctctct
      601 ccctcgtcgt ctttatcgtg ctcacgattg catgttccac actcacgccg gctcagccgc
      661 aggtacaggc gcagacggcc tatcggcact catcgcattc taaaagcaac aaagcagcgg
      721 aaaagcagga accaggaaaa gtcgtatcgg cgcggttcgc gctctgggaa accatgcaag
      781 agctgcgcag ccgtgtggga acgccgaagc aatattttgt tccggcggtg gagaggctga
      841 tctccccaga agagtacgac aagtaccgcg attcgtataa gaagatctac gacgtcttct
      901 atcgtgacac cccggtgggc ctggtacgag tgctggtggc gtatggaaaa gacgattcgc
      961 gctcgcatct ggagccggac attcgcgtta ctcacgtctt tttcatcttc gacaaaaacg
     1021 tgacgctgcg cgacgcgctg gcttccatcg aagaagtgcg cggcctctgc gtcggcggat
     1081 gcctgctgaa tggctttgcc gcaagcgcga ttgcgcaacc ggcctcgccc acagaagctc
     1141 agcttgtgct cgctcacaag atgcaacagc aatggcagga tgaaatgccc gacgccacgc
     1201 cgggcgtgca ggtgttctat cgcgatagtc cttttcctgt cgacttcgag cacagcccgg
     1261 tcgagcgtat tgacctgacc ctggtaagca atgccaacca ggagaagtac agcattgtgg
     1321 taagaaagca ggagcccaca atgctgaatg tgtggcatcc gaaaggggtt gaggctcgtt
     1381 tctgaaatcc cgaatccccg gcgttctttg ccggtgtgag ggaaccccta ttgcccccaa
     1441 aggtctgaga agctgcccat gaatgatcca atcgggtaac acgcgttgtg ctacacagct
     1501 aacgcttctc gaggccgaaa tctttcgtgc ttagggattt cttccctggc aaaagagccg
     1561 gggattgggg gcttcgatgt tcccatgaca tcccagtttc tagacaagcg gcgtcccgag
     1621 tcgtataaaa gttagttttc caaggagccg caacatgcat cgtgccgcac gtctgctcgt
     1681 cagcacgctc gtcgtcgcca ctgcgctggt cgcttcggcg caacagaagc gttcgatcac
     1741 cgagaaagat atctttcaat tcaactggat cggcgatcca cagatctcgc cggacgggtc
     1801 gcgggtggca tttgtcaaag tgtccgtgga tgaaaaaaag accggctacg atacctcgat
     1861 ttgggtggtg cccgcgaccg gcagtgaagc gccgcgccgc atgacagatg gcaagcacga
     1921 ttcttcgcct cgctggtcgc cagacggaaa gtggattgcc tttgtgcgca gcccggagca
     1981 gagcgggcct ccagcgccgg gcacgcgtcc tgcaggaccg caaatttata ttctgcctct
     2041 tggtggcggt gaatcgtgga aagtcacgga cctgccgcgc ggagcgggtg ggccggtgtg
     2101 gtcgccggac agcaagtgga tcgcgttcac cgccgatgcc aaccctgagg acctggccaa
     2161 gcagaaaata ggccagaaaa agccggaagc tgcagccgat gacaaaaaag atgagaagaa
     2221 gacggaagcc ggtcccggag cagccaagcc ggcagagacg cccgaagcag aacatgagag
     2281 cgacgttcgc gtgatcacgc gttcggtcta ccggctgaat gggccggggt atctcgactt
     2341 caaacaccct gaccacatat gggtgattgc agcgccgcag aattctgaag ataacgtcac
     2401 gccaaagcag ctcacgtcag gcaagttttc agagaatggg ccgttctggt ccaatgacgg
     2461 tagcaaaatc tacttcacca gctcgcgcgt tgacgatccg tcttatgagc tgccgcggac
     2521 ggaaatttac tcggtggccg cgagcggcgg cgagccacaa aaaatcttaa ccattgatat
     2581 gggtgcgggc gaactctcgc taagtccgga cggcaagcgc ctggccttct gcgctgacgt
     2641 gaaccaaccg gtgcagtctt acaccgagcc cgatctctgg gtggtggatc ttgcgcctga
     2701 cgccaagccg aggaacctga ccaccgctta cgatcgcgac gtgtgcagcg gcgtgggcgg
     2761 cgatcagggg acaccgcggg ccggtggcgg caacaaagtc atctggtccg gcgacggcac
     2821 caagctttac gccgtcaccg ccgacgaagg ccgcgcaaac ctcatgcagt tcgacgctgc
     2881 ttcgggcaag atgacaccca ttaccagggg taatcacgat gtctcgcgct tccgggcaac
     2941 cactgacggc tccaaatttc tggttcagat ttccactccc acaaccatcg gcgacctttt
     3001 ctggattgac agccccggaa cagagccgcg ccagattacc cacatcaatg acaagctgtt
     3061 ttcacagctc aacctcaccg agccggagga gatctggtac accagcttcg acggcaagaa
     3121 gatccatggc tggttgcaga agccgccgga cttcgacaag aacaagaaat atccattcat
     3181 cctgaacatc catggcggcc cgcacgcggc atacgggtgg gtcttcgatc acgaaatcca
     3241 gtggatggcg gccaaaggct atgtcgtgtt ctatcccaac ccgcgcggca gcacctccta
     3301 cggacaggag ttcggcaaca tcattcagta tcactacccg ggcgacgact tcaaagacct
     3361 gatggccggc gtggacgaag tgttgaaacg aggctacgtc gatccaaaga agcttggtgt
     3421 gaccggaggc agcggtggcg gattgctcac caactgggtg attggccaca ctgaccgttt
     3481 tgccgcagcc gtggcccagc gcgacatcgc gagctgggca gcctggtggt actccgcaga
     3541 cttcacgctc ttccagccat catggttcaa agcaccgcct tttgatgacc ctcaggacta
     3601 tgtgaaccgc tcgccgatta catacatcaa gaacgtgcat acgccgctca tgctggtgct
     3661 gggtgaagct gactggcgta cgcctccatt cagcggcggt gaggagatgt tccgcgctct
     3721 caagttcctg aagcgcccgg tgatcatggt ccgtttccca ggcgagtcgc acgaactctc
     3781 gcgctccggg cagccatggc accgcgtgga acgactggaa cacattgttg gctggttcga
     3841 taaatatctt cagggcatcc acaagccgga gtacgacgat gttggcccgg cggaggtgag
     3901 cacaaagccg ggagagacac cggggaaaca gccgccctca acggagccca acccgccgaa
     3961 gaaataggtg atgggtgtgc tgtttcgaac agaggagaag gccgctacct tctcctctct
     4021 tgttttgcaa atctcgcagt cttcggaaac gctcgatgga gttagctaat ccgctctcgc
     4081 gctggcggca ttcgttttac tcacgtagac cgagtcccaa acagtctgcc aggttttctg
     4141 gccatcattg gattgttccg ccatctggcg cacctttccg ggagagagca cgtaccatgt
     4201 ccagcggaac acaggcgact gcttttcgtc ggtgatcaag accatcctat tgtctgtgag
     4261 ttctccagcc atggcgggaa atgcgccggc attaccgttg ttcgcgatat agatctggtg
     4321 ccacttcttg tcgcgaatat cgtagtagtt aaagctggtg ccggtttcga caccctgggc
     4381 gcttttccag tgctccacca gcaggcagcc ctcctgctcc cttgtcacaa gattgtcccc
     4441 gactttctgt cctgcggggt tctggacttc ccagtcccca atccagaaat cgaagtggtg
     4501 aaacgctccg gtctggcagg gcgcgagcgc ttcaatcagg gttttgtagc cgggagtgtc
     4561 tttcaaggac gcaaactcag cgcgcgaaga gatgtagcca cgcaggccgg ctgcttttcc
     4621 ggtctccgca agcgcctgca gggccttgaa ggcctccgcg ctatttccct ccgcggcata
     4681 ggcccgggcg acgttgacgc gattcatcag cggagcgtag ccatgctggc ctgactgcat
     4741 gaaggcattt cttgcttcag agaacttctt gagccgcaga tacgattcgc caaggctctg
     4801 ccaggccacc ccattgccgg gctctttcgc cacaatctgc tgatatgcca gtgcggcttc
     4861 ctggaactta ttcgcggaaa acagcgcgtc agcatcctgc tgggatgaag attgtgcaac
     4921 aagaaaggca gcgctgcaga gcgagaagca agtaagaagc acgagctttt tgaagttatt
     4981 cattcagacc atctcccatg accaggtatc gcccttcgga gtgacgttga cgagcttgat
     5041 aatgtacggc ggctcctgcg tgatccagaa atacatcttg ccgaacgccg tcgtggcatc
     5101 aatcttccat gtttccaccg cacctttttg cccggcatcg agccgttcct tgccggctac
     5161 acgaaagctg acccagtcct gcttctcctg aaactccagc acagaaggga aggtgcccga
     5221 atatccttct tttagcggca gagcggcaag aataaggccg tacatgccac cgtagaaatc
     5281 gaaaggagcg gtttccagtt tggtttggtc atcgcgaact ccgctcggta cctgcggtga
     5341 aaccacatga acatggattt ggctgccgtt gaagtcgcga tggaagtggc gctccgggct
     5401 gattcctccg tcaggaccaa ccggtcccca atccgtggag atcggggcaa gcgtgtgagc
     5461 atcaaatgtg ttgatggtca tggtgaaagc ctctggggta aggctgatct gcgtccgtcg
     5521 caacacttct cgcccgttga gtttgtctgc agtgagcaga tcactccagc ttcccatttc
     5581 gagcgttttc ccatccgggt gagtcaagcg cgtgcgccaa agatttttgt aaggcttaaa
     5641 tccagttcca ttgatctggg gatctcccac cagcacacgc tgaggcgcag attcggctga
     5701 tttcgcgggc tgggctgaga ctccgcgaac accgactacc aatgttgcca ggaaaaacca
     5761 aaatctggtc acagaaggtc tcctctattt cttgcggata taggtaaagt cgtactcagg
     5821 agtccaggtc ttgcctccat catgcgattg ctgcgaccac tggcggacgt gatcgtcatc
     5881 aaccttcatg aattgcaaat gacggcggat cggttgattg tttccatcaa acgaggcggc
     5941 gtaaaagctc atcacaccgt tctccagacc accttcgaag tgaacgctct ttgactggct
     6001 gtctacccag tcctgaatcc acttttttga gcgagtgtcg tagtgattga agctcttgcc
     6061 ggtgaggccg cctgtccaat tttcgagcag gacgcaccta tcgagaatga gttgaatgct
     6121 gctggttccg gcaggattgt ggccttccgt ggtgaccacc tcccactcgc caatccagaa
     6181 atcgaactgg cgatgttcag gcgcgtgcga acagggatga gcaatagcat cggctcgctc
     6241 cagcagtgcg ttgaacgcgg gctcctgctg aagggacgcg aaatcagctt cagccttgaa
     6301 catctctggc cgggcgagac cggcatccac cgccttattg agtgcgacga tggcatttgc
     6361 cttttggttc agtcgcgcga gcgacgccgc ctcccggtac agggcggaga gcccaatctg
     6421 agaagggtca ttgtcgatat ggcggtaagc ctccagagcc agttcgtact gccgcaggtt
     6481 ctggcggcag gttcccagcc gaagccacgc gagtttgttg gccggttcgg actgtgtaac
     6541 agcggcgaag gccttttccg ccgcagccca attcttttcc gtaaacagct ggttcgcctg
     6601 ttccatggtg ggcatcgcgg ctgccgccgg ggcgccttgc gcacgcagaa ccatagatag
     6661 agacaggatc aggagcaacg ggaccgtcat tcttaatcca aaaggcattc tgtgagttcg
     6721 agacgctggc ggtgccgatt cagggatttt tgacgcgaag tcgcacgctt tgtaagctct
     6781 gaacgcgtgg ctttgtgacg ggcagcacct tttcgccgcc cgcggccgtt cttccaacag
     6841 attcgccgaa aaaactaagg taaccggcgc aaaataactg agtttccgcc gttccaagta
     6901 aaggtaaaat caaagtttcc gcaatgaagt ggctttccgt aattctcgcg atctctctct
     6961 gccttggcac ggctgccggc gcaaaagaca agtccggact ttccaagaaa gagcagcaac
     7021 tggctgagtc tgagttcaag aaggcggttg acctgcaaaa cagcggaaag atagaagaag
     7081 ccctggtggc cgccacgcac gcgtcgcaaa ttgaccccaa gaaaatggaa tacctgatgg
     7141 ccaagcaggt cctcatccag caaattgtgg gaaagttcat ggatgaaggg aaccgcctgg
     7201 ccgcggcggg cgacaatgcg ggtgcgatgg caaacttccg cgaggcgctg gcgcgcgatc
     7261 cgcaaaacag ctacgcccag cagcgactgc gagatgtgat gccgccggaa gatccagaca
     7321 agcagcatgt tatgcagttg ctggcctcag tggaggacat caatctgacg ccagctgttg
     7381 gcaagaagaa cgtgcgcctg gggccggata cgcgagccgc ctggaacgca attgggcagg
     7441 cttttggggt gaccttcacc tttgaccagt ccatcaccag ccgtccgttg aacatgaatc
     7501 tggaaggagt ggatttttac gaagccaccg cgtttcttgc acgcgtgacg aaaaccttct
     7561 ggtcgcctgt aaccgcccgc gaagcgattg tggcgaatga caaccaggag atgcgcaccg
     7621 cttatgaacg catctcagta cgtacctttt atatagggaa cgtctccgcc gcaaccgatc
     7681 tcaccgatct ggccaacgtg atgcggacga ttttcgacat gaagttcctc agcgtagagg
     7741 cgagccgaaa taccattaca gtgagggcgc cgcggacgca aattgccgcc gtgaccagca
     7801 tgctggaagg cctgatggaa gcgaagccgg aagtgctgat cgaagtccag gagtttgaat
     7861 acgatacgga caagtccgcc gcttacggga tagcactgcc cacagacttt accatcttca
     7921 acgtcccttc agagatcagg cgagtgctgg gcgcaaatgc gcagccggtg attgaccagt
     7981 tgaaccggac tggaacgatt gatccgagca agattgatcc gaccacgctg cagaaccttg
     8041 caggctcacc gttgctggcg cccttcgtgt ttttcggcaa gggactggga ctgaccggta
     8101 tcacggtctc tggagtcaag atccagcttt ccgggacatg gtcttccgct tcaacggtgg
     8161 agcgggcgaa catgcgcgcc atggacggag aggccgtcac gttccgcatt ggagacaagt
     8221 tcccgattgt gaacggaaac ttcactacag tcgcgtttaa cacgcggggc caggtgcagt
     8281 ccggaaacac accgcagttt acgtttgtgg acctggggct cacgctgaag accacgcccc
     8341 actatcattc ggatggttcg atccggctgg acctggactt cgagttgctt ggtattggga
     8401 ccgcccaagt caacggtatc cccgatctca ccacgcgcag tttcaaagga aatatcacgg
     8461 taacggatgg agagccctca gtcttaatgg gggcagtcac agatcaggag ctgaagtcta
     8521 cgaatggcta ccctggtatt gggcagctgc ccggattttc taccgtgctc aacagtaata
     8581 cgcgcgacca ctcgcataac gaaattgtga ttgtggttac acctcacgtg atccgtaagc
     8641 cgtttcacga caaaggttcg agcgtgttct ggagcctgaa ctagcctgct gcgctacttg
     8701 cccgcgtgat caatttcaaa ctgcaccagc cgcttgagct gatcgtaagg aatgtcagcg
     8761 attccctgaa cgttgcgacc gttcaggaag atggtgggag tgccggttac atcgagcgct
     8821 ctccccaggt ccattgattt gctgatccgg gcttcggttt gtgtgctggt agaacaggca
     8881 cttagctggt cagcgttgag gccggacgcg gtagcgagct ctttcagctt gtcatcggct
     8941 gtcgcgagcg caatggagcc ctggttttca aaaacggcgt ccacatactt ccagaatgcc
     9001 tggggatttt cccggcccgc acaatcggcg tactgtgctg ccttcatggc ccatggatgc
     9061 aacgaagcag gaagagggaa ctgttgaaag acaagcttga tctgcgggaa gtcattcacc
     9121 agcttttcca cgatcggtgc cgcggccttg caatgtgggc attgcagatc actgaactcc
     9181 accatttcaa tgacgggtga ctttgccccg agactcggcc catcggcagc tttgagcttt
     9241 tggcgcgtac tttcatacgg gttgggacca aaaggcagca gctgtcctac gatggcggtc
     9301 tgcgtatctg tgctcacgaa caggtgataa ggctgaccct tgtttactga gaccgtgact
     9361 tccgcaagac cagcgatgga agactcacga atatcaagaa tgttccagct gacgccggga
     9421 tcgtaaccga agacgcgctg catggattca tcgatctgct tgttactggg cagcaatatt
     9481 ggcggcgggc tggaaggatg ggcagtgccg ggtgcgtgag ttgtgctgtg ttttgcaggt
     9541 tgggcctgcg cgccggcgag agcggcagag gcaagtacaa gcaagacggc catccatttc
     9601 attttgttca tgtcctcggg gtgatgttct cggagtttcg gttcggatca gatctctgat
     9661 ttttgcgcga ttgggaagcg gcgcccgaac ccaaatgctt ttggcgtgat cttgagcccg
     9721 ggcgcggcct gctggcgttt gtattcgctg cgctcgatca tttttatgac tcggcgcacc
     9781 aggttgagat catagccgcg atcagaggcg atttgttcgg ctgtccgata gtcctcaata
     9841 tagtcttcca gtatgttgtc caggatttcg taaggcggaa gtgtatcact atccaactgg
     9901 ccgggccgca gctcagcgga cggcggcttc gtcatggtgg attccgggat caccgacttg
     9961 cgcgagttca cgtattcgct caggcggtag accagggttt taggcacatc ggcaatcacg
    10021 cccagcccgc ccaccatgtc gccgtagagg gtgcagtagc ccactcccaa ttcggacttg
    10081 ttcccggtag tgagcacaag gctgccaaac ttgtttgaca tggccatgac gatatttccg
    10141 cggatccgcg attgaatgtt ctcttccgcc acatcttccg ccagccccgc gaacactgac
    10201 gcaagcgctt tgcggtagca gtcaaagatc tctccaatgg gtacaagctc aaagcggatc
    10261 ttcagcttgc aggcaagctc gcgggcatct ttcacgctac cttccgaaga atactggctt
    10321 ggcatgccca cgccgatgac gttttccggg cccagcgcgt caacggctat ggccgccgtc
    10381 aatgctgaat caatccctcc gctcagtgcg atgatcgcct tggtaaagcc gcacttgcgg
    10441 acataatcgc gcgtgcccag aaccagccct gcgtacacgc tggcttcgtc gccttcaagt
    10501 tgcggatgca tctcaccgct aagtgtttcg ctgtcgaaaa cgatcaggtc ttcttcgaac
    10561 gacttcgcct gcgcaaccac tttgccatcc ggcgcgatca cgcagcttga gccatcgaat
    10621 atcaggctgt cgttcccgcc cacctgattc acgaatgcga ccggcacttt gttgtcgacg
    10681 gcgatcgtct gcagcatttt gaagcgcagc tcgcgctttc ccacatggaa tggcgaggcc
    10741 gagatgttca ccaccaggtt ggcgccggcg cgaataagct catcgacagg gtccacgcta
    10801 tacagcctgc gatgccagaa atgcttgtcg ttccaggcat cttcgcagat ggtcagcgcc
    10861 aactgcttgt tggcaaaacc aatcagtctc tgtgaatcgg ccggatgaaa atagcgcagc
    10921 tcatcgaaaa cgtcataggt tggcagaagc atcttcgact gaacgaactg tacgcggccg
    10981 tcgcggagaa ctgccgccga gttcatcacg ctcttgccgg tttccacggc ggccggcgat
    11041 gcgaacccgg taacgatcgt tacgtccggg actgcctgcg caatctcctg gatcacctgt
    11101 tgattgcgtg cgacaaaggc aggtttttcc agcaggtcgc gcggcggata tccacatacc
    11161 gccagttcgg gaaagagcgc catttcagcg cctgcgctgc gggcgttgcg ggcagattct
    11221 atgatctttt ttgaattgcc gctgaaatca ccaatggtag ggttgatctg ccccagagca
    11281 atcttcacaa atccagttta aaccccggga ttcgcagttc gccagcacct taccttaccg
    11341 cggaggtttg ttctcagacc ctgcgggctg tgaagatccg gaaccacctt tatcctggcc
    11401 ccattgcggt tcatctggat gtccatctgc tccaacggga atcggctgcc ggcttacctt
    11461 ctgaacgtca gagccatctt cgccctggcg atgtaacgtt ggacggggag ccttggcccg
    11521 cgcctcttcc tcgggcgaaa ccggtttcac gtcctggggt gacgagcttg cctgcagcgc
    11581 agccagcgtc actacgccat catgcacgtc aacttctttc tctgtcttga cgagcatctc
    11641 gccgccgacc tttgccgtct tcacctggac cacgttctcg cccttgaacc tgacaaagac
    11701 cacatcctgc ggcggctgcc cgtaaatcca ttcttcgtac tcgttgcctg cctcgtcctt
    11761 ttcccgcgtg cgctgctgcg ggcgctcctt ggccatgatc accatgtcct tattcatccc
    11821 gacaaggact tcatggttct tcatcgccgc tttgaccttc ggcggcattg tgtcaatgta
    11881 cacttcagcg gcagtcttca ctccgaaatc cagtaccggg ctgagcagct tcttcagctc
    11941 ctcaccggtc atttccggaa catgtttaga gaactgcagc gtcactgcgg aaccggtggc
    12001 cgcggcctgg ttcggatcgg ttgagttcat accgccgccg gcgcccatgc cgatgctgat
    12061 gtggtcatac cacttcgact ttttcttggg gccgccgttg atctcaacat agaccatttt
    12121 ttctttaatc gagatattcg tgatctggac cttgtcgccg atcctggctg ctgcgcccct
    12181 gctctgcgca agctcgaaca gcgcggcatc accgggtttc acctgaccgt ccgggccaat
    12241 gatcgtgctc ttatcgccca gcggcagcat cttgcgtgta tgcaccatct ctgcatccag
    12301 caactggatg agctgcatct tggtgccatc gttcagcggc ggacgagatt ccagctgttg
    12361 tgccgtaagc gccggcttct gcacgggcgg cgatggcggt ggttccggtg ccttgatcac
    12421 gaaaacgtct ggcgcaggct tgctttcggc cggcttgttt tgcggctctt gcgcacgcat
    12481 gaggctcgtg gcaaggaata ttacggccaa agggacaagt gcacggcgaa acatgatgag
    12541 gcacctttta agctggctat tctgtaattc tccgccgaaa tcctgcgcat ttcaacaaag
    12601 ttccggcgtt cctcaaattt agatgccttt ccgccagcca gcgcggctcc cggagaaggc
    12661 cattattcgc cgctcaccgt aagcccgtaa cgggctaccc gggccggtaa aacttgcccg
    12721 ccattggtgc gaatcgcctc cgctactcgt tcgcgggcct ccggcgaggt gaggaaaacc
    12781 acgcacccgc cgccgcccgc gccgcacacc ttcgccgcct cagcgccgtt ctgcgtggcc
    12841 gccctgatta gtttttcgat cagcgcagtg gtgatcctgg gcgcattggt cttgcgcagc
    12901 ttccattctt cgcgaagcag catggctacg ttcttccagt ctgccagcgc taccgcgtca
    12961 tgcatcgcgc gggcgatctc cgcaatcctc tcgaagttcc ggtaaatctt tttgtcgcca
    13021 ttgatgtgcg acttgaagac ctcccagttg ttgatccccg attggcgcgg cgcgcccgta
    13081 tatgccagca caaaacgccg gtccagctct tccgccgcca ccctcacccc ctggtgatgt
    13141 attccatccg gctccagatg aatggcgctc acgccgccgt acagcgccgg ataatagtcc
    13201 tggcatcctg tgggcacgcg gatgagctgc gcctccacgt tttgcgcgat ctcacggatc
    13261 ttctccagcc cgagttcgcg tccggtccag cgcgccagcg ccgcagtcgt cgcgatcatc
    13321 agcgccgacg aacccgatat ccccgcgccc gccggagact ccgagttcgt ctcaatctcc
    13381 agcccgcctt ccggcgcgaa gaagcgcgtc aggtatgcgg ccagcggatg ccggaacctc
    13441 tttgtcccgc aaagctcgtc aaagctcgcg aactcttcct gtctgcctgt atcgagcgag
    13501 ttaaacctga tctgctttcc tggtagacgc gaaatccggc accgcgtgag cacgttcacg
    13561 gcaaagttca ccgtcacggc cccaggatga aacaggtaca acggccaaat atccatggtg
    13621 ccgccggcca gatccacgcg gcacggcgcg tgcgcaatca ccgtctctcc ggcggtagct
    13681 ttagctgtcg ttttttcggg caaggtctat tccgtgtaga actgcgccat gcggcggaat
    13741 ttttcgtagc gggcgtcaac cagctcgcgc gcaggcattg ctttcagagt gtcatagtgc
    13801 cggcgcagca cctggtcaac cagggcagcg gctgcatcat ggtcactgtg tgcgccgccg
    13861 tcaggctcgg gaatgatttc gtcaatgatc ttcatttcac tcaagtcagg cgcggtgatc
    13921 cgcagcgcct gcgcggcaat ctctttcttt gaagcatcgc gccacatgat cgaagcgcag
    13981 ccctccggag aaataacgga ataaaccgtg ttctccatca tgaacacgcg atcagaaacg
    14041 gccatcgcca gcgcgccgcc gctgccgcct tcgcctgtaa tggtagtgat gatcggcact
    14101 tcaatccggg ccatctcgcg cagattgtgc gcaatcgctt cggcctggcc gcgctcttcc
    14161 gctcccagcc ccggatacgc tcccggcgta tcaataaagg tgaagatcgg ccggccgaac
    14221 ttttccgcca gcttcatgca ccgcagcgcc ttcctgtagc cttccggatt cgcctggcca
    14281 aagttgcgat acacacgctg cttggtgtca cggcccttct ggtggcccat caccattact
    14341 tcatcaccgt ggtaacgcgc cagcccgcag acgattgccg gatcgtcacc gtatgagcgg
    14401 tctccgtgga tctcactcca gtcgctgaac aaccgttcca cgtagtccag cgtgtacggc
    14461 cgctgcgcat gccgcgccag ctccgtcttt tgccaggcat tgatgtgctg gcgaatctgg
    14521 tcacgcaaaa aactcacctg atggtgcagg tgcttgagct ggagatgctt ctcctcatca
    14581 gcgccggcct ttgcttccag gtcgacgatc tgcttctcca tgctctcgag ttgccgttgc
    14641 gctttgactg ccgggtccaa atgcgttctc cgaactttct tttgacagct gctagctcgt
    14701 agcttctagc ggctagcctt acattcaatc tttcgcgact gtcgcccgcg atcgatttta
    14761 cgaactgtcg gcgcggtcga ctttcaaaac ttataaaaca ttctcacgcg ttgtcatcct
    14821 gtgtgacgcc gcagaagcga agcgacgaag gcgaagtcga aggatcccga ggatgcttca
    14881 gtagcccatg ccgatccagg gagttctcac gagaatctcg atcccttttt cttgccatga
    14941 ccattcagcc gcggtctcac tgaaccaagc tagcagctag aagctagcag ctcgtcccca
    15001 aacctctccc actcagtcga taacgcgtac cgctcctctt ccgcacaact cttccacgcg
    15061 cgcaatgaaa gagcgatctg gacacacatt atatccgtcg gcttccatca ccaccatgaa
    15121 gtcgcccgtg cggtccaggt cgaacaatac cttcgcgtct cctttccttt cgcggcaaag
    15181 cgagtgcagc gcatcgatgg tgccttcgct gctggaatcc agcggaaccc tcacccggat
    15241 cgaccgtggc agcttcggcg tggcttcttc cagcggcgtc agcgtgctga ttgccacctt
    15301 cgggttcgac ccctcttcca cgcgcacact cgccttcacc agcatggcca cttcctgctt
    15361 cagcacgttc tgcagccgct tgtaggcttc ggggaagacg attgcttcca ccgtgccggt
    15421 catgtcttcc agtaccgcgt tcgcgtaaag gtctcccttg cgcgacttca ttacgcgcac
    15481 gccgctgatc acgcctgccg tggtaatctc gtcgcggccg gtgccgttct tcatctggca
    15541 tatgtgctcg gtcgtgagcg cgtggaaatc ctgcagcttg tccgcgtact tctccattgg
    15601 atggccggtg ataaagaagc ccagcacttc cttctcgctg gccagccgct ggtgctcatc
    15661 ccactccggc acgttgggca gcttgtctcc attgccgttc tgctgctggg cgtcatcggc
    15721 aaacacgcca aacagcccgt gctggcccat ctcggcatcg cgctgcgttt tttgcgcccg
    15781 ctccatggct ttatcaagga cggccatcag ctgtgcgcga ttgccaaagg catccatcgc
    15841 gcctgccttc accagcgact caatcaccct ccggttcagc agccgcaggt caaccttctc
    15901 gcagaactcg tatatagagg tgaaacgc
//
LOCUS       DASQYP010000278         2030 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_11411, whole genome shotgun sequence.
ACCESSION   DASQYP010000278 DASQYP010000000
VERSION     DASQYP010000278.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 2030)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2030)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2030
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_11411"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..222
                     /locus_tag="VE783_09025"
     CDS             <1..222
                     /locus_tag="VE783_09025"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53583.1"
                     /translation="IIFASNLADTKSARGFDLYIINVDGTKQERVTFYPDFDSFPMFS
                     SDGKRLVWASNRNGKEPHETNIFIADWVD"
     gene            complement(256..1134)
                     /locus_tag="VE783_09030"
     CDS             complement(256..1134)
                     /locus_tag="VE783_09030"
                     /EC_number="1.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF015411.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050661 - NADP binding [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HYX53584.1"
                     /translation="MKIAFIGLGSMGAAMARNLLNAGHQLTVYNRTRSRADELLAAGA
                     RIADTPAQAAEKAEIAITMLADDHALEDTVFGDNGLMKTLPQGSIHAGMSTVSVAISR
                     RLTEAHTNKGQHYVAAPVFGRPDAAAAAKLFIVAAGDQQQIERLQPVLAAMGQKTFIA
                     GPDQQMANVVKLAGNFLITSVIESMAEAFALGRKFNIQPAQLLEIFTNSLFPAPVYKN
                     YGGMIAAERFEPAGFKLKHGAKDNRLVLAAAEEVSVPMPTASLVRDHFVSAVAQGMAD
                     IDWAAIAKLVYQNAGL"
     gene            1308..1964
                     /locus_tag="VE783_09035"
     CDS             1308..1964
                     /locus_tag="VE783_09035"
                     /inference="COORDINATES: protein motif:HMM:NF016240.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YceH family protein"
                     /protein_id="HYX53585.1"
                     /translation="MEIVLSPVEARVLGALIEKDITTPDYYPLSLNALVNACNQKNNR
                     EPVMSLDENAVRDALYTLQEKRLAGPAGGADSRVTKYEHRIQEVFNFTRAETAVVDVL
                     LLRGPQTPGELRGRSERMFRFEELSDVQATLQKLMQRTPPLVKMLPRQPGTKEARYAH
                     LLSGDVEGFEPPPDAASSAVIAGADPERLERLESEVAELRRELGDLKQQMESFRRQFE
                     "
BASE COUNT          427 a          555 c          635 g          413 t
ORIGIN      
        1 atcatttttg cctccaacct ggcggacaca aagagcgcgc gcggcttcga tctctacatc
       61 atcaacgtgg acggcaccaa gcaggagcgc gtaactttct atccggactt tgattcgttc
      121 cccatgttca gctctgacgg aaagaggctg gtctgggcgt caaaccggaa cggcaaggag
      181 ccgcacgaaa cgaatatctt tattgcggat tgggtggact gagtgcagaa gccggtggaa
      241 tgccggctct gccgattaca aaccagcgtt ttggtagacc agtttcgcga ttgcagccca
      301 gtcaatgtct gccatgcctt gggcgacggc cgaaacgaag tggtcgcgca ccagactcgc
      361 cgtgggcatg ggcacggaaa cttcctcggc cgctgccagc accagacgat tatctttggc
      421 accgtgcttg agcttgaaac cggctggctc gaatctttca gccgcgatca tgccgccgta
      481 atttttatag accggagcgg gaaacagcga gttggtgaag atttcgagca gttgcgccgg
      541 ctggatattg aacttgcggc cgagagcgaa cgcttctgcc atggactcga tcacgctggt
      601 gatcaggaaa ttgccggcga gcttcaccac attggccatc tgctgatcgg gaccggcaat
      661 gaatgtcttc tggcccatgg cagccaagac gggctgcaga cgctcgatct gctgctggtc
      721 gcccgcagcc acgatgaata acttggcagc ggcggccgca tccggacgtc cgaacacggg
      781 tgcggccacg tagtgctggc ctttatttgt gtgcgcttcc gtcaggcggc gcgatatggc
      841 aacactgact gtgctcatac ccgcatggat tgagccctgc ggaagagttt tcatgaggcc
      901 gttgtcgcca aagacggtgt cttccagggc gtgatcgtcg gccagcatgg taatggctat
      961 ctcagccttt tcggcggctt gggccggcgt atcggcaatg cgagcacctg cggcaaggag
     1021 ctcatcggcg cgactgcggg tgcggttgta aaccgtgagt tgatgtccgg cgttcagtaa
     1081 gttccgcgcc atggcggcgc ccatgctgcc caacccgata aatgcgatct tcaatggttt
     1141 ctccctgtgg cgtctatatg acggatcgac tgctgttcca atgcagttga tgatcaacgg
     1201 cccggaaagg atgaaaagat cccgcgaatt cgttcagcca agttgggtca cttagaggcg
     1261 gccaccatga tcgatgaagc ttgacggcat tcgatagact agctgccatg gaaattgtgc
     1321 tcagcccagt ggaggcgcgc gttctgggcg cgctgatcga aaaggacatc accacgccgg
     1381 attattatcc tctctccctg aacgcgctgg tgaatgcctg caaccagaag aacaaccgcg
     1441 aaccggtgat gagcctggat gagaacgccg ttcgggatgc gctctacacg ctccaggaaa
     1501 agcgtttggc ggggccggcc ggtggagctg acagccgggt gacgaagtac gagcatcgca
     1561 tccaggaagt gttcaacttc acgcgcgcgg aaaccgccgt tgtggacgtg ctgttgctgc
     1621 gcggcccaca gacgccgggg gaattgcgtg gacgcagtga gcgcatgttt cgctttgaag
     1681 aactttctga tgtgcaggca acgctgcaga agctgatgca gcgcacgccc ccgctggtga
     1741 agatgctgcc gcgccagccc ggaaccaaag aagcccggta tgcgcatttg ctctcgggcg
     1801 atgtggaggg atttgaaccg ccgccggacg ctgcctctag cgctgtaata gccggagcgg
     1861 atccggaacg gctggagcgg ctggaaagtg aagtggcaga attgcggcgg gagctcggcg
     1921 atctgaagca gcagatggag agcttcaggc ggcagttcga atgagaatgg ccgctcgttt
     1981 ttgactaatc aaccacgaca gtcgcactga acgggcgttc ccagacgagc
//
LOCUS       DASQYP010000279         4608 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_11478, whole genome shotgun sequence.
ACCESSION   DASQYP010000279 DASQYP010000000
VERSION     DASQYP010000279.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 4608)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4608)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4608
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_11478"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..656)
                     /locus_tag="VE783_09040"
     CDS             complement(<1..656)
                     /locus_tag="VE783_09040"
                     /inference="COORDINATES: protein motif:HMM:NF028007.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FHA domain-containing protein"
                     /protein_id="HYX53586.1"
                     /translation="MATAPSTLPKPACLSIEVGGQHRRVDVTAVPFSIGRSEDCNASI
                     PDVRVSRRHAQIVQEDGHLVIVDSGSRHGTFVNGVRCDRATLISRDEITLGVPGVRIL
                     FLDESQSQNLSSAYLTRLASSSDVSELEKLRLFLEAARSLNSGLVLQDVLRNMLEYAL
                     RLTKAERGFIYLRDKSQTPALTCGLNSQGASLLDDADVSRSVINDAIHSASEFISGDV
                     "
     gene            812..2929
                     /locus_tag="VE783_09045"
     CDS             812..2929
                     /locus_tag="VE783_09045"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: protein motif:HMM:NF017464.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008237 - metallopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M13 family metallopeptidase"
                     /protein_id="HYX53587.1"
                     /translation="MTSDRMFPFSATLLLCFLASAFQLFAQNPQNPAQAEKPGIANPV
                     LNVDEKPLTSLPYTPSLDVQSMDKSADPCVDFYQYSCGGWMKNNPIPPDQAAWSVYAK
                     VHQDNQRFLWGVLDDLAGKTTGRTPAQQKIGDYFSACMNEPAIEKAGAAPLKASLAQI
                     AALKSKKDLAALLAGEHLQGENGFFGFGSDQDFANSNDVIAFAVAGGLGLPDRDYYTK
                     TDAKSVELRRKYVAHVEKMLRLVGDSPAAAKAEAQTVLRIETALARASLTRVEQRDPH
                     NLFHKMDRKQLQALTPLFDWNAYLSASGVDSVDKFNVTEPKFYQELNRQLQANTLADI
                     KTYLRWHVARSNAPFLSSKFVNENFDFYRRTLRGVQQLPPRWKRCVGLVDEQLGEALG
                     QEFVNRAFSEDMKKRTMEMTRQIEQAMQEDLEQLTWMGPETKKQALEKLHSVVNKVGY
                     PDKWRDYSAVAINRDDFLGNVHRAAQFEEHRQLNKIGKPLDRGEWGMTPPTVNAYYNA
                     QMNDINFPAGVLEPPLYDIKLDDAPNYGNTGATIGHELTHGFDDEGRQFDAKGNLRDW
                     WTKQDAEQFEKRANCVVDQYAKYVIVDDIKINSKLTEGEDVADLGGTILAWIAWKAAD
                     KGQKLEDRDGLTPDQRFFVGFAQWACENNRPENLRVSAITNPHSPGKYRINGVVINMP
                     EFQQAFQCKAGQPMVREDRCRVW"
     gene            2923..3693
                     /locus_tag="VE783_09050"
     CDS             2923..3693
                     /locus_tag="VE783_09050"
                     /inference="COORDINATES: protein motif:HMM:NF015866.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005507 - copper ion binding [Evidence
                     IEA];
                     GO_process: GO:0055070 - copper ion homeostasis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="copper homeostasis protein CutC"
                     /protein_id="HYX53588.1"
                     /translation="MVAQPQIRPGSVLLEICLDSVESAVNSERGGADRVELCAGLTEG
                     GTTPSAGMIAAVRQSIKIGLQVMVRPRGGDFCYSADEFSIMRRDILIAKQLGANGVVF
                     GILNTDGAIDKERMRELLELARPLKVTCHRAFDMSSDLAQALSDLMEIGVDRVLTSGG
                     RRSAIDAMPVLAELTRQAQGRISVMACGELSKTNVKAVIKYTHVSEVHAGLPTTVTSS
                     MKFRNQKIAMGTLADAEYAHNVVTEASVRDLRMAIDQV"
     gene            complement(3736..>4608)
                     /locus_tag="VE783_09055"
     CDS             complement(3736..>4608)
                     /locus_tag="VE783_09055"
                     /inference="COORDINATES: protein motif:HMM:NF014717.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HYX53589.1"
                     /translation="TESSGDLSAEVIRISPDYFRVIQTPLVEGRFFTQDDENGKLPVA
                     IIDEATAKHYWPDRDPVGRRLRMRLRFGQNPVNPWSTVVGVVKYIKHDGLDVDGVPHI
                     YVPLNQFLGRSLSLALRTSLPVSTLEPQIRGAIQSVDSGLPVFGVTSMDEIVDASLAS
                     RRFSANLVVGFAGLALLLGSIGIYGSLAYMIGQRSHDIGLRLALGAQRADVVRLVMGK
                     GLVLAGLGIVAGVIFSASTASTMASLLYGVRPHDPAVFLVAPLLLLIVALLASSIPAW
                     RATKLDPIAALREV"
BASE COUNT         1017 a         1397 c         1337 g          857 t
ORIGIN      
        1 ctcacgtcgc cggagataaa ctctgaggcg gaatgaatgg cgtcattgat cacggagcgg
       61 gaaacatccg catcatcgag caatgaggct ccctggctgt tcaaaccgca cgtgagagcc
      121 ggggtttggc tcttgtcacg caggtagata aacccgcgtt cggctttggt gaggcggagc
      181 gcgtattcca gcatgttgcg cagcacgtct tgcagcacca gaccgctgtt caggctgcgc
      241 gcggcttcca ggaacaagcg cagtttttca agttctgaaa catcagagct gctggccagc
      301 cgcgtcaggt acgcgctgct caggttctgt gactgactct catccaggaa caggatgcgc
      361 acgcccggta cgccgagggt aatttcgtcg cggcttatca aagttgcgcg gtcgcaacgc
      421 acgccattca caaacgttcc gtgacggctg ccgctatcca cgatcaccag gtgcccgtcc
      481 tcctgcacaa tctgtgcatg ccggcgcgag acccgcacgt cagggatgct ggcgttgcag
      541 tcttccgaac ggccaatgga gaacggcacc gcggtcacgt ccacacggcg atgctgaccg
      601 cctacctcta tgctgaggca ggccggtttc ggaagtgttg aaggtgcagt ggccatacag
      661 ttttcctggg ctgttgctgg ccggcctgaa tcgggtgaat gggagcagtt caggcctttt
      721 gcccgattat agccgcatct cgcctccgcc attcacgcaa atcgctttct tcctttagac
      781 tgattcgttt gattctctct cgagggcatt catgacttct gatcgcatgt tcccattctc
      841 agccaccctg ctgctctgct ttttggcttc agccttccag ctgtttgcac aaaatccgca
      901 aaatcccgca caggcggaga aacccggcat cgccaatcct gtgctgaatg tggacgagaa
      961 gccgctcacc tcgttgccct acaccccgag ccttgatgtt cagtccatgg acaagtcggc
     1021 cgatccctgc gtcgacttct atcagtactc ctgtggtggc tggatgaaaa acaatcccat
     1081 tccgcccgac caggctgcct ggagcgttta tgccaaagtc catcaagaca accagcgctt
     1141 cctgtggggc gtgctggacg atctggccgg aaaaactaca ggccgtacgc cagcgcagca
     1201 gaagatcggg gactattttt ccgcctgcat gaacgagccg gccattgaga aggcaggtgc
     1261 tgcgccgctc aaggcttcgc tggcgcagat cgcggcattg aaatcaaaga aggacctggc
     1321 cgcgctgctc gcgggtgagc acctgcaagg agaaaacggc ttcttcggct tcggctctga
     1381 ccaggacttc gccaactcta acgacgtgat tgccttcgcc gtggccggcg gcctggggct
     1441 gccggaccgc gactactaca caaagacaga cgccaaatcc gtggagcttc gccgcaagta
     1501 tgtggctcac gtagagaaga tgttaaggct ggtcggcgac tcgcccgcgg ccgcgaaggc
     1561 agaagcgcaa actgttctcc gcattgagac cgctctggcg cgcgcctcac tcacccgggt
     1621 ggagcagcgc gatcctcaca acctgttcca caagatggac cgaaagcagc ttcaggcgtt
     1681 gacgcctctt tttgactgga acgcctacct aagcgcctcc ggcgttgact cggtggataa
     1741 gttcaacgtt acggagccga agttctacca ggagttgaat cgtcagctcc aggccaacac
     1801 actggccgat atcaagactt acctgcgctg gcacgtcgcg cgcagcaacg cgccgtttct
     1861 ttcgtcgaag ttcgtgaatg agaactttga cttttatcgg cgcaccctgc gcggcgtgca
     1921 gcagcttcct ccgcgctgga agcgctgtgt ggggctggtg gacgagcagc tgggcgaggc
     1981 gcttgggcag gaatttgtca atcgcgcatt cagcgaagac atgaaaaagc gcaccatgga
     2041 aatgacccgg cagatcgagc aggccatgca ggaagacctg gaacagctca catggatggg
     2101 cccggaaacg aagaaacagg cgctcgagaa gctgcattcc gtggtgaaca aagtcggcta
     2161 tccggacaag tggcgcgact acagcgccgt ggccatcaat cgcgatgatt tccttggcaa
     2221 cgtacatcgt gctgcgcagt ttgaggagca ccggcagctc aacaagatcg gcaagccgct
     2281 cgatcgcggc gaatggggca tgactccgcc caccgtaaat gcctattaca acgcgcagat
     2341 gaacgacatc aacttccctg ccggagttct tgagccgcct ctctatgaca tcaaactgga
     2401 cgacgctccg aactacggca acaccggcgc caccattggc cacgagctta cgcacggctt
     2461 tgacgacgaa ggccgccagt ttgacgccaa aggcaacctg cgcgactggt ggaccaaaca
     2521 ggacgccgag cagtttgaaa agcgcgccaa ctgcgtggtg gaccagtacg caaagtacgt
     2581 gatcgtggac gatatcaaga tcaacagcaa actcaccgaa ggcgaggacg tggctgacct
     2641 cggcggcacc atcctggcgt ggattgcctg gaaagccgct gacaaaggcc agaagctcga
     2701 agatcgtgac ggactcacgc cagaccagcg cttcttcgtt ggctttgccc agtgggcctg
     2761 cgaaaacaac cgtccggaaa acctgcgggt cagcgccatt accaatccgc actctccggg
     2821 caagtaccgc atcaacggcg tggtcatcaa catgccggag ttccagcagg cattccagtg
     2881 caaggcgggg caaccgatgg tgcgcgagga ccgctgccgg gtgtggtagc gcaaccgcaa
     2941 atccggcccg gcagcgtgct gctggaaatc tgcctggact cggtagagtc ggccgtgaac
     3001 tctgagcgcg gcggcgctga ccgtgtggag ctttgcgccg gcctcaccga aggcggcacc
     3061 acgcccagcg cgggcatgat tgccgccgtg cgccagagta tcaagatcgg gctgcaagtc
     3121 atggtccgcc cgcgtggcgg cgatttctgc tacagcgcgg acgagttcag catcatgcgg
     3181 cgcgacattc tcatcgccaa acagctgggc gccaatgggg tggtcttcgg catcctgaac
     3241 actgacgggg caatcgacaa agagcgaatg cgcgagctgc tggagctggc gcgcccgctc
     3301 aaggtcacct gccatcgcgc gttcgatatg tcctctgacc tcgcgcaggc gctaagtgac
     3361 ctgatggaaa tcggcgtgga ccgcgttctc acctccggcg gacgccgcag cgccattgat
     3421 gccatgcctg tgctggccga gttgacgcgc caggcacagg gacgcatctc cgtgatggcg
     3481 tgcggcgagc tttccaagac caacgtgaag gcggtgatca aatataccca tgtgagcgag
     3541 gttcacgcgg gcctgccgac aacggtcaca agttccatga agttccgcaa ccagaagatc
     3601 gccatgggta ccctggccga cgccgagtac gcgcacaacg tggtgacaga agccagcgtg
     3661 cgcgacttga ggatggcgat tgatcaggtg tgaggtggaa aatctgaaga atagaatgcg
     3721 ccgtagccag caccttcata cttcccgaag cgcggcaatt gggtctagct tcgtagctcg
     3781 ccaggcggga atagagctgg ccagtagagc gactatgagc aagagtaaag gcgccaccag
     3841 aaatacagcc ggatcatgtg ggcgaacgcc gtaaagcaag cttgccattg tcgaggcggt
     3901 ggaagcggaa aatatcacac cggccacaat accgaggcca gccaggacca gacctttccc
     3961 cataacaagt cgcacgacat ccgctcgctg ggcccccaac gccaaacgca gaccaatgtc
     4021 gtgtgatctt tggccaatca tataggccag cgagccgtaa attccgatgg agcccagcaa
     4081 gagcgccaac cccgcaaatc ccaccaccaa attcgccgaa aatctgcgcg atgccagcga
     4141 ggcatccact atttcatcca tcgaggtgac gccgaacacc ggcagccctg aatccacgct
     4201 ctgaatcgcg ccgcgaatct gcggctccag cgtgctcacg ggcaacgaag ttcgcaaagc
     4261 caggctcagc gaccgcccga gaaattgatt cagcggaaca tagatgtgcg gtacgccatc
     4321 gacatcgagc ccgtcgtgct tgatgtattt caccacgccc accacggtgc tccatggatt
     4381 cacaggattc tgcccgaaac gcaaccgcat acgcaggcgc cggcccaccg gatcacggtc
     4441 cggccagtag tgcttagccg tcgcctcatc gatgatcgcc acgggcagtt tgccattttc
     4501 atcgtcctgg gtgaaaaagc ggccttccac cagcggtgtt tgtatcaccc gaaaataatc
     4561 cgggctgatg cggataactt ccgcgctcaa atctcccgag gattccgt
//
LOCUS       DASQYP010000280         7895 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_188069, whole genome shotgun sequence.
ACCESSION   DASQYP010000280 DASQYP010000000
VERSION     DASQYP010000280.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 7895)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7895)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7895
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_188069"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..186
                     /locus_tag="VE783_09060"
     CDS             <1..186
                     /locus_tag="VE783_09060"
                     /inference="COORDINATES: protein motif:HMM:NF014453.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar transferase"
                     /protein_id="HYX53590.1"
                     /translation="HTVRPGVTGWAQIKYQYGSSVEDAKRKLELDLFYIKHLSVSLDL
                     AIIFETVKVVLLGKGAK"
     gene            226..870
                     /locus_tag="VE783_09065"
     CDS             226..870
                     /locus_tag="VE783_09065"
                     /inference="COORDINATES: protein motif:HMM:NF014606.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA];
                     GO_function: GO:0015159 - polysaccharide transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide biosynthesis/export family
                     protein"
                     /protein_id="HYX53591.1"
                     /translation="MVTRRILIAGLMLASVIAASAQKRSAALNATSSNVAETKADIPL
                     TQQTLPNIKPSEYKVGEADVLHINVWKEPEVSQTVVVRTDGSISLPLINEVKVNDLTP
                     LQIQDLVADKLKNFLTNPQVTVTVTEIHSKRAFITGEVPRPGVYSLNTETTVLQLIAQ
                     AGGLTPFAKRGDIVVLRFENGKQQRLKFKYKDVVSGKNTQQNITLQPGDTVVVP"
     gene            867..2282
                     /locus_tag="VE783_09070"
     CDS             867..2282
                     /locus_tag="VE783_09070"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53592.1"
                     /translation="MRNGKKLRTAILVMLACLAPGTGVVFAQSAPASQQSATPTPTPA
                     PSPSSESQDPGVVLQPVSGGTGPYSVSLGTGQLIGVGPEGNTEFAGGAGLAHGQAAEF
                     KNLFYYGTSASTVYSNALDPAHPQDYVFSSSFSPYLAVVMPTRTGSFVAQYTATVNPN
                     DTANGDPQAFHVANLKLQGAFTRRWSWQLQTSGSYGSESARFQAPLNYVVVQSTPVVS
                     SNSAILLRTTNSSYGESDVHLGWRASSRDDMGWTFRHTYTGIAGDPGDPQSSGTHSNS
                     VGLRMDYGRTLNSRVVMTLYGEGDSLLDGPTCNSIGGGVGFAVKVSHSVALDVGGGPQ
                     RNSNSCGGQQNYNFNGNLVANVRWRTRLFVSAQRLFSTAYRTDGVWEDNASAGFSKDF
                     KRLNVTTDAGWVRGEPFLGTTQRYDGYFVSPRIRIRATEALALTAGYRSFHATGGAIV
                     SGNESFAVAGIEWYPAGVHFK"
     gene            2301..3845
                     /locus_tag="VE783_09075"
     CDS             2301..3845
                     /locus_tag="VE783_09075"
                     /inference="COORDINATES: protein motif:HMM:NF025179.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNVR domain-containing protein"
                     /protein_id="HYX53593.1"
                     /translation="MNQGTTNNGVDQLLAFWTTVRHYRGWIFLGTVFFALIGSTLIFL
                     MPDHYKASTTILVDPQKVPEKYVSPTVSSDPGQRLTTITQQVLSTTRLQQIIEHQSLY
                     PKLQGKLSREEIVELMRKDITLTVKQGSSNGLSAFTIEYEGDDRMAVANVANELASSF
                     IDWNVKNREQQAVDTTEFLSAQLKEAKQNLEEQERKVSAFKMAHLGEMPEQQAGNLQA
                     LSQLQVQLQANADALNRLEVERTLLTRGLDPASTSSGISRATPVTERGRLEAERRDLK
                     ATLTDLRRRYTPNHPEVKDASDRLARLEEQIKALPPDPPVTADTNDNTAVSVRLQLVD
                     REQKRLAEEQKRITNQIASYRTRVDAVPVREQQMAELNRNYSVSKEHYQSLLDKTFSA
                     EMAADLERKQQAEHFTIVDKAQVPERPFKPKRRMMLLGAVLGAFFFSVGIAYAKDMFN
                     PTFKIERELRAVLPANVPVMASIPKLECGADRRKSFRFAVIAVILATAGCTLEFLLYV
                     KLHPIL"
     gene            3904..5472
                     /locus_tag="VE783_09080"
     CDS             3904..5472
                     /locus_tag="VE783_09080"
                     /inference="COORDINATES: protein motif:HMM:NF024832.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="oligosaccharide flippase family protein"
                     /protein_id="HYX53594.1"
                     /translation="MSALKTFYRHSSHYLGGRVAVMMLGFISFPLFTRVFSVAEYGEM
                     SLIMNTVLLLTVMSKFGFQHAVQRYYPEYASSPDPTALSRYYATLFYGTGFIALTLCA
                     LFLIAVPFGATQFLGITANGALMLALILVVVRSLRSMQMNLMQMENKTRLFNGVDILA
                     KALIIATICFFLFFWKKSIFSFFLGTVIVETAFLLQYMPFLSRRGLLSIQVFNPEFFR
                     SAVMFAFPLMTAEISWVVLDSGDRFFVQHYLGAQSLGFYAAAYGIATYLQDVMMAPLQ
                     LALFPICMKLWTNKGKAETQEFLSRSLDHFAMVAVGVVSVFMVASRDVIVLLASKKFQ
                     EAHRLIPYLVIGLVLSAVTVYFRPGLLIHKKASKIATATLGASILNVALNIALLPRIG
                     LLGAAIATTVSYGAIVVFLAWESLRVLPFKIEWIAFVRYVVAGSAVAYAATYLPVQKP
                     LLNAICKGTFVVTLYAAVLWVTDVRVRKLISRAYQIGSRQIRQLGKQPPVTPMAPLAA
                     PAPAPVEEEIAVNQ"
     gene            5488..6849
                     /locus_tag="VE783_09085"
     CDS             5488..6849
                     /locus_tag="VE783_09085"
                     /inference="COORDINATES: protein motif:HMM:NF016800.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="O-antigen ligase family protein"
                     /protein_id="HYX53595.1"
                     /translation="MNLHFGLEGYVPLTLYLSAIAAFVLSVFWKPQAGLYFLIPLLPL
                     QTVRYRLMDYPLGNKLIDIILLGVVLGTVLKGGFKFVKTPMNRVLVLYGLFCYLQLWR
                     GTFFINSELPLSISDPRFSDWKNYMVLFILFGIVASTIKTVRQIQIVVLLLCISAFLV
                     DKGYYGNMSGRDLTHFSYEVRDGGPLGYAGVNGVATYVAEFMLFLLGLMAYERKKLRK
                     AVMWGVLALGGYCLLFSFSREAYAGVLVGAVVLGLLKQRWVLLAVLAFLLSWQSLVPT
                     SVQERVLMTYDKNDQQLDTSAQDRVTLWNDAMDMFQQNPAIGIGFDTYKWLHRVSIYT
                     DTHNYFLKVLVETGVFGLLFFLWVLIKMSRMGLQLFRSAKDPFLKSLGLAFTLMMACV
                     FVVNFFGDRWLYIEVNGALWVTLACVVRGQMIVNESEASQTQPETTAESEPEMMAEEP
                     AYV"
     gene            6879..>7895
                     /gene="asnB"
                     /locus_tag="VE783_09090"
     CDS             6879..>7895
                     /gene="asnB"
                     /locus_tag="VE783_09090"
                     /EC_number="6.3.5.4"
                     /inference="COORDINATES: protein motif:HMM:TIGR01536.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004066 - asparagine synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_process: GO:0006529 - asparagine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="asparagine synthase (glutamine-hydrolyzing)"
                     /protein_id="HYX53596.1"
                     /translation="MCGIFGKIGSSPADEKCGLELKHRGPDDGGLKYFVVPELSVWVS
                     LQQRRLSIIDLSSAGHQPMCNEDESVWIIFNGEIYNFQELRQELIAEGHTFRSGSDTE
                     VIVHGYEQWGKDVVKRLRGMFAFAIWDKRHKRMLLATDHLGKKPLFYSFDGKEFVFGS
                     EIKALLKAGVPIEPDPVALHDYLTYLYFPYPSTAYKHIRKLGPSMAMEVVVMPNGELK
                     KKEWKYWDAADAVNTPLKMSEREMVERARELMEEAVRIRLVSDVPLGLFLSGGLDSSA
                     ITALAARNSAEQVKTFTIGFSNSKFYDELPAANLVAQQYKTDHHILQADEACAEYMTT
                     VVRHF"
BASE COUNT         1728 a         2078 c         2402 g         1687 t
ORIGIN      
        1 cacacggtac gtccgggagt taccggctgg gcgcagatca agtatcagta cggctcaagt
       61 gtagaagacg caaaacgcaa gcttgagctg gacctttttt acatcaagca cctttctgta
      121 tcgctggacc tggcaatcat cttcgagacg gtgaaggtgg tcctgctggg caaaggtgcg
      181 aagtaacact ttgagtcagt ggaacgaaag agcctggaga gaaatatggt aacgagaaga
      241 atcctgattg caggcttgat gctggcgagt gtaatcgcag catcggcaca gaagcgctca
      301 gcggcgctga acgcaacgag cagcaacgtg gcggaaacca aggcggatat tcccttaacc
      361 cagcagactc tgccgaacat taaaccctcg gaatacaaag ttggcgaagc ggatgtgctg
      421 cacatcaacg tgtggaaaga gccggaagtt tcgcagaccg tcgtggtccg gactgacggc
      481 agcatttcat tgccgctgat caacgaggtg aaagtcaacg acctgactcc gctgcagatc
      541 caggacctgg tagccgacaa gctcaagaac ttcctgacca atcctcaggt aacggtcacg
      601 gtgacggaaa tccacagcaa gcgggccttc attaccggtg aagtaccgcg ccccggggtc
      661 tattccctga acacggaaac aacggtcctg cagctcatcg cgcaggccgg cgggcttacg
      721 ccattcgcga agcgcggcga catcgtggtg ctgcggttcg agaacgggaa gcagcagcgg
      781 ctgaaattca aatacaagga cgtggttagc ggcaaaaaca cgcagcagaa cattactctc
      841 cagccgggag acacagtggt ggtcccatga ggaacgggaa aaaattgcgg acggcgatat
      901 tggtcatgct ggcatgcctg gcgcctggca cgggggtagt ttttgcgcag agcgcgccgg
      961 cttctcaaca gagcgcgact ccaactccca cgccagcacc aagtccttct tccgagtcgc
     1021 aggaccccgg cgtggtgctc cagccggtga gtggcggcac agggccgtac tcggtgtcac
     1081 tcggaacggg gcagttgatt ggagttggcc cggagggcaa cacggaattc gccggcggag
     1141 cgggattggc acacggacag gctgccgagt tcaagaatct tttttattac ggcacttctg
     1201 cctccaccgt atactccaac gcgcttgatc ccgcgcaccc gcaggattac gtgttctcca
     1261 gttccttttc gccttacctg gcggtggtga tgccaacccg cacggggagc tttgttgccc
     1321 aatacacggc tacggtaaac cctaacgaca ccgccaatgg tgatccgcag gcgtttcatg
     1381 tcgccaattt gaagctgcaa ggtgcgttta cgcggcgctg gtcatggcaa ctgcagactt
     1441 cgggaagtta tggatctgaa tctgcgcgct ttcaggctcc gttgaactat gtggtggtgc
     1501 aatcaacgcc ggtggtgagt tccaactcgg cgatcctgct gcgcaccacg aattcctctt
     1561 atggggagag cgacgttcat ctgggatggc gcgccagttc ccgtgacgac atgggatgga
     1621 cattccgcca tacgtatacc ggcatcgcag gcgatccagg agacccgcaa tccagcggca
     1681 cgcactcgaa ctcggtgggc ctgcggatgg attatggacg cacgttgaat tcgcgtgtgg
     1741 tgatgacgct ttatggcgaa ggtgacagcc tgctcgatgg cccgacctgc aactcgattg
     1801 gaggcggagt gggctttgcg gtgaaggtga gccattcggt agcgctggac gtgggcggcg
     1861 gaccgcagcg caattccaac agctgtggcg gccagcagaa ctacaacttt aatgggaacc
     1921 tggtggcgaa cgtacgctgg agaacacgcc tttttgtcag cgcacaacgc cttttcagca
     1981 cggcgtaccg gacggatggt gtgtgggaag acaatgccag cgccggcttc agcaaggact
     2041 tcaagcggct caacgtaacc acggacgcgg gctgggtgcg cggggagccc ttcctgggaa
     2101 cgacgcaacg gtacgacggc tatttcgtct caccccgtat tcgtattcgc gcaacggaag
     2161 cactggctct taccgccggt taccgatctt tccatgcaac gggaggagcg atcgtaagcg
     2221 gaaacgagag ttttgcggtg gcgggcatag agtggtaccc ggccggcgtt cacttcaaat
     2281 aggaaatcgg agaaagagca atgaatcagg gaacgacgaa caacggcgtg gaccagctcc
     2341 tggcattctg gacgacagtc cggcactacc gcggatggat tttcctgggc acggtcttct
     2401 ttgcactgat cggttcgacg ctgatcttcc tgatgccgga ccattacaag gcaagcacga
     2461 ccatcctggt ggatccgcag aaggtaccgg aaaaatatgt gagtccaacc gtgagctcgg
     2521 atcccgggca gcgattgacc acgatcacgc agcaggtgct cagcacaacg cggctgcagc
     2581 agattatcga gcaccagagc ctttatccaa agctccaggg aaagctatcg agggaagaaa
     2641 ttgttgagct gatgcggaaa gacattacgc tgacggtcaa acaaggatct tccaacggcc
     2701 tgagcgcatt cacgattgaa tacgagggcg acgaccgcat ggcggtagcg aatgtggcaa
     2761 acgagctggc gtcgagcttt attgactgga acgtgaagaa ccgcgagcag caggctgtgg
     2821 ataccactga gttcctctcc gcacagctga aggaagccaa gcagaacctt gaagagcagg
     2881 agcgcaaggt aagcgccttt aagatggcgc acctgggtga gatgccggag cagcaggctg
     2941 gcaacctgca ggcactcagc caactgcagg tgcagctaca ggctaatgcg gatgcgctga
     3001 atcggctgga agtggaacgg acgctcctca cgcgcggcct ggatccggcg agcacgagca
     3061 gtggcatcag cagagctacc ccagtcacag agcgtgggcg gctggaagct gaacgccgtg
     3121 atctgaaggc aacactcact gacctgcgca ggcgttacac gcccaaccat ccggaagtaa
     3181 aggacgcttc agacaggctg gccaggctgg aagagcagat caaggcgctg ccaccggatc
     3241 cgccggtgac agctgacacc aatgacaata ccgcggtctc tgtcagattg cagctggtag
     3301 atcgcgagca aaaacggcta gcggaagagc agaagcgaat caccaaccag attgcctctt
     3361 atcggaccag ggtggatgcc gtaccggtgc gcgaacagca gatggccgag ctgaatcgca
     3421 attacagtgt ctcgaaagaa cattaccagt cactgctgga taagacgttc tcagcagaga
     3481 tggcggcgga cctggagcgc aagcaacagg cagagcactt caccattgtg gacaaagcgc
     3541 aggtgccgga acgccccttc aagccgaaac gccggatgat gcttctgggc gccgtgctgg
     3601 gcgcgttctt cttttccgtt gggatcgcct acgcaaaaga catgttcaat ccgacattca
     3661 aaatcgagcg cgaactgcgg gccgtgttgc cggcgaacgt gccggtaatg gccagcattc
     3721 ccaagctgga atgcggggcg gaccggagaa agtcattccg cttcgcggta atagcggtga
     3781 tcctggccac tgcgggatgc accctggagt tcctgttgta cgtgaagctg cacccgatcc
     3841 tctaagggcg cacgagttgt gaactttgaa ccagcagaag ggattgcaag ggccaggaaa
     3901 cggatgagcg cgctgaaaac attctatcgc cactcttcgc attatctggg cggccgcgtg
     3961 gcggtgatga tgctgggctt catctcattc ccgctattca cacgcgtgtt ttcagtggct
     4021 gagtacgggg aaatgagcct gatcatgaac acggtactcc tgctcaccgt gatgtcaaag
     4081 ttcgggttcc agcatgcagt gcagcgctac tatcccgagt atgcaagctc gcccgatcca
     4141 acagccctct cccgctacta cgccaccctg ttctatggaa cggggttcat tgcactcact
     4201 ctttgtgccc tgttcctgat cgctgttccg tttggggcaa cgcagttcct ggggataacc
     4261 gccaacggcg cgctcatgct ggcgctgatt ctggtggtgg ttcgctcgct ccgctccatg
     4321 cagatgaacc tgatgcagat ggagaacaag accaggctgt tcaatggcgt ggacatcctg
     4381 gcaaaggcgc tgatcattgc caccatctgc ttcttcctgt tcttctggaa aaagagcatt
     4441 ttctcgtttt tcctggggac agtaattgtg gagaccgcgt ttcttctgca gtacatgccc
     4501 tttctttccc ggcgcggcct gctttcgatt caagttttca atccggagtt tttccgttcc
     4561 gccgtgatgt ttgcgtttcc gctgatgact gcagaaatct cctgggtggt gctggattcc
     4621 ggcgatcgct tttttgtgca gcattacctt ggggcacagt ccctgggctt ttatgccgcg
     4681 gcatacggaa tcgccactta cctgcaggac gtgatgatgg cgccgctgca actggccttg
     4741 tttcccatct gcatgaagct ctggacgaat aaaggcaaag cggaaacgca ggaattcctg
     4801 agccgcagtc ttgaccattt tgcaatggtg gcggtgggcg tggtcagcgt gttcatggtt
     4861 gcttcacgcg acgtgatcgt gctgctggcc tcaaagaaat ttcaggaggc gcacaggctg
     4921 attccgtatc tggtgattgg gctggtgctt tcggcggtta ccgtttattt ccgccccggc
     4981 ctgctgatcc acaaaaaggc ttcaaagatc gccacggcga cgctgggagc aagcattttg
     5041 aatgtggcac tcaacattgc gctgctgccg cggattggcc tgcttggggc cgccattgcg
     5101 actacggtga gctatggagc aatcgtagtg ttcctggcat gggaatcact gcgagtgctg
     5161 ccgttcaaga tcgaatggat tgcctttgtg cgctacgttg tcgccggttc agccgtggct
     5221 tacgcggcaa cttatttgcc cgtacagaag ccgctgctga atgcgatctg caaaggcacg
     5281 tttgtggtta cgctgtacgc cgctgtgctg tgggtgacgg atgtgcgcgt gcgcaagctg
     5341 atcagcaggg cataccagat tggcagcagg cagatcaggc agttgggaaa acagcctcct
     5401 gtaactccga tggctccatt agcggccccg gcgcccgcgc cggtagaaga ggaaattgcg
     5461 gtgaaccagt aagttgagcg gaagattatg aatctgcact ttggactcga aggatacgta
     5521 ccgctaacgc tctacctgag cgcgatagct gcctttgtgc tttcagtttt ctggaagccc
     5581 caggcaggcc tgtacttcct tattccattg ctgcctctgc agacggtgcg ttaccgcctt
     5641 atggattacc cgctgggcaa caagctgatt gacatcattc tgttgggtgt ggtgctgggc
     5701 acggtgctaa aaggcggatt caagttcgtg aagacgccca tgaacagggt gctggtgctt
     5761 tatgggctgt tctgttacct gcaattgtgg cggggaacgt tcttcatcaa ttcagagctt
     5821 ccgctgtcga tctctgatcc gcgtttttcc gactggaaga actatatggt gcttttcatc
     5881 ctgttcggca ttgtggcgag caccatcaag acggtccggc agatccagat tgtggttctg
     5941 ctgctgtgca tttctgcatt cctggtggac aagggatact acggcaatat gagcggccgc
     6001 gatctcacgc acttttccta tgaagtgcgc gacggcggcc cgctgggcta cgccggcgtg
     6061 aacggggtgg ccacttacgt tgccgagttc atgctcttcc tgctcgggct gatggcctac
     6121 gagcgcaaga agctgcgcaa ggcggtgatg tggggagtgt tggcgctggg cggatactgc
     6181 ctgctgtttt cgttctcgcg cgaagcgtac gcgggggtac tggtaggcgc ggtggtactg
     6241 ggactgctga agcagcgctg ggtgcttctt gcagtgctgg cctttctctt gagctggcag
     6301 agcctggtgc ctacctcagt gcaggaacgc gttttgatga cgtatgacaa gaatgaccag
     6361 caactcgata cttcagcaca ggaccgggta acgctctgga atgatgccat ggacatgttc
     6421 cagcagaacc cggcgattgg gattggattc gatacctaca agtggctgca ccgggtttcc
     6481 atctacaccg atacgcataa ctacttccta aaggtgctgg tggaaaccgg tgtgtttggg
     6541 ctgctgtttt tcctgtgggt gctgatcaag atgtcacgaa tggggctgca gctgtttcga
     6601 tccgctaaag acccgttcct gaagtcattg gggctggctt ttacgttgat gatggcctgt
     6661 gtgttcgtgg tgaacttttt cggcgaccgc tggctgtaca tcgaggtgaa tggcgctttg
     6721 tgggtgaccc tggcgtgcgt ggtacgcggg cagatgattg tgaatgagag cgaagcctcg
     6781 cagacgcagc cggaaacaac agcggagagc gagccggaaa tgatggcgga agaacccgcc
     6841 tacgtataac cggcaggaac tattcgggac aagattttat gtgtgggata ttcggaaaaa
     6901 tcggcagctc gcccgcggat gaaaaatgcg ggctggagct caagcatcgc ggtccggatg
     6961 atggcggctt gaaatatttt gttgtgcccg agctctcagt atgggtgagc ctgcagcagc
     7021 ggcggctttc cattattgac ctttcctccg cgggccacca gccgatgtgt aacgaagatg
     7081 aatcagtctg gatcatcttc aacggcgaga tatacaactt ccaggagttg cggcaggagc
     7141 tgattgcaga ggggcacacc ttccgctcag gatcagacac agaagtgatt gtgcacggct
     7201 acgaacagtg ggggaaggat gtggtcaagc ggctgcgagg catgtttgca ttcgcgatat
     7261 gggacaaacg gcataaacgc atgctgctgg cgacggacca cctgggcaag aagccgctct
     7321 tctattcctt tgacggcaaa gagttcgttt ttggctctga gatcaaggcg ctgctcaagg
     7381 cgggagtgcc gattgaaccc gatccggtgg cgctgcacga ctatctaaca tatctctact
     7441 ttccataccc ttcgacggca tacaagcata tccggaagct tggcccttcc atggcgatgg
     7501 aagtggtcgt gatgccgaat ggggaactca aaaagaagga atggaagtac tgggacgccg
     7561 ctgacgcggt gaatacgccc ctgaagatga gcgagcgcga aatggttgaa cgcgcgcgcg
     7621 aactgatgga agaggcggta agaatccgcc tggtcagcga cgttccactg gggctgttcc
     7681 tgagtggcgg gctggattca agcgcgatca ccgcgctggc tgcgcggaac agcgcggagc
     7741 aggtaaagac tttcaccatt gggttttcga acagcaagtt ctatgacgag cttccggcgg
     7801 cgaacctggt agcgcagcag tacaagaccg atcaccacat cctgcaagcg gacgaagcct
     7861 gcgccgaata catgaccacg gtggtccggc acttt
//
LOCUS       DASQYP010000281         5836 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_201122, whole genome shotgun sequence.
ACCESSION   DASQYP010000281 DASQYP010000000
VERSION     DASQYP010000281.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 5836)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5836)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5836
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_201122"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            166..672
                     /locus_tag="VE783_09095"
     CDS             166..672
                     /locus_tag="VE783_09095"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53597.1"
                     /translation="MKPANGRCLIFCIFVFAAFTLSAAQGPIKPSSGKALCNALTPAD
                     FSKAGVPVSALSQANTDGNDGAYCVYKSSAGKVEFDIFYPAGANAAEVLATEKTVLGE
                     GGSKYTPLKLAGADRAQISLAMPDLPQSAGIVVRKGNAVFDIVVPRGTKAREQLVTLA
                     QVVLGRIR"
     gene            692..1150
                     /locus_tag="VE783_09100"
     CDS             692..1150
                     /locus_tag="VE783_09100"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53598.1"
                     /translation="MIAYRISKYNPALRDASGAYTRPEWTSFSDIGRTFSGVTLTATE
                     YRRMEAAYINAACAFLREAGVTVLKVLELENPQQTQLEFAEGTVLSLEQAGPLIGRML
                     REEFWSLLAAQNASVHVGYDYLMSIRVPYPCPAAEKTAAELGLYVERFEV"
     gene            1241..3052
                     /locus_tag="VE783_09105"
     CDS             1241..3052
                     /locus_tag="VE783_09105"
                     /inference="COORDINATES: protein motif:HMM:NF014763.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD domain-containing phosphohydrolase"
                     /protein_id="HYX53599.1"
                     /translation="MKLPLPSRIPIIYGILFVLMAVGVAPLYFYATKVVDTNRERLQR
                     NEKLLQNTLTTTLAQDISQRERDIRGKLSDLAYSVMVTSGRDLTGNRINLPGVQGLLN
                     NSLSSADTTIVMIRLLNPEHHFLAMTATGASVVDQDAFVAKELDRALAAADELREYSG
                     GALVTGSGKHTRTVMVVSKPILDDNRKYLGTLQLVVDLNYLIQKLKEASDRDQGLEAF
                     VVDESGRLVVASPNMQYATGQDMSTNELVRSFVEQGANARLSVTKEYTLQAGKAKVPM
                     LGTFFAVPGLGWAVMAQKTQEDAYIDVIDMQHEALRFALIAVAFSILVGVWATRRLTT
                     PLHVLTESSRAIAAGDLSQRVRLASRTEFGELAQTFNTMTDELERFVADLKEAAEKNE
                     TLFLASIQMLAGAVDEKDPYTRGHSDRVTRYSVLIATEMGLKEEDISKIRISAQLHDV
                     GKIGIEDRILKKPGALTPEEFEIMKTHTTKGAAILRPVEMLRDMLPGIELHHESLDGR
                     GYPYGLKGDQIPLMPRVIMVADTFDAMTTNRPYQAAMDPEYVIRIINSLAATKFDPNV
                     VAAMTRVFQSGRLRIQRAAVVTGEQAAPQTITTAEPV"
     gene            3209..4159
                     /gene="ftsY"
                     /locus_tag="VE783_09110"
     CDS             3209..4159
                     /gene="ftsY"
                     /locus_tag="VE783_09110"
                     /inference="COORDINATES: protein motif:HMM:TIGR00064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005047 - signal recognition particle
                     binding [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="signal recognition particle-docking protein
                     FtsY"
                     /protein_id="HYX53600.1"
                     /translation="MIQTLFGTPEPTFLEKMKQAVTRTRENLSERIDEALAFTKEIDR
                     NTLDELEGILISADLGTKTTEEILGKLREKADRKQIKDGSELKKLIKDQIQDILKSTP
                     PKSGKPFKGEPEVVMVVGVNGTGKTTTIGKLAHAMRTEGKTVLLCAADTFRAAAIEQL
                     EIWGSRTGVEVIKTKPGGDPSAVLFDALNAAKARHTDTVIVDTAGRLHTKTSLMAELE
                     KMKRTAQRIIPGSPHEVLLVMDATTGQNGLQQARLFTESAGVTGIVLTKLDGTAKGGI
                     VVAISRELGLPVRYVGVGEKAGDLLPFSPENFVDSLFEAA"
     gene            4156..5331
                     /gene="ribD"
                     /locus_tag="VE783_09115"
     CDS             4156..5331
                     /gene="ribD"
                     /locus_tag="VE783_09115"
                     /EC_number="1.1.1.193"
                     /EC_number="3.5.4.26"
                     /inference="COORDINATES: protein motif:HMM:TIGR00326.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008703 -
                     5-amino-6-(5-phosphoribosylamino)uracil reductase activity
                     [Evidence IEA];
                     GO_function: GO:0008835 -
                     diaminohydroxyphosphoribosylaminopyrimidine deaminase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     diaminohydroxyphosphoribosylaminopyrimidine
                     deaminase/5-amino-6-(5-phosphoribosylamino)uracil
                     reductase RibD"
                     /protein_id="HYX53601.1"
                     /translation="MSFTPQDDALMRQAMDLARQGVALTSPNPCVGAVVVSASGQVVG
                     SGFHTYDGVKHGEVIALEAAGDQARGGTLYLNLEPCSHQGRTGPCAETVIAAGIKRVV
                     CSMLDPNPVVAGRGADKLRNAGIQFDLGLMEAEAHKLNEAFARYITSRCPLLTLKAGM
                     TLDGKIAPPPGEGIVPSALGSATATGGWITSAEARAHVQQLRHASDAIMVGVGTVIAD
                     DPLLTDRTALPRRRPLLRVILDSRLRLPLESRLVKTARNDILVLCSFAEEKKRGELQS
                     RGIRVEQIALGSSDGRPDLHRVVARLGELEITSLLIEGGALVNWTALASGIVDKIFLY
                     YAPKILAGTGSVPFASGAGFQRMSEAAAVKHIALHRFGEDFAVEGYLRDPYIKEPTS"
     gene            5331..>5836
                     /locus_tag="VE783_09120"
     CDS             5331..>5836
                     /locus_tag="VE783_09120"
                     /EC_number="2.5.1.9"
                     /inference="COORDINATES: protein motif:HMM:TIGR00187.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="riboflavin synthase"
                     /protein_id="HYX53602.1"
                     /translation="MFTGLIQETGEIAGLRQMKGKKGTLTRITVRAAKVPSELKLGDS
                     VAVNGVCLTAVERSRKQFSADLAEETLKRTSLGSLKKGSCVNLELPARPADRLGGHIV
                     QGHVDGVGKLLSFERIKGADDWRLAIEVPEDIRRYIVPQGSITVEGISLTVARLEGAR
                     VEIAIIPHT"
BASE COUNT         1286 a         1678 c         1732 g         1140 t
ORIGIN      
        1 gccgtaacag cgttggcgct catctatcaa ggcagtctgg gcggcttgat ggtcttcggt
       61 aagtgaacgt caacaccaga cctgacttct gcaacttctc cgggtaaggg ttcaaagtcc
      121 tccctgcaga gcgatagccc acgtgtgctc tgctatcctg tgcgcatgaa acctgccaac
      181 ggaagatgcc tgatcttctg catttttgtg tttgccgcat tcactctctc ggctgcgcaa
      241 ggtcccatca aaccatcatc aggcaaagca ttgtgcaatg cgctcacgcc ggctgatttc
      301 agcaaagccg gagtgcctgt ttccgcgctc agtcaagcca atactgacgg gaacgatggc
      361 gcctattgcg tctacaagag ttcggcggga aaagtagagt ttgacatttt ttatcccgcc
      421 ggagccaatg cagcagaagt gttggccacg gagaagactg tgctgggcga aggtggaagc
      481 aaatacacac cgctgaagct ggccggagcg gaccgtgcgc agatcagcct cgcgatgccc
      541 gatctgccgc aatcggcggg catcgtggtg cgcaagggta atgcagtctt cgatattgtg
      601 gtcccgagag gaacaaaagc gcgggagcag ctcgtcacct tggctcaggt tgtgctgggc
      661 aggatcaggt aacacaaact taggccgtac agtgatcgca taccgcattt ccaagtacaa
      721 tcccgctctg cgtgacgcct ccggcgcata cacgcggcca gaatggactt cattctcgga
      781 tatcggccgg accttcagtg gcgtaacgct cactgcaacg gaatacaggc ggatggaagc
      841 tgcttatatc aacgcagcct gcgcattcct gagggaagca ggcgtgaccg tgctgaaagt
      901 tctggagttg gagaatcctc agcagacgca gcttgagttt gccgaaggca ctgtactgtc
      961 tctggagcag gccggaccgc taatcggcag aatgctgcgc gaggagttct ggagcctgct
     1021 cgccgcccaa aacgcctccg tccatgtagg ttatgactac ctgatgtcga ttcgagtgcc
     1081 atacccgtgc cctgccgccg aaaaaaccgc cgccgagctg ggactgtatg tggaacgatt
     1141 tgaggtctga tcggggtact tttgtaaccg taatcgtgtt tgggattttg gttattttcg
     1201 agggcgtttc ggcatacaat cgagggataa atccagctgt atgaaactcc ctttaccgtc
     1261 ccgaataccg atcatctacg gcattctgtt tgtcctaatg gccgtgggcg tagctccgct
     1321 ttatttctac gcgaccaaag tggttgacac caaccgggaa cggctgcagc gcaatgaaaa
     1381 gcttctgcaa aataccctga ccacaacgct ggcacaggac atctcccagc gggaaagaga
     1441 tattcgaggc aagctgagtg atctggcgta ctcggtcatg gtgaccagcg ggcgcgacct
     1501 caccggcaac cgcatcaacc tgcccggggt tcagggtctg ctgaacaata gtttgagcag
     1561 tgctgacacc accattgtga tgatacggct gctcaatcct gaacaccact tccttgctat
     1621 gacggccacc ggcgcgagcg ttgtggacca ggacgccttc gtagcaaaag aactggaccg
     1681 agcgcttgca gccgcagatg agctgcgcga atacagtggc ggcgcgctgg tcacaggctc
     1741 cggcaagcat acccgcacgg tgatggtggt cagcaagccc atccttgatg acaaccggaa
     1801 gtatctcgga acccttcaac tcgttgtcga tctcaactat ctgatccaga agctgaagga
     1861 agccagcgac cgcgaccagg ggctggaagc ctttgtggtg gatgaatcag gccgtctggt
     1921 ggtggcttct cccaatatgc agtacgccac cggccaggac atgagcacga acgagctggt
     1981 gcgcagcttt gtggaacaag gcgccaacgc ccgcctttcc gtaaccaagg aatacaccct
     2041 gcaggccggg aaggccaaag tgccgatgct cggcacgttc ttcgcggttc ccggactcgg
     2101 ctgggccgtg atggcccaga agacgcagga agacgcgtac attgacgtga ttgacatgca
     2161 gcatgaggcg cttcgttttg cgctgattgc ggtggccttc agcattcttg taggggtgtg
     2221 ggctacccgc agattgacga ctccgctcca tgtcctcacg gaatcaagcc gcgccatagc
     2281 cgccggggat ctttcccagc gcgtgaggct ggccagccgc acggagttcg gcgaactcgc
     2341 gcagaccttc aacaccatga ccgacgaact ggaacggttc gtcgcggacc tgaaagaagc
     2401 tgccgaaaag aacgagaccc ttttcctcgc ctccatccag atgctggccg gcgcggtcga
     2461 cgaaaaggac ccctacacgc gaggccattc cgaccgcgtg actcgctact cggttttgat
     2521 cgcaaccgag atggggctga aggaagagga catttccaag atccgcatct ccgcgcagct
     2581 gcatgacgtc ggcaagatcg gaatcgaaga tcgcatcctg aagaagcccg gtgcgctcac
     2641 gccggaagag tttgaaatca tgaagacgca caccactaag ggcgccgcga ttttgcgtcc
     2701 ggttgagatg ctgcgtgaca tgctgccggg aatcgagtta catcacgagt cgctggacgg
     2761 ccgcggctat ccttatggcc tcaagggcga tcagattccg ctgatgccgc gcgtcatcat
     2821 ggtggcggat actttcgacg ccatgaccac caaccgtccc tatcaggcgg cgatggaccc
     2881 ggaatacgtg atccgcatca tcaactcgct ggccgccacc aagttcgatc ccaatgtggt
     2941 cgccgccatg acgcgtgtct tccaaagcgg caggctgcgc atccagaggg ctgcagtggt
     3001 cactggcgag caggctgcgc cgcagaccat caccacggcc gagcccgtct aagccgttcc
     3061 cgcaagtcag cttgttcaaa cctttataat cacaagagtt ggcgactcga taaaaacgcg
     3121 cattaagcca ttgtttggct ttgattttcc cggtatttcc gcgcttcggg tcgcttaccg
     3181 aagactctat ttttgaaatg attcggcaat gatacagaca ctttttggca cgccggaacc
     3241 tacgttcctg gaaaaaatga aacaggcggt cacgcgcacg cgcgagaacc tgagcgagcg
     3301 cattgatgaa gccctggctt tcaccaaaga aatcgatcgc aataccctcg acgaactgga
     3361 aggcatactg atcagcgccg acctgggaac aaaaaccacg gaagagattc tgggcaagct
     3421 tcgcgagaag gcggaccgca agcagatcaa agatggcagc gaacttaaga agctgatcaa
     3481 agatcagata caggacatcc tgaagtcgac tccgcctaaa tcaggaaaac ccttcaaagg
     3541 cgaaccagaa gtagtaatgg ttgtgggcgt gaacggtacc gggaagacaa ccacgattgg
     3601 caagctggcg cacgcgatgc gcacggaagg caagacggtg ctgctctgcg cggctgacac
     3661 atttcgcgcc gcagccattg aacaacttga aatctggggc tcgcgcaccg gagtggaagt
     3721 catcaagacc aagcccggcg gcgatccatc ggcggtgctc tttgacgcat tgaacgccgc
     3781 caaagctcga cataccgaca ccgtcatagt cgacacggcc ggccggctgc acaccaaaac
     3841 cagcctgatg gcggagctgg aaaagatgaa gcgcacggcg caaaggatca ttcccggatc
     3901 gccacacgaa gtgctgctcg tgatggacgc cactacaggg caaaacggtc tccagcaggc
     3961 gcggctgttc accgagtccg cgggcgtaac cggcatcgtg ctcactaagc tcgatggcac
     4021 agccaaaggc ggcattgtag tcgcgatctc gcgcgagctg ggcctgcccg tgcggtacgt
     4081 cggcgtggga gaaaaagcag gcgacctgct tcccttcagc ccggaaaact ttgtggattc
     4141 gctgttcgaa gcagcatgag cttcaccccg caggacgatg ccttgatgcg ccaggctatg
     4201 gatctggcga gacaaggcgt tgcactgact tcacccaatc cgtgcgttgg agccgtggtg
     4261 gtgagcgctt cgggccaggt ggttgggagc ggcttccaca cctacgacgg cgtgaagcac
     4321 ggcgaggtga tcgcgctgga ggcggcgggc gaccaagcac gcggcgggac actctacctc
     4381 aacctggaac cctgcagtca tcaaggacgc accggacctt gcgcggagac ggtgatcgcc
     4441 gccgggatca agcgtgtggt ctgctccatg ctcgatccca atcctgtggt tgctggccgc
     4501 ggcgcggaca agctgcgcaa tgcgggcatc cagttcgatc tcggactcat ggaggctgag
     4561 gcgcacaagt taaacgaggc gttcgcgcgc tacatcacca gccgctgccc tctgctgacg
     4621 ctcaaggccg gcatgacgct cgatggaaaa atcgctccgc cgcccggcga aggcattgtc
     4681 ccatcggctc ttggctcagc caccgccaca ggaggctgga ttaccagcgc tgaagcccgc
     4741 gctcacgtcc agcagctacg gcatgcctct gatgcgatca tggtaggcgt gggaacggtg
     4801 attgcggacg atcccctgct caccgatcgc accgctttgc cacggcgtcg cccgttactt
     4861 cgcgtgattc tggactcgcg gctccgtctg ccgctggaat cacgtctggt gaagaccgcc
     4921 aggaatgaca ttctggtgct gtgctcattc gccgaagaaa aaaaacgcgg cgaacttcaa
     4981 tcccgcggca ttcgcgtgga gcagattgct ttaggttcga gtgatgggcg tcctgacctg
     5041 caccgcgtcg tcgcgcgcct gggcgagctg gaaatcacca gcctgctcat agaaggcggc
     5101 gcgctggtta actggactgc acttgcctca ggaatcgtgg acaaaatctt tctctattac
     5161 gcgccgaaga tccttgccgg caccgggtct gtgccgttcg ccagcggagc cgggtttcag
     5221 cggatgagtg aggctgcagc ggtgaagcac attgcgctgc accgcttcgg agaagatttt
     5281 gccgtggaag gctatttgcg cgacccttac ataaaggagc caacttcctg atgtttaccg
     5341 gccttataca ggagacgggc gagatcgccg gactacggca gatgaaaggc aagaagggca
     5401 cgctcactcg cattactgtt cgcgccgcga aggtgccttc tgaactcaag ctgggtgaca
     5461 gtgtcgccgt gaatggtgtt tgccttactg ccgtcgagcg aagccgcaaa cagttctccg
     5521 ccgatcttgc ggaagagacg ctcaagcgca cctctctggg atccttgaag aaaggttcgt
     5581 gcgttaatct tgagctgcct gcgcgcccgg cagaccggtt gggcgggcac attgtccagg
     5641 gccacgtcga tggcgtgggc aagctgctga gcttcgagcg catcaagggc gcggacgact
     5701 ggcggctggc gatcgaggtt cccgaggata ttcggcgcta catcgtaccg cagggatcta
     5761 tcaccgtgga agggattagc ctgacggtag ctcggcttga aggggcccgt gtagagatcg
     5821 cgattatccc gcacac
//
LOCUS       DASQYP010000282         9023 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_79686, whole genome shotgun sequence.
ACCESSION   DASQYP010000282 DASQYP010000000
VERSION     DASQYP010000282.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 9023)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9023)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9023
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_79686"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..527
                     /locus_tag="VE783_09125"
     CDS             <1..527
                     /locus_tag="VE783_09125"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53603.1"
                     /translation="AFSGPVDNVYRGATPAGYNVIQLKPSGALVAILGLFECPRLNGA
                     QHVNQGAESRVVLADGASLNRFPQHFSVRVTASLRKTLVEAPEFTVATDKSPEEFLLG
                     LKFRMQAFDGLDHHVVLPKSVAMIGMPAQVPYDERVYKLDFDVGDRPITSRFLLQVYS
                     PRGEPIGRFTFGLL"
     gene            complement(593..1516)
                     /locus_tag="VE783_09130"
     CDS             complement(593..1516)
                     /locus_tag="VE783_09130"
                     /inference="COORDINATES: protein motif:HMM:NF013862.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="patatin-like phospholipase family protein"
                     /protein_id="HYX53604.1"
                     /translation="MKNPLDKIVRTVQAFGRELTRQGREQVDGQTPRVPKVGLALGGG
                     FARGLAHIGILKVLEEEQIPIDYLAGTSVGSVIGAGYATGLSPKELEEISALVRFKDF
                     SRWTFSRFGLFSNDKLAIFLQKALRCKSFEDLRIPLAVAATDIITGDAVVFTEGNLVD
                     SVRASCAYPGMFQPVKIGDRLLVDGLLAHAVPAMPLREMGAERVISVHLAAHWVKPRG
                     PRHVFDVIGQCFSIAQDRMCGPWRAASDVVIEPEIGDFGYDDFVRAPELIRAGEAAAR
                     AAMPKIREFFPAAAAAKAQPATATTVPVVAK"
     gene            1650..2237
                     /locus_tag="VE783_09135"
     CDS             1650..2237
                     /locus_tag="VE783_09135"
                     /inference="COORDINATES: protein motif:HMM:NF012514.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX domain-containing protein"
                     /protein_id="HYX53605.1"
                     /translation="MANRSDLGNLIRGLPISDMKKPASPPFSESHKHKDRSGIMLREF
                     SAGALVLRQMQDRWWVAVIEPGRDGEPEDRKNTIALPKGNIDSGEKAPEAAAREVNEE
                     TGLQARLITKLSDIKYVYSRTWSDNAKIFKVVSFFLMKYHSGQIGNIRDDMKHEVRRA
                     WWMPLDEAATKLSYSGEKQMARKALAYLKEHGDLA"
     gene            complement(3112..3825)
                     /locus_tag="VE783_09140"
     CDS             complement(3112..3825)
                     /locus_tag="VE783_09140"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53606.1"
                     /translation="MKRTVAILNSFAALAVLAVAGLAGAQNPELRERVAEIKQTMAQN
                     KAELAQYTWQEQQTISVKGEVKKQSLFQVRLGPDGKPQKQPLGSPDQQASSGGRRHGL
                     KHRVVEKKKEEFEEYAQQIAQLAQGYMQPDPGRLQQLFEQGNVSLGPAGVPGEVRLMI
                     QNYLKPGDTVTLIFNRSQKMLQSLQISSYLNDPSDAVTIAAQFSRLANGPSHVSDVSV
                     NGVKKQLLVQMQNSNYQGM"
     gene            complement(3840..5105)
                     /locus_tag="VE783_09145"
     CDS             complement(3840..5105)
                     /locus_tag="VE783_09145"
                     /inference="COORDINATES: protein motif:HMM:TIGR03942.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0018209 - peptidyl-serine modification
                     [Evidence IEA];
                     GO_process: GO:0046500 - S-adenosylmethionine metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="anaerobic sulfatase maturase"
                     /protein_id="HYX53607.1"
                     /translation="MCAISTLEFPAIPLPANGVRRFHVMVKPVGAICNLNCAYCYYLH
                     KQELLGSEQRFRMSDEILETHIRQYIEQQDGDEVIFTWQGGEPTLLGLEFFEKVVALE
                     KKYKKPNQRIENDLQTNGTLLNDEWCRFLKQNRFLVGLSIDGPEELHDRYRVAKDGRP
                     TFKKVFAASQLLHRHGIRFNSLTVINRENAKRPLDVYRFLKREVRPFQMQFIPCVEPK
                     EFRSVAPQHWPPESLPVMGASAARPGTPDSIVTDWSVDPDDWGYFLCKVWDDWFSRDY
                     GKVFVNLFETAVAQWMGKDAQICVYHEFCGKAAALEHDGSLYSCDHYVYPEYRLGNIA
                     GQNSAEMIFSRRQQEFGFSKFLSLPPRCRDCEYLFACNGECPKNRLLRTPEGDAGLSY
                     LCSGLKRFWEHIDHDMVEIRKRVKGEQKY"
     gene            complement(5490..6446)
                     /locus_tag="VE783_09150"
     CDS             complement(5490..6446)
                     /locus_tag="VE783_09150"
                     /inference="COORDINATES: protein motif:HMM:NF024946.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transporter"
                     /protein_id="HYX53608.1"
                     /translation="MKSQSKALFILLALMLASTLAIAQQKGQYVTGQFGLDSGLLPEP
                     GLTYTNMSLHYNSDTLRNANGSNTPINGNLGFWINENIVTYVAPFKIAGAKLALTAVL
                     PAANGSASLERFAAITGGNNIPTGYADTWVQPVTLGWQADRIAFNVGYAFMAPTGRYT
                     PGATDNVGSGYWGNNLNSGTTVYLTKNKGTSLSLFTNWEGHGVKSGTNKTPGQAFTDE
                     WGLGQMLPLAKDESKLIQLGVIGYDQWEITDDKGTIGPGIPAGITPHYQVHALGFQTN
                     FIMPKKGFVAFFKFEPEYLAKARPEGQTIVFGASYTFKFPGK"
     gene            7236..8222
                     /locus_tag="VE783_09155"
     CDS             7236..8222
                     /locus_tag="VE783_09155"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53609.1"
                     /translation="MKSRNLFGTLYRLLLGFLIAALCLPTLALEAQENLNSKASSAAT
                     ASADPAPQADEDAAAASRLAKDAQNPVANLISVPLQNNNNFKIGPNGRAQDVLNIQPV
                     IPLKLNDKWMLISRTIQPIVWQPFPLQTAGGQYGLGDMVETVFLSPAKPGRLIWGVGP
                     ALMIPTATSTMLGQGKLAPGPSVVVLTQPPGWTLGALINNVWSVSGSANRPAVNQMLM
                     QCFVTRNLQKGWYLTTSPIITADWRASSGNIWTVPVGGGVGRITKMGFQPINASLQFY
                     GNAAHPAGASSWSMRTQIALLFPQLTRAQTKMILKQKLNKMEEEDRQKQAAK"
     gene            complement(8234..>9023)
                     /locus_tag="VE783_09160"
     CDS             complement(8234..>9023)
                     /locus_tag="VE783_09160"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53610.1"
                     /translation="AVMLATAGAHSAALRLHRRTSPAALNRVAASGWSEDESVLAKAI
                     AIRAEKLQQSTVFHFDTDWTPKVSLEWQVGGAGANGFEGVYKPETETIYFPIHVIYEF
                     NARQKRGATALSAQTAAQDRQLAELLDHELGHELTDQVSRRNGLGPWFTEQRFDASTR
                     EEKLGLDILSEGTALFFQRVNFPQPKSQLSEQLFPATREEQRSYTYETVAYDGGYWIV
                     HDVLSQYGEHGLVWLMQHPFVARDDMRAAAVEYHRRALDELAAR"
BASE COUNT         1866 a         2805 c         2359 g         1993 t
ORIGIN      
        1 tcgccttctc cggaccggta gataacgttt accgaggcgc aacccccgct ggctacaacg
       61 ttatccaact caaaccttca ggagctctgg tcgcaatcct gggattgttt gaatgcccgc
      121 gtctcaatgg cgctcaacac gtcaaccagg gagccgaatc acgtgttgtt ctggccgatg
      181 gcgcctcact caaccgtttt ccccagcact tcagcgtgcg cgtaaccgcc agccttcgca
      241 aaactttggt cgaggccccg gagttcacgg tggcgacgga taagtcgccc gaggaattcc
      301 ttcttggcct gaagttccgc atgcaagcgt ttgacgggct tgatcaccat gtggttctgc
      361 ccaaatccgt agccatgatc ggtatgcccg cgcaggttcc ttacgacgag cgagtctaca
      421 aactggattt tgacgttggc gaccgcccca ttaccagccg cttccttctt caggtctatt
      481 cacccagggg cgagccgatc gggcgcttca ccttcggact gctctaacca caaccgaagc
      541 gcaactcatt cgtatggctt cgggctgctc taaatcgcgc cctcaagctc agctactttg
      601 ccactaccgg cacagtcgtt gcagtggcag gctgtgcttt cgccgctgcc gcagcaggga
      661 agaactccct gattttcggc atggccgccc gggccgcagc ttcgccggcc ctgatcaact
      721 ctggcgccct gacaaagtcg tcatagccaa agtcgccaat ctccggttca atcaccacat
      781 cggaagcagc tcgccacggg ccgcacatcc ggtcttgcgc aatggaaaag cactggccga
      841 taacgtcaaa cacatgccgc ggccctctcg gcttcaccca gtgcgcggcc aaatggactg
      901 agatgacccg ctcagcaccc atctcccgca gaggcatggc cggaaccgcg tgggccagca
      961 gcccatccac cagcagccga tcgccaatct tcaccggttg aaacattcct gggtacgcac
     1021 agcttgcccg gactgaatcc accagattgc cttccgtaaa caccaccgca tcgccggtaa
     1081 taatgtccgt ggcggccacg gccagcggaa tccgcaggtc ttcaaagctc ttgcagcgca
     1141 gcgccttctg cagaaagatg gccagcttgt cattgctgaa gagcccaaac cgggaaaagg
     1201 tccagcggga aaagtctttg aaccgtacca gagccgatat ctcttccagt tccttgggtg
     1261 agagcccggt cgcgtacccg gccccaatca ccgaacccac gctggtgccg gccagatagt
     1321 cgatcgggat ctgctcttct tccagcactt tcagtatccc aatgtgagcc aggccgcgtg
     1381 caaacccgcc acccagggcc agccccacct tcggcacccg aggcgtctgg ccatcaacct
     1441 gttcccggcc ttgccgcgtc agttcgcgcc caaaggcctg tacagtccgt acaatcttat
     1501 ccagcggatt cttcacaatc cggctcccag ggctgccaaa tccagcagct tatacaacgt
     1561 aagatgccgc tttaccgctt ccgatgcaac ctctttccat acaaaccggc atttccgctg
     1621 tttgtttcgc cggaacgtcc tgttaaccca tggcaaaccg cagtgacctt ggtaacctca
     1681 taagaggtct gccaatttcc gacatgaaga agccagcgtc tccgccattt tccgaatccc
     1741 ataaacataa ggaccgttcg ggcataatgt tgcgggaatt ctcagccggc gctctggtgc
     1801 tgcgccagat gcaggaccgt tggtgggtag ccgtgattga gcccggccgc gacggcgaac
     1861 ccgaagaccg caagaacacc atcgcccttc ccaagggcaa cattgactcc ggcgagaaag
     1921 cccctgaagc cgccgcccgc gaagtcaacg aggaaaccgg cctccaggcc cggctcatca
     1981 ccaagctttc tgacatcaag tacgtctatt cccgtacctg gtcagacaac gccaaaatct
     2041 tcaaggtcgt cagcttcttt ctcatgaagt accactccgg ccagatcggc aatatccgtg
     2101 acgacatgaa gcatgaagtc cgccgcgctt ggtggatgcc cctggatgaa gccgccacca
     2161 aactcagcta cagcggcgaa aaacagatgg cccgcaaagc cctcgcctat cttaaagagc
     2221 acggcgacct tgcctgatcc gccgttctca tcgtttgcga tccctatgcg tcctctgcaa
     2281 ttcaggctct aaggtccgga tcggccttca ttcgcgctca tcctcggcgg cgagtgccgt
     2341 gaatcccagc cgccctcggc tgagcaattt actgcaattc gccttatcag tgagatcagc
     2401 gttgatctgc ggtaagcttt tggcctccca attccgcgcg atttcggcgt tgatcccggt
     2461 tcgtcccggc ctcgtcccaa tccgtcccgg ggtcgtcccg gtgggatatc ccggttgatc
     2521 ccgactgtgt cccagtcgat cccgaagcgc ttgcttttgc catccgatca cgagcgatta
     2581 cgcgcgattc cgggattgct tgtcagtttt ccgaggtccc gaaaattact actcggttaa
     2641 cgtttcaacg cggatggggg gaggtcccac ccctccccga aaacaaaaga cttacgtcga
     2701 agctcgccgg aaccttcccg gcgagcttcc cggagccctc cccgaaaatc cgggaagctc
     2761 tttggacttt tcgccgttag gtgccacgcg ccaggtttac cagttcgcta atagctccgg
     2821 aggtgagcta agggccaaag gccaatggct aagggccctc tattcagttt tcaaataccg
     2881 gggccgctct cgcagcaatt cccctgagga aatctcccca gcctacatca cttttcacgc
     2941 acgaagcaac agcgaaaaag gtcaatactg ccgtgggcga aagtactacg caagctctta
     3001 caccgtccaa aacttctaga catcaatcaa gccgcgtgca tccgcgccaa tccgcggtaa
     3061 gttccttgtt taccgaccac ccgatcaccc gattatccga tcaccagatc cctacattcc
     3121 ctggtaattc gaattctgca tctgtaccag cagctgcttc ttcacaccgt taacgctcac
     3181 gtcagacacg tggctcggcc cgttcgccag tcgcgagaac tgcgccgcaa tcgtcaccgc
     3241 gtcagatgga tcgttcaggt acgaggagat ctggaggctc tgcagcatct tctgcgaacg
     3301 gttgaagatc agcgtcactg tatctccggg tttcaaatag ttctggatca tcagccgtac
     3361 ttcgcccggc acgcctgccg gccccagcga gacgttgccc tgctcaaaaa gctgctgcaa
     3421 gcgtccggga tcgggctgca tgtagccctg cgccagctgc gcaatctgct gagcgtactc
     3481 ttcaaactct tccttcttct tctccaccac ccgatgtttc agtccgtgcc tgcggccccc
     3541 gctggaagcc tgctgatcgg gggatcccaa tggctgcttc tgcggtttgc cgtccggccc
     3601 cagcctcacc tgaaacagag actgcttctt gacctcgccc ttcacgctga tggtttgctg
     3661 ctcctgccat gtatattggg ccagctccgc cttgttttgc gccatcgtct gcttgatttc
     3721 cgccacccgc tcccgcaact ccgggttttg cgcgccagcc aggcccgcca cggccagcac
     3781 cgctagcgcg gcaaaagaat ttaagattgc aactgtacgc ttcattggaa aagctccttt
     3841 caatatttct gttctccctt gactctcttt ctgatctcaa ccatgtcgtg gtcaatatgt
     3901 tcccagaatc tttttagccc gctgcacagg taactcaagc cggcgtcgcc ctccggtgtc
     3961 cgtagcagcc ggtttttggg gcactcgcca ttgcaggcga acaggtattc acagtcgcgg
     4021 cagcgcggcg gcaggctcag gaacttggaa aaaccaaact cctgctgcct gcgtgaaaag
     4081 atcatctccg cgctgttttg cccggcaatg ttccccagcc tgtattccgg ataaacgtag
     4141 tggtcgcacg agtagaggct gccatcgtgc tccagcgctg ccgccttgcc gcagaactcg
     4201 tggtagacgc agatctgtgc gtcttttccc atccactgcg ccaccgcggt ctcaaacaga
     4261 tttacaaaga ctttgccgta atcgcggctg aaccagtcgt cccagacttt gcagagaaag
     4321 tatccccagt cgtcgggatc cactgaccag tcggtcacaa tcgaatccgg cgttcccgga
     4381 cgcgccgcgc tcgcgcccat caccggcagg ctctccggcg gccagtgttg cggagccacg
     4441 ctgcgaaact ccttcggctc cacgcaggga atgaactgca tctggaaagg acgtacctct
     4501 cgcttcagga agcggtaaac atccagcggt cgcttcgcgt tctcccggtt gatcacggtc
     4561 agcgagttga agcgtatgcc gtgcctgtgc aggagctggc tcgcggcgaa caccttcttg
     4621 aaagttggcc ggccgtcctt ggccacgcga taacggtcat gcagctcttc cggcccatca
     4681 atactcaggc ccaccagaaa cctgttctgt ttgagaaagc ggcaccactc gtcattcaga
     4741 agcgtgccgt tggtctgcag gtcattctcg attcgctggt tcggcttctt gtacttcttc
     4801 tccagcgcaa ccaccttttc aaagaattcg agacccagca gcgtgggctc gccgccctgc
     4861 caggtaaaaa tcacctcgtc gccatcctgc tgctcaatgt actggcgtat gtgggtttcc
     4921 aggatttcat cagacatgcg aaagcgctgc tcgctgccca gcagctcctg cttgtgcagg
     4981 taatagcaat acgcgcagtt caggttgcag atggccccaa ccggcttcac catcacgtga
     5041 aaacggcgta ccccgttcgc gggcagcgga atagcgggaa actcgagcgt ggaaatggcg
     5101 cacatcggct taatcggtag aatgcattcc gcagtcttgg atagctactg tcagagttga
     5161 cagcggtccg gggaaccaga tctacgtcat aggctgcgat tagctttttt agactgtgta
     5221 gcacaggcgc ctcgcctgtg ccgagagatc gacgtaatta gaagcctcaa ccgaaggaga
     5281 agatcaagca tgtgtggctg gactggagag tgcccgccgg gcaagggcgt ctgtacttca
     5341 aagcccgcta aacgatcgag tcattgatga gacagcttct gaattccttg tgccccgtag
     5401 caggatttgg gggtgaactc tatgccacac accaaaaaag cccgtgcgtc ccccaacgca
     5461 cgggctgccc acagagaggc atactctgct tacttgcctg ggaacttgaa cgtgtagctc
     5521 gcgccgaaca caatggtctg tccttccgga cgcgccttgg ccagatactc tggttcgaat
     5581 ttgaagaatg ccacaaagcc cttcttcggc atgatgaaat tcgtctggaa ccccagcgca
     5641 tgcacctggt aatgcggcgt aatgcccgcc gggatcccgg gtccgatcgt ccctttatca
     5701 tccgtgatct cccactggtc gtagccgata acgcccagtt gaatcagttt gctttcgtct
     5761 ttcgccagcg gcagcatctg cccaaggccc cactcatccg tgaatgcctg gcccggtgtt
     5821 ttgttggtgc cgctcttcac gccgtggcct tcccagttgg tgaacaggct caggctggtg
     5881 cccttgttct ttgtgagata caccgtggtg ccgctgttca ggttgttgcc ccagtagccg
     5941 gaaccaacgt tgtcggtcgc gcccggcgtg tagcggcctg tgggcgccat gaacgcatac
     6001 cctacgttga aggcgatccg gtcggcctgc catcccaggg tcaccggctg tacccacgtg
     6061 tcggcataac ccgtgggaat attattgccg cccgttatcg ctgcaaaacg ctccaggctg
     6121 gctgaaccgt ttgccgcggg caagaccgcg gtcaaagcca gcttcgcacc cgcaatcttg
     6181 aacggcgcaa cgtaggtcac aatgttttca ttgatccaga agcccagatt gccattaatg
     6241 ggcgtgttgc tgccgttggc gttcctcagc gtatctgagt tgtagtggag gctcatgttc
     6301 gtataggtca gccccggctc gggcagcaga cccgaatcca aaccgaactg gcctgtgacg
     6361 tactggcctt tctgttgagc aatggccagc gtggaagcaa gcataagggc aagaagaatg
     6421 aagagagctt tcgactgaga tttcatctgt tcaaatacct ttcttgacct cgcctgggtg
     6481 caaagtttcc tcgaagtggt ggaactgagc ggaggtcatt gcaagaacat ctgcggggga
     6541 acaggttcaa ggaatcttgt aacctacaga gaaaagccgc gcgactggca aaacttacag
     6601 gggcctcatt ttgaatcgtc gctgtaaagg agaggcccgt tccgtggttt gccggaacgg
     6661 gcatgagtac gtgcggtact gcttagatcc cagaggatgt ttcttcaata tccagaaagc
     6721 tgtctcaaaa atgactcgat cgaaataggc tttgtagcac agccctcgcc tgtgccggtt
     6781 tactccactg agttacggag gtttaatctt ctgtttcggt tgaagatttc tcatcccacg
     6841 tcgccaatac cagggatatt cctgctccta ttgaagtacg aacgccgtat ttttcaatgt
     6901 gcggcaaact ttggcggcag actgtcattc tttcggcaca ggcgagggcg cctgtgctac
     6961 acagttaaca aaagctacgt tcagcacgca ggagagaagt cgcccggtca acggccccga
     7021 gctggtacca ggctggttac ttatttttga gatagcttcc agaaacgcat tcctgcgcca
     7081 ctgtcagaac taacagtccg ttcggtcttt caaaaatcac cgtgttaaaa atcagctggt
     7141 gagttgtgac ctgagtcacc gcgctgttgt tccagccgtt atctaatcgc cgcattcccc
     7201 tttcctcaat taagcccccg tacggagtac cagtcatgaa atcacggaat ctcttcggaa
     7261 ctctttatcg gctcctgctc ggttttctta tcgccgcgct ctgcctgccc actctcgcat
     7321 tggaggctca ggaaaatctg aattccaaag cctcgtctgc ggcaactgct tcagccgatc
     7381 ctgcgccgca ggcggacgag gacgccgcag ccgccagccg gctggccaaa gacgcccaga
     7441 acccggtggc caacctcatc agcgttccgt tgcagaacaa caacaatttc aagattgggc
     7501 ccaacgggcg cgctcaggac gtgctcaaca tccagccggt gattccgttg aaactgaatg
     7561 acaaatggat gctgatttcg cgcaccattc agcccatcgt gtggcagccg ttcccgctgc
     7621 agaccgccgg cgggcaatat ggcctgggtg acatggtgga aaccgtgttc ctctcgccgg
     7681 caaagccggg caggctgatc tggggtgttg gccctgcatt aatgattcct accgcaacca
     7741 gcacaatgct gggacaagga aagctcgccc cgggaccctc tgtggtggtc ctcacacaac
     7801 ctcccggttg gacccttggg gctttgatca ataacgtatg gtctgtctcc ggaagcgcca
     7861 atcgcccggc cgtgaaccag atgctcatgc agtgttttgt cacccgcaat ttgcaaaagg
     7921 gttggtacct gaccacatcg ccgatcatta cggctgactg gcgcgcgagc agcggaaaca
     7981 tctggaccgt ccctgtgggc gggggagtag gccgaatcac caagatggga tttcaaccca
     8041 tcaatgcgag ccttcaattt tatggaaatg ctgctcaccc cgcaggggca tcttcctgga
     8101 gcatgcgtac ccagatcgcc ttgctgttcc cgcaactcac ccgtgctcag acgaaaatga
     8161 tcctgaagca gaagctcaac aagatggaag aagaggaccg gcaaaagcag gcggcaaagt
     8221 aggacgggtg tacttatcgt gccgctagtt cgtccagcgc cctgcggtgg tactcaactg
     8281 ccgctgcccg catgtcgtcg cgtgcaacaa atggatgctg catcagccat accaggccgt
     8341 gttcgccata ttggcttagc acgtcatgga caatccagta gccaccgtcg tacgcaacgg
     8401 tttcgtacgt gtatgaccgc tgctcctcgc gtgttgcagg gaagagctgc tcagagagct
     8461 ggcttttggg ttggggaaaa ttgaccctct gaaaaaacag ggctgtccct tcagagagga
     8521 tgtccaaccc cagcttttcc tcccgcgtag aagcatcaaa gcgctgctcc gtaaaccacg
     8581 gccccaggcc gttgcgccgg cttacctggt ccgtcaattc gtgccccagt tcgtggtcga
     8641 gtaattcggc aagctgccgg tcctgcgctg cggtctgtgc gctcaatgcg gttgcccctc
     8701 gcttctggcg ggcattgaac tcatatataa cgtggatagg gaagtagatg gtttcggtct
     8761 ccggcttgta cacgccttca aagccgttgg cgcccgcccc gccgacctgc cattcgagac
     8821 tgaccttcgg ggtccagtcc gtgtcgaagt gaaacaccgt gctctgctga agcttttccg
     8881 ctcggatggc gatcgccttc gccagcacgc tttcatcctc gctccaacct gatgccgcca
     8941 ctctgttcag cgcggccgga gatgttctcc tgtgcagcct gagggctgcg ctgtgagcgc
     9001 ccgccgttgc aagcatgacc gcc
//
LOCUS       DASQYP010000283         4820 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_34170, whole genome shotgun sequence.
ACCESSION   DASQYP010000283 DASQYP010000000
VERSION     DASQYP010000283.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 4820)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4820)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4820
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_34170"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(97..2541)
                     /locus_tag="VE783_09165"
     CDS             complement(97..2541)
                     /locus_tag="VE783_09165"
                     /inference="COORDINATES: protein motif:HMM:NF019335.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxypeptidase regulatory-like
                     domain-containing protein"
                     /protein_id="HYX53611.1"
                     /translation="MIRSLRLCSVLLALLCLAGAAAAQAPSGSVSITVLGSNGQPIAA
                     ALVTLEQNGKAILRERTSAAGTMSFQGLRPGSYHLVVERDAFYPVILDKVEVVSGQKL
                     PVEVRLQAVREYREEVEVVARPSPIDPEQTTAAQSITREDITNIPYPSTRDYRNVLPF
                     IPGVLADSSGQIHVGGSSTQEIQDYIDGFEVSQPASGSLGVRMNPDALRRIEVRSSRY
                     SAQFGKGSGGLTDIEVQDGDNRLRYNATDFFPTFQNVKGFHLNNWTPRAYVSGPIIRN
                     KAWFDVAHEGENDVLIVKQLPDGADSSTTWRTSDLGRLRMNLAPGNVLTATGLLDLFN
                     GEHFNLSPFDPVSTTFNVHQSLYFTGLKDQITVAKDTLLEFGAGFHRTKNVNPTMGDQ
                     PWILRPSIHLGNYYLHSENISDRSQAFANLYLRPWKFLGAHQFTLGGRVDRIVFHGDN
                     LRQPVLIQDDNGVPLRTINFSNISAPFFSLSTLESSAYLQDRWLPSARTVIEAGARWD
                     RDSFVNRDVFSPRIAGTVLLAKASETKITAGIGIYYDRSNLSLFSQSVQGSRSDAQLF
                     APVPFTIFSAFTANPAQLPLPRFVNWSAGIERRLPWSIYGRIDYLKKTGNGIWAYELQ
                     PDGSYILQGRRQDRYDGVQLTVRKELKRGYPFAFSYTRSHARTNEAIDFSIDNFTSGP
                     QLGGPMVWDAPNQVTSWGSYPLPSFWKFRKFDFYFSALWRSGYPFVTINQFNQLVQGP
                     GAHRFPDFLTLNPAIEKKFNFHGYRWAARAAIENVTGSTNPEVVDNNINSPTFLTFFG
                     LGHRTFNGRIRFLGRQ"
     gene            complement(2679..3644)
                     /locus_tag="VE783_09170"
     CDS             complement(2679..3644)
                     /locus_tag="VE783_09170"
                     /inference="COORDINATES: protein motif:HMM:NF013970.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAM domain-containing protein"
                     /protein_id="HYX53612.1"
                     /translation="MSAVVVLFEIRLRTMSLKRLIGAVIGSILGILGAYLFSVVLKNS
                     ITHPETQRFMQLMVMLLMSYVGLVVGANKGDLLNLAALGGIFGAEKQGRKAFKLLDTS
                     VIIDGRIADIADTGFMDGILVIPQFVLRELQLVADSADSLKRNRGRRGLDILQRLQKI
                     ANVNVQIVEDDFPTVREVDLKLIELAKVYEAKIITNDFNLNKVAQLQGVEVLNINELA
                     NALKPIVLPGETMRVFILKEGKEYNQGVAYLDDGTMVVVDNARKLIGKNVDIAVTSVL
                     QTTAGKMIFGKFDERQRPAEPKPESRQEQRKPQPIVVESAPHTNE"
     gene            complement(4154..>4820)
                     /locus_tag="VE783_09175"
     CDS             complement(4154..>4820)
                     /locus_tag="VE783_09175"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53613.1"
                     /translation="YHEFWATQRKRLTDVNAERKRAIDVGPLTLGYRLATAKTGVNIP
                     RDLLYTKGGYVLQMLRFMMQDSTAKDVDARFKAMMTDFCNSFPERPASTEDFKAFVDK
                     HMTPEMDLAHDHTMSWFFNEYVYGTQLPSYRFEHTFTTRPDGALALKFKLTQSNVDEH
                     FMMLVPIYMEVESGQIVRVGRLPIRGNNSVEHEVVLKGIQKKPRRAMIAYLDDVLGQI
                     ENK"
BASE COUNT         1083 a         1294 c         1422 g         1021 t
ORIGIN      
        1 gcaaacatca caagccgcac aaacctcaag ggcacaccga agtggtttta gacaagaaga
       61 agccggttgc ggcaaagaag cccggccaac gcggtgctac tggcgtccga ggaaccgtat
      121 ccggccgttg aaggtcctgt ggccaagacc aaagaatgtc aggaatgtcg gcgagtttat
      181 gttgttgtcg accacctcag gattcgtgct gccagttacg ttctcaatgg ctgctcttgc
      241 tgcccagcga tagccgtgga aattaaactt cttctcgatt gccgggttga gcgtaaggaa
      301 atctggaaac cgatgtgcgc ccggtccctg caccaactgg ttgaattggt tgatggtgac
      361 gaatggatat ccgctacgcc acaaggctga gaagtaaaag tcgaatttgc ggaacttcca
      421 gaatgagggc agcggataag agccccacga ggtcacctgg ttgggagcat cccaaaccat
      481 tggacctcca agctgcgggc cagatgtgaa gttgtcgatg gaaaagtcga tggcctcgtt
      541 ggttcgggcg tgagatctcg tgtacgagaa tgcgaagggg tagccgcgct tcagctcttt
      601 gcgcacggtc agctgcacac cgtcataacg gtcctggcgc cgcccctgaa ggatgtatga
      661 gccgtccggt tgtagctcat acgcccagat gccattgccc gtctttttca ggtagtcaat
      721 gcggccatag atactccacg gcaggcggcg ctcaatgccg gcgctccagt tgacgaagcg
      781 cggcagcggc agctgagcgg gattcgccgt gaaggcggaa aagattgtga acggtacggg
      841 cgcgaacaac tgcgcatctg agcggctgcc ctgcactgac tggctgaaaa ggctcaggtt
      901 tgaacgatcg tagtagatgc cgattccggc ggtgattttc gtctcgctgg ctttggcgag
      961 aagaacggta ccggcgatgc ggggcgaaaa gacgtcgcga ttcacgaagc tgtcgcggtc
     1021 ccagcgagca cccgcttcga taacggtacg cgcggagggc agccagcgat cctgaaggta
     1081 cgcgcttgac tcgagcgtgc tgaggctgaa aaacggtgcg ctgatattgc tgaagttaat
     1141 ggtgcgcagc ggcacgccat tgtcatcctg gatcaggacc ggctggcgga ggttgtcgcc
     1201 atgaaagaca atgcgatcga ctctccctcc cagagtgaat tggtgcgctc ccaggaactt
     1261 ccacggccgg agatacaggt tggcaaacgc ctggctgcga tcagaaatgt tctcgctgtg
     1321 caggtagtag ttccccagat ggatggaagg ccggaggatc cacggctgat cgcccatggt
     1381 gggattcacg ttcttggtgc ggtgaaaacc tgcgccgaat tcaagcagcg tgtctttggc
     1441 gaccgtgatc tggtctttca atcccgtgaa gtagagggac tggtgcacgt tgaacgtggt
     1501 agagacggga tcaaaaggcg agaggttgaa atgctcgccg ttaaatagat caagcagccc
     1561 tgtggcagtg aggacgttcc cgggagccag attcattcgc aagcgaccca ggtcagaggt
     1621 acgccaggtg gtgctgctgt cagctccatc gggaagttgt ttcacgatca aaacgtcatt
     1681 ttcgccttca tgcgccacat caaaccaagc cttgttgcga atgatggggc cggagacgta
     1741 ggcgcgcgga gtccagttgt tcaggtggaa ccctttaacg ttttgaaatg tggggaagaa
     1801 gtcagtcgcg ttgtagcgga gccggttatc gccgtcctgg acttcaatgt ccgtgaggcc
     1861 gcctgagcct ttgccgaact gcgcggagta gcggctgctg cgaacctcaa tgcggcgcag
     1921 cgcgtcaggg ttcatgcgaa cgccaagaga gccgcttgcg ggctggctga cttcaaaacc
     1981 gtcaatgtaa tcctgaattt cctgcgtgct cgagccgcca acgtggatct ggccagagct
     2041 atccgccagc acgccgggaa tgaaaggcag cacgttgcgg taatcgcgcg tggagggata
     2101 ggggatattg gtgatgtctt cccgcgtgat cgactgcgca gccgtggtct gctccggatc
     2161 gatgggggaa gggcgggcga ccacttcgac ttcctcgcga tactcacgca cggcctggag
     2221 gcgcacctcg accggcagtt tctgtcctga gacgacttca actttgtcca ggattacagg
     2281 ataaaaggcg tcgcgttcca caaccagatg gtaagagcca ggccgaagcc cctgaaacga
     2341 cattgttccc gcggcggagg ttcgctcccg cagaatggct ttcccattct gctcaagagt
     2401 caccagggcg gcagcgatgg gctggccatt cgagccgagc acggtaatgc tgacgctgcc
     2461 tgagggggcc tgcgcagcgg cggcgcccgc aaggcacaac agtgcaagga ggacggagca
     2521 cagcctaagg ctgcggatca caatatggtg ctggcaaatc acggatgaag accggccgcg
     2581 cggacttgcg gcgggaagcg gcttgcttct gattttagcc gcaatgtgac ggaacgcacc
     2641 agctcaggcg tacatggccc cattgcggcc cagagcggtt attcgtttgt atgcggcgcg
     2701 gattccacca cgatcggctg tggcttgcgt tgttcctgcc ggctttccgg cttgggctcc
     2761 gccgggcgct ggcgctcatc gaacttgccg aaaatcatct tgcctgcggt ggtctggagc
     2821 actgacgtaa cggcgatatc cacgttcttg ccgatcagct tacgcgcatt gtccactaca
     2881 accatggtgc catcgtccag gtaagcgacg ccctggttat attccttgcc ttccttcagg
     2941 atgaagaccc gcatggtctc gccgggaagc acaataggct tgagcgcgtt cgccaactca
     3001 ttgatattca gcacttccac gccctgcaac tgggcgactt tgttgagatt gaagtcattg
     3061 gtgatgatct tggcttcata aaccttggcc agttcgatca gcttaagatc gacttcgcgg
     3121 actgtgggaa aatcgtcttc cacgatctgg acattcacat tggcaatttt ttgcaggcgc
     3181 tgcagaatgt cgagcccgcg gcggccgcgg ttgcgcttga gagagtcggc agaatcggcc
     3241 accaactgca gttcgcgcag aacgaactgt gggatcacca gaatgccatc catgaagccg
     3301 gtgtcggcga tgtccgcgat acgaccgtca atgatcacac tggtgtcgag gagcttgaaa
     3361 gccttgcggc cctgtttctc cgctccgaag atgcctccca gcgctgccag gttgagcagg
     3421 tcacccttgt tcgcgcccac caccagaccc acgtacgaca tgagcagcat gaccatgagc
     3481 tgcatgaagc gctgggtttc cgggtgagtg atgctgttct tcagcaccac gctgaacagg
     3541 taggctccca gaatgccaag aatgctgccg atcaccgctc cgatgagccg cttaagactc
     3601 atggtgcgaa ggcggatttc aaacaagacc acgacggcgc tcatcaggat tcccgcgcct
     3661 aatgcaggca ttccagagag gccaaaagga tgaagaaacc agcaagccgt agtaacaact
     3721 gcaatgaaaa ttaagcgaat aagcaacagg tccataatgg gaccctcccc accgggggca
     3781 gcgacaagaa acaggtaaga attaaaaaac cgctaaaaaa ttcgggaata ccgattttaa
     3841 gcagcggccc ccaaacgcac agctcctgcc ggagctgtga aaaatgaaaa attgcgctcc
     3901 agcaaaaagt attcggcaca gtatacatca gccagcatac gtctgagccg gtcttccaag
     3961 ttatctctga agtaaacaga gtagctgccc tttattgttg acctgagcaa caccagcagg
     4021 cattttggaa ggagcagcag attctttctt ttctccagaa agttgtttca ctcacaagtt
     4081 ggccgaagca gatgagcggc ctgagaagcc ggcgctgatt gtctcggggg agaaataagc
     4141 gccggtttca ctttcacttg ttctcgattt gaccgagcac gtcgtccagg taagcaatca
     4201 tggcgcgcct gggcttcttc tggatgccct ttaggacaac ttcatgctct acggaattat
     4261 ttccccgaat gggcagccgc ccgaccctta caatctggcc cgattcaacc tccatataga
     4321 tgggcaccag catcatgaaa tgctcatcta cattggattg agtaagtttg aacttcaggg
     4381 caagagcgcc gtccggtcgc gtagtgaatg tgtgctcaaa ccggtacgag ggcagctgag
     4441 tgccgtagac gtattcgttg aaaaaccacg acattgtgtg gtcatgggcc aggtccatct
     4501 caggcgtcat atgcttatcg acgaaggcct tgaagtcctc ggtgctcgca ggccgctccg
     4561 ggaatgagtt gcagaaatcg gtcatcattg ccttgaagcg ggcgtccacg tctttggcgg
     4621 tgctgtcctg catcatgaag cgcagcatct gtaagacgta tccgcctttg gtatagagca
     4681 ggtcacgagg gatattgacg ccggtttttg ccgtggcaag ccggtaccca agcgtcaatg
     4741 gaccgacatc gatcgcacgt ttccgctcgg cgtttacgtc agtcaatctc ttccgctgtg
     4801 tcgcccagaa ctcgtgatat
//
LOCUS       DASQYP010000284         7482 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_201142, whole genome shotgun sequence.
ACCESSION   DASQYP010000284 DASQYP010000000
VERSION     DASQYP010000284.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 7482)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7482)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7482
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_201142"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            73..423
                     /locus_tag="VE783_09180"
     CDS             73..423
                     /locus_tag="VE783_09180"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53614.1"
                     /translation="MHRLALATFLFGLVVFSMAAQQPSPSPTPSPTGSLTPSTMTPSD
                     ITPTPTPTPGQAPSASGNPSPTATPTASPSPTPDPMSATPSPTATPTPTPLAASTGLG
                     SASPTPSPTPKAQR"
     gene            622..2058
                     /locus_tag="VE783_09185"
     CDS             622..2058
                     /locus_tag="VE783_09185"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53615.1"
                     /translation="MATRALRLFAFSACLALASAVAGFGQSVPITVGPLTVSVPPGWT
                     GQVNAVPVRIFAPGSTPQQFFSVEFFPPDPRPQALADHHGQIWGRIASTFHITTPPQS
                     GMSGRFVWTRSDVPRAFGRKETFILYSAGTGSAFVDVAVQASRADLVSKHLPVLETML
                     RNAVLSDDGSGPSASVPPVAAGTGNIPPGAAGAPGSLSGYVYQTPAGWTSNQYSDGIV
                     ITSPVSETGERCLISMWPMRSSSGNLLHDADLAFRDIYKTYQLKSQTSSGMIQSSLIR
                     GTSSQGWDYVMIKRGIAKPGGRYETLLGFVLAAKLDSRVAIVSGLSKEPLISACMGEL
                     RSSTVWPKFFYGLGFKNWAAPDQTPALRKKLAGKWTAATATAADQFTFAGNGRYASAA
                     AAQQYTLLSSMELLTTTQAYFGNGSYTLRGSAITLVQDDSKTQPETGFFRVEEESKDE
                     GRSWEESLYLLRTSAIDGQPYELRYKKR"
     gene            complement(2123..3973)
                     /locus_tag="VE783_09190"
     CDS             complement(2123..3973)
                     /locus_tag="VE783_09190"
                     /inference="COORDINATES: protein motif:HMM:NF024371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3857 domain-containing protein"
                     /protein_id="HYX53616.1"
                     /translation="MKSDAAHPGNAVILYREETSDDNRRHRLVYMRIKILTERGREEA
                     SVHIPYDEQFGITDVRGRTISPDGTITPLTEKAYDTMLFKGAGHKVRAKSFAMPNAQV
                     GSIIEYKYTEYWDNWVISPHWVIQESLPQLRAKFTFIPYHGNYDIVSSDDEILNRVFS
                     VTSGNMPKEAAIKRTTNDNMELEMRDIPAFVEEDLAPPSDLLKMRVDFYYGNEKMIKP
                     DDYWKDQGKRWNKSVEKFIGHSPEVAAAARAAIAPADTPDQKARKIYALVESFKNTSF
                     IPDPSNDLKAKGHEDTAADILRRKSGSQSDLVRLFVALARASDLQAFVMRVVDREQVF
                     FQKELPNKQQLSDEIAIVAMPDGKEIFLEPGTPLCPYALLNWKHSNVKGIRQTKDGGT
                     LLAETPAPRYTEAITQRIARLAVSGEGNASGKIKMVWLGQEALSRRVSGLKTDEAGRK
                     KDLEDEVRSLLPNGSTVKFESAAGWDNPDSALAATFNVDIPTLAAATGKRLLVPTGLF
                     ESNSKRLFAAEQRKYPVYLSYPYRTLDDVQFTYPADYKVENLPQSQPVQTDFAIYKFE
                     RKESGNAISLNRDFAIAGIGFPLQFYPELRRFYGEVNAGDSQQLVLTAAK"
     gene            complement(4243..5007)
                     /locus_tag="VE783_09195"
     CDS             complement(4243..5007)
                     /locus_tag="VE783_09195"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53617.1"
                     /translation="MRSLLSVSAACLLVLLVAMAVAPPASAQARLDIFVTPIPNAPFS
                     GTIHVERSTVMRDGSIVQLQTVRDIHRDSKGRIYNEARTLLPAGSKENPKVIGVLLYD
                     PQTRISTHLDPQKHVFSSGTVNRPPETEPPVFNHASPNGGSVPMSEFTRQEDLGNREM
                     DGVTVHGLREIQVIPAESSPTGKEITVTDEYWYSADLRINMMLRHNDPRTGSVTMTVT
                     GVTRTEPDPALLQIPEGYVSAAAYREAKQQKPEQQQ"
     gene            complement(5134..5715)
                     /gene="kdpC"
                     /locus_tag="VE783_09200"
     CDS             complement(5134..5715)
                     /gene="kdpC"
                     /locus_tag="VE783_09200"
                     /EC_number="7.2.2.6"
                     /inference="COORDINATES: protein motif:HMM:TIGR00681.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008556 - P-type potassium transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006813 - potassium ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="potassium-transporting ATPase subunit KdpC"
                     /protein_id="HYX53618.1"
                     /translation="MKKDFITSMLYTAATTLLLGLLYPLAMTGLAHLLSKDKADGQLI
                     RRDGVLIGSRLLAQPFTGVAYFHPRPSAAGSNGYDASNSGGTNFGPTNQKLVDRVKSD
                     VASLQAENPGRAVPVDLVTTSASGLDPHITPAAAAFQLPRVAKARSITEQQLREIVQI
                     HTEGRQFGFLGEPRVNVLELNLDLDTRYPVKAR"
     gene            complement(5727..>7482)
                     /gene="kdpB"
                     /locus_tag="VE783_09205"
     CDS             complement(5727..>7482)
                     /gene="kdpB"
                     /locus_tag="VE783_09205"
                     /EC_number="7.2.2.6"
                     /inference="COORDINATES: protein motif:HMM:TIGR01497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031004 - potassium ion-transporting
                     ATPase complex [Evidence IEA];
                     GO_function: GO:0008556 - P-type potassium transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006813 - potassium ion transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="potassium-transporting ATPase subunit KdpB"
                     /protein_id="HYX53619.1"
                     /translation="SLPDETPEGRSIVVLVSAGEVIPGDGDIIEGVASVDESAITGES
                     APVIREAGGDRSAVTGGTRVLSDQIKVKITSNPGETFLDRMISLVEGAERQKTPNEIA
                     LNILLAGLTVIFLLAVVTLQPFAIYSGAPQTVFVLVSLLVCLIPTTIGGLLSAIGIAG
                     MDRLVQHNVLAMSGRAVEAAGDVDVLLLDKTGTITLGNRQATNFIAAPGVSNDQLADA
                     AQLSSLPDETPEGRSIVVLAKEKYGLRGRDLTVKAAYDSAPAEGSGGGRAVLTRQAEF
                     VPFSALTRMSGVNFDGRVIRKGAADSIRKYLEQSGSYLPKEVQATVEGIARSGGTPLV
                     VAENNRTLGVVELKDIVKGGIHERFSQLRAMGIKTIMITGDNPLTAAAIAREAGVDDF
                     LAQATPKDKMDLIRKEQSEGKLVAMTGDGTNDAPALAQADVGVAMNTGTQAAKEAGNM
                     VDLDSNPTKLLEIVEIGKQLLMTRGSLTTFSIANDVAKYFAIIPAMFAGKFAVLNALN
                     IMKLATPQSAILSAVIFNALIIIALIPLALRGVQYKAMSAESLLRRNLLVYGLGGVVA
                     PFIGIKVIDLIVRSLGLA"
BASE COUNT         1542 a         2240 c         2055 g         1645 t
ORIGIN      
        1 tcgcctcagt tctgctcaac cctattcgcg cacactgaat cgcacttcaa agatgaaatc
       61 aggaggggaa gtatgcatcg cctggcactc gcaacgtttc tctttggact ggtcgtattc
      121 agtatggcgg cacagcagcc gagccccagc ccgactccat cgcccacagg cagcttgacc
      181 ccttccacca tgactccttc ggacatcacg cccacgccaa ctcccacgcc gggccaggcg
      241 cccagcgcct ccggaaatcc cagtccaaca gcgactccta ccgcttcacc aagtccgact
      301 cccgatccaa tgtccgctac gccctctcca accgcaacgc caactcccac tccactggcg
      361 gcaagcactg gcctgggatc agcaagccca acgcccagcc ccacgccgaa ggcacagcgg
      421 tagagacatc aagaatattt gcctaaagag cacgctggca tctctgcgtg cggaattgtg
      481 gtgcttccag attcacttca ctgtgcatgg gtaaggcgat tgcccgtcgc ggatcaataa
      541 agagctttat aaaaatcctg cgacacgata cgcctgaatg atagaatccg cagccatcat
      601 ctttgctgca aggagttcca gatggctaca cgggccctgc ggctttttgc tttttcggca
      661 tgccttgctc tggcaagcgc cgtcgccggt tttggtcaga gtgtgccgat cactgttggc
      721 cctctcacgg tcagcgttcc gcccggctgg accgggcaag tcaatgctgt tccggtgagg
      781 atcttcgcgc cgggctccac accgcagcag tttttctccg ttgagttctt tcctcctgat
      841 ccgcggcctc aggcactcgc ggaccaccac gggcagatct ggggacggat tgcatccaca
      901 ttccacatca ccactccgcc ccaaagcggc atgagcggcc gtttcgtctg gacacgtagc
      961 gacgtaccgc gggccttcgg acggaaggaa acattcatcc tctacagcgc aggtaccggc
     1021 agcgcgtttg ttgacgtggc ggtgcaagcc tcgcgcgccg accttgtttc caaacatctt
     1081 ccggtgctgg agacgatgct gcgtaacgca gtactgtccg atgatggttc agggcccagt
     1141 gcttccgtcc ctcctgtggc ggctggcact ggcaacattc cgcccggagc ggcgggggct
     1201 ccaggctccc tgagcggcta cgtttatcag acgcctgccg gatggacctc aaaccagtat
     1261 tcagacggca tcgtcattac atctcctgtt tcggaaaccg gcgagcgctg cctcatcagc
     1321 atgtggccca tgcggtctag cagcggcaat ctgctccatg atgctgatct ggctttccgg
     1381 gacatttaca aaacctatca attgaagtca cagaccagct caggcatgat tcaatcatcc
     1441 ctcattcgcg gcacgtccag ccagggatgg gattacgtca tgatcaagcg tggcatcgcc
     1501 aaacccggcg gacgatatga aactcttctc gggttcgtac tcgcggcaaa gctcgactcg
     1561 cgagtcgcca tcgtgtctgg cctttccaaa gagcctctca tcagtgcctg catgggcgag
     1621 ctcaggtcca gcactgtgtg gccaaagttc ttttatggtc tcggattcaa gaactgggct
     1681 gccccagacc agacgcctgc gctccgcaag aagctggcgg gcaagtggac ggcagccaca
     1741 gcgaccgccg ccgaccagtt cacattcgcc ggtaacggcc gctatgcgtc agcggcagcg
     1801 gcgcagcaat atacattgct ttccagcatg gagttgctaa ccaccacgca ggcatatttc
     1861 ggcaatggca gctacacgct caggggaagc gccatcacgc tggtccagga tgatagcaaa
     1921 acccaacctg agactggctt ctttcgcgtg gaagaagaga gcaaggacga aggcagaagt
     1981 tgggaagaat cgctctacct gctaagaacc agcgcgattg atggacaacc ttacgagctc
     2041 cgttacaaga agaggtgagt tgtgcgaggc cgaaaaacag ccgacctcac ttcaacctgg
     2101 ttctggcagg aacagcctca ccctacttcg ccgccgtcag caccagctgc tgtgagtctc
     2161 cggcatttac ttcgccatag aatctgcgca gctcgggata gaactgcagc ggaaaaccaa
     2221 tgccggcaat ggcgaagtcg cggttcaggc tgatggcgtt tccactctcc ttgcgctcga
     2281 acttataaat tgcaaaatcg gtctgaaccg gctgcgactg cggaaggttc tccaccttgt
     2341 aatccgccgg ataggtgaac tgaacgtcat ccagcgtgcg atacggatag ctgagataga
     2401 cgggatactt gcgctgctca gcggcgaaca ggcgtttgct attgctttca aacaggcctg
     2461 tgggcaccag caaacgcttg ccggtggctg cggcgagcgt cggaatgtct acattgaaag
     2521 ttgccgcgag tgcggaatca gggttgtccc aaccggctgc ggactcaaac ttcacggttg
     2581 atccgttcgg caacaacgat cgtacttcgt cttccaggtc cttcttccgg ccggcttcgt
     2641 ccgtcttcag tcctgagacc cggcgtgaca gcgcctcctg tcccagccat accattttga
     2701 ttttcccgga agcattgccc tcacctgaaa ctgccagccg ggcaattcgc tgcgtgattg
     2761 cctcggtgta gcgtggtgcc ggcgtctccg ccaagagcgt cccaccgtct ttggtctgcc
     2821 gtattccctt aacgttgctg tgcttccagt tcagcaatgc ataaggacat agcggagtgc
     2881 cgggttccag aaaaatctct ttcccgtcag gcatggcgac aatcgcgatt tcatcagaca
     2941 actgttgctt gttcggcagc tccttctgga aaaacacctg ttcgcgatcc acaacgcgca
     3001 tcacgaaagc ttgcaggtcg gaggcgcgtg ccagcgccac aaagagccgc acaagatcgc
     3061 tctggctccc gcttttacgg cgtaaaatgt cggcggctgt gtcttcgtgc ccttttgctt
     3121 tcaagtcgtt ggatgggtcc ggaatgaatg aagtgttttt gaagctctca accagcgcgt
     3181 agatctttcg cgctttctgg tctggagtat ctgccggtgc aatggcggcg cgcgccgcag
     3241 ctgcaacctc cggcgagtga ccaataaact tttccacact cttgttccat ctcttgccct
     3301 ggtccttcca ataatcgtcc ggctttatca tcttctcgtt gccatagtaa aaatccacgc
     3361 gcatcttgag aagatcggaa ggtggcgcaa ggtcttcctc cacgaacgcc gggatgtccc
     3421 tcatctccag ctccatgttg tcattggtcg tgcgcttgat tgccgcctcc ttcggcatgt
     3481 tgccggaagt gacggagaac acgcgattca ggatttcgtc gtcagaactt acaatgtcat
     3541 agttaccgtg gtacggaatg aacgtgaact tggcacgaag ttgcggcagg ctctcctgaa
     3601 tgacccagtg cggtgagatt acccagttgt cccagtactc cgtgtatttg tactcaatga
     3661 tgctgcccac ctgcgcattg ggcatggcga agctcttggc ccgcactttg tgtccggcgc
     3721 ccttgaataa catggtgtcg tacgcttttt cagtcagagg cgtaatagtt ccatccgggc
     3781 tgatcgttcg gccgcgcacg tcggttatgc cgaactgttc atcataagga atatgaacgc
     3841 tggcctcttc gcggccacgc tcagtcagta tcttgatgcg catgtaaacg agccggtgtc
     3901 gtcgattgtc gtcggacgtc tcttcgcgat acagaatgac ggcattaccc ggatgggccg
     3961 cgtctgactt catctgaagt tcttcggggg tgggcggtag ccactcgtca aacgctcgag
     4021 cactggtggg acggataaaa caggctagac agaacagacc tataataaga cgcaactccc
     4081 gcaatgggca ccccggcaag ccatcagagt tgctggctgc ggttgctttt atacctcaag
     4141 aaaacctcac gatcaattgc aaattgcctt gcctggagta ctttggggcg ggctgctccg
     4201 ggttgccggc cgaagcttaa accgcgccgc gtatgaattt atttattgct gctgttctgg
     4261 tttctgttgc tttgcttccc ggtaagcggc ggctgagacg tagccttcgg gtatctgcag
     4321 cagcgccgga tcgggctcgg tacgggtcac ccccgtgacg gtcatcgtca ccgaacctgt
     4381 acgcggatcg ttgtggcgga gcatcatgtt gattcgaaga tcagcggagt accagtattc
     4441 gtctgtgact gtaatttctt tacccgtcgg actgctttca gccgggataa cctggatctc
     4501 gcgaaggccg tgtaccgtca cgccatccat ctcgcggttt cccaaatctt cctgccgggt
     4561 gaactcgctc atcggaacac taccgccgtt tggcgaagca tgattgaaaa ccggtggctc
     4621 ggtttcaggc ggccgattta ctgtgccgct gctgaacacg tgcttctgcg gatccaggtg
     4681 agtagaaatg cgcgtttgcg gatcgtacaa cagtaccccg atcacctttg gattttcctt
     4741 gcttcctgcg ggcagcagag tacgggcttc gttatagatc cggcccttgc tatcgcgatg
     4801 gatatcccga accgtctgca gctggacgat cgatccatca cgcatcacgg tggaacgttc
     4861 cacatggatg gtgccactga acggggcgtt tggaataggt gtgacgaaga tatcaagacg
     4921 cgcttgcgcc gaagcgggtg gagcgacggc cattgcaacc aggagaacca gcaaacaagc
     4981 agcggacaca gataacagcg aacgcatctg tacctccatt caggtactca ggacttctag
     5041 catacgtccg caactcttat cgctgcaaga tactttgctt cttttaacac attcttatga
     5101 gagttcaggc cgagcctgct taagcgcgcg gagctagcgg gccttaactg ggtaccgcgt
     5161 atctaaatcc aggttcaact ccagcacgtt cacgcgcggt tcgccgagaa atccaaactg
     5221 gcgcccttcg gtatgaatct gcacaatctc gcgtagctgc tgttcggtga tgctgcgagc
     5281 ctttgctact cggggcagct ggaaagccgc ggccgcaggc gtgatgtgcg gatccaggcc
     5341 ggaagcggat gttgttacca ggtcaacggg gacagccctg ccgggattct ctgcctgcag
     5401 gctggcgaca tctgacttca cacgatccac cagcttttga ttcgtcggtc cgaaattcgt
     5461 tccgccggag ttgctggcat cgtaaccgtt gctgccggcg gcagacggcc gcgggtggaa
     5521 gtaggccacg ccggtgaacg gctgcgccag cagccgggaa ccaatgagta cgccgtcgcg
     5581 ccggatcaac tgcccgtcag ccttatcttt gctgaggaga tgcgcaaggc cagtcatagc
     5641 caacgggtac agcagcccca acagtaaagt tgttgccgct gtgtaaagca tcgacgttat
     5701 gaagtctttc ttcatcgctt actccttcag gccagcccca gagaacgcac gatcaggtca
     5761 atcactttga tacctataaa tggcgccacc actccgccga gcccatagac aagcaggttg
     5821 cggcgcagca gggattcggc gctcatggcc ttgtactgca cgccgcgcag tgccagcgga
     5881 atcagcgcga tgatgatgag cgcattaaag atcaccgcgg acaaaatcgc ggactgggga
     5941 gtggcgagct tcatgatgtt taacgcgttc agcacagcaa atttaccggc gaacattgcc
     6001 gggatgatgg cgaaatactt cgccacatca ttcgcaatcg agaacgttgt aagcgagccg
     6061 cgcgtcatca gcagttgctt accaatttcc acgatctcca gcagcttggt ggggttcgag
     6121 tccagatcca ccatgttgcc ggcttccttc gcggcctggg tgccggtgtt catcgccacc
     6181 ccgacatcgg cctgggccag agcgggcgcg tcgttcgtgc catcgccggt catcgcgacg
     6241 agctttcctt cgctctgctc tttgcggatc aggtccatct tgtctttcgg ggtggcctgg
     6301 gcaaggaagt catccacgcc ggcttcgcgc gcgatggccg ccgccgtgag cgggttatca
     6361 ccggtgatca tgatggtctt tatgcccatg gcccggagct gggagaagcg ctcgtggatg
     6421 ccgcctttga caatatcttt aagctcaacc acgccgagag tgcggttatt ctctgcaacc
     6481 accagcggcg tgccgccgga gcgcgcaatt ccctccaccg tggcctgcac ttctttggga
     6541 agatagctgc cactctgctc aagatatttg cggatggaat ccgcggcgcc tttacgaatc
     6601 actcggccat caaagttcac gccggacatc cgggtcagtg cgctgaaggg aacgaattca
     6661 gcctgcctgg tgaggaccgc acggccgccg ccgctgcctt ctgccggcgc tgaatcgtaa
     6721 gcagctttta ccgtgagatc tctcccgcga agtccgtact tctcttttgc cagcaccaca
     6781 atcgaacggc cttccggggt ttcatctggc aaagaggaaa gctgagccgc atcggcgagt
     6841 tgatcattgc ttacgcccgg agcagcgata aaattcgtcg cctggcgatt gcccagcgta
     6901 atggtgccgg ttttgtcgag gagcagtaca tccacgtctc ccgccgcctc cactgcacga
     6961 cctgacatgg ccaacacgtt gtgttgcacc agccgatcca ttccggcgat gccaatggcg
     7021 gaaagcaagc cgccgatcgt ggtcggaatg aggcagacca gcaatgacac cagaacaaac
     7081 accgtttgcg gcgcgccgga gtagattgcg aacggctgca acgtgaccac cgccagcagg
     7141 aagatcaccg tgagtcccgc aagcaggata ttcagcgcga tttcgttcgg tgttttctgc
     7201 cgctccgcgc cttccaccag cgaaatcatt cgatccagaa aagtctcgcc cggattcgag
     7261 gtgatcttca ctttaatctg gtcagagagc acgcgcgtgc cgccggtcac tgcggaacga
     7321 tcgccgccag cctcacggat caccggcgct gactcgccgg taatggccga ttcgtcaacc
     7381 gaagcgacgc cttcaatgat gtcgccgtcg ccgggaatca cctcgcccgc ggataccagc
     7441 accacaatcg aacggccttc cggggtttca tctggcaaag ag
//
LOCUS       DASQYP010000285         4899 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_188174, whole genome shotgun sequence.
ACCESSION   DASQYP010000285 DASQYP010000000
VERSION     DASQYP010000285.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 4899)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4899)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4899
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_188174"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..320)
                     /locus_tag="VE783_09210"
     CDS             complement(<1..320)
                     /locus_tag="VE783_09210"
                     /inference="COORDINATES: protein motif:HMM:NF012334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HYX53620.1"
                     /translation="MANLLEGKVAIVTGAARGIGQATAELFAQHGAKVVMSDIDPDPL
                     KEAAAAISKNGGQVHPFPGDVTDPKFPDNLVQATLNKFQALDVIVNNAGYTWDGVVHK
                     MTDQ"
     gene            complement(402..2012)
                     /locus_tag="VE783_09215"
     CDS             complement(402..2012)
                     /locus_tag="VE783_09215"
                     /inference="COORDINATES: protein motif:HMM:NF004837.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fatty acid--CoA ligase"
                     /protein_id="HYX53621.1"
                     /translation="MNIPLTPLRFLRYASQQYPRKVGVICGEQRYTYSQFAERAARLG
                     GALRALGVQPGDRVAFLSGNCHRLLEGYYGVLEAGAVLLPLNIRLTPHELAYILNDSG
                     AKVLLFQEQFAPMVDGFRAELKTVEGYVALDHTPASWAFSQNYEQLLSSASPQQLEIT
                     KVDENSLAELFYTSGTSANPKGVMLTHRNIYLHALNVTITFNTGADSVELHTIPLFHA
                     NGWGVAHSLTYVGGTHVMIGKFDPPEVFRLIEREKVHACSLVPTMATALVHCPDRPKY
                     DLSSLRRITLGGAAASPTLVRQVEDRIGCICFSGYGLTETSPVLTTAQKKLGVNWEGD
                     ERFEGQARTGYALPGVEIRIVDSEDRDVPHDGQSIGEIIARSDGVMDGYWKQPEATAE
                     VMRGGWFHTGDMATMDENGYILIVDRKKDIIVSGGENISSLEVEKAMLAHPAIYEVAV
                     IPVPDPRWGEIPKALVALKPGVQATEQEILDFTRSRLSHYKCPRSIEFMDTLPKTGTG
                     KILKKELRKKYWSGTESIRPEMATKTSN"
     gene            complement(2026..2814)
                     /locus_tag="VE783_09220"
     CDS             complement(2026..2814)
                     /locus_tag="VE783_09220"
                     /inference="COORDINATES: protein motif:HMM:NF006070.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HYX53622.1"
                     /translation="MSIPLNRNVRELFDLSGRVAVITGGSIGLGKQMAEGLAEMGAHV
                     VLCARKKERCEETAHELAKLGIRTAAFACDVKSPDSVSKLFHDAVSQFKRVDILINNA
                     GISWGAPIEQMKLEDWNKVLETNLTGTFLCCQAAGKIMVPQERGKIINVSSIAGLRGS
                     PPGVVDAVGYHASKGGVIAFTKDLAWKWAQHNIQVNALAPGWFPTHMSGWVIENKKET
                     LLSHIPLRRFGTDYDLKGAAVFLASAASDYVTGHVLAVDGGQSA"
     gene            complement(2825..4495)
                     /locus_tag="VE783_09225"
     CDS             complement(2825..4495)
                     /locus_tag="VE783_09225"
                     /inference="COORDINATES: protein motif:HMM:NF014794.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-binding protein"
                     /protein_id="HYX53623.1"
                     /translation="MSALQHTTPAHAISGAQAVVESLLRNGIDCGFGIPSIHNIPIYE
                     ALRHAAPFHHWVVRHEQAAGYAADGFYRQSGRIAVVFASTGPGNLFTLVPLLESLQSD
                     TAVMVIGTNIASHLHAGQGGALHETPDQLEIIRPLTRYARRVASAAEIPAVIAEAVSM
                     LRGSCPGPAFIEIPHDLLAATFTSETASPRQMQESAPGDLAMAIHQVQRARRPVLLIG
                     GAAKGSPSAVKDFAEMLQGPVFTTTSGKGNFPGDHPLFMGCISRLGLVQEVLNQSDLL
                     VSLGARFTEFDTGRFQLRLPEEHIQVVPHIDYPGTRVHASLRIVANPVEAASVFSSSI
                     ERRTPWCDITAQLATEKRRLEALGADAWKALTLLRRALGAHDILVNDQSILNYWASAF
                     YPVYEPHTFLYPYGSGTLGYGLPAALGAACAARRSGNTHKIVCVSGDGGFQYTLHELA
                     TLAQYELPVKILLVNDEAYGIIGFLQRTAFGQTHEVALKNPDFCRLAESYGIRAERAT
                     TFAELEQKCSGWLNHPGPALLEWRTVLKSPWESGAIPRPTGIAMKENR"
     gene            complement(4597..>4899)
                     /locus_tag="VE783_09230"
     CDS             complement(4597..>4899)
                     /locus_tag="VE783_09230"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53624.1"
                     /translation="NTGLGPNFSSFDLRLSRSIKMGERGDLQLIAEGFNIFNRLNYAS
                     VNNIVGPSLGLPTTIGGQGFTTFNVKGSAQPFISNPLAFTSAYPARQLQLGLRANF"
BASE COUNT         1061 a         1415 c         1381 g         1042 t
ORIGIN      
        1 tgctggtcgg tcattttgtg cacgacgccg tcccatgtgt aaccggcatt attcacgatc
       61 acatcgagcg cctgaaactt attgagtgtc gcctgcacca gattgtcagg aaacttcggg
      121 tcggtaacgt caccgggaaa tgggtgcacc tgcccaccgt tcttcgaaat cgctgccgcg
      181 gcttctttta gcgggtcggg gtcaatatcc gacatcacga ccttggcgcc gtgctgggca
      241 aacagttctg cggtagcctg cccgatgccg cgggctgctc cggttacgat cgctactttg
      301 ccttcaagaa ggttagccat tgatcaatcc tctgcacgca aattttcacc acggatgcgc
      361 ggagaccagg aaaaactccg gctctggcca attgctatct gctaattgct ggttttcgtc
      421 gccatctccg gccggatgct ctcagttccg gaccagtact tcttccgcag ctctttcttg
      481 agaatctttc ctgttcccgt cttcgggagc gtatccatga attcgatgga gcgcggacat
      541 ttgtaatgcg aaagccgcga acgggtgaaa tcgagaatct cctgctccgt ggcctgaacg
      601 ccgggcttga gtgcgaccag agctttgggg atttcgcccc aacgcggatc aggaactggg
      661 atcaccgcaa cttcgtaaat cgcaggatga gcgagcatgg ctttttccac ttccagcgat
      721 gatatattct cgccgccgct gacgataata tccttcttgc gatcgacaat caggatgtaa
      781 ccgttctcat ccatcgtggc catgtcgccg gtatggaacc agccgccacg catgacttcg
      841 gccgttgctt ccggctgctt ccagtaaccg tccatgacgc cgtcgctgcg cgcgatgatc
      901 tcgccgatac tctggccgtc atgaggaacg tcacgatctt cagagtcgac gatgcgaatt
      961 tccactccgg gcaaggcgta accggtgcgg gcctgccctt caaaacgctc gtcgccttcc
     1021 cagttcacgc ccagcttctt ctgggccgtg gtgagcacgg ggctggtctc tgtgagtcca
     1081 tagccggaga agcagatgca tccaatgcgg tcttccacct gacgaaccag cgttggcgat
     1141 gccgcggctc ctccgagcgt gatccgcctc aagctgctga ggtcatattt cgggcgatca
     1201 ggacagtgca caagagcagt cgccatggtt ggcaccagac tgcaggcgtg gaccttttcc
     1261 ctttcgatca gcctgaatac ctcgggcgga tcgaatttgc cgatcatgac atgcgtgcca
     1321 cctacatatg tgagggagtg cgcaacaccc cagccgttcg cgtggaacaa aggaatggtg
     1381 tgcagttcaa cggaatctgc accggtgttg aacgtgattg tcacgttgag agcatgcaga
     1441 tatatgttgc ggtgcgtgag catcacgccc ttaggattcg cgctggtgcc gctggtataa
     1501 aaaagctctg ccagcgagtt ctcgtccacc ttcgttatct ccagctgctg cgggctggcc
     1561 gaactcagca gttgctcgta attctgcgaa aatgcccaac tggctggagt gtggtccagc
     1621 gcaacataac cttccacggt cttgagttcg gcccggaatc catccaccat cggggcgaac
     1681 tgctcctgga ataaaaggac cttggcgccg gaatcattca gaatgtaagc cagctcgtgc
     1741 ggcgtcaaac ggatgttcaa gggcagcagg actgcgcctg cttcaagcac gccgtagtag
     1801 ccctccagga ggcgatggca gttcccgctg aggaacgcca cgcggtctcc tggttgaact
     1861 cccaaagcgc gtaaagcgcc gccgagccgg gcagcacgtt ctgcgaattg agaataggtg
     1921 tagcgctgct caccgcagat cacgccaact ttcctgggat actgctgact ggcatagcgc
     1981 aggaagcgga gcggagtaag aggaatgttc atgaacgatg cagcctcagg ctgattgccc
     2041 tccatctacg gccagtacgt ggccggtaac atagtcagac gccgcggacg ccaaaaatac
     2101 cgccgcgcct ttcaagtcat agtcggtgcc gaagcggcgc aacgggatgt gcgacagcaa
     2161 agtttctttc ttgttctcga tcacccaacc ggacatgtga gtcgggaacc accccggggc
     2221 cagcgcattc acctgaatat tgtgttgcgc ccacttccag gcaagatcct tggtgaaggc
     2281 gatgacgccg cctttgctgg catggtagcc caccgcgtcc actacgcccg gaggcgagcc
     2341 gcgcagcccg gcaatggatg acacgttgat aatcttgcct ctctcctgcg gcaccatgat
     2401 ctttccggca gcctggcagc ataggaaagt tccggtgaga ttagtttcca ggactttgtt
     2461 ccagtcttcc agcttcattt gctcgattgg tgctccccag gaaatgccgg cattattgat
     2521 gagaatgtcc actcgtttga actgcgagac cgcatcgtgg aacaacttgc tcacgctatc
     2581 gggacttttg acatcgcatg caaaggcggc cgttcgaatg cccaacttgg ccaattcatg
     2641 cgcagtctcc tcgcagcgtt ccttcttgcg agcgcacaga accacgtgcg cacccatttc
     2701 tgccagacct tccgccatct gctttcccag gcctatggag ccgccagtga tgaccgcgac
     2761 acggccggag agatcgaaca gttcccttac gttccgattg agtggtatgg acataagctg
     2821 ggggtcagcg attctccttc attgcgatac ctgtcggccg cggaatggcg ccggattccc
     2881 atggagactt aagcacagtc cgccactcca gtaatgcggg accagggtga ttgagccagc
     2941 cggaacattt ctgttccagt tctgcaaacg tggtggcgcg ctcggcgcga atcccatagc
     3001 tctcagccag gcggcagaag tcagggttct tcaacgcaac ttcgtgcgtc tggccaaaag
     3061 ctgtgcgctg gagaaaaccg atgatgccat acgcttcgtc attaacgagc aggatcttca
     3121 ccgggagctc atactgtgcg agtgttgcaa gctcgtggag cgtgtactga aaaccgccat
     3181 caccggacac gcaaacgatc ttgtgcgtgt taccggatcg ccgcgccgca cacgccgccc
     3241 caagtgcggc tgggagacca tagccaagag ttcccgagcc gtaaggataa agaaacgtgt
     3301 gtggctcata cactggatag aaagcagagg cccagtaatt cagaattgat tgatcgttta
     3361 ccagaatgtc atgcgcgccg agcgctcggc gaagcaaagt gagcgctttc catgcatcgg
     3421 cgccaagcgc ctcaagccgc cgcttctcag tggccaattg agcagtgata tcgcaccacg
     3481 gcgttcgacg ctcaatggaa gaagagaaca cactcgccgc ctccaccgga ttggccacga
     3541 ttcgcagcga agcgtgtacg cgcgtgccgg gatagtcaat gtgcgggacc acctgaatgt
     3601 gctcttcagg aagcctcaat tggaaacggc cggtatcaaa ctcggtgaac cgagcgccca
     3661 gcgagaccag cagatcgctt tggttcagta cttcctgcac caggccaagt cgcgaaatgc
     3721 agcccatgaa cagcggatga tcaccgggaa agtttccctt accgctggtg gtggtgaaca
     3781 ccggtccctg cagcatttcg gcgaaatctt tgacggcact gggactgccc ttggcggcgc
     3841 cgccaatcag caaaaccggt cgtcgtgccc tttgcacctg atggatcgcc atggccaggt
     3901 ctcccggggc agattcttgc atctgtcgcg gggatgcggt ttcggaagtg aacgtagctg
     3961 ccagcaggtc atgcgggatt tcaatgaacg caggacctgg gcacgatcca cgcaacatgc
     4021 tcactgcctc tgcgatcaca gcaggaattt cggcagcgct cgcgacgcgc cgcgcatatc
     4081 gcgtcagcgg acggatgatt tctaattgat caggcgtctc atgcagcgca ccgccctgtc
     4141 cggcatggag atgggatgca atgttggttc ctatcaccat gacagctgta tctgactgca
     4201 aactctcgag cagcggaaca agtgtgaaga gattacccgg cccggtagag gcgaagacca
     4261 ccgcaattcg gccgctctgg cgatagaacc cgtccgccgc gtacccggcc gcctgctcat
     4321 gacgaaccac ccaatgatgg aacggggcgg catggcgcaa agcttcatag atgggaatat
     4381 tgtggatgct gggaatacca aaaccgcagt cgatcccatt gcgcaacaga gattccacca
     4441 cggcctgagc gccgctgatg gcatgggctg gagtggtgtg ttgaagggca gacatcagga
     4501 tgaatggcgg ttcagttttc tcgcgcacgc cattgtagcg caaaaagaaa aaaggcgacg
     4561 gccacgaaag ccgtcgccct tgggttgaag tagaagttag aagttagcgc gcaatccgag
     4621 ctgcaactgg cgcgccggat aagcggatgt gaaggccagc gggttactga tgaaaggttg
     4681 cgctgatccc ttcacattga acgtggtgaa gccttgacca ccgatcgtag ttggcagccc
     4741 aagactcggt ccaacgatat tgtttacgct cgcatagttc aggcggttga aaatgttgaa
     4801 tccttccgca atcagttgaa gatcgccacg ctcgcccatc ttgatggacc ggctcagccg
     4861 caggtcaaac gaactgaaat tcggacccaa ccccgtgtt
//
LOCUS       DASQYP010000286         7851 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_188193, whole genome shotgun sequence.
ACCESSION   DASQYP010000286 DASQYP010000000
VERSION     DASQYP010000286.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 7851)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7851)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7851
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_188193"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(139..2115)
                     /locus_tag="VE783_09235"
     CDS             complement(139..2115)
                     /locus_tag="VE783_09235"
                     /inference="COORDINATES: protein motif:HMM:NF025010.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptidyl-prolyl cis-trans isomerase"
                     /protein_id="HYX53625.1"
                     /translation="MIRFLQSGGKLPKYLLSGFLLVICLGMVVYLIPGFMSGNSITQS
                     GVVASVAGEEIKREEVSKYVQAQIRQQARGQALSPELMTMYASFLTPRVVQQLVQRAE
                     IDYEARRIGLRVSDDELRDELRNGPYKATLFPGGNWIGQDKYEELLRESNMTVPEFEA
                     SERRDMLMRKLFSTIGASATVTPAEVEHAYVDRNTKVKFQYATVSLDDLQKQIKPTDA
                     EVKAFYDTYKTRYENSIPEKRTVRYFVVNDKDIQGKVKVDDADIQSYYDKNRDQFRTP
                     EQVRARHILIKTPAVGADGKIDQKGVDAARAKAQDILKQVKAGGNFAELAKKYSEDPG
                     SAQNGGELPPFGKGQMVPEFEKAAFAQNPGQISDLVQTSYGFHIIQTEAKTPAGVKPL
                     SEVKSQIEQQLRADKASTELNKISTQAPADAQKDGLDKAAAKYGAQVVQSNPIARTDT
                     LAGVGPAPQVMNTIFSAQPNAIQADRGPQGLVVFDVTKVEPPRTPPLEEIKDRVTNEF
                     KAEKAQELMRKKVQELADRAHATHDLAKAAKEVGATVKTSDLVGRSAQVPDFGSMSGP
                     GSVAFTLKQGEISGPLTLGAKAGVLEVEERQEPATNGPDYAKARDQLIEELTNQKRQE
                     ALDLFMNDLGKRMEKEGKVVINKSEMDNLTKTRT"
     gene            2268..3266
                     /locus_tag="VE783_09240"
     CDS             2268..3266
                     /locus_tag="VE783_09240"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF014566.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0071586 - CAAX-box protein processing
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CPBP family intramembrane glutamic
                     endopeptidase"
                     /protein_id="HYX53626.1"
                     /translation="MLQTLNKRRLGLAVLFYCAALIAFWAIARSFHLAALRDFPVSTT
                     LSFAALFAPYWFFGFGAAEAIQKLFPGTAAKVLLSGLVAMPYPMLSLARHNFHWQMLA
                     MLLLICLGVSALLACFQQPGTWADFVALAIVGLLIDLGLLSTSWPFGPPGAVMWPAGL
                     GGFPKMMMANLALYGYLVIKPLDGVGYDLIPKWADFRNGLREFLYYAPIVLVLGFALH
                     FITWHGSQAHVEQFPAAWIFTFFFVALPEELYFRGLIQNLLERRIGQTGALLLASVLF
                     GLSHFNKRAVFNWRYVILATIAGAFYGRAWRKQRRLFASSVTHSTVDAVWSIWFRM"
     gene            3690..5096
                     /locus_tag="VE783_09245"
     CDS             3690..5096
                     /locus_tag="VE783_09245"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53627.1"
                     /translation="MALLLAGCGGSGSRPTPQGGFTVSSLNGSYAFSFSGNDAAGFFA
                     AAGTMALDGAGHITSGILDLNRGTGVAPNIALTGSYSIKADGRGTAILNTATAGNMNL
                     VFVVISSQHALVSRFENVATGSGSMDLSNSGAFTTTALAGSFAFNWSGLDGPGNPEAT
                     AGSITLDNTGTLTTGVQDIVDGTLPLTNQPIGAGTLSITTSGRGTLALTTSIGSLTFA
                     IYPVSTNFFKAVEIDNIAQLAGDVFRQQGPSNNTALNGPFAFTIAGSDEAALAPLAVG
                     GVFTSSGTGAITTGTEDQNDGGSPSTNVPISGNYAIAGLRGTLTFTGTNFAQNFVFYP
                     TTGGIQLLEIDSGVVLSGVAFQQSGAFSNASIQGAYGLNLSGLTPGGELDENASLNAN
                     GNGGYSGILDANNVFTPTPGIALTGAYTVDATGRGPMTLNSAIAGQNLAVYVVNGTQA
                     LFIDLDSGLVAAGQMQHQ"
     gene            complement(5186..5482)
                     /locus_tag="VE783_09250"
     CDS             complement(5186..5482)
                     /locus_tag="VE783_09250"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53628.1"
                     /translation="MNRLRILMIGAALVAGSSMIASAEPRDEHRGSAYTEHDRDDRYS
                     ARYYGDRDDYRRYDRDDRGRYDNDRDDRFRHERDERNERWQNRFRDRDHDGDRR"
     gene            complement(5655..6101)
                     /locus_tag="VE783_09255"
     CDS             complement(5655..6101)
                     /locus_tag="VE783_09255"
                     /inference="COORDINATES: protein motif:HMM:NF012417.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quercetin 2,3-dioxygenase"
                     /protein_id="HYX53629.1"
                     /translation="MKAQLHSNALVSFAGEGEQLRLLGDNQTVKLAGSQTGGAFTLIE
                     QNNPPGVAIPPHFHTQEDETFYVLEGEMEFTLGEKKIRATAGTTVFLPRGVTHSFKVM
                     ETARALVMTLPSGIENMFRELDALPAEPADVSQVVSICKRYGVHFV"
     gene            complement(6306..7046)
                     /locus_tag="VE783_09260"
     CDS             complement(6306..7046)
                     /locus_tag="VE783_09260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016293339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HYX53630.1"
                     /translation="MATQIADASQGSMSAPPQNCIICTEDLWKTYLMGTEEVHALRGV
                     NLRINRGEYVAIMGPSGSGKSTLMNLIGCLDTPTKGRYWLNSNLVSELDDDELARIRN
                     KEIGFVFQTFNLLARATALHNVELPLIYSGTPSDERIERAKTALDAVNLSERMNHKPN
                     ELSGGQRQRVAIARALVNNPSIILADEPTGNLDSQTGQEIMELFAELHRKGNTIVLVT
                     HEPDIAEHAHRVIHIRDGVIASDERKAR"
     gene            complement(7117..>7851)
                     /locus_tag="VE783_09265"
     CDS             complement(7117..>7851)
                     /locus_tag="VE783_09265"
                     /inference="COORDINATES: protein motif:HMM:NF024829.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HYX53631.1"
                     /translation="YDAPFDGVVTSLPVHEGETVVMGIQNAPGSTLMTVADMGVITAE
                     VRVDETDIINVKIGQSADVTIDAMPGQTFKGKVTEIGDNAIVRSTGVSTSQSTTSTQE
                     AKDFKVVVTLDNPPANLRPGLSATAKITTGSEHDALTIPIQALTVRDKSDLEAKDSKK
                     KAAAQPVAAKKENQELQGVFVVTPAKKAEFRQVETGLTGASEIQIKSGLKENDEIITG
                     SYKVLKTLRNGSGVKVDNRQMNKAES"
BASE COUNT         1489 a         2224 c         2247 g         1891 t
ORIGIN      
        1 ggcgagcgcg ttcgaggaaa tccacgaagg cataggcttc cggaccaagg tcgcctatgc
       61 ccccgcgaga aggtaaagat gtgggatgaa gcagtattcc ggcggagcgt tcaaacatga
      121 cttcacattg gatgcagctt aggttcgcgt tttagtgagg ttgtccatct ccgacttgtt
      181 gatcacgacc ttgccttcct tctccatgcg ttttccaagg tcgttcataa agaggtccag
      241 cgcttcctgg cgcttctgat tggtaagctc ttcgatgagc tggtcgcgcg ccttggcata
      301 atccgggccg ttggttgcag gctcctggcg ctcctcaact tccaacacac cagcctttgc
      361 cccgagcgtg agcgggccgc tgatctcgcc ctgcttgagc gtgaacgcca cgcttccggg
      421 accgctcatg gagccgaagt ccggtacctg ggcactgcga ccgaccaggt cgctggtttt
      481 gaccgtggca cccacttcct ttgctgcctt ggccagatcg tgcgtggcat gagcgcggtc
      541 cgcgagttcc tggaccttct tgcgcataag ttcctgcgct ttttcagcct tgaactcgtt
      601 ggtcacgcgg tccttgatct cttccagtgg tggcgtccgg ggcggctcga cttttgtgac
      661 atcgaagacc accaacccct ggggaccccg atcagcctga atcgcattgg gctgagcgga
      721 gaagattgtg ttcatcacct gcggcgcagg tcccacgccc gcgagcgtgt cagtcctcgc
      781 gatcgggttg ctctggacaa cttgtgcgcc atatttggca gcagctttgt ccaatccgtc
      841 cttttgggca tcggcagggg cctgggtaga aatcttgttc agctcagtgc tggccttgtc
      901 tgccctcaac tgctgctcaa tctgtgattt cacttcggaa agcggcttca cccccgcagg
      961 agtttttgct tccgtctgaa tgatgtggaa accatacgag gtctgcacca ggtcactgat
     1021 ctgtcccggg ttctgggcaa atgcagcctt ctcgaattca gggaccatct gccccttacc
     1081 aaagggaggc agttcgccgc cgttctgtgc gcttccgggg tcttcagaat attttttggc
     1141 aagttcggca aagttcccgc cggccttcac ctgcttgaga atgtcctgcg ctttggcgcg
     1201 agcagcatcc acgccctttt gatcgatctt tccatcggct cccacggcgg gtgtcttgat
     1261 caggatatgg cgcgcccgca cctgctccgg cgtacgaaac tgatcccgat tcttgtcgta
     1321 gtagctctgg atgtccgcat cgtccacctt gaccttgccc tgaatatcct tgtcattcac
     1381 gacgaaatac cggacggtgc gcttctctgg aatggagttc tcgtagcgtg tcttgtaggt
     1441 gtcgtagaac gccttcactt ccgcgtcagt gggcttgatc tgcttctgca ggtcatcgag
     1501 gctgacggtt gcgtactgga actttacctt ggtgttgcga tctacgtagg catgctcaac
     1561 ttcggccggg gtgactgtcg cgctggcccc gatagtgctg aacagcttgc gcatgagcat
     1621 gtcacgccgc tcggaagctt caaattccgg cacggtcatg ttcgattccc gcagcagctc
     1681 ttcgtatttg tcctggccga tccagttgcc gccgggaaaa agagtggctt tgtagggacc
     1741 gttccgcagt tcgtcgcgaa gctcatcatc ggaaacgcgc aagcctatgc ggcgagcttc
     1801 gtagtcgatc tctgcgcgct ggaccagctg ctgcacgacc cggggcgtca ggaaagaggc
     1861 gtacatcgtc atcaattccg ggctgagcgc ctgacctctg gcctgctggc ggatctgcgc
     1921 ctggacgtat ttgctcactt cctcgcgctt gatctcttca ccggccaccg atgccaccac
     1981 gcccgactgg gtgatggagt tacccgacat gaagccggga atgagataga ccaccatgcc
     2041 aaggcagatg accagcagga agccgctgag cagatattta ggcagtttgc cgccactttg
     2101 cagaaaacga atcatgtctg ggaatactcc agggaaatat ggggactctg ctgattatat
     2161 aaaaagatca gccaattcgc ggcccggacg accgctatga ggcatacgcc ttaagggttc
     2221 ttccattgcg gtgaggggcg caatggcagg tgatatcctg cgaccgcgtg cttcagacgc
     2281 ttaacaaacg ccggcttggc cttgcagtgc tgttttactg tgcggccctg attgcttttt
     2341 gggcaatcgc gcggtctttt catttggccg cgctgcgcga tttccctgtc tcgacgacgc
     2401 tcagcttcgc cgccctcttt gccccttact ggttttttgg attcggggcc gctgaggcaa
     2461 tacagaagct gtttccgggc acggcagcca aagttctcct ctccggcctg gtggcaatgc
     2521 cctatcccat gctctcactg gcgcgccaca attttcactg gcagatgctg gctatgctgc
     2581 tcttgatctg cctgggcgtt tcagccctgc tcgcgtgttt tcagcagcca gggacgtggg
     2641 ctgacttcgt cgcgcttgcg atcgtaggtc ttttgatcga tctgggactg ttgagcacgt
     2701 cttggccgtt tggccctccg ggagccgtga tgtggccggc cgggctgggc ggcttcccga
     2761 aaatgatgat ggctaatctg gctttgtacg gctacttggt catcaagccg ctcgatgggg
     2821 ttggatatga cctgattcca aaatgggcag acttccgaaa cggcctgcgg gaatttctct
     2881 actacgcgcc aattgttctg gtgcttgggt tcgcgctgca cttcatcacc tggcatggga
     2941 gtcaggcgca tgtggagcag ttcccagcgg catggatctt caccttcttc tttgttgcgc
     3001 ttccggagga actgtatttc cgcggactga ttcagaacct gctggagcgc aggataggac
     3061 agacaggagc gctgctgctg gcttcagtgc tgtttggcct ctcacatttc aacaaacgcg
     3121 ccgttttcaa ctggcgatac gtgattctgg cgaccatcgc cggcgctttc tatggacgcg
     3181 cctggcgcaa acagcgacgt ttgttcgcat cctcggtgac acattccaca gtggacgcgg
     3241 tctggtccat ctggttccgg atgtgacctt caagtaaaca aatctttact tcaccccaac
     3301 tttttttcgc gaccatgccg tggctgcagg gttgatgatg gtcacaatat ccattgaatt
     3361 tgcccgactc gaggccactt ggcccgcagc aggccaattt ggagccagct tttgaatgcg
     3421 cgaaaataac aacagcacat tctctcagca ttggctcgaa tcgtacggcg cttcgctggg
     3481 aaggccgtca acggagtgag tccgcgcagg tggacagctc ggatatgcag atttaccaaa
     3541 cgtgcatatc cgtttcgcga cgcttagcgc gggtatggca ccccgggttt gagcgggaaa
     3601 atgggacacg ctagcacgac ttcaagaaat caggtgacgc aatgccggta agcagaatct
     3661 ctcgtttgtt ttttctcttt acagcgcctt tggctctcct cctggcaggc tgcggtggtt
     3721 ccgggagccg tcccactccg cagggtggct tcacggtgag cagtttaaac ggaagctacg
     3781 cattctcttt ttccggtaat gatgcagcgg gctttttcgc cgccgccgga acaatggcgc
     3841 tggatggggc gggccacatc acctcaggta ttctcgatct aaatcgtggc accggcgtgg
     3901 caccgaacat tgctcttaca ggcagctaca gcatcaaggc tgacgggcgc gggaccgcca
     3961 ttctcaacac cgccacggcg ggcaacatga accttgtgtt cgtggtgatc tcgagccagc
     4021 acgctcttgt ttccaggttt gaaaacgtag ccaccggaag cggatccatg gacctctcaa
     4081 attccggagc gttcacaaca accgcattgg ccggttcctt cgcgtttaac tggtctggtc
     4141 tggatggccc tgggaatccg gaggcaaccg ccggttccat tacgctggac aacactggaa
     4201 cgctcacgac tggcgtgcag gatattgtcg acggcactct tccgctcacg aaccagccaa
     4261 tcggcgccgg aacactgagc atcaccacta gcggtcgcgg gaccctggct ctgaccacca
     4321 gcatcggctc tcttaccttc gccatttatc cagtgagcac gaattttttc aaagcagtgg
     4381 aaatcgacaa catcgcgcaa ttagcgggtg acgtcttccg ccagcagggt ccgtccaaca
     4441 acacggcgct gaatgggcca ttcgccttca cgattgcagg ctctgacgag gctgcgctgg
     4501 cgccgcttgc cgtaggtggg gtgttcacat ccagcggcac aggagcgatt actacgggca
     4561 ccgaagatca gaacgacggc gggtcgccct ccacgaatgt gcctatatcc ggcaactatg
     4621 ccattgcggg gctgcgcgga accttgacct ttaccggcac gaatttcgcc caaaactttg
     4681 tgttttatcc gactaccggt ggcattcagt tgctggagat tgactccggc gtggtgctga
     4741 gcggtgtggc cttccagcaa tcgggcgcct tctccaatgc gagtattcaa ggtgcttacg
     4801 ggctgaacct ctcaggactc acgccgggcg gagaacttga cgagaacgcc tcactcaacg
     4861 ccaacgggaa cggcggctac agcggcatcc tggatgcgaa caacgttttc acgccaactc
     4921 cgggtatagc cctgaccggc gcgtacacgg ttgatgctac cggtcgtggc cccatgacgc
     4981 tcaacagtgc tattgccggg cagaatcttg cagtttatgt ggtaaacggc acgcaggcgc
     5041 tctttattga cctggattcg ggcctggtgg cagcgggaca gatgcagcac caataaaacg
     5101 ggcagcaact ttcaaaacta aaaaacgtta aggccggatc agcgaatgca gtccggcctt
     5161 ttctgttgat ctgaactgca gggttctagc ggcggtcgcc gtcatggtcg cgatcgcgga
     5221 agcggttttg ccagcgctca tttctttcat cgcgctcatg ccggaagcgg tcgtctctgt
     5281 cattgtcgta gcggccccga tcatcgcgat cgtaccggcg atagtcatcg cggtcgccgt
     5341 aatatcttgc ggagtatcga tcatcgcgat catgctctgt gtacgcggaa ccgcgatgct
     5401 cgtcgcgggg ctcggccgag gcaatcatgg aacttccagc caccagtgct gctccgatca
     5461 tcagtattct taaacgattc atggctttcc tccctttgga agagaaaacc cttccgggtt
     5521 ccgggagtcg tggacaggcc aatttagatt tgcaaagagt ccttgaggaa aattgccggg
     5581 agttgggtga ggttaagacg cggcagcctg ctccaagcag gccgccgcgc cttgctaaag
     5641 gaacctgggg cgcgctacac gaaatgaaca ccataacgct tgcagataga aactacctgc
     5701 gatacatccg ccggttcggc gggaagagca tcgagttcgc ggaacatatt ttcaatgccc
     5761 gagggaagtg tcatgacgag cgcacgcgcc gtttccataa ctttgaaaga atgggtaacg
     5821 ccgcggggga ggaataccgt ggtgccggcg gtggcgcgga tttttttctc gccgagagtg
     5881 aactccatct cgccttccag aacatagaaa gtttcgtctt cctgggtatg aaaatgaggc
     5941 gggatagcaa ctcctggagg attgttctgt tcgatcaacg taaaggcgcc gccggtctgc
     6001 gagccggcga gtttgacggt ctggttatct ccaagcagac gtagctgctc gccttctccc
     6061 gcaaacgaga cgagggcgtt cgagtgaagc tgggctttca ttcgctctcc ttcaatgagt
     6121 tttgctgagt ggcagcggaa acaactacga agcccaggcg gggaactacg tgtgctgctg
     6181 actgccgaga ccgcgcgaac aggcacaaca aatcgtgcag gtcagtgcgg ctttcgttct
     6241 ttgcgattga gacgaagttc gggcgcgaac gtaatgttgt accagaaaaa cttaaccggc
     6301 gcgaactacc tggccttgcg ttcgtcgctg gcaatcacac cgtcgcggat gtgaatcacg
     6361 cgatgcgcgt gctcggcgat gtccggctcg tgagtgacca gcacgatggt atttcccttg
     6421 cgatggagct cggcgaaaag ctccatgatc tcctggccgg tctgcgagtc caagtttccc
     6481 gtgggttcat cggccaggat gattgacggg ttatttacca gcgcacgcgc aatggccacg
     6541 cgctgccgct ggccaccgga gagctcgttc ggcttgtggt tcatgcgctc ggagagattg
     6601 accgcgtcga gcgcggtttt agcgcgttca atgcgctcat cagaaggcgt gccactgtaa
     6661 atcaagggca gttcaacgtt gtgcagcgcg gtagcgcgcg ccagaagatt gaaggtctgg
     6721 aaaacgaagc caatctcctt gttgcggatg cgagccaact catcgtcatc gagttcgctc
     6781 acgagattgc tgttgagcca gtaacggccc tttgtcggcg tatcgaggca gccaatcagg
     6841 ttcatgagag tggattttcc ggaaccggag ggacccatga tggcaacgta ctctccccgg
     6901 ttgatccgca ggttgactcc gcgaagcgca tggacttctt ccgtgcccat caggtaggtc
     6961 ttccagagat cttccgtgca gatgatgcag ttctgcggag gtgcactcat gctgccttgc
     7021 gaggcatccg cgatctgtgt ggccatgctc ttctcctgcc gggctgcttg ggttcgctct
     7081 ttctatttta gatgctcaga cgatctctct tcagcattaa gactcagcct tgttcatctg
     7141 ccggttatcc actttcacac ctgagccgtt gcggagcgtc ttcaggacct tgtagctgcc
     7201 ggtaatgatt tcgtcgttct ccttcaggcc actcttgatc tggatttcgc tggctccggt
     7261 caggccggtt tccacctggc gaaactccgc ctttttggct ggagtcacta cgaacactcc
     7321 ctgcagctcc tggttttctt ttttcgcggc gacgggctga gccgcagcct ttttcttgct
     7381 gtctttcgct tccagatcag atttatcgcg gacggtgagc gcctgaatgg gtatggtcaa
     7441 ggcgtcatgc tcagatccgg tggtgatctt cgcggtggcg gagagccccg gacggaggtt
     7501 cgccggcgga ttatccagcg tgaccactac tttaaaatcc ttggcttcct gcgtactggt
     7561 ggtgctttgg gaagtagaaa cgccggtgga acgcacgatg gcgttatcac cgatttccgt
     7621 gactttgccc ttgaaggtct ggccaggcat ggcgtcgatg gtcacatcgg cgctctggcc
     7681 gattttcacg ttgataatgt cggtttcgtc cacccggact tctgcggtga ttactcccat
     7741 gtcagctacg gtcatcagag tgcttccggg agcgttctgg atacccatca ccacggtctc
     7801 gccttcatgt acaggaaggc tggttaccac gccatcaaaa ggagcgtcgt a
//
LOCUS       DASQYP010000287         3711 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_11736, whole genome shotgun sequence.
ACCESSION   DASQYP010000287 DASQYP010000000
VERSION     DASQYP010000287.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 3711)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3711)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3711
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_11736"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..706)
                     /locus_tag="VE783_09270"
     CDS             complement(<1..706)
                     /locus_tag="VE783_09270"
                     /inference="COORDINATES: protein motif:HMM:NF019845.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alcohol dehydrogenase catalytic
                     domain-containing protein"
                     /protein_id="HYX53632.1"
                     /translation="MKAVCWMGTEKMSVENVPDPKILNPRDAIVRITRTAICGSDLHL
                     YNGFMPTMEHGDILGHEFMGEVVEVGPGVKPEKLKVGDKVVVPFTIACGNCFFCKQQL
                     WSCCDNSNPNYWMAEQLMGYSPSGLFGYTHMLGGYAGGQAQYARVPFADVGPLKVPAG
                     IPDDKVLFLSDIFPTGWMGAENANIRPGDTVAVFGCGPVGQFAIRSAFLMGAERVIAI
                     DRFPYRLRMAEQAGAES"
     gene            complement(703..1482)
                     /locus_tag="VE783_09275"
     CDS             complement(703..1482)
                     /locus_tag="VE783_09275"
                     /inference="COORDINATES: protein motif:HMM:NF022072.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SRPBCC family protein"
                     /protein_id="HYX53633.1"
                     /translation="MNQTASIHAGNAIPARQSSSSAVSRWTAIIGGSALAVLGLTRRS
                     KPGMAIAAAGGALAYFGSRAASNPKEMVARSSIQLNCSPEEAFQFWRHFENLPRFMRH
                     LESVSITGERRSRWTAIGPLGKRLRWDAEIVAERPGELISWRSLEGSDLMLDGFVEFQ
                     AAPGDRGTTVFATIIYTPPGGQLGRAAAKMLGKDPSFLMRQDLRRFKALLETGEIPTT
                     EGQTHGPRTRVTAAARLLDPDQPFPRNAKVSDALEAQRRIS"
     gene            1715..2002
                     /locus_tag="VE783_09280"
     CDS             1715..2002
                     /locus_tag="VE783_09280"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53634.1"
                     /translation="MEKKDPTGSEFGIMLRNAFRPGDAVPRSGAYWVNHYQHRVAHLA
                     GLKAGEQFPECRKCGARVRFEEELSDRQAPDASSDPDFSNTDAAQDKKSAN"
     gene            complement(2030..2380)
                     /locus_tag="VE783_09285"
     CDS             complement(2030..2380)
                     /locus_tag="VE783_09285"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53635.1"
                     /translation="MFKQEFLATIKSPEHRLAWLVAIIADALQLLAFPVFMEGGASPF
                     DDALDLLVAAILIRTLGWHWAFLPTLMAEVVPGLDLFPTWTAAVFFVTRKQVPSESKE
                     PEILPPDRAAPSRY"
     gene            complement(2580..>3711)
                     /locus_tag="VE783_09290"
     CDS             complement(2580..>3711)
                     /locus_tag="VE783_09290"
                     /inference="COORDINATES: protein motif:HMM:NF038114.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="MBG domain-containing protein"
                     /protein_id="HYX53636.1"
                     /translation="VPINGFAIDPVNSNVIYAGSDIGVFISTNGGASWNPFGSGLPRV
                     AVFDMSFQNANRILKIATHGRGAWEIQAAKTVATVTLNVPATATYGDNVTFTATVGAN
                     GALATPGGTVTFSDGGLVLGTSTLDSTTFTATFSTNQLSAGTHSITATFSGDRIFDVS
                     PSAASTLTINLAALTITANDATKILNAPNPSFTASYSGFVLGQGPSALNGVLICTTTA
                     LANSFVGSYPITCSGQTSTNYAITYVPGTLHIIFLPGGIVDGEASHVVLSPLGDGSSV
                     FKAGRTVPVKFRVGDVNNISIGTPGTVTSFLLTSVITGTVSTPVDILPTSTTPDTTFR
                     FDPTAQQWIFNLNTSGLAPGSTYVFTIGLADGSSINFQFGLR"
BASE COUNT          804 a          991 c         1191 g          725 t
ORIGIN      
        1 cgctctccgc gccggcctgt tccgccatgc gcaggcgata agggaagcga tcaatggcga
       61 ttacccgctc cgcccccatc aggaaggcgc tgcggatcgc gaactgccca acggggccgc
      121 agccgaagac cgccacagtg tcaccgggac ggatgttggc gttttctgcc cccatccatc
      181 cggtgggaaa gatgtcactc aggaacagaa ccttgtcgtc gggaattccc gccggaacct
      241 tcagcggtcc aacatctgca aatgggacac gcgcatactg tgcctggccg ccggcatagc
      301 cgccgagcat gtgtgtatac ccaaagaggc cggaaggcga gtaacccatg agctgctcgg
      361 ccatccagta gttgggattg gagttgtcac agcaggacca gagttgctgt ttgcagaaga
      421 agcaattgcc gcatgcgatg gtgaagggca ctaccacctt gtcgccgact ttgagctttt
      481 caggcttgac gcccggcccc acttccacca cttcacccat gaattcgtgg cccagaatgt
      541 cgccatgctc catcgtgggc atgaagccgt tgtagagatg gaggtcagag ccgcagatgg
      601 cggtgcgggt gatacgcacg atggcgtcac gcggattcag gattttcgga tcaggcacat
      661 tctccacgct cattttttcc gtgcccatcc agcagactgc cttcatgaaa tcctcctttg
      721 cgcttctaat gcatcgctca ccttcgcgtt ccgtggaaag ggttgatcgg gatcaagcag
      781 ccgcgccgca gccgtcacgc gggtacgcgg cccatgcgtc tggccttccg tggtcggaat
      841 ttcgccggtt tcgagcaacg ctttgaaacg gcgaagatcc tgccgcatga ggaagctggg
      901 atccttgccc agcatttttg ccgccgcacg gccaagctgt ccgcccggag gcgtgtaaat
      961 gatggtggcg aacacggtgg ttccccggtc gccgggagcg gcctggaatt ccacgaagcc
     1021 gtccagcatg aggtcagagc cctccagcga acgccaagag atcaactcgc caggacgttc
     1081 agcgacaatc tccgcgtccc agcgcaggcg cttgccgagc ggaccaatcg ccgtccagcg
     1141 cgaacgacgc tcaccggtaa tgctgacgga ttcaaggtgt cgcatgaaac gcggcaggtt
     1201 ttcaaagtgg cgccagaact gaaacgcctc ttctggagaa cagttcagtt gaatgctgct
     1261 gcgggccacc atctcttttg gattggacgc cgcgcgggat ccaaaatagg ccagtgctcc
     1321 tccggcggcg gcgatcgcca tgcctggttt ggagcggcgg gttaatccta ggacggccag
     1381 cgcgctgccg ccaatgatag cggtccagcg cgacacggct gagctggacg actgacgcgc
     1441 cgggatggca ttccctgcgt gaatgctcgc ggtctggttc atatacagca cgacctttca
     1501 gttatttatt aggacattta gtgttgcgat gatcgagggc agtggggggc tgtctgaaat
     1561 cgtggtgcgg ttttggaaac ttgaggaaaa tgctgaggtc tcgtgggact aacagccgtc
     1621 cggcagagca ggtaaggccg ggcgcagctc tcaaggtgat tgcaatgcgt gcattgtgtt
     1681 agcttgtgaa gtagtgtttg agtcgcagta gccggtggag aaaaaagatc cgaccggcag
     1741 cgagttcgga atcatgcttc gcaacgcatt cagaccgggt gacgcagtgc cgcgcagcgg
     1801 cgcttattgg gtaaaccatt atcagcaccg tgtggctcat ctagcgggcc tgaaggcagg
     1861 ggagcaattt ccagagtgcc ggaaatgcgg cgcacgcgtc cgctttgaag aggaactcag
     1921 tgatcgtcag gcgccggacg ccagcagcga ccccgatttc agcaacacag acgccgcgca
     1981 ggacaaaaag tcggcaaact agcccccaat tggagcggag aacccggcgt tagtagcgcg
     2041 acggggcagc gcggtcgggc ggcaggattt caggttcttt cgactctgaa ggtacctgct
     2101 tccgagtgac gaagaaaact gcagcagtcc aggtggggaa gagatcgagt ccgggcacca
     2161 cctcagccat gagggtgggc agaaaagccc agtgccagcc gagagtccga atcaggatcg
     2221 cggccacgag caaatccaga gcgtcgtcaa agggtgaggc gccgccttcc atgaacacag
     2281 gaaatgcgag aagttgcagg gcatcagcaa tgatggcgac cagccaggcg agccgatgct
     2341 cgggagactt gatggtcgcg agaaattcct gtttgaacat ggcacgctcc tccccggtaa
     2401 tagaagaata catggcgcgg agacgcaacg cgagtagaag gaatccccgt gatcgagtga
     2461 ccgggagatc cggtgacctg agccgcgcgg gtgcaccaaa aagaaagcaa ggtgtggaca
     2521 gaaaaggcgc atggcatttc tgccatgcgc catgagtttt ttgagcagtt aattagttcc
     2581 tatctcagac cgaattggaa gttgatggaa gatccatctg ccaatccgat ggtaaagacg
     2641 taagttgaac caggcgccaa gcctgaagtg ttcaggttga agatccactg ttgtgcagtg
     2701 ggatcgaatc ggaacgtggt gtcaggcgtg gtggaagttg gtaagatgtc caccggagtg
     2761 gagaccgtgc cagtgatcac agaagtgagc aggaagctgg tgaccgttcc gggtgtgcca
     2821 atggaaatgt tgttcacgtc gccgacgcgg aacttcactg gaacggtgcg gccagccttg
     2881 aagacgctgc taccgtcgcc gagcggagaa agaaccacgt ggctcgcctc accatccacg
     2941 atgcccccag gcaggaagat gatgtgcaga gttccgggga catatgtgat cgcgtagttg
     3001 gtggaggttt gtccggagca ggtgattgga tagcttccga caaagctgtt ggccagcgca
     3061 gtggtggtgc agatgagcac tccgttcagc gcactgggtc cctgtccgag aacgaacccg
     3121 ctatagctgg cggtgaacga cggattggga gcgttgagga tcttcgtggc gtcgttcgcg
     3181 gtgatggtaa gcgccgcgag gttgatggtt agggttgaag cggccgaagg gctcacgtca
     3241 aagatgcggt cgccgctgaa ggtggccgta attgagtgag tgcccgcact gagttgattg
     3301 gtgctgaagg ttgctgtgaa tgttgtcgaa tccagggtgc tggtgccgag gaccaggccg
     3361 ccgtcactga aagtcacagt gccgcccgga gtggccagcg cgccgttggc tcccactgta
     3421 gccgtgaagg tgacgttgtc accataagtg gccgtggctg gaacgttgag cgttaccgtc
     3481 gcaacagttt tagcagcctg gatttcccat gcgccgcgcc cgtgggtggc aatcttcagg
     3541 atgcggttgg cattctggaa tgacatatcg aagacggcaa cacgcgggag accgctgccg
     3601 aacgggttcc agctcgcgcc gccgttggtt gagatgaaca cgccgatatc gctgccggcg
     3661 taaatgacgt tggagttcac gggatcaatt gcgaagccgt ttatcggaac g
//
LOCUS       DASQYP010000288         2807 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_34434, whole genome shotgun sequence.
ACCESSION   DASQYP010000288 DASQYP010000000
VERSION     DASQYP010000288.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 2807)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2807)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2807
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_34434"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            194..520
                     /locus_tag="VE783_09295"
     CDS             194..520
                     /locus_tag="VE783_09295"
                     /inference="COORDINATES: protein motif:HMM:NF013677.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HYX53637.1"
                     /translation="MKNRKWTLDEKRHAVERMKTCSHRELAKELGIHKRQLYDWRDQL
                     RRLDGIPAAGRERELQRENQKLRETLARKVMEADFLQGALRRIEARRRASDGCGETVS
                     TKKSRS"
     gene            553..1398
                     /locus_tag="VE783_09300"
     CDS             553..1398
                     /locus_tag="VE783_09300"
                     /inference="COORDINATES: protein motif:HMM:NF033516.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS3 family transposase"
                     /protein_id="HYX53638.1"
                     /translation="MCQAAGVSRAGFYRDWQEREPEAEEMELRSCIQQIVVAHRGNYG
                     YRRVQRDLRDQGWRVNHKRVARIMAEDNLLAVRRRKFILTTESRHELPVYRNLARHME
                     LTGINQLWVADITYIRLRKQFLYLAVILDAFSRRVVGWALDDSLHAPLVVAALRRAIA
                     QRKPGPGLVHHSDRGMQYASQEYVALLEQHGIEPSMSRPGNPYDNAKCESFIKTLKQE
                     EIYTRQYRDRADLELHIAEFVEEYYNRRRLHSALGYRSPENFERSLLPQAAPVASLQM
                     EFFEA"
     gene            2070..2558
                     /locus_tag="VE783_09305"
     CDS             2070..2558
                     /locus_tag="VE783_09305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017953226.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(2Fe-2S)-binding protein"
                     /protein_id="HYX53639.1"
                     /translation="MAKINVTVNGTTHQSEVEPRTLLVHYLRDVLGLTGTHVGCETSL
                     CGACTVLVDGQAVKSCTMLAAQADGATVTTIEGLAAGGSLHPVQQAFWEHHGLQCGYC
                     TPGMIMATAQILQRNPDPSDEEIRHGLEGNLCRCTGYQHIVQAVQCAAKKMKSKSVTA
                     AR"
     gene            2571..>2807
                     /locus_tag="VE783_09310"
     CDS             2571..>2807
                     /locus_tag="VE783_09310"
                     /inference="COORDINATES: protein motif:HMM:NF013482.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53640.1"
                     /translation="MAEKFVGKSVKRTEDPRLIQGLAHYVDDIKLPDTLHAAFVRSIH
                     AHARIKSVDTSAAQKLPGVVAVYTGKDLAQKIGPV"
BASE COUNT          634 a          746 c          892 g          535 t
ORIGIN      
        1 catcggaaaa ccagaggaga ccggcggagg ccgccaaccc acgacttaac ggatcgcccc
       61 gagatggagt ggccatcacc cgggatgata ccggtcatcg ccggggatga aacgcctatc
      121 gccggggatg tggagtgacc ccctaaagtg agacagagag gagagtccca ctgtacagtg
      181 aatggagagt gggatgaaga accgaaaatg gactttggac gagaagcggc acgcggtgga
      241 gcggatgaag acctgctcac atcgcgagtt ggccaaggaa ttaggaatcc acaaacggca
      301 gctctatgac tggcgggacc agctgcggcg attagacggt attccggcgg caggacggga
      361 gcgagagctg cagcgggaga accagaagtt gcgggagacg ctggccagga aggtgatgga
      421 agcggatttc ttgcagggtg ccttgcgaag aatcgaggct cgacgccggg ccagcgacgg
      481 ctgtggcgaa actgtgtcta cgaagaaatc cagatcgtag tccaggggca agaacaccct
      541 agtatcgagt cgatgtgcca agcggcggga gtgagccgcg ccggctttta ccgggactgg
      601 caggaacggg aaccggaagc cgaagagatg gagttgcggt cctgcatcca gcagatcgtg
      661 gtggcgcacc ggggcaacta cggctatcgc cgggtgcaac gcgacctgcg cgaccagggc
      721 tggagggtaa accacaagcg cgtagcccgg atcatggcgg aagataatct gctggcggtg
      781 cggcggcgca agttcatcct taccaccgag agccggcatg agttgccggt gtatcgcaac
      841 ctggctcgtc atatggagtt gacggggatc aatcagctct gggtggctga tatcacctac
      901 atccggctgc gcaagcagtt tctgtattta gcagtgattc tggacgcgtt ctcgcggcga
      961 gtagtgggat gggcgctgga cgattctctg cacgctcctt tggtggtggc agctttacga
     1021 agggcgatcg cgcaacgcaa acccgggccc gggctggtgc accattccga tcgcgggatg
     1081 cagtacgcct cgcaggagta cgttgcctta ttggaacagc acgggattga gccgagcatg
     1141 agccgtccgg gaaaccctta tgacaatgcc aaatgcgaga gcttcatcaa gacactgaaa
     1201 caggaggaaa tctatacccg ccagtaccgg gaccgagcgg atctggaact gcacatcgcc
     1261 gagtttgtgg aggagtacta caatcggcgg cgcttgcatt cagccctcgg ttatcgctcg
     1321 ccggagaact ttgaacgtag tttgttaccc caagcggcac cggtggcgag cctacagatg
     1381 gagttttttg aggcatgagg gaatctatcg ttccgatgga gcaacgaacc gggaggagcg
     1441 ttgaactcct cccgtctcat cgtcgcgatg agttccagct gagtattcct tggcgagttg
     1501 ctctccagca gggctcgcct ctgcttcctc agccgccctc agcttcgcaa gttaaacatc
     1561 cgttcgtcga ccgatttaca gcgaacggca accggggact ttccccactg tctcaactga
     1621 aggggtcacc ccagatgagt ggggatgaat ggggatgaat tggggccccc taagtatcgg
     1681 gccatggagg gaacgcggcc ccagtcgggg aaagcttggg tgacccaagc aaaaccttgg
     1741 gtgacagaaa atttttgggt gacccaaggg tcattttgaa ccaagtgctg tgtttgcaac
     1801 gaatctgtaa aaaaccccgg caccctcgcg aaaatcgctg gcgcaggtca acaattcagc
     1861 cagttggtga tcgaggagaa gccgctagct gatgttttcg ttcaacatcg ggcgagatca
     1921 ggcgagcgtt tacccgcgct cacagcatgc actcacgaaa aggcgtacaa ttcttgtcgt
     1981 tttgccggac gtttccggcg ctgcctgtaa gccactgctt tatgagattt tcacttcctg
     2041 ttttttcctg tcagttgaag gggtgttgaa tggcaaagat caatgtcaca gtgaacggga
     2101 ccacgcacca gagtgaagtg gagccgcgca cgctgcttgt ccattattta agagacgttc
     2161 tcggcctcac gggcacgcac gtgggctgcg agacctccct gtgcggcgcc tgcaccgtcc
     2221 tggtcgacgg gcaggcggta aagtcctgca ccatgctggc ggcccaggcc gacggcgcca
     2281 cggtcacgac cattgagggt cttgcggccg gcgggagcct gcatcctgtc cagcaggctt
     2341 tttgggagca ccatggactc cagtgcggct actgcacgcc gggaatgatt atggccacgg
     2401 cgcagatcct gcagcgcaac cccgatccca gcgacgaaga aatacgacat gggctggagg
     2461 gaaacttgtg ccgctgcacc ggctatcagc acattgtgca ggctgtacag tgtgctgcca
     2521 agaagatgaa gtcaaaatct gtgactgcag cccgatagga cggaggactt atggcggaga
     2581 aattcgtagg caaaagcgta aagcgcacgg aagatccccg gcttatccag gggctggctc
     2641 attacgttga tgacatcaag ctgcccgata cgctgcatgc ggcctttgtg cgctccattc
     2701 acgcccatgc gcgcatcaag agcgttgaca ccagcgcggc acagaagctg cccggcgtag
     2761 tggcggttta taccgggaaa gatctggcgc agaagattgg cccggtg
//
LOCUS       DASQYP010000289         8096 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_95630, whole genome shotgun sequence.
ACCESSION   DASQYP010000289 DASQYP010000000
VERSION     DASQYP010000289.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 8096)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8096)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8096
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_95630"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            722..2416
                     /gene="rpoD"
                     /locus_tag="VE783_09315"
     CDS             722..2416
                     /gene="rpoD"
                     /locus_tag="VE783_09315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012607388.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor RpoD"
                     /protein_id="HYX53641.1"
                     /translation="MVLALDDKFEDIKKLIDAGKEKGYLTYDQVNDLIPGDVHSPDDL
                     DDLLTTIGTQGIDVLDSSKGLPSEQKFDEVEEGEDVELDLTPSALDKTNDPVRMYLRE
                     MGTVPLLTREGEVEIAKRIERGQLRVLKALSRSPIVIREILALGEDLRRGVRSIKELV
                     AFDEEEITDEIVQARLKDFVGKIDDIGKHHKKVLALEEKLEQIQQKKKPKDYRRCRWQ
                     LGREQVEVSVGIRRLKFTHPERKRLIEKVNKTVDSMRQLDRQINNLEKKIEATRVEET
                     RREYRRIQKSHRLELEKVEKDTGVSYQELKRTQREIIQGDVDAEAAKRELIEANLRLV
                     VSIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRAIAD
                     QARTIRIPVHMIETINKLIRTSRQLVQELGREATSEEIAKRMDIPVAKVRKVLKIAQE
                     PISLETPIGEEEDSHLGDFLEDRSMVSPAEAVINVNLQDQTAQVLRSLTPREEKVIKM
                     RFGLEDGSEHTLEEVGQSFAVTRERIRQIEAKALRKLRHPSRSRKLKAFMDGIREA"
     gene            complement(2840..3457)
                     /locus_tag="VE783_09320"
     CDS             complement(2840..3457)
                     /locus_tag="VE783_09320"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53642.1"
                     /translation="MSQLTAPVAKSDRRFVLFFLVVIVVIAIPALNVPWAFYMGGKFH
                     VMPYWQGWGRAHSNSAGGDYLIYIFFYPDHGKFRNLAYVQGTGSLCTPRGETFGLKLG
                     GNFDRPAGRDSNGQRVGLYVYNRSVKTQFLGGYHKPSLNLRGKWSNPDLVMDDDGSIA
                     RNFNPDGSLAESAVGRPYKSEVSVITFHEGSVSDFNAACDALKKR"
     gene            complement(3488..4582)
                     /locus_tag="VE783_09325"
     CDS             complement(3488..4582)
                     /locus_tag="VE783_09325"
                     /inference="COORDINATES: protein motif:HMM:NF015056.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016811 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds, in linear amides
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetamidase/formamidase family protein"
                     /protein_id="HYX53643.1"
                     /translation="MHLKSDLYVPATPDTIRWGFLPDNSAKPIASVKSGATVTFDTLS
                     HEGILEDQGRDPVKFFGGLGVQPVQVLNDAKAITASTIQHDFAKDGPHIVIGPLEIEG
                     AQPGDVLKVEMVSLLPRVPYGVISNRHGKGALPGEFPETPDTESGASAANPQAYHNVS
                     TFVPIRQIGGKWYGIVKGAQGPEAHIPVAPFMGTMGVAPNTAGRPNSVPPGDYGGNMD
                     IHYLTAGATLYLPVQVAGGMFFIADPHFAQGNGEVALTAIEGSLRSTLRFTVLKAGDA
                     QIPAKTKLNGPFAETPDYWIAIGLDPDLNEAMKKATREAIRFVSERLGMDRATAMAYL
                     SAGADFEVSQVVDRTKGVHALIRKQDFKQK"
     gene            4980..8006
                     /locus_tag="VE783_09330"
     CDS             4980..8006
                     /locus_tag="VE783_09330"
                     /inference="COORDINATES: protein motif:HMM:NF017021.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AsmA family protein"
                     /protein_id="HYX53644.1"
                     /translation="MRKLGIAVLIIVVLLVAAVLIIPHLIDVNQYHAQIQQQLQKRLG
                     RQVTLGDMHLSLFPPSFQVQDVNIGEDPRFSFNQSRPFATAEKLAVSVELLPLLHKDI
                     QVKSLELIHPHIELVRDTQGNWNFATLGQEPKPSATEEAAKKAPAPAPSQTPAQPAPQ
                     SGKQPAGQLSLANLAITDGQVAITDQQKHQSRAVYDHIDLNVSDYAPDKQFNLKAAAH
                     LPGSGKQAIFLQGKGGPIKQADMLNTPFAGTLKLDQVALSSVEAFLNSQALKGIETVI
                     SGETSVNNSGGKLTAGGNLKLDNPKIRNVDVGYPITLDYDVTDDLTSDVIDIKKGNLK
                     LGATPVTIAGTLNSKPNPAQVDLKLTASNASIEEAARLASAFGVAFGQGMDVKGTVNA
                     NIQAKGASDKPAMNGQLSAHNLRISGKDIPQPVNVPAIDLALTPDTIRSNDFSATTGS
                     TTVNMNFALANYTGNNSTINATLRAPNAKIAEILSMGKAAGVSALDGITGDGLLNLDV
                     HAQGPLKNTSAMVFSGTGKIQNASLKLPSLTKPVQIKNSDIQFSQNSATLQNLAAGIG
                     QTNATGSMTLKNFEAPQVQFTLNADKVDVAELQQLTNAQPAPAKRAALEHDFWQIVPR
                     AEAQAHPAASTQPGMIQKMTGSGTVNIGTIVYNDLLLNNAHANVTLDHGLIKLNPVTS
                     DIYNGKETGSITIDMRPAQPVYTVNLKTDKVDANKLISSVSDLKQTLYGILASNVNAS
                     FSSSSADAIARSLNGTLALNLTNGKLMKLDLLHELAAINKFTGNALPAPQGFTNLVSL
                     VGNFDVKNGVAQTNNLKAVIDGGTLAAAGTANLANQSLNMKVTAVLNKALSQSVGGSQ
                     IGGFMNTALANNQGELVLPVIVTGTFQHPQVAPDLEQIAQMKLHNLLPSTKNPAELTT
                     GILGQILGGKNAGTTGQPGQKPQDAIGGILGAITGKGQQQQQPAPSGQPAQPGQAKAT
                     PAPSATPQQQSPQDAVGNLLNQVLKGKKASPTPTPQ"
BASE COUNT         1959 a         2316 c         2292 g         1529 t
ORIGIN      
        1 ggtgacgcgc ctacggcgct ctatgatttt tctcggcccc ggggtgcgac tgaagcagaa
       61 aagctggaag ttgacaggaa gatagcctgt gccctcaatt gaggatgttg gtcagggatg
      121 aaactgaggt taggcttcgt cgagcaccag cgctaaagcg cacgggtttg tgggcgcgct
      181 tacgcggccc taaagggccg ctcttccacc caaacccaaa ccacgcgcac ccaaagcacc
      241 gcgcgcccaa accggcttac atgctctgag aaaactccct gaatcgggca cggcagaaga
      301 gtttgctgga attctctttc gttccaaccc tttctgttga aacgggttac ggcttcaaat
      361 gactatgaca attgagttca gggcagcgtg ccagacggcc ctaatccggc gtgcttaggc
      421 aaaaataatg cgccgagaag cgccaagggg gtgcgaaacc atctaaggtg cagggcatct
      481 atatattacg ggcgttttga acctgtttat ttcacggaac ttagggctgg aggggctttt
      541 caggtgaggg cggaacatga taacctgagt accttcgggg tttgcaccct tcccaatcca
      601 tattccgtca gcattctcgc tttaggggtc ccaaagcgca gtacggccgt gcccggaaac
      661 agagaagaac gcttgagtga gaacgaacaa ggcgtttgag taagaccgaa aaaaggaacc
      721 ggtggttttg gctttagacg acaaattcga agacataaaa aaactgatcg atgcaggtaa
      781 ggaaaaagga tacctaacct acgaccaggt gaacgacctg atcccgggtg atgtgcattc
      841 gccggacgat ctggacgacc tgctgacgac gattgggacc cagggcattg acgtcctgga
      901 cagctccaaa ggactgcctt ccgaacagaa gtttgatgaa gtggaggaag gcgaggacgt
      961 tgagctggat ctcacgccga gcgcgctgga caagaccaac gatccggtgc gcatgtacct
     1021 gcgcgaaatg ggcacggtgc cgctgctcac gcgcgaaggt gaagttgaga tcgcaaaacg
     1081 gattgaacgc ggacagctcc gcgtgctgaa agcgctttcg cggtcgccga ttgtgatcag
     1141 ggaaatactg gcgctgggtg aggacctgcg gcgcggcgta cggtcgatta aagagctggt
     1201 ggcgttcgat gaagaggaaa ttactgacga gattgtgcag gcgcggctga aagatttcgt
     1261 cggaaagatt gatgacatcg gcaagcacca caagaaggtg ctggcgctgg aagagaagct
     1321 ggaacagatc cagcagaaga aaaagccgaa agactaccgc cggtgccggt ggcagcttgg
     1381 ccgcgagcag gtggaagtct cggtgggaat ccggaggctg aagttcaccc atccggagcg
     1441 caagcggctc atcgagaagg tgaacaagac ggttgattcc atgcggcagc tcgatcgcca
     1501 gatcaacaat ctggagaaga agatcgaggc gacgcgggtg gaggagacgc ggcgggagta
     1561 tcgcaggata cagaagtcgc accggctgga gctggagaag gttgagaagg acaccggcgt
     1621 cagctatcag gagctgaagc ggacgcagcg ggagatcatc cagggcgacg tggatgcgga
     1681 agccgcgaag cgggagttga tcgaggcgaa cctgaggctg gtggtgtcga tcgcgaagaa
     1741 atataccaat cgcgggctgc agtttcttga cctgatccag gaaggaaaca tcggcctgat
     1801 gaaggcggtg gataaattcg agtatcgccg cggatacaag ttctccacct acgccacgtg
     1861 gtggatccgt caggcgatca cgcgagccat tgccgatcag gcgcgcacga tccgaatccc
     1921 ggtccatatg atcgaaacga ttaataagct catacggacc agccggcaat tggttcagga
     1981 acttggacgg gaagcaactt cagaagagat cgccaagcgc atggacattc ctgtggcaaa
     2041 ggttcgcaag gtcctcaaga ttgcgcagga gcccatctct ctggagacgc ccatcggcga
     2101 agaggaagat tcgcatctgg gcgatttcct ggaggatcgt tcgatggttt cgccggccga
     2161 agcggtgatc aacgtgaacc tgcaagacca gaccgcgcag gtgctgcgtt ccctcacgcc
     2221 ccgcgaagag aaagtcatca agatgcgctt tggcctggaa gacggctccg agcacacgct
     2281 tgaagaggtc ggtcaatctt tcgcggtcac gcgcgagcgc atccggcaga ttgaagccaa
     2341 ggcactgcgc aagctgcgcc atccatcgcg ttcacgaaag ctgaaggcgt ttatggatgg
     2401 aatacgcgaa gcctaaagaa gcaaccagta ctcgtgaaaa ggctctgctg aacgcagcgc
     2461 ctttttttat tgatcacatc gggatttcct cggcgggcgc tctacctcag cgatttcttc
     2521 tgaaccagcg cgtgcaccag accgccaagc cccacaaggg ccgttaagaa gcacgccaga
     2581 agaatggctc gcgataatag ctggagccta acccagattt ggggcaccga atagaacggc
     2641 cacgatgcat caactagcac cagcgtacat gccaatgcgc cacccaccag caaagccaat
     2701 gacaaatgga tgcttggtgc tcgctttgtc atcgcgccct ccacagccag aggaacatct
     2761 tcttaatgaa acacaatccg aagaaaatgt tgcgccgggc gtctcagtgc ccacgattca
     2821 tggcctgaga ctttatcgct tatctcttct ttagcgcgtc acacgccgca ttgaaatcgc
     2881 tgacgctgcc ttcatgaaac gtaatcactg agacctcgct cttgtaagga cgccccacag
     2941 cactctccgc cagcgagcca tcgggattga agttgcgcgc aatggagccg tcgtcatcca
     3001 tcaccagatc aggattgctc cacttgccgc gcaggttcag cgatggcttg tggtatccgc
     3061 ccaaaaactg cgtttttaca ctgcgattgt agacgtagag ccctactctt tggccattgc
     3121 tgtctcgccc ggccggtcta tcgaagttgc cgccgagctt gagcccgaac gtctctcccc
     3181 gcggcgtgca caatgagccg gtgccctgaa catacgcaag attgcggaac ttgccgtgat
     3241 caggatagaa gaaaatgtaa atcaggtaat cgccgcccgc ggaatttgag tgagcgcgtc
     3301 cccatccctg ccaataaggc atcacgtgga acttccctcc catgtagaac gcccagggca
     3361 cgttcaaagc gggaatggca atcacgacaa tcaccaccag aaaaaacaga acgaaccgcc
     3421 ggtcgctctt ggccactggg gctgttagct ggctcatatt ctcctcagcg tctcacgatt
     3481 gagtccgcta cttctgtttg aaatcctgtt tgcggatcag cgcatgaaca cccttcgtgc
     3541 gatcaaccac ctgtgacact tcaaagtccg cgcccgcact gaggtaggcc attgctgtcg
     3601 cccggtccat gccaagtctc tctgaaacga accggatcgc ctcgcgcgtg gccttcttca
     3661 tggcttcatt cagatcggga tcgagcccaa tcgcaatcca ataatccggc gtttcggcga
     3721 aggggccgtt gagtttggtc tttgccggaa tctgcgcatc tccggctttc aataccgtga
     3781 agcgaagtgt cgagcgcaac gagccttcaa tcgcggtcaa cgccacttcc ccgttcccct
     3841 gcgcaaaatg cggatcggca ataaagaaca ttcctcctgc tacctgcaca ggcagataaa
     3901 gcgtggcgcc cgcggtgagg taatggatgt ccatgttgcc gccgtaatcg cccggcggaa
     3961 ccgaattcgg cctgcctgcg gtgttgggcg caacgcccat ggtccccatg aatggcgcca
     4021 cgggaatgtg cgcttccgga ccctgcgcgc ccttcacaat gccgtaccac tttccgccga
     4081 tctggcgaat gggcacgaac gtagaaacgt tgtggtaagc ctgcggattg gccgcgctcg
     4141 cacccgactc agtgtcaggc gtctcaggaa actctcccgg cagcgcaccc ttgccgtggc
     4201 gattgctgat cacgccatag ggaacccgcg gcagaagcga gaccatttcc accttcagca
     4261 cgtcgcccgg ctgcgcgcct tcaatctcca gtggccctat cacaatgtgc ggaccatctt
     4321 tggcaaaatc atgctgaatg gtggaagcag tgatcgcctt agcatcgttc agcacctgaa
     4381 caggctgcac gccgaggccc ccgaaaaatt tcaccggatc gcggccctga tcttcgagga
     4441 tgccttcatg cgacagcgta tcaaacgtca ccgtcgctcc ggatttcacg ctggcaatcg
     4501 gcttggcgga attgtccggc agaaagcccc agcggatggt gtccggcgtg gcgggaacat
     4561 agagatctga tttcaaatgc actgaacttc cggggaccgg cttatcagcc agaggctgca
     4621 ggactgcgtt ttgggccgtg agagtgaacg tgcaacaacc aacaaacagt gacaaccgga
     4681 tgagcgaaag gcaaaaacca ctgggaatct tcattttggg ggatgcgcct cctgagcgct
     4741 ggaattctac tccagcatgc gggcaaccca gacagggaaa aagtgacaag gatatccctt
     4801 tttgccggtc aacctgaggg tccggcagca ttcttaagca ctcgcccgga ggcgcagcgt
     4861 catctaagtt acaagaggta agttataaag aggcctgccg gccagaaccg tactctcact
     4921 tctctctgct ggtaccctca agcgccattt tatttcgaat tcattcaggc aggtgagccg
     4981 tgcgcaaact tggaattgct gttctcatca tcgtcgtgct gctggtggcg gcagtgctga
     5041 tcattccgca tctgattgac gttaatcagt accacgccca gatccagcag caactgcaga
     5101 agcggctggg acgccaggtg actttgggcg atatgcatct cagccttttt ccgccttctt
     5161 tccaggtgca ggacgtaaac atcggtgagg acccgcgctt cagcttcaac cagtcgcggc
     5221 cgtttgccac cgccgaaaag ctggctgtga gcgtggaact gctgccgctg ctgcataagg
     5281 acatccaggt aaagtcactt gagctgatcc atccgcatat tgaactggtg cgcgataccc
     5341 agggtaactg gaatttcgct acgctgggac aggaaccgaa accttcggcg acggaagaag
     5401 ccgcaaagaa agctcctgct ccggcgccct cacaaactcc tgctcagcct gcgcctcaga
     5461 gcggaaagca gcccgcgggc cagctttcgc tggcaaatct tgcaatcact gacgggcagg
     5521 tggcaatcac tgaccagcag aaacaccagt cgcgcgcagt gtatgaccac attgatctca
     5581 acgtaagcga ctacgcgccg gacaagcagt tcaacctgaa agcggcggcc cacctgcccg
     5641 gctccggcaa gcaggccatc ttccttcagg gcaaaggcgg tcctatcaag caggcagaca
     5701 tgctcaatac tccgtttgca ggaacgctga agttggacca agtggcgctt tcttccgtgg
     5761 aggcgtttct caactcgcag gccttgaaag gcattgagac ggtcatctcc ggtgaaactt
     5821 ccgtcaacaa ctccggcggc aagctcacgg cgggcggcaa cctgaagctg gacaacccga
     5881 agatccgcaa tgtggatgtg ggctatccaa tcaccctgga ctatgacgtg acggacgatc
     5941 tgaccagtga cgtgatcgac atcaagaaag gcaacctcaa gttgggcgcc acgccggtga
     6001 ccatcgccgg cacgctcaac tccaagccca atccggcgca ggttgacctg aaacttactg
     6061 cttcaaatgc ttccattgaa gaagcggcac ggctggcgtc ggcttttgga gtcgctttcg
     6121 gccagggcat ggacgtgaaa ggcacggtga atgccaacat ccaggccaag ggtgcttctg
     6181 acaaaccggc aatgaacggg cagctctccg cccacaatct gagaatcagc ggcaaggata
     6241 ttccgcaacc ggtgaatgtg cccgctatag atctggcgct cactccggac acgattcgct
     6301 ccaatgactt ttccgccaca accggctcaa ctaccgtgaa catgaatttt gcgctggcga
     6361 actacaccgg caacaacagc accatcaacg ccacgctgcg cgcgccgaat gcaaagattg
     6421 cggagattct gagtatgggc aaggccgcag gcgtttctgc gctggacggc atcaccggcg
     6481 acgggctcct gaaccttgac gttcatgcgc aagggccgct gaaaaatacc tccgccatgg
     6541 tcttcagcgg gacgggaaaa attcagaacg ccagcctcaa gctgccgtcg cttaccaagc
     6601 cggttcagat aaaaaactct gatattcagt tcagccagaa ttcggccacc ctgcagaacc
     6661 tcgccgcagg catcggacag accaatgcta ccggatccat gacgctgaag aactttgagg
     6721 cgccgcaagt ccaattcacg ctcaatgcgg acaaggtgga tgtggcggag ctgcaacagc
     6781 tcaccaacgc gcagcccgct ccggccaagc gcgcagccct ggaacacgat ttctggcaga
     6841 ttgtgccccg cgcagaggca caggcccatc ctgccgcttc cactcagccg ggcatgatcc
     6901 agaaaatgac cggcagtggt accgtgaaca tcggcacgat tgtttacaac gatctgctgc
     6961 tgaacaacgc gcacgccaat gtgacgctgg accatggctt gatcaagctg aatcctgtca
     7021 cctcggacat ttacaacggc aaagagaccg gctcgatcac gattgatatg cgtcccgctc
     7081 agccggtcta cactgtgaat ctgaagactg acaaggtcga tgccaacaaa ttgatttcat
     7141 cagtctctga cttgaagcaa acgctttacg gaattctggc gagcaacgtg aatgccagct
     7201 tcagttccag ctccgccgac gcgatcgcac gcagcctaaa cggcacgctg gcgctgaatc
     7261 ttaccaacgg caagctgatg aagcttgacc tgctgcacga gcttgcggcc atcaacaaat
     7321 tcaccggcaa cgcgctgccc gcgccccagg gatttacgaa cctggtctca ctggtgggca
     7381 acttcgacgt gaaaaacggc gtagcccaga ccaacaatct gaaagccgtg atcgatggcg
     7441 gaacgctggc ggcagccgga acggcgaacc tggccaacca gtcgctcaac atgaaagtta
     7501 ctgcggtgct caataaagcg ctgagccagt ccgtgggtgg atcgcagatc ggcggattca
     7561 tgaatacggc actcgccaac aatcagggcg agctggtgct gccagtgatc gttaccggca
     7621 cgttccagca tccccaggtt gcgccagatc tggagcagat tgcgcagatg aagctgcaca
     7681 acctgctgcc ctcaacgaag aacccggcag agctcaccac cggaattctg ggacagattc
     7741 ttggcggcaa gaacgccggg accacaggcc agccgggaca gaagccgcag gatgcgattg
     7801 gcggaattct gggcgcgatc accggcaagg gacagcagca acaacagccg gcaccgtcgg
     7861 gccagcccgc gcagcccgga caagctaaag cgacgcctgc tccgagcgca acgccgcaac
     7921 agcagtcgcc gcaggatgcc gtgggcaatc tgctgaacca ggtgctcaag ggaaagaaag
     7981 cgagtccgac gccgacaccg caatagtagc gagcaagcca ctagctagaa gccatctcaa
     8041 aaatgagtta accagactga tggctcgggg ctgttgattg gatcgcctgg gcgact
//
LOCUS       DASQYP010000290         6879 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_120554, whole genome shotgun sequence.
ACCESSION   DASQYP010000290 DASQYP010000000
VERSION     DASQYP010000290.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 6879)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6879)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6879
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_120554"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            84..368
                     /locus_tag="VE783_09335"
     CDS             84..368
                     /locus_tag="VE783_09335"
                     /inference="COORDINATES: protein motif:HMM:NF016141.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GlsB/YeaQ/YmgE family stress response membrane
                     protein"
                     /protein_id="HYX53645.1"
                     /translation="MVVLWWIIVGLIAGWATGKIMRGSGYGALADILLGIAGAIVGGW
                     IMRALGGTGQGGTIYTILIAIVGAVVLTMVFRLITGRGKTSSSGGIRRAA"
     gene            complement(480..908)
                     /locus_tag="VE783_09340"
     CDS             complement(480..908)
                     /locus_tag="VE783_09340"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53646.1"
                     /translation="MNSQEESDLLLRATVGVAETQFQHGRFLPFAVTLGQERKANTLF
                     TDDLEPDASRDQIVEYWRSELRNVIARQQMRAACHCTVARVRVAEGSTTPVMVIHLEH
                     IEGGANDFVYPLRKEPDGKITLGEPRSISTQREIFGTSGY"
     gene            complement(936..1316)
                     /locus_tag="VE783_09345"
     CDS             complement(936..1316)
                     /locus_tag="VE783_09345"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53647.1"
                     /translation="MSLKALVFAIHFVLLTAMLCCTVYRLLIAKREGDQRRSLKQRGL
                     PWRVNARSRRASRRMSLYFSLLWAGVCLCLLMEGNDEFRIFWFFFGLFFLVVAAIHFD
                     AARIQKFFRSRFLSPDPQSEIRLS"
     gene            complement(1376..2461)
                     /gene="hemB"
                     /locus_tag="VE783_09350"
     CDS             complement(1376..2461)
                     /gene="hemB"
                     /locus_tag="VE783_09350"
                     /EC_number="4.2.1.24"
                     /inference="COORDINATES: protein motif:HMM:NF006762.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0004655 - porphobilinogen synthase
                     activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0033014 - tetrapyrrole biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="porphobilinogen synthase"
                     /protein_id="HYX53648.1"
                     /translation="MPFPVTRLRRMRQSEPLRSLVRETHLEPTNFIYPLFVCPGEGIR
                     REIGSMPGVFNLSVDEAVKEAREARALGLGGIILFGLPEKKDEIATGAWADDGIVQKA
                     TRAIKSEVPDLVVLGDVCLCEYMSHGHCGIVKTTRKPAAQPRTEVVGAGTGAAAREQM
                     IATRVDAAIESAYEFEIENDTTLDILAKTAVSQAQAGIDIIAPSDMMDGRVAAIRKGL
                     DDAGFTNTPILSYAAKFASGFYGPFREAADSTPQFGDRRSYQMDGANLREAMREIELD
                     LEEGADMIMVKPAMPYLDVIHEARQRFDVPISAYQVSGEYAMLQAAIRNGWLDKNRVM
                     LESLQSIKRAGASLILTYFAKEAARLL"
     gene            2734..2943
                     /locus_tag="VE783_09355"
     CDS             2734..2943
                     /locus_tag="VE783_09355"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53649.1"
                     /translation="MPRKPAAPKDDRLWIAPNFSLANRSLKAPPFKPLKREFPPLAPE
                     LDNDSSVARLLELADIALQTGKDKE"
     gene            complement(2971..4134)
                     /locus_tag="VE783_09360"
     CDS             complement(2971..4134)
                     /locus_tag="VE783_09360"
                     /EC_number="4.4.1.13"
                     /inference="COORDINATES: protein motif:HMM:NF005456.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004121 - cystathionine beta-lyase
                     activity [Evidence IEA];
                     GO_process: GO:0019346 - transsulfuration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cystathionine beta-lyase"
                     /protein_id="HYX53650.1"
                     /translation="MSKDWKTKLIQSDAEIPQGFRSLATPIYRGSTVLFDKAGAADEH
                     WNHYDHGYTYGLYGTPTTLELAVRVCELEHGYRTFITPGGQGAISLVHLALMRAGDHV
                     LIPENIYGPNRKFANDVLRRFGVEVSYYPPDAGAGIEKEFRSNTRVVWCENPGSVTME
                     VQDVPTIAAAAHKRGALVVLDNTWASGVYFDAFAHDVDVTLQALTKYIGGHSDVLLGS
                     LTVRDPKLFDLIGQTYQVLGCAASPDDCSLALRGMKTLAVRLKQVEQSALELAKWLSA
                     RPQVERVLHPALPSCPGHELWKRDFTGSSGLFSFVFHDNVSKEQVLKFVDSLELFEIG
                     YSWGGVNSLAMTYDLQSPKRPAYGSRLVRLYTGLEDVEDLKRDVAKALEVIGS"
     gene            complement(4189..5565)
                     /locus_tag="VE783_09365"
     CDS             complement(4189..5565)
                     /locus_tag="VE783_09365"
                     /inference="COORDINATES: protein motif:HMM:NF017135.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050080 - malonyl-CoA decarboxylase
                     activity [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="malonyl-CoA decarboxylase family protein"
                     /protein_id="HYX53651.1"
                     /translation="MPEFLNNLLQRLRGERGNNMQLLCRELLSHRGEASQTVLAQHII
                     EQYRQMGSEQQLKFFQLLANDFGTDKQVIQKAIENYGRGATPVNEAALAAATEPPRQE
                     LFRRINTGPSGTETLVRMRRDLQRLLPGHSDLTAVDSDLKHLFRSWFNRGFLRMERIN
                     WQTPAITLEKLIDYESVHEINGWPDLHRRLAADRRCFAFFHPSLPGEPVIFIEVALTK
                     GLARAIDPLLDVNAPVLAADEADTAIFYSINNCLEGLRGIPFGNFLIKQVVDELRAEL
                     PRGRVYSTLSPLPGFAKAVNASDNPDGFTRERLGRLLKEFAGELATEAALSDPADAIF
                     ELLKDPFSHQKVLTAPLRRMAVAYLTQMKRNGRPVDPVANFHFSNGARLEAVDPFANA
                     RGYGIRESFGMMVNYRYVPDDLADNHERFIETGDTPVSASLLTERRVSGELWHGPRKK
                     QAGEKAAG"
     gene            complement(5619..6428)
                     /locus_tag="VE783_09370"
     CDS             complement(5619..6428)
                     /locus_tag="VE783_09370"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HYX53652.1"
                     /translation="MPTTNLVHSPLAGGPTEIFYREFGAGRPLIFLHGGWGYEIYPLS
                     NEQTSLPGVRLIAPDRSGYGRSSKPALFGVDLHPRAAHEMLLFLKALAIQRCILWGHS
                     DGAVIACWMAMLAKQSPEVKIEGLILEALHYDREKPHSRDFFIAMARDPDSFGEKITS
                     VLAHDHGEQHWRAALIGDGESWLEIARTATPDRKDVYDGRLSEMREVPVAVLHGAGDP
                     RTEPGEIDRVRQELPQAEVQLIPNAGHSPHSNSMSREEFTERLHAVLRKWG"
BASE COUNT         1413 a         2059 c         1910 g         1497 t
ORIGIN      
        1 tgccctctaa ccagtaagaa ctaagtggga gaggcacggt gggtacgcct ctctgttccc
       61 ctgaccttcc tgaggaggag tgaatggttg tactttggtg gattatcgtg ggactgatcg
      121 ccggttgggc gacagggaag atcatgcggg gctcaggcta cggtgcactg gcagacattc
      181 tgctgggcat cgcaggagct attgtgggtg gctggatcat gcgggccctc ggcggaactg
      241 gccagggcgg tacgatttac accatcttaa ttgcgattgt gggagctgtg gtcttgacca
      301 tggtctttcg tctcatcacc ggaaggggaa aaacgtccag cagcggcggc atacgtcgcg
      361 cagcttgaaa tcccttcctg aatcagcgtt gattcagacc tctgatcagc cgcggagcac
      421 gccaggaacc ctggcctgtt tcgcggctgg ttgcgcttat agctggttaa gtcccgagat
      481 caatatccgc tcgtaccgaa gatttcgcgt tgcgttgaaa tcgacctggg ctctccaagc
      541 gtgatcttcc catccggctc tttcctgagt ggataaacga aatcattcgc tccgccctca
      601 atgtgctcca ggtggatcac catcaccggc gtggtagagc cttctgccac gcgcactcgc
      661 gccacagtgc agtggcatgc agcccgcatc tgctggcgag cgatcacatt gcgcagctca
      721 ctccgccagt attcaacgat ctggtcgcgg ctcgcgtccg gctccagatc atctgtaaag
      781 agtgtattag ctttgcgctc ctgtccaagc gtcacggcaa aaggtaggaa ccggccatgc
      841 tgaaactgcg tctctgccac cccaactgta gcgcggagca gaaggtcgga ttcttcctgc
      901 gagttcatca agacacccag aacgctcggt tgtgtttacg agaggcgtat ctcgctctgc
      961 ggatcgggtg aaaggaatcg cgagcgaaag aatttctgta tgcgtgctgc gtcaaaatgt
     1021 atcgccgcca ctaccaggaa gaagagtccg aagaagaacc agaagatcct gaactcgtca
     1081 tttccctcca tcaaaaggca gaggcagacg cccgcccaca ggagcgaaaa ataaagtgac
     1141 atcctccggc tcgcccggcg tgaacgcgca ttgacccgcc acggcagacc tcgctgcttc
     1201 agtgaccgtc gctggtcccc ttcgcgcttt gcaatcaaaa gccggtacac ggtgcagcag
     1261 agcatcgccg tgaggagcac aaaatggatt gcaaacacca gagctttgag tgacatcctg
     1321 gactctactc ctggctcgcc agctgcgatt ttcagcgagc cgctgatcag tgtcgttaca
     1381 aaagccttgc cgcttctttg gcgaaatacg tcaagatgag gcttgctccc gcgcgcttga
     1441 tggactgcag cgactcgagc atcactcgat tcttgtccag ccagccgttc cggatggcgg
     1501 cctgcaacat agcatattca cctgatacct ggtaagccga aatcggcacg tcgaaacgct
     1561 ggcgcgcctc gtgaatcacg tcaaggtacg gcatggcggg cttcaccatg atcatgtcgg
     1621 cgccttcttc cagatcgagt tcaatttcgc gcatggcctc gcgcaggttg gcgccgtcca
     1681 tctgatagga gcgccggtca ccgaattgcg gcgtggaatc cgccgcctcg cggaacggcc
     1741 cgtagaagcc cgacgcgaac ttcgcggcat acgaaaggat cggcgtgttc gtgaaacctg
     1801 catcatccaa tcccttgcgg atggccgcca ctcggccgtc catcatgtct gaaggagcaa
     1861 tgatgtcgat tccagcctgg gcctgtgaca cagccgtctt ggccagaatg tccagagtcg
     1921 tgtcgttttc aatttcgaac tcgtaggcac tttcaatggc ggcatcaacc cgcgtggcaa
     1981 tcatctgttc ccgcgccgcg gcccctgtgc cggcccccac cacctcagtg cgaggctggg
     2041 ccgcaggttt ccgggtggtc ttcacaattc cgcaatggcc atgcgacatg tactcgcaga
     2101 gacagacatc gccgagcacc accagatcag gtacctcgct cttgatggcc cgcgtggcct
     2161 tctgcactat gccgtcatcc gcccatgccc cggtggcgat ctcgtccttc ttctccggca
     2221 gcccaaacag gatgattcca cccaaaccca gcgcacgcgc ctcccgcgcc tccttcaccg
     2281 cctcgtcaac cgataggttg aaaaccccgg gcatggagcc gatctcacgc cgtattcctt
     2341 ctcccggaca gacaaagagc gggtagatga agttggtcgg ctcaagatga gtttcacgca
     2401 ccagggaacg caaaggctct gactggcgca tgcggcgcag gcgagtgact ggaaaaggca
     2461 tactcaaatt ttaccgtgta gctgggtcca cagtgcaggt atttgggctt atcggcgggc
     2521 gtctcgcaat gttagatacg tcacagacct ggatgcaccg atcaatgtag gcattgaagg
     2581 ttcctgctca actggctcca agaatatacg ccgagcctct tcttaagtcc tctccgcaag
     2641 ctttcgggag ctgctctgtg aaatcagagc tgtctcgggg caactctgct tcaggattcc
     2701 tcatcaaagc agttcgtcac ttatggccca cttatgcccc gtaaacctgc cgctcctaaa
     2761 gatgaccgcc tctggattgc cccgaatttc tcgttggcga atcgatcgct gaaagcccct
     2821 ccctttaagc cattgaaacg cgaatttcct ccgctcgccc cggagctgga taacgactcc
     2881 agtgtcgcgc gtttgctgga actggcagac attgctctcc aaaccggcaa ggacaaggaa
     2941 tagaaatttc gtgtcataga agctgtctgt ttaactgccg attacttcca gtgctttggc
     3001 cacgtcccgc ttcagatctt ccacgtcttc caatcccgta tagagccgca ccagccgcga
     3061 gccgtacgcc ggccgcttcg gagattgcag atcataggtc attgccaggc tgttcacacc
     3121 gccccagcta tagccgattt cgaatagctc cagcgaatca acgaacttca gcacctgctc
     3181 cttgctgaca ttgtcatgaa aaacgaacga gaacagtcct gacgatccgg taaagtctcg
     3241 tttccacagc tcgtgccccg ggcatgaggg caaggcagga tgcagaaccc gctcaacttg
     3301 cggccgggcg ctcagccatt ttgctaattc cagtgccgat tgctccacct gcttcaaccg
     3361 cactgccagc gttttcatgc cgcgcaaggc cagcgagcag tcgtccggcg aggcagcgca
     3421 gcccagtacc tggtaggtct ggccgataag atcgaacagc tttggatcac gcaccgtcaa
     3481 cgagcccagc agaacatcgc tatgtccgcc gatgtacttg gtcagcgcct gcagggttac
     3541 gtccacgtca tgagcaaacg cgtcaaagta cacgcctgac gcccacgtgt tgtcgagcac
     3601 aaccagagct ccacgcttgt gggccgccgc ggcgatagtg ggaacgtcct gaacttccat
     3661 cgtcactgag ccagggtttt cgcaccacac tacacgagtg ttcgatcgga attctttctc
     3721 aataccggct cctgcgtctg gcgggtaata gctcacttcc actccaaagc ggcgcagcac
     3781 gtcattcgca aacttgcggt tggggccata gatattttcg ggaatcagca cgtggtcgcc
     3841 ggcacgcatg agcgctagat gcaccaggga aatcgccccc tgtccgcctg gtgtaatgaa
     3901 ggtccggtag ccatgctcca gctcgcagac cctcaccgcc aattcaaggg tcgtcggcgt
     3961 gccatagaga ccataggtgt agccgtgatc gtaatggttc cagtgctcat cggcagcgcc
     4021 cgctttatcg aacagcacgg tcgaaccgcg gtagatcgga gttgccagcg accgaaaccc
     4081 ctggggaatc tccgcgtcag attgaatcag ctttgttttc caatccttgg acataatgtt
     4141 ttctttgcta gccattgttg caggatggtc tgaactccag cgcttccttc agcccgccgc
     4201 cttttcaccg gcctgctttt ttcttgggcc atgccagagc tcaccgctca cgcgtcgctc
     4261 ggtaagcaga cttgctgaga ccggggtgtc gcccgtctct ataaagcgtt cgtgattatc
     4321 ggccaggtca tccggcacgt agcggtaatt gaccatcatc ccaaacgatt cgcgtattcc
     4381 ataaccccgg gcattggcga atgggtccac cgcttccagg cgcgcaccgt tggaaaaatg
     4441 aaaattcgcc accgggtcca ctggcctgcc gttgcgcttc atttgggtga gatacgccac
     4501 cgccatccgt ctcagcggag ccgtaagcac cttctggtga gagaaagggt ctttcaggag
     4561 ttcaaagatc gcgtctgccg ggtcagagag tgcagcttca gtggccagct caccagcgaa
     4621 ctccttcagc agacgcccca gccgctcgcg agtgaacccg tccggattgt cggaggcgtt
     4681 cactgccttc gcgaaccctg gaagcgggga aagcgtgctg taaacgcgcc cccgcggcaa
     4741 ttctgcgcgc agttcgtcca ccacctgctt gatcaggaaa ttaccgaaag gaattccgcg
     4801 cagcccttcc aggcagttgt tgatggaata aaaaatcgca gtatcagctt cgtccgccgc
     4861 cagcaccggt gcattcacgt cgagcagagg atcaattgcc cgcgccagtc ccttcgtgag
     4921 tgccacttca ataaaaatca ccggctcgcc agggagcgaa ggatgaaaga aggcgaagca
     4981 ccgccggtca gctgccagcc ggcggtgtag gtccggccag ccgttgattt catggacgga
     5041 ctcatagtcg atgagctttt cgagagtgat ggctggcgtc tgccagttga tgcgctccat
     5101 ccgcaggaac ccacggttga accacgagcg gaacaggtgc ttaaggtctg aatccacggc
     5161 cgtgaggtcg gagtgcccgg gtagcaagcg ttgcaggtcg cggcgcatgc gcaccagcgt
     5221 ttctgttcct gaaggcccgg tgttgattcg gcggaagagt tcctggcgtg gaggttcggt
     5281 ggcggcagcc agcgcggcct cattgactgg cgttgcgccg cgcccgtagt tctcgattgc
     5341 cttctgaatg acttgtttgt ccgtgccgaa atcgtttgcc aggagctgaa aaaacttaag
     5401 ctgctgctcg ctgcccatct gcctgtattg ctcgatgata tgttgcgcca gcacggtctg
     5461 cgatgcttcg ccgcggtggg agagcagttc acggcagagc agctgcatgt tgttgccgcg
     5521 ctcgccgcgc agccgttgca gaaggttatt caggaattca ggcacaatca atgccttcct
     5581 tgaggggtgt gcgcaagcat tttatatcgg gagcggactc acccccattt gcggagtacg
     5641 gcatgcaatc tctccgtgaa ttcctcgcgc gacatgctat tgctgtgggg gctgtggccg
     5701 gcattgggaa tcagttgcac ctcagcctgc gggagttctt gccgcacgcg gtcaatctct
     5761 cctggttcgg tgcgcggatc gcccgcgccg tgcaggaccg ccactggtac ctcgcgcatt
     5821 tcggaaagcc tcccgtcata aacatctttc cggtcaggcg tggcagtccg cgcgatctcc
     5881 agccacgatt cgccgtcgcc gatgagcgct gcgcgccagt gctgttcgcc gtggtcgtgc
     5941 gccagcactg aggtgatctt ttcgccaaat gaatctggat ccctggccat ggctatgaag
     6001 aagtcgcgcg agtgcggctt ctcgcgatcg tagtggagcg cttccaggat gagcccttcg
     6061 atcttcactt ccggagactg cttcgccagc atggccatcc agcaggcgat cacggcgcca
     6121 tcactgtgtc cccataaaat gcagcgctga attgcgagcg ctttcaggaa cagcaacatc
     6181 tcatgcgcgg cgcgcggatg aagatcaaca ccgaagagcg ccggtttgct cgatcggcca
     6241 tagccggagc gatctggagc gatcagccgg actccgggaa gggatgtttg ctcgtttgaa
     6301 agggggtaaa tttcatatcc ccagccgccg tgaaggaaga taagcggcct ccccgctccg
     6361 aattcccggt aaaagatctc cgttggtccg cccgcaagcg gagagtggac aaggttggtg
     6421 gttggcaaac agcgattcta aaccaagcca gttaatcact tatgttcccg gcgcgaaaag
     6481 aatcacgcct gagcaaaaac cgtgacacca tcgcagcaag cagcagccag tgtcgcggtt
     6541 ccgccgcagc gctggacgcg cggttagggt ttttaattcg actctaatcc aacggcaaga
     6601 ttcggagcct accgtgaaga ttgactgttt cgatctgtag gaggtatcca tgaaacacgt
     6661 catccagttt tacgtgccca tgcattacgt gcctaaacag cgccgctggg tggcgccgga
     6721 tctgcgcggt aaagtcctgc aattccgcgc caagaagtcc gcgtaacttt tttcggtagc
     6781 gcgcgccggg ctcaagcctc tcctcgattt ttcctccgcc tctctgcgcc tgcatgatag
     6841 ttttctttca tgagcgtttc ctcgtccatt cctgttggc
//
LOCUS       DASQYP010000291         8226 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_120724, whole genome shotgun sequence.
ACCESSION   DASQYP010000291 DASQYP010000000
VERSION     DASQYP010000291.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 8226)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8226)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8226
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_120724"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1197
                     /locus_tag="VE783_09375"
     CDS             <1..1197
                     /locus_tag="VE783_09375"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HYX53653.1"
                     /translation="MVAAEIGLSLVLLVACGLMLKTLFALRHVPLGFRTDHVLVVEPK
                     LPDYKFRNVDVNQTVYTPLLDRIRQIHGVQAASFSTVMPLRNNFDMMFMLHGSRSNKT
                     TGENGAFKIEAKMKAVGRDLQKVLGFRMAEGRFFNEQDTPESEQVLVVNKAFAKLYAP
                     EGSISDNFSLSFGKNGHARVVGVIDDFHQVGVDKPAAPEIDLCADQMRAGDGLYQPTM
                     LAHADFAIRSSVPPQQLMADLRRVMVDLNPELQASEIMTMDQVVEDSLGSQLLAAHLL
                     EIFAGAALGVALAGLFGLLTYLVGQRTHELGIRLALGAQRETILAMILKQATVMLALG
                     AAMGIALAWFATRLLASFLFGVRAHDLWTIASVSLVLLISGMLAAYIPARRAAQVNPL
                     EALRAE"
     gene            1281..1802
                     /locus_tag="VE783_09380"
     CDS             1281..1802
                     /locus_tag="VE783_09380"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53654.1"
                     /translation="MEHKPFPPDATKPPQSRFPWPLIAILVAVVLLVITFSMAPKTNK
                     AATKAMDNSPVNNQEIQLSAITLAPQEVNNLATVDIYGQATNTGRQPVTNAIVSAEFD
                     DNAGKPILLQQQNMERVDSKGSDKAANPRELGNDPLKPAQSTGFRARFTDIPSTWNHK
                     PPRVTVSQVTIQK"
     gene            complement(1873..2328)
                     /locus_tag="VE783_09385"
     CDS             complement(1873..2328)
                     /locus_tag="VE783_09385"
                     /inference="COORDINATES: protein motif:HMM:TIGR00040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042578 - phosphoric ester hydrolase
                     activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase family protein"
                     /protein_id="HYX53655.1"
                     /translation="MIVGVISDTHGLLRPEAVELLRGSEHIIHAGDIGAPEIIPELEK
                     IARVTAIRGNVDTQSWARVFPETNVAELAGAMIYVIHDRNALDLNPKAAGFAAVISGH
                     SHKPGQEIKEGVLYFNPGSAGPRRFSLPISVGRLEIADGKIKGEILTIG"
     gene            complement(2580..3440)
                     /locus_tag="VE783_09390"
     CDS             complement(2580..3440)
                     /locus_tag="VE783_09390"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HYX53656.1"
                     /translation="MASATWTTATTLGRRNKLAGIGMVLVAVFVMFALFAPWIAPQDP
                     SRIELSTRLHGPSAAHWFGTDELGRDIFSRVIYGAQISMLVGSSVVAGSLLLGLIVGS
                     LAGYYGGAADKFFNVIVMNAFLSFPGILLAIAFVAFLGPGIFNLIFALCIGGWVGYAR
                     LVRGQVLAVKEREFVEAARALGASDWRIVTRHILPNVIQPVIVQAAIGMAGAVLAEAT
                     MSFLGLGVPPPTASWGSMLNDGRIHLFDAPHLVVFPALAVMLAVLSFNFIGDALRDYM
                     DPRSRIEAGL"
     gene            complement(3456..4589)
                     /gene="hisC"
                     /locus_tag="VE783_09395"
     CDS             complement(3456..4589)
                     /gene="hisC"
                     /locus_tag="VE783_09395"
                     /EC_number="2.6.1.9"
                     /inference="COORDINATES: protein motif:HMM:TIGR01141.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004400 - histidinol-phosphate
                     transaminase activity [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol-phosphate transaminase"
                     /protein_id="HYX53657.1"
                     /translation="MKKTVLDQVLPHIRSLAGYVPGKALRQAQRESGVTMIKMASNEN
                     PFGPSPRAVEAIRKVAGEVNFYPDNDASELREELAVRHGLAPEQIFLADGSLGLLDIL
                     ARTLLGPGLNCITSEKSFISYPIVTRAAGGELITTKMRNDGYDLDAIAAAITDNTRVV
                     ILANPNNPTGTMFDADATEKFLARVPDHVLVVLDEAYCDFGSYFAAKRGITYSRSFDF
                     VRQGRRNVIVLRTFSKAHGLAGIRIGYGCGDPELFQYFGRVRNSFSVSVVAEAAGLAA
                     IRDEGHIIRTVENNAAGAEWLMPHFAELGLRAVPTSTNFIYFEVDENAADFAKRMQTE
                     GIIVRSLTPWGIPNGIRVTIGTPEQNALFVRALKKVVRQAVAK"
     gene            complement(4666..6225)
                     /locus_tag="VE783_09400"
     CDS             complement(4666..6225)
                     /locus_tag="VE783_09400"
                     /inference="COORDINATES: protein motif:HMM:TIGR00093.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0001522 - pseudouridine synthesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pseudouridine synthase"
                     /protein_id="HYX53658.1"
                     /translation="MAAERLQKIIAAAGIASRRKAEELITGGRVTVNGQVVTELGSKA
                     DPATDHIKVDGKLLQGAERHIYLALHKPRGYVTTVTDPEGRPTVMDLVKHVGERVYPV
                     GRLDFNSEGLLILTNDGEFANFLTRADSHVPKTYLVKVAGQPQEEDVEKLRHGIRIGN
                     KPGESGPRSVRTAPAEVRLLREADNPWYEVTLIEGKNRQIRRMFEAIGHHVEKIKRVS
                     YGALKLDLEPGEFRELTTQEIAVLRRPPKQREGEAERPAAKIHARHIGKAALKKGPSQ
                     RQRVNRRFGDKGRERFQPEARDERRGAGERREFRSSTRPDGERREFRPSARPVDERRP
                     FAKPDGERRPPRRDERSRGGFAERGRSRPQRDDREQGRREFRGGRPFPANRDRRGPDR
                     EDREQGRREFQDRNTFSTRFDRGRPEREEGEGGERDFPRNDRRSGPASRSGKPAFSRS
                     SRPGSSRSGRPEQGQRRGSPGGSNRTGRGGGGFSGGRGASSDRGPKRGGKSPGNRNTR
                     RPGGRGGPRRP"
     gene            complement(6228..7217)
                     /gene="scpB"
                     /locus_tag="VE783_09405"
     CDS             complement(6228..7217)
                     /gene="scpB"
                     /locus_tag="VE783_09405"
                     /inference="COORDINATES: protein motif:HMM:TIGR00281.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0007059 - chromosome segregation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SMC-Scp complex subunit ScpB"
                     /protein_id="HYX53659.1"
                     /translation="MSIRAKLEALIYAAEEPIPLDQMAALLKEDLLALKEQPQPELHP
                     HPEQAEEHLGAVETDKPDETSPVGDAAAAAPSEQAQEAAAPKKARGNQKEKSEKVILR
                     ELLRPILQEVMAEFNREDHGIEIREVAGGYRMSTKPEHHDVVRAFAKSLKPPIRLSLQ
                     ALETLAVIAYKQPVTVPEISDIRGVDSSGVIGTLLERKLITTAGRKAVVGRPMLYKTT
                     KDFLMRFGLSDIGELPSLEEFEKLAAGELQEELFIGRDAAIADATGVPDMNNEEHSAE
                     QRGENADGGVEQLAEDKAEQPETVTEPTVSSDPRHNAADDQATDQVASESTGG"
     gene            complement(7404..>8226)
                     /locus_tag="VE783_09410"
     CDS             complement(7404..>8226)
                     /locus_tag="VE783_09410"
                     /inference="COORDINATES: protein motif:HMM:NF014654.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="segregation/condensation protein A"
                     /protein_id="HYX53660.1"
                     /translation="LYYVPTMTQTSNPAPTSEFPFAVTVGQIYDGPLDLLLDLIRKQD
                     IDIYDIPIARITAQYLAYVETLKHLDVDVAAEFIYMAALLIHIKSKMLLPRDPDAPPG
                     QEEDPREELVARLLEHEKFKNAAQMLFQKQQIEDAVVSNPSLKEFRDDEGTEPELAAD
                     VVDLVKTFQEILERARSRPVLQVNEESVTVGQMIEYFRRRLLMEDRPIKLKRLLQHVT
                     TRPALIASFLALLELVRLQAVLLRQDRVFGDILLKKHPMFDTIMAEGASVRDDWK"
BASE COUNT         1629 a         2569 c         2278 g         1750 t
ORIGIN      
        1 atggtcgcag ccgaaatcgg tctctctctg gtgctgctgg tggcctgcgg tctgatgctg
       61 aaaactttgt tcgcgctgcg ccacgtgccg ctcggtttcc gcaccgatca tgtgcttgtg
      121 gtggaaccca aactgccgga ttacaaattc cgcaacgtgg acgtgaacca gacggtttac
      181 acgcctctac tcgatcgcat tcgccagatt catggcgtgc aggcagcaag cttctctacg
      241 gtgatgccgc tgcgcaacaa ctttgacatg atgttcatgc tgcacggctc gcggtccaac
      301 aagaccacgg gtgaaaatgg cgcgttcaag attgaagcga aaatgaaagc cgtgggccgg
      361 gatcttcaga aagtgctcgg ctttcgcatg gcagaagggc gtttcttcaa tgagcaggac
      421 acccccgaat cggagcaggt gctggttgtg aacaaggcgt tcgccaagct atatgcgccg
      481 gaaggtagta tcagcgacaa tttctcgctc agctttggga aaaacggcca cgcgcgcgtg
      541 gtcggcgtaa tcgatgactt tcatcaagtc ggggtagata aacccgctgc gccggaaatc
      601 gatctctgcg ccgatcagat gcgcgccggc gacgggcttt accagcctac gatgctggcc
      661 catgctgact ttgccatccg cagcagcgtg cctccccagc aactcatggc cgatcttcgc
      721 cgcgtgatgg ttgatctcaa tcccgagttg caggccagcg agatcatgac catggaccag
      781 gtggtggaag attcgctcgg cagccagctg cttgcggcgc acctgctgga gatctttgcc
      841 ggtgcggcgc tcggagtcgc tctggccgga ctcttcggac tgctcaccta tctggtagga
      901 cagcgtaccc acgaactcgg aatccggctt gctcttggtg cgcagcgcga aacgatcctg
      961 gccatgatcc tgaagcaggc caccgtgatg ctggctctgg gtgcagctat gggcattgcc
     1021 ttggcatggt ttgccactcg cctgctggcc agcttccttt ttggggtaag agcccatgac
     1081 ctctggacca tcgcatcggt cagcctggtg ctgctgattt ccggcatgct cgccgcgtac
     1141 attcctgctc gaagagcagc acaggtgaat cctttggagg cactcagggc cgagtagcgc
     1201 agaacgcaaa catccacggc aactaactcc tcatcagggg acatcttttt acttagtccc
     1261 ctgaaaactg aggagccctt atggagcaca agccttttcc gccggacgca accaaaccac
     1321 cgcagagccg ctttccctgg ccgctgatcg ccatcctggt tgctgttgtt ctgctggtga
     1381 tcaccttcag catggccccg aagaccaaca aggcagccac caaagccatg gacaactcac
     1441 cggtcaacaa tcaggagata cagctttcgg ccatcacgct ggcgccgcag gaagtgaaca
     1501 atctggcgac ggtagatatc tacggtcaag ccaccaacac cggccgtcag ccggtcacca
     1561 acgccatcgt ctcagcggag ttcgatgaca acgcaggaaa gccgattctg ctgcaacagc
     1621 aaaacatgga gcgcgtggac tccaaaggct ctgacaaggc tgcgaacccg cgcgaactcg
     1681 gcaacgatcc gctcaagccg gcgcagagca ccggattccg cgcgcggttc acagatattc
     1741 catccacctg gaaccacaag ccgccgcgcg tgaccgtatc ccaggtgacc attcagaagt
     1801 agacgtaagc tttgttggcc ggcgatgtga atcggtgcct ccgcgagcgg gaagtaggcg
     1861 aaccgggaat ggtcagccga ttgtcaggat ctcgcccttg atcttgccgt cagcgatctc
     1921 aagccggcca accgaaatcg gcaaactgaa gcgccgaggt ccggcgctgc cgggattgaa
     1981 gtagagaaca ccctccttga tctcctgtcc cggcttgtgc gagtgcccgc tgatcaccgc
     2041 cgcaaacccc gcagctttgg gattgaggtc aagggcgttg cggtcatgga tcacatagat
     2101 cattgctccg gccagttcgg cgacgttggt ttcgggaaaa actcgcgccc agctttgcgt
     2161 gtccacgtta ccgcgaatcg ctgtgacacg tgcgatcttt tccagttcgg gaatgatctc
     2221 cggtgcgcct atgtcaccag catgaatgat gtgctctgac ccgcgcagca actcaacagc
     2281 ttccggacga agcagcccgt gcgtatcaga gattacacca acaatcattc ggctcacccc
     2341 gataattcga acctgtaatt tgcaagagct gccaacggta gtcacgatgt actacaacgc
     2401 ttccatgctc cagcgccgta ggcgcgacat attttagccc agtccgtttc cgaggcgcgc
     2461 tctgcgcgct gaggaataag ggctgggtaa ggtgctcatc gtgtccctcc ttacaccgta
     2521 ggccgtcgcg cagtgaagcg gagcgacaat aaaaagaaca tcgcgattac ggcgatcttc
     2581 tataagcctg cctcaatgcg cgaacgcgga tccatgtaat cccgcagcgc atcgccaatg
     2641 aaattaaacg agagcactgc cagcatcacg gccagagcag ggaagaccac cagatgcggc
     2701 gcgtcgaaca gatgaatgcg tccgtcgttc aacatcgatc cccaactcgc cgttggcgga
     2761 ggaactccga gcccaagaaa actcatggtc gcctcggcca gaaccgctcc tgccatgccg
     2821 attgcagcct gcacaatgac cggctggatt acatttggca gtatatggcg cgtgacaatt
     2881 cgccagtcgc tcgcgcccag cgcgcgtgca gcctccacga actcgcgctc tttcaccgcg
     2941 agcacctgac cgcgaaccag gcgcgcgtat ccaacccatc cgccgatgca cagagcaaag
     3001 atcaggttga aaattccggg accgagaaac gccacaaatg caatcgccag cagaattccc
     3061 ggaaatgaca gaaacgcatt catcacgatt acattgaaga acttgtccgc tgcgccgcca
     3121 tagtagcccg cgagggagcc aacaatgagg ccgagcagca gcgaacccgc aaccacgctg
     3181 ctgcccacca gcatggagat ttgtgcgccg tagattacgc gagagaagat gtcgcgccca
     3241 agttcgtcag tgccgaacca gtgggccgcg ctcggcccgt gtagccgcgt gctcaactcg
     3301 attctgctgg gatcctgcgg cgcaatccat ggcgcgaaca gcgcgaacat cacaaaaacc
     3361 gcaaccagaa ccatgccaat cccggcgagt ttgttgcgcc gccccagagt ggtcgcggtg
     3421 gtccaggtcg cagaagccat aggtgtaaat gtcagctact ttgccactgc ttgccgcacc
     3481 actttcttca gtgcgcgcac aaacagcgca ttctgctccg gcgtgccaat ggtcacacgg
     3541 attccgttcg gaatccccca gggcgtgagc gaacgcacga tgatgccctc agtctgcatg
     3601 cgtttggcga agtcggcggc gttttcgtcc acttcaaaat agatgaagtt ggtactggtc
     3661 ggcactgcgc gcaatccaag ctcagcgaag tgtggcataa gccattctgc tccggcagcg
     3721 ttgttctcga ctgtccgtat gatgtggcct tcatcgcgaa ttgcggccag ccctgccgct
     3781 tccgcaacca ctgataccga aaaagaattt cgcacccggc cgaaatactg gaacagctcc
     3841 ggatccccgc atccgtagcc gatgcgaatg ccggccagac cgtgggcttt tgagaaagta
     3901 cgcagcacaa tcacgttcct gcggccctga cggacaaaat caaacgatcg cgagtatgta
     3961 atcccgcgct tcgcggcaaa gtagctgccg aaatcgcaat aggcttcatc cagcaccacc
     4021 agcacatgat caggcacacg cgccaggaac ttctccgttg catccgcgtc gaacattgtc
     4081 cctgtaggat tgttcgggtt cgccagtatg accacgcgcg tgttgtcggt gatcgcggca
     4141 gcaatcgcat caaggtcgta tccgtcgttg cgcatctttg tcgtgatcag ctcgcccccg
     4201 gcagcccgcg tcacaatcgg atagctgata aacgactttt cgctggtgat gcagttcaat
     4261 cccggcccaa gcagcgttcg cgcaagaatg tccagcaagc caagcgagcc atcggccagg
     4321 aaaatttgtt ctggagcaag gccgtgtcgt accgcaagtt cttcgcgcag ctcgcttgcg
     4381 tcattatcag gatagaagtt gacttcaccg gcgactttgc gaatcgcctc caccgcgcgt
     4441 ggcgacggcc cgaacgggtt ctcattcgat gccatcttga tcatggtcac gccggattcg
     4501 cgctgcgcct ggcgcagggc cttcccggga acgtagccgg ccagcgagcg aatgtgtggg
     4561 aggacctgat cgagaacggt ttttttcatc tcaggattcg ggtggtacac gcctttttat
     4621 cacgaagcta agccgaactg ccaactcgcg tcacagccga aacgatcacg gacggcgtgg
     4681 tccgccacgt ccgcctggcc ggcgagtatt gcggttcccc ggtgacttac ctccgcgttt
     4741 tgggccgcga tcgctgcttg cgccccggcc gccgctgaag cctccgccgc ctcgcccggt
     4801 gcgattcgat ccacccgggg aaccacggcg ctggccctgc tccggtcttc cgctgcgcga
     4861 ggaaccgggc cgactgctgc gtgaaaatgc gggtttgccg ctgcgtgaag cgggaccact
     4921 acggcggtca ttgcgcggaa aatcgcgctc gcccccttct ccttcttccc gctccgggcg
     4981 accgcgatca aatctggtag agaaggtatt cctgtcctga aattcgcgcc ggccctgttc
     5041 gcgatcctca cggtcaggac cgcggcgatc gcgattggcg ggaaatggtc ttccgccgcg
     5101 gaactcacgc ctgccttgct cgcgatcatc tctctgaggc cgcgatctgc ctcgctcagc
     5161 gaacccgcct cgggaacgct catcgcgccg cggcggcctt cgctcgccat ctggtttggc
     5221 gaacggcctg cgttcgtcga ctggtctggc ggacggacgg aattcccggc gctccccatc
     5281 cggtcgcgtg gaggaacgga attcgcggcg ctcgccggct ccgcgcctct cgtcgcgggc
     5341 ctccggctgg aatcgctcac ggcccttatc gccaaagcga cggttaaccc gctgcctctg
     5401 cgaaggtccc ttcttcaacg ccgctttgcc aatgtgccgc gcatggatct ttgccgcggg
     5461 ccgttcagct tcgccttcgc gctgcttcgg cggccgccgt agcaccgcaa tttcctgcgt
     5521 cgtcagctcg cggaattcac ccggttcaag atcaagcttg agcgcaccgt aagaaacgcg
     5581 tttgatcttc tccacatggt ggccaatggc ctcaaacatc ctgcggatct gccggttctt
     5641 gccttcgatc agcgtgactt cataccaggg attgtcagct tcacgcagca gccgcacttc
     5701 agccggcgcc gtacgcacgg accgcggtcc gctttctcca ggcttgttgc ctatgcgtat
     5761 cccgtggcgc agcttctcca catcctcttc ctgcggctgc cctgcgactt tcaccagata
     5821 ggtcttcggg acatgcgagt cagcgcgcgt gagaaagttg gcgaactcgc cgtcattggt
     5881 gaggatcagc aggccttcac tattgaagtc aagacgcccc accggataaa cgcgctctcc
     5941 cacgtgtttt accaaatcca tcaccgtggg acggccttcc ggatcagtca cagtggtcac
     6001 gtaaccgcgc ggcttatgga gcgcgagata aatgtggcgc tctgcccctt gcaaaagctt
     6061 gccgtctacc ttgatgtggt cagttgcagg atcggccttg ctgcccagtt cggtcacaac
     6121 ctggccgttt acggtgacgc gaccgcctgt gatcagctct tccgccttgc ggcgcgaagc
     6181 gatccccgcc gcggcgatga ttttttgcag gcgttccgca gccaagctca acctcctgtg
     6241 ctttccgacg ccacctggtc ggtggcctga tcgtctgccg cgttgtgccg cgggtcagac
     6301 gataccgtag gctcggtcac agtctcaggc tgctcggctt tatcttcagc aagctgctcc
     6361 acgccgccgt cggcgttctc tccgcgctgt tctgctgagt gctcttcgtt gttcatgtca
     6421 ggaactcccg ttgcatcggc aatggctgcg tcgcggccaa taaagagttc ctcctgcagc
     6481 tcgcctgcag cgagtttttc aaattcctca aggctgggca gctcgccgat gtcacttaga
     6541 ccgaagcgca tcaggaagtc tttggttgtc ttgtaaagca tcggccgtcc gaccaccgcc
     6601 ttgcggcccg ccgtggtgat gagcttgcgt tccagcagag taccaatcac gccgctggag
     6661 tcgactccgc gaatgtcact gatttccggc actgtgaccg gctgcttgta cgcgatgacc
     6721 gccagcgtct ccagcgcctg gagtgaaagc cggatcggcg gcttcaggct cttggcgaac
     6781 gcgcgcacca catcgtggtg ctccggcttg gtggacatcc tgtatccgcc ggccacctca
     6841 cggatctcaa tgccatgatc ttcgcggttg aactcggcca ttacctcttg caggatgggc
     6901 cgcagcagct cacgcagaat taccttctcc gacttttcct tctgattgcc gcgggccttt
     6961 ttaggtgcag cagcctcttg cgcttgttct gacggcgcag ccgctgccgc atcgccgacc
     7021 ggagaggttt cgtcgggctt gtccgtctct accgcgccca ggtgttcttc ggcctgctca
     7081 ggatgcggat gcaactcagg ctgcggctgc tctttgagtg ccagcaggtc ttctttgagg
     7141 agcgccgcca tctgatcgag cgggatcggc tcctcagcgg cgtaaatcag ggcttcgagt
     7201 ttggcacgga tggacatgat gaagtaatta gcaattagta attggcaaat agccacactt
     7261 caattgcgtg ctcttgattt ctcctcttcc acattctcgc gtcacttcaa taccgtatgc
     7321 ctgactctgt ctggcctaac ggccaattga taattgccaa ttgctatttt ctggccaatt
     7381 actaattgct atttgctaat tactcatttc caatcatcgc gcacacttgc gccttccgcc
     7441 atgatggtgt caaacatggg atgttttttg agcaggatat cgccaaacac acggtcctgg
     7501 cgcagcagca ccgcctggag acgcacaagc tcgagcagcg caaggaacga cgcgatcagc
     7561 gcgggccgtg tggtcacatg ctgcagcagg cgcttcagtt tgatcgggcg atcctccatc
     7621 agcagccgcc ggcgaaaata ttcaatcatc tggccgaccg tcacgctttc ttcattcacc
     7681 tgcagcaccg gacgcgaccg tgctcgctcc agaatttcct ggaaggtctt caccaggtcc
     7741 accacgtcag cggcaagctc cggctcggtc ccttcatcgt ccctgaattc tttcaacgaa
     7801 ggattgctca ccaccgcatc ctcaatctgc tgtttttgaa acagcatctg ggcggcgttc
     7861 ttaaacttct cgtgttccag cagtcgcgct accagctctt cgcgcggatc ttcttcctgc
     7921 cccggaggcg catccgggtc gcgcggcagc agcatcttgc tcttgatgtg gatcagcagc
     7981 gccgccatat aaatgaattc ggccgccacg tccacgtcca gatgcttgag cgtttccacg
     8041 tatgccagat attgcgcggt gatgcgcgca atcgggatgt cgtaaatatc aatgtcctgc
     8101 ttgcggataa ggtccagcag caggtccagc gggccatcat aaatctggcc aactgtcact
     8161 gcgaaaggga attcgctcgt gggggccgga ttggaggtct gcgtcatcgt gggtacgtaa
     8221 tacaac
//
LOCUS       DASQYP010000292         4954 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_138725, whole genome shotgun sequence.
ACCESSION   DASQYP010000292 DASQYP010000000
VERSION     DASQYP010000292.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 4954)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4954)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4954
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_138725"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2036
                     /locus_tag="VE783_09415"
     CDS             <1..2036
                     /locus_tag="VE783_09415"
                     /inference="COORDINATES: protein motif:HMM:NF019351.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005507 - copper ion binding [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="multicopper oxidase domain-containing protein"
                     /protein_id="HYX53661.1"
                     /translation="ALAPIGGLNPFVPSAHGDSLTGFPPSPLFGVAKFSTPLPRFDVL
                     ARNPVASLNPAPTAEANTTLQPVDPALGGGFGPIEGRPPGGIWAHQLFTQLPPQVAIE
                     VSQAQAQTNTVYNPAVDSQFNSGIDPTSPIPLKFHPSFPTQAPNSVWTFNGTIPPKLV
                     IGRYGEPILTRHHNQLPADVRQNNGFGRHTISTHEHNGHHGAENDGFTGAYFYPGQFY
                     DYHWPIVLAGRNTINTNATDPRAGSPADNGGINNVPGDWRETMSTHWFHDHMFSFTSQ
                     NVYKGNAAMFNIYSSLDRGNEGLNDGVNLRLPSGTAKSFANLEYDVNLMLADKAFDSH
                     GQLIMDIFNFDGFLGDVMTVNLTFCPFFEVERRKYRFRILNASVSRFFKVALSDGSAM
                     NQIANDGNLLPTPVTLTQLDEQGIAERYDIVIDFSRYSIGSKVWMVNLCEHEDGKKPA
                     ADLTLSQALSGSSSDPCVGKFLEFRVVRDPAQPDQSQVLSTLIPNPDLSHIPVARTRT
                     FEFGSGGQTTNDPVTSFTGPWGIRTDGADKSLNADFGRVSAAPSFGTRETWTLINGGG
                     GWDHPIHIHFEEGQILARNGSASQVPAWEKGRKDVYRLRPGGSVTLTMQFRDWGGMFM
                     EHCHNTVHEDNAMLLRWEIDNGGAPFLRPLPTPIPSPQGVTFEQPDEVLPTAF"
     gene            complement(2141..2389)
                     /locus_tag="VE783_09420"
     CDS             complement(2141..2389)
                     /locus_tag="VE783_09420"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53662.1"
                     /translation="MTTLREYSCEICGTVSSNPTHWFVIQCGNANLTVIKWNTDVANE
                     LGSRHFCGEAHAQVYISRWFESACTPPRPDFLRSSAAK"
     gene            2862..>4954
                     /locus_tag="VE783_09425"
     CDS             2862..>4954
                     /locus_tag="VE783_09425"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53663.1"
                     /translation="MAQVNSRSFVYWCGLLVISFILLVAQAHTQTGDQGWPRSIESGG
                     LRIDVYQPQVDKWANGKLQDRTAIAVTDKNTGESTYGTAWLSGRTTLDQEKRLVTLYD
                     IDVKNVTFPSAGTREAAYAKATKDVLERWTVTIALDRLLADIAINESEQKSGGDEFNT
                     KPPKIFVRENSAVLILIDGDPVLENIPNSKFMRVVNSPSMIAFDPFSGSYFLRGEGYW
                     MSAANIEGPWSSTSDTAVLAALLSSDEAKASAKVGEATPEIIVSTEPAELIEIKGEPQ
                     FSPIEGTRLLYVINTDGDVFLNLQERHYYVLLAGRWFTAPTLAGPWEFVPGSNLPLDF
                     ARIPGGHSKTAVLASIPGTPEARDAVVAAQVPQTATVDRRTATFSATYDGDPRFKKIE
                     NTEVSYAVNSSDDVLFVHGRYYAVSNGVWFVADDPRGPWAVADFVPPEIYSIPPTVPV
                     YHVKYVYVYDSTPEYVYVGYTPGYFGSFIWNGVVVYGTGYYYPYWYGNYYLGWPWTWG
                     FGFYYGYWGGGYYWRPWYPYPWYWHHWGGWDHHYPYYSWNRTLYNRSVAGTMNPHSFH
                     GGSVYDRWRTAGVVSRHPVPLRSPATITPRPQLGARAGTFNTGGTRIGPYGTGTGRPG
                     RPGGTPRWNGPNIGTTIPRTTTRDLYSDRNGQIYSHQNNGWYRNDGRNWEHVQPRTTI
                     PGTPRGGQPGTFTPP"
BASE COUNT         1050 a         1470 c         1405 g         1029 t
ORIGIN      
        1 gagcccttgc tcccatcggc gggctgaatc cttttgtgcc cagcgcgcac ggtgattcgc
       61 tcaccggctt tccgcccagc ccgctgttcg gagtggccaa gttcagcacg ccgctgccgc
      121 gctttgacgt gctggcacgc aatcctgtgg cgagcctgaa ccccgcaccg accgctgaag
      181 caaataccac gctgcaaccc gtggatccgg cgctgggtgg aggctttggg ccaatagaag
      241 gccgcccgcc gggcggaatc tgggcgcacc agttgttcac gcagcttccg ccgcaggtgg
      301 caattgaagt ttcacaggcg caggcacaga ccaacaccgt gtacaacccg gcggtggatt
      361 cacagttcaa ctccggcatt gatcccacgt cgccgatccc gctcaagttt catccttcgt
      421 ttcccacgca agcgcccaat tcggtatgga ccttcaacgg cactattccg cccaagctcg
      481 tgatcgggcg ctacggtgaa ccaatcctaa cccgccacca caaccagctg cctgcagacg
      541 tgaggcagaa caacggtttt ggccggcaca ccatctccac gcatgaacac aacggacatc
      601 acggcgcgga gaatgacggt ttcaccggag cctattttta tcccggacag ttctatgact
      661 atcactggcc aatcgtgctc gccgggcgca ataccatcaa taccaatgcg accgatccgc
      721 gtgccggaag cccggccgac aatggaggaa tcaacaatgt gccgggtgac tggcgcgaaa
      781 ccatgtccac gcactggttc cacgatcaca tgttcagctt cacctcgcaa aacgtctaca
      841 agggtaatgc tgctatgttc aacatttaca gttcgctgga ccgcggcaat gaaggactga
      901 atgacggcgt taacctgcgg ctgccatcag gcactgccaa atcctttgcc aacctggagt
      961 acgacgtgaa cctgatgctg gccgacaaag cgtttgattc tcacggtcag ctcatcatgg
     1021 atatcttcaa cttcgacggc ttcctgggcg atgtgatgac cgtgaacctt acgttctgcc
     1081 cgttctttga agtggagcgg cggaagtatc gcttccgcat tctcaatgcc agcgtttccc
     1141 gtttcttcaa ggttgcgctg agcgacggtt ccgcaatgaa ccagatcgcc aacgacggga
     1201 atctgctgcc cacgcccgtg acgctcacac agcttgacga gcaaggcatc gcggagcgct
     1261 atgacattgt gatcgatttc tcgcgctact cgatcggctc caaagtctgg atggtgaacc
     1321 tttgcgagca cgaggacggc aaaaagccgg ccgccgacct aacgctttcg caggcgctct
     1381 ccgggagctc gagtgatccg tgcgtaggca agttcctgga gtttcgcgtc gtacgcgacc
     1441 ctgcgcagcc agaccaaagc caggtactct ctacgctcat ccctaatccc gatctcagtc
     1501 atatccctgt ggcgcggaca cgtacgtttg agttcggctc gggtgggcaa acgacgaatg
     1561 atcccgtgac cagctttacc ggtccgtggg gtattcgcac tgatggcgca gacaaatcat
     1621 tgaatgcgga tttcggccgc gtctccgccg cgcccagctt cggcacccgc gagacgtgga
     1681 cgctcatcaa cggtggcggc gggtgggacc acccgatcca catccacttt gaagaaggtc
     1741 agattctggc ccgcaacggc agcgcttcac aggtaccggc atgggagaaa ggccgtaaag
     1801 acgtttaccg tttacgcccc ggcggcagcg tgactcttac catgcagttc cgcgactggg
     1861 gcggcatgtt catggagcat tgccacaaca ctgtgcatga agataacgcg atgcttctgc
     1921 gctgggaaat tgacaatggc ggcgcgcctt tcctgcgacc attgccaacg cctatccctt
     1981 cgccgcaagg agtaacgttt gaacagccgg acgaggtact gcccacagct ttctagcgca
     2041 gaaggttaac gcccaatccc gatggaccgc tgcaacgaag ggtccatcgg gggtttttgg
     2101 gaggttacag cgagttcaaa aaacgcaagc agcgcgacgc tcacttggct gcggatgatc
     2161 gcaggaaatc cggccgaggc ggcgtgcagg cggattcaaa ccaccggctg atgtaaacct
     2221 gcgcgtgcgc ctctccgcaa aagtgacgcg agcccagttc gttggcaacg tcagtgttcc
     2281 acttgatcac ggtgagatta gcattgccgc actggataac gaaccagtgc gtggggttgc
     2341 tgctcacggt tccgcagatt tcacacgagt attcgcgtag cgtcgtcata cgcggatatt
     2401 ctataagacc tccagtcccc aaggctgctg cgaaggccgg ggagtctttc cattttgccc
     2461 ctgaaggctc gctgcgtgcg gtcgcccaac atgacaaaac ttaacagcgg cgtactttcc
     2521 cgtgacctca atcacagcct gtagattgcg gcgaacctat cctttatatg gaggaagact
     2581 aacgtaatgc attcgcttgg gagagtgtcg accagcgagg tgtgggccgc aatccggtat
     2641 cttgatcgga tgggccgcag ggtgacggac ccgtatcgcc gttctcgctt tgggtgagtg
     2701 ccacaatttt gatctcgtca gcgctcctca tggtgtttgg agtcgcagta cagcacctgc
     2761 ccgccacgat ctgccatctt cactgacgct cctcgcgttt tcccagctcg ccttccttgc
     2821 gaaccggcat tcgcccccgg gatgcgcgtt ggaggtgacg tatggctcaa gtcaattcaa
     2881 ggagctttgt ttactggtgt gggctgcttg tcatcagctt catcctgctc gttgcgcagg
     2941 cacacactca aaccggagac cagggctggc cgcgcagtat tgaatccggc ggacttcgga
     3001 ttgacgtcta ccagccgcaa gtagataaat gggcgaacgg caaactgcag gaccggacgg
     3061 cgattgccgt caccgacaag aacacaggag aatccaccta cggtactgcg tggctctctg
     3121 gccgcactac tctggaccag gaaaagaggc tggtcacttt gtatgacatc gacgtaaaga
     3181 acgtcacgtt tccttccgca ggtacgcgcg aagctgcgta cgccaaggcc accaaggatg
     3241 tgctggagcg gtggactgtg acaatcgctc tcgaccggct gctggccgac atcgccatca
     3301 acgaaagcga gcagaaatcc ggcggcgacg agttcaacac aaaaccaccg aaaatctttg
     3361 tgcgcgaaaa ttccgccgtc ctcatcctga ttgacggcga cccggtgttg gagaacattc
     3421 cgaactcgaa gttcatgcgc gtggtgaact cgcccagcat gatcgccttc gatccctttt
     3481 ccggaagcta cttccttcgc ggtgagggct actggatgag cgctgccaat atcgaggggc
     3541 catggagcag cacctctgac accgctgtac tcgccgcgct gctgagttcc gatgaagcca
     3601 aggcgtcggc gaaggttggg gaagccacgc cggagattat cgtcagcact gaaccggcgg
     3661 agctgatcga gatcaaaggc gagccgcagt tctctccgat agaaggcacg cggctcctgt
     3721 acgtgatcaa tacagacggc gatgtctttc ttaacctgca agagcgccat tactacgtgc
     3781 tgctcgcggg ccgctggttt actgctccta cgcttgccgg accgtgggag ttcgtgcccg
     3841 gcagcaacct gccactggat ttcgctcgca tcccgggcgg acactccaaa accgcggtgc
     3901 tggccagcat cccaggaaca ccggaagcgc gcgatgcggt ggtagctgcg caggtgccgc
     3961 agacggcaac tgtagatcga aggacggcta cattttccgc aacgtacgac ggcgacccca
     4021 ggttcaaaaa gattgaaaac actgaggtct catacgcggt gaactcttct gacgacgtac
     4081 tcttcgtgca cggccgatat tacgccgtga gcaacggcgt gtggttcgtg gctgatgatc
     4141 cgcggggacc gtgggccgta gctgactttg tgccgccgga aatttactcc attccgccga
     4201 ctgtcccggt ctatcacgtg aaatatgtct atgtgtacga ttcaactcct gaatatgttt
     4261 acgttggcta cacgccagga tactttgggt cgttcatctg gaacggggtg gtagtttacg
     4321 ggaccggtta ttactatcca tactggtacg gtaactatta tctgggatgg ccctggacgt
     4381 ggggctttgg tttttactat ggatattggg gcggcggtta ctactggcgt ccgtggtatc
     4441 catatccatg gtactggcat cactggggcg gatgggacca tcattatcct tattattcct
     4501 ggaaccgcac tctctacaac cgctcggtcg caggaaccat gaatccgcat agcttccacg
     4561 gcggatccgt ttatgaccgc tggcggaccg cgggcgtcgt gagccggcat ccggttccgt
     4621 tgcgatcgcc ggcaacgatt actcctcgcc cgcagcttgg cgcgcgcgct ggaacattca
     4681 acacgggcgg gacgcgaatt ggcccttacg ggactggcac cggaaggccg gggcggccgg
     4741 gaggaactcc gcgatggaac ggtccaaaca taggcacaac aatcccaaga acgacaacgc
     4801 gcgatctcta ttctgatcgc aatggccaga tttattcgca ccagaacaac ggctggtatc
     4861 gcaatgacgg acggaattgg gaacatgtgc agccaaggac taccataccg ggcactccgc
     4921 gcggtggtca gccaggcacg tttactccgc caag
//
LOCUS       DASQYP010000293         2967 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_231773, whole genome shotgun sequence.
ACCESSION   DASQYP010000293 DASQYP010000000
VERSION     DASQYP010000293.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 2967)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2967)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2967
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_231773"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1724)
                     /locus_tag="VE783_09430"
     CDS             complement(<1..1724)
                     /locus_tag="VE783_09430"
                     /inference="COORDINATES: protein motif:HMM:NF023418.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3488 and transglutaminase-like
                     domain-containing protein"
                     /protein_id="HYX53664.1"
                     /translation="MPSQVLTHPAERTGGAERFFQWSLYLLLVTGFIALLGTNKLDPP
                     SLILVVPALLVRGWLLLLRKEISISERWTSYLTLVYFVFYLLDYLYISQSFIGATVHM
                     VLFTMVVKIFSVRRDRDLVYLAILAFLMLLAAAVLTVDTLFLFTFALFMLVAIATFVS
                     MEMRRSEKEGLVVEVPERLASRFQGSLAAIAGLLGILTIAGAAVLFFIIPRLNSGAFV
                     KSWGNETSITTGFSQDVRLGGIGQIQQSNAPVMHVKVLWGRLPADPKWRGLSLANFDG
                     QRWWNPTEEHRFYGMPAGSLDVSQAFTVPPESGQPPRRRISTLGYKVVMEPLGLDLFF
                     LAPAPMKISGDYRVVELMADGAVYNRAPAVSESGFTEPQPIGAYTAESDTRDPEPLVR
                     DSRSRRYPAHIENVYLELPRLDPRIPKLAEEITADAPSNYAKARTIDDYLHSNFGYTL
                     QLPGNRPRDPLAYFLFERKKGHCEYFASSMTIMLRTLGIPARVVNGFRGGEYNDLTGS
                     YIIRQRDAHSWVEAYFPEAGWVTFDPTPASPSGPQDTRWARLSLYMDALGEMWREWII
                     NYDFSHQVR"
     gene            1815..1912
                     /gene="ffs"
                     /locus_tag="VE783_09435"
     ncRNA           1815..1912
                     /ncRNA_class="SRP_RNA"
                     /gene="ffs"
                     /locus_tag="VE783_09435"
                     /product="signal recognition particle sRNA small type"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00169"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00169"
     gene            2039..>2967
                     /locus_tag="VE783_09440"
     CDS             2039..>2967
                     /locus_tag="VE783_09440"
                     /EC_number="2.3.1.180"
                     /inference="COORDINATES: protein motif:HMM:TIGR00747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004315 - 3-oxoacyl-[acyl-carrier-protein]
                     synthase activity [Evidence IEA];
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0033818 -
                     beta-ketoacyl-acyl-carrier-protein synthase III activity
                     [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase III"
                     /protein_id="HYX53665.1"
                     /translation="MANLVRAKISALGTYVPPKLLTNDDLEKMVETTNEWILERTGIR
                     QRHIVEKGVPTSHLATEAANRALAERGIPATDVEAIFLGTVTPDMLFPSTACLVQDRI
                     GAKGAWGYDISAACSGFVYALQTGVKFVESGAHKRVLVIGADVMSSIIDYTDRATCVI
                     FGDGAGAVLVEPATDENYCIDFLHEVDGSGGCYLRMPGGGSLNPSTCETVQKKMHYVH
                     QDGQAVFKYAVRKMAEASANVLERNGFKGDDVALFVPHQANKRIIMSAADRLGLKEDR
                     VIINIDEFGNTTAGTIPLALESARQQGRLKKGDL"
BASE COUNT          633 a          854 c          922 g          558 t
ORIGIN      
        1 cggacctgat ggctgaagtc gtagttgatg atccattcgc gccacatctc gccgagcgcg
       61 tccatataga gcgaaagccg ggcccagcgc gtatcctgcg ggccagaggg tgaggcgggc
      121 gtgggatcaa aggtgaccca gccggcttcc gggaagtagg cttccaccca ggaatgcgcg
      181 tctctctggc ggatgatgta gctgccggtg aggtcgttgt attctccgcc gcggaacccg
      241 ttgaccacgc gcgcgggaat cccgagggtg cgcagcatga tcgtcatgga cgaggcaaag
      301 tattcgcaat ggcctttctt gcgctcaaag aggaaatagg ccaatgggtc acgcggacgg
      361 ttgccgggca gttgcagcgt atagccgaag ttggagtgca gatagtcgtc aatggtgcgc
      421 gccttggcgt agttggaagg cgcgtccgcc gtaatctctt cggcgagctt tgggatgcgc
      481 ggatcgagcc ggggcaactc cagatacaca ttctcaatgt gcgccggata tctgcgcgaa
      541 cgtgaatcgc ggacaagagg ttccgggtcg cgggtatcgg attcggcggt ataggcgccg
      601 atcggctgcg gctccgtgaa cccagactcg ctgaccgccg gggccctgtt gtaaaccgcg
      661 ccgtcagcca tgagttccac cacgcggtag tcgccggaga tcttcatggg agccggagcc
      721 aggaagaaaa gatccagccc caatggctcc atgactactt tgtatcccag cgtggagatg
      781 cggcgccgcg gcggttggcc ggattccgga ggaacagtga atgcctgtga gacgtccaga
      841 gaaccggcgg gcatgccata aaaacgatgc tcttccgtgg gattccacca gcgttgcccg
      901 tcgaagttgg ccagcgagag gccgcgccat ttgggatcgg ccggcagcct gccccagagc
      961 accttcacgt gcatcacggg cgcgttggac tgctgtatct ggccgatgcc gccaaggcgc
     1021 acgtcctggc tgaagccggt ggtaatgctg gtttcattcc cccagctttt tacgaacgcg
     1081 ccgctgttca ggcgcggaat gatgaagaag agaacggcag ccccggcaat ggtgagaatg
     1141 cccagcagcc cggcaatggc cgcgagcgaa ccctggaatc gcgaagccaa acgctctggc
     1201 acctcgacaa ccaggccttc tttttctgag cgccgcatct ccatgctgac gaaagtggca
     1261 atcgccacca gcatgaagag cgcaaaggtg aacaggaaga gcgtatccac cgtgagcacg
     1321 gccgccgcca gcagcatgag gaacgccaga atggccaggt aaaccaggtc gcgatctcgc
     1381 cgcacggaaa agatcttgac caccatggtg aacagcacca tgtggaccgt ggcgccgatg
     1441 aagctttgcg agatgtatag gtagtcgagg aggtagaaaa cgaaataaac cagcgtgagg
     1501 tagctggtcc agcgttcgga gatgctgatc tccttgcgca acagcaggag ccatccccga
     1561 accaggagcg ctggcacaac cagaatgagt gaaggtggat caagcttgtt ggtgccaagc
     1621 agggcgatga agccggtcac cagcagaaga tagagcgacc actggaagaa gcgctctgct
     1681 cctccggtgc gttcggctgg atgggtaagg acctgggacg gcacacgctt attgtgagcg
     1741 atatttcgcc aggataaaag cgcaaagcag ggcctgacgg cctgcggcag gtggcgaaag
     1801 tgttagaatc attgtgccgg gtcccgcgcg acgcaatccc gccaaccccg ccaggtccgg
     1861 aaggaagcaa cggtaacggg ctagtgcgtg tgcagcgggt tccccggttt gatttccttc
     1921 ctctcgcctc cggcgtttcc cttttgaacc gctccgctgc cgctgtgtgc ttctatcgct
     1981 ctcagctgaa agggcttaca ataactggtt tcattccttc gtgctcggga gaaatcattt
     2041 ggccaatcta gtgcgggcga aaatctcagc cctcgggacc tacgttccac ccaaactgct
     2101 caccaatgat gacctggaaa agatggtgga gaccaccaac gaatggatcc tggagcgcac
     2161 cggcatccgg cagcgccata ttgtagaaaa aggcgttccc acttcgcatt tggccacgga
     2221 agccgccaac cgtgcgctgg cggaacgcgg cattcccgcc actgacgttg aagccatttt
     2281 ccttggcacc gtgacgccgg acatgctgtt tccctccacg gcctgcctgg tgcaagaccg
     2341 tattggcgcc aagggcgcct ggggttatga catttccgcg gcctgttccg ggttcgtcta
     2401 cgcgttgcag accggcgtga agtttgtgga gtccggcgcg cacaagcgcg tgctcgtgat
     2461 tggcgctgac gtgatgtctt ccatcatcga ctacactgac cgcgccacct gcgtgatctt
     2521 tggcgatggc gccggagcag tgctggttga gcccgcaact gacgaaaact actgcatcga
     2581 ttttctccac gaagttgacg gctccggcgg atgctacctg agaatgcccg gcggcggcag
     2641 cctaaatccc tcaacctgcg aaaccgtcca aaagaaaatg cactacgttc atcaggacgg
     2701 ccaggccgtc ttcaaatacg ccgtgcgcaa aatggcggaa gcctcagcga atgtgctgga
     2761 gcgcaacggc ttcaagggcg atgacgtggc tctgtttgtg ccgcatcagg ccaacaagcg
     2821 catcatcatg tctgccgcgg accggcttgg gctgaaggaa gatcgcgtca tcattaatat
     2881 tgacgagttc ggcaacacca ccgccggcac cattccgttg gccctggaaa gcgctcgcca
     2941 gcagggccgg ttgaagaagg gcgacct
//
LOCUS       DASQYP010000294         6224 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_12116, whole genome shotgun sequence.
ACCESSION   DASQYP010000294 DASQYP010000000
VERSION     DASQYP010000294.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 6224)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6224)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6224
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_12116"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1000)
                     /gene="murE"
                     /locus_tag="VE783_09445"
     CDS             complement(<1..1000)
                     /gene="murE"
                     /locus_tag="VE783_09445"
                     /inference="COORDINATES: protein motif:HMM:TIGR01085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramyl-tripeptide synthetase"
                     /protein_id="HYX53666.1"
                     /translation="MNFSQLLLGLGVPARGGDPEILGVDYDSRRVRPGWLFVAMRGEA
                     TDGNRYIDAAIMKGAAAVVTDSSHEQPRTGVAWAVAPHGRKALAELGSAFYSRPAESL
                     KITGITGTNGKTTTTFLTEAILNHCGKRAALVGTIEYHVPAPDQPLGRKVLPAPHTTP
                     ESLELNQLFAEALASGASDAVMEVSSHALEQGRVWGIPYDVAVFTNLTRDHLDYHHDM
                     DAYFAAKRMLFEGAGSRPPRAAVINADDPYGRILLSHRESDQVIRYGVGEADFRAQQI
                     SLEPTQTTFELRTPGGNVQIRSRLIGKVNVYNLLAASAAAWSRGCTLEQNSEAIANF"
     gene            complement(1056..2246)
                     /locus_tag="VE783_09450"
     CDS             complement(1056..2246)
                     /locus_tag="VE783_09450"
                     /inference="COORDINATES: protein motif:HMM:NF012382.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal phosphate-dependent aminotransferase"
                     /protein_id="HYX53667.1"
                     /translation="MPSSPSRRAARTVQSEIRVMSIECEKIKGINLAQGVCDTPVPEV
                     VREGARLAMERGINSYTRAEGLAEIRRAVAGKMLRFNGLECDPETEVIIHSGSTGAFY
                     ASCLALLNPGDEVILFEPYYGYHLNTLIAVDARPVFVTLQAPNWRFSPEDLERVVTPK
                     TRGIMINSPANPSGKVFAPEELGWVADFAQRHDLFVFTDEIYEYFIYDGRHISPATLP
                     GMRERTITISGYSKTFSITGWRVGYTICDRKWAQSIAYFHDLIYVCAPAPLQMGVAEG
                     ILKLPDSFYQEIGKEYLHKRDLLCNTLKEIGLTPSVPKGAYYVLADASMLGGRTSKEK
                     SMTLLRETGVATVAGSAFYHAGGGENLVRFCFAKTDSELAEACRRLKTLPEKLGQHAT
                     AVHK"
     gene            complement(2307..2903)
                     /locus_tag="VE783_09455"
     CDS             complement(2307..2903)
                     /locus_tag="VE783_09455"
                     /inference="COORDINATES: protein motif:HMM:NF016176.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YceI family protein"
                     /protein_id="HYX53668.1"
                     /translation="MRHTKKLAAVVVLLSAAFTLALAQQPRSFMFDPAQTTVHFTLGT
                     ALHTVHGTFKLTRGTILFDPATGTASGELVVDATSGESGNGSRDKKMHKEILESQKFP
                     VITFTPQHFTGALPEQGKTHLVVEGQFGIHGQSHPMTLNIDAELNGGNATATTTFAVP
                     YKQWGMKDPSAFLLHVNDKVEISLQTAAHTGVVQAVPR"
     gene            complement(2905..4062)
                     /locus_tag="VE783_09460"
     CDS             complement(2905..4062)
                     /locus_tag="VE783_09460"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013646.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HYX53669.1"
                     /translation="MQQVRDTDVFIAGGGPAGLAAAIVARRHGLRVLVADRDVAPIDK
                     ACGEGLMPDSLEVLHRLGVSLEKYETGTFRGIRFVGPENSVSADFPSGHGSGIRRVLL
                     HQALIAEAEAAGAETLWRTRIRFGPGSRVEADGAEVRCKWLIGADGQNSTVRPWAGLD
                     AGHVQSQRIGLRQHFRVRPWSEFVEIYWADSGQAYVTPVGRNEVCVALISRERYQSFA
                     AGLAQFPKLAVRLAGGLPSTQVRGALTIARRLKTVASSRVALIGEASGSVDAITGEGL
                     ALAFRQALALGEAMTAGDLSPYQAAHRRIMSLPAFMSRSMLLMDAHPWLRRQSLRAFA
                     ARPKLFERLLGVHVGETPLATFASSSILDMGWHMMTARAVPSPEVIAHEVR"
     gene            complement(4069..5118)
                     /locus_tag="VE783_09465"
     CDS             complement(4069..5118)
                     /locus_tag="VE783_09465"
                     /inference="COORDINATES: protein motif:HMM:NF012421.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-oxoacyl-[acyl-carrier-protein] synthase III
                     C-terminal domain-containing protein"
                     /protein_id="HYX53670.1"
                     /translation="MKIASVGVAFPENVYEQQVITNELKDQWRNKLPNPEVLSRLHAR
                     CGVDKRHLALPLEAYDGIRSWGHANDLWIDAAQKLGRDAICHALTPQGLMPSDINALI
                     FTTVTGVASPSIDARLVNRMNLSPNIKRMPIFGLGCVAGAAGLARAADYVRAYPDQLA
                     VLLSVEICSLTWQRDDVSMANMISTGLFGDGAAAVLVAGSDAGLDGPEIIDTRSIFYP
                     NTQDVMGWNISQDGFKIILSPDVPEVIKANLGSDVDTFLYDHELTRDDISSWIIHTGG
                     PRVLEAVAESLNLTDKDLELSWNSLAEVGNLSSASVLVVLEKFLAERRGEPGTYSVLA
                     AMGPGFCSELVLIRW"
     gene            complement(5226..>6224)
                     /locus_tag="VE783_09470"
     CDS             complement(5226..>6224)
                     /locus_tag="VE783_09470"
                     /inference="COORDINATES: protein motif:HMM:NF012428.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate aminotransferase family protein"
                     /protein_id="HYX53671.1"
                     /translation="VETVIKFSRAHTRRNGLLYAKDGFHGLTTGALSLMGDTQWSKGF
                     GPLLPHAESVPFANLEELERKLATRKFAAYILEPIQAEAGICVPDRNYLQQAQALCRK
                     YGTLFVLDEVQTGFFRTGKFLAIHYFGLDPDMVVLAKTLSGGLVPSGAVLMSEEIYET
                     VYSSLGRSIIHTSTFSENNLAMRAGLATLRVLEDENLGARSEQLGTLLRNRLTEELSG
                     FDMVEEVRGLGMLNGIVFRPPKKVHQRLAFEAFRHVHEGMFGQMVVMRLFRDYKILTQ
                     ICGNNLMVLKVAPPLIINEEQIEEFVTAARAVVEVVHSSGTFWQDALQLAKRAVNV"
BASE COUNT         1290 a         1829 c         1848 g         1257 t
ORIGIN      
        1 tgaaattggc gatggcctcg ctgttctgct ccaacgtgca gccgcgactc catgcagcag
       61 cactcgccgc cagcagattg tagacgttta ctttgccgat cagcctggaa cggatttgca
      121 cgtttcctcc cggcgtcctg agttcgaagg ttgtctgtgt cggctcaagg ctgatctgct
      181 gtgcgcgaaa gtcggcttcg cctacgccat agcgaatcac ctgatcgctt tcacgatggc
      241 tgagcaggat gcggccataa ggatcatcgg cgttgatcac cgcggcgcgc ggcggacggc
      301 tgcccgcgcc ttcaaacaac atgcgcttgg cggcgaagta tgcatccatg tcatggtggt
      361 aatccaggtg gtcgcgcgtg agattggtaa agaccgcgac gtcgtacgga atcccccaca
      421 cgcgaccctg ctccagcgcg tgggaggaaa cttccatgac tgcgtcagag gcgccgcttg
      481 ccaatgcctc agcgaaaagc tggttcaact ccagcgactc cggagtggta tgcggcgcgg
      541 gcagaacttt gcggcccagc ggctgatccg gggccggcac atggtactca atggtcccca
      601 ccagcgccgc tcgcttgccg cagtgattga ggatggcttc ggtcagaaac gtcgtggtgg
      661 tctttccgtt tgtgccggtg atgccggtaa tcttcagcga ctcagccgga cgtgaataaa
      721 acgccgatcc caactccgcc agcgctttcc ggccatgcgg cgcgaccgcc caagcgaccc
      781 cggtacgtgg ctgctcgtga gatgaatcgg tgaccacggc cgcggcgcct ttcatgattg
      841 cggcgtcaat gtaccggttt ccatctgtgg cttcgccgcg catggcgacg aacaaccacc
      901 cgggtcgcac acgccgggaa tcgtagtcca cacccaaaat ttcgggatcg ccgccgcggg
      961 ccggcacacc aaggccgagc agcaattggg agaagttcat tgctccgatt ataagtggag
     1021 tagtgacgag gaagagcgcg gcgccgggga aggccctact tgtgcactgc ggtcgcgtgc
     1081 tggcccagtt tctccggaag tgtcttgagc ctgcggcagg cttctgccag ttcggaatcg
     1141 gtcttggcaa agcagaagcg gaccagattt tctcctccgc ctgcatgata aaacgcgctg
     1201 ccggctaccg tggccactcc ggtttcgcgc agcagcgtca tcgatttttc cttactggtt
     1261 ctgccgccga gcatggaggc atccgccagc acgtagtaag ccccttttgg taccgaaggt
     1321 gtgaggccga tttctttgag cgtattgcac agcaaatcac gcttgtgcag gtattccttg
     1381 ccgatctcct gatagaagct atccggcagc ttcaggatcc cttccgccac acccatctgc
     1441 agcggcgccg gcgcgcatac ataaataagg tcgtggaagt aggcaatgga ctgcgcccat
     1501 ttgcgatcgc atatggtata gccaacacgc cagccggtga tgctgaaagt ctttgaatat
     1561 ccggatatgg ttatggtccg ttcgcgcatg ccgggcagcg tggccgggct gatgtggcgg
     1621 ccgtcataga taaagtattc gtagatctcg tcggtaaaga cgaagagatc atgccgctgc
     1681 gcaaagtcgg cgacccatcc aagctcttct ggcgcgaaca ctttgccgga aggattggcg
     1741 ggcgagttga tcatgatccc gcgcgtcttc ggcgtgacca ctcgctccag atcttcaggc
     1801 gagaagcgcc agttcggcgc ttgcagggtg acgaacaccg gcctggcatc cacagcaatc
     1861 aaggtgttca ggtggtagcc ataataaggt tcaaagagga tgacctcatc accgggattg
     1921 agcagcgcca ggcagcttgc gtagaaggcg ccggtagaac cggaatggat gatgacctca
     1981 gtctccggat cgcattccag gccgttgaag cggagcatct ttccggcaac ggcgcggcga
     2041 atttccgcca gaccttctgc gcgggtgtaa ctgttgatgc cgcgctccat cgccagccgc
     2101 gcgccttccc ggacaacctc cggcaccgga gtatcacaga ctccctgcgc aaggttgatg
     2161 cccttgatct tctcgcactc aatagacatc acgcggattt ccgattgcac ggtgcgtgcg
     2221 gcccgccggc tgggggaact tggcatggaa cggtctcctg actaggcagt cagactattg
     2281 taaatcgcat ggggcaagag agctggttat cgcgggacag cctgaacaac gcctgtatgg
     2341 gcggcggtct ggaggctgat ctccaccttg tcattcacgt gcagcagaaa tgcgctggga
     2401 tctttcatgc cccactgctt atagggaacc gcaaaagtgg tggtggcggt agcgttgccg
     2461 ccgttcagct ccgcatcaat gttcagggtc atagggtggg attgaccgtg gatgccgaat
     2521 tggccttcaa cgaccaggtg tgtcttaccc tgttccggga gagcgccagt aaagtgctgc
     2581 ggggtgaagg tgattaccgg aaacttctgg ctctccagaa tttccttgtg cattttcttg
     2641 tcacgggagc cgttgccgct ctcgccgctc gtggcatcaa ctaccagttc accggaagcc
     2701 gtgccggtag caggatcaaa cagaatggtg ccccgggtga gcttgaaagt gccgtgaacg
     2761 gtatggagcg cagtgccgag cgtgaagtgg actgtcgtct gggctggatc gaacatgaac
     2821 gaccttggct gctgtgccaa tgcgagggtg aacgctgccg ataacagcac gacgacggcg
     2881 gcaagcttct tcgtgtgtct caagctagcg aacctcatga gcaataacct ccggtgatgg
     2941 aacagcccga gccgtcatca tatgccatcc catatcaagg atgctggaac tggcaaacgt
     3001 ggcgagcggc gtttctccca cgtgcacgcc cagaagtctc tcgaacagct tcggccgagc
     3061 ggcgaaagct cgcaatgatt gccgtcgcag ccacgggtgt gcatccatca gcagcatgct
     3121 ccgggacatg aacgcgggca gtgacatgat gcggcgatgc gcggcctgat aagggctgag
     3181 atcgccggca gtcattgcct cacccagcgc aagcgcctga cgaaacgcca atgccagccc
     3241 ctcaccggta atagcatcca ctgagcccga ggcttcgccg atcagcgcga cccgactgct
     3301 tgcaacagtt ttcaaacgtc gcgcaatggt cagcgcgccc cggacctgcg tggagggcaa
     3361 accgccggca agacgcactg ccagtttagg gaattgcgcc aggccggcag caaacgactg
     3421 atagcgctcg cgcgaaatca gtgcaacaca aacttcattc cgcccaacgg gtgtaacgta
     3481 agcctgccct gagtcagccc agtaaatctc tacgaactcg ctccacggcc gcacgcggaa
     3541 gtgctgccgc aaaccaatgc gctgtgactg gacgtgcccg gcatcaagcc cggcccaggg
     3601 acgcacggtg gagttctggc catcggcgcc gatcagccac ttgcagcgga cctctgctcc
     3661 atccgcttcc acgcgagacc ccggaccaaa ccggatgcgc gtgcgccaga gcgtctctgc
     3721 gcctgctgct tcggcttcgg cgatgagtgc ctgatgaagc agcacgcggc ggatgccgct
     3781 gccatggccg ctgggaaaat cggcagaaac ggaattttcc ggaccaacga aacgaatacc
     3841 tcgaaatgtg cctgtttcat acttctcaag agaaacgccc aggcgatgaa ggacctcaag
     3901 actatccggc atgaggcctt caccgcaggc tttgtcaatg ggagcaacgt cgcggtcggc
     3961 caccagcacg cgaaggccat gcctgcgcgc aacaatggcc gcggccagtc ctgcgggacc
     4021 gcctccggct ataaagacgt cagtgtctcg tacctgttgc atgaatgatt accagcgaat
     4081 cagcaccaac tccgagcaga atccaggacc catggccgca agcacgctgt acgtgcccgg
     4141 ctcgccgcga cgctccgcca ggaatttttc aagcaccaca agaacggagg cagaagagag
     4201 attgcctact tctgcgagcg agttccagga aagctccaga tctttgtcag tgaggttcag
     4261 cgattcggca accgcttcca gtacacgcgg tccgccggtg tggatgatcc agcttgaaat
     4321 gtcatcccgg gtcagctcgt ggtcatagag gaacgtgtcc acgtcgcttc caagattggc
     4381 cttgatcact tcaggcacgt cgggcgagag aatgattttg aatccgtcct gggagatgtt
     4441 ccagcccatc acgtcctgcg tgttgggata gaagatggaa cgggtgtcga taatctccgg
     4501 accatccaga cctgcgtcgg agccggcgac cagcaccgcc gcggcgccat cgccgaataa
     4561 cccggtcgaa atcatgttgg ccatgctgac gtcgtcgcgc tgccatgtga gcgagcaaat
     4621 ttcaaccgag agcagaaccg cgagttgatc aggatacgcg cgcacgtaat ctgcggcgcg
     4681 cgccagcccc gcagcgcctg ccacgcagcc aaggccgaag atcggcatgc gcttgatgtt
     4741 gggggaaaga ttcatgcggt taaccagtcg cgcgtcgatc gatggactgg ccacaccggt
     4801 gacggtggta aaaatcagcg cattgatgtc agaaggcatg aggccttgcg gcgtcaaagc
     4861 atggcaaatc gcgtcgcggc cgagcttctg cgcggcgtcg atccagagat cgttggcatg
     4921 tccccatgag cgtatcccgt catacgcttc caggggcagc gcgagatgcc gtttgtctac
     4981 tccgcagcgg gcatgtagac ggctgagcac ttccggattg ggaagcttat tccgccattg
     5041 gtccttgagt tcgttggtga ttacctgctg ctcgtaaaca ttctcaggaa acgcgacacc
     5101 tacactggcg attttcattc tgttgaacca cttttctgcg cctgggcgtt tgaggggctt
     5161 ctcagcttga acgcattttg aagccccgtg ttgcggcgct ttacgccctt tttacaggca
     5221 ggttgctaga cgttgaccgc acgtttggcg agttgaagcg catcctgcca gaacgtgccg
     5281 gaggaatgaa ccacctccac cacggcgcgc gctgcggtta cgaactcctc aatctgttct
     5341 tcgttaatga tgagcggagg agccactttg agcaccatca gattgtttcc gcagatctgg
     5401 gtcaaaatct tgtaatcgcg gaacaggcgc atcacaacca tctggccgaa catgccttca
     5461 tgcacgtggc ggaacgcttc aaaagcaagc cgctggtgga ccttctttgg aggacggaat
     5521 acgatgccat tcaacatgcc gagtccgcgg acctcttcca ccatgtcaaa gccgctgagc
     5581 tcttccgtga ggcggttgcg cagcagtgtg cccagctgtt ctgagcgcgc gccgagattt
     5641 tcatcttcca gcacacgcag cgtcgccagg ccggcgcgca tcgcgagatt gttttcgctg
     5701 aatgtagatg tatggatgat cgagcgcccc agcgaactgt acaccgtctc gtaaatctct
     5761 tccgacatga gcacggcgcc gctggggaca agtccgccgc tcagcgtttt ggcgagcacc
     5821 accatgtcag gatcaagacc gaaataatgg atagccagga attttcccgt gcgaaagaag
     5881 ccggtctgca cttcgtcgag cacgaagagc gttccgtatt tcctgcacag cgcctgcgcc
     5941 tgctgcaggt agttgcgatc cggcacgcag atacctgctt ctgcctgaat gggttcgaga
     6001 atataggccg cgaatttacg cgtggcgagc ttgcgctcca gctcttcgag attggcaaac
     6061 ggcactgatt cggcgtgggg cagcaagggg ccaaaaccct tgctccactg cgtgtcgccc
     6121 atcagcgaga gagcgccggt ggtgagaccg tggaagccat ctttcgcata gaggaggccg
     6181 ttgcgcctgg tgtgggcgcg ggaaaacttg attacggtct ccac
//
LOCUS       DASQYP010000295         2409 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_310233, whole genome shotgun sequence.
ACCESSION   DASQYP010000295 DASQYP010000000
VERSION     DASQYP010000295.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 2409)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2409)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2409
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_310233"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..233
                     /locus_tag="VE783_09475"
     CDS             <1..233
                     /locus_tag="VE783_09475"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53672.1"
                     /translation="TGQFAELGERLFHTSGMRFPLAFRTRTRCLTRHQGMRRHIEVAV
                     SPRSMAKLYCNKERPLRPVTASDDARRSVSAG"
     gene            complement(247..537)
                     /gene="hfq"
                     /locus_tag="VE783_09480"
     CDS             complement(247..537)
                     /gene="hfq"
                     /locus_tag="VE783_09480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003095657.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_process: GO:0006378 - mRNA polyadenylation [Evidence
                     IEA];
                     GO_process: GO:0016070 - RNA metabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA chaperone Hfq"
                     /protein_id="HYX53673.1"
                     /translation="MENKPAQNIQDSFLNTARKDKTQVTIYLLSGVKLTGRIRSFDKY
                     SVVLETNNQEQLIFKHAISTVVMSKGSHHPESRGGGHHAGAEHESAPAKVEG"
     gene            731..1858
                     /locus_tag="VE783_09485"
     CDS             731..1858
                     /locus_tag="VE783_09485"
                     /EC_number="2.6.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF013227.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DegT/DnrJ/EryC1/StrS family aminotransferase"
                     /protein_id="HYX53674.1"
                     /translation="MLDLSRQYAGLRDEILAAVTRACDSQKYILGDEVTAFEREFATL
                     CGSALAVGCASGTDALWLALVAAGVREGDSVITTPLSFFATASSILRAGARPVFVDID
                     PETLNIDPAKLEQSLRHSPQRKAVMPVHLYGQCADADAINCIAAEFKLSVVEDAAQAA
                     GATWNGRLAGSLGHAAAFSFYPTKNLSAFGDAGALTTDDAALAEHARSLRNHGAKQRY
                     YHDEIGANSRLDSIQAAVLRVKMPHLKRWNEERRQRAKTYDRLFASAGLTRTSASSLP
                     PVTLLKTRPQAYHIYHQYVIRVRERDKLREFLKERGVGSEVYYPVPLHQQKCFAYLGY
                     APGDLPEAERAALDVLALPMFAELQEDEQRHVVDSIAEFYS"
     gene            complement(1910..2236)
                     /locus_tag="VE783_09490"
     CDS             complement(1910..2236)
                     /locus_tag="VE783_09490"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53675.1"
                     /translation="MNNDSQLHALIKNMASEHRPDLPSPGLIWWRAQVQKKLAEKERI
                     ERPMMIMRMVVAAAALVIAVGLMVATRGQFTAGGHTGTLVVLSVITVAGFLVLPLLLR
                     TSTNTR"
     gene            complement(2229..>2409)
                     /locus_tag="VE783_09495"
     CDS             complement(2229..>2409)
                     /locus_tag="VE783_09495"
                     /inference="COORDINATES: protein motif:HMM:NF016432.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="sigma factor-like helix-turn-helix DNA-binding
                     protein"
                     /protein_id="HYX53676.1"
                     /translation="ELTPQERAVLWLAHVEELSHKEIAAILSVKEKSVRVIVFRARER
                     AKALLQAAGFRGAHE"
BASE COUNT          467 a          732 c          697 g          513 t
ORIGIN      
        1 gaacgggcca gttcgcggaa ctcggcgagc gactcttcca caccagcggc atgagatttc
       61 ctctcgcttt cagaacgcgc acccgctgcc tcacgcgcca tcagggcatg cggaggcaca
      121 tcgaggtcgc ggtcagtccg cgatcgatgg cgaaactcta ctgcaacaag gaacgcccgc
      181 tccggccggt cacggccagt gacgatgccc gcaggtcggt ctctgcggga tagcttgaca
      241 ggaatgttag ccctctactt tggcgggagc gctttcatgt tcggccccgg cgtggtgacc
      301 gccaccgcga gattccgggt ggtggcttcc cttggacatt accaccgtag agatggcgtg
      361 cttgaatatg agctgttcct gattgttggt ttccaggacg actgaatact tgtcaaagga
      421 ccggattcgg cctgtcagct tcaccccact cagtagatag atggtgacct gagtcttgtc
      481 cttgcgcgcg gtgttcagaa acgagtcctg tatgttttgt gccggcttgt tttccatctg
      541 ccgatctctc tcctgtaacg ctcgttgcct taaagaaccc agggaaacag cttaaacgcc
      601 gtcaaccacg tgtttcttta ttgtagcttt tggcgcccct ccgggcaaaa cagagtcccg
      661 tgttccggat gctagaatct cttcatatcc ggtgaagagt tctaaccaaa aaacgctggc
      721 ggaagtccct atgctggacc tctcccggca gtatgcaggg ctgcgggacg agattcttgc
      781 ggcggtaacc cgcgcctgcg actcgcaaaa atacatcctg ggggatgaag ttacggcctt
      841 tgagcgcgag tttgccaccc tctgcggaag tgctctggcg gtgggctgcg cttctggaac
      901 agacgcgctt tggctggcgc tggttgccgc tggcgtccgc gaaggcgatt cggtcatcac
      961 taccccgtta tcgtttttcg ccaccgcgag ttcgattctg cgcgcaggcg cccggcccgt
     1021 ttttgtggac attgatcccg agacgctgaa tatcgatccc gcgaagctcg agcaaagcct
     1081 gcggcactcg ccgcagcgca aggcggtaat gcccgtccat ctgtacggcc aatgcgcgga
     1141 cgcggatgcc attaactgca tcgccgccga gttcaagctc agcgtggttg aagacgcagc
     1201 gcaagcggca ggagcaacct ggaacgggag gcttgccggg tcacttggcc atgccgcggc
     1261 gttcagcttt tatccgacaa aaaatctcag cgcctttggt gacgccggcg cgttaacaac
     1321 ggacgatgct gccctggcag aacacgcgcg ctcgctgcgc aatcacggcg ccaagcagcg
     1381 ctactatcat gatgagatcg gcgcaaacag ccggctcgat tccattcaag cggctgtact
     1441 gcgcgtaaag atgccgcacc tgaagcgctg gaatgaagag cgccgacagc gcgcgaagac
     1501 ttacgatcgc cttttcgctt cggcaggact cacgaggact agtgcctcat cgctaccacc
     1561 ggtaacgctc ttgaagacgc ggccgcaggc ttatcacatc taccaccagt acgtgatccg
     1621 agtccgggag cgtgacaagc tgcgcgagtt cctcaaggag cggggagtcg gctctgaagt
     1681 gtattacccg gtgccgctgc accagcaaaa gtgctttgcc tatctgggat acgctccagg
     1741 cgacctgccc gaagccgaac gggcggcgct cgacgtgctg gccctgccca tgttcgccga
     1801 acttcaggaa gacgagcagc gccacgtggt ggactcgatc gcggagttct attcttaagt
     1861 cagttttgtt cttagaagaa ctttggagcg cagccgcact cggccgcgcc tagcgcgtgt
     1921 tcgttgacgt cctgagcaac agcggcaaca ccagaaatcc agcaaccgtg atcacagaga
     1981 ggactaccag cgttccggta tggccccctg ccgtgaactg tccccgggtt gccaccatga
     2041 gccccaccgc aatcaccagc gctgcagccg cgacaaccat tcgcataatc atcattgggc
     2101 gttcgatccg ttctttttcg gcgagcttct tctgaacctg cgcgcgccac cagatcagcc
     2161 cggggctggg caaatccggc cgatgctcgc tggccatgtt cttgatcaat gcatggagtt
     2221 gggagtcgtt attcatgggc acctcggaat ccggcggctt gcaatagagc cttggctctt
     2281 tcgcgcgcgc ggaacacgat tacacgcacg cttttttctt tgacgctgag gattgcagca
     2341 atctccttgt ggctgagctc ttccacgtgc gccagccaca gcacggcccg ttcctgcggc
     2401 gtgagctcg
//
LOCUS       DASQYP010000296        10059 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_201443, whole genome shotgun sequence.
ACCESSION   DASQYP010000296 DASQYP010000000
VERSION     DASQYP010000296.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 10059)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10059)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10059
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_201443"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1258)
                     /locus_tag="VE783_09500"
     CDS             complement(<1..1258)
                     /locus_tag="VE783_09500"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HYX53677.1"
                     /translation="MSAGHQPRILLIDDNQQNRYVLSRILQRANLTVEQFATGYAGLE
                     AVQRGPDLVILDVKLPDVSGYEVCRKIKSNQITAAIPVLQISAAFTSNENKVQALEGG
                     ADGYLTHPIEPAVLLATVRSLLRLKQAETSSRLLAEEWQCTFNALAESVVLLDLENKI
                     VRSNLAFEELYLAAGCHGEIVGQDAVPVFKKVLGRKGFLNHGHPARYSGEAQHGARWF
                     RITVDSVEREAERVGSVVVLADITERKLAERSLQNAEKLAATGRLAQTIAHEINNPLE
                     ALTNLIYLAQYSATEPPVKEFLHHASTELERVARITKQILSFHRDTKEPVAVDPNELV
                     ENVVSLYRPQIAANNMRVEWTRRELPPVAGFPGELRQVIANVLANAVDASPAGATITL
                     RTRRASTGSQEGVVFTIHDCGPGIPRE"
     gene            complement(1255..3405)
                     /locus_tag="VE783_09505"
     CDS             complement(1255..3405)
                     /locus_tag="VE783_09505"
                     /inference="COORDINATES: protein motif:HMM:NF024970.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HYX53678.1"
                     /translation="MITPLYEIALRNERDVVLARQRARDLALILGFDNQEQIRIATAT
                     SEMARNAFRYARSGKVNFAIRTGTQPILQVTIADAGPGIPHLQQIFDGRYKSQTGMGL
                     GIIGTKRLMDKFEITSKPSGTVVMFGKEVPSTGPPLTQARIQELRERVNALTPANPYE
                     EIDRQNREMLKTLQELRARQEELALLNRELEDTNRGVVALYAELDERADYLRRASELK
                     SNFLSNISHEFRTPLNSIISLARMLMDRMDGELTEEQETQVRFILESAKLLSDMVNDL
                     LDIAKVEAGKAKIRAKEFEVSELFSALKGMLKPLLANNTSVDLVFEAAPNLPLLHTDE
                     GKVSQILRNFISNAIKYTPQGEVKVVARGTEDNSIVFMVQDTGIGIAPENHEAIFQEF
                     TQVDNPLQERFRGTGLGLPLCRSMATLLGGRVWVESELGRGSRFYAEIPLLYRGGDLP
                     AETQEITAQEFTRPVVLLIDPDYETFAARHEEFRKTEFMLVHMETIERAQEWCARSVP
                     VAVICNIHAFGARGWEFLRTFVREAKNKTLRQVPLITTGRAEERAWALGAGVNTFFES
                     SVTPEMLVKELRELTRHAKPKKLLLVDDNDLSLYILRELLDRPWLQLLQAHNGREALE
                     MVDREHPDAMILDLVMPEMDGFAVLERLRSAEETRTLPVIVYTSKSMTAAETHFLQGM
                     GARLISKGEVTSTLSPEVLLQSLASYEITAEERK"
     gene            complement(3408..4418)
                     /locus_tag="VE783_09510"
     CDS             complement(3408..4418)
                     /locus_tag="VE783_09510"
                     /inference="COORDINATES: protein motif:HMM:NF018884.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016791 - phosphatase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SpoIIE family protein phosphatase"
                     /protein_id="HYX53679.1"
                     /translation="MNQISRSVVLSDSSSTSAARRAGAEVASALGMNETRAGEAAIII
                     SEAARNAVVYGKGGHLLLAGANGAGQTQLDIVAIDRGPGIGDVSRALQDGFSTGTTPG
                     TGLGAIRRMATSFDVFSSAKGTTLYARVAQSISPQTPKPALDYAGFLVPFPGEKACGD
                     NISWFGGRDCMMFLVVDGLGHGIAAMEAAEEAVRIFQAYQKSVPGDILARIHDALKKT
                     RGAAAAVAEIRPLSGLLTFAGIGNISASVLSHTLGRNLVSHNGTLGHVMGRIQEFKIE
                     WPRDAVLIMHSDGVQSRWDLSKYPGLLARQAAVIAGVMLRDFRRERDDASVLVVKPAT
                     KM"
     gene            complement(4415..4819)
                     /locus_tag="VE783_09515"
     CDS             complement(4415..4819)
                     /locus_tag="VE783_09515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010883997.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anti-sigma regulatory factor"
                     /protein_id="HYX53680.1"
                     /translation="MKVVRRESLPIRSSGDVVMARQKVRQWAADMQFTLVDQTKLVTA
                     ASELARNTLDHGKGGQMQIEQVDNLSRGGLKLIFEDHGPGIPDINAALKDGFTTGNGM
                     GLGLGGSKRLVSDFEIQSEPGKGTRITVVRWK"
     gene            complement(4816..5196)
                     /locus_tag="VE783_09520"
     CDS             complement(4816..5196)
                     /locus_tag="VE783_09520"
                     /inference="COORDINATES: protein motif:HMM:NF013868.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="STAS domain-containing protein"
                     /protein_id="HYX53681.1"
                     /translation="MERIPILRMGQFLLVTIQVDMHDQLALQLQDDLTQKISDTGAKG
                     VLIDISTLEIVDSFIGRMLANIAAMARVLDAETVVTGMQPAVAITLVELGMSLSGVRT
                     ALNVESGMELLYEVRGDFHAELEG"
     gene            complement(5197..6090)
                     /locus_tag="VE783_09525"
     CDS             complement(5197..6090)
                     /locus_tag="VE783_09525"
                     /inference="COORDINATES: protein motif:HMM:NF025719.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="STAS domain-containing protein"
                     /protein_id="HYX53682.1"
                     /translation="MSKLPDILSRHQTEIQADWVNEMASTVKRADLMSDAELKEQSHD
                     LLTAIVAGAKAGDVTSLSGSAWEPTRQLLMEISASRARQGFTSSETATFVLSMKQPLF
                     SAIRAELNKNPDAMFDEIWNANLMLDKLALLTADAFIETREQVITRQQQEMMELSTPV
                     VKLWDGILALPIIGTLDSARTQVVMESLLQTVVQTNSKFAIIDITGVPTVDTLVAQHL
                     LKTITAARLMGAECIISGVRPQIAQTIVHLGIDLSQVITKAKLSDAFALCLQRNGKTV
                     VSVNGRPGAAANRGPEGKKEE"
     gene            complement(6627..7028)
                     /locus_tag="VE783_09530"
     CDS             complement(6627..7028)
                     /locus_tag="VE783_09530"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HYX53683.1"
                     /translation="MRQVVIVEDTAKDAKLAIDVFRKMGATDVQVYDNIPAAVVQLRD
                     ILEDRRQAPDVILLDLSFPNDSGFEILRLWKSNAKLQKIPVVVWTVMGDTEQKICNYF
                     GVEKIVPKWSGARGLETALSAFGQSAGSAVQ"
     gene            complement(7178..8068)
                     /locus_tag="VE783_09535"
     CDS             complement(7178..8068)
                     /locus_tag="VE783_09535"
                     /inference="COORDINATES: protein motif:HMM:NF027641.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53684.1"
                     /translation="MLLAVYQPWWGDSKHIDVGYSSHDPQTLRQQIARAREMNIGGFV
                     VNWYGPRREFNDKSFQLLMQAAQENGEFKIAAQYDEAVDNPGNATDAVIVDLQYLYDK
                     YISVNAGPVRSAYLFYHGRPVIFVFPKSAGTDWDRVRQVANSWPERPLLIYKDQNDKY
                     DRDFDGYYAWVRPGSRGWQRDGSEIGVDYLDWFYKSMRGHHPDKLAIGGVWPGFDDSK
                     ASWSQNRHMRYDCGQTFADTMAVFRKYYGSQNAPPYLLVETWNDYEEGTDVERGVSHC
                     GPGGRERIDTARAAVEQREH"
     gene            8585..9301
                     /locus_tag="VE783_09540"
     CDS             8585..9301
                     /locus_tag="VE783_09540"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53685.1"
                     /translation="MRASNLAIARDRARDFHREQIAPGARRCRRKFLHFFPGGFRDET
                     YLAWERDYKAAAHQEWNRVLSRDTHAALLREGRHEEVALRAVKIEARTNLIFSFEKMA
                     LRDAVKPPSGARAFSTGLYEFLYGKSQPQEKFEQWCEVVAALPRRQTRVLTWPIVTVF
                     GFIAQPEQHIFLKPNVTKLAAREYGFPFHYESRPSWQTYQSYIEFVEQVRKDMRDLRP
                     RDMIDLQSFIWVQGSSEYEE"
     gene            9796..>10059
                     /locus_tag="VE783_09545"
     CDS             9796..>10059
                     /locus_tag="VE783_09545"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53686.1"
                     /translation="MDKFKDAGHLFRLAGVFLAGILVFILARGFLVPKSFGQYGHYRG
                     NALAELKSLPVSYAGHETCEACHSDVQEKKAKSKHARVNCESCH"
BASE COUNT         2015 a         3241 c         2634 g         2169 t
ORIGIN      
        1 tttcgcgcgg aatgccgggg ccacagtcat ggatggtgaa aaccacaccc tcctgcgagc
       61 cagtggacgc tcgccttgtc cgcagcgtga tggttgctcc ggccggcgac gcatccacgg
      121 cattcgccag gacattagca attacctgcc tcagttcacc cgggaacccg gccacgggcg
      181 gcagttcgcg tctggtccac tccacacgca tattgttggc tgcgatttgc ggacggtaaa
      241 gcgaaactac gttttccacc aactcattcg ggtccaccgc aaccggctcc ttggtatcgc
      301 gatggaaaga cagaatctgt ttcgtgattc gggctacccg ctccagttct gtggacgcgt
      361 gatggagaaa ttccttgacc ggcggctcag tggccgaata ttgcgccaga tagattaagt
      421 tggtcaaagc ttccagcggg ttattgatct catgggcaat ggtctgcgcc agcctgcccg
      481 tggccgccag cttctctgcg ttctgcaatg accgctcggc gagtttgcgc tccgtgatgt
      541 ctgccagaac cacgacagaa cccacgcgct cggcttcccg ctccacagaa tccacagtga
      601 tgcggaacca tcgtgcccca tgctgcgcct cgccactgta gcgcgccggg tgaccatgat
      661 tcaggaatcc cttccggccc agcaccttct tgaaaacggg tacagcatcc tgacccacaa
      721 tctcaccgtg gcagcctgca gccaagtaca gctcttcaaa cgccaggttt gaccggacaa
      781 tcttgttctc aaggtccagc agcaccaccg attcagccag cgcgttgaaa gtgcattgcc
      841 actcttcggc gagcagccgt gaactggtct ccgcctgctt cagccgcaac agggagcgca
      901 ccgtggccag cagtactgcc ggctcaatcg gatgggtcag ataaccgtcg gcgccaccct
      961 ccagcgcctg caccttgttc tcattactgg taaaagccgc cgaaatctgc agcacaggga
     1021 ttgctgccgt tatctgattg ctcttgatct tgcgacacac ttcatagccg gaaacgtcgg
     1081 gcagcttcac atccaggatc accaggtccg gtccgcgctg cactgcttcc agtcccgcat
     1141 acccggtagc gaattgctcc accgtcaggt ttgcgcgctg caggatgcgt gagaggacat
     1201 agcgattctg ctgattgtca tcaatcagca gaatgcgtgg ctgatgacca gcgctcattt
     1261 cctctcctca gccgtgatct cataactcgc cagcgactgc agcagcacct ccgggctgag
     1321 cgtgctagtg acttcgccct tgctgatcag gcgcgcgccc ataccctgaa ggaaatgggt
     1381 ttccgcggcc gtcatactct ttgatgtata aacgatcacc ggcagcgtgc gcgtttcttc
     1441 tgcagagcgc agcctttcca gcacggcgaa gccgtccatc tctggcatca ccagatccag
     1501 gatcatcgca tctggatgct cgcgatccac catctccagc gcttcgcgac cgttgtgcgc
     1561 ctgcagcagt tgcagccacg gccggtccag cagctcgcgc aggatataca gagaaagatc
     1621 gttgtcatcc acaagcagca gcttcttcgg cttggcatgc cgggtgagtt cgcgcagctc
     1681 tttcaccagc atttccggtg ttacggagct ctcaaaaaac gtattcaccc ccgcccccag
     1741 cgcccatgcc cgttcttcgg cacgtccggt ggtaatcagc ggaacctggc ggagcgtctt
     1801 gttcttcgct tcgcgaacaa acgtcctcag gaactcccat cctcgcgcgc cgaatgcatg
     1861 aatattgcag atcactgcaa ccggaacaga acgcgcgcac cattcctgcg ctcgctcaat
     1921 ggtttccatg tggaccagca tgaactcggt cttgcgaaac tcctcgtgtc gcgccgcaaa
     1981 cgtctcgtaa tccggatcga tcagcagcac caccggccgg gtaaactcct gcgctgtgat
     2041 ctcctgcgtt tccgccggca gatcgccacc acggtacagg agagggatct cggcataaaa
     2101 acgcgagccg cgtcccagtt cgctttccac ccacacacga ccgcccagca gagtggccat
     2161 gctgcggcac agcgggagtc ccaaccccgt gccgcggaag cgctcttgca gcggattgtc
     2221 cacctgcgtg aactcctgga agatggcttc gtgattttcc ggcgcaattc caatcccggt
     2281 gtcctggacc atgaacacaa tgctgttgtc ttcggtaccc cgcgccacca ccttcacctc
     2341 tccttgaggc gtgtacttga tggcattgga aatgaagttg cgcaggattt gcgagacctt
     2401 gccttcatcg gtatgcagca gcggaaggtt tggagcggct tcaaacacca ggtcaaccga
     2461 cgtgttgttg gccagcagag gcttgagcat tcccttgagc gcgctgaaca actcagagac
     2521 ttcaaactct ttggcgcgaa tcttggcttt ccctgcctcc accttggcta tatccagcag
     2581 gtcattgacc atgtccgaaa gcagcttggc ggattccaga ataaaacgga cctgcgtctc
     2641 ctgctcttcc gtcaactccc cgtccatgcg gtccatgagc atgcgcgcca gtgaaatgat
     2701 ggagttgaga ggcgtgcgga attcatgcga tatgttggaa aggaagttgc tcttcaactc
     2761 cgaagcacga cgcaggtagt ctgcgcgctc atccagctcc gcatacaacg ccaccacccc
     2821 gcgattagtg tcctctagtt cgcggttcag caacgcgagc tcttcctgcc gtgcccgcag
     2881 ttcctgcaat gttttcagca tctcccggtt ctgccggtca atctcttcat acgggttggc
     2941 gggcgtcagc gcgttcaccc gctctcgcag ttcctggatg cgcgcctgcg tcagcggcgg
     3001 ccccgtcgac ggcacttcct tcccgaacat tactaccgtg cccgaaggtt tgctggtgat
     3061 ttcaaattta tccatcagtc gcttggtccc gataatcccg agacccatgc cagtctgcga
     3121 cttgtagcgg ccatcgaaga tctgctgcag gtgggggatc cccgggcccg catccgcaat
     3181 ggtgacttgc agtatcggct gcgtacccgt ccggattgca aagttcacct tgccactgcg
     3241 cgcgtagcgg aatgcgttgc gcgccatctc cgaggtggca gtggcgatgc ggatctgctc
     3301 ctgattgtca aagccaagga tcagggcgag atcgcgcgcc cgctgccggg ccagcactac
     3361 atcgcgctca ttgcgcaggg cgatctcata taagggcgtg atcatggtca catctttgtc
     3421 gccggcttta ccaccagcac gctggcatcg tcgcgctcac gccggaaatc gcgcagcatc
     3481 actccggcaa tcactgccgc ctgccgtgca agcagcccag gatatttgga aaggtcccag
     3541 cgcgactgca caccgtctga atgcattatc aggactgcat cgcgcggcca ctcgattttg
     3601 aattcctgaa tgcgccccat cacgtgcccg agcgtcccat tgtgggagac caaatttcgc
     3661 cccagtgtgt ggctgagcac gcttgcagag atgtttccga ttccggcaaa tgtcagcagc
     3721 ccggaaaggg gccgtatttc cgctacggct gccgcagcgc cgcgcgtctt cttgagcgcg
     3781 tcgtggattc gcgccagaat gtctcccggc acgcttttct ggtaagcctg gaagatgcga
     3841 acagcctcct ccgcggcttc catggcggca atgccgtggc ccagaccgtc caccaccagg
     3901 aacatcatgc aatcccggcc gccgaaccag ctgatgttgt cgccgcacgc cttctctcct
     3961 ggaaatggca ccagaaagcc cgcataatca agcgccggct tgggcgtttg tggcgaaatc
     4021 gactgcgcca cacgtgcata cagcgtggtt cccttcgcgc tggaaaacac atcgaaagaa
     4081 gttgccatgc gccgaattgc gccgaggccg gttccgggag tggttccggt ggaaaatccg
     4141 tcctgcagcg cgcgggaaac atcgccgatt cccggcccgc ggtcgatcgc cacgatatcg
     4201 agctgagtct ggcctgcgcc gtttgcgcct gcaagcagca ggtggcctcc cttgccatag
     4261 accactgcgt tgcgcgccgc ttcagagatg atgatggccg cctcgccggc tctggtctca
     4321 ttcattccca acgccgaggc cacttcagcg cccgcgcggc gcgctgccga ggtggaactc
     4381 gagtctgaga gaacaacgct ccttgaaatc tggttcattt ccaccgtaca accgttatcc
     4441 gggttccctt ccctggctct gactgaatct cgaaatcgct taccagccgc ttgcttccgc
     4501 ccagccccag ccccatgccg tttccggtgg tgaagccatc tttgagcgcg gcgttgatat
     4561 ctgggatgcc ggggccgtgg tcttcaaaga tcagtttgag gccgccacgg gaaagattgt
     4621 ccacctgctc gatctgcatc tgcccgccct tcccatggtc cagcgtattg cgggcgagtt
     4681 cgctggcggc ggttaccagc ttcgtctggt ccaccagcgt aaactgcatg tctgccgccc
     4741 actgccgcac cttctgtctt gccatgacca cgtcgcctga actgcggatc ggcaggctct
     4801 cgcgccgcac caccttcatc cttcaagctc cgcgtggaag tcgccacgca cctcgtacag
     4861 caactccatg cccgattcca cgttcagcgc cgttcgcacc ccgctcaggg acatgcctag
     4921 ctccaccagc gtaatggcca ccgcgggttg cataccggtg accaccgtct ccgcatccag
     4981 cacccgagcc atggcagcga tgttcgccag catgcgcccg ataaatgagt caactatctc
     5041 cagcgtggaa atatcgatca gcactccttt ggcaccagtg tctgagattt tctgtgtgag
     5101 atcgtcctgc agctgcagcg caagctggtc atgcatgtcc acctgaatcg ttaccagcag
     5161 gaactgcccc atgcggagga ttggaatgcg ttccatttac tcctcctttt tcccttccgg
     5221 gcccctgttg gcagccgcgc ctggccggcc gttcacggag accaccgttt ttccattccg
     5281 ctggagacaa agcgcaaacg cgtcagacaa ttttgctttc gtgatgacct ggctcaggtc
     5341 aatccccaga tgcacgattg tctgcgcgat ctgcggccgc acgccgctga tgatgcactc
     5401 ggctcccatc agtcgcgccg cggtaatcgt ctttaacagg tgctgcgcca ccagcgtatc
     5461 cactgtaggc acacccgtga tatcaatgat ggcgaacttc gaattggtct ggaccaccgt
     5521 ttgcaacagt gattccatca ctacctgcgt ccgcgcgctg tccagcgtac cgataatcgg
     5581 caacgccaaa atcccatccc acaacttcac cactggcgtg gagagctcca tcatttcctg
     5641 ctgctgccgc gtgatcacct gctcccgcgt ctcaatgaag gcatccgccg tcaaaagggc
     5701 aagcttgtcc agcatcaggt tcgcattcca tatctcgtca aacattgcat ccgggttctt
     5761 gttcagttcg gcacggatgg ccgagaacaa cggctgcttc atggatagaa cgaaagtcgc
     5821 cgtctcgctg gacgtgaagc cctgccgcgc ccgcgacgcc gaaatctcca tcagtaactg
     5881 ccgcgtcggc tcccacgcgc taccggaaag gctggtcaca tcacccgcct tggccccggc
     5941 aacaatcgcc gtcagcaggt cgtgcgactg ctccttcaac tcggcgtcgc tcatcaggtc
     6001 ggcacgcttc acggtgcttg ccatctcgtt gacccaatcg gcctggatct cggtctggtg
     6061 ccgactcaga atgtcaggca gcttgctcat gtattagtcc tccgtgtcgg ggtaaaggct
     6121 ggtctcgaat tggcaagtat aaatctggcc gtccggactg ggaaagcaag ccagccgatc
     6181 tcttttgaat gacctagctt gacgcgaaat gagtcatgga ggggaaaggc gcgcgcaccg
     6241 aacaatgttt gatgcgagtc tcaccccagg ggttagctgc tgattcttgc tcccgttgaa
     6301 caacccgagc tgcatttcgc tccgtccacg cgactctatt tggtccaaag atcgcttcgc
     6361 cagtatggaa acaactcaga ggggagttcc cgctgtccgt gcaagcagac cgtaaccttc
     6421 atgtatctca gtagaagcgt tgtagacatg cccagaaacg cacgattcaa tgccggctgc
     6481 ccggaaataa acccaccgct caaaaacaat gctcttatcg aggatgcgat cgagaacctc
     6541 aactaggttt tcgagacttg acgtccgctg ggtagcacac gaccaacttg tacttctttg
     6601 acttcaagat catccgatcc ccatgctcac tgcacggctg agcccgcgct ctgcccaaac
     6661 gccgaaagcg cagtctccag acctctcgcg cctgaccact tcggcacgat cttctccacc
     6721 ccaaaatagt tgcagatttt ttgttcggtg tcccccatca cggtccacac caccaccggg
     6781 atcttttgca acttggcgtt ggacttccac agccgcagta tttcaaagcc gctgtcgttc
     6841 gggaaggaga ggtccagcag gatcacatcg ggcgcctggc gccgatcttc gagaatatcc
     6901 cgcagctgca ccacagccgc tggaatgttg tcgtaaacct ggacgtcagt tgcgcccatc
     6961 ttacggaaca cgtcaattgc gagtttcgca tccttcgcgg tgtcttctac aatcacgacc
     7021 tgtcgcatcc gggcacctta cgccggcaac ccaagccggc aatactggag tgatggcccc
     7081 cattttactg caacgccttc cctcgctgca catccgcgca acttcacaaa tcttcactgt
     7141 ttgagatttg aaatcaggaa catttgaacc acggccgtca atgctcccgc tgctccaccg
     7201 ctgcccgagc agtatcgatt ctttcccggc ctccagggcc gcaatggctc acgccgcgct
     7261 ccacatcggt accttcttcg tagtcgttcc aagtctccac cagcagatac ggcggggcgt
     7321 tctggctgcc ataatacttg cggaagaccg ccatggtatc ggcgaaggtc tgcccgcagt
     7381 cgtagcgcat gtgccggttc tgcgaccagc tcgccttgga atcgtcaaat ccgggccaca
     7441 cgccgccaat cgccagcttg tccggatgat ggccgcgcat gcttttataa aaccaatcca
     7501 gataatccac gccaatctcg ctgccatccc gctgccagcc ccggctgccc ggacgcaccc
     7561 acgcgtaata gccgtcgaag tcgcgatcgt acttgtcgtt ctggtcctta taaataagca
     7621 gcggacgctc cggccacgag ttggccacct gccgcacccg atcccagtct gtcccggcgc
     7681 tcttgggaaa aacaaagatc accggccgcc cgtgatagaa gaggtaagcc gaccgtacag
     7741 gtcccgcgtt gacactgatg tacttgtcgt acaggtactg caggtccacg atcacggcat
     7801 cagtcgcatt cccgggattg tccaccgctt cgtcatactg cgccgcgatc ttaaattcgc
     7861 cattctcctg ggctgcctgc atcagcagct ggaagctctt gtcattgaac tcgcgacgcg
     7921 gcccatacca gttcaccaca aatccaccaa tgttcatctc ccgggccctc gcaatctgct
     7981 ggcgcagagt ctgaggatca tgacttgagt accctacatc aatgtgcttg ctgtcgcccc
     8041 accacggctg gtagaccgcc agcagcatcg ggccaccctc aaccccttga aacggacgcg
     8101 ttacggcggc tcgcgttccc gccggcctgg cacacccaaa cagtgacaaa gatagaagag
     8161 ctatgactgc gaaattaatc tgcacaataa cctgctgaat ggaagtctaa gaccctccat
     8221 aagatggcaa attcagcagt tcgcgttggt tcggcacgct ctggcatcct tgctgaccag
     8281 tcttccgcgg cttcggaggt aggcgcccac ctccccctcc tgtttcggtg gtgaaaagtt
     8341 acctccgact tccttatccg ctgccggatt tcttgagggg gctcccctcc cctattcatc
     8401 cccgtcatcc ccaaatctaa aggacttagc tcgggtcatc cccttgagag tatcccccgc
     8461 ctcaggtgca cccctccgta aatggcgcac tgactttcta tgggtcccgg tcttcccgca
     8521 gcactcgttt ctatgcaaac tcgcgcctac agaggtgaat ccaaagtacc aagggaacgc
     8581 ttctatgcgc gccagtaact tagccatcgc gcgtgaccgc gccagggatt ttcatcgcga
     8641 acaaattgca cccggagcca gacgctgccg gcgcaagttt ctgcacttct tccccggcgg
     8701 ctttcgcgac gaaacctacc ttgcctggga gcgcgactac aaagctgccg cgcaccagga
     8761 gtggaaccgc gttctcagcc gggacaccca tgcagcgttg ctgcgagaag gcagacacga
     8821 agaagtcgcc ttgcgcgcgg tcaagatcga ggcccgcacc aacctgattt tttcgtttga
     8881 aaaaatggcg ttgcgcgacg cggtgaaacc gcccagcggc gcgcgcgcat tctccactgg
     8941 attgtatgag tttctctatg gcaaatcgca gccgcaggag aaatttgagc aatggtgcga
     9001 ggtggtcgcg gcgcttccgc gcaggcaaac gcgggtgtta acctggccga tcgtgacggt
     9061 gtttggtttt atcgcgcagc cggagcagca catctttctc aagccgaacg tgaccaagct
     9121 ggcggcgcgc gagtacggct tcccgtttca ctatgagtcg cgcccaagct ggcaaacgta
     9181 tcagagctac attgaatttg tcgagcaggt caggaaagat atgcgcgacc tgcgcccccg
     9241 cgacatgatc gacttgcagt cgttcatctg ggtgcagggg tctagcgagt acgaggagta
     9301 gccactgtgc gactgtagcg gcaggctggc agctggcagc taatttgtcg aagatcggcg
     9361 tcggcttcac gcggcaatca ccccggcgat cttctcacct tacacccatc ggcttgacga
     9421 agaaacagcg aaaaaggcca gcgctgccga cggcaaaagt accactctcc ggcgtctgct
     9481 ccaaccttcc cccgaaaacc cggaaatcgc ttcctgcccc ggctctgctg tggtaactgg
     9541 ctttcctgaa tccgcttgac cgccatctgc gctcgtctgt gttcatctgt gttcatctga
     9601 ggctaaaaca cacgcaactg tgacccgcat cacgttcgca cgtgacgcat ggcacagcgt
     9661 tccggtgact acaaggcaga ttctcgtatc cgtgttgggc gataactgcg gccagcccct
     9721 aacctccagc tttccccggg tggctgcaca gtcggagcag aaagtctttt atttctaagc
     9781 acctgaaggc tttatatgga caaattcaaa gatgcaggac atctctttcg gctggcgggc
     9841 gtttttctgg ccggaatcct agtctttatt ctggcccgcg gcttcctggt tcccaaaagc
     9901 ttcggccagt acggtcatta tcgcgggaat gctctcgccg aactcaagtc actgccggtt
     9961 tcctacgcgg gtcatgagac ctgtgaggcc tgccactctg acgtgcagga gaaaaaagcc
    10021 aaaagcaagc atgcccgtgt gaactgcgaa agctgccac
//
LOCUS       DASQYP010000297         2320 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_288499, whole genome shotgun sequence.
ACCESSION   DASQYP010000297 DASQYP010000000
VERSION     DASQYP010000297.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 2320)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2320)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2320
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_288499"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1031)
                     /gene="tuf"
                     /locus_tag="VE783_09550"
     CDS             complement(<1..1031)
                     /gene="tuf"
                     /locus_tag="VE783_09550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003640798.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003746 - translation elongation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006414 - translational elongation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor Tu"
                     /protein_id="HYX53687.1"
                     /translation="MAKEKFDRSKPHVNVGTIGHIDHGKTTLTAAITKVLSKHNPKIQ
                     FRSFDSIDNAPEERERGITIATAHVEYETPNRHYAHVDCPGHADYIKNMITGAAQMDG
                     AILVVAATDGPMPQTREHVLLARQVGVPYIVVALNKCDAVDDPELLDLVELEVRELLK
                     SYKFPGDDVPVVRLSALGALNGEAQWEKKIDELMEAVDKSVPLPERSIDKPFLMPIED
                     IFSISGRGTVVTGRIERGKVKVGEEVEIVGFRETRKTVVTGVEMFKKQLDEGMAGDNA
                     GLLLRGTPKEDVERGMVLAKPGSITPHTKFKAEVYVLTKEEGGRHTPFFKGYRPQFYF
                     RTTDVTGVA"
     gene            complement(1213..1554)
                     /locus_tag="VE783_09555"
     CDS             complement(1213..1554)
                     /locus_tag="VE783_09555"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53688.1"
                     /translation="MAFEQAQIPVQKTEEFEQLRSAIERTLSSAAVERFYSQLQSRSM
                     QIRDFEGIVVSGVFEVADATLARSGRTAKELYESLTVSDQALMREFYLEKIEQVDAKI
                     RQKYKKVYRYY"
     gene            complement(1656..1730)
                     /locus_tag="VE783_09560"
     tRNA            complement(1656..1730)
                     /locus_tag="VE783_09560"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(1696..1698),aa:Gly,seq:tcc)
     gene            complement(1829..2041)
                     /locus_tag="VE783_09565"
     CDS             complement(1829..2041)
                     /locus_tag="VE783_09565"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53689.1"
                     /translation="MDQNKRFQVAMAIYIVLAVLAWFLMSAERIPVGNGGISFRGLTL
                     VLLGFFAARTVLHWRAEKIRAESEQQ"
     gene            complement(2146..2224)
                     /locus_tag="VE783_09570"
     tRNA            complement(2146..2224)
                     /locus_tag="VE783_09570"
                     /product="tRNA-OTHER"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
     gene            complement(2236..2319)
                     /locus_tag="VE783_09575"
     tRNA            complement(2236..2319)
                     /locus_tag="VE783_09575"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(2284..2286),aa:Thr,seq:ggt)
BASE COUNT          465 a          769 c          557 g          529 t
ORIGIN      
        1 tccgccacgc ccgtcacatc cgtcgtgcgg aagtagaact gcggacggta gcccttgaag
       61 aacggcgtat ggcgtccacc ttcttccttg gtcagcacgt aaacttctgc cttgaacttg
      121 gtgtgcggcg tgatcgagcc cggcttcgcc agcaccatcc ctcgctccac gtcttccttc
      181 ggcgtgccgc gcagcagcaa tccggcgttg tcgcccgcca tgccttcgtc cagctgcttc
      241 ttgaacatct ccacgcccgt gactacggtc ttgcgcgtct cgcggaagcc gacaatctca
      301 acttcctcgc ccaccttcac cttgccgcgc tcgatacggc ccgtaaccac cgtgccgcgg
      361 cccgatatgg aaaaaatatc ttcaatcggc atcaggaacg gcttgtcaat cgagcgctcc
      421 ggcagtggaa ctgacttgtc caccgcctcc atcagctcgt caatcttctt ttcccactgc
      481 gcctcgccgt tcagcgcgcc cagggctgaa agacggacca ccggaacgtc gtcgcccggg
      541 aacttgtagc tcttcaagag ctcgcgaacc tcgagttcga ccaggtccag cagctcagga
      601 tcgtccaccg catcacactt gttcagcgcc accacgatgt agggcacacc tacctggcgg
      661 gccagcagca cgtgctcgcg cgtctgcggc atcggaccgt cagtggccgc aaccaccagg
      721 atggcgccat ccatctgcgc cgcgccggta atcatgttct tgatgtagtc ggcgtgaccg
      781 gggcaatcca cgtgcgcgta gtgccggttc ggcgtctcgt attccacgtg cgccgtagcg
      841 atcgtaatgc cgcgctcgcg ctcttccggt gcgttgtcga tcgaatcgaa cgagcggaac
      901 tggatcttcg ggttgtgctt gctcaaaacc ttggtgatgg ccgccgtcag cgtggtcttg
      961 ccgtggtcaa tgtgaccaat cgtccctacg ttcacgtgcg gcttgctgcg gtcaaatttt
     1021 tccttcgcca tttcgtcctc tcaagaaatc tatttccaat tccgcttcaa aaaattctgc
     1081 cctgcaatca gccttagagt cctcggcgct caaaactttc gcagctcacc cgcgccaggc
     1141 ttcgccactt aacctttttt ctggcgtccc gcagtggcta attgccaatt actaatggct
     1201 aattgctggc tctcagtaat accgataaac cttcttgtac ttctggcgga tcttcgcatc
     1261 cacttgttca atcttctcga gataaaactc acgcatcagc gcctggtcgg aaaccgtcag
     1321 cgactcatac agctccttcg ccgttcttcc cgaccgcgcc agtgtggcat cagccacctc
     1381 aaatacgcca gaaaccacaa tcccttcaaa gtcgcgtatc tgcatgctcc ggctctgcag
     1441 ctggctgtaa aagcgctcaa ccgctgccga actcagcgtc cgctcaatcg cagaacgcaa
     1501 ctgctcaaac tcttccgtct tctggactgg aatctgggcc tgctcaaatg ccatccgttc
     1561 aaatccttta tcgtccttac actcaccaat cttttgctac cgcccatgct gctcaggggc
     1621 tgaatgctga ctgctgagtg ctgactacta attcctggag cgggagacgg gaatcgaacc
     1681 cgcgaccaac agcttggaag gctgtgactc taccactgag ttactcccgc aagtggcctg
     1741 gggcgggtga cctgccgtta gtcgagaccg ttcttccgaa cggctgtggg aattcaaccc
     1801 acatctcccg tctcctgtgc cgcaatcttt actgctgctc gctttccgct ctgatctttt
     1861 cagctcgcca atgaagcacc gtgcgagcag cgaagaatcc caacaaaact agcgtcaatc
     1921 cgcgaaagct gatcccgcca tttccaaccg gaatccgctc ggcgctcatc agaaaccagg
     1981 ccagaacggc gagcacaatg tatatcgcca tcgccacctg gaatcgcttg ttctggtcca
     2041 tcacaaattc tggagctaat gaccgggacg atgaaagccg ccggtgatcc tctcccttac
     2101 cacgcgctgt gctctaccaa ctgagcacat cagcctttca aattctggag ctgatgaccg
     2161 ggacgatgaa cgccgcggtg atcctcttac caagcgctgt gctctaccaa ctgagcacat
     2221 cagcctttca aattctggag ctgatgaccg ggacgatgaa agccgccggt gatcctctcc
     2281 cttaccaagc gctgtgctct accaactgag cacatcagcc
//
LOCUS       DASQYP010000298         7464 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_120854, whole genome shotgun sequence.
ACCESSION   DASQYP010000298 DASQYP010000000
VERSION     DASQYP010000298.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 7464)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7464)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7464
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_120854"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2110)
                     /locus_tag="VE783_09580"
     CDS             complement(<1..2110)
                     /locus_tag="VE783_09580"
                     /inference="COORDINATES: protein motif:HMM:NF040606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="di-heme-cytochrome C peroxidase"
                     /protein_id="HYX53690.1"
                     /translation="MASTSPSPQQRQGFWHWLGDQLRRFFTHPLEFGWRKLRNFVLFI
                     WRFVKAIFELIYRMLSAVPRRLWIGTAITVGTLALLATTGFAGTMWYIDRQIAPAAKI
                     DQITYLGQGWGAEPNSPDRETYYYSAQGTYVADLRYDWMVNLERPWSEKKFASPEFMR
                     AYGFVVDDADISKNPGHLPVGFAPRYDPTYGEMMLDLTCAACHTGELQYVNNGTRYAV
                     RVDGGSGAADLKGMHAGHFAMDLFASLSATYLNPFKFSRFAESVLGKHNSSDARSLLR
                     HNLGAALKKQIKQAWIEKKLHVYPVEEGYGRTDGLGRILNTAFAVNLTEKNYRTADAP
                     VSYPPVWDIYKFDWVQYTGSVRQPMARNLGEAMGVGARYYLVDPYGRPLPNTERYEAS
                     TQLVNMKNIEEGLRKLTPPCWPEDVFGKIDVKLATEGSALFGQYCVKCHGPYLGNQYQ
                     TEADAPWKLKDYPKEIPHVAPGVPQEKLEPNPLQLKKDVPHWVMTMLPVEDIGTDPTS
                     ALNFVRYRLNLTSTGLSAEEVRTAMLHYYQQNYYRQVQYNWELSNDKSKEITDSQREA
                     AKKLYDHLVAEKEEGFIREQLGGVELKSVPLGAALNYVIRMVRDQAYQDMGFADDSAE
                     RHSWDGYWQLDIPEAQPQYKARPLAGIWATPPFLHNGSVPTLYQMLVPAYERSKKFYR
                     HTTLFDPYAVGLQSDASEKGA"
     gene            complement(2163..3239)
                     /locus_tag="VE783_09585"
     CDS             complement(2163..3239)
                     /locus_tag="VE783_09585"
                     /inference="COORDINATES: protein motif:HMM:NF020039.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SMP-30/gluconolactonase/LRE family protein"
                     /protein_id="HYX53691.1"
                     /translation="MSLRQSAFVEVASGLGYPEGPVYLADGSLICADVKAGAVLHFPP
                     DPANPGKFLPPKSIALGGSPNGCAVGPDGALYVCNSGGFSWDTLQPPVLPYTLNMPTI
                     QAPNFAGGQIQRLDLASGTVVTWCATNSVAPPAAPMACGIPCINDPRGLRGPDDLVFD
                     SDGGLWFTDWGKSDGITRDMSGVYYLPKGSQQPILKIPGRMSPNGIALSPDQKRLYVA
                     ESIPRWIVYWELSGPGAIRCNLRDPNNPASLRTLDGAHLLTAQIPECGQLDSMCLDEQ
                     GNIYVATYLPEGLDPVVNGGITVVSPAGEILEFIKFDIGAPEPLPSNICFGGPDRKTA
                     FMTLGGTGRIVSCQMKIPGLKHAF"
     gene            complement(3266..5413)
                     /locus_tag="VE783_09590"
     CDS             complement(3266..5413)
                     /locus_tag="VE783_09590"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004672 - protein kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein kinase"
                     /protein_id="HYX53692.1"
                     /translation="MLGQTLGHYVIEAQLGAGGMGVVYKAHDTQLDRDVALKVIPPEI
                     LNPTLEEAFRREARLASALNHPAIVTIYDVIHEKGLAGIVMEYLAGQTLNNLIPEQGF
                     AVEKAVELAIQIAEGVAAAHAAGIVHRDLKPGNVLITANGRVKILDFGLAKLVEKPTD
                     AATRTLSIFGDKVVGTIAYMAPEQARAETVDHRADIFSFGVILNQMLTGRLPFHAPNP
                     VALIRAIQDSAPNPPRQLRPEIPERLAATILQALAKKPDDRFHNMIDVIHALREYTRP
                     LPPSRTTIARSAPTPAQATVVESQGVAGAVPPVIGSERTSIAVLRFRAIGAGEDDNFL
                     AEGLASEVIHALTGVPGLRVAPQRASFKLGSDAADPVGIGRTLNTRYVVTGEIRHSGQ
                     RIRVSVELVDTIEERIVWTQKYDRMMADVFDMQEEISKAIVRSLGGQLIRVVTDFAYR
                     TPTENLDAWGLVRKAYHIYNYEFSPAGIQQAMLMLRRALELDPNYGAAYAYLSMCLLQ
                     SVLHGMSKTPEADWAEALGAADTAVKLAPNESEVLAWCSGIWLQNGMYEKAVQVLQRA
                     VKIAPFDLVAWGYLGLGHVSAGGEKEVLLGQEILMQLLADAPDHPSVPYWSQFLAVAQ
                     LRLGNYGGAAESARRAVELQPGYTLHVVLYAEALCRLGKKEESLKALASIQEYAPGYT
                     LEHFEKIVMGFCRSAETVEKVCGCLKTLHAAHA"
     gene            complement(5906..6625)
                     /locus_tag="VE783_09595"
     CDS             complement(5906..6625)
                     /locus_tag="VE783_09595"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53693.1"
                     /translation="MQKRSSFRTKVVLPLTLILKNGTQKQAAHTLDLTSDSARIGGLY
                     LPVTPGETIELQRGAARAKFFVFWVGAPGTMMAGQIGTKTLLAGRSIWGVELPEDRPD
                     LVRDVRTLRSGLPLVQSAGDEAQIRQMQATASIRAEGYGHTVFAQVLELSPTCAIVET
                     TAVLPTDTSVVVKLNLGHQSFEVAGVVQVSDPDWGMGIQFQSLSTYTQEKIAQARKAL
                     QEPGLVVAEHKPKVADRGLYW"
     gene            complement(6798..>7464)
                     /locus_tag="VE783_09600"
     CDS             complement(6798..>7464)
                     /locus_tag="VE783_09600"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53694.1"
                     /translation="KSAFAAALVAMAAPFVWTHRISWLPWPIESYLSGVHNMGKPAPW
                     LFPIFPWIAFAFAGMVVGWLLLSKTARRFEDGMVPLLALTGLGISSVGYGFDHLPWQL
                     YPVYDFWHTSPDFFLIRLGILLIILAFCEARTRLRPVFTGWRALNLLGQHSLLVYWVH
                     IEFVYGRLHILPRNGVGIGIASLGLLGITLAMVLLASIKQQWDRKTREKNRLLVYPAG
                     ASA"
BASE COUNT         1619 a         2174 c         2104 g         1567 t
ORIGIN      
        1 aagctccttt ttcggaagca tcgctctgca ggcctaccgc ataaggatca aacagcgtgg
       61 tatggcgata gaacttcttg ctgcgctcat acgcgggcac cagcatctgg taaagcgtgg
      121 gcacggatcc gttgtgcagg aagggtggag tcgcccagat gccggcgagc ggccgggcct
      181 tgtattgcgg ttgcgcctcc ggaatgtcaa gctgccagta gccatcccag ctgtggcgct
      241 cggcggagtc atcggcaaag cccatatcct ggtaagcctg gtcgcgcacc atgcggatca
      301 cataattgag cgcggctcca agcggcactg atttcaattc cacgccgcca agctgctcgc
      361 gaataaaacc ttcttccttc tccgccacaa ggtggtcgta tagcttcttc gcggcctcgc
      421 gctgggagtc agtgatttcc ttgctcttat cgttcgagag ttcccagttg tattgcacct
      481 ggcgatagta gttctgctgg tagtaatgca gcatcgccgt gcggacctcc tccgcactca
      541 ggccagtgga ggtcaggttc agccggtagc gcacgaaatt gagcgcggaa gttggatcag
      601 tgccgatgtc ctccaccggg agcatcgtca tgacccagtg aggcacgtcc tttttcaatt
      661 gaagtgggtt cggttcaagc ttttcctgcg gcaccccggg agccacgtgg ggaatctctt
      721 tgggatagtc cttcaacttc cacggcgcat ccgcctctgt ctggtactgg ttccccagat
      781 aagggccgtg gcattttacg cagtactggc cgaaaagagc gctgccttcg gttgccagct
      841 tcacgtcaat tttgccgaaa acatcttccg gccagcacgg cggcgtgagc ttgcgcagcc
      901 cttcctcgat gttcttcatg ttcacgagct gagtagaggc ttcataacgc tcggtattgg
      961 gcaacggacg cccgtaggga tccacaaggt aatagcgtgc gcccaccccc atggcctcgc
     1021 ccaggttgcg cgccatcggc tggcggacgc ttccggtgta ctgcacccag tcgaacttat
     1081 agatgtccca aaccggcggg tagctcacag gcgcgtcagc ggtgcgatag ttcttttcgg
     1141 tgagatttac ggcaaaagca gtgttgagga tgcgccccag gccatcggtg cgtccgtaac
     1201 cctcctcaac gggatagacg tgcagcttct tctcgatcca ggcctgctta atctgctttt
     1261 tcagagcggc gccgaggtta tgacgcagaa gagagcgcgc atcagaagaa ttgtgcttgc
     1321 ccagcacgct ctccgcgaag cgcgagaatt taaacggatt gaggtaggtt gcgctcagtg
     1381 aggcaaacag gtccatggcg aagtgaccgg catgcatgcc cttcaggtcg gccgccccgg
     1441 agccgccgtc tacgcgcacg gcgtagcgtg tcccattgtt tacatactga agctcgccgg
     1501 tgtggcaggc cgcgcaggtc aaatccagca tcatctcgcc ataagtggga tcatagcgag
     1561 gagcaaagcc caccggcaaa tggccggggt tcttgctgat atcggcatca tcaacaacga
     1621 agccataagc ccgcatgaat tctggcgacg caaacttctt ttccgaccat ggccgctcca
     1681 gattcaccat ccagtcgtaa cgcaggtcag caacgtacgt tccctgcgcg ctgtagtaat
     1741 acgtctcccg gtcaggtgag tttggctccg cgccccagcc ctggccgagg tacgtaatct
     1801 ggtcgatttt ggcagccgga gcaatctggc gatcgatgta ccacatggtt ccagcgaacc
     1861 cggtagtcgc aagcagcgct aatgtgccga ctgtaatagc ggttccaatc cacagacgac
     1921 gcggtaccgc cgagagcatc cggtagatca gttcaaagat ggccttcaca aatcgccaga
     1981 tgaagagcac gaaattgcgc agtttgcgcc aaccgaactc cagcggatgg gtgaagaacc
     2041 tgcgcagctg atcgccaagc cagtgccaga agccttgtct ctgctgcggt gagggagatg
     2101 tggacgccat cgtcctttcc tttcgatttc agaatcgcta aaattcagcc cgttcaggct
     2161 tttcagaatg cgtgtttaag ccccggaatc ttcatctggc agcttacgat tcggccggta
     2221 ccacccaagg tcataaatgc ggtctttcga tccgggccgc caaagcagat gttcgaaggc
     2281 agcggctccg gtgcgccgat atcgaattta atgaattcca gaatctcgcc ggcgggcgaa
     2341 accacggtga tcccaccgtt caccacggga tcaagacctt ccggcagata ggtggcgacg
     2401 taaatatttc cctgctcatc cagacacatg gagtcaagct ggccgcactc gggaatctgg
     2461 gcggtgagca ggtgagcgcc atcaagtgtc cggagtgaag cagggttatt cgggtcgcgg
     2521 aggttgcatc tgatggcgcc tgggccgctc agttcccaat acacgatcca acgcggaatg
     2581 ctctccgcaa cgtacagacg tttctgatcg ggcgaaagcg caattccatt cggcgacatc
     2641 cgccccggaa ttttcaggat gggttgttgc gagcctttcg ggaggtaata cacaccgctc
     2701 atgtcgcggg tgattccatc tgatttgccc cagtcggtaa accaaagccc gccatcggaa
     2761 tcgaacacca gatcgtccgg tccgcgcagg ccgcgcggat cgttgatgca aggtattccg
     2821 caggccattg gggcagcagg gggtgccacg gagttcgtcg cgcaccaggt tacaaccgtg
     2881 ccactggcaa gatcgagccg ttgaatctgc ccgccagcaa agtttggcgc ctgaatggtt
     2941 ggcatattca atgtgtacgg caggaccggt ggttggagcg tgtcccagct aaacccgcca
     3001 ctgttgcaga cataaagcgc gccatctgga ccaaccgcac atccgttggg ggagccaccc
     3061 agtgcaattg atttgggcgg aagaaacttt ccgggattag caggatcagg cgggaaatgc
     3121 agcaccgcgc ccgccttcac atcagcgcag atcaggctgc cgtccgcaag atataccggg
     3181 ccttctggat agcccagccc ggatgcgacc tcaacaaagg cagattgtcg aagactcaca
     3241 attttcttcc ttcgtcttta tgcgtttatg cgtgcgccgc gtgcagggtc ttcaggcatc
     3301 cgcacacttt ttccacggtt tccgcggagc ggcagaaacc catcacgatt ttttcaaagt
     3361 gttccaaagt gtaacccggc gcatattcct gaatggaagc cagcgctttg agtgactctt
     3421 ccttcttccc caagcggcag agcgcttcag cgtaaagcac cacgtgcagc gtatagccgg
     3481 gctgcagttc tacggcgcgg cgcgcacttt ccgcagcacc cccataattg cccagccgca
     3541 gttgtgccac cgccaaaaac tgtgaccagt agggcactga aggatggtca ggggcatcgg
     3601 ccagcaactg catcaggatt tcctgcccga gcagcacttc cttttcccca cccgcgctca
     3661 cgtgaccaag accaagatac ccccaggcca ccagatcaaa gggggcaatt ttcacggcgc
     3721 gttgcagcac ctgcacggcc ttttcataca tgccgttctg cagccatata ccggagcacc
     3781 aggccagcac ttcagattcg tttggagcca gcttgaccgc tgtgtcagca gcaccgagcg
     3841 cctcagccca gtctgcttcc ggcgtcttcg acatgccatg aagcacgctc tgcagaagac
     3901 acatgctcag gtaggcatag gcggcgccat aattgggatc gagttccaat gcgcgacgga
     3961 gcatgagcat ggcttgttga ataccggccg gactgaactc gtagttgtaa atgtgatacg
     4021 ccttgcgcac cagtccccag gcatcaaggt tctcggtggg tgttcgatag gcaaaatcag
     4081 tgaccacgcg gatgagttgc ccgcccaatg aacgcacaat agccttggaa atctcctcct
     4141 gcatgtcgaa gacgtccgcc atcatacgat cgtatttttg ggtccagacg atgcgttctt
     4201 cgattgtgtc taccagttcc acggagacgc gaattctctg ccctgaatgc cggatctcgc
     4261 cggtaaccac ataacgggta ttcagcgtac ggccgatgcc caccgggtcg gccgcatcgc
     4321 tgcccagctt gaatgatgct ctttggggag ctactcgcag gcccggcacg cccgtgagcg
     4381 cgtggatcac ttcagaagcc aggccttccg ccaggaagtt atcgtcctct cccgcgccga
     4441 tggccctaaa ccgcagcacg gcaatggaag ttcgctccga gccaataacc ggaggtactg
     4501 cgcctgcaac cccctgtgat tcaacaacgg ttgcttgagc cggcgtgggt gcgctccgcg
     4561 caatcgtggt gcgcgacggg ggtaaaggcc gggtgtactc cctgagcgcg tgaatcacat
     4621 cgatcatgtt gtgaaagcga tcatccggct tcttggcaag cgcctgcagg attgtggcgg
     4681 cgagccgctc cggaatctcc ggccgaagct gccgcggagg attaggggct gagtcctgga
     4741 tggcgcgaat gagcgcgacg gggttgggcg cgtggaaagg gagtcgccca gtgagcatct
     4801 ggttgaggat cacgccaaac gaaaatatat cagcacggtg atccaccgtc tcggcgcggg
     4861 cctgttcggg cgccatgtag gcgatggtcc ccactacctt atcgccaaaa atgctcagcg
     4921 tgcgggtagc cgcgtcagtg ggcttttcca ccagcttggc aagcccgaaa tccagaatct
     4981 tgacccgtcc gttcgccgtg attagaacat tgcccggctt gagatcgcga tgcacgattc
     5041 cggcggcatg agccgccgca acgccttcgg cgatctggat ggcaagttca accgcctttt
     5101 caaccgcaaa cccttgttct ggaatcaggt tgttcagcgt ctgaccagcc agatactcca
     5161 tgacaatgcc agccagccct ttttcatgga tgacgtcgta gattgtgaca atagccggat
     5221 ggttcaaggc ggaggcaagg cgcgcctcgc gacggaaagc ctcttccagc gtgggattca
     5281 gtatctcagg ggggatgacc ttgagcgcga catcgcggtc cagctgagtg tcatgggctt
     5341 tatagaccac gcccatccca ccagcgccga gctgcgcctc gattacgtaa tgtcccagcg
     5401 tctgcccgag cattcacggc ctccagcgcg agcgtttctg ttagaacttc ggcgactgcc
     5461 aggaatcaac agactttacc tgctgcgaag tggcgtttcg cacacggtta gtttcggttg
     5521 ataaacagtc ggctcccaac ctggttgtga cggaggtttc gctacgagcg catggattgc
     5581 ccggaagaag ctgcaaaaca agactctgaa aacttaactg gatggatccc gtcttcagat
     5641 acctggatgg acagctcact acgcgataca gtgaagtcgc ccgtcaatgc gacacttgcg
     5701 cagtgtgcac tggtgctgtc agtacgcctg gaaccggggc catgtgcact tattgcggcg
     5761 atagtagcat aaagaaaggc agagttggcg tataaagtgg cactcaagca tgattcggat
     5821 gagctggctg ccgattttgc ggctgtttag cagagattag ccgtgttacg ttaagtcgct
     5881 tcctcagaac cttatttgct cgcgcctacc agtacagccc tcgatcagcc accttcggct
     5941 tatgctccgc gacaaccaac cctggctcct ggagcgcctt tcgtgcctgg gcgatcttct
     6001 cctgcgtata ggtcgagagc gattggaatt ggattcccat gccccagtcg ggatcgctta
     6061 cctgcaccac accggcgact tcaaaagact ggtgccccag gttcaactta accaccacag
     6121 aggtatctgt aggcagcacc gcagtggttt caacgatcgc gcacgtcggc gaaagttcca
     6181 gaacctgagc gaagaccgta tggccgtacc cttcagcccg aatgctggcc gtggcctgca
     6241 tctgccggat ttgcgcctca tcacctgcgg attgcaccag cggcagaccg ctgcgaagcg
     6301 tccttacatc ccggaccagg tctggcctgt cttcgggcag ctccacgccc catatgctcc
     6361 tgcccgccag gagggtcttg gtgccgatct ggccggccat catggtgccg ggtgctccta
     6421 cccagaacac aaaaaatttg gcgcgtgccg cgccgcgctg caattcaata gtttcgccag
     6481 gcgtcaccgg aagatagagt ccgccgattc gggcggaatc tgacgtcaga tcgagcgtgt
     6541 gcgctgcctg cttctgtgta ccattcttca gaatcaaagt tagcggaaga actactttgg
     6601 tcctgaagga gctgcgtttt tgcattgacc gttctcctcc ttaccggcgc tccgtcagcg
     6661 ctccgcgaga gggtcgttgt ccaatatagt acctgtactt aggtacatgt accaagtgcc
     6721 attttcgcaa cggagtgaaa ctttagtaat tagaagattt aatctgcatt gattgaaaaa
     6781 gaaggactta ggcgatttca ggcgcttgca ccagcgggat acaccagcag acggttcttt
     6841 tcccgggtct tgcggtccca ttgctgcttg attgaagcca aaaggaccat agcgagcgtg
     6901 atccccagca gccccaaact ggctatcccg attccaacac cgttccgagg caggatatga
     6961 agacggccgt aaacaaactc aatgtgcacc caatacacaa gcaatgaatg ctgaccgagc
     7021 agatttagcg ctcgccaacc ggtgaagacc ggacggaggc gggtgcgcgc ttcacagaat
     7081 gcaagaatga tcagcaatat tccgagccgg atcaggaaga agtcagggct ggtgtgccag
     7141 aagtcataaa ccgggtaaag ctgccaggga agatgatcga agccgtagcc gacgctggaa
     7201 atccccaacc ctgtcagcgc cagcaaggga accatcccgt cttcaaagcg tcgggctgtt
     7261 ttactaagaa gtaaccagcc caccaccatg cccgcaaagg cgaacgcgat ccacggaaat
     7321 atgggaaaga gccagggcgc gggctttccc atattgtgaa caccactcag gtaggactcg
     7381 atgggccacg gcagccagct tatgcgatga gtccagacga aaggagcagc catggcaacc
     7441 agagcggcgg caaaagcaga cttc
//
LOCUS       DASQYP010000299        12450 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_95859, whole genome shotgun sequence.
ACCESSION   DASQYP010000299 DASQYP010000000
VERSION     DASQYP010000299.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 12450)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12450)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12450
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_95859"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..486
                     /locus_tag="VE783_09605"
     CDS             <1..486
                     /locus_tag="VE783_09605"
                     /inference="COORDINATES: protein motif:HMM:NF015665.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-glucose/GDP-mannose dehydrogenase family
                     protein"
                     /protein_id="HYX53695.1"
                     /translation="SSGVSLKILTAAREVNHEFCGRIMKKINGVLQSVSGKQVGLLGL
                     AFKPNTNSVAHSGSIRLARALMDGGAQVRAYDPIAMPDAQQELTGNNVRYCDSAYSVA
                     EGTDAIVLGTGWPEFRTLDFDRIKRIVRRPVVVDTKNLLDGARMKAMGFEYLGVGRLA
                     V"
     gene            590..1168
                     /locus_tag="VE783_09610"
     CDS             590..1168
                     /locus_tag="VE783_09610"
                     /EC_number="3.2.2.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005934810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008725 - DNA-3-methyladenine glycosylase
                     activity [Evidence IEA];
                     GO_process: GO:0006284 - base-excision repair [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-3-methyladenine glycosylase I"
                     /protein_id="HYX53696.1"
                     /translation="MQAQVQNDEKPRCGWASTPAMIAYHDQEWGVPQHDDQVLFEFLI
                     LEGAQAGLSWSTILAKRDAYRREFSQFDPVKVARYGAPQISRLMADAGIVRNRLKIEA
                     AIANARAFLAVQKEFGSFDRYVWEFVGGGPIVNHWRTLKDVPAETGESKALSKDLRQR
                     GFKFVGSTICYAFMQAVGMVDDHLVTCFRRKS"
     gene            complement(1177..2508)
                     /locus_tag="VE783_09615"
     CDS             complement(1177..2508)
                     /locus_tag="VE783_09615"
                     /inference="COORDINATES: protein motif:HMM:NF012385.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008134 - transcription factor binding
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma 54-interacting transcriptional regulator"
                     /protein_id="HYX53697.1"
                     /translation="MPASRGQNIASPQAELDMSHLVMRSESLKRVLKLAEKVAKHPAA
                     VLIIGETGSGKEMIARTIHNASLRAHQPWVDVNCAAIPEHLVESELFGYEKGAFSGAD
                     VTKPGMFELADKGTLFLDEIGDLDLKVQVKLLRVLDGTPYYRLGGSKKISIDVRVVAA
                     TNRQLEDLVSAGRFRSDLYHRLAQFKLEVPALRDRPEDVLGIAEQVLHEHYPDSKFTK
                     DAVDALLGYSWPGNVRELRNIVFRAVLQAPDAQTRITAHDLQITHATNGNGAPRPVIA
                     SGDLDKVKKQMIFQALEQSGGNQGRAAEALGISRRTLIRKLKTYKEQSETPASGTLSE
                     DQQRYYRVHLALPVRLRYANEQLQGTLLNLSMGGAGLKTERPLNIGSPLTLVFTLPGL
                     KSESELTARVTWNNKDGNHGLQFGELPASLRTTLQRWLREEMKKDGWKLED"
     gene            2811..4916
                     /locus_tag="VE783_09620"
     CDS             2811..4916
                     /locus_tag="VE783_09620"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: protein motif:HMM:NF017464.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008237 - metallopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M13 family metallopeptidase"
                     /protein_id="HYX53698.1"
                     /translation="MRFIQSVMLVFVLALIASAQAGAPAKKKSGTKTAAATAATTPSS
                     EAKPATRPKSFDLDAMDKTANPCEDFYQYACGNWRKNNPIPSDQARWGRFNELAEYNR
                     SILHQILEKDSANNSKRNPVQQKIGDMYESCMDEAIVNKKGAAPIKPELDKIAAISNK
                     DQLMQTIANMHSMGMPALFGFGAGADLHNASMMIANISQGGLGLPDRDYYLAQDAKSK
                     ETRDKYLEHVAEMFTLLGDNADTAKKEAQTVMDIETKLADAAMERVKMRDPKNRDHKM
                     KVSELEGVAPNFEFARFFASTGAPSFTEVNVVPPDFFQKVSPVIDSVPMADWKTYLRW
                     HAVHSAAPYLSDPFVNANFKFYGQYLSGQKELQARWKRCVQTTDGLLGEALGQPYVDE
                     TFGTEGKQRMLQLVHNVEGSLGEDIQNLDWMTPETKKQAAVKLQAITNKIGYPDKWRD
                     YGTVNIVRGDLLGNVQRARGFEVKRNWNKIGKPLDKKEWGMSPPTVNAYYSAANNDIN
                     FPAGILQPPFFDKNVDEAVNYGGIGVVIGHELTHGFDDQGSKFNAEGNLSNWWTDADR
                     QEFEKRTGCIADEYSKFVPVDDVHLNGRLTLGENTADNGGSHVALLALRKQIEKDPKL
                     AAKKEGFDADQRFWIGFAQVWCENRSDESARLLAKTDPHSPGQFRVVGTVQNSADFAK
                     AFGCKPGQKMVSENACHVW"
     gene            complement(4985..6343)
                     /gene="glmM"
                     /locus_tag="VE783_09625"
     CDS             complement(4985..6343)
                     /gene="glmM"
                     /locus_tag="VE783_09625"
                     /EC_number="5.4.2.10"
                     /inference="COORDINATES: protein motif:HMM:TIGR01455.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008966 - phosphoglucosamine mutase
                     activity [Evidence IEA];
                     GO_process: GO:0009103 - lipopolysaccharide biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglucosamine mutase"
                     /protein_id="HYX53699.1"
                     /translation="MRKLFGTDGIRGVAGEYPLDKATVFNIGRALGDHLPAGPRRVVI
                     GQDTRDSSAWIAEMLSSGLGAAKVEVASAGVITTPGVAYITHTQKFSAGVVISASHNP
                     WRDNGIKVFGPDGFKLPDSTELEIEKEIFALAEKGDGFVGGMVTDGQKQAELRGAYIN
                     WLARPIARAEKLKVVVDCANGAASAIAPEVFTSCGVNAQFTHNSPSGRNINENCGALH
                     PDVVGREVVQRGADLGICFDGDADRALFTDSSGKVVNGDAVMLLLAEELKSRGELAQN
                     TVVATTMSNMGLEIALRNLGIEMRRAPVGDKYVLEEMQKTGAVLGGEQSGHIILSREA
                     TTGDGLLTAIRVLEVVCKRAKPLAELVSPLKVFPQTIKNVRVREKKPLAQLPEIMAAI
                     RKAEGELKGNGRVNVRYSGTESLARVMVEAESEQTVQRIAGEIASILEQVLGTGVAAG
                     HQ"
     gene            complement(6407..7783)
                     /gene="xseA"
                     /locus_tag="VE783_09630"
     CDS             complement(6407..7783)
                     /gene="xseA"
                     /locus_tag="VE783_09630"
                     /EC_number="3.1.11.6"
                     /inference="COORDINATES: protein motif:HMM:TIGR00237.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009318 - exodeoxyribonuclease VII
                     complex [Evidence IEA];
                     GO_function: GO:0008855 - exodeoxyribonuclease VII
                     activity [Evidence IEA];
                     GO_process: GO:0006308 - DNA catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease VII large subunit"
                     /protein_id="HYX53700.1"
                     /translation="MSSQGQLGFTFEQAPSRRIWRVADLVGAVRTTVERSYTDVWVEG
                     EISNFRPAESGHYYFTLKDGDAQLRIVMFRSQARLLRFKPENGLQIIARGRITIYDAR
                     GELQLTAEYLEPVGAGALQLAFEQLKNRLAAEGLFDADRKKPIPQLPRRIGIVTSPRG
                     AALHDMLNILARRHENVGILIYPAQVQGDGASSEVAAGVKYFNRAKNVNVIIVARGGG
                     SVEDLAAFNDEGLARTISNSALPVISAVGHETDFTICDFVADLRAPTPSAAAELVIES
                     KHRLAEHLAHLRQRLDRATRYHLVMAKGRLTELAQHGAFVRIQDFLGRREQRLDELVF
                     HLAASFNDGLRQYHRRLEVASARVRHFDFRRTLAATRTQLGAATHTMVRAMRARIAED
                     RARLNALSGKLDALSPVKILDRGYALVFDRHGALVKDAGQIAPGDHISARVSRGTFNA
                     EVKETNRE"
     gene            complement(7933..8157)
                     /locus_tag="VE783_09635"
     CDS             complement(7933..8157)
                     /locus_tag="VE783_09635"
                     /inference="COORDINATES: protein motif:HMM:NF022596.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2905 domain-containing protein"
                     /protein_id="HYX53701.1"
                     /translation="MADVGKVLLLVGGVIVLIGAVLVFAGRLNLPIGRLSGDIVYRGK
                     NTVFYFPLATSILISIILSLLLWLFGRARH"
     gene            complement(8273..9565)
                     /locus_tag="VE783_09640"
     CDS             complement(8273..9565)
                     /locus_tag="VE783_09640"
                     /inference="COORDINATES: protein motif:HMM:NF014081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HYX53702.1"
                     /translation="MLKKILIPFVLLAAIAFAQSGEKSETIALRGGKLLTVSHGTIEN
                     GVLVMQNGRISAIGGANTAIPKGAKVIDVNGMTVYPGLIDSETHLGLTEISADRMTND
                     ELEPSDEIMPHMHVADAFHAETALIPVARINGITNAIVAPAIGDTLPGQDAFIQLDGK
                     SAQEMLMVRDIALPLNFTGQQRRNQNFEQAKFPFTRMGMAAQLRQSMIDAQDYEQKLS
                     AYEKKKSSEPDKAGAPPKHDLKLEALLPYLHGQKPVVLAAEEANDVQTAMDLANEFHL
                     KIILNHLTHASSILDKIAASGFPVIVGPIWEQPKESERYDAVFRLPAEMQKKGIKIAF
                     ASYDAHQVRNLPYAAGYATAFGLPHDEALKAVTLNPAQMWGVDKDLGSLDTGKVANVV
                     VANGDPLDVRTDVKHVFIDGAEIPLVNKQTELRDRYWK"
     gene            complement(9568..10986)
                     /locus_tag="VE783_09645"
     CDS             complement(9568..10986)
                     /locus_tag="VE783_09645"
                     /inference="COORDINATES: protein motif:HMM:NF014081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase"
                     /protein_id="HYX53703.1"
                     /translation="MERRSRLFWVMLLGFCLLLIGSAIAQQQQNSQQPSPASKNPQSP
                     EKATPGENKPAPSGEASPSMKPQPAPAPKDVVIKGGTLLTVTHGRIENGSIYLHNGKI
                     AAIGKTVNAPAGATVIDATGKWVMPGIIDAHSHIALDDDVNEPTNPVTPHMMMKDAFN
                     YEDRAIYRALAGGVTTSLLLHGSANMIGGQAIVIKHKYGLGRDELLFPGAPQSIKFAS
                     GENPKRVYGSRNQMPATRMGNFEVMRQAFQEAREYMRTWDDYEAKVKKGDKDATPPKK
                     DLKLEALADILRGKLLVQIHCYRADEFLTEMAIAKEFGYKIRAFHHALEAYKVADKIA
                     ANGVAIATWPDWWGFKYEGWDGIPWNAAISLHKGVRVAIKSDSEDVTRRLNTEAGKVM
                     HYGNVSEEDALKMITLNPAWIIGVDDRVGSLDVGKDADITIWNNYPLGSTALVDKAII
                     DGEVFFDRSLPGTGLTHLKEVQ"
     gene            11156..11605
                     /gene="dtd"
                     /locus_tag="VE783_09650"
     CDS             11156..11605
                     /gene="dtd"
                     /locus_tag="VE783_09650"
                     /EC_number="3.1.1.96"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016290838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004045 - aminoacyl-tRNA hydrolase
                     activity [Evidence IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-aminoacyl-tRNA deacylase"
                     /protein_id="HYX53704.1"
                     /translation="MRAVIQRVARCRVQVQGETMGQIGPGLLVLLGIGQQDTEATADY
                     IAEKVLGLRVFEDNQGKMNISVQERAGDVLVVSQFTLYGDVRRGRRPSFDSAARPEMA
                     QKLYEYFVQKIRSAGLRCETGKFQAMMEVELVNSGPVTILLDSDKLF"
     gene            11662..>12450
                     /locus_tag="VE783_09655"
     CDS             11662..>12450
                     /locus_tag="VE783_09655"
                     /inference="COORDINATES: protein motif:HMM:NF017181.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53705.1"
                     /translation="MRRLLSLLLLPFTLAYSQTRPAAQPKANDETVQLLQALADAPGP
                     PGFEEPVRKLMVERMKPLSEKISYDGLGSVIAVQGSSGPRIMVDAHMDELGGMVRRVT
                     HDGYLTMQMLGGWLDQALVDQRWIILGSKGPVRAVTGIRDIHIVPAEERTKVYSRDWM
                     FLDVGAKNPAEVAAMGLEPGDPVVPDAPFSVMNGTQNYLGKGWDDRVGCAVLIAAMQK
                     LAKSPHPNQIFWTATVQEEIGLRGAHTAAEVVKPEIGIAIEGGVT"
BASE COUNT         2582 a         3628 c         3553 g         2687 t
ORIGIN      
        1 tcgtctggcg tgtcactgaa gatcctcacc gcagcccggg aagtaaacca cgagttctgc
       61 ggacgtatca tgaagaagat caacggcgtg ctccagagcg tctccggcaa gcaggttggc
      121 ctgctcggcc tggcgtttaa gccgaacacc aattcagtag cccattccgg ctcgatccgg
      181 ctggctcggg ccctcatgga tggcggcgct caggtccgcg cctatgatcc tatcgctatg
      241 cccgatgccc agcaggagct caccggaaac aacgtgcggt attgcgattc ggcctactcg
      301 gtcgctgaag gcaccgatgc catcgtcctg ggcaccggct ggcctgagtt ccgcaccctg
      361 gacttcgatc gaatcaaacg gatcgtccgt cggccagtgg tcgttgacac caagaacctg
      421 ctcgatggcg ctcgaatgaa ggccatgggc tttgaatacc ttggcgtggg acgtctcgcc
      481 gtctaagtca taccctcttc cgcaagggcc tttgcttcgc ggcgaaggcc gtttcgtttt
      541 gccatctgat aggattcccg caccacaact tcatttccag gagctcgcgg tgcaggccca
      601 ggtacagaat gacgaaaagc cacgctgtgg ctgggcctct acgccggcca tgatcgccta
      661 ccacgaccag gagtggggag tgccccagca tgatgatcaa gtgctgttcg aattcctgat
      721 cctggaaggg gcgcaagcgg gtctaagttg gtccaccatt ctcgctaagc gcgatgccta
      781 tcgccgggaa ttcagccagt ttgatcctgt aaaggtcgct cgctacggcg caccgcaaat
      841 ctctcggtta atggcagacg ccggcatcgt ccgcaaccgg ctgaagattg aagccgcgat
      901 tgccaatgcc agggcgtttc tcgccgtaca aaaagaattt ggcagctttg accgctatgt
      961 gtgggagttc gtcggcggcg gcccaattgt gaatcattgg cgcacattga aagacgtccc
     1021 agccgagacc ggcgagtcca aagcgctgag caaagacctc aggcagcgcg gcttcaaatt
     1081 tgtgggatcg acgatttgtt atgcgttcat gcaggccgtt ggcatggtag acgaccatct
     1141 ggtgacctgc ttccgccgca agtcttagca gcaagactaa tcttcgagct tccagccgtc
     1201 ctttttcatc tcctcgcgca gccagcgctg gagcgtggtg cgcaaggatg cgggcaactc
     1261 gccaaactgc aatccgtggt taccgtcctt gttgttccag gttacacggg cagtcagctc
     1321 cgactcggat tttagccccg gcaaagtgaa aaccagcgtc aagggtgaac caatgttgag
     1381 tggtctctcc gttttgagcc cggcgccccc catactcagg ttgagcaacg tgccttgaag
     1441 ctgttcgttg gcgtatctga gccggaccgg cagtgccaaa tgtacccgat agtaccgctg
     1501 ctggtcttca ctgagcgtgc cggaagcagg ggtctcactc tgttccttat aggttttcag
     1561 tttgcggatg agagtgcggc gtgagatgcc cagcgcctcc gcggcgcgtc cctgattacc
     1621 gccgctctgc tccagggcct ggaaaatcat ctgctttttc accttgtcca gatcgccgct
     1681 tgcgatcacc ggacgcggag cgccattgcc attggtggcg tgcgtaatct gcagatcgtg
     1741 cgcggtgatc cgggtctgcg catcgggagc ctggagcacg gcgcgaaaaa cgatgtttcg
     1801 caattcccgg acatttccgg gccatgaata gcccagcagc gcgtctaccg catcttttgt
     1861 gaatttcgag tcgggataat gctcatgcag cacctgctcg gcgattccca gcacgtcctc
     1921 agggcggtca cgcagcgccg gcacttccaa cttgaactgc gccagacgat gatagaggtc
     1981 actgcggaag cggccggcgc taaccagatc ttccagctgc cggttggtcg cggccaccac
     2041 ccttacgtca atagagattt tcttgctgcc gcccagccgg tagtagggcg tgccgtccaa
     2101 tacacgcagg agttttacct gtactttcag gtccaggtca ccgatttcat ccagaaagag
     2161 cgtgcctttg tcagccagct caaacatacc cggtttagtc acgtcagcgc cgctgaaagc
     2221 tcccttttcg taaccgaata gctcgctttc caccagatgt tcggggatgg cggcacagtt
     2281 tacatccacc cagggctggt gggctcggag cgaggcatta tggatggtac gggcaatcat
     2341 ctccttgcct gagcccgttt ctccaataat cagaacggcg gccgggtgct tggctacctt
     2401 ttccgccagc ttgagaacac gtttcagcga ttcgctgcgc atcaccaggt gtgacatatc
     2461 gagttcagcc tgagggctgg caatgttctg gccgcgcgaa gctggcatgg cgggaaacga
     2521 ctctttcggt tgtggcgctg tattctgcgc taatcatgtc gcaagccatc gcccgatggc
     2581 aacaacgaaa tgactggaat ctcgattatt ttcgtcgcgc agcccggagc tggcgcatcg
     2641 agaccttctc cagccgaatc cccccagaat gccgtgaggc gtggaatgtc ttattgcgat
     2701 gggtattccg gacgacctgt gccatcgagt cccggaaacg gtttacagtg acccgaaatc
     2761 ggcttagact tgctggtttt gtgtttgtat cccaccagct gaggagtaac atgcgtttta
     2821 tccaatccgt gatgttggtt tttgtgctgg cgctgattgc gtcggcccaa gccggcgctc
     2881 ccgccaagaa gaagtctgga accaagactg ctgcagccac cgcggccacc acgccttcca
     2941 gcgaggcgaa gccggccacg cgtcccaagt catttgacct ggatgcaatg gacaaaaccg
     3001 cgaatccctg cgaagacttc taccaatatg cctgcggcaa ttggcgcaaa aacaacccca
     3061 tcccttctga ccaagcacgc tggggcagat tcaatgaact tgcggaatat aaccgctcaa
     3121 tccttcacca gattctggag aaggattccg ccaacaactc taaacgcaac ccggtccagc
     3181 agaagattgg agacatgtac gagtcctgta tggatgaagc cattgtcaac aaaaagggag
     3241 cggcgccgat aaaacctgaa ttggacaaga ttgccgccat cagcaacaaa gaccagctca
     3301 tgcagaccat cgcgaatatg cacagcatgg gtatgccggc gctctttggg ttcggcgccg
     3361 gagctgacct gcacaatgcg agtatgatga tcgcgaacat cagccagggt ggccttgggc
     3421 ttccagatcg cgactactat cttgcgcagg acgccaaatc gaaagagacc cgcgacaaat
     3481 acctcgagca cgttgccgag atgtttacac tgctcggcga caacgctgat acagcgaaga
     3541 aggaagccca gaccgtcatg gacatcgaga ccaaactggc cgatgccgcc atggaacgcg
     3601 taaagatgcg cgatcccaaa aatcgcgacc acaagatgaa ggtgtctgag cttgagggtg
     3661 tcgctcccaa tttcgagttt gcccgattct ttgcatccac cggcgctccg tcatttactg
     3721 aagtgaacgt tgttcccccg gatttctttc agaaggtaag cccggtcatt gattccgttc
     3781 ccatggctga ctggaagacc tacctgcgct ggcacgctgt tcactccgcc gctccgtacc
     3841 tttctgatcc gttcgtgaac gccaacttca agttttatgg ccagtacctg agcgggcaaa
     3901 aggaactcca ggcgcgctgg aagcgctgcg tacagaccac tgacggactg ctaggcgaag
     3961 cactcggcca gccctatgtg gacgaaacct tcggtaccga ggggaagcaa cgcatgcttc
     4021 aactggtgca caacgtcgaa ggctcgctgg gtgaggacat ccagaacctt gactggatga
     4081 ctccggagac gaagaagcaa gctgcagtca agctgcaggc gatcacgaac aagatcggtt
     4141 atcccgataa gtggcgcgat tacggcacag tgaatatcgt ccgcggcgac ttgctcggca
     4201 acgtgcagcg cgcccgtggc tttgaagtga agcgcaattg gaacaagatc ggcaagccgc
     4261 tggacaaaaa agagtggggc atgagcccgc cgaccgtaaa cgcttactac agcgcagcga
     4321 acaatgacat caacttcccg gctggaatcc tgcagccgcc gtttttcgac aaaaatgttg
     4381 atgaggcggt gaactatggc ggcatcggcg tggtaatcgg ccacgaactt acccacggct
     4441 ttgacgatca aggcagcaag ttcaacgcgg aaggcaactt gagcaattgg tggactgatg
     4501 ccgaccgcca ggaatttgaa aaacgtaccg gctgcatcgc cgacgagtac agcaagttcg
     4561 tgccggtcga tgatgtgcac ctgaacggcc gcctcacgct gggcgagaac accgctgaca
     4621 acggcggcag ccacgtggct ctgctggcgt tgcgcaagca gatcgagaaa gacccgaagc
     4681 tggcagcaaa gaaagaaggc tttgacgccg accagcgctt ctggatcggc tttgcccagg
     4741 tctggtgcga gaaccgcagc gatgagagtg cacggctttt ggccaagact gatccgcact
     4801 caccgggcca gttccgcgtg gtcggcacgg tacagaacag cgctgatttt gccaaggcgt
     4861 tcggctgtaa gccgggccag aagatggtga gcgagaacgc ctgtcacgtc tggtagtaaa
     4921 actaaactta gactctggtg ccgcacccaa atggtgcggc attttttgtc tatgctctgg
     4981 ctgtttactg gtggcctgcg gcaactcccg ttcccagtac ctgttcaagt atgctcgcga
     5041 tctcgcccgc aatgcgctgc actgtctgtt ctgattcagc ttctaccatc actcgtgcca
     5101 gcgattccgt gcctgaataa cgcacattta cacggccgtt gcccttgagt tcgccttcag
     5161 ctttgcggat cgcagccatt atctccggaa gttgcgcaag cggcttcttc tcgcggacac
     5221 gcacgttctt gatggtctga gggaagacct tgagcgggct caccagttca gcgagcggct
     5281 ttgcccgttt gcaaaccacc tcaagaacac ggatcgccgt gagtagtccg tctccggtgg
     5341 tcgcttctcg ggagagaatg atgtggccgg attgctcgcc gcccaggaca gctccggtct
     5401 tctgcatctc ttccagcacg tacttgtctc ccaccggggc gcgccgcatc tcaattccaa
     5461 gattgcgaag cgcaatctca agtcccatgt tggacatggt cgtggcgacc acggtgttct
     5521 gcgccagttc tcctcgggat ttcaactcct ccgccaagag cagcattact gcatcgccat
     5581 tcactacttt cccgcttgaa tcagtgaata gcgcccggtc ggcatcgcca tcgaagcaaa
     5641 tgcccagatc cgcgccgcgc tgcaccacct ctctgcccac cacatcaggg tgaagggccc
     5701 cgcagttctc gttgatgttc cggccactgg gagagttatg ggtgaactgc gcgtttacgc
     5761 cgcagctcgt aaagacctca ggcgcgatgg cactggctgc gccgttggca caatcgacca
     5821 ctaccttgag cttctctgca cgcgcaatcg gtcgcgccag ccagttgatg tatgcgccgc
     5881 gaagctcggc ctgcttttgg ccatcggtga ccattccgcc gacgaagccg tcacccttct
     5941 ccgccagcgc aaagatctct ttttcaattt cgagttcggt tgaatcggga agcttgaatc
     6001 cgtctggacc aaagaccttg atgccgttat cgcgccatgg attgtgagag gccgagatca
     6061 ccacacctgc agaaaacttt tgcgtatgcg tgatatacgc cacccccggg gtggtaatca
     6121 ctccggcgct cgcgacctcg accttcgccg cccccagtcc agatgacagc atctctgcaa
     6181 tccacgcgct tgagtcgcgt gtgtcctgcc cgatgacaac gcgtcgcggg cctgcgggaa
     6241 ggtgatctcc cagcgcacgc ccaatattga aaactgtcgc cttgtcgagc gggtattctc
     6301 ctgctacccc gcggattcca tcggtgccga aaagttttct catcgttgcc tgccagtttg
     6361 ttcgaatgtg ccagcggacc gggggagtca gtcaggcaga ttgccattat tccctgttcg
     6421 tttcctttac ttctgcatta aatgtaccgc gagacacgcg ggcggagata tgatcgccgg
     6481 gcgcaatctg tccagcatcc ttcaccagtg ctccatggcg gtcgaaaacc agcgcataac
     6541 cgcggtcgag gatcttgacc ggcgagagtg catccagctt tccggaaagc gcattcaatc
     6601 gggctcggtc ttcagcgatg cgggcacgca tggcccggac catggtgtgg gttgcggcac
     6661 caagctgcgt gcgggtagcc gcaagcgtgc gtcgaaaatc aaaatgccgt acccgcgctg
     6721 aagccacttc gagccggcga tgatactggc gcaagccgtc attgaaactc gccgccaaat
     6781 ggaagacgag ttcatccagc cgctgctcgc gacggcctag aaaatcctgg atgcggacga
     6841 acgcgccgtg ctgggccaat tccgtaagtc gacctttggc catgaccagg tgataacgcg
     6901 tggcccggtc gagccgctgt cgcaggtggg ccaggtgttc ggccaggcgg tgcttggatt
     6961 cgattacaag ctctgcagcg gcggatggag ttggcgctcg cagatcggcg acgaaatcgc
     7021 agatggtgaa gtcggtttcg tgcccgactg cggagatcac cggcaaggcg gagttggaga
     7081 tcgttcgcgc cagcccctca tcgttgaacg cggccagatc ctccacggaa ccgccgccac
     7141 gcgccacgat gatcacgtta acgttcttcg cgcgattaaa gtacttcact ccggcagcca
     7201 cttcgctaga ggcgccatca ccctgcacct gcgcgggata gatcaaaatg cccacgtttt
     7261 cgtgacgtcg cgccaaaatg ttgagcatgt catgcagggc ggcgccgcga ggcgaggtca
     7321 caatccctat ccgtcgcggg agctgcggga tcggcttctt gcggtcggca tcaaacagcc
     7381 cttctgcagc cagcctgttc ttaagctgtt cgaacgccaa ttgcagagcg cccgcaccca
     7441 ccggctccag atattcagct gtgagctgca gctcgccacg ggcgtcataa atggtgattc
     7501 ttccacgggc gatgatctgg agcccgtttt ctggtttgaa tcgcaggagc cgggcctgac
     7561 tgcgaaacat cacgattctg agctgggcgt cgccatcttt cagagtgaag taataatggc
     7621 ccgattcggc ggggcggaag ttggagatct ccccttccac ccaaacatcg gtgtagctgc
     7681 gctccactgt ggttcgcacg gcgcctacga ggtcggcaac ccgccatatg cggcgggacg
     7741 gggcctgctc gaaggtgaag cctagttgtc cctgggaaga catccaaagg cagtttatca
     7801 ggagagcttt tgcccagcat tcggtggctc aagtgctcca gcgacatcct cagtatctct
     7861 catagcaatc cggtacaaat tgacccacga ggaagcagag cgagtgccaa acaagccttt
     7921 tcgagacaaa catcagtgcc gggcgcgccc aaacagccac aacagcaacg aaagaatgat
     7981 gctgatgaga atgctggtgg cgagggggaa gtaaaacacc gtgtttttgc cgcgatagac
     8041 gatgtcgccc gacaatctgc cgatgggcaa gttcaagcgg cctgcaaata ccagcacagc
     8101 gcctatcaag acgataacgc cgccgaccag cagcagcacc ttacccacat ccgccatgcg
     8161 aatattctag tctctcggtg gaccgctgag gatcgcagcg cgaaagggcc gcacgcgtcg
     8221 cgcaaaataa gaaagccgga ggcatttgcc tccggcccat tacctcaaga aactacttcc
     8281 agtagcggtc gcgcagttca gtctgtttgt ttaccagcgg aatctctgcg ccatcgatga
     8341 agacgtgctt cacgtcagtc ctcacatcga gcggatcacc gttggctacc accacgttag
     8401 ccaccttgcc ggtatcaagc gagccaaggt ccttgtccac gccccacatc tgcgcgggat
     8461 tcagcgtgac ggcctttaga gcctcgtcat gcggaaggcc aaaagccgtc gcatatccgg
     8521 cagcgtaagg caggttacgg acctgatgcg cgtcatagga agcgaacgcg atcttgatgc
     8581 cctttttctg catttctgcc ggtagcctga agacagcatc atagcgttca ctctctttcg
     8641 gctgctccca gattggtcca acgatcacag ggaagccgct ggcggcaatc ttgtccagga
     8701 tggaagaggc atgcgttagg tggttgagga tgatcttcaa atggaactcg tttgcaaggt
     8761 ccattgcggt ctgtacgtca ttggcctctt ccgccgccag caccaccggt ttttgaccat
     8821 gcaaatacgg cagcagcgct tccaatttca ggtcatgctt gggcggagca ccggctttgt
     8881 ctggctcaga cgacttcttc ttttcgtagg cgctcagctt ctgctcatag tcctgagcat
     8941 cgatcattga ctgccgaagc tgggcagcca ttcccatgcg agtgaagggg aacttggctt
     9001 gctcgaaatt ttgattccgg cgctgctgtc cagtaaagtt cagcggcagg gcaatgtcgc
     9061 gaaccatcag catctcctgc gctgacttgc catccagctg gatgaaggca tcctggcccg
     9121 gcagcgtgtc tccaatcgca ggagccacaa tggcgttggt gatgccgttg atgcgcgcca
     9181 ccggaatcag cgccgtttcc gcgtgaaacg cgtcagccac gtgcatgtgc ggcatgatct
     9241 cgtcgctcgg ctccagctcg tcgttggtca tgcgatcggc agagatttct gtcaggccca
     9301 ggtgcgtctc ggaatcgatc agcccgggat aaacggtcat cccattaacg tcaattacct
     9361 tggccccctt gggaatcgcg gtgttcgcac cgccaatggc agagatgcgg ccgttctgca
     9421 tcaccaggac gccgttttcg atggtgccat gcgagaccgt aagcagcttg ccaccccgca
     9481 gggcgatggt ctctgatttc tcacccgatt gcgcaaaagc aatggcggcc agcaacacaa
     9541 atgggatcag tatctttttc agcatggcta ctggacctcc ttcaggtgag tcaatcccgt
     9601 accaggaagg gagcggtcga agaatacctc gccatcaatg atcgccttgt cgaccagtgc
     9661 ggttgagccc agcgggtagt tgttccagat ggtgatgtcc gcatcctttc ccacgtccag
     9721 cgagcccaca cggtcgtcca ccccgatgat ccacgccgga ttgagcgtga tcattttcag
     9781 tgcgtcttct tcgctcacgt tgccgtagtg catcactttg cctgcttcgg tgttcaaccg
     9841 gcgggtcacg tcttccgagt cgctcttgat ggcgacgcgc acgcctttat ggagggaaat
     9901 ggcagcgttc catggaatgc cgtcccagcc ttcatacttg aagccccacc aatccggcca
     9961 ggtagcgatg gcaactccgt tggcggcaat cttgtccgcc accttgtacg cttccagggc
    10021 atggtggaag gcgcgtattt tgtaaccgaa ttctttggca atagccattt cggtcaggaa
    10081 ttcgtcagcg cgatagcagt ggatttgaac caacagcttt ccgcgaagga tatctgccag
    10141 cgcctccagc ttcaggtctt tcttgggcgg cgtggcatcc ttgtcgccct tcttgacctt
    10201 tgcttcatag tcgtcccagg tccgcatgta ttcgcgggct tcctggaatg cctgccgcat
    10261 cacctcaaag ttccccatgc gcgtggcggg catctggttg cggctgccat agacccgctt
    10321 tgggttctcg ccgctggcga acttgatgga ctgcggcgct ccggggaaga gcaactcgtc
    10381 acggccgaga ccatacttgt gcttgatgac gatcgcctga ccaccgatca tattggccga
    10441 accatgcagc agcagtgagg tcgtcacgcc gccggccagc gcacgataga tcgcccggtc
    10501 ttcgtagttg aaggcatctt tcatcatcat gtgcggcgtc accgggttgg tgggctcgtt
    10561 cacgtcgtca tcgagagcga tgtgcgagtg cgcgtcaatg attccgggca ttacccactt
    10621 gcctgtggca tcaatcaccg tggccccggc cggagcgttt acagttttgc cgatcgcggc
    10681 gatctttcca ttgtgcaggt agatgctgcc attctcgatg cgaccatgcg ttaccgtcag
    10741 cagcgtaccg cctttgatga ccacgtcctt cggcgccggc gcgggctgcg gcttcatgga
    10801 aggagaggct tcgcccgagg gcgctggctt gttctctccg ggagtggctt tctccggact
    10861 ttggggattt tttgacgctg gagatggctg ttgcgaattc tgttgctgct gagctatcgc
    10921 cgatccaatc aacagcaggc agaatccgag cagcatcacc cagaaaagac gcgagcgacg
    10981 ctccatgttg ggaactcctt tgtgggaggg aaatgagaac ggaggatttt atgggccact
    11041 caactctgag tcaatcagcg gcttacttcg cgacgaaaat gtgcaacggc taaatctgat
    11101 ttagacgtga agagcaaaag aaggtaacca gcgcggttta ttatgatgcg cacgtatgag
    11161 agctgtgatc cagcgcgttg ctcgctgccg tgtgcaagtg caaggggaaa ccatgggcca
    11221 gatcggcccg ggtctgctgg tgctgctggg aatcggccag caggatactg aagccaccgc
    11281 ggactacatt gcggagaagg tattggggct gcgcgtcttc gaagacaatc agggtaagat
    11341 gaatatctct gtgcaggaaa gagccggcga tgtcctggtc gtgagccagt tcactctcta
    11401 tggcgatgtc cgccgcgggc gaagaccctc cttcgactcg gccgccaggc cggagatggc
    11461 gcagaagctg tacgaatatt ttgtccagaa gatccgctca gccggcctgc gctgcgaaac
    11521 cggaaagttc caggccatga tggaagtgga actggttaac tccgggcccg tgacgatcct
    11581 gctcgattcc gacaagctgt tctgagtcca gacactcccg ttttccattt caaaaggcat
    11641 ggggtatatg attgcccgtt tatgagacgc ctgctttccc ttctgctact gcctttcacg
    11701 ctcgcttatt cgcaaactcg tcctgctgcg cagcccaaag caaatgatga aacggtccag
    11761 cttctgcaag cccttgcaga tgctcccggt cctcctggtt ttgaagagcc agttcgcaag
    11821 ctgatggtcg agcgtatgaa gccgctttct gagaagatca gctacgacgg cctgggttca
    11881 gtgatcgccg ttcagggctc cagcgggccg cgcatcatgg tggacgcgca catggacgag
    11941 ctcgggggca tggtgcgtcg tgtcacgcac gacgggtatc tcaccatgca gatgctcggt
    12001 gggtggctgg accaggccct tgtggaccag cgctggatca ttctgggctc caaagggccg
    12061 gtgcgtgcgg tgaccggaat ccgcgatatc catattgtgc ccgccgagga acgcacgaag
    12121 gtctattcgc gggattggat gtttctggat gtcggagcta aaaatcctgc ggaagtcgcc
    12181 gccatggggc tggaacctgg cgatcctgtt gttccggacg cgccattctc cgttatgaat
    12241 ggcacccaga attatctcgg caagggctgg gacgatcgtg tcgggtgcgc cgttctgatt
    12301 gcggccatgc agaagctggc caagtcgcct catccgaacc agatcttctg gaccgcaaca
    12361 gttcaggaag agattggcct gcgcggcgcg cacacagccg cggaggttgt caaaccggag
    12421 atcggcattg caattgaagg gggcgtcacg
//
LOCUS       DASQYP010000300        13751 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_188761, whole genome shotgun sequence.
ACCESSION   DASQYP010000300 DASQYP010000000
VERSION     DASQYP010000300.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 13751)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13751)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13751
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_188761"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(14..1057)
                     /locus_tag="VE783_09660"
     CDS             complement(14..1057)
                     /locus_tag="VE783_09660"
                     /inference="COORDINATES: protein motif:HMM:NF025006.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxypeptidase regulatory-like
                     domain-containing protein"
                     /protein_id="HYX53706.1"
                     /translation="MRFRSPHVLFPCFVLLFALAQTSFAQFGAMPSMSDRGPDTHFNH
                     MGHEMSSLSGTVVSMAGEHPLGNVKVDLSEGATGKPVSTTYTDNAGSFSFSGVSSGNY
                     LITATAGLVQVSDRIDISATAAPVTLRVPDKQSAADRAGADSNTVSVAQMRVPEKARA
                     ELAKAQELSSKGKLDDAQKHLAKSLEIFPDYADALTFRAVMRLSSDLPGAEADLQHAI
                     KADGNYAMAYTVLGAALNAQGKFDQALNTLNRAISLAPMAWQNFFEMAKAYDATAKYQ
                     EGLQHIQKAFSLTAEIFPPMLLLRAHCLMGVHEFGNAVTDLEAFLKKDPSGANADTAR
                     HLLAQAQQMMAKK"
     gene            1286..2557
                     /gene="aroA"
                     /locus_tag="VE783_09665"
     CDS             1286..2557
                     /gene="aroA"
                     /locus_tag="VE783_09665"
                     /EC_number="2.5.1.19"
                     /inference="COORDINATES: protein motif:HMM:NF012497.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003866 - 3-phosphoshikimate
                     1-carboxyvinyltransferase activity [Evidence IEA];
                     GO_process: GO:0009423 - chorismate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-phosphoshikimate 1-carboxyvinyltransferase"
                     /protein_id="HYX53707.1"
                     /translation="MIIKPAKNVLGSIRLPGDKSVSHRYAMLGALAEGTTHLSNFSTG
                     ADCASTLSCLRQLGTQVRVNGTKVEIDGRERLQQPSASLDCGNSGSTMRMMAGILAGH
                     AFTCEMHGDESLSRRPMGRVMTPLRQMGAEITSAAGDRPPLKIKGGNLHGMDYVSQVA
                     SAQVKSAVLFAGLFASGETSYEEPYRTRDHSEQALRAFGVELSRAKNKVRIAGGQKLK
                     AIEAAIPGDISSASFFMCAAALFPESNLVIDGLLLNPTRAGLLDVLKIMGAKISVINL
                     EEQNGELVGTVKIENGVLRGATISGGQSAALIDELPVLAAIGPYTHDGIEIRDAKELR
                     VKESDRIALVARNLRAMGAECEEREDGLRVPGGQKLHGATIDPAGDHRIAMAFAVAAL
                     RAEGETEIKGDDAARISFPEFFTMLNGVVER"
     gene            2640..3461
                     /gene="pheA"
                     /locus_tag="VE783_09670"
     CDS             2640..3461
                     /gene="pheA"
                     /locus_tag="VE783_09670"
                     /EC_number="4.2.1.51"
                     /inference="COORDINATES: protein motif:HMM:NF008865.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004664 - prephenate dehydratase activity
                     [Evidence IEA];
                     GO_process: GO:0009094 - L-phenylalanine biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prephenate dehydratase"
                     /protein_id="HYX53708.1"
                     /translation="MKVAIQGERGAFSHQAALKLIQGADVVACGRSIEVFDHLDAGHV
                     RAAVIPVENTLAGPVGEHLDLLLERDIFVHRELLLRIEHNLIAAPGTKLKDLRQVLSH
                     PVALDQCRKFFRTHKKISAVSFYDTAGSVKHVVGKKLRDAAGIASAQAAREYGGKILI
                     SNLEDDHRNVTRFFLIQKSRKVDSQADKTSLVFSLRNEAGALFKALSVFALRDLDLSK
                     IESRPVRGRPWEYRFFVDVLCGDEPRMRLALRHLEEIAGMVKVLGIYRRAEPAKF"
     gene            3717..6173
                     /gene="lon"
                     /locus_tag="VE783_09675"
     CDS             3717..6173
                     /gene="lon"
                     /locus_tag="VE783_09675"
                     /EC_number="3.4.21.53"
                     /inference="COORDINATES: protein motif:HMM:TIGR00763.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="endopeptidase La"
                     /protein_id="HYX53709.1"
                     /translation="MASETPNTLNPLQGSSEFERQLFEGEKKGVPILPVRDTVLFPHA
                     VLPLTVGRESSINLINSLGDEKTILVVAQREARVDSPQPTDLYNIGTLATVHKVVKMP
                     NQSLFVFTEGLQRGKLGEFTQLTPFMRANVEFLPEEEEAAGEASPEIEALQRNVLTLF
                     QQIVAGSPTLSDELQTVAINIEEPGRLVDFVASSLPFLSTKDKQEILETADVYRRLKA
                     INQHLAKELEVQQLRNKIQTEVQDQVQQSQREYYLREQMKAIQKELGEQDEAQRDVED
                     LKQKIEAAGMPEEVKKEALKELSRLGRMSPMAADYSVTRNYIEWLAVLPWAKSSGVEV
                     DITKAHEILDADHYDLKKVKDRILDYLSVRRLKPNMKGPILCFVGPPGVGKTSLGRSI
                     ARALERKFVRLSLGGVHDEAEIRGHRRTYIGALPGQIIQGIRRAETNDPVFVLDEVDK
                     LGRDFRGDPSSALLETLDPEQNSTFRDNYLDVPFDLSKVLFICTANMLDTIPEPLRDR
                     MEIIELQGYTEDDKYHIAQRYLIPKQIEENGLTAEQIEISEDSVRFVIRHYTREAGVR
                     NLERNIGTLCRKQARRIAEGKTDKLVVTRETVQEFLGGIKIRIDTEIAERTKRPGVAV
                     GLAWTPSGGDILFVEANKMKGKGGFNMTGQLGEVMRESMQAALTWVRSNAEKLGISDE
                     IFKDSDIHVHVPAGAIPKDGPSAGVTMVTALVSLLCDRPVHPLTGMTGEITLSGNVLP
                     IGGVKEKFLAAKRAGVKDIIFPADNRMNVEEDLTPEQVEGVNVHFVSTIEEVLAIALP
                     SSKQEERQDAETREKVLTSV"
     gene            6463..7941
                     /locus_tag="VE783_09680"
     CDS             6463..7941
                     /locus_tag="VE783_09680"
                     /inference="COORDINATES: protein motif:HMM:NF024909.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VWA domain-containing protein"
                     /protein_id="HYX53710.1"
                     /translation="MKQPRIAEQIAGLERYLSVAQNSILRQDALEVLIWDYLRMGSVR
                     HVQERAQDLLKLDPANPVAQAALEEQGAAPPTVQAKSKNKSHQSQKVIAAQAALIALE
                     QLRKPEGMEPQDFAALRRRVESRLNGTLGLDYVEDEEYQLARTPLQQAVAVDPGNPQY
                     AYALGLALLNSKDPDQQSAFLYLARAVNLTQGTAQGAPIAEFARKQYQKAGGNDGDWS
                     RYLAAAVVPSGTLQSASTAAVAANAPASVTPGKATQAIMASGAGSPNAQQNTSVVAKN
                     TPPPNPASGSGNSGSTRSDAVPRRTPEPVYQPRLQLSAPTAPLSLGIMIQTSLLTNHN
                     RPAIIATLKEIVSHLRADDEAAILVFSNQLDFEQDLTANDALLEQAMSTLRPRPGRAL
                     LDGIAFAAGHLKRIGKNSNRVLLVISDGNSSNNKESLPVTSEISGVRIDCVGLNADGD
                     SQRQLLSRLAAYSGGQASFANDPQQFRVAALTMTQQLGLPVR"
     gene            8236..8955
                     /locus_tag="VE783_09685"
     CDS             8236..8955
                     /locus_tag="VE783_09685"
                     /inference="COORDINATES: protein motif:HMM:NF014448.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006777 - Mo-molybdopterin cofactor
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum cofactor biosynthesis protein MoaE"
                     /protein_id="HYX53711.1"
                     /translation="MRIHVLLFGQLKDIVGRSEDYLTLEPGARLSAVIAHYGGQFPNL
                     LGLAGSIACSVNQEYAAVSSELHEGDEVGLLPPVSGGKGIANPVQELRSAHCAIVREP
                     IDYAKVRQSLSHPEDGSVILFDGVVRNNTRGRKTLYLDYESYESMALNEMEKLAHAAL
                     ERFKVRDVALVHRLGRLQIGETSVLIGVASAHRAAAYEASRWLIDTLKKTVPIWKKEY
                     FEDGAVWADGEPFPEEIRRGK"
     gene            9007..9969
                     /locus_tag="VE783_09690"
     CDS             9007..9969
                     /locus_tag="VE783_09690"
                     /inference="COORDINATES: protein motif:HMM:TIGR03436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VWA domain-containing protein"
                     /protein_id="HYX53712.1"
                     /translation="MTITPAVPQRFGVACLLMLALSVGAQEPHRAAADQQKSQEPVYR
                     VNVRLVNVFTTVTDSHGAPIADLAKDDFKIFEDGQEQDIRVFERESELPLSIVLAVDT
                     SPSTERDFKLEVVSAKKFARSIVRPVDRLSVFQVTANIDQVTPFTPDLRRIDRGIDAL
                     HVGPGTSLYDAIFLSSEALMDREGRKVLVLITDGGDTTSKADYQAALKRAQQAEAIVY
                     SIIVVPVEADAGRNLGGEHALIQISKDTGGKYYYAESVRELDDAFQQVSKELRTQYLI
                     AYYPSRKLSDSPFRRIKVEVAKKDPDGKPYLVRHRAGYFTAPAK"
     gene            10297..10575
                     /locus_tag="VE783_09695"
     CDS             10297..10575
                     /locus_tag="VE783_09695"
                     /inference="COORDINATES: protein motif:HMM:NF028518.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA chaperone Hfq"
                     /protein_id="HYX53713.1"
                     /translation="MAFRASAPAFSGKKPAKTPPPDETGMEPAYLKSLGEKQTPVMVK
                     LLSGETFRGWVEYYDSNMIRLTREGVPNLFIFKHEIMYIAEDNGRRPR"
     gene            10608..11408
                     /locus_tag="VE783_09700"
     CDS             10608..11408
                     /locus_tag="VE783_09700"
                     /EC_number="3.1.3.-"
                     /inference="COORDINATES: protein motif:HMM:NF012673.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008934 - inositol monophosphate
                     1-phosphatase activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006020 - inositol metabolic process
                     [Evidence IEA];
                     GO_process: GO:0046855 - obsolete inositol phosphate
                     dephosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="inositol monophosphatase family protein"
                     /protein_id="HYX53714.1"
                     /translation="MQDLAREAGGLLMSFFGKVTIEYKGEADLVTKADRASEEFLVSR
                     IRKLWPDHDLMGEEGSRNDTGSDYKWYIDPLDGTTNFAHGYPVFCVSLGLDFKGERIA
                     GVIYDPSRQELFAAAQGSGTTLNGNEVRVSRTARMVESLMATGFPSHKRHKNPNIHFY
                     HQLTLRSHGIRRAGSAALDLCYVACGRYDAFWEFNLNPWDTAAGVLIVQQAGGTVTNF
                     SGGPFSIDSRQVLASNSLLHKELLAEFKAIFEGRVEGLPPVAEYLAER"
     gene            11502..11708
                     /locus_tag="VE783_09705"
     CDS             11502..11708
                     /locus_tag="VE783_09705"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53715.1"
                     /translation="MIVDRWTTAFWGLIYIFIGCMWFYRFYRGTKLEQHLFTLSSPEP
                     RRMVRKDKIWAISMGCISVAMGLM"
     gene            complement(11741..12760)
                     /locus_tag="VE783_09710"
     CDS             complement(11741..12760)
                     /locus_tag="VE783_09710"
                     /EC_number="3.4.21.105"
                     /inference="COORDINATES: protein motif:HMM:NF013827.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="rhomboid family intramembrane serine protease"
                     /protein_id="HYX53716.1"
                     /translation="MAPVLCDNCAGRATRRARVGLKTGTMRDRPATTVLLAINLAVFT
                     AMVFTGAGFWDMNGSALLKWGANFGPLTLGGDYWRLVTAGFLHAGLLHIGFNMWCLWS
                     LGELSEKLFGKWQTFAIYMVTGVGGALLSTAAHPGGSEVGASGAIFGIAGALLAGVKF
                     GNLSISAGEKRAITSSMIFFVGVNFALGAGIGGAFMGGRVDNMCHLGGFVTGLLIGLP
                     LGAFAAHHKLYQWATVLITSLVLALGLNELVKTHGDDALLFRAQMAVQQDDFPKAINY
                     LERYTRTRRDDDKALIYLGALYEETHQRDKAIAAFQDALKANPNSRDAKAALSELEED
                     QPAQK"
     gene            13112..>13751
                     /locus_tag="VE783_09715"
     CDS             13112..>13751
                     /locus_tag="VE783_09715"
                     /inference="COORDINATES: protein motif:HMM:NF012897.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53717.1"
                     /translation="MNRPIAKRPDKCSFKGRILFLTEDPELIRRQLAGEDLPWDMRNP
                     ENNPKLRDDISTDEITPAHICFFFDETLGEFPYTGLKCGNEVPINRGDVKKGGFVAAV
                     SGKRRGKGSSREQSPYAELCAGIKVVIAENIERIYKQNCQNLGVLTTTDFSVIDKVRN
                     GEEIPLSKFTEGEDEITRQVIEYGGLFPFNVARMQKKTFLPPIQTGKRGMTIA"
BASE COUNT         3056 a         3783 c         4003 g         2909 t
ORIGIN      
        1 gcggatacga tttttacttc tttgccatca tctgctgggc ctgagccagc aggtggcggg
       61 ctgtatcggc gttagctcct gaaggatctt tcttcaggaa tgcttccagg tcggtaacgg
      121 cattgccaaa ctcgtgaaca cccataaggc aatgtgcacg cagtaacagc atcgggggga
      181 agatctcggc ggtaagcgag aaggctttct ggatatgttg caggccttct tggtatttcg
      241 cagtggcgtc gtacgcctta gccatctcaa agaagttctg ccaggccatg ggagcaagcg
      301 agatggcgcg attcaacgta ttcagcgcct gatcaaactt gccttgcgca ttcagcgccg
      361 cacccaggac ggtataggcc atggcatagt ttccatcggc tttaatagcg tgctgaaggt
      421 cggcctcagc gccgggaagg tcgctggaga gccgcatgac ggcacgaaag gtcagggcat
      481 cagcatagtc ggggaagatt tccagcgatt tggccagatg cttctgcgcg tcatcgagct
      541 tgcctttcga gctaagctcc tgggccttgg caagttcggc gcgtgctttt tcgggtaccc
      601 tcatctgagc caccgaaacg gtattcgagt cagcgcccgc acggtccgca gcgctttgct
      661 tgtcggggac acgaagggta accggcgctg ccgtggctga gatatcaatg cgatcggata
      721 cctgcaccag gcccgccgtg gccgtgatca ggtagtttcc gctggacact cctgaaaagg
      781 agaaagaacc ggcattgtca gtataggtag tgctcaccgg cttgccggtt gcgccttctg
      841 aaagatcgac tttcacattg ccgaggggat gttcgccggc catgctcacc accgtgccgg
      901 aaagcgaaga catttcatgg cccatgtgat tgaaatgagt gtcagggccg cgatcggaca
      961 tgctcggcat cgcgccgaac tgcgcgaacg aggtctgggc tagtgcaaac aacaggacga
     1021 agcagggaaa cagaacgtga ggcgaccgga aacgcatgat cttgggaccc gagccttgga
     1081 tttttttgaa gaggagttgc cagagcagca ggcagggaag cgttccgggt gttacctctt
     1141 acattgcgct aaacgcgcgt gctagaaggt aagatgagga agatcaatcc aagttgtctt
     1201 aatccagagt tacggtcgac aaaatatttc agcaactccg gacaaccgtt tcacacgtcg
     1261 gcgttgtttc aacggagcag gtaagttgat catcaagccc gccaaaaatg ttcttggctc
     1321 cattcgtctt ccgggagata aatcagtttc gcatcgttat gccatgctcg gcgccctggc
     1381 cgagggcaca acccacctca gcaatttctc caccggcgct gattgcgcca gcacgctctc
     1441 ctgcctgcgc cagctcggaa cccaggtgcg cgtgaacggt acgaaggtgg agattgacgg
     1501 ccgcgagcga ctccagcagc cgtcggcgag tctcgattgc ggcaattccg gttcgaccat
     1561 gcgcatgatg gccggtatcc ttgccgggca cgccttcact tgtgaaatgc acggagatga
     1621 gtcactctcg cggaggccca tgggccgtgt gatgaccccg ctgcggcaga tgggcgcgga
     1681 gattacgtct gccgccggag acaggcctcc gttaaagatc aaaggcggca atctgcacgg
     1741 gatggactac gtctcgcagg tggccagtgc gcaggtgaag tcagccgtgt tgttcgcagg
     1801 attgtttgcc tcaggtgaga ccagttatga agagccgtac cgcacccgcg accactccga
     1861 acaggcgctg cgcgcttttg gcgtggagct ttcgcgggca aaaaataagg ttcgcattgc
     1921 aggcgggcag aagttgaaag cgattgaggc cgcgattccc ggcgatatct cttccgcctc
     1981 gttttttatg tgcgcagccg cgctgtttcc cgagtcgaac ctggtgatcg acggtctgct
     2041 cctgaatcca acccgcgccg gactgcttga tgtactgaaa atcatgggcg caaagatcag
     2101 cgtgattaac cttgaggaac agaacggaga gctcgtggga acggtgaaga ttgaaaacgg
     2161 tgttctgaga ggcgctacta tctcaggcgg tcaatcggca gcattgattg acgaactgcc
     2221 tgtcctcgcg gccattggcc cttatacaca tgatggcatc gagattcgcg atgccaaaga
     2281 gctgcgggtg aaagagtccg accgcattgc gctggtggcg cgcaacctgc gcgccatggg
     2341 cgcggagtgt gaagagcgcg aagatgggct acgcgttccc ggaggacaga agctgcacgg
     2401 cgcaaccatt gatccggcgg gcgatcatcg gattgctatg gcattcgcag tagcggcgct
     2461 cagggcggag ggggaaacag aaatcaaggg cgatgatgca gcaaggatct cgttccccga
     2521 gttcttcacc atgctcaatg gcgtggtgga gcggtaatgg atgctcgtca ggtccaaaat
     2581 tccaacgagg aacaagcact gaaagacgca tagctgaaaa gcgtgaggct caaacaacga
     2641 tgaaggttgc cattcagggc gagcggggag cattcagcca tcaggctgcg ttgaagctga
     2701 tacaaggagc tgacgttgtt gcctgtggcc gctcaataga agtgtttgat catcttgatg
     2761 ccggacatgt tcgtgcggcg gtgatcccgg tcgagaacac tctcgccggc ccggtgggcg
     2821 agcatcttga tcttctgctg gagcgcgaca tctttgttca cagagaactg ctgcttcgca
     2881 ttgagcacaa cctgatcgcg gcgcccggaa caaagctgaa agatttgcgc caggttctgt
     2941 cgcatccggt ggcgctcgat caatgccgta aattctttcg cacgcataaa aaaatatctg
     3001 ccgtttcgtt ttacgacact gccggcagcg tgaagcatgt agtcgggaag aagctgcgcg
     3061 atgctgccgg gattgcgagc gcgcaggccg cgcgagagta tggcgggaaa attctgatct
     3121 ccaatctgga ggatgatcac cggaacgtca cccgattttt tctcatccaa aaaagcagga
     3181 aagttgattc acaagcggac aagacgtcac ttgtcttctc gctcaggaat gaagctggag
     3241 cactgttcaa ggcgctgagc gtgtttgctc tacgcgatct ggacttgagc aagattgagt
     3301 cgcggccggt acgcgggcga ccgtgggagt atcgcttctt cgtagatgtg ctgtgtggtg
     3361 acgaaccgcg gatgcggctt gcacttcgtc atctggagga gattgccggg atggtgaaag
     3421 tcctgggaat ctatcgcagg gccgaaccag cgaaattctg aggcgaatca ggtgtgaccg
     3481 atttcactga cacatcgaaa ctcccattcg acaatcggta gcggtcacgc tgctgccgga
     3541 gctgtggctg cactgggatt cggccactta atgggctggc tggtggtaat ttgcggacgc
     3601 tgtgacggct ggagtagaat ccgccgattg ctgtgggacg caccggcctc acacgttgca
     3661 tctttcccta ggcctcggtc atcaatatgt gagcgtatta ttatcaagga ttaattatgg
     3721 catctgaaac tcccaatact ctcaatcctt tacagggatc ttcggagttt gaacggcagc
     3781 tctttgaggg cgaaaagaag ggtgtgccga tccttccggt tcgggacact gtcttattcc
     3841 cgcatgcggt tctgccgctc acggtggggc gcgaaagctc catcaacctg atcaattctc
     3901 taggggacga gaagaccata ctggtggtgg cccagcgtga agcccgggtg gattcacccc
     3961 agcccaccga cctctacaac attggaacgc tggccacggt gcataaagta gtaaagatgc
     4021 cgaaccagag cctttttgtc tttacggaag gcctgcagcg cggcaagctg ggcgaattta
     4081 cccagctcac gcctttcatg cgcgccaatg tggaattttt gccggaggaa gaggaagcag
     4141 caggcgaagc ttctccggaa atcgaagccc tgcagcgcaa cgttctcacg ctgttccagc
     4201 agatagtggc cggttcgccc accctctctg acgaactgca gacggtggcg atcaatatcg
     4261 aggagccggg acgcctggtg gacttcgtgg cgtcttcact gccgttcctt tccaccaaag
     4321 acaagcagga gatactggaa acggctgatg tatatcgccg gttgaaggcg atcaaccagc
     4381 atctggcgaa ggagctggaa gtccagcagc tccgcaacaa gattcagacg gaagtccagg
     4441 accaggtgca gcagtcgcag cgcgagtact acctgcgcga gcagatgaag gcgatccaga
     4501 aagagctggg cgagcaggac gaagcccagc gcgatgtgga agacctgaag cagaaaatcg
     4561 aagcagccgg catgccggaa gaagtaaaga aggaagctct taaggagctc agccggctgg
     4621 gtcgcatgtc acccatggct gccgattact ccgtcactcg caattacatc gagtggctgg
     4681 cggtcttacc gtgggccaag tcgagtggcg ttgaagtgga catcaccaag gcgcacgaga
     4741 ttctggacgc cgaccactac gacttgaaaa aagtaaaaga tcgcatcctg gattacctgt
     4801 ctgtccggcg tttaaagccg aacatgaaag gaccgatcct ctgcttcgtt ggacctccgg
     4861 gcgtgggcaa aacctcactc gggcgttcga ttgcacgcgc tctggaacgc aagtttgtgc
     4921 gtctctcgct gggtggcgtg catgatgaag ctgagattcg cggccaccgc cgcacctaca
     4981 ttggcgcctt gccgggacag atcatccagg gaatccgccg cgcggagacg aatgatccgg
     5041 tcttcgtgct ggacgaagtg gataagctcg ggcgtgattt ccgcggcgac ccgtcatcgg
     5101 cgctgctgga gacgctggat cccgaacaga actccacgtt ccgcgataac tatctggacg
     5161 tccctttcga tctttcaaag gtgctgttca tctgcacggc caacatgctg gataccattc
     5221 cagagccgct gcgggaccgt atggagatca tcgaactcca gggctatacc gaagacgaca
     5281 agtatcacat cgcgcaacgt tacctcattc ccaagcagat tgaggagaac gggctgacag
     5341 ccgaacagat tgaaatctcg gaagactcag tccgatttgt catccggcat tacacgcgtg
     5401 aagccggtgt ccgcaatctg gaacgtaaca ttggaacgct ctgccgcaag caggcgcgcc
     5461 gcattgcgga aggcaagacg gacaagctgg tggtaacgcg tgagaccgtg caggagtttc
     5521 tgggcgggat caagattcgc atcgacaccg aaattgccga gcgcaccaag cgtcccggcg
     5581 tggcggtggg cctggcttgg acgccctccg gcggcgacat cctttttgtc gaagccaaca
     5641 agatgaaagg caagggcggc ttcaacatga ccggtcagtt gggcgaggtg atgcgtgagt
     5701 ccatgcaggc ggcgctcacc tgggttcgtt cgaacgcgga gaagcttggg atcagcgacg
     5761 agattttcaa agacagcgat attcacgttc acgttccggc aggcgccatc cccaaagacg
     5821 gcccttcggc gggtgtgacc atggtgactg cgctggtctc gttgctgtgt gaccgtccgg
     5881 tgcatccgct cactggcatg actggggaga ttacgttgag cggaaatgtt ctgcccatcg
     5941 gcggcgtgaa ggaaaaattt cttgcggcta agcgtgctgg tgtaaaggac atcatctttc
     6001 ccgcagataa ccgcatgaac gtggaagaag acctgactcc ggagcaggtg gaaggagtga
     6061 acgtgcactt cgtctccacc attgaagaag tgctggccat cgccctgccc agttcgaagc
     6121 aggaagagcg gcaggacgcg gaaacgcggg agaaagtcct gaccagcgtg taagtttaaa
     6181 acaggtgcaa ggtgttgggt gcgctgaagg gcgcacccat tcttttttga gcttcatacc
     6241 aaagagttaa ggcaaagctt tggccagcag cagctttcgt cggggcatcc aaccagatca
     6301 gcacaatctt tttcgtagtt ggggtgaaaa atgaaaggcc atggcgcgag taaattgcag
     6361 aagaaagtgt attgcctttt gagtgctctc gcgttcagct ttctcctttc gccgacagcc
     6421 gcccacgctc aggctaatgc ggttgaggct tatgccggcg ctatgaagca gccccgcatt
     6481 gccgagcaga tcgccggtct ggaacgctat ctgagcgtgg cgcaaaacag catacttcgc
     6541 caggacgcgc ttgaagtcct tatctgggat tacctgcgta tgggcagcgt tcgccatgta
     6601 caggagcgcg cgcaggatct gcttaaactc gatcccgcca accctgttgc ccaggcggca
     6661 ctggaagagc agggcgctgc gccgccgacc gtccaagcta agtcaaagaa caagagccac
     6721 cagagtcaga aggtgattgc agcgcaagcg gccttgatcg ctctggagca gttgcgaaag
     6781 ccagagggaa tggagccaca ggactttgcc gcgttgcggc gtcgagtgga gtcgcgactg
     6841 aacggcaccc ttggacttga ctacgtggaa gatgaagagt atcaactcgc gcgcacgcct
     6901 cttcagcagg cggtggcggt tgatcccggt aatccgcaat acgcttacgc gctgggtctg
     6961 gcgctactca acagcaaaga tcctgatcag caaagcgcat tcctgtacct ggcgcgagca
     7021 gtcaacctga cgcaaggcac tgctcaggga gcgcctattg ccgaatttgc acgcaagcaa
     7081 tatcagaagg ccggtggcaa cgatggcgac tggagcaggt atctcgcagc ggctgtggtg
     7141 ccctcgggaa cattgcagtc tgcttctacc gcggccgtcg cggcgaacgc gcccgcgtca
     7201 gtaactccgg ggaaagccac gcaagccatc atggcgagcg gcgccggctc gccaaatgct
     7261 cagcagaaca cttctgtagt ggcgaagaat actccgccgc cgaatcctgc aagtgggtca
     7321 gggaactcgg ggagcacgcg atcagatgct gtccctcgac gcactcctga gcctgtttat
     7381 cagcctcggc ttcagctttc cgcccctact gccccactct cgctgggaat tatgattcag
     7441 acctcgttgc tgaccaatca caatcggccg gcgatcattg ccaccctgaa agagatcgtc
     7501 agtcatctcc gtgctgacga cgaggctgcg attctggtct tcagcaacca gctcgatttt
     7561 gagcaggatc tcaccgccaa cgatgcgctt ctggagcagg ccatgagcac tctgcgtcct
     7621 cgtccgggca gggcattgct cgatgggatc gcctttgccg ccggccacct gaagcgcata
     7681 ggcaagaact caaaccgcgt tttgctggtg atctctgatg ggaacagttc gaacaataag
     7741 gaatcgctgc cggttacctc tgagatcagc ggagtgagaa ttgactgtgt gggtttgaat
     7801 gctgatggcg attcccagag acagcttctg tcgcggctag ctgcgtattc gggaggccag
     7861 gccagcttcg ccaacgatcc tcagcagttc cgggttgccg ccctgacaat gactcagcaa
     7921 ttgggactgc ccgtccgctg aaatcactga atttcccctc gtcaccggct tgaagatagg
     7981 ctgcaagtac cgccgaaacg gtgcgttctt tacataagct ttacattggg acaaaaaaat
     8041 ccggaacagt ctgcgttctg ttccggatga atcgtaaact gcgctcgcag cctgattgct
     8101 gcttacctga ttagacgttg atagaacgca gatggttcgc cagtttgcaa gaattgatac
     8161 gagctaacgt aaatcgtttc aaaacggcac aatcggcatg cgagccgtcc cgaacttggt
     8221 tatccttagt acaaaatgcg cattcatgtg ctgttgttcg gtcagctaaa agacatagtc
     8281 ggacgctcag aggattacct gactcttgag ccgggcgcgc ggctctcggc ggtgatcgcc
     8341 cattacggcg gccagttccc gaatcttctt ggactcgccg gatccattgc ctgctccgtg
     8401 aatcaggagt acgcggctgt ctcttcagaa ctccatgagg gtgatgaagt tggccttttg
     8461 ccgccggtca gcggaggtaa aggaatcgca aatccggtcc aggaattgcg ttctgcgcac
     8521 tgtgcaatcg tccgcgagcc tattgattac gccaaggtac gccagtctct ttcgcatcct
     8581 gaggatggat cggtgatcct tttcgatggt gtggtccgca acaacacccg cggacgcaag
     8641 actctgtatc tcgattacga gagctacgaa tccatggccc tgaacgaaat ggaaaagctg
     8701 gcgcacgcgg cgcttgagcg cttcaaggtg cgagatgtag cgctggtgca tcgcctggga
     8761 cgtctccaga tcggcgagac cagcgttctg atcggcgtgg catctgcgca ccgcgcagcc
     8821 gcttatgaag cttcgcgctg gctgatcgat actctcaaga aaaccgtgcc catctggaaa
     8881 aaggaatact ttgaggatgg tgctgtctgg gccgatggag agccttttcc tgaagaaatc
     8941 cggcggggca aataaccttt ctatgcagat tgcatctaag ctggtcagaa tacctgagcc
     9001 aaaactatga cgataacgcc agctgtgccc caacggttcg gtgttgcctg tctgctgatg
     9061 ctcgccctga gcgtgggcgc gcaggagccg caccgtgctg cggctgatca gcaaaaatcg
     9121 caggagccgg tttaccgcgt caatgtccga ttggtgaatg ttttcaccac ggttacggat
     9181 tcgcacggcg cgcccatcgc cgatctggca aaggacgatt tcaagatctt tgaagatgga
     9241 caggaacagg atatccgagt tttcgagcgc gaatccgaac tccccctgag catcgtattg
     9301 gccgtagata ccagccccag cacggagcgc gacttcaagc ttgaagtggt gtccgccaag
     9361 aagtttgccc gttccatcgt tcggccggtc gatcggttga gcgtgtttca ggtcaccgcg
     9421 aacattgacc aggtcacgcc ctttacgccc gacctgcgcc gcatcgaccg cggaattgac
     9481 gccctgcacg ttggccctgg aacttcactt tatgacgcga tctttctcag ttcagaggcg
     9541 ctgatggacc gcgagggccg caaagtcttg gtcctgatta ctgacggtgg cgacactacc
     9601 agcaaggccg attatcaggc ggcgttgaag cgagcccagc aggcggaagc cattgtttat
     9661 agcatcatcg tggtgccggt ggaagccgat gcgggccgca acctgggcgg cgaacacgcc
     9721 ctgatccaga tatccaaaga caccggcggc aaatactact acgcagagag cgtccgggag
     9781 ttggacgacg catttcagca ggtcagcaaa gagctgcgga cgcaatacct gatcgcctac
     9841 tatcccagcc gaaagctctc agactcgcct ttccggcgga tcaaagtgga agtggcgaaa
     9901 aaagatcccg atggcaagcc ctacctggta cgccatcgag cggggtactt taccgcgccc
     9961 gctaagtgat cttcgaaaac ctctggaacg cagaggaacg gacgacaagg agttgggaat
    10021 gggttttgtt gcaattttcg tttccgcggc ttgctcgctg ctcagcacct catctttctc
    10081 tcgggtttaa accatgatca gcatcgccat ggagtcccaa ccaagctata gcgggattga
    10141 aaagctccgc gatttcgtca tttctaaacc ctctgcttct ctgtgcctcg gcgtctcaaa
    10201 ggttttggga tttggttcgc ggggctaaag ctttggtcac agctaagctg aatctccggg
    10261 gtgccaaact gaacctttca cgctagaatg tttgccatgg ctttccgagc gagcgcccca
    10321 gcattttccg ggaaaaaacc ggccaagacc ccacctcctg atgaaaccgg catggagccg
    10381 gcttacctga agtctctggg tgagaagcag acgcctgtaa tggtgaaact gctctccgga
    10441 gagacctttc gcggctgggt ggaatattac gattccaaca tgatccgcct cacccgtgaa
    10501 ggcgtgccca atctgtttat cttcaagcac gagatcatgt acatcgctga agataacggg
    10561 cgccgtcccc gttaatgccg caacagcccc aggatttttt atctcctatg caggatctgg
    10621 cccgggaagc cggaggcctg ctcatgtcgt tcttcggcaa ggtcacaatc gagtacaagg
    10681 gcgaggctga cctcgtcacc aaagccgacc gcgcctcaga ggaatttttg gtctcccgca
    10741 tccgcaagct gtggccggac catgacctga tgggtgaaga aggcagccgg aatgataccg
    10801 gcagcgacta caagtggtac atcgatccgc tcgacggcac caccaatttt gctcacggct
    10861 accccgtgtt ttgcgtctct ctggggctgg attttaaggg tgagcgcatt gctggcgtaa
    10921 tttacgatcc cagccgccaa gagctgttcg ccgcggcaca gggaagcgga accacgctga
    10981 acggcaacga agttcgggta tccaggacgg cgcgaatggt tgaaagcctt atggctaccg
    11041 gatttcccag ccacaagcgc cataagaatc cgaatatcca cttttatcac cagcttacgc
    11101 tgcggtcaca tggcatccgg cgagccggtt ccgccgcgct cgatctctgt tacgtggctt
    11161 gcggacgtta tgatgctttc tgggaattca acctcaaccc ctgggatacc gcggccggag
    11221 tactgatcgt gcagcaagcc ggtggcaccg tgaccaactt cagcggcggc ccgttctcta
    11281 ttgatagccg tcaggtgctg gcctcaaaca gccttctgca caaagaactt ttggcggagt
    11341 tcaaggccat atttgagggt cgtgtggaag gcctgccgcc ggtagccgag tatttggctg
    11401 aaagatgagc ggcaagccgg atttgagtaa ctgacctcgg caattggggt tattatctat
    11461 ccgcttcagc cgcaaatgta cgtttgagga gccggggaca catgatcgtc gatcgctgga
    11521 caaccgcgtt ttggggcctg atttacatct tcatcggttg catgtggttc tatcggttct
    11581 atcggggaac taaactcgaa cagcaccttt tcacgctcag ctcacccgag cctcgcagaa
    11641 tggtccgcaa ggataagatc tgggcaattt ccatgggctg catcagcgtg gcgatgggac
    11701 ttatgtgact ggttcgcgta tcccggtagc gagcgttcgt ctatttctgg gcaggctggt
    11761 cttcttccag ttcgctcagg gctgccttgg cgtctcgtga gttcgggttt gccttcaaag
    11821 cgtcctgaaa agcggcgatg gctttgtccc gctggtgtgt ttcttcataa agcgccccca
    11881 ggtaaatcag cgccttgtca tcatctctac gtgttctggt gtaccgctca aggtaattga
    11941 tggctttggg gaagtcgtcc tgctgcacag ccatttgcgc gcggaacagg agcgcatcat
    12001 cgccgtgggt cttcaccagt tcattcagcc cgagcgccag caccaatgac gtaatcagca
    12061 cagtcgccca ttgataaagc ttgtggtgcg cggcgaaggc tcccagcggc aggccaatca
    12121 gcagcccggt aacaaagccg ccaaggtggc acatgttatc cacgcggccg cccatgaatg
    12181 cccctccaat acctgcaccg agcgcaaagt tcacgcccac aaaaaagatc atgctgctgg
    12241 taatcgcgcg cttttctccg gccgaaatgg aaagattgcc gaacttcact ccggccaata
    12301 atgctccagc aatgccgaat atcgcgccag acgctcccac ctcagatcca cctggatgag
    12361 ctgccgtgct gagaagcgct cctcccacac cggtgaccat gtagatggca aacgtttgcc
    12421 atttgccaaa cagcttctct gatagttcac ccaggctcca aagacaccac atgttgaagc
    12481 caatatggag taaccctgca tgcaaaaagc cggcggtaac cagcctccag taatcgccgc
    12541 ccagggtcaa aggcccaaaa ttggcgcccc atttgagcaa cgccgatcca ttcatgtccc
    12601 aaaagcctgc gcccgtgaac accatggcgg tgaagaccgc caggttaatg gcgagcagca
    12661 ccgtcgtcgc cggccgatct cgcatcgtcc cggttttcag acccacgcgc gcgcgccgcg
    12721 tggcgcgtcc ggcgcagttg tcacacagca cgggcgccat tccttcttcg ttcactggca
    12781 gctcagcgcc gcacctgagg catttgggca tggagacagc ataacaagtc cgaattgttt
    12841 tctgtacttt gctcagtggc gcagcaggaa gagacttcgg catgtcggga attcgaatcc
    12901 tacaagctca ggtagccgac actttgattt tgggcagctg ggggtagccc ttctcgtgag
    12961 agcggttctg gtttggcagg gttggtcgcg caggattggt cgcgccgaag gaacccgcag
    13021 gttctccgct cccgccttcg caacggctac tctggcctgc catgcaaagc ccagcaggac
    13081 ttgttagaat ttttgtgtgg aaccgtcatt gttgaaccgc ccaatcgcca agcggccgga
    13141 caagtgttcg ttcaaaggcc gcattctgtt tcttaccgaa gatcctgaat tgatccggcg
    13201 gcaattagcc ggggaagacc tcccctggga catgaggaac ccggagaaca atcccaagct
    13261 gcgcgacgat atttccacag acgagattac cccggcgcac atctgcttct tcttcgacga
    13321 gaccctgggc gagtttcctt atacaggctt gaagtgtggc aatgaagttc ccatcaaccg
    13381 cggcgacgtg aaaaaaggcg gctttgtggc tgccgtgagc ggcaaacggc gcggcaaggg
    13441 ttctagccgc gaacagtcgc cttacgccga gctttgcgcc ggcatcaagg tggtgatcgc
    13501 cgaaaacatc gaacgcattt acaagcagaa ctgccagaat ctcggcgttc ttactaccac
    13561 cgatttcagc gtgatcgaca aggtccgcaa cggggaagaa attccgctca gcaagttcac
    13621 tgaaggcgaa gatgagatca cgcggcaggt gatcgagtac ggcgggctgt tcccattcaa
    13681 cgtggcgcgc atgcagaaga agaccttctt gccgccgatt cagaccggca aacggggcat
    13741 gaccatcgcc g
//
LOCUS       DASQYP010000301         8535 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_231937, whole genome shotgun sequence.
ACCESSION   DASQYP010000301 DASQYP010000000
VERSION     DASQYP010000301.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 8535)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8535)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8535
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_231937"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..431)
                     /locus_tag="VE783_09720"
     CDS             complement(<1..431)
                     /locus_tag="VE783_09720"
                     /inference="COORDINATES: protein motif:HMM:NF013088.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HYX53718.1"
                     /translation="MVSGGTLSRSHLLGYVALCGIWGSTWLAIKIVVQYIPPLEAAAI
                     RFLAAALLLLGMAAAQRRRWPHGERQWNALFVLSLTFLAIPYGLVFWAEQYVSSGMTA
                     VLFSAFPLVVALLTPLMTGKKVPRRAVFAMLVACGGLAYLF"
     gene            complement(521..1354)
                     /locus_tag="VE783_09725"
     CDS             complement(521..1354)
                     /locus_tag="VE783_09725"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53719.1"
                     /translation="MSEVPHDDGANPVVRTILIVVAVIYLIGSAIFMVQAYNRMNDLE
                     QHQAVLQKELLKKVDDANARTRASVDVLADKVGMTHKELSKKASDIQAAEKATESRLK
                     ADEESTEKELGDVKGEVNGVKGDVVKVSADVTDTRNDLSATKTKLEHAIGDINKHSEL
                     IATTKDELEFLKHRGDRDYFEFTLNKGKDPSRVSIVSLQLKKTDPKKNKFSLTVIAED
                     KKIEKKDRNINEPLQFYTGRDRALFEVVVNSVSKDAVTGYLSTPKNATTAQLPSHGTQ
                     Q"
     gene            1642..2301
                     /locus_tag="VE783_09730"
     CDS             1642..2301
                     /locus_tag="VE783_09730"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53720.1"
                     /translation="MMKIFYKASSRIRAFGTIVTLLVLAGLGLLAQVTSNAANGGNAA
                     PPSVVRIVSPQQGQKLQQNAISVQYTFQPRQNAINPPRQIFQVQLDNRDPVQTEQAET
                     TFTGLTPGSHTLAVQLVDANGVAVEGSRSQVQFTVMQQVTPPSNGNTPQPSRSGAPPQ
                     ARLSSSGQAALAGLFNADQLGSQRSAAPAYAGAVPLVPILAIGALIGGLISARWTNSS
                     R"
     gene            2334..3029
                     /locus_tag="VE783_09735"
     CDS             2334..3029
                     /locus_tag="VE783_09735"
                     /inference="COORDINATES: protein motif:HMM:TIGR01076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class D sortase"
                     /protein_id="HYX53721.1"
                     /translation="MDAHNTKLRWHRHLDRLSRNTANAVRGLAASPRSAIALALILVG
                     LVLLGYVSSEYWGMFHRQKQLAQQWEQQAAQANVPRHAQLSPEDMLTRVIIPKIHLDA
                     IVVEGASRKDLSEGPGHMRETAMPGQPGNAVITGHRDTFFRHIYELNRGDEITVRRAG
                     QTYKYEVTSKKIVMPDDLSVIRQTNDPQLTLITCYPTYYIGPAPKRLVVFSRLVESSE
                     PAVSQTAARGNGE"
     gene            3073..4128
                     /gene="thiO"
                     /locus_tag="VE783_09740"
     CDS             3073..4128
                     /gene="thiO"
                     /locus_tag="VE783_09740"
                     /EC_number="1.4.3.19"
                     /inference="COORDINATES: protein motif:HMM:TIGR02352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016647 - oxidoreductase activity, acting
                     on the CH-NH group of donors, oxygen as acceptor [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycine oxidase ThiO"
                     /protein_id="HYX53722.1"
                     /translation="MSSPDVVVVGAGIIGVSLALELRARGASVTILERGAPGQEASSA
                     AAGMLAATDPETPSALQPIASESARLYPDFVEMIERSSGMNVDFRSHGTMAIGELDTA
                     PPEYVALTEKEISLLEPAILSNTLPVYLVAEASVDPVLLIRAALKSAGLAGVEIQTAT
                     EFREAHSSLSGVEVVTSTGTISCQAVVNCCGAWSGAPVRPRKGQMLYVRPENTMLIQH
                     VVRAADAYIVPRSSGKILIGATVEDVGFDKRVDPATIQQLHQAASRYLPQVAKAEIIS
                     SWAGLRPGTPDDLPIMGQIEPGMFVASGHFRNGILLAPITAKLMADLISGLQPAMDLS
                     PFSASRFAPSEISSTRG"
     gene            4168..5526
                     /locus_tag="VE783_09745"
     CDS             4168..5526
                     /locus_tag="VE783_09745"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidine kinase"
                     /protein_id="HYX53723.1"
                     /translation="MDLQFLLIQLLIKLGVATAVSSALGRSREFKKLLFSSRRTVQQN
                     LGFILFTCFPFALGVYIRFTVKNFLAADMGFEASVLLGVIGGRIAGTLGGAFMALPAM
                     FFGEYLTLPVNMVAGLLAGSLRHFCRNEEEIWTFSPFIDLSVWRWIRRNLRHPRIDWQ
                     TAFFLIIIALQAARFEIHYAAPKLLWALYLPSPVAMITSFAAVVATIAIPIKIWNNAR
                     IEMKLEEQERLLLEARLDALQSQINPHFLFNTLNSISSLVRFDPDGARELILKLSKIL
                     RRLLGKHDEFVQLREEIEFVDDYLDIEVVRFGRDKLRVYKHLNPDTLDIVVPSILLQP
                     LVENSIKHGLAPKVDGGSITIRSRLQEGKLIIQVEDDGVGMSAPPAVAAQTMGSGRGI
                     GMVNVAERLHVLFGDEGKMIVQSRDGQGTLVMLELPVLQTDELGENPLSPLYAARSIT
                     RL"
     gene            complement(5496..6638)
                     /gene="bshA"
                     /locus_tag="VE783_09750"
     CDS             complement(5496..6638)
                     /gene="bshA"
                     /locus_tag="VE783_09750"
                     /inference="COORDINATES: protein motif:HMM:TIGR03999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0071793 - bacillithiol biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyl-alpha-D-glucosaminyl L-malate synthase
                     BshA"
                     /protein_id="HYX53724.1"
                     /translation="MKIGITCYPTYGGSGVVGTELGIELAARGHEVHFIAYQQPIRLN
                     NQHPQIFFHEVTVSQYPLFEYPPYDLALATRMAEVAEIYDLDILHVHYAIPHSVSALL
                     ARQMLAAMDKPRKLPFVTTLHGTDITIVGADRSYLPVTRYSIEQSDGVTAISYWLKQR
                     TLQEFEIRNPIEVIQNFVNCDVYRRDPRAAEHRGEFADPEERIVVHVSNFRPVKRIGD
                     VIEVFDRIQKAVPARLLLMGDGPERSRAEWLVSQKGLRKKVEFMGKVDHVNEKLSVAD
                     LMLMPSELESFGLAALEAMACEVPAVATAVGGVPEVVDHGRTGYLAPVGDVETMARCA
                     IEILSDEKRLREMGMLARWEAQARYCSTKIIPEYEAFYKRVIERAA"
     gene            complement(6853..7719)
                     /locus_tag="VE783_09755"
     CDS             complement(6853..7719)
                     /locus_tag="VE783_09755"
                     /inference="COORDINATES: protein motif:HMM:NF016668.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ChbG/HpnK family deacetylase"
                     /protein_id="HYX53725.1"
                     /translation="MRRLIVNADDFGLTSGVNDAISHANQQGVVTSATIMANSRAFTE
                     AVMIAGNQAALHTGCHVVLIDGIPIVSSHKSVVAQGGAFRSSLREFAAAAVRQRIDPA
                     EIEREAEAQIAKIQSSGLTVTHVDSHKHTHMFPHVLRPVLRAARTRGVRAVRNPFEPR
                     RAWTGRIIMAAPGLWLRSCAVMVFNMFAAEFYRAVKAVGMVTTDGTVGIAVTGRLDQR
                     ILLAILRALPEGTWELVCHPGYSDADLQAAGTRLLKSREIELSALTSEETKHELERQK
                     IELISYADLLDL"
     gene            complement(7767..8138)
                     /locus_tag="VE783_09760"
     CDS             complement(7767..8138)
                     /locus_tag="VE783_09760"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HYX53726.1"
                     /translation="MKAILFVDDHEVLARLSCEILEMQGYRAVSAYNGEEALQKFENE
                     DFDILVTDYRMDGMNGVELARKIHETRPDVPVIIVTGYGPVDGGKDVVACLQKEELFP
                     SLLEKIKTFLEEEPQPAAKTA"
BASE COUNT         1743 a         2575 c         2329 g         1888 t
ORIGIN      
        1 tagaacaggt acgccagccc gccgcacgcc accagcatgg cgaacactgc gcgtcgcgga
       61 acttttttgc ccgtcatcaa cggtgtaagc agggcgacga ctaggggaaa tgcagagaac
      121 aagacggcgg tcattcccga actgacgtat tgctccgccc agaagaccag cccgtacggg
      181 atagccagaa atgtcagcga gagaacgaac agtgcattcc actgccgctc accgtgaggc
      241 catctccgcc gctgcgctgc agccattcca agaagaagta aagcggctgc cagaaagcgg
      301 atagccgccg cctcgagcgg cggaatatat tgaaccacta ttttgatggc aagccatgtg
      361 ctaccccaga tgccgcaaag cgcaacatac ccgagcaggt gcgagcgtga aagcgtgcct
      421 ccggagacca ccaaaccagt gtaatggagc ggctgaaaac ctacgagttt ggaggcttac
      481 ggagtcgcgt ggcgctcggc gagcgccacg cgcaagagag ttactgctgc gtcccgtggc
      541 tgggaagctg tgccgtcgtg gcattcttcg gcgtggagag atatccggtc accgcatctt
      601 ttgataccga attcaccacc acttcaaaca gcgcacggtc acgcccggtg tagaactgca
      661 ggggctcatt gatgttgcgg tctttctttt caatcttctt gtcttccgcg atcacagtga
      721 ggctgaactt gttctttttg ggatcagttt tcttcagctg caggctgacg atggacacgc
      781 gactcggatc tttgcccttg ttcagcgtaa attcgaagta atcccggtca ccgcgatgct
      841 tcaggaactc gagttcatct ttcgtggttg cgatcagctc gctgtgctta ttgatgtcac
      901 caatcgcgtg ctccagcttg gttttggtcg cgctgagatc gtttcgggta tcggtcacgt
      961 cagcgctcac cttcaccacg tcacccttca cgccgttcac ctcacccttg acgtcgccca
     1021 gttccttctc cgttgactct tcgtcagctt tcaggcgcga ctcggtagcc ttttccgccg
     1081 cctgaatgtc gctggctttc ttgctgagtt ccttatgggt catgccgacc ttgtccgcca
     1141 gcacgtccac cgaggcgcgc gttctggcgt tagcgtcatc aaccttcttc aggagctctt
     1201 tctgcagcac cgcctgatgc tgctccagat cgttcatgcg gttgtaggcc tggaccatga
     1261 aaatagccga gccgatcagg taaatcaccg ctaccacaat caggatggtg cgcactacgg
     1321 gattggcgcc gtcgtcatgc ggcacttcag acataaaact actccattca gctttggatt
     1381 gatgagcaga gacattgttg agcagaactg ctgccctgtc aatcaaagct tcttctttgg
     1441 ccggagttac aggagttcgc ggtgcattct ggcccagaga ttgcttacat actgtactaa
     1501 gcagacccgc agtaacccct gttcccatca ggttcgcgaa acattttcaa gaggttaggc
     1561 cgttgcagca ggaagcggcg cgagtactcg caatccgcac tggcggtcaa cctgtggcat
     1621 acaaattctc attgtgggca gatgatgaaa atcttctaca aggcgtcctc aagaatccgc
     1681 gcatttggaa ccattgtcac gctgcttgtg cttgcaggtt tgggtttgct cgctcaggtc
     1741 acttcaaacg ccgctaacgg cggtaatgct gcgccccctt cggtggtgcg cattgtctct
     1801 ccgcagcagg gacagaaatt acagcagaac gccatctccg ttcagtacac cttccagccg
     1861 agacagaacg ccatcaatcc gccgcgccag atctttcagg tgcagctcga taaccgcgat
     1921 cccgtgcaga cggagcaggc tgaaaccacc tttaccggct tgacgcccgg cagccacact
     1981 ttggccgtgc aactggtgga cgcaaacgga gtagcggttg agggtagccg cagtcaggtg
     2041 cagttcacag tcatgcagca ggtcacgcct ccctcaaatg gcaacacccc ccagcccagc
     2101 aggtctggcg cgcctccgca ggcccgtttg agcagttcag gtcaagctgc cctggcagga
     2161 ctgttcaacg cagatcaact gggttcccaa aggtcagcag caccggccta tgcgggcgcg
     2221 gtcccgttgg tgcctatttt ggccattggc gcgctcatcg gcggcctcat ctctgcccga
     2281 tggacgaact catcccgctg aacggctctc catctgcatc taactgaaac gggatggacg
     2341 ctcacaacac caaactgcgc tggcatcgtc atttagaccg gctaagccgt aataccgcca
     2401 atgccgtgcg cggactggcg gcttctccgc gaagcgcgat tgcacttgcc ctcatcctgg
     2461 ttgggctggt tctgctgggt tatgtcagca gcgagtactg gggcatgttc caccgccaaa
     2521 agcaactggc gcaacaatgg gagcagcagg ccgctcaggc aaatgtgcca cggcacgcgc
     2581 agctctcccc ggaagacatg ctcacccgcg tgattatccc caagattcac cttgacgcaa
     2641 tcgtggttga aggagcttcc cgcaaggacc tctcggaagg gcccggccac atgcgcgaga
     2701 cggcaatgcc cggccagccc ggaaacgctg tgattaccgg ccatcgcgac acatttttcc
     2761 ggcacatcta cgaactgaac cgcggtgatg aaatcacggt ccgccgcgcc ggacagacct
     2821 ataaatacga agtcaccagt aagaagatcg tcatgccgga cgatctgagt gtcatccgcc
     2881 agacaaacga tccgcagctt accctgatca cctgttatcc cacttactac atcggcccgg
     2941 caccaaagcg tctggtcgtc ttttccaggc tggtcgaaag cagtgaaccc gccgtttccc
     3001 agacggcagc tcgcggcaac ggcgagtaaa cgcgcggttc gctcgcgaaa atttccgtct
     3061 taaaatagac ctatgagctc accggatgtg gtggtcgtgg gcgccggcat catcggcgtg
     3121 tctctggcgc tggaattgcg agctcgcggt gcttccgtga ccattctgga acgtggcgca
     3181 cctggtcagg aggcctcctc ggcggccgcg gggatgcttg cagccacgga tcccgaaacc
     3241 ccgtcagctc tgcaacctat agcgagcgaa agcgcacgcc tttatccaga tttcgtggag
     3301 atgatcgaac gttcttccgg tatgaacgtc gatttccgca gccatggaac catggctatc
     3361 ggcgaactgg acaccgcccc gccagagtat gttgcgctca ccgagaaaga gatctcactg
     3421 ctggaacctg cgatcctaag taacactctt ccggtctatc tcgtggcgga agccagtgtg
     3481 gatcccgtgc tgctcattcg cgcggcgttg aagagcgccg ggctcgccgg ggtcgaaatc
     3541 caaaccgcta ccgaatttcg cgaagcccat tcctcattat caggggtgga ggttgtcact
     3601 tccacaggca caatcagctg ccaggctgtg gtgaactgct gcggggcctg gtcgggagcg
     3661 ccggttcgac cgcgcaaggg acagatgctt tacgttcgtc ctgaaaatac gatgctcatc
     3721 cagcatgtgg tccgcgcagc agacgcttac atcgttccgc gcagctccgg caaaatcctc
     3781 atcggtgcta ctgtcgagga tgtcggcttt gacaagcggg tggatcctgc aaccatccag
     3841 cagctgcatc aggcggcgtc caggtacctg ccccaagtcg cgaaggccga aatcatatca
     3901 tcctgggccg gcctgcgtcc cggcacgcct gacgacctcc ccatcatggg ccagatcgag
     3961 cccggcatgt tcgtcgccag cggtcatttc cgcaatggaa ttctgctggc gccgatcacg
     4021 gccaagctca tggcagacct tatctctggc ctgcagcctg ccatggatct aagtccattt
     4081 tcggcatccc gcttcgcccc tagcgagatc agctccacgc gtggctaaaa atgtgggatt
     4141 tctctggttt catgaaaaaa tagcaacgtg gaccttcagt ttctgctgat acagctcctg
     4201 atcaagctgg gcgtggcgac cgccgtctcc agcgcgctgg gccgctcccg cgagttcaag
     4261 aagctgcttt tctccagccg ccgcaccgtt cagcagaacc ttggattcat cctgtttacc
     4321 tgttttccgt tcgctctggg cgtctatatc cgattcaccg tcaagaactt ccttgccgct
     4381 gacatgggct ttgaagcctc ggtcctgctg ggggtaatcg gcggccggat tgctggaact
     4441 ttgggcggcg cgttcatggc cctgcccgcc atgttctttg gtgaatatct gactctgccg
     4501 gtgaacatgg tcgccggtct tcttgcgggc tcgttgcggc acttctgccg caatgaagaa
     4561 gaaatctgga ccttttcgcc atttatcgac ctcagtgtgt ggcgctggat caggagaaac
     4621 cttcgtcacc cgcgcatcga ctggcagaca gcattctttc tcatcatcat cgcgcttcag
     4681 gcggcccgct ttgaaattca ctacgccgca cccaagcttc tgtgggcgct ttatcttccc
     4741 tcacctgtcg caatgatcac gagcttcgcg gcggtagtgg cgacgatcgc cattcctatc
     4801 aaaatctgga acaacgcgcg cattgagatg aagctggaag agcaggagcg gctcctgctg
     4861 gaggcccggc tcgacgcgct gcaaagtcag atcaatcccc actttctgtt caataccctg
     4921 aactcgattt cgtcgctggt ccggttcgat cccgacggag cacgcgaatt gatccttaaa
     4981 ctttccaaga tcctgcgccg cctgctcggg aaacatgacg agttcgtgca gcttcgtgaa
     5041 gagatcgaat tcgtggatga ttatctggac atcgaagtcg tccgcttcgg ccgcgacaag
     5101 ctgcgggtct acaagcatct gaatcccgat acgctcgaca tcgtggttcc ctccatcctg
     5161 cttcagccgc ttgtagaaaa cagcatcaag cacggactcg cgccaaaagt tgacggcggc
     5221 agcatcacta ttcgaagccg cttacaggaa ggcaagctga tcatccaggt ggaagatgat
     5281 ggagtgggca tgagcgcacc gccggcggtg gcggcgcaga ccatgggatc gggccggggc
     5341 attggaatgg tgaacgtcgc cgagcgcctg cacgtcttgt ttggtgatga aggaaagatg
     5401 atcgtgcaga gccgtgacgg ccagggcacg ctggtgatgc tggaacttcc cgtgcttcag
     5461 acggacgaac tcggcgaaaa cccgctttca ccgctttacg cagcgcgctc gatcacacgt
     5521 ttatagaagg cttcgtattc aggaatgatc ttggtggagc agtagcgggc ctgcgcttcc
     5581 catcgcgcca gcatgcccat ctcgcgcagc cgcttttcat cggaaagaat ctcaattgcg
     5641 caccgcgcca tggtctcaac atctcccacc ggcgcaagat agcccgtgcg tccatggtca
     5701 accacctccg gcacgccgcc caccgccgtg gccacggcgg gcacctcgca ggccatagct
     5761 tccagcgccg cgagtccaaa ggactcaagt tcgcttggca tcagcatgag atcagccaca
     5821 gaaagctttt cattcacgtg gtccactttt cccatgaact ccactttctt gcgcagcccc
     5881 ttctggctca ccagccactc agcgcgcgac cgctccggac catcgcccat cagcaagagt
     5941 cgggcaggca cggccttctg aatgcggtcg aagacctcga ttacatcgcc tatgcgtttt
     6001 accggtcgga agttggaaac gtgtacgaca atccgctctt ccggatcggc gaattcccca
     6061 cgatgttcag ccgcccgtgg atcgcgacga tagacatcgc agttgacgaa gttctgtatg
     6121 acttcgatcg ggttcctgat ttcaaattcc tgtagcgtgc gctgtttgag ccaataggaa
     6181 atcgctgtca cgccatcgct ctgctcaatg gagtaacgtg taacgggcag atacgagcgg
     6241 tcggcgccga caattgtgat atccgttccg tgcagcgtgg tcacgaatgg cagcttgcgc
     6301 ggcttgtcca tggcggcgag catctgccgc gccagcaacg cgctcaccga gtgcggaatg
     6361 gcgtaatgca cgtgcaggat gtcgagatcg tagatctccg ctacctctgc catgcgagtg
     6421 gccagcgcca gatcgtacgg cggatactca aacaggggat actgcgagac cgtgacttcg
     6481 tgaaagaaaa tctgcgggtg ctggttgttc aatcggatgg gctgctggta ggcgatgaaa
     6541 tgcacttcat ggccgcgcgc agccaattca atcccaagtt ccgtacccac tacgccgctg
     6601 ccgccgtatg tggggtagca ggtgattcct attttcatta gattatgtcg ctgcgcttca
     6661 aaaccgcgcg cgagcttcct ccgcttccga tcgatgcggc tcgtttgcaa acctgctcga
     6721 cgcgtgcccg gcctcgcatg tttttctgtc gcatcagctc attgccgctg cgctccaaaa
     6781 ccgctcgcga gctttctccg cctcactaac agcctgaaat ttgattcaga atcgcgctgc
     6841 cagattcatt tgttataggt ctaatagatc agcataagaa atcagctcta tcttttgacg
     6901 ctccagttcg tgctttgttt cttctgaagt aagcgccgag agctcgattt cgcgcgattt
     6961 gagtagccgg gttcccgccg cctgcagatc agcgtcagag tatcccgggt ggcaaaccag
     7021 ctcccacgtt ccctccggca aggctcgcag aatagcgagc agtatccttt gatcgagcct
     7081 cccggtcacg gcgattccta cggtgccgtc ggtggtcacc attcccacgg ctttcaccgc
     7141 tcggtagaac tctgcagcga acatgttgaa aaccatcacc gcgcaggagc gcagccatag
     7201 gccgggtgcg gccatgatga tgcgacccgt ccaggcgcgt cgcggttcaa aaggattgcg
     7261 caccgcgcgc acacctcgcg ttctcgccgc ccgcagcacc gggcgcagca cgtgagggaa
     7321 catgtgcgtg tgcttgtggc tgtctacatg cgtcacagtc aagccgctgg attgaatttt
     7381 tgcgatctgc gcttctgctt cgcgctcgat ttccgcggga tcaatcctct ggcgaactgc
     7441 agccgcagcg aactctctta ggctgcttcg aaaagcacca ccttgtgcga caactgactt
     7501 gtggctggaa acaatcggaa tcccatcgat gagcacaacg tggcagccgg tgtgcagcgc
     7561 agcctggttt ccagcaatca tgactgcttc agtgaatgca cgcgaattcg ccatgatggt
     7621 ggcggaggtg actacgccct gctggttcgc gtgagaaatt gcgtcattga cgccgctggt
     7681 aagcccaaaa tcgtctgcat tcactatgag gcggcgcacc gcctcatact aacagaacgg
     7741 tttttcagct ctggcgggac ttgcagctag gctgttttcg cggctggttg gggctcttcc
     7801 tcgagaaacg ttttgatctt ctccagcagc gaagggaaga gctcttcttt ttgcaggcag
     7861 gccaccacgt ccttgccgcc gtccaccggc ccataaccgg taacgataat caccggaaca
     7921 tccgggcgag tctcgtgaat tttgcgcgcc agttccacgc cgttcatgcc atccatgcga
     7981 tagtcggtaa ccaggatgtc gaaatcctca ttctcgaact tctgcagcgc ttcttcgccg
     8041 ttgtaggcgc tcactgcccg gtagccctgc atttccagga tttcgcagct taaccgcgcc
     8101 aacacttcgt ggtcatcgac gaacaggata gccttcatga aacttcctcc gggtaatgct
     8161 tggggtcaaa acttggaagg ccgggggaga gacgaagtcg gcctccagta ttttgtatcc
     8221 aaagcggcag gaaaagatgc ctctctggaa ggtaaattcc tcgtgcaacc cattagatac
     8281 cgggcaaacc ggggtcgcaa cgcgttaatc tgtgccactg ctggatttct gtagattgga
     8341 gcgttcgccg tcgctggttc tcttccgatc acaaggggag ccccaaatgg cccccgtttc
     8401 gcaccatttt tcctattcgc cagctggcgg aaggtacagc accgggatgt tgctgttgcg
     8461 caccagctca ttgaacgccg gtacatcact ggtcatgatc tgtttccacg ccgccagctg
     8521 ctgatcaatc tgccc
//
LOCUS       DASQYP010000302         6457 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_121015, whole genome shotgun sequence.
ACCESSION   DASQYP010000302 DASQYP010000000
VERSION     DASQYP010000302.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 6457)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6457)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6457
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_121015"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            1..163
                     /locus_tag="VE783_09765"
                     /pseudo
     CDS             1..163
                     /locus_tag="VE783_09765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015742582.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA]"
                     /pseudo
                     /codon_start=2
                     /transl_table=11
                     /product="FKBP-type peptidyl-prolyl cis-trans isomerase"
     gene            complement(268..846)
                     /locus_tag="VE783_09770"
     CDS             complement(268..846)
                     /locus_tag="VE783_09770"
                     /inference="COORDINATES: protein motif:HMM:NF024273.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DinB family protein"
                     /protein_id="HYX53727.1"
                     /translation="MQETAEQYIERLISYTGNKDPLRLQRESLTRLAALLRGKSKQQL
                     SRRPAPGKWSAGEIYAHLSDTETVVAWRLRQILASNGVAIQAYDQDLWAEKFRYSKRD
                     AKQSFGTFRGAREGNLVLLKAVSRELWNNYGMHAERGEESITRLIKLTAGHDINHIRQ
                     IEACFKAQTKTRAAKRAGKTKRRSAKTKAASV"
     gene            971..1234
                     /locus_tag="VE783_09775"
     CDS             971..1234
                     /locus_tag="VE783_09775"
                     /inference="COORDINATES: protein motif:HMM:NF012675.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015036 - disulfide oxidoreductase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutaredoxin family protein"
                     /protein_id="HYX53728.1"
                     /translation="MELTVYSAPWCRDCHIAKRWLLQHRIMFKEVNIEEVPGAAEEVI
                     RNTGKRAIPQFVVNGRWIQPYTPGQGFKFVEMAELFGVTGGAQ"
     gene            complement(1309..3231)
                     /locus_tag="VE783_09780"
     CDS             complement(1309..3231)
                     /locus_tag="VE783_09780"
                     /inference="COORDINATES: protein motif:HMM:NF012861.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chloride channel protein"
                     /protein_id="HYX53729.1"
                     /translation="MKDRSPIVRSSAVNQASYPGVRLRDFSTTWRVLPISGLAVVIGV
                     VAAYVAVALLKLIGFFTNLFFYQTLSTDFRSPADAVWPLRQVSLALHHPGWLAFFVPI
                     IGGVIVGLMARWGSDKIRGHGIPEAIEAILLRGAKVEPRVAVLKPVSAAIAIGSGGPF
                     GAEGPIIMTGGACGSLIAQFFHLTSAERKTLLVAGAAAGMSATFAAPFAAVLLAVELL
                     LFEWKPRSFIPVVLASVAAEAARIQLLGPGPIFQVPPHEVTFSPAVMFGCLLSGLLAG
                     ALAGLLSNFVYGVEDGFAHLKKIHWMWWPAIGGAVVGVGGLIYPRALGVGYDVIGDLL
                     KGNFTLKLIMGVLLVRSVIWAVSLGSGTSGGVLAPLLMMGGSLGALEALFLPNQGLGF
                     WPLISMGAILSGALGAPLTGVMFAFELTSDYHSIFPLLLACMTAHAFTALTLPRSILT
                     EKLSRRGHHLTREYVVDPMEVLAVEDVMRTSISALPAESTLAEVRQAVDHSENGRGQR
                     VYPVIDQDRNLVGVITRGDLTKIVASVDASEVAHLRLADLVAKEPVVAYPEEPLRVVV
                     NRMATTQLTRFPVVRQGAEAELLGMVAIEDLLRARELSLEEEHHRERVLRLRMPASLR
                     WRGPTDKKDEPAEKVS"
     gene            complement(3228..3722)
                     /locus_tag="VE783_09785"
     CDS             complement(3228..3722)
                     /locus_tag="VE783_09785"
                     /inference="COORDINATES: protein motif:HMM:NF024212.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family winged helix-turn-helix
                     transcriptional regulator"
                     /protein_id="HYX53730.1"
                     /translation="MIKEKKSRPLLETEYMALAEFRYQLRRFLRHMEDEVRELGVNPQ
                     QYQVILAIKGLPSDQVPTISRIAERMQLNHNSTVELVDRCEERGLLKRARSGSDRRQV
                     TLMITSDGDAMLRRLGSAARQELRSIGPMLVDSVIRLTNENTGKHAARAGTKRLAASK
                     KAGT"
     gene            4017..5312
                     /gene="purB"
                     /locus_tag="VE783_09790"
     CDS             4017..5312
                     /gene="purB"
                     /locus_tag="VE783_09790"
                     /EC_number="4.3.2.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR00928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004018 - N6-(1,2-dicarboxyethyl)AMP
                     AMP-lyase (fumarate-forming) activity [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate lyase"
                     /protein_id="HYX53731.1"
                     /translation="MIARYTRPEMGRIWSDENRFRCWLQVEVAASLTLAVAGIVPRDA
                     ADAIAQRGDFDLKRIQDIEAEVKHDVIAFTTAVAEKVGPEARWLHYGLTSNDVVDTAQ
                     ALQIKEASKIIRADLERLKEVLGRRAQEFRHTPIIGRTHGIHAEPTTFGLKLANWYAE
                     VVRDIARFERSAEEMRVGKLSGAVGTFAHLEPEFEEKICRRLGLEAAPISSQVIQRDR
                     HAYFVATLATIAATLDKIATEIRHLQRTEVREAEEYFSEKQKGSSAMPHKRNPITCEQ
                     ICGLARVVRANAQAAFENVALWHERDISHSSVERVILPDSTILVDYLLQKTTHLIDTL
                     VVYPNRMLKNLESTGGLVFSGQLLLDLAEHGMSREDAYRLVQKHAMRAWKEDLNFREQ
                     VMADPEITGRVPREQIDQAFDLKRQLRNVDKIYARVFGS"
     gene            5472..>6457
                     /locus_tag="VE783_09795"
     CDS             5472..>6457
                     /locus_tag="VE783_09795"
                     /inference="COORDINATES: protein motif:HMM:NF039822.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5666 domain-containing protein"
                     /protein_id="HYX53732.1"
                     /translation="MCKRAILIIPAVLISLLIAGCAKGGGLQADTGGGSNGTLLLNMG
                     DSLPDQVLALEFTVNNATLSGSTNPVIISTPTKVEFIRNAAKFETVAIPNLPAGTYTA
                     ITFTLSAPVTTIADPVSHTIVPVATLLTNATVPISLGSGVVVGSTPVTLNLELNTASS
                     LLISGTSATLTPAFTVSTANVGATQDDSSGEFDNIKGRITTLGSSSITIQPSNSAQPF
                     TFATNASTQFKNGTTALSVGGIVTIEGVTQSDGSLLARQVEGETVGGSGSEVEGIITA
                     ITGNPATSFSLTAESNIASNAANAPVTGSTVLATPSASVQYSTESATISGTLP"
BASE COUNT         1409 a         1958 c         1799 g         1291 t
ORIGIN      
        1 cggcgtgatc aagggctgga cagaagcgct gcagcttatg cccgtgggat cgaagtggga
       61 gctgtacgtc ccagcggatc tggcatatgg cgatcgcggt gcaggacccg acattggacc
      121 ggattccacg ctgatttttg aagtcgagct gctttcgatc atcccgagcg aagacaagaa
      181 gccggccgag ccggcaaagc cggaagggga aaagaaacct agcacaggga agtaaaccac
      241 gttaacgatg aaagctgagc cgccggccta aacgctggcg gctttcgttt ttgcagaacg
      301 cctcttagtt ttgccggcgc gcttcgccgc gcgtgttttg gtttgcgctt tgaaacacgc
      361 ttcaatctgg cgaatgtgat tgatgtcgtg cccagcggtg agctttatca gccgcgtaat
      421 gctttcctcg ccgcgctcgg cgtgcatgcc gtagttgttc cagagctcac gcgagactgc
      481 cttgagcagt accagattac cttcacgagc gccacggaac gttccgaatg attgtttcgc
      541 atcgcgcttg gaataccgga acttctccgc ccataggtcc tgatcgtagg cctggatcgc
      601 aacgccgtta ctggcgagaa tctggcgcag gcgccaggcc accacagttt ccgtgtcgga
      661 gaggtgagcg tagatttcgc ccgcggacca ctttccggga gcgggacgcc gcgaaagctg
      721 ctgcttgctt tttccgcgca gcaaagcggc gagcctggtg agcgactcac gctgcaggcg
      781 cagaggatct ttgtttccgg tatagctgat tagccgttcg atgtactgct ctgccgtttc
      841 ctgcatcgtt tctccttagt gctgctttac agtgtgcctg agggcaggga gctttgggaa
      901 gacgattggg gaccagcaga gctgaatcca gattcgagaa agattcatct aacgatcatt
      961 gaccgcaccc atggaactta ccgtttactc tgccccctgg tgccgcgact gccacatagc
     1021 taaacgctgg ctgctgcagc acagaattat gtttaaggaa gtcaacattg aggaagtgcc
     1081 cggtgccgct gaagaggtaa tccgcaacac cggcaagcgc gcaatcccac agtttgtggt
     1141 gaacggccgc tggattcagc cttacacacc cggacagggc ttcaagttcg tggaaatggc
     1201 tgaactgttt ggagtgaccg gcggagcgca gtaagccgtc tgcacgcttt gcaaagaaag
     1261 cggagcttcg cggctccgct tctatggtct atcttcgcaa cgaattagtc agctgacctt
     1321 ttccgcgggc tcatccttct tgtctgttgg tccgcgccag cgtagcgagg ccggcattct
     1381 caggcgcaga acgcgttcgc gatggtgctc ctcttccaag ctgagttcgc gcgcccggag
     1441 cagatcttca atcgcgacca tgcccagcaa ctctgcctca gcaccctgcc tgaccacagg
     1501 gaatcgagtg agttgcgtgg tggccatgcg gttgaccacg acccgcaagg gctcctctgg
     1561 atacgcaacc acaggctctt ttgctaccag gtcggcaagg cgcaggtgcg cgacttcgct
     1621 ggcgtccacg ctggcgacga ttttggtgag atcgccgcgc gtaatcactc ccacaaggtt
     1681 tcgatcctgg tcgatcaccg ggtaaacgcg ctgaccgcgg ccattttctg aatggtcgac
     1741 cgcctggcga acttcggcta gagtgctctc cgccgggagt gcagaaatgc tggtacgcat
     1801 cacgtcttcc acggccagca cttccatggg atcgaccaca tactcacggg tcaggtgatg
     1861 tccgcgacgg ctgagcttct ccgtcaggat tgagcggggc agcgtaagcg cggtaaacgc
     1921 gtgggccgtc atgcaggcca gcagcagcgg gaaaatcgag tggtaatcac tcgtaagttc
     1981 gaaagcaaac atcactccgg taagcggagc gcccagagcg ccggagagaa tcgctcccat
     2041 gctgataagc ggccagaagc ccaggccttg attgggcagg aacaatgctt ccagcgcgcc
     2101 caacgagccg cccatcatca gcaacggcgc cagaacgccg ccggatgttc ccgagcccag
     2161 cgaaaccgcc cagatcactg atctcaccag cagtacaccc atgatcagct taagggtgaa
     2221 gttacccttc agcaggtcgc ctatcacgtc ataaccaaca ccaagcgcgc gcggatagat
     2281 cagaccgccg actcccacca cggcgccgcc aatggctggc caccacatcc agtggatttt
     2341 tttcaggtga gcaaagccgt cttcaacgcc ataaacaaag ttgctcagca gccccgctag
     2401 agctccggca agcaggccgc taagcaggca tccgaacatc acggccgggc tgaacgtgac
     2461 ttcatgcggc gggacctgaa agattggccc gggaccaagc aactgtatgc gcgctgcctc
     2521 ggcagcaacg ctggccagca ccacggggat gaagctgcgc ggcttccatt caaacagcag
     2581 aagctccacc gccagcagca cggccgcaaa cggtgcggcg aacgtagctg acattccggc
     2641 agcggcgccg gcaaccagca gagtcttgcg ctcggcgctg gtgagatgga agaactgcgc
     2701 gattagtgac ccgcaggccc ctcccgtcat aatgatgggg ccttccgcgc cgaacggccc
     2761 gccagaacca atggcgatgg ccgccgagac tggcttgagc accgctacac gtggctcaac
     2821 cttcgcgccg cgcagcagga tggcttcaat cgcttcagga atcccatgac cgcggatctt
     2881 gtccgaaccc caccgcgcca tcagtccaac gatcactccg ccgataatcg ggacaaaaaa
     2941 tgccagccag ccaggatggt gcaatgcaag tgaaacctgc cggagcggcc acaccgcgtc
     3001 tgccggagac ctgaaatccg tactcagggt ctgataaaaa aataagttgg taaaaaagcc
     3061 aataagcttc agcagcgcta cggcgacgta agccgccacc acgcctatca ccacagcgag
     3121 tcctgagatg ggcagcactc gccaggttgt ggaaaaatcc cggagcctga cgccggggta
     3181 ggaagcctga tttacagcac tggaccgaac aatgggggac cgatctttca tgtacctgct
     3241 ttcttggatg cagccaggcg tttcgtgcct gcccgtgcgg cgtgcttccc tgtattttcg
     3301 tttgtgaggc gaatcacgga atctaccagc atggggccaa tgctgcgcag ttcctgccgt
     3361 gccgcggagc cgagccgccg caacatggca tccccgtcag aggtgatcat gagcgtgacc
     3421 tgcctgcgat ctgagccgga gcgggcgcgc ttgagcagcc cgcgttcctc gcaacgatct
     3481 accagttcca ccgtgctgtt atggttcagt tgcattcttt ccgcaatgcg gctgatggtc
     3541 ggcacctggt cggaaggaag gcccttgatg gcaagaatca cctggtactg ctgaggattc
     3601 acccccaact cccggacctc atcctccata tgccgcaaaa accggcgcaa ctggtagcga
     3661 aactcggcca aagccatgta ttccgtttcc agaagcggcc gtgatttttt ttctttgatc
     3721 atttaatcgc tccacgatat aatagcaata ttctgctaga ttcgagccgg gcccttttcc
     3781 gggcgcgtat ggacggaaaa gggcccaaaa tattttccga ttcacttcaa caagcggttt
     3841 tgaacccgaa gccggcagcc gggaggttgg cgccagcagt cccccatctt tacaacttcg
     3901 ttgcatcaca ttatggcttt aaagccggct tctgcctagc acatttgacg gattcccgtc
     3961 cgctccgttt atgatcagtg ttccacccta tctgcactga ccaggagacc tcccctttga
     4021 tcgctcgtta tacccgtccc gaaatgggac gcatctggag tgacgaaaac cgtttccgct
     4081 gctggcttca ggttgaggtc gctgccagcc tcacgcttgc cgttgccggc attgtgcccc
     4141 gggacgccgc tgacgccatt gctcaacgcg gcgacttcga tctcaaacgc attcaggaca
     4201 ttgaggccga agtaaagcac gacgtaatcg ccttcaccac cgcggtcgcc gaaaaggtag
     4261 gccctgaagc tcgctggctg cattacggcc tgacctccaa tgatgtggta gataccgcac
     4321 aggctttgca gatcaaggaa gcttcaaaga tcatccgcgc agatctcgaa cgtctgaagg
     4381 aagtgctcgg acgccgtgcg caggagttcc ggcatacgcc gatcatcggc cggacgcacg
     4441 gcatccatgc cgaacccacg accttcgggt tgaagctagc caactggtac gcggaagtgg
     4501 tgcgcgatat cgcgcgcttt gagcgctcgg cggaggagat gcgggttggg aagctctccg
     4561 gcgccgtggg aacgtttgct caccttgagc ccgagttcga agaaaaaatc tgccgacgcc
     4621 tcgggctcga ggctgctccg atttcgtccc aagtcatcca gcgcgaccgt catgcttact
     4681 tcgtcgctac gctggcgacg atcgctgcca cgctcgataa gattgccacg gaaatccgcc
     4741 acctgcagcg cactgaggtc cgcgaagctg aagagtactt cagtgaaaag cagaaaggct
     4801 cctcggccat gccgcacaaa cgcaatccca tcacctgcga gcagatctgc gggctggccc
     4861 gggtggtgcg cgccaacgcg caggcggcat ttgaaaatgt ggcactctgg catgaacgcg
     4921 atatatcgca ttcgtcggtt gaacgtgtca tcctgcccga ttcaaccatt ctggtcgact
     4981 atcttttaca gaagaccacg cacctgattg acacgctcgt ggtctatccc aaccgcatgc
     5041 tcaagaatct tgagagcacg ggagggctcg tctttagcgg ccagcttctg ctcgacctgg
     5101 ccgagcacgg gatgtcgcgt gaagatgctt accgcctcgt ccagaaacat gccatgcgcg
     5161 catggaaaga ggacctcaac ttccgcgagc aggttatggc cgatcccgaa ataaccgggc
     5221 gcgtaccacg cgagcagatt gaccaagctt tcgacctcaa gcgccagctg cggaatgtgg
     5281 acaagatcta tgcgcgggtc tttggcagct gaaagccggg aaaactgaaa aactgagacc
     5341 ctgatccaga ggcctgtgca tgtactaaag gggttcttag ttactgatgc tgcgtcttgt
     5401 aatctctttt tcgcgtgcta agctttgctg gaaagcccat ttatagcggc cgaaacatgc
     5461 cggaggcccc aatgtgcaag cgcgccatcc ttatcattcc tgccgttctt atttcccttc
     5521 ttattgcagg ctgcgccaaa ggcggcggtc tccaggccga caccggcggc ggaagcaatg
     5581 gcacgcttct cttgaatatg ggcgactctc ttcccgacca ggtgcttgcg ctcgagttca
     5641 cggttaataa tgcgaccctt tcgggtagca cgaatcccgt cataatctcc actcccacga
     5701 aggtggagtt cattcgcaac gcagccaagt tcgaaaccgt ggccatccca aatctcccgg
     5761 cgggaaccta caccgccata actttcaccc tctctgcgcc ggtgaccacg attgcagatc
     5821 cggtttccca cactatcgtt ccagtggcta cgctactcac caatgccaca gtccctataa
     5881 gtctgggctc gggagtggta gtaggttcca cgccggtgac gctgaacctg gagctgaaca
     5941 ccgccagctc gctcctgatc agcggcacat cagcgacgct gacgccggct ttcaccgtat
     6001 ccacagcaaa cgtgggcgcg actcaggacg acagcagcgg cgagttcgac aacatcaaag
     6061 gccggatcac caccctgggc agttccagca tcaccattca gcccagcaac agtgcgcaac
     6121 ctttcacctt cgccaccaac gccagcacgc agttcaagaa tggaaccacc gcattgtcag
     6181 tgggtgggat cgtaaccatt gaaggcgtca ctcaaagcga cggctcgctt ctcgcccgcc
     6241 aggtggaagg agaaaccgtg ggcggcagcg gctctgaagt ggaaggcatc atcactgcga
     6301 tcaccggaaa tccagctacc agttttagct tgacagcaga atcgaatatc gccagcaatg
     6361 ccgccaatgc gccggttacg ggcagcacgg tccttgcaac cccgagcgct tcagtccaat
     6421 acagcactga aagtgccacc atttcaggca cgctgcc
//
LOCUS       DASQYP010000303        11509 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_310444, whole genome shotgun sequence.
ACCESSION   DASQYP010000303 DASQYP010000000
VERSION     DASQYP010000303.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 11509)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11509)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11509
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_310444"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(133..417)
                     /gene="gvpA"
                     /locus_tag="VE783_09800"
     CDS             complement(133..417)
                     /gene="gvpA"
                     /locus_tag="VE783_09800"
                     /inference="COORDINATES: protein motif:HMM:NF006874.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0012506 - vesicle membrane [Evidence
                     IEA];
                     GO_component: GO:0033172 - gas vesicle shell [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="gas vesicle structural protein GvpA"
                     /protein_id="HYX53733.1"
                     /translation="MAVERVSGGSSLIDVLDRVLDKGIVIDAWVRISLVGIDLITVEA
                     RVVVASIDTYLKYADAVGLTGLVSRPTLAEGAETQEEVVEVTTRPTRRRR"
     gene            complement(443..763)
                     /locus_tag="VE783_09805"
     CDS             complement(443..763)
                     /locus_tag="VE783_09805"
                     /inference="COORDINATES: protein motif:HMM:NF012944.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gas vesicle protein"
                     /protein_id="HYX53734.1"
                     /translation="MQQRVPTVSGTANLLDILDRVLDKGLVIAGDIRVSLANVELLTI
                     RIRLLVCSVDKAEQIGLNWWKFDPNLTAPAMETSARRAELPAPAPGTKVRIAARKSTN
                     RKRK"
     gene            complement(993..1352)
                     /locus_tag="VE783_09810"
     CDS             complement(993..1352)
                     /locus_tag="VE783_09810"
                     /inference="COORDINATES: protein motif:HMM:NF016977.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gas vesicle protein K"
                     /protein_id="HYX53735.1"
                     /translation="MSELRKVTPEEIATAVAELNRELKAVGQSSVDRIDCSPENIEQG
                     LARLVLGLVELLRRLLERQAIRRMEGGSLEDAKIEEMGQALMRLEAKVNEIAAAFGLR
                     PEDLNLDLGPLGNLLDK"
     gene            complement(1345..2019)
                     /locus_tag="VE783_09815"
     CDS             complement(1345..2019)
                     /locus_tag="VE783_09815"
                     /inference="COORDINATES: protein motif:HMM:NF018129.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031411 - gas vesicle [Evidence IEA];
                     GO_process: GO:0031412 - gas vesicle organization
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GvpL/GvpF family gas vesicle protein"
                     /protein_id="HYX53736.1"
                     /translation="MSRVLAYCAYLERHGLTPAESGVEKSSVHILESERLRLLWSEIP
                     WPFQPEHLQQNAVEFHEVVHRLFRQVAVVPFRLLSTFEDRQLLERFVAEHRSALVADL
                     ERLEPFVQMEAVVYTVAEKSVAAASGKEYLQAKAQQANAVREHAQMLRDRVAEISADV
                     HLRENKNGIRLFALVRRGAEQKFKETITQLEIPKGLSRRVSGPWPTAEFMSGEVKMPA
                     LVTRNE"
     gene            complement(2016..2240)
                     /locus_tag="VE783_09820"
     CDS             complement(2016..2240)
                     /locus_tag="VE783_09820"
                     /inference="COORDINATES: protein motif:HMM:NF012944.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gas vesicle protein"
                     /protein_id="HYX53737.1"
                     /translation="MEPITLGGSTEDEVSLLDILDHVLNAGVVLHGSLVISLAGVDLV
                     YLGLNVVLTSVETALRNLEAGGVIEKRTGK"
     gene            complement(2242..2997)
                     /locus_tag="VE783_09825"
     CDS             complement(2242..2997)
                     /locus_tag="VE783_09825"
                     /inference="COORDINATES: protein motif:HMM:NF018129.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GvpL/GvpF family gas vesicle protein"
                     /protein_id="HYX53738.1"
                     /translation="MANAKVAPAEALYLYGISPAQQAPAKIGRAGIDGAHPIEAMPCG
                     QFLCWVSRVDQAAFSRELETNMENLDWLAVHGVRHQEAVGEIARTMTVVPARFGTLFS
                     GAKALEQNVRARKAALTKAFEKIVGADEWGVKVFNARQPQATLATPVAASGRDYLQQK
                     AARIKRRAESGTEDLKELADALARVASDSAPSGKVSGGQADLVWQATFLVPRKKHAEW
                     NRVLQEFVQRWSSTRRIEVSGPWPPYSFVADAG"
     gene            complement(2979..4907)
                     /locus_tag="VE783_09830"
     CDS             complement(2979..4907)
                     /locus_tag="VE783_09830"
                     /inference="COORDINATES: protein motif:HMM:NF014433.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ArsA family ATPase"
                     /protein_id="HYX53739.1"
                     /translation="MARLTFVVGKGGVGKTTVASALALHEAATRPKSNVLLMSTDPAR
                     SLRNVLQVRLGPGATKVKLPRARLAAWQIDAEREFTKFLRTNRESILEIVESGTIFTR
                     DEVAPLLDTALPGMAEMAGLLALDDLLTAGDYNRIIVDTAPFGHTLRLLEMPAHFQRF
                     LDFLEIASQRDAVLAQTFTRRRRTIENPFVQRWRAAVERLRSVFENGEAELLVVTSPE
                     ASSLNQAARWLKALKQSGPALPVGALVLNRVITTRSRCAFCKKRFAAAERARKLLTKE
                     FPGRELFIGRDPGNPILGIEALRAFGALVFAGRNTRLERKPPPSNPVRFKIAEWPALP
                     QRLALTSGKGGVGKTTVTAALAFCGRSNEKTVPVTVCSTDPAPSLDDVFRTEVGNQPV
                     PVLEDSRFAAMEMDSLAEYESWSRQMQQRLTQDLSMQAGGLHVDLSFEREVFAALLKV
                     VPPGVDELLAIFKIIDLLDSGSGRIFIDMAPTGHALELLRMPERMLNWSRLLLKSLSA
                     HRTLALAQDVAVELATLGQRVRRLLELMRDPGRASMAVVMLAEPVPDAETRRLIKAIE
                     ELGIPVQSLFVNRVQVQTARSCQICSRRRAWQMATLSKMRLSHAVEHVYVAAEHAAEV
                     SGVAALRSFTKHLWQMQK"
     gene            complement(4990..5463)
                     /locus_tag="VE783_09835"
     CDS             complement(4990..5463)
                     /locus_tag="VE783_09835"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53740.1"
                     /translation="MKCLLPVVLLAASLAAAEKKPLIRICVGPLDNHSSYQLPIEKLR
                     ADFVTQLSHKNVKAVMTEGGDPVTERTKNNCDYLVAGEFTDFISLKSGETVNLGGVIV
                     DNKKKFAQRFKYALRERGGEKPVYSRKEDIIDKNPKTCADDQIYLATKHVREYFK"
     gene            complement(5580..5669)
                     /locus_tag="VE783_09840"
     tRNA            complement(5580..5669)
                     /locus_tag="VE783_09840"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(5633..5635),aa:Ser,seq:gga)
     gene            complement(5812..6132)
                     /locus_tag="VE783_09845"
     CDS             complement(5812..6132)
                     /locus_tag="VE783_09845"
                     /inference="COORDINATES: protein motif:HMM:NF018894.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0035438 - cyclic-di-GMP binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PilZ domain-containing protein"
                     /protein_id="HYX53741.1"
                     /translation="MKESRSSVRFPLKLPITVRTADAREHFAETADISAGGVLFHTRS
                     LLDVGTVIGFRIVLPASVLGTDTDVLVNCKGRVVRSQSEQGKSAVAAVIDEYFFERIF
                     SAAV"
     gene            complement(6234..7613)
                     /locus_tag="VE783_09850"
     CDS             complement(6234..7613)
                     /locus_tag="VE783_09850"
                     /inference="COORDINATES: protein motif:HMM:NF039907.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TldD/PmbA family protein"
                     /protein_id="HYX53742.1"
                     /translation="MVDQARAGEIFQRIKKFASVQEVETIFSSTDFSLTRFANNTIHQ
                     NVSELNEQVSIRVALDGKTARATTNRFDDDSLKRAVQAAESMARVQDPDPDRLPMAEA
                     SAASGSAGPSRWFDETAAITPGDRADAVGEIVGVAKKNLLITAGIYSSAQHQEGIFNS
                     NGLSAWHRQTSSEVSITMLADDSSGWQKANFPDVRQLQPVELAEIAAKKARDSQKPQE
                     LAPGKYTVILEAAAVLDAVGFMFMDFGGLAILDQRSFLNNRIGTKLFGENITVVDDVD
                     YRLQTNSPFDGEGVRRKRVNLVENGVVKNLVYSRSTAEKMKNSEFADKVGEIAVTGHG
                     FPLPNEIGEAPMNIVFLTSGGEQTVDQMIAATERGILVTRLWYIREVDPYEKILTGMT
                     RDGTFLVENGKLKCGIRNFRFNQSLIEMLTHVEALGRPVRASGEEAFDMVVPAMKVSG
                     FNFTEVTRF"
     gene            complement(7652..9118)
                     /locus_tag="VE783_09855"
     CDS             complement(7652..9118)
                     /locus_tag="VE783_09855"
                     /inference="COORDINATES: protein motif:HMM:NF039907.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TldD/PmbA family protein"
                     /protein_id="HYX53743.1"
                     /translation="MKQIADWALNTATQRGASYADLRIVDDRQRSLATKNGKVGHAAS
                     GESLGIGVRVLVDESWGFAATDDLSRGAVERTAAKAVEIARASALVKESPIRLAPEPA
                     VKIEWATPCRIDPFTTSVEQNLDLLTRIDHELLKVKGVTLVESNLHFGRYEQWFYSSE
                     GSDIHQTRYMTGAGFAAISFAGTEIQKRSYPNSFGGQYQCKGYELIDELKLVENARRI
                     GEEAVALHKADQCPQGNMDLVLDSSQLGLQIHESIGHPIELDRVLGMEANFAGTSFLT
                     LEKLRTLRYGSDVVNVVADATEQHGPGLGTFAYDDEGVAAQCTPIISNGLFTGYISSR
                     ETAETIGEHRSNGCMRAEGWNRIPLIRMTNISILPGEKPLSFEQLVAGTDHGIFMQTN
                     RSWSIDDKRYNFQFGTEIAWEIKGGKLGRMLKNPSYSGITTEFWNSMEAICSRDEWTL
                     WGTPNCGKGQPMQTMGTGHGASPARFKNVKIGTAYKGN"
     gene            9183..9539
                     /locus_tag="VE783_09860"
     CDS             9183..9539
                     /locus_tag="VE783_09860"
                     /inference="COORDINATES: protein motif:HMM:NF013844.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Smr/MutS family protein"
                     /protein_id="HYX53744.1"
                     /translation="MSRKPALIKIVNLEEGMPTVHQARLRLEHELATARKQGYTAVKL
                     IHGYGSSGAGGVLRTELQKDLREAEAQGVVQAAIAGEQWRTSEEKCWILLQRYPEWKQ
                     DSDLGRNNRGISMVVL"
     gene            9622..10752
                     /locus_tag="VE783_09865"
     CDS             9622..10752
                     /locus_tag="VE783_09865"
                     /inference="COORDINATES: protein motif:HMM:NF025330.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="kelch repeat-containing protein"
                     /protein_id="HYX53745.1"
                     /translation="MDRRAKLGLAFLLVFCVFVLLAVTSIPRTHSGSLFLVASTEVPR
                     FAHTATLLKNGRVLIAGGMARNGEWLDTAELYDPEHERFTPTGVMLARRAGATATLLP
                     NGKVLIAGGNDGESSLATAELYDSTTNRFFPAGKMTSSRGHAQAVTLSNGKVLIIGGN
                     AEGDSQQLTSAELYDPATNKFTSTGSMQHPRSYFTSVRLHDGRVLVAGGMSGGHYPDQ
                     RIEATAEIYDPSTAHFSPAGNMAVPRYKLGSVLLQDGRVLIAGGSDSHDWRSMYASTE
                     IFDPQSGTFNRGPQMKNRRFKLAQGILSLPDGRVLIAGGASELEMYDPSMRRGIEIAA
                     ASLDGFFYSTTTLLEDGRVLIVGGYGTNPQAGAVRHAWIWKP"
     gene            complement(10829..>11509)
                     /locus_tag="VE783_09870"
     CDS             complement(10829..>11509)
                     /locus_tag="VE783_09870"
                     /inference="COORDINATES: protein motif:HMM:NF004005.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004013 - adenosylhomocysteinase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenosylhomocysteinase"
                     /protein_id="HYX53746.1"
                     /translation="TMDGVIRCTNSLIAGSKFVVAGYGWCGRGLASRARGMGADVIVT
                     EIDPTKAIEAVMDGYRVMSMAEAAKIGDIFVTVTGNKNVVRREHFDVMKNGAVVANSG
                     HFNVEIDIPSLEKMASSKRQTREFVDEYAMKDGRKIYLLGEGRLINLAAAEGHPASVM
                     DMSFANQALSCEYLVQNHKSLEKKVYPVPEDLDKKVARLKLESMGVKIDRLTPEQEEY
                     LASWSEGT"
BASE COUNT         2339 a         3573 c         3122 g         2475 t
ORIGIN      
        1 tctcttccga gcgttccgcc tccagcaagc gaagggaggc aggccgcctt tgcacacgac
       61 cacggttagg acgttcgggt tgaaaccgca tttcggccgt ggccacaggt cctcccaaag
      121 tccaaaccta ctttaccgcc gccggcgggt cggccgagtc gttacttcca ctacctcttc
      181 ctgagtttcg gcgccttcgg cgagggtcgg acgcgatacc agtccggtga gacccacagc
      241 atcagcatac ttcaggtacg tgtcaatcga agcgactacc acgcgggctt ccaccgtaat
      301 cagatcgatg ccgaccagcg aaatgcgcac ccaggcatcg ataacgatgc ctttgtccag
      361 cacccggtcg agaacgtcaa taagacttga gccaccggat acgcgttcaa cggccatcta
      421 aggcctcctt caaacagagt cgttatttcc gctttcgatt cgtgctcttt cgcgccgcta
      481 tcctcacctt ggttcccggt gccggcgccg gaagctccgc ccgccttgca gaggtttcca
      541 tggccggtgc cgtcaggtta gggtcgaact tccaccagtt cagtccgatc tgctcggctt
      601 tgtccaccga acagaccagc agcctgattc gaatggtcag cagttccaca ttcgccaggg
      661 atacacgtat gtcacccgcg atcacgaggc ctttatcgag cacccggtcg aggatgtcca
      721 gcagattggc cgttccagaa acggtaggaa ctcgctgttg catgttctct caggaatata
      781 cagaggagga tcgccttaga cgatgggaca ccaggcgcga tccacgtcaa ggcatcctaa
      841 ccgtcgcact gcgagctgtc aacttacagg tagttcaacc gcctcacccc gcaccccagc
      901 ttgtattgct taaccggcag gtcttgagat gcaaaacgtg atctgctggt tggccgagtg
      961 gccaatgcag cctgggccaa ctcacacatg ccctatttat ccagcaggtt ccctaaagga
     1021 ccaagatcaa ggttaaggtc ctccggacga agtccgaaag cggctgcgat ttcgttcacc
     1081 ttggcttcca gccgcatcaa ggcctgtccc atttcttcga ttttggcatc ttcaagcgag
     1141 ccgccctcca tgcgccggat cgcctgccgt tccagcaaac ggcgcagcag ctcgacaaga
     1201 cccaagacca gccgcgccag cccctgctca atgttctcgg gcgagcaatc gatgcgatca
     1261 acgctgctct ggccaactgc cttgagttcg cggttcaact cggctactgc cgtggcaatc
     1321 tcttctggag taactttgcg caactcactc atttcgggtc accagcgcgg gcattttaac
     1381 ttctccactc atgaactccg ctgtgggcca cgggccactt acccgccgcg aaagcccttt
     1441 cggtatctcc agttgggtga tcgtctcttt gaacttctgc tctgcgccgc gcctcaccag
     1501 cgcgaacaga cgaatgccat tcttgttctc gcgcaggtgg acatccgcgc tgatttcagc
     1561 gaccctgtct cgcagcatct gtgcgtgttc cctcaccgcg tttgcctgct gcgctttggc
     1621 ttgcaggtat tctttccctg atgctgccgc gacggatttt tccgcaactg tatagaccac
     1681 cgcctccatc tgtacgaacg gttccaaccg ttcaagatct gccaccaggg ctgagcggtg
     1741 ttctgccacg aatcgctcca gcaactgacg atcttcaaat gttgagagca gcctgaatgg
     1801 cacaacggct acctgccgga acaagcggtg aaccacctca tggaactcta cggcgttctg
     1861 ttgcaggtgc tccggctgaa acggccaggg aatctccgac cagaggaggc ggagccgctc
     1921 actttcaaga atgtgtacgg agctcttctc aacgcccgac tccgccggtg tgagaccgtg
     1981 acgctcaaga taggcgcaat aagccagcac gcggctcact tgcccgtccg cttttcgatc
     2041 acgccgccgg cttccagatt acgcagcgcc gtctccaccg aggtaagcac cacgttgagc
     2101 ccgagataga cgagatcaac gcccgccagc gagataacca gcgagccatg cagaaccacc
     2161 cccgcgttga gcacgtggtc aaggatatcg agcagggaga cctcgtcctc agtgctcccg
     2221 cccagcgtga tgggttccaa atcagcccgc atctgcgaca aaagaataag gaggccacgg
     2281 cccgcttact tcgatgcggc gcgtgctact ccaacgttgg acaaactcct gcaatacccg
     2341 gttccattcc gcgtgcttct tgcgcggaac cagaaatgtg gcttgccaga ccaggtcagc
     2401 ctgccccccg ctcactttac cactgggagc agaatcgctg gccaccctgg ccagggcatc
     2461 cgcaagctcc tttaagtctt cagtgcctga ttccgcccgg cgcttgatcc gcgcagcctt
     2521 ctgctgaagg tagtcgcgcc cagacgccgc aaccggcgtg gcgagcgtgg cttgtggctg
     2581 gcgcgcgttg aaaactttta caccccactc atccgctccc actatctttt cgaaagcctt
     2641 ggtcagcgct gcctttcgtg cgcggacatt ttgctccagc gccttggcgc cggaaaaaag
     2701 cgtgccaaat cgtgcgggaa ccaccgtcat tgtgcgcgca atctcaccta ctgcctcctg
     2761 gtggcggaca ccgtgcactg ccagccaatc caggttttcc atgttggttt caagctctct
     2821 ggaaaatgcg gcctggtcta cgcgcgaaac ccagcagagg aactgcccgc aaggcatagc
     2881 ttcgatcggg tgcgcgccgt caatcccggc cctgccgatt ttagccggcg cttgctgcgc
     2941 cggagagatg ccatagagat aaagcgcttc cgccggggct acttttgcat ttgccataga
     3001 tgtttcgtaa agctgcgcag cgccgccacc ccgctcactt cagctgcgtg ctccgcagcg
     3061 acgtaaacgt gctcgacagc atgcgaaagc cgcatcttgc tgagcgttgc catttgccat
     3121 gcccgtcgac ggctgcaaat ctggcatgat ctggcagtct gcacctgcac gcgattcaca
     3181 aacagagact gcacgggaat gccaagttct tcaatcgcct tgatcagccg ccgggtctcg
     3241 gcatcgggca caggttcagc cagcatgacc actgccatgc tcgcccgccc aggatcgcgc
     3301 atcagttcca ggaggcgacg cacccgctgc ccaagcgtcg ccagttcgac ggcgacgtct
     3361 tgcgcgagag ctagtgtacg gtgggcagaa aggcttttca ataaaaggcg gctccagttg
     3421 agcattcgtt cgggcatgcg cagcagttcc agggcatgtc ccgtgggcgc catgtcgatg
     3481 aatatcctgc cgctcccgct gtcgagcaag tcgatgatct tgaagatggc cagcagttcg
     3541 tctacgcctg gcggcacaac tttgagcagg gctgcaaaca cttctctctc aaagctcagg
     3601 tccacgtgca acccgccggc ctgcatgctc agatcctgtg tgagccgctg ctgcatctgc
     3661 cgcgaccagg attcgtactc ggcgagggaa tccatttcca tggcggcgaa gcgcgaatct
     3721 tcaagcaccg gcaccggctg attccccacc tcagttcgaa acacgtcatc cagtgagggc
     3781 gcggggtctg tagagcagac cgtcaccgga acggtctttt cgttggatcg tccgcaaaac
     3841 gccagcgcgg cagtgacggt agttttccct actccgcctt tgccggacgt gagcgcgagg
     3901 cgctgcggta gtgcaggcca ttccgcgatt ttgaaacgaa ctggattcga tgggggcggc
     3961 ttgcgctcga gcctcgtatt gcggcctgcg aacacaagag cgccgaatgc ccggagcgct
     4021 tcaattccga gaattggatt tccgggatca cgcccaatga acagctctcg cccggggaac
     4081 tcctttgtta gcaacttgcg tgcgcgctcc gctgcagcaa agcgcttctt gcagaaagcg
     4141 cagcgggacc ttgtcgtaat aacgcggttc aataccagcg cgcccaccgg gagtgccgga
     4201 cctgattgct tcagagcctt cagccaacgc gccgcctgat tcagggaaga cgcttccgga
     4261 gaagtaacca ccagcagctc ggcctcgccg ttttcgaaga cactacgcag gcgctccacc
     4321 gctgcgcgcc agcgctgcac gaacggattc tcaattgtcc gcctccgccg ggtgaaagtc
     4381 tgagcgagca cggcatcgcg ctgtgatgcg atctccagaa agtcgagaaa acgctggaag
     4441 tgcgccggca tctccagaag ccgcagtgta tggccgaacg gcgctgtgtc aacgatgatg
     4501 cggttgtaat cgccggctgt cagaagatca tcaagggcca gtagccccgc catctctgcc
     4561 atgccgggaa gtgccgtatc aaggagcggc gcgacttcat cgcgggtgaa gatggttccg
     4621 ctttccacga tctccaggat cgactcgcgg ttggtgcgca gaaattttgt gaactcccgc
     4681 tccgcgtcta tctgccacgc tgcgagacgc gctcgtggca attttacttt tgtcgctccc
     4741 ggcccgagcc tgacctgaag cacgtttcgc agcgagcgcg ccggatcggt ggacatgagc
     4801 aggacattgc tcttcggccg tgtagccgcc tcatgcagcg caagcgcgga agcaacggtc
     4861 gtcttgccta ccccgccctt tcccaccaca aatgtcagcc tggccacgag ggagattgta
     4921 aagggtgctg ctgttattgg cctttaagac cgccttccgc cgcgatgctg gcgctcacta
     4981 gcgccttctt tacttgaagt actcacgcac gtgcttcgta gctagataaa tctggtcgtc
     5041 agcgcaggtt ttgggattct tgtcgatgat gtcttcctta cgggagtaga ccggcttctc
     5101 gcctccgcgt tctcgcagag catatttgaa gcgctgagca aacttcttct tattgtcgac
     5161 aatgactccg cccagattga ctgtttcgcc tgacttgagc gaaatgaagt cggtaaattc
     5221 gcccgccacc aggtagtcac agttgttctt cgtcctctcg gtcacagggt cgccgccttc
     5281 ggtcatcact gctttaacgt tcttgtgact gagttgcgtg acgaagtcgg ctcggagctt
     5341 ctcaatcggg agctgatagc ttgagtgatt gtccagcggc ccaacacaaa tccggatgag
     5401 cggcttcttt tcagccgccg caagactcgc agcaagaagt acaactggca gaaggcattt
     5461 cacaatgcgg attgtttcat agccaggaaa gagggtgaag caaaattcct ggcgcagcaa
     5521 cgagcgctgc cggcagtcgt ttgggtcgct gatgtttact atgctaactg cctggtttat
     5581 ggcggagaga gtgggattcg aacccacgtt agagtttccc ctaaacacgc tttccaagcg
     5641 tgcgccttca gccactcggc catctctccg acgccacggg tgggacagcc ctcattataa
     5701 cggatgcact gaattcaggc tcctgcgcgc gagcgcccaa acgcaaaaca gacggtccac
     5761 agaggccgcc tgttcggttc aaatcttttt tttaacctgt aacgcgatgg ctcagacagc
     5821 tgccgaaaat atgcgctcga agaaatattc gtcgatcacg gccgctaccg cggactttcc
     5881 ctgctcgctt tgagagcgca ccactcggcc tttgcaattc acgagcacat cggtgtccgt
     5941 gcccagaacc gaagccggca gcacgatgcg aaaaccgatc acagtgccca catccagcag
     6001 cgagcgagta tggaacagaa cgccgccggc agagatatcg gccgtttccg cgaagtgttc
     6061 gcgcgcatct gcggtgcgca cggtgattgg caatttgagg ggaaagcgga ccgagctgcg
     6121 tgattctttc acccagagca cctcactggg aaggttatac aacggcccgc catgccaccc
     6181 tagattactt tggtctttcc gcgcaccaaa ggacatgcgc ggacgcagat gacctaaaac
     6241 cgcgtcacct cggtgaaatt aaagccgctt actttcatcg ctggaaccac catgtcaaat
     6301 gcctcctcgc cgctggctcg aactggccgg cccagggcct ctacgtgcgt cagcatctca
     6361 atcaggctct ggttgaagcg gaaattcctg atcccgcatt tcagcttgcc gttttctacc
     6421 aggaatgtgc catcgcgggt catgccggtg aggatcttct catacgggtc cacctcgcgg
     6481 atgtaccaca agcgcgtcac caggattccg cgctcggtgg cggcgatcat ctgatccacc
     6541 gtctgctcgc cgcctgaagt gagaaacacg atgttcattg gcgcctcgcc gatctcgttg
     6601 ggcagcggaa agccatgccc ggtaacggcg atctcgccga ctttgtccgc aaactcggaa
     6661 ttcttcatct tctctgctgt gctgcgtgag taaaccaggt tctttaccac tccgttttcc
     6721 accaggttca ctcgtttccg ccgcacgccc tcgccgtcaa agggcgagtt cgtctgaagt
     6781 ctataatcca catcatccac gacggtaatg ttctcgccaa agagcttcgt gccgattcga
     6841 ttattcagaa atgagcgctg atccaggatg gccagaccgc caaaatccat gaacataaag
     6901 ccgacggcgt ccagcaccgc agcagcctcg agaatgactg tgtattttcc cggcgcaagt
     6961 tcctgcggct tctgcgagtc gcgcgccttc ttcgccgcga tctctgccag ttccacgggc
     7021 tgaagctgcc tcacgtcagg gaagttggcc ttttgccagc ctgacgagtc atcggcgagc
     7081 atggtgatgg aaacctccga agaagtctgc ctgtgccacg cactcagccc gttcgaattg
     7141 aaaatgccct cctgatgctg tgcgctggaa taaatacccg cagtgatcag caaattcttc
     7201 ttggcaaccc cgacgatttc tcccacagca tcggcgcgat ctcccggcgt gatcgcagct
     7261 gtctcatcaa accaacgcga cggccccgca gatccggacg cagcactggc ttcggccatc
     7321 ggcagccggt ccggatcagg gtcctgcacc cgcgccatgc tttccgcggc ctgcaccgcg
     7381 cgtttcagac tgtcatcatc gaaccggttt gtggtcgcgc gggcagtctt gccatcaagg
     7441 gccacacgga tcgacacttg ctcgttcagt tcggagacat tctggtgaat cgtgttattg
     7501 gcaaagcggg tgagcgaaaa gtcagtcgac gaaaagatgg tttcaacttc ctgaacagaa
     7561 gcgaactttt tgattctttg aaaaatttcg ccagcacgcg cttgatctac cattctgatt
     7621 cttctccgcg tctccgcacc accataagca actaattccc tttgtacgcc gtcccaatct
     7681 tcacattctt aaaccgcgcg ggcgaagccc cgtgtcccgt tcccatggtt tgcatcggct
     7741 ggcctttgcc gcagttcggc gtaccccaga gcgtccactc gtcacgagag cagatggcct
     7801 ccatggaatt ccagaactcg gtagttatgc cggaatacga gggattcttg agcatgcggc
     7861 ccagcttacc gcccttgatt tcccacgcga tctccgtccc gaactgaaag ttgtagcgct
     7921 tatcatcgat tgaccacgag cggttcgtct gcatgaagat gccgtgatcg gtgccggcga
     7981 cgagctgctc aaaactcaac ggcttctcgc ccggcaaaat gctgatgtta gtcatccgga
     8041 tcagcgggat tcggttccag ccttccgcgc gcatgcagcc gttggaacgg tgctcaccga
     8101 tcgtctccgc cgtttcgcgc gatgaaatgt atcccgtgaa aagcccgttg ctgatgatcg
     8161 gcgtgcactg cgcagccacg ccttcatcgt cgtaagcgaa ggtccccagc ccaggcccgt
     8221 gttgctccgt ggcatctgcc accacattta cgacgtcact gccgtaacgt agcgtacgca
     8281 gcttctccag cgtcaggaat gatgtcccgg caaaatttgc ctccatgccc agcactcgat
     8341 ccagctcaat ggggtgtccg atagactcat gtatctgcag cccgagctgc gacgaatcca
     8401 gcaccagatc catgttcccc tgcgggcatt ggtctgcctt gtgtagcgcg accgcctctt
     8461 cgccgatccg gcgcgcgttc tccaccagct tgagttcgtc aatcagctca taccctttgc
     8521 actggtactg tccaccgaag gagttaggat aagaacgctt ctggatctcc gtccctgcaa
     8581 aggagatagc agcgaatcct gcgcctgtca tgtagcgcgt ctggtgaatg tctgagcctt
     8641 cactggaata gaaccactgc tcgtatcggc caaagtgcag gttgctttcg accagagtca
     8701 cgcccttgac cttaagcagt tcgtgatcga ttctggtcag caaatcaagg ttctgctcca
     8761 ccgaagtggt aaacggatca atcctgcacg gggtcgccca ttcgattttt actgcgggct
     8821 ccggcgccag ccgaatgggc gactctttca caagagcaga cgctcgggca atctccaccg
     8881 ctttagccgc tgtgcgctct actgctccgc ggctcagatc gtcagtggct gcaaatcccc
     8941 aggattcatc caccaggacc cgcaccccaa tcccgaggga ttctccgctg gcagcgtgcc
     9001 caaccttgcc atttttggtg gccagcgagc gctggcggtc atccacaatg cggagatctg
     9061 catagctggc gccgcgttgc gtcgctgtat tgagtgccca gtcagcaatc tgtttcatgc
     9121 tcatggcaaa ctccgatcat aaatcattcc acgcagtcgt tccccggcca taaactactc
     9181 tcgtgtcgcg aaagccggcg ctgatcaaaa tcgtgaatct tgaagaaggc atgcccacgg
     9241 tgcatcaggc gcgtttgcgg ctggagcacg agttggcaac cgcacgcaag cagggctaca
     9301 cggcggtgaa gctcattcac gggtatggtt ccagcggcgc cggcggtgtt ctgcgtacag
     9361 aactccagaa agacctgcgg gaagctgaag cccagggcgt tgttcaggcg gcaattgcgg
     9421 gcgaacagtg gcgaacctcc gaagagaaat gctggatcct gctccagaga tacccggaat
     9481 ggaagcagga ctcggatctc gggcgtaata accggggaat cagcatggtg gtgctttagc
     9541 ctgaatcagg cgaaattatt gacgcttttt gagctaacat gcgggcggct tcgcacgtca
     9601 tttagataag tcgaggtgtc catggatcgt cgcgccaagc tgggacttgc tttcctgctt
     9661 gtgttttgtg ttttcgtgct gctggccgtt accagcatcc cccgcaccca ttctgggagc
     9721 ctctttctgg ttgcgagtac ggaagtgccc cgattcgctc atacggccac tcttctgaaa
     9781 aatggcaggg tcctcatcgc gggcggcatg gcccggaatg gcgagtggct ggatacggca
     9841 gagctatacg accctgaaca cgaacgtttc actcctaccg gagttatgct tgcccggcgg
     9901 gcaggcgcca ctgctactct ccttccgaac ggaaaagtcc tgatcgccgg cggcaacgac
     9961 ggagaaagca gcctggccac ggcagagctc tacgattcca ccaccaaccg cttctttcca
    10021 gcaggcaaaa tgaccagctc gcgcggccat gcacaagccg taaccctgag taatgggaag
    10081 gtcctgatca tcggcggaaa cgctgagggg gactctcagc agctcacgtc cgccgagctc
    10141 tacgatcctg ccaccaacaa gttcacatcc acgggaagca tgcagcatcc gcgctcgtac
    10201 tttacgtctg tgcggctgca tgatggccga gtgctcgtcg cgggcggcat gagcggcggc
    10261 cattatcccg accagcgcat cgaagccacc gctgagattt acgatccgtc gacagcacac
    10321 ttctcgccag cgggaaacat ggctgtgccg cgttacaagc tcggctccgt tctattgcag
    10381 gacggcaggg ttttgattgc cggcggctca gactcacacg actggcgcag catgtacgcg
    10441 agtactgaaa tcttcgatcc gcaatcgggc actttcaacc gcggcccaca gatgaagaac
    10501 cgccggttca aactggcgca gggcatattg tctctccccg acggacgggt tctgatcgct
    10561 ggcggcgcca gcgaactgga aatgtacgat ccatcaatgc gtcgcggcat tgaaatagct
    10621 gccgcgtcgc tagacggctt cttctactcg acaactacgc tgctggaaga cggacgggtg
    10681 ctcattgtcg gcgggtatgg aacgaacccg caggcaggcg cagtaaggca cgcgtggatc
    10741 tggaagccgt agcaacggac agccaatcgt gtaataaatc gggcggcctt ctcgaggccg
    10801 cccgattcgt ttcgcactaa agctctgact aagtgccttc gctccagctg gccaggtact
    10861 cttcctgctc cggcgtgaga cgatcgatct tcacgcccat cgattccagc ttgagacggg
    10921 ccactttctt gtccaggtct tccggaactg gatagacctt tttttccagg ctcttgtggt
    10981 tctgcaccag gtactcgcag gagagcgcct ggttggcaaa gctcatgtcc atcacggaag
    11041 cggggtggcc ttcagcggca gccaggttga tcaggcggcc ttcgccgagc aggtaaattt
    11101 tgcggccatc tttcatggcg tactcgtcaa cgaactcgcg ggtctggcgt ttggaggatg
    11161 ccatcttctc gagcgacgga atgtcgattt ccacgttgaa gtgacccgag ttcgccacca
    11221 ccgcgccgtt cttcatcacg tcaaagtgct cgcggcgaac cacgttctta ttgccggtta
    11281 cggtcacgaa gatatcgccg attttggccg cctcggccat cgacatcacg cgatagccat
    11341 ccatgacggc ttcgatggcc tttgtcggat cgatttcggt cacgatgacg tcagcgccca
    11401 tgccacgcgc gcgagaggcc aaaccgcgtc cacaccagcc gtaaccggcg accacgaact
    11461 tgctgcccgc aatcagcgaa ttggtgcaac ggatcacccc atccatggt
//
LOCUS       DASQYP010000304         9553 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_12549, whole genome shotgun sequence.
ACCESSION   DASQYP010000304 DASQYP010000000
VERSION     DASQYP010000304.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 9553)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9553)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9553
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_12549"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..358)
                     /locus_tag="VE783_09875"
     CDS             complement(<1..358)
                     /locus_tag="VE783_09875"
                     /inference="COORDINATES: protein motif:HMM:NF013053.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isochorismatase family protein"
                     /protein_id="HYX53747.1"
                     /translation="MSTISAEPLSRTEAARRLLRAEDCVLSVIDVQEKLLPAIWEKER
                     VVRNSQLLIRLALLLDIPIVASAQYRKGLGETVPEIASLMPDVRVVDKLEFGCFGNAD
                     FCAATASLAGRNTLLVC"
     gene            complement(471..1622)
                     /locus_tag="VE783_09880"
     CDS             complement(471..1622)
                     /locus_tag="VE783_09880"
                     /inference="COORDINATES: protein motif:HMM:NF019500.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005267 - potassium channel activity
                     [Evidence IEA];
                     GO_process: GO:0034220 - monoatomic ion transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="potassium channel family protein"
                     /protein_id="HYX53748.1"
                     /translation="MFHLLSMIFGAILVFTVLWETFETIVLPRRVTRQFRLTRYFYQS
                     TWKPWRSLAGMRSSKKKQDVMLSYYGPLSLLFLLAFWAFTLLLGFAMIHYGAGSEFRG
                     ELYPNRFGNALYLSGTTLFTLGLGDVTPASPLARFLTVLEAGIGFGFLALVIGYLPVL
                     YQSFSRREVTISLLDARAGSPPTAFEMLRRNAGDDMRFDALTDVLREWEKLSADLMET
                     HLSYPVLAYFRSQHDNQSWIASLTAVLDVCALAMVGLEGMCQYQARMTFAISRHALVD
                     LSQVFSAAPDLQASRQRLSPEDLSYMRHHLSSAGVRLLDGDAADAELKRIRALYEPYA
                     ISLARHLRLELPPWLKREGTPKDNWQTTAWQQRQSLSAQEKVAMQDEHF"
     gene            1715..2509
                     /locus_tag="VE783_09885"
     CDS             1715..2509
                     /locus_tag="VE783_09885"
                     /inference="COORDINATES: protein motif:HMM:NF020893.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VTT domain-containing protein"
                     /protein_id="HYX53749.1"
                     /translation="MKELLQLLTRHPYIVLLFSALLERIGLPLFLSPVLVGAGALAAA
                     GQMRFDAGFWLALVACILGDQIWFAMGRNRGDSVLSLMCRISFEPDTCVRRSKVFMEK
                     GAMRTVFFSKWLPGVSHIVPAVAGLSRVRKTDFLMANLAGTAMFVFSLMLAGYLPVEH
                     LHVVPRAGAIVFEGAFVLLIANVGFKYMQRRKFLQELYKSRITPEDLQQMLEAGEKVV
                     IVDLRHPLDSISDPRVLPGALRMLPEQIEEKASILPGNEEVVLYCT"
     gene            2856..5516
                     /locus_tag="VE783_09890"
     CDS             2856..5516
                     /locus_tag="VE783_09890"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain S-box protein"
                     /protein_id="HYX53750.1"
                     /translation="MVSPHSKWLSRISLLAGSSTTILAVAVLVGWHIGYLPLIQVLPA
                     VAAPMQRLTAFSFLISGLSLILLTTGRRRWAATLQLLVFTIAILVISEYLFRIDIGID
                     LLLGPAYITTHTSNAGRPSPVTALCFAMMSAALLLMRNDALARRTPAVRGIVGSVIAV
                     VGAVSFLGYLGGHSEAYGWSHFSRVAAHTGIGFALLGLGVVTLAWQEHCEPGLPQWIP
                     VSVTLAVAAGVLGLWQALIPHTDAHYSHLSSGVLIGGFTVAMLLGVTIYLAQQAWERN
                     RDLLIYRMAFENSFDGLLLTRLDGSIQKANPSACAIFGRSEEEICHAGRRGLMDTTDP
                     RLQQILEDRKRHGVAYGEVNCRRKDGSLFPIEVSSVVFEDASGEPRTTLALRDISERK
                     RAEQQLREQAILLHRAHDAIIVRDLQAHAVFWNRGAETTYGFAAPEALGKITHELLKT
                     RFPVPLKEIENIVTATGEWDGELVHATREGGELVVASRWSLLRDESGNPRNILEINRD
                     ITSRKKAEAELKVQTERLSLATHVASIGVWEWDVNTNQSVWDDTCYEIYGVPKDAPMA
                     YDRWAQLVYPDDFAKVEASLQRAIRMKSQDYVEFRIVRPDGRLRHVSSAQGVVLDEQG
                     NVSKMVGINIDVTERQHMQAQLEASARLSALGMMAGGVAHEINNPLTIIHASASDLLE
                     LAQDRPVLASEEVIRSSRRIRQTAERIAKIVKSLRRISREGANDQLFPAQVGKIVEET
                     LEICREKFRIHSVQLLVPDIDPALTLPCREVQIAQVLLNLLQNAYDAVVELPGEKWVR
                     LEVTVQESSLLLSVIDSGPGVPETLKTKIMDPFFTTKEVGKGTGLGLTLSRTIVEEHG
                     GTLELSEQAGHTCFRLSLPMSVPRSHYAVG"
     gene            5503..6261
                     /locus_tag="VE783_09895"
     CDS             5503..6261
                     /locus_tag="VE783_09895"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HYX53751.1"
                     /translation="MQLADAAILVVEDEVTLCEIMTAWLRRSARLVLSAHNGQEAFHL
                     LQQEKIDVVISDVRMPIMDGVALLRAIRNLPPPHPAVIFITGFSDLEPRDAYGLGIEA
                     ILEKPLERDQLLKAVQRSLSSRAEIWSKPTDAIPAFPLTLTFASREQAVREKQIAFGH
                     GGFCVSTDRSVPEGPVALRVSFRDDGMVCSGRGEVRWTAPAESLIGIELTYVDDHCRE
                     WAAEQAELHKLECFIPNSPEPESSRATVAAAAKT"
     gene            6489..7010
                     /gene="nrfH"
                     /locus_tag="VE783_09900"
     CDS             6489..7010
                     /gene="nrfH"
                     /locus_tag="VE783_09900"
                     /EC_number="1.7.2.2"
                     /inference="COORDINATES: protein motif:HMM:NF015237.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0022900 - electron transport chain
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c nitrite reductase small subunit"
                     /protein_id="HYX53752.1"
                     /translation="MTRIGLVLALLIGLAIGIGGYAFIYAKGYSYLLNDPSACANCHV
                     MNDQYAGWVKSSHHSAATCNDCHTPHNLIGKYAVKASNGFFHSFYFTTGRYPDTIEIT
                     KFDRQVVEAACRHCHEAITQAIDSNSVHGGAQGVECTRCHISVGHSESAASLLEQHHK
                     DFTQPINFRSNHE"
     gene            7003..8457
                     /locus_tag="VE783_09905"
     CDS             7003..8457
                     /locus_tag="VE783_09905"
                     /inference="COORDINATES: protein motif:HMM:NF014398.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA];
                     GO_function: GO:0042279 - nitrite reductase (cytochrome,
                     ammonia-forming) activity [Evidence IEA];
                     GO_process: GO:0006807 - nitrogen compound metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ammonia-forming cytochrome c nitrite reductase
                     subunit c552"
                     /protein_id="HYX53753.1"
                     /translation="MSNGTETGGRSRRFLVAVVVLAAISVFAVTALLINIFERKQEAR
                     NPFYRVVELNDTVADPAIWGKDFPMQYDLYLRTIDEVRTKYGGSEALPRTPTDADPRS
                     VVARSKLEEDPRLKTMWAGYSFSKDYRERRGHAYMLQDQTFTERQQANPPGACLNCHA
                     SMVTVYNQLGQGDMMKGFAAVNHMKYMDARKLAQHPVACIDCHDPQTMQLRVTRPAFM
                     EGIKALKASQGIQNYDVNKMATRQEMRSFVCGQCHVTYYFKGPDKTLTYPWDKGLHIE
                     DIMASEDAAKVKEWDHAETGAPMIKPRHPEFEVWNMGVHARSGVACADCHMPYMREGG
                     LKISDHQVNSPLLKINRSCQTCHHFPEEELKARAEEIQDRYFNLRNTALDSLMDLIGD
                     IKASKDKVTPDQLTKARDYQRHCGFMIDFIASENSMGFHAPQEAQRILGDAINQCRLG
                     QLVLHGGPEPSHNPEMIKEVKVPAAVIGGGGKSQ"
BASE COUNT         1968 a         2877 c         2665 g         2043 t
ORIGIN      
        1 cgcacaccag cagcgtgttg cgtccagcaa gcgacgcagt tgccgcgcaa aaatcagcat
       61 tgccgaagca gccgaactcc agcttgtcca caacccttac atccggcatg agcgaggcga
      121 tctccggaac tgtttcgccc agtcccttcc tgtactgcgc gctggcaacg attgggatat
      181 cgagcagcag ggccaggcgg atcaggagct gcgagttgcg cacgacgcgc tctttttccc
      241 agatcgccgg cagcagcttc tcctggacat cgatgacgga cagcacgcaa tcttccgcgc
      301 gcagcaggcg gcgggcagct tcagttcggc tgagcggttc agcgctgatg gtggacatgc
      361 gctctatttt aagcctccag tggttgtaat cagctcctgg tttggggctg ctggcctgat
      421 cagattcccg gttttgctga ttgctgaata ctaattgcta actgcttctt tcaaaagtgc
      481 tcatcctgca tggcgacctt ctcctgtgcg gagaggctct gcctctgctg ccacgctgtg
      541 gtttgccagt tgtctttggg ggtgccttcg cgcttcagcc agggaggcag ttccagccgc
      601 aaatgccggg ccagagagat cgcgtacggc tcataaagtg cgcggatgcg cttcagttcg
      661 gcatcggccg catcgccgtc caataatctc actcctgcgc tgctgaggtg gtggcgcatg
      721 tagctcagat cttccggaga gagcctttgc cgagacgcct gcaggtccgg cgcagcggaa
      781 aacacctggc tcagatcaac cagggcatgg cgggaaatgg cgaacgtcat tcgcgcctgg
      841 tactggcaca tgccttccag tccgaccatt gccagcgcac agacgtcaag caccgcggtc
      901 agggaagcga tccacgactg gttgtcatgc tgtgagcgga agtacgccaa cacgggatag
      961 gaaaggtgcg tctccatgag atcggcggag agcttctccc attcccgcag aacatcggtg
     1021 agtgcgtcaa agcgcatgtc atcgccggca ttgcggcgca acatctcaaa tgcggttgga
     1081 ggagaaccgg cgcgcgcgtc gagcagggag atggtgactt cacgccgcga aaacgattga
     1141 taaagcaccg gcaagtatcc gatgacgaga gcgaggaagc cgaacccgat tcctgcttcc
     1201 agcacggtga gaaatctcgc gagcggtgaa gccggcgtaa cgtcgcccag gccaagcgtg
     1261 aaaagcgttg tcccgctaag gtagagtgcg ttgccaaagc ggttgggata aagctcacct
     1321 cgaaattctg atcctgctcc gtagtggatc atggcaaaac ccagcagcaa tgtgaatgcc
     1381 caaaaggcca gcagaaacag cagcgaaagc ggtccgtaat agctgagcat cacgtcctgc
     1441 ttctttttgc tggagcgcat gccggcgagg ctccgccacg gtttccaggt ggactgatag
     1501 aagtagcgcg tcagccgaaa ctgccgtgtc acgcggcgcg ggagcacaat ggtttcaaat
     1561 gtctcccaga gcaccgtgaa gaccagaatg gcgccgaaaa tcattgaaag cagatggaac
     1621 aagcactctc cttatcgcgc tgttagattc ctgaaaaggc aatgggttct gaaaattctg
     1681 ctctggggta aactggagca gggaaccgcc gccggtgaaa gaactcctcc aacttcttac
     1741 cagacatccg tatatcgtgc tgctgttttc tgcgctgctg gagcgcattg gactgcccct
     1801 gtttctttcg ccggtgctgg ttggcgccgg agcactggca gccgccgggc agatgcgctt
     1861 tgacgccggc ttctggctgg cgctggtagc ttgcatcctt ggcgaccaaa tctggtttgc
     1921 catgggccgc aaccggggcg actcggtgct gtcgttgatg tgccgcatct cgtttgagcc
     1981 ggacacctgc gtgcgccgct ccaaggtctt tatggaaaag ggggccatgc gcacggtctt
     2041 cttctccaag tggctgcctg gggtctcgca tatcgtacct gctgtagccg gcctgagccg
     2101 ggtccgtaag accgattttt tgatggccaa cctggcggga acggcgatgt tcgttttcag
     2161 cctgatgctg gccggatatc tcccggtaga acacctgcac gtggtgccaa gagccggcgc
     2221 aatcgtgttt gaaggcgcgt ttgttttgct gatcgcaaac gtgggcttca aatacatgca
     2281 gcggcgtaag ttcctccagg agctttataa gtcgcgcatt acgcctgagg acctgcaaca
     2341 gatgctcgag gccggggaaa aggtggtgat tgtagacctc cgccatccgc ttgactccat
     2401 ctctgatcct cgcgtccttc cgggagcgct ccgcatgttg ccggaacaga tagaagagaa
     2461 agcttccatt ctgcccggca acgaagaggt tgttctgtac tgtacttgac ccaatgaagc
     2521 cacaagtgcc cgggtggcac agaagctgca aaagctgggg atcaaacggg ttcgcccgct
     2581 aaaaggcggc tttcaggagt ggaaggacct cggctttccg cttgaggatt ccgctgagat
     2641 tgcttggcgc agcggtcgag caataagctc gtaagctctt ccgaatcacc tccttacact
     2701 taacccgttc gggttaatca gaagtgacaa acgtcacatc atttgtgtgc caccctccac
     2761 atactgccaa caagggagcg accgcctgcc agtaaggtgg aggtggcggc ctatccgcct
     2821 taagagagcg gcaacttaat agattcacag gacttatggt gtcaccccat tcaaaatggc
     2881 taagccgcat ctctctcctt gcgggatcgt ctaccacgat actggcggtg gctgtcttgg
     2941 tgggctggca cattggctat ctgccgctga tccaggttct tcccgcggtt gccgcgccta
     3001 tgcagcgcct gaccgcgttc agctttctaa tcagcggtct ctcgctcata cttcttacaa
     3061 ccggtcgtcg ccgatgggca gctactttgc agctgttagt cttcaccatt gccattcttg
     3121 taatctccga atatctgttt cgaatcgaca ttggaattga cctgttactc gggcccgctt
     3181 acatcaccac gcatacctca aatgccgggc ggccctcccc ggtcacggcg ctttgcttcg
     3241 cgatgatgag cgccgccttg ctgttgatgc ggaatgacgc actcgcacgg cgtacaccgg
     3301 cagtgcgagg cattgtgggt tcggtcatcg cggtcgtggg tgccgtgagc ttcctcgggt
     3361 accttggggg acattcggaa gcctacggct ggagccattt ctcccgtgtg gctgcccata
     3421 ccggcatcgg ctttgccttg ttgggacttg gcgtggtcac gctggcttgg caggagcact
     3481 gcgagccagg cttgccgcaa tggattcctg tgagcgtcac gctcgccgta gctgccggcg
     3541 tgctggggct ttggcaggcg ctgattcctc atactgacgc gcattactcc catctctctt
     3601 ccggcgtact catcggtggc ttcactgtgg cgatgctgct gggagttacc atctaccttg
     3661 cccagcaggc ctgggagcgc aaccgcgatc tgctgatcta ccgcatggcc tttgaaaaca
     3721 gctttgacgg gttgttgctc acccgactgg acggctccat tcagaaggcc aatcccagcg
     3781 catgtgcaat cttcggtcgt agcgaagaag aaatctgcca cgccggacgg cgcgggctca
     3841 tggataccac cgatccgcgc ttgcagcaga tccttgaaga ccggaaacgt catggagtcg
     3901 cctacggtga ggtcaattgc cgtcgcaaag atggaagctt gttccccata gaagtttcct
     3961 ccgtcgtttt tgaagacgcc agcggtgagc cgcgtaccac gcttgccttg cgcgacataa
     4021 gtgaacgcaa gcgcgccgag cagcagctca gagagcaggc cattctgctg caccgcgccc
     4081 atgacgcgat tatcgtgcgt gacctgcagg cccacgcagt cttctggaac agaggcgccg
     4141 agaccaccta cggattcgcg gcacccgagg cattgggcaa aataacccat gagctgctca
     4201 agacccgctt tcccgtgccc ctcaaggaaa tcgagaatat tgtcaccgca actggtgagt
     4261 gggacggtga acttgtgcat gcaacgcggg agggcggaga actggtagtc gccagccgct
     4321 ggtctttgct gcgcgacgaa tccggtaacc cgcggaacat tcttgagatc aatcgtgaca
     4381 tcacttcgcg taaaaaagca gaagcggagc ttaaggtcca aaccgagcgg ctttccctgg
     4441 ccacccatgt tgcgtccatc ggcgtttggg aatgggacgt aaacaccaac cagagcgtgt
     4501 gggacgatac atgttacgaa atctatggcg tgcccaaaga cgctcccatg gcatacgaca
     4561 gatgggcgca gctggtttat cccgatgact ttgcgaaagt tgaagcttcg ctgcagcgtg
     4621 ccatcagaat gaagtcgcag gattatgtcg aatttcgcat tgtccggcca gatggaaggc
     4681 ttcggcatgt ctcttccgcg cagggcgtgg ttcttgacga gcagggaaat gtttcgaaga
     4741 tggttggcat caatatcgat gtcaccgagc gccagcacat gcaggcgcag cttgaggcct
     4801 ccgcaaggct cagcgctctc ggcatgatgg ctggcggggt ggcccatgag atcaacaatc
     4861 cactcacaat catccatgcc tccgccagcg atctcttgga actcgcgcag gaccggccgg
     4921 ttcttgcgag tgaagaggtc atccgcagtt cccggcgtat ccgccagacg gcagagcgga
     4981 tcgcgaaaat cgtaaagagc ctgcgccgca tatcgcgtga aggcgccaac gaccaactct
     5041 ttccggcgca ggtgggcaag attgttgaag aaacgctgga gatatgccgg gaaaagtttc
     5101 gtatccattc ggttcagctg ctggtgccgg atatcgaccc cgcactcacg cttccttgcc
     5161 gcgaggtgca gattgctcag gtgttgctga acctgctcca gaacgcctat gacgcagtag
     5221 tcgaactccc gggcgagaag tgggtgcggc tggaggtgac tgttcaggag agcagtttgc
     5281 tgctttccgt gattgacagc ggacccggcg tccccgaaac attgaaaacc aaaatcatgg
     5341 acccgttctt taccaccaag gaggtaggca agggcacagg ccttgggctc accctttcca
     5401 ggaccattgt ggaagaacac gggggcacgc ttgaactttc tgaacaggca ggtcacacct
     5461 gtttccggtt gagccttcct atgtctgttc ccaggagtca ttatgcagtt ggctgatgca
     5521 gcaattcttg tcgtggaaga tgaagttacg ctttgcgaga tcatgactgc atggctgcgc
     5581 cgttccgcgc ggctcgtgct cagcgcacac aacgggcagg aggccttcca cctgctgcag
     5641 caggaaaaaa ttgacgtcgt tatttctgac gttcgcatgc ccatcatgga tggcgttgct
     5701 cttctgcgcg cgatcaggaa cttgccgccg ccgcatcctg cggtaatctt cataaccggc
     5761 ttcagcgatc tggaaccgcg cgatgcgtac ggactcggca ttgaggcgat cctggaaaag
     5821 ccgctcgagc gcgaccagct tttgaaagct gtccagagga gcctcagctc gcgggcggaa
     5881 atctggagca agccgacaga cgcgatacct gcgtttcctc ttacgcttac gtttgcaagc
     5941 cgtgagcaag ctgtgcggga aaagcaaatc gcattcgggc acggcggttt ctgcgtctct
     6001 acggatcgga gcgtccctga aggtcctgtc gcactgcgcg ttagtttccg tgatgacggc
     6061 atggtgtgct ccggccgtgg cgaggtgcgc tggactgctc cggccgaaag tttgatcggc
     6121 atcgaactca catacgtcga cgaccactgc cgtgagtggg cggccgagca ggccgagtta
     6181 cacaagctgg aatgtttcat tcccaactcg ccggagcctg agagttctcg cgcaaccgtt
     6241 gccgccgccg cgaaaacata gagcccactc tgcgcccatt ccgtactgaa ttccggaatt
     6301 gctgaactcg ccatgcttgg cctcatcgtc tggtgcatcc atcacgaaat gttttatgct
     6361 ttgtgacttg agtcacatcg cctgtgctct gagcatctta ggttgttcgt ttgcgggtgc
     6421 tcagctccgc cattactgaa gctgaggtag ccgcagcgcg atcggttccg aatgaggcaa
     6481 tcctgcacat gactcgaatc ggcctggttc ttgcccttct catcggtctt gccatcggca
     6541 tcgggggata cgccttcatt tatgccaagg gctactccta tctcctcaac gatcccagcg
     6601 cctgcgccaa ctgccacgta atgaacgatc agtacgccgg atgggtgaaa tccagccatc
     6661 attccgccgc cacctgtaac gattgccata ctcctcataa cctgatcggg aagtacgccg
     6721 tcaaggccag caacggcttc ttccattcct tctacttcac caccggccgc tacccggaca
     6781 cgatcgagat cacaaagttc gaccgccagg tggttgaggc tgcctgccgc cattgccatg
     6841 aagccatcac gcaggccatt gacagcaact ccgtccacgg cggggcacag ggcgtcgagt
     6901 gcacgcgctg ccacatttcc gtgggccatt ccgaatcggc cgcgtctttg cttgagcaac
     6961 accacaaaga tttcacgcag ccaataaatt tccggagcaa tcatgagtaa cggtactgaa
     7021 acaggcggac gctcccgccg cttcctcgtt gcagttgttg tcctcgccgc aatttcggtc
     7081 ttcgcggtca cggctctgct catcaatatc tttgagcgca agcaggaagc gcggaacccc
     7141 ttttaccgcg tcgtcgaact caatgacacc gtggccgacc cggcaatctg gggaaaagat
     7201 ttccccatgc agtacgacct ctacctccgc accattgacg aggttcgcac caagtacggc
     7261 ggcagcgaag ccttgccgcg cacgcccacc gatgcagatc cgcgttcggt cgtcgcccgt
     7321 tccaagctgg aagaagatcc tcgcctcaag accatgtggg ccggctactc cttctccaag
     7381 gactatcgcg agcgccgcgg ccacgcctac atgcttcagg accagacgtt caccgaacgc
     7441 cagcaggcca acccgcccgg cgcatgcctg aactgccatg cctccatggt cacggtttat
     7501 aaccagctcg gccagggcga catgatgaag ggcttcgccg ccgtcaacca catgaagtac
     7561 atggatgcgc gcaagctcgc ccagcatccc gtcgcctgca ttgattgcca cgacccgcag
     7621 accatgcagc ttcgcgtcac ccggccggcg ttcatggagg gcatcaaggc gctcaaggct
     7681 tcgcagggca tccagaatta cgacgtcaac aagatggcca cgcgccagga gatgcgctcc
     7741 ttcgtctgcg gccagtgcca cgtcacctat tacttcaagg gccccgacaa gacgctcacc
     7801 tacccctggg acaaaggcct ccacatagaa gacatcatgg ccagtgaaga tgcggccaaa
     7861 gtcaaggaat gggaccacgc cgaaaccggc gcgcccatga tcaagcctcg tcaccctgag
     7921 tttgaagtct ggaacatggg cgtgcacgcg cgctcaggcg ttgcctgcgc agattgccac
     7981 atgccctaca tgcgtgaagg cggcctcaaa atcagtgacc atcaggtcaa cagtccgctg
     8041 ctcaagatca accgctcctg ccagacctgc caccatttcc ctgaagaaga gctgaaggcg
     8101 cgggccgaag aaattcagga ccgctacttc aacctccgca acaccgcgct ggattcgctc
     8161 atggacctga tcggcgacat caaggccagc aaggacaaag tcacccctga ccagctcacc
     8221 aaagcccgcg actaccagcg ccactgcggc ttcatgattg acttcatcgc gtcagagaac
     8281 tccatgggct tccacgcgcc acaggaagcg cagcgcatcc tcggcgacgc catcaaccag
     8341 tgccgcctcg gccagctcgt gcttcacggc ggccccgaac ccagccacaa cccggaaatg
     8401 atcaaggaag tgaaggtgcc ggccgcagtg atcggaggag gagggaagag ccagtaggta
     8461 agccaacgcg ttctgatcag tgtcttcagt gtccatctgt ggctaaattg cctttgtctt
     8521 tccgatcacc cgatcaccgg atcacccgat cctcagcgct ctctgtgtac tcagtggtaa
     8581 cggtttttga gtacccgggg gtacccccca cccctccccg aaaacaaagg acttagctcg
     8641 gagcatcccg ggaagctccc cgggcggcct ccccgaaaat ccgggaagct ccgtccactc
     8701 tcacgccccg ccgatacact ctcggtttac caagttgcca atactcacgg cagtccgacc
     8761 aaaggctaat ggccaagtgc caatggctgg ctggccaatt gctatttact ccctattcag
     8821 ttgtcaaata tcgttaccgc tctcgcggcg cctcctggga agcttctctt ccgagcccct
     8881 ggttctgatc tgtgtcctca gtgttcgtct gtggctaaat ccttattcgc gcgtcttttc
     8941 gcgttaattc gcggctcgcg gctcaagctt ctaattggtg tgttcccatc agcgttcatc
     9001 tgcgctcatc tgtggcaact gtttttttgc cgttcatccc aattcgtccc ggcctcgtcc
     9061 cggttgatcc cggggtcgtc ccaccgggat atcccggtgg atcccgaccc tgtcccaacc
     9121 ccagggcccc cgacaagccc gttttttggc ttgttggggt ggaagcggtc ccaatgcctt
     9181 tctgtgcggc taattaccat ttgctaattg ctaattgctc gattgcaaat cagcctaact
     9241 tacaacgatt ctgctgcccg aaacaacagc gaaatggttc aatgccgccg tgggcgaagg
     9301 tactacgcaa gctattacac cgtccaaaac tcctacagac cccaatttcc acccgcgttc
     9361 atccgcgcca atccgcggta agtccctggt ttgccgatca caggggcccc cggcaagccc
     9421 gacttttggc ttgctggggt gtaggtcacc cgatcacgcg cgatcacccg atctcccgat
     9481 cacccgatct ccttctctgt gctcgtccgt gttcatctgg ggctaattgg ttttaaagat
     9541 cagccgcggc ccc
//
LOCUS       DASQYP010000305         6784 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_189118, whole genome shotgun sequence.
ACCESSION   DASQYP010000305 DASQYP010000000
VERSION     DASQYP010000305.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 6784)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6784)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6784
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_189118"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..750
                     /locus_tag="VE783_09910"
     CDS             <1..750
                     /locus_tag="VE783_09910"
                     /inference="COORDINATES: protein motif:HMM:NF020133.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53754.1"
                     /translation="KIRITIEKSLPVQGGLGAASSNAVATLFALEKLLKRSLPPEERL
                     RIASEVGSDLPLFLLGGTVLGTGRGEQVYPLQDLPAFPCVIATPEVGVSTPTAFADWD
                     KRLSDSGALTARNGSDKMGVFSQSVYEWLAGSLGTPTGVPGGWDRAEALLLDLVRTGI
                     ENDFETVVFPKYPAIREVKRAFERSGARYVSLSGSGSTVFALFSDNEAAQRAAAALNE
                     ADIPAVATSTLTREEYWKQMFPAKVAKTGTW"
     gene            1102..1175
                     /locus_tag="VE783_09915"
     tRNA            1102..1175
                     /locus_tag="VE783_09915"
                     /product="tRNA-Gln"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1134..1136,aa:Gln,seq:ttg)
     gene            1296..2321
                     /locus_tag="VE783_09920"
     CDS             1296..2321
                     /locus_tag="VE783_09920"
                     /EC_number="2.7.6.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008433114.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0004749 - ribose phosphate diphosphokinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016301 - kinase activity [Evidence IEA];
                     GO_process: GO:0006015 - 5-phosphoribose 1-diphosphate
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0009156 - ribonucleoside monophosphate
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0009165 - nucleotide biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribose-phosphate pyrophosphokinase"
                     /protein_id="HYX53755.1"
                     /translation="MATIATASEKPKQQPTQPKSEHKTQRAHRDDKFKIFCGTANEAL
                     TDEICAFLGIERGKATVTRFSDGEVYIQVLENVRGADVFVVQPTCFPVDEHLMELLLL
                     IDALKRASARRITTVIPYYGYARQDRKDKPRVPVSSKVIADLLTTAGAHRALVVDLHA
                     PQIAGFFNIPVDHIFASPVLVDHFKKMQLPNLTVVSPDAGGVERARFFAKKIDAALAI
                     VDKRRTDMNVAEVMHVIGDVKGRTCLIIDDIIDTAGTLVKTAEALVNAGASKVYACAS
                     HPVLSGPAIERISKSKLEEVVVTNTIPLTGAGKSEPKIKVLSIAGLLGRTIQSIHEET
                     SVSSLFA"
     gene            2354..3040
                     /locus_tag="VE783_09925"
     CDS             2354..3040
                     /locus_tag="VE783_09925"
                     /inference="COORDINATES: protein motif:HMM:TIGR00731.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_function: GO:0008097 - 5S rRNA binding [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA];
                     GO_process: GO:0006950 - response to stress [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L25"
                     /protein_id="HYX53756.1"
                     /translation="MISQELVEAQARPDESRGKNEARRLRAQGRIPAVLYGARKDAVA
                     VSLDPKQIQRILHSESGHNTIFDLKVGGESTKAMVVDWQHDPIKGHLLHIDLKRIAMD
                     QKIRVSVPIHLVGEAPGVKTQGGIMDQVVREVEIECLPGDIPSHIDADVSKMEFGHVL
                     RVSDLPHDGKIKFITDEQQALAHVTAVKEEVVATPEAAAEAAAAAPAEPEVIKKGKQE
                     TEEEAEPAKK"
     gene            3046..3645
                     /gene="pth"
                     /locus_tag="VE783_09930"
     CDS             3046..3645
                     /gene="pth"
                     /locus_tag="VE783_09930"
                     /EC_number="3.1.1.29"
                     /inference="COORDINATES: protein motif:HMM:NF013368.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004045 - aminoacyl-tRNA hydrolase
                     activity [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminoacyl-tRNA hydrolase"
                     /protein_id="HYX53757.1"
                     /translation="MKLIVGLGNPGIEYQFTPHNIGFLAVDRIAEQCGVLVDNRHCKA
                     LTGRGRIGNEEILLAKPETYMNLSGMSVLELVRKYESVDPQMDLIVIYDELDLPLGMI
                     RIRPLGSSAGHNGMQSIINALQTEEVQRIRIGVAPDDPKKGGAKYILAPFRKSQLVAV
                     DEALDLAAKAVETIIAEGISVAMNRFNRKNKAEEPAEGS"
     gene            3815..4213
                     /gene="rpsF"
                     /locus_tag="VE783_09935"
     CDS             3815..4213
                     /gene="rpsF"
                     /locus_tag="VE783_09935"
                     /inference="COORDINATES: protein motif:HMM:TIGR00166.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S6"
                     /protein_id="HYX53758.1"
                     /translation="MERAYEVMFIVRPDLLEEDVDKLISTLQGHATNAGAIVKNVEKM
                     GKRRLAYDVKKFSDGQYVLFTLNANGAAIHELERRMRVSEPVIKFITVRTDEEQQRLE
                     KVRKIRASRVKRPPAEAAVATEGEGAPATA"
     gene            4391..4606
                     /gene="rpsR"
                     /locus_tag="VE783_09940"
                     /pseudo
     CDS             4391..4606
                     /gene="rpsR"
                     /locus_tag="VE783_09940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007403456.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S18"
     gene            4634..5098
                     /gene="rplI"
                     /locus_tag="VE783_09945"
     CDS             4634..5098
                     /gene="rplI"
                     /locus_tag="VE783_09945"
                     /inference="COORDINATES: protein motif:HMM:TIGR00158.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000311 - plastid large ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L9"
                     /protein_id="HYX53759.1"
                     /translation="MEVILKEDVPKLGHRGDVVKVAEGYGRNFLLPRKLAIEATQANK
                     AVIEQMKASAVRRSAVEKADAEALVKQLEAVSLSFERKAGEKDHLFGSVTSADIADAL
                     NAKGFNIDRRKIQLDDPLKSIGSFDVPVRLHRDVVAKVKVAVNKEGGEAAQA"
     gene            complement(5161..6084)
                     /locus_tag="VE783_09950"
     CDS             complement(5161..6084)
                     /locus_tag="VE783_09950"
                     /inference="COORDINATES: protein motif:HMM:NF013292.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isoaspartyl peptidase/L-asparaginase"
                     /protein_id="HYX53760.1"
                     /translation="MRQLPVLVVHGGAWAMPDDVVDAHIRGVRAALDDAWRVLESGGR
                     ALDAVQAAIIAMEEDDTFDAGRGSFLTRDGRVQLDALMMDGANLRAGGVGCVERIRNP
                     IKAARLVLDDSPHIYMVAEGAEQFAQEHGLKLCDNSELVIDREVMRLKDFQARSAAGE
                     PDTTFAGNGLDKGHDTVGAVALDADGNIAAGTSTGGTLNKAPGRVGDSSLIGCGCYAD
                     NLSAAVSCTGWGEPIMKLVLAKWAADRVQGGGAPDAVAQEAMFYLKNRLEGHGGMILL
                     DQRGRFGIAHNTPRMAWAYRSTLGERAGVNC"
     gene            6342..>6784
                     /locus_tag="VE783_09955"
     CDS             6342..>6784
                     /locus_tag="VE783_09955"
                     /inference="COORDINATES: protein motif:HMM:NF016101.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016788 - hydrolase activity, acting on
                     ester bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alkaline phosphatase family protein"
                     /protein_id="HYX53761.1"
                     /translation="MQSRRKPLELAILMALFLLSAMLLTGCQGLNGSTPAPTPTPTPT
                     PTPGPQASMNSINHIVLFMQENRSFDHYFGQLNVYRAANGLPQDVDTWTSTSDKTPTN
                     VSTVGFDPANSGFGPPIHAFHMQSQCSENLSPSWNETHVMWNLHNG"
BASE COUNT         1514 a         1843 c         2082 g         1345 t
ORIGIN      
        1 aagatccgca tcaccattga gaagagcctg ccggtgcagg gcgggctggg agcagcgtca
       61 tccaatgccg tggctactct gttcgcgctg gaaaaactgc tgaagcgatc cttgccgccg
      121 gaggagagac ttcggattgc ctcagaagta ggctctgatc tgccgctttt cctgctaggc
      181 ggcacggttt tgggtacagg ccgcggggaa caagtctatc ccttgcagga ccttcccgct
      241 ttcccatgtg tgatcgccac gcctgaagtg ggggtgtcga cgccaactgc ttttgccgac
      301 tgggacaagc gattgtctga ctccggcgca ttgaccgccc ggaacggctc cgataaaatg
      361 ggtgtgttca gccagtctgt ttatgagtgg ctggcaggaa gtttaggtac cccaaccggt
      421 gtcccaggag gctgggaccg ggccgaggca ctgcttctcg accttgtccg taccgggatt
      481 gaaaacgact ttgaaacggt tgtttttcct aagtatcccg caatacgtga ggtgaagcgc
      541 gcttttgagc gcagcggagc caggtatgtt tcgctctccg gttcgggctc aacggttttt
      601 gctcttttca gtgataatga ggcggcacag agggccgcag cagcgctgaa cgaagcggat
      661 attcctgctg tggcaacctc aactttgacg cgcgaggaat actggaagca gatgttcccg
      721 gcgaaggtgg cgaaaaccgg tacttggtag tgggtatttg gtacttggta aaccttggcg
      781 aattgcgcgc ttgattttgt gccagaagta tcagttttcc actccggggt gcttcgagct
      841 aagtgctttg ttttcggggt ggatggggta ctccccccgg agataacgaa atagttatcg
      901 ccgggatcac gtgggatcgc cggaatcgcg cgtgatcgcc gacatcgccg tgatcggaaa
      961 gactgatggt cggcagtgag caagtttttg ggcggtcgac taatggtagg tcaagtgcct
     1021 ttccacccca tcacgcgaaa agcgcgcgtg acggggatcc cggccgcaac ggtttcgctc
     1081 ggcaacgagc aggtaagttt ttgggcggtc gactaatggt aggtcaagtg cctttggagc
     1141 actttgtcta ggttcgaatc ctagccgccc agccaggttt agagtttgca gtttatccgc
     1201 gggttccgga gcgattggct caactcagca tcgctcatgc aaaggaccca aaacgtcaat
     1261 ccgttgtagc caaccagctt cgaacgggtg atcacatggc aacgatagcg actgcgtctg
     1321 aaaaaccgaa gcaacagcca actcagccga agagcgagca caagacccaa cgcgcgcaca
     1381 gggacgacaa attcaagatt ttttgcggta ccgccaatga ggcgctcacc gacgagattt
     1441 gtgcatttct gggaattgaa cgcggcaagg ccacggtaac caggttctct gatggggaag
     1501 tttatatcca ggtcctggag aacgtgcgtg gagcagatgt gtttgtggtg cagcccacct
     1561 gctttccggt ggacgagcac ctgatggagt tgcttttgct gattgacgcg ctgaagcgcg
     1621 cgtcggcacg gcgcatcacc acggtgatcc cgtattacgg gtatgcgcgg caggaccgga
     1681 aagacaagcc gcgtgtgcca gtatcgtcaa aggtgattgc ggacctgctt acgaccgcgg
     1741 gtgcgcatcg ggcgttggtg gtggatttac acgcgccgca gatagccggg ttcttcaata
     1801 ttccggtgga ccacattttt gcttcgccgg tgctggtgga ccacttcaag aagatgcagt
     1861 tgccgaacct gaccgtggtc tcgcctgatg caggcggtgt ggagcgcgcg cgcttctttg
     1921 ccaagaagat tgatgcagcg ctggccattg tggataagcg gcgcacggac atgaacgtgg
     1981 ccgaggtgat gcatgtgatc ggcgatgtaa aaggccgcac gtgcctgatc atcgacgaca
     2041 tcattgatac ggcaggcacg ctggtaaaga ccgcggaagc gctagtgaat gcaggagcgt
     2101 caaaggttta cgcctgtgcg tcgcatccag tgctctccgg tccggcgatt gagcgtattt
     2161 caaagtcgaa gctggaagag gtggtggtga cgaacaccat tccgctcact ggggccggta
     2221 agtccgagcc caagataaaa gttctgtcga tcgccggcct gctgggccga acgatccagt
     2281 caattcacga agagacttcc gtcagttcgc tgtttgctta aggcggcggg aagcgagaga
     2341 aggaaacgaa gagatgattt cacaggaatt ggttgaagct caggcaaggc cggacgagtc
     2401 gcgcggcaag aacgaagcgc gccggctgcg cgcacagggt cgcattcccg cggtgctcta
     2461 tggcgcgcgg aaagacgcgg tggcagtaag cctggatccc aagcagatcc agcgcattct
     2521 gcactctgag tccggccaca acactatttt cgacctgaag gtcggcggcg agagcaccaa
     2581 agctatggtg gtggactggc agcacgatcc tatcaaggga cacctgctcc acattgatct
     2641 gaagcggatt gccatggacc agaagatccg cgtcagcgtg ccgattcacc tggttggcga
     2701 agcgcctggc gtgaaaacgc agggcggcat catggaccag gtggtgcgcg aagtggaaat
     2761 cgagtgcctt ccgggagaca tcccgagcca cattgatgct gatgtttcga agatggagtt
     2821 cgggcacgtg ctaagggtga gcgatctgcc gcatgacggc aagatcaagt tcatcaccga
     2881 cgagcagcag gcactggcgc acgtgacggc cgtgaaggaa gaagttgtgg ccactccgga
     2941 agctgcggcg gaagcggctg cggctgctcc tgcggagccg gaagtcatca agaagggcaa
     3001 gcaggagact gaggaagaag ccgagccggc gaagaagtag ggccggtgaa gctgatcgtc
     3061 ggactgggca atcccggaat cgaataccag ttcacgccac acaacatcgg ctttcttgcg
     3121 gtagaccgca ttgccgaaca gtgtggcgtg ctggtggata accggcactg caaggcgctt
     3181 acgggtcgcg gcaggattgg gaacgaggaa atcctgctgg ccaagccgga aacctacatg
     3241 aacctgagcg gcatgtcagt gctggagctg gtcaggaagt acgaatcggt ggatccacag
     3301 atggacctca tcgtgattta tgacgagttg gaccttccgc tggggatgat ccggattcgg
     3361 cctctgggtt cttcggcggg gcataacggg atgcagtcga tcatcaacgc gctgcagaca
     3421 gaagaagtcc agcggatcag gatcggcgta gcgccggacg atccgaagaa aggcggcgca
     3481 aagtacattt tggcgccgtt ccggaagtcg cagttggtcg cggtggatga agcgctggac
     3541 ctggctgcga aagccgtgga aacgattatc gctgagggaa tcagcgtggc tatgaatcgg
     3601 ttcaaccgca agaacaaggc ggaagagccg gccgaaggaa gttaggaaaa acggtagttg
     3661 gtaattggta cttagtattt ggttttgtgt ttccgaccaa gtaccgaata ccaattacca
     3721 agtacctgga aaagatttgc agaaattcag agtcgtttgt ccgcagtgga atcttgagcg
     3781 atcgaggttc gcggcaaatt gacaggagaa aataatggaa cgagcttacg aagtaatgtt
     3841 cattgtgcgt ccggacctgc tggaagagga cgtggacaag ctgatcagca cgctgcaagg
     3901 ccacgccacc aatgccggag ccatagtgaa gaacgtggaa aagatgggca agcgccgcct
     3961 ggcctatgac gtgaagaagt tctctgacgg ccaatatgtg ctgttcactc tgaacgcgaa
     4021 tggcgccgcc atccacgaac tggagcgccg catgcgcgtg agcgaaccgg tgatcaagtt
     4081 catcacggtg cgtacagatg aagagcagca gcgcctggag aaggtccgca agatccgtgc
     4141 ctcgcgcgtg aagcgtccgc cggctgaggc cgcggtggcc acggaaggtg aaggcgctcc
     4201 ggcgacggca tagttcggtc gcggagtaca caagatcatc cgcggcggaa tgcccggatt
     4261 gcaatattga aggagagtta tggctgacga gcaaaaccag gaagtttcca caccagcagc
     4321 gcggccttcg ggccgccctg acaggcctga ccgcggaccg ggaggccccg gcgcccgcga
     4381 tggcggccgc aagttcttcc gccgcaagaa ggtctgcaag ttctgcgtgg agaagattga
     4441 cgacattaat tacaaggacg tgcgcctgct ctcacagttt gtggcggagc gcggcaagat
     4501 cgtccctcgc cggttgacag gcgtgtgcac accgcaccag cggcagctta ccggcgcgat
     4561 caagcgggcg cgcaacatcg ccctgctgcc ctttgcggcg cggtaaccca aaatttgaat
     4621 ctggagatct gacatggaag tcatcctgaa agaagacgtg cccaagctgg gccaccgcgg
     4681 tgacgtggtg aaggtggccg aaggctatgg ccgcaatttc ctgcttccgc gcaagctcgc
     4741 cattgaagcc actcaggcga acaaggccgt gattgagcag atgaaggcct ctgctgtacg
     4801 ccgctctgcc gtggagaagg ccgatgcgga agctctggtg aagcagcttg aggccgtaag
     4861 cctgagcttt gaacgcaagg ctggcgagaa ggaccatctg ttcggctcgg tgacctcggc
     4921 ggacatcgct gacgcgctga acgcgaaggg ttttaacatt gatcgccgca agattcagct
     4981 cgacgatccg ctgaagagca ttggcagctt cgacgtgccg gtccgtctgc atcgtgacgt
     5041 ggtagcgaag gtgaaagtgg ctgtaaataa ggaaggcggc gaagccgcgc aggcgtaaac
     5101 gtatgtcgaa agaaaccaac taagccctga attccccgtt gaattcaggg catgctcttt
     5161 tcagcaattc actccggcac gctcgcccag ggtgcttcta taggcccagg ccatgcgcgg
     5221 ggtattgtgc gcgatgccga agcggccgcg ctggtcgagc agaatcatgc cgccgtgtcc
     5281 ttcaagccgg ttcttaagat agaacatggc ttcctgagcg acggcatccg gcgctccgcc
     5341 accttgcaca cgatcggcag cccacttcgc caggacgagt ttcatgatgg gctcacccca
     5401 tccggtgcac gagacggcgg cgctcaaatt gtcggcatag catccgcagc cgatcagaga
     5461 cgaatcaccc acgcgtcccg gtgccttgtt tagagtgccg ccggtggaag tgccggctgc
     5521 aatgttgccg tcggcatcca gcgctacagc gcctacggtg tcgtggcctt tgtccagacc
     5581 gtttcccgcg aatgtagtat ccggctcgcc tgccgcggag cgcgcctgaa aatccttcaa
     5641 gcgcatcact tcacggtcaa tcaccagctc cgagttgtcg caaagcttca ggccgtgttc
     5701 ctgcgcgaac tgctcggcgc cttccgcaac catatagatg tgcggactgt cgtcaagcac
     5761 cagccgcgca gctttgatcg gattgcggat gcgctccacg catcctacgc cgccggcgcg
     5821 cagattggcg ccgtccatca tcagagcgtc gagctggacg cgaccatctc gcgtgaggaa
     5881 gctgccgcgg cctgcatcga acgtgtcatc ctcttccata gcgatgatgg cagcctgcac
     5941 ggcatccagc gcgcggcccc cgctctcaag tacacgccag gcatcatcca aagctgctcg
     6001 aacaccgcgt atgtgtgcat ccacgacatc gtccggcatg gcccacgcgc cgccatgaac
     6061 caccagcaca ggcagttgtc tcactgatca atcctcacaa aagatggtga caggtgagtt
     6121 tatcaaacag ctcgcgcccc gcatcgtacc tgcaactctg gtcagagatt ctggcctgca
     6181 actctggcca gagtctcgcg ccagctactc tctctttcct tggtacagct aagtatctgt
     6241 aagtcgagtg tttttgagaa ctgctgccaa cagctcagga ggattgctca tcagaaaaaa
     6301 ccagagaaat cccttttgcg tgccagggag taaaagcaca catgcaaagc agacggaaac
     6361 cactcgagct agcgattctg atggcgctct ttttattgag cgcaatgttg ctgacgggct
     6421 gtcaggggct gaacggatcc actccagcgc ctacacccac acccacgccc actcctacgc
     6481 ctggaccgca ggccagcatg aattccatca accacattgt tctgttcatg caggagaaca
     6541 gatcattcga ccactacttc ggccagttga atgtctaccg agcggccaat ggactgcctc
     6601 aggatgtgga cacctggacc tcaacgtcgg acaaaacgcc gaccaatgtg tcgacggtgg
     6661 gattcgatcc agccaacagc gggttcgggc ctcctatcca cgctttccac atgcagagcc
     6721 agtgctcgga aaacctctcg ccatcgtgga atgaaaccca tgtgatgtgg aacctgcaca
     6781 acgg
//
LOCUS       DASQYP010000306         3281 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_159749, whole genome shotgun sequence.
ACCESSION   DASQYP010000306 DASQYP010000000
VERSION     DASQYP010000306.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 3281)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3281)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3281
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_159749"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..565
                     /locus_tag="VE783_09960"
     CDS             <1..565
                     /locus_tag="VE783_09960"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF045194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HYX53762.1"
                     /translation="HRFLLSVGRLDRVKRGDFLIRALSSLPEDVALVFAGPDAGCRDE
                     WLRLAQDLGLAKRVKILGEVSDADLKAAYQTCSALVLASRYEGLPTVILEAMALGAPV
                     VASATGGTSWLITPGETGFLFAYDDASAFAAAVQSALAPEVKQIVSKAHEMVAKQYSW
                     EANLPRIAALYAARSAAHAPEAVAAGR"
     gene            572..1975
                     /locus_tag="VE783_09965"
     CDS             572..1975
                     /locus_tag="VE783_09965"
                     /inference="COORDINATES: protein motif:HMM:NF042780.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6716 putative glycosyltransferase"
                     /protein_id="HYX53763.1"
                     /translation="MKSLSWNSVFERFAPFEGTSLYAIRTDAFFHLALESSSRRKFAL
                     KNLLYPATIWRRSRKAQELAALPRGNVRYVFTCDYEAEPGFGTLRPLLRRFGNESLLI
                     ATDAVARERAAEVQSFGAELINLDAGAYAAARGRFAELWERAGHELEQLLASQQTAMR
                     DTFLRSRRVLKTLLVKSYVYREVYRRCFTSLPGLSGVITHNDFTASSYLACAAAREAG
                     VTSFTLQHGFPTDEYFPISADHYLVWGERFRDVMAAKGARTGALSITGAPRLDGLAAQ
                     RAQIDSQGDGGRVLFLSQSHSPLFTHDEHTKILSFLAPVASDPWWKLSVRLHPQEEEA
                     GFRHLSGLGKTSIAPKDVPLMEALKNADLVLACNSTAMLEAMALGVPVVQIAPKEVQD
                     RTGIVAACRRAETPEQLRQVLISLVDPGSRRKLIAEQDQLLGSYLANFGSATDAAARL
                     IRELTTVQSTDAMEARA"
     gene            1975..>3281
                     /locus_tag="VE783_09970"
     CDS             1975..>3281
                     /locus_tag="VE783_09970"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53764.1"
                     /translation="MYLAFLYTYFAWIAVQNLVLPWAYQQGLVSAVTVGVLMAGKEVV
                     LLIALLTLAYRAFQKGWRFNTPDKFALGYLALLTFYLCFGPQIFGSTVPFSIRAISMR
                     ALISLVLFYFWGRLSFLKFGELRKLLLFILGLQVATAAFGIFEWALLPSSFWSSTVGS
                     GAFMLDVKGLLEGQNVIDGLPSNMFRFGIRRLISSYGDPLAMGIASVFPLLACVAVML
                     QRKGQEGAESLRKWAVWTGVIGAALLLTIGRESIGAAVLGVAIVFWWSGKVRNIAVPA
                     AVVAVALLFVPQVWTWVSDTLTFREESAATHLSLIYAGWERAPEMVTGKGLGEAGGWA
                     FSLAGVESEVGENSYFELMAQTGLLSVLLLLGFLVSFARQSLWYGRKFPDLIVSASFM
                     AAAAHIIARSVMAMFSPSLFGVIPLASFFFVCGAGFTTMQRMGV"
BASE COUNT          562 a          949 c         1033 g          737 t
ORIGIN      
        1 gcataggttc ctgctctcgg taggaaggct cgatcgcgtc aagcgcggcg atttcctgat
       61 ccgcgcgttg tcatcattgc ccgaagacgt ggccctggtt tttgccggac ccgacgcggg
      121 ctgtcgcgat gagtggctgc ggctggcgca ggaccttggg ttggcgaaac gggtaaagat
      181 tctcggcgaa gtttcagacg ctgacctgaa ggccgcctac cagacctgtt cggcgctggt
      241 gctggcttcg cgctatgaag gcctgcccac ggtgatcctt gaagccatgg cgctgggcgc
      301 acccgtggtg gcgtcggcca ccggaggaac ttcatggctg atcacgccgg gggaaacggg
      361 cttcctgttc gcctatgacg atgcctccgc atttgccgca gcggtgcagt ccgcgcttgc
      421 gcccgaggtg aaacaaatcg tgagcaaagc gcatgagatg gtagcaaagc agtactcgtg
      481 ggaggcgaat ctcccgcgga ttgccgcgct gtacgcggcc agaagcgcag cccacgcgcc
      541 ggaggcagtt gccgccggac ggtaacaacg tatgaaatcg ctcagttgga attcggtgtt
      601 cgagcgcttt gctccattcg agggcaccag cctgtatgcc attcgcacgg acgccttctt
      661 tcatctggcg ctggaaagct ccagccggcg aaagtttgcc ctcaagaatc ttctttatcc
      721 cgcaactatc tggcggagat cgaggaaggc ccaggagctt gcggccttgc ctcgggggaa
      781 cgttcgttac gttttcacat gtgactacga ggcggagccg ggtttcggaa cgttgcgccc
      841 gctcttgagg cgattcggga atgagtcatt actcatcgcc accgacgcgg ttgctcgcga
      901 gcgagccgct gaagttcaga gctttggcgc agagcttatc aatctcgatg ctggggccta
      961 cgctgctgcc cggggccgct ttgcggagtt atgggaacgt gcgggccatg aactggagca
     1021 gctcctggcg tcacagcaaa ccgcaatgcg cgacactttc ctgcgcagcc ggcgcgtgct
     1081 gaaaacgttg ctggtgaaat cttacgtcta tcgtgaggtc tatcgccgct gcttcacttc
     1141 cctgcccggg ctctcagggg tgatcacgca caatgacttc accgcctcca gttacctggc
     1201 gtgtgcggcg gcgcgggagg cgggcgtgac cagcttcaca ctgcagcacg gcttccccac
     1261 ggacgaatat tttcccatct ccgccgatca ttatctggtg tggggagagc gcttccggga
     1321 tgtgatggcg gccaaaggcg cgcgaactgg cgcattgtcg ataaccggag caccgcgcct
     1381 ggatggcctg gctgcgcagc gggcgcagat tgattcccag ggcgacggag gcagagttct
     1441 cttcctctcg caatcgcact cgccgctttt cacgcatgac gaacacacaa agatactcag
     1501 cttccttgcg ccggttgcga gcgatccgtg gtggaaactt tcggtgcggc tgcaccccca
     1561 ggaagaggaa gccgggttcc gccatctgag cggactgggc aaaaccagca tcgctcccaa
     1621 agacgtaccg ctgatggaag cgctgaaaaa tgccgatctg gtgctggcct gcaactccac
     1681 ggcaatgctt gaggccatgg cgctcggcgt tcccgtggtg caaatcgcgc ccaaagaagt
     1741 gcaggaccgc acaggaatcg ttgcggcgtg ccgccgggcg gagacgccgg aacaactccg
     1801 ccaggtcctg atttcgctcg ttgatcccgg ctcgcgccgg aaactgatcg ctgaacaaga
     1861 ccagttgctg ggaagttatc tggcaaattt cggctccgcc acggatgctg ccgcccggtt
     1921 aatccgcgag ctcaccaccg tgcagtccac ggatgcgatg gaggcgcgcg cctgatgtat
     1981 cttgcgttcc tctacaccta ctttgcctgg atcgcggtgc agaacctggt gctgccctgg
     2041 gcgtatcagc aagggctagt ttcagccgtg accgtgggcg tgctgatggc gggcaaggaa
     2101 gttgtgctgc tgatcgccct tctgacactt gcttaccgcg cttttcaaaa ggggtggcgc
     2161 ttcaacaccc cggataaatt tgcgctcggc tacctcgcgt tgcttacttt ctatctctgc
     2221 tttggccctc agattttcgg ctcaaccgtg ccattctcga ttcgcgcaat ctccatgcga
     2281 gccctgatct cgctcgtgct tttttacttc tggggccgtc tgagcttcct gaagtttgga
     2341 gagctgcgga agctgctgct gttcattctc gggctgcagg tagccaccgc ggcgtttgga
     2401 atcttcgaat gggcgctgct gccttcctcc ttttggagta gcaccgtggg aagcggcgct
     2461 ttcatgctcg acgtgaaggg ccttttagag gggcagaacg tgattgacgg gctgccctcg
     2521 aacatgttcc ggttcggcat ccggcgcctg atctcgagct acggcgatcc tttggcaatg
     2581 ggcattgcca gcgtcttccc gttgcttgcc tgtgttgcgg tgatgctgca gcggaagggg
     2641 caggaaggcg cagagtcgct gcgcaaatgg gctgtctgga caggcgtgat tggcgcggcg
     2701 ctgctgctga ccatcggccg cgaatccatc ggggctgctg ttttgggcgt ggcgattgtt
     2761 ttctggtggt cgggcaaggt acgcaacatc gctgttccgg cggcagttgt ggcggtggcg
     2821 ttgttatttg tcccgcaggt ctggacctgg gtttctgaca cactcacctt ccgtgaagaa
     2881 agcgcagcca cccacctcag cttgatttat gccggatggg aacgcgcccc cgagatggtg
     2941 acgggcaaag gccttggcga ggccggcggc tgggcttttt cgctggcggg cgttgaatca
     3001 gaagtgggcg agaactcgta ttttgaactg atggctcaga cgggactgct cagcgtgctt
     3061 ctcctgctgg gcttcctggt aagcttcgcc aggcaatctc tttggtacgg cagaaaattc
     3121 cctgacctga tcgtctccgc cagcttcatg gctgcggctg cgcacatcat tgcccgttcc
     3181 gtgatggcga tgttttcacc ttcattgttc ggtgtgattc cgctggccag cttcttcttt
     3241 gtatgcggag cgggattcac gaccatgcag cgcatgggcg t
//
LOCUS       DASQYP010000307         2110 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_289032, whole genome shotgun sequence.
ACCESSION   DASQYP010000307 DASQYP010000000
VERSION     DASQYP010000307.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 2110)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2110)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2110
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_289032"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>2110)
                     /locus_tag="VE783_09975"
     CDS             complement(<1..>2110)
                     /locus_tag="VE783_09975"
                     /inference="COORDINATES: protein motif:HMM:TIGR03434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HYX53765.1"
                     /translation="LVRGIPANGCSYVDLLALRQSGVFAAVAGVQNHQLTLTGAGDPT
                     VVETVVVTPEIFPILNVTPLAGRYLYPEDNTSGAAPAVVVSEGLWRARFGADSTLVGH
                     AIHLDQQAYTVVGIMPGGFRTPEAGPKQEVWIAAAKDPLFSAWMPSPGGHWLRLIAKM
                     QSAGPLAPIQSRLDALSAQLITQSPAQRTGWSLRVAPLQEVMVGEIRTPLLVLLGAVG
                     LVLLLACVNIANLLLARATSRSREVALRQAVGAGRGRIIRQFLTESAVLGLLGALVGV
                     ALAYSSTHALALLLPENIAAQRTIMLDGWVLGVALLISMAASIGFGLAPAIITSRTDV
                     QSHLKHGSAQAGSDRGSLRLRSLLTRAEIALAMVIVVAAGLLVRSLVKITSIDPGYTP
                     EHVLRAEVSLPRYQYKTVQQWATFSDALLERVQAQRGLEESAIAIPPPMDGQINLSFL
                     ISGAAPLPPGAVQTANYVSASPRYFRVMGVPLLRGRVFTAEDSAASSRVALISETMAR
                     RYFKNENPIGKKLVFGFPPDTDVPREVIGVVGDVRDFALTQEPGPMMYVPFSQAPFWG
                     DVLVIKSTLPAATIVAGIRQAVDGIDKNLPITDVETLPDALATSVAQPKFRTWLLAAF
                     GAVALLLAAAGVYGVVSYSVASRTKEFGVRATLGASPRSIGQMVLREGLWLAGAGLGV
                     GLLAALAVTQLLKTQLFGVAT"
BASE COUNT          449 a          656 c          629 g          376 t
ORIGIN      
        1 gtcgctacac cgaaaagctg agtcttcagc agctgagtta cggcaagggc ggctagcaat
       61 ccaacgccga gtcctgcacc tgccagccaa aggccttcgc ggagtaccat ttggccaatg
      121 gagcgtggag atgcgcccag cgtggcgcgc acgccaaact ctttggtccg gctggccacc
      181 gagtaagaga cgactccgta tactccagcc gcagccagca gcagggccac cgcgccgaat
      241 gcggccagca gccaggttcg aaacttcggc tgcgcaacgg atgttgccaa tgcgtccggc
      301 agcgtttcca cgtcagtgat aggaaggttc ttgtcgattc catccaccgc ctggcgaatt
      361 ccggctacga tggttgctgc aggtaacgtg ctcttgatca ccagcacatc accccagaac
      421 ggcgcctggg aaaagggaac atacatcatt ggaccgggct cctgcgtgag agcaaaatcg
      481 cgcacgtcgc cgactacccc aatgacttca cgagggacgt cagtatccgg cggaaagccg
      541 aatactagct tcttgccgat cggattttca ttcttgaaat agcggcgcgc catggtttca
      601 ctgatgagcg ccacccggga tgaggcggca gaatcttccg ccgtgaacac gcgtccgcgc
      661 agcagcggga ctcccatcac gcgaaagtat ctcgggctcg cagaaacata attagcagtc
      721 tgaactgctc cgggcggcag cggcgctgcg ccggaaatca ggaatgagag attgatctgc
      781 ccatccatgg gtggagggat ggcaatggcg gattcctcta aaccgcgctg cgcctgtacg
      841 cgctccagca acgcatcaga aaacgtggcc cactgctgta ctgtcttgta ttggtaacga
      901 gggagtgaga cttccgcccg cagcacgtgc tccggcgtat agccgggatc gattgacgtg
      961 attttcacca ggctgcgcac cagcagaccg gctgccacaa caatcaccat ggcgagtgca
     1021 atttccgctc tcgtcagcaa gctacgcagt cgcaggctgc cgcgatcgga acccgcctgc
     1081 gcggagccat gcttcaggtg tgattgcacg tcagtgcggg aggtgatgat ggcgggagcc
     1141 agtccaaagc cgatgctcgc agccatggaa atcaggagag caacgccaag cacccagcca
     1201 tcaagcatta tggtacgttg cgccgctata ttttccggca ggagcagcgc cagcgcatgc
     1261 gtgctgctgt aagcaagagc cacgcccacc agagcgccca acagtccgag cactgcgctc
     1321 tccgtgagaa actgccggat gatgcgcccg cgtccggcgc ctacagcctg ccgcagtgct
     1381 acttctcgcg atcttgaggt tgcacgcgcc aggagcagat tcgcaatgtt cacgcacgcg
     1441 agcagaagaa ccagtcccac tgcgcccagc aggaccagca gcggcgttct gatctcgccg
     1501 accataactt cctgaagcgg cgccacacgc agcgaccatc ctgtgcgttg ggcgggtgac
     1561 tgcgttatca gctgagcact tagcgcatcc agcctggact gaatgggagc gagtggaccg
     1621 gcggattgca tcttcgcgat caggcggagc cagtgtcctc cggggcttgg catccatgcg
     1681 ctgaaaagtg ggtccttagc tgcggcaatc cagacttcct gtttcgggcc ggcttccggc
     1741 gtgcggaaac ccccgggcat gatgccgacc acggtatagg cctgctgatc cagatgaatt
     1801 gcgtggccaa ccagagtact gtcggctccg aagcgggccc gccacagtcc ctcactcacc
     1861 accacggccg gtgccgcccc agaagtgttg tcctcaggat agagatagcg gccggcgagc
     1921 ggcgtgacgt tcaggatcgg gaagatttca ggcgtgacca ccaccgtttc aaccaccgtg
     1981 ggatcgcctg ctccggtgag cgtgagttga tggttctgca ctcccgctac agcggcgaac
     2041 acgccgctct ggcgcaacgc cagaagatcg acgtaagaac agccattcgc ggggattccc
     2101 cgcaccagat
//
LOCUS       DASQYP010000308         3273 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_189215, whole genome shotgun sequence.
ACCESSION   DASQYP010000308 DASQYP010000000
VERSION     DASQYP010000308.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 3273)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3273)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3273
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_189215"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            280..1218
                     /locus_tag="VE783_09980"
     CDS             280..1218
                     /locus_tag="VE783_09980"
                     /EC_number="3.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013672.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide deacetylase family protein"
                     /protein_id="HYX53766.1"
                     /translation="MAVAEQLKALGRTISLSCGISARIAKRQACSRVIMYHGVTSATV
                     ENFARQLHYLSETFRVVPLSAMIRNLERQGTPTGNEIVLTFDDGLRNNLTLVYPLLQK
                     LRVPATFFICPGLIGSGRWLWNHEARCRLQTLGRESRMQLARKVGATAHTVEGMVGWM
                     KELKLQERRRVEDVLRVATRRYTATTEQREAFDIMSWDELKSLDPELITIGSHTFSHP
                     ILTTLSDDQLDFELRESRRILEEKLDREVGYFCYPNGSYDARVHRAVRAFYSAALTTE
                     SGLVTNNSSHDLHRLPRIPAAETTALMAWRLHRPGA"
     gene            1221..2987
                     /locus_tag="VE783_09985"
     CDS             1221..2987
                     /locus_tag="VE783_09985"
                     /inference="COORDINATES: protein motif:HMM:NF013607.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-grasp domain-containing protein"
                     /protein_id="HYX53767.1"
                     /translation="MAVLVLDGHSRAALETMQSLGRAGADVDISAESTSVLAMRSRYA
                     RRKLKQPGSTDQDAFASWLREQDSARNFDLIVPATEASLLCLRTFDESSPLRLKAVLP
                     SNESLDIALDKRATCRLARDLGIPVPGSRLISTLEEIGDSDQFPVVLKPVRSKVLMHG
                     ELRTLAVAIVKTDEQRREQLRRWLPFTPVLQQQYVAGRGVGIEFLFDRGRPLWHFAHE
                     RIHEYPLSGGASSYRRSIVPPAHMLDDAQRLMSALRWHGVAMVEFKMDSDGQHWLMEI
                     NPRLWGSLALPIDAGVNFPLGLLKVAQGESPGPQPAYKTGYYTRDVATDVEWFKANLR
                     ASHSNPLLMTRPRLLSFFGLLRPLIGRESWDFFDWHDLGVTRDVLSTIIGSNFAPIIR
                     KLKAWKQERAWLTRHKQLLARIRLGEVTNIVFVCLGNICRSPFAAALARDRFPSLQIH
                     SSGFYHREGRATPEKMQRTVTHFGVDLSLHRSSRLTLQLLEQCDMVLVMDRENMAELE
                     KQFPEAASKTTFLGLFGSPASITVDDPYTADATTTQQICEQMVSALDGLTVCLRNSHS
                     TAATNESLGFAKGRGALRFLRK"
BASE COUNT          684 a          935 c          922 g          732 t
ORIGIN      
        1 ttcccgcttc acggtcaagt gccttgtttc tggtactttg ccactttaga gaggcgcctg
       61 gcttgaaaag agtgaaaaat gttgcacaac tcaggcaagc ttattcgtcc cggcaaaacg
      121 gtatgagatg agtttcccgc tgcccgccgg gcgtcaagcc ccagcaagca aaggactaag
      181 cggattttac tgagtatcgc ctcggcatta ttgcctcgtc cgcgaaaggc agcgaaactg
      241 cttgcttact atcttcgaag tcattgtgtg aggtaggttg tggcggtagc cgaacaattg
      301 aaggcgctgg ggcgcacgat atcgctgagc tgcggtattt ctgcgcgcat cgccaagcgg
      361 caagcgtgct cgcgcgtcat catgtatcac ggcgtcacgt ccgcgacggt cgaaaacttt
      421 gcccggcagc tgcattatct ctcggagacc ttccgagtcg ttccactctc ggcgatgatt
      481 cgcaatcttg agcgccaggg cacgccgacc ggaaatgaga ttgtgctgac atttgacgat
      541 ggtcttcgca acaatctgac tctggtgtat cccctcctcc agaaactacg tgtaccggcc
      601 acattcttca tctgccccgg gctaatcggc tcaggccgct ggctgtggaa ccatgaagcc
      661 cgttgccggc tgcagacgct gggacgtgaa agccggatgc aacttgcgcg caaagtcgga
      721 gcgaccgccc acaccgttga aggcatggtt ggctggatga aagaattgaa gctgcaggag
      781 cggaggcgag tggaagatgt gctacgagtc gcgacccggc gctacactgc cacaacggag
      841 caacgcgaag cgttcgatat catgagctgg gatgagctta agtcgcttga tcccgagttg
      901 atcaccatcg gctcccatac cttcagtcac ccgatcctca ccactctttc tgatgaccaa
      961 ctcgattttg agctgcgcga aagccgccgc atattggaag aaaagctgga tcgagaggtc
     1021 ggatactttt gctatccaaa tggatcttac gatgcccgcg ttcatcgcgc agtgcgcgct
     1081 ttctactctg cggcgctgac cacagaaagc ggcctggtga ccaacaactc atcgcacgac
     1141 ctgcatcggc tgccgcgcat acccgccgct gagacaacag ctttgatggc gtggcggctg
     1201 caccgccccg gagcataaca atggcggtac tggtccttga tggtcacagt cgtgcggctc
     1261 tggagacaat gcagagcctg ggacgtgccg gagccgacgt tgacatttca gccgagtcca
     1321 ccagcgttct cgctatgcgc tcacggtatg ccaggcgcaa gctcaagcag ccaggctcga
     1381 cagatcagga cgcctttgcc tcatggctgc gcgaacagga ttccgcccgc aactttgacc
     1441 tgattgtccc cgccacagag gcatcgctgc tttgtctgcg aaccttcgat gaatcaagcc
     1501 ctctccgcct gaaagctgtt ctgccttcca atgagagtct tgatatcgca ttggataagc
     1561 gtgcgacctg ccggctggcg cgcgaccttg gtatacccgt gccgggaagc cggctcattt
     1621 caacactcga ggagatcggg gattccgatc aattcccggt ggttctgaag ccggtccgca
     1681 gcaaggtctt gatgcacggc gagctgcgca ccctggctgt ggcaatcgtg aagacagacg
     1741 agcagcgacg cgaacagctt cgccgatggc tgccatttac accggttctg cagcagcagt
     1801 atgtagccgg ccgcggagta gggatcgagt tccttttcga ccgcggcagg cctctctggc
     1861 atttcgctca tgagcgaatt cacgaatacc cactatctgg tggcgccagt tcctaccggc
     1921 gctccattgt tccgcccgca catatgctgg acgatgccca gaggctgatg tcggccctgc
     1981 gctggcatgg tgtcgccatg gtggaattca agatggactc tgacgggcag cactggctga
     2041 tggaaatcaa tcccaggctc tgggggtcgc tggcgctgcc cattgatgca ggggtgaatt
     2101 tcccgcttgg tctgttgaaa gttgcgcaag gagaatctcc cggtccgcag cccgcgtata
     2161 agacgggcta ttacacccgg gatgtggcca ctgatgttga gtggttcaag gcaaatctgc
     2221 gggccagcca ctccaacccg ctgctgatga cccggccacg gctgctctcg tttttcggcc
     2281 tgctcagacc attgattggg agagaaagct gggacttttt cgactggcac gacctcggcg
     2341 ttactagaga cgtgctctcc acaataatcg gctccaattt cgctcccatc atccgcaagc
     2401 tcaaagcgtg gaaacaggag cgcgcatggc tgactcgtca caagcagttg cttgcccgaa
     2461 tcaggctagg cgaagtgacg aatatcgtgt tcgtgtgtct tgggaacatt tgccgcagcc
     2521 cgtttgccgc ggcactggcc agagatcgct tcccttcgct ccagatacat tccagcgggt
     2581 tttatcatcg tgagggccgc gctacaccgg aaaagatgca gcgcaccgtc actcatttcg
     2641 gagtcgatct ttcgctccat cgctcttccc ggctcacgct ccagctgttg gagcaatgtg
     2701 acatggttct ggttatggat cgcgaaaaca tggcagagct ggagaaacaa tttcctgaag
     2761 cggcttccaa gactactttt cttggactgt ttggcagccc cgccagcatc acggttgatg
     2821 atccttacac ggccgacgcc accacgaccc agcaaatctg cgagcagatg gtttccgcac
     2881 tcgatgggct aacggtttgc cttcggaata gccactccac tgcggctacc aatgagagtt
     2941 tggggttcgc taaaggcagg ggtgcattga ggtttctgag aaagtaaatc tgaggcgcaa
     3001 aatgtgcaaa gttttgcgca gctcttagcc tgctcaaggc gtgagctggt caatatagcc
     3061 taagtccatt ctgttcatag gcttgcatga ctaaggtttg gaagcacagt tgcccattaa
     3121 cttggggttg ttaccgccga actgggaaga aggtctagcg gatcatgtat tcagcatttt
     3181 ttggcctgaa acaggagcca ttccggttgc agccggaccc acgctttctg cacctggcag
     3241 agcctcatcc caacaccttg cgcgccctgg ttg
//
LOCUS       DASQYP010000309         5209 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_289061, whole genome shotgun sequence.
ACCESSION   DASQYP010000309 DASQYP010000000
VERSION     DASQYP010000309.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 5209)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5209)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5209
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_289061"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..534
                     /locus_tag="VE783_09990"
     CDS             <1..534
                     /locus_tag="VE783_09990"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53768.1"
                     /translation="IKEFDMTSKRFAICILLALMAASLAQTTDAGWTTYKSNDGKFSV
                     VFPIQPEESSSVDKSVTLHTYKVLQRPRIYIVIYSDYPDADLALDTATRIKAERDGFV
                     KGLTNATVIAERQFSFKRGNSELPALEFTSETATVTYKSLIILDGRRVYFVCAGSIKG
                     NDSAAQFERFLGSFALN"
     gene            636..989
                     /locus_tag="VE783_09995"
     CDS             636..989
                     /locus_tag="VE783_09995"
                     /inference="COORDINATES: protein motif:HMM:NF016152.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MmcQ/YjbR family DNA-binding protein"
                     /protein_id="HYX53769.1"
                     /translation="MPKPAITFATVKKIGLTFPGVEESTAYGSPALKVRGKLMVCIPT
                     HRTAEPGSLAVIIDRMDRAELLANAPDVYYITDHYLNYDSVLVRLARANEEVLHDLLG
                     MAHKFVTAKAKRKAR"
     gene            1262..4465
                     /locus_tag="VE783_10000"
     CDS             1262..4465
                     /locus_tag="VE783_10000"
                     /inference="COORDINATES: protein motif:HMM:NF024180.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CHAT domain-containing protein"
                     /protein_id="HYX53770.1"
                     /translation="MLPIFVIFLWLLIVPGARVAAQDSIPTGEVTPGAVIEKFEDEFA
                     GPLKAGMKEGDVLLSWKQGDRHGEISSPWDINVLVVEMLPRGPVVFRGRRGQNDQEWT
                     VTKLWWGTRTRFNFNADWLDWYLRAAGMRDQNQGAAAARMFLDRAKQTSSHELAAWLQ
                     TEAGRASAAAQTAKESDEAFRLAAQTAETLPGASRAALYLLWAEYRYNLNEVEGLEAA
                     ATQALQHAENAHFPFMQFQSLNWLSGACGIRGDVRKGFAYALRSHEIAYGLDPESYTT
                     GSSFVTLGAFAWDMGDISGAESYFLKALPIFERKGPHTLGKAYLLLDLSELAKRRGDL
                     GTAATYMADALKLHGEIDNDSRGYSTLLNEAGELALAMNRFDDAKRYGEESLALARKL
                     SPQGSAEEADTLQSLGKAAKAESKFESAQNLWEQSLALRRKLSQENHSTSETHLALGD
                     LLARRGDLDGAEAHYREALRVQRNSAPGTSGESSILGALARLAQKRGDQDAAIRLYAE
                     AIAALEEQETLWGGSPEHRTSQRTAFEPMFREYADLLVNHHDFAGALAVLDASKARTL
                     LEGLADWNIDVRQGVPKDLLLQEQLVRAEIRAKSEKRLEMLRAGRSDREIGALEKELQ
                     SLDVQRAQVSAQILASSPAYGALTRPRLLSAQEIQQQLLDRNTLLLEYSLGDQQSYVF
                     AVSTDSVQVFPLPERAIIAAQARRLYEQWSSSESTTAEKNESADPEDLAQELARAILG
                     PLQKQLGRKRIVIIADDALHYVPFAALPDPSAKGGEPLALNHEIVYLPSASVLAELRT
                     LRNGVKPAEKYVAVLADPVFDAGDSRVKLARQPVPPPVAKKDVSATASAPSMTETRGD
                     DTLVRSATDFGMTRSGGALLPRLLFSRREAEGIRAATSKYPSSVRLDFNASRKAVLDP
                     ELGQYRIVHFATHGLVNNLHPEFSGLVLSLVDRDGRAQDGFLSLQDIYNLKLTADLVV
                     LSACNTALGKEVRGEGLVGLTRGFMHAGTNRVVASLWKVSDAATAELMTEFYRGMTKD
                     ALTPAAALRQAQITLWREKRWHSPYYWAAFQIEGEWQ"
     gene            complement(4910..>5209)
                     /locus_tag="VE783_10005"
     CDS             complement(4910..>5209)
                     /locus_tag="VE783_10005"
                     /inference="COORDINATES: protein motif:HMM:NF019157.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tannase/feruloyl esterase family alpha/beta
                     hydrolase"
                     /protein_id="HYX53771.1"
                     /translation="ESSLRLFMAPGMQHCGGGPGPNNFGQAGRPSDPQHDVHEALEQW
                     VEKGTAPEKLIATKYIDDDRARGVQMTRPLCPFPQRARYKGKGDVNDAANFICAP"
BASE COUNT         1167 a         1432 c         1597 g         1013 t
ORIGIN      
        1 atcaaggaat tcgacatgac atcaaaacga ttcgcgatct gcatcctgct ggcgctgatg
       61 gcggcgagcc tggctcagac aactgacgca ggctggacga cttacaagag taatgacggc
      121 aaattttccg tggtttttcc cattcagccg gaggaaagtt catccgtcga caagagcgtg
      181 acgctacaca cctacaaagt tctccagcgc ccgcggatct atatcgtcat ctattccgat
      241 tatccggacg ccgatctggc gctggacaca gccacacgga ttaaagcgga gagggacggc
      301 ttcgtcaaag gcctgacaaa cgcaaccgta atagccgaac gccagttcag cttcaagcgc
      361 gggaactccg agctgccggc gctcgagttc acctccgaga cggccaccgt gacttacaag
      421 agcctgatca tcctggacgg gcggcgggtg tattttgtct gcgccggaag cataaaaggc
      481 aacgattccg ccgcgcaatt tgagaggttc ctgggttcgt tcgctttgaa ttaatcagca
      541 ctcaatggcg agactcctga aggccgccca agggagactg tcatcgcggc ggattgctca
      601 acagcgcaca gagtatcctg ctaccatgtt ggcccatgcc caagccagcc atcacctttg
      661 caacggtgaa gaagattggg ctcactttcc ccggagtgga agagagcacg gcctatggat
      721 cgcccgcgct gaaggtgcgt ggcaagctga tggtgtgcat tcccacgcat cgcacggccg
      781 agccgggatc gctggccgtg atcattgatc gcatggaccg cgccgagctt ctggccaatg
      841 ctcccgacgt ttactacatc acggatcatt acctgaatta tgactcagtg ctggtgcggc
      901 tggcgcgggc gaatgaggaa gtgctgcacg acttgctagg catggcgcac aagtttgtga
      961 cggcgaaggc gaagaggaaa gcgcgctgac ggcctggccg ttcctgcgta cctgagcggc
     1021 taaagccgga tgaggttagt aaggtcggct ccagcgtcgc gccctcgcga acaggatcac
     1081 cccccgcccg tttagggcgg ggagaacgcg atcaggaaat ctcttgcatt cgcgcctaga
     1141 gcaatgtcaa atgctgcgta tccgtgaacc catgcgtctt ttgcgaattc tttttgcttc
     1201 ggtatcggtt atttcgacct caatctacag caaacttcag tctgcgaaaa catgttggcc
     1261 gatgctgcct atctttgtga tttttctatg gctgctgatt gtgcctgggg cccgagtcgc
     1321 cgctcaagac agcatcccca cgggcgaggt tacgcccggc gcagttattg agaagtttga
     1381 ggatgagttt gccggtccgc tgaaagcggg aatgaaggaa ggcgacgtac tgttgagctg
     1441 gaagcaggga gaccgccatg gagagatcag ctcgccatgg gacatcaacg tgctggtggt
     1501 cgaaatgcta ccgcggggcc ccgtggtttt tcgcggccgg cgtggccaga acgaccaaga
     1561 gtggacggtc acgaaacttt ggtggggaac gcggacccga ttcaacttca acgcagactg
     1621 gctcgactgg tacctgcgag cagccggcat gcgtgatcag aaccaagggg ctgctgcggc
     1681 gcgcatgttc cttgacaggg ccaaacaaac cagttcgcat gaattggcag catggctgca
     1741 gactgaggca ggcagagcct ccgctgcggc acagacggca aaagaatccg acgaagcttt
     1801 tcggctcgcc gcgcagacag cggagacgct tcccggagcg tcacgggcgg ccctgtatct
     1861 actgtgggcc gagtaccgtt ataacctgaa tgaagtggag gggctcgaag ccgcggccac
     1921 ccaggcgctg caacacgccg agaacgcgca ctttcccttc atgcaattcc aaagtctaaa
     1981 ctggctttcg ggagcatgcg ggatcagagg agacgtgaga aaagggttcg cgtacgcatt
     2041 gagaagtcac gaaatcgcgt acgggctcga tcctgaaagc tatacaacgg gcagcagttt
     2101 tgtgactctt ggcgcatttg cctgggacat gggtgatatc tcgggagcgg aatcgtattt
     2161 cctgaaggca ctcccgattt ttgagcgtaa ggggccgcat actctgggca aagcctacct
     2221 gctcctggat ctaagcgagc ttgcgaaaag gcgcggtgac ctgggtactg ccgccacata
     2281 catggcggat gcactcaaac tgcatggcga aatcgataac gacagcaggg gctacagcac
     2341 cttgctgaac gaggcaggag agctggcgct tgcgatgaat agattcgatg atgccaagcg
     2401 atatggagaa gagtcgcttg cgctcgcccg gaagctctca ccccaaggga gcgccgaaga
     2461 agcagacacc ctgcaatctc tgggtaaagc cgcgaaggca gaatcgaagt tcgaatcggc
     2521 gcagaatctc tgggaacaga gtctcgctct caggcgcaag ctatcccagg agaaccattc
     2581 cacctctgag acgcatctcg cactcggaga cctgctggcg agacgaggtg atctggatgg
     2641 cgcggaagcg cactaccgcg aggcgctgcg ggtgcagcga aactccgcgc ccggaacgtc
     2701 tggggagagc tctattctgg gcgctctggc cagattggcg cagaaacgag gggaccagga
     2761 cgcggcaatc agattgtacg cggaagcaat agcggcgctg gaagagcaag aaacactctg
     2821 gggtggcagt cccgagcacc gcacgagcca gagaaccgcg tttgaaccca tgttccgcga
     2881 gtatgctgac ctgctggtca accaccacga tttcgccggc gctctggcag tactggacgc
     2941 ttccaaagcg cgaacgctgc tggaaggact cgcggattgg aacattgatg tgcgccaggg
     3001 agtaccgaag gacttgttac tgcaggagca gctggtgagg gccgaaatcc gggccaaatc
     3061 ggaaaaaagg ctggagatgc tccgcgccgg aaggtctgac cgggaaattg gagccctgga
     3121 aaaggagctg cagtctctgg atgtgcagcg ggcgcaagtg agcgcacaga ttcttgcgtc
     3181 gagccctgcg tacggcgctc tgacccgacc tcggttgttg agtgctcagg aaatccagca
     3241 acaacttctt gacaggaata ccctcctgct ggagtactcc ctgggtgacc agcagagcta
     3301 cgtgttcgcg gtgagcacag actcggtgca agtttttccg cttccggagc gcgcaatcat
     3361 tgccgcccag gcacgccggc tttatgaaca atggtcaagc agtgaaagca caacggccga
     3421 aaagaatgaa tctgcggatc cagaggatct cgctcaagag ctcgcgaggg cgatcttagg
     3481 gccgctacag aagcagcttg gccggaagcg catcgtgata attgcggacg atgcactgca
     3541 ctatgttcca ttcgcagcgc ttcccgatcc ctctgccaaa ggcggcgagc cgctggcatt
     3601 gaaccatgag atcgtgtacc tgccttcggc gtcagtgctt gcggagctgc gcactctgcg
     3661 aaatggtgtg aaaccggcgg agaaatacgt ggccgttctg gcggacccgg tatttgatgc
     3721 cggcgacagc cgcgtgaagc tggcgagaca accggttcca ccaccagtgg caaagaagga
     3781 tgtttcggct acggcttccg cccccagcat gacagaaaca agaggtgacg atacacttgt
     3841 gcgctcagct actgatttcg gcatgacacg gtctggagga gcgcttcttc cccggctgct
     3901 gtttagccgt cgagaagcgg aggggattcg cgccgcaaca tcgaagtatc cgtcaagcgt
     3961 caggctggat tttaacgcga gcaggaaggc agtgcttgac ccagagctgg gccaatatcg
     4021 gatcgtgcac tttgctaccc acggcctggt caacaatctg cacccggaat tttccggcct
     4081 ggtgctctcg ctggtggaca gggatggcag ggcgcaggat ggttttctga gcctgcagga
     4141 tatctacaac ctgaaactca cagccgacct ggtcgtgctg agcgcttgta acacagctct
     4201 gggtaaggaa gtgagaggag aagggctggt tggactgacc cgcgggttta tgcatgcggg
     4261 gaccaaccga gtggtcgcga gcctgtggaa ggtgtccgac gcggcgactg cggaactaat
     4321 gaccgagttc taccgtggca tgaccaaaga tgcacttacg cctgccgccg cgttgagaca
     4381 agcccagatt acgctgtggc gagaaaagcg gtggcattct ccttattact gggcagcgtt
     4441 tcagatcgag ggagagtggc agtgaaggaa tggtcttttt ctgcagctta cccagccctt
     4501 attcctcagc tcgcttcgct cacctcggca acggactggg ctcgcataat ttcgcgcctg
     4561 ccggcgctgg agtaccggga aagagcgacc aatagtagct cccgcctaca tttgcgagag
     4621 aggacacgaa ggaacacgag gattgccaca gacgagcgca gacgaacgcg ataagagcag
     4681 agaccagcgc ccaggaacag ccgatggtga gtcgggctgt cttgcgacac ctcagcggct
     4741 gaagccgaaa tcattcagcc gctttaccgc agacctaaag gtctgctcca cccttgcaag
     4801 ggcggcggca tggtgaatcc catctggatt ctcactatta cttagtagct caagctggaa
     4861 ttagtcagca gtttcatcgc agacctagag gtctgcccca ccctgccggt cacggagcgc
     4921 agatgaagtt tgccgcgtca tttacgtcgc ccttgccctt gtagcgtgca cgctggggaa
     4981 aggggcagag cgggcgggtc atctgtacgc ccctggcgcg gtcgtcatca atgtacttgg
     5041 tggcgatgag cttttccggt gctgtgccct tctctaccca ttgctccaga gcttcatgga
     5101 catcatgctg cggatcagag ggccggccgg cctggccaaa gttgttaggt ccaggaccgc
     5161 cgccacagtg ctgcatgccg ggagccatga agagacgcag ggaactttc
//
LOCUS       DASQYP010000310         2124 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_189266, whole genome shotgun sequence.
ACCESSION   DASQYP010000310 DASQYP010000000
VERSION     DASQYP010000310.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 2124)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2124)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2124
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_189266"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1847)
                     /locus_tag="VE783_10010"
     CDS             complement(<1..1847)
                     /locus_tag="VE783_10010"
                     /inference="COORDINATES: protein motif:HMM:NF015983.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HYX53772.1"
                     /translation="MKVCLISAPTANQLHATVGEADAARMMGELAPVGVLSLAAVLEA
                     RGLQPEVIDLNRIYHSWLRSPEREQTDFCRFAGEYFAGRDFDLFDLFGFSTVCSSYPV
                     TLRIAAEVRRAHPKSIIILGGPQASVVDAATLRAFPFVDVVVRGEAEHTLPELVDALS
                     GQGQLSSVAGITFRRKEDGEIVRTPDAPLILDLDTLLFPAFHLFPDVSHCRHFPLELG
                     RGCPFSCTFCSTNDFFRRRFRLKSPAQMISDMRRVKQSYGISSFELVHDMFTVDRKRV
                     VAFCEALIESGEEFTWGCSARTDCIDEKLIALMARAGCRGIFFGIETGSRRMQKIIDK
                     GLELNDSAERVRSCDKHKINTAVSLMAGFPEETIEDLRDTAAFFVDSLRYDHADPQLS
                     ILAPLAGTPITTHHKDALLLNDDAGDMSYRGWVQEPEDHALIAGHPEIFSSFYSAPLP
                     HLEREFLKELRDFLLNGAHAFRRLLLGLHQDSGNVVEVFEQWREWRMRNDVDFSRLNR
                     TLYYAQSGFVRDFLRFLRAHYIPASSRAPLAITVLVEYEAAVLERNEVPGSSAAQVAD
                     DQEQLLAPESRPQLLPGVEVVRLPADYHEIVRRLRQRSPLDDVPEKPVKL"
BASE COUNT          459 a          665 c          605 g          395 t
ORIGIN      
        1 agctttaccg gcttttccgg cacatcatcg agcgggctgc gctgccgcag ccgtcggacg
       61 atctcatggt agtcggccgg caggcgtacc acctccactc cgggtagcaa ctgcgggcgg
      121 ctctccggcg cgagcagctg ctcctgatca tcggcaacct gtgccgccga cgagccagga
      181 acttcgttgc gctccagcac ggccgcttcg tactccacca gcacggtaat cgccagcggc
      241 gcccggctcg acgcgggaat gtagtgcgct cgcaggaagc gcagaaaatc ccggacaaag
      301 ccgctctgcg cataataaag agtacggttg aggcgcgaaa aatccacgtc gttccgcatc
      361 cgccactccc gccattgctc gaacacctcc accacgttgc cgctgtcctg atgcagcccc
      421 agcagcagcc tgcggaaagc atgcgcaccg ttcagcagga agtcgcgcag ctctttaagg
      481 aactcgcgct ccaggtgcgg caggggcgcg gagtaaaagc tggagaaaat ctccggatgc
      541 ccggcgatca gcgcatggtc ttcgggctcc tgcacccatc cccggtaaga catgtcaccc
      601 gcgtcatcat tcagcagcag cgcatcttta tggtgcgttg tgatcggcgt gccggcaagc
      661 ggagccagga tgctgagctg cgggtcggcg tggtcatagc gcagtgagtc gacaaagaac
      721 gcggccgtat cgcgcagatc ttcaatcgtc tcctcaggga agcctgccat gagagaaacc
      781 gcggtgttga tcttgtgctt gtcgcaggag cgcacgcgct ctgccgaatc gttcagctcc
      841 agccctttat cgatgatctt ctgcatgcgc cgcgagccgg tctcaatacc gaaaaagatg
      901 ccgcggcagc cggcgcgcgc catcaacgcg atcagctttt cgtcaatgca atcggtgcgc
      961 gcgctgcagc cccaggtgaa ttcctcgccg ctctcgatca gcgcctcgca aaacgccacc
     1021 acccttttgc ggtccaccgt gaacatgtca tgaaccagct caaaggaact gatgccgtag
     1081 ctctgcttca cccggcgcat atcggaaatc atctgtgcgg ggcttttcag ccggaatcgg
     1141 cggcggaaaa aatcgttggt cgagcagaaa gtacaggaaa aaggacagcc gcgtcccagc
     1201 tccagtggga agtggcggca atggctaacg tccggaaaga gatgaaaagc agggaacaga
     1261 agcgtgtcca gatccaggat cagaggcgcg tcgggcgtgc gcacaatctc cccgtcttct
     1321 ttccggcgaa acgtaattcc cgcaaccgat gagagttgac cctgcccgga cagcgcgtcc
     1381 actagctcag gcagcgtatg ttccgcctcg ccgcgcacca ccacgtccac aaaagggaag
     1441 gcgcgcagcg tggcggcatc caccaccgag gcttgcggtc cgcccaaaat aatgatcgat
     1501 tttggatggg cgcgcctgac ctctgcggct atgcgcagcg tgactggata actgctgcaa
     1561 accgtgctga agccaaacaa atcgaagaga tcgaaatcgc gtccagcgaa gtactcgccg
     1621 gcgaagcggc agaaatcggt ttgctcccgc tccggcgacc gcagccaact gtggtagatc
     1681 cggttcaggt ctatcacttc aggttgcagt cctctggctt ccagcacggc ggccaggctc
     1741 agcacgccaa ccggcgcaag ctcacccatc atgcgagcag cgtcggcctc gcccacagtc
     1801 gcgtgaagct ggttggccgt gggcgcactg ataagacaaa ctttcatgcg tgtcgttcgc
     1861 ggtgaacaga actccgctta ccacctgatt cacactggtg gcgatgagcc atgagttcgg
     1921 tatttggtac tttggtactt ggaatttcat acttggtgct taggcactcg aaccacgggt
     1981 ccggcacgcg tgactgtcac ctcggaacgc atctccatgt gagctactaa atcgcttatg
     2041 ccaagtacca ccaagtacca aataccaaat actaaatacc cgggttctat tacgccggag
     2101 gcacatcagt cggcacgtcg catc
//
LOCUS       DASQYP010000311         2743 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_12757, whole genome shotgun sequence.
ACCESSION   DASQYP010000311 DASQYP010000000
VERSION     DASQYP010000311.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 2743)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2743)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2743
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_12757"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            21..863
                     /locus_tag="VE783_10015"
     CDS             21..863
                     /locus_tag="VE783_10015"
                     /inference="COORDINATES: protein motif:HMM:NF024579.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53773.1"
                     /translation="MNNKLKTLVIAAAALAILSGAGCSKLRARDQLNKGVQAYKNAKY
                     EEAINHFQQAVDFDPTLLNARLYLATAYAQQYIPGADTPDNNRMAEEAIDQFKKVLDM
                     HAGRDQQVGSLKGIASLYFNMKKLDMAKQYHQKVAQLDPNDPETYYSIGVIDWTEAYQ
                     PRMEERAKLGLKPDEPLSAKDKEQKKVCAALKEKNWQTIQDGIDNLNKALQLRPDYDD
                     AMAYMNLMYREKADVECDDPAARAADLKSADDWVDKTMATKKEKAAKQPGATGIVADQ
                     PANK"
     gene            1210..1857
                     /locus_tag="VE783_10020"
     CDS             1210..1857
                     /locus_tag="VE783_10020"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024629.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 39 protein"
                     /protein_id="HYX53774.1"
                     /translation="MALYYVLLRFWSHINAGVFFLRLLSVLPAVATVPVLYLLGKRLF
                     STRAALFSALLFSLNTFHVYYSQAPRGYSLAVFLVTAVLPLLHQIYFIRTLENPTGTN
                     TIVYVIASTAAMYGHFFASFVLVAQFVALALRGSATRVVHSPHPLINLCRSGLHPVIH
                     LCCGSSNGANFKGAANHRQRDLPLLYLYERQWPEVWLVGNCACDCRTRMVAQSPT"
     gene            complement(2233..>2743)
                     /locus_tag="VE783_10025"
     CDS             complement(2233..>2743)
                     /locus_tag="VE783_10025"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53775.1"
                     /translation="VPALILLAAQGAVALSRLWPAGLYLSAMLLVWTFAASIYATHAY
                     VTASACADWKPATQLVLAHFQPEDAICFAGTGAEPFLYYMREEKHMPWGALPNVHYSQ
                     GARCFGAAPENVAKASSPYRRAWLLKTDATREQYAWISRLLSARFGPASSQGSFGCPP
                     GKIGVELLP"
BASE COUNT          594 a          809 c          728 g          612 t
ORIGIN      
        1 gcaaggggga atcataatca atgaataaca agctaaagac gctcgtgatc gcggcagcgg
       61 cgctggccat cctgtcgggt gcaggatgca gcaagctgcg cgctcgcgat cagctcaaca
      121 agggcgtgca ggcctacaag aacgcgaaat acgaagaggc cattaaccac tttcaacagg
      181 cggtggactt cgatcctaca ctgctgaacg cccgccttta tctggccacc gcgtacgccc
      241 agcaatacat acccggcgcc gatactccgg acaataatcg catggccgaa gaggctatcg
      301 accagttcaa gaaagttctc gatatgcatg ccggtcgtga ccagcaagtg ggcagcctca
      361 agggcattgc ctcgctctac ttcaatatga agaagctgga catggccaag cagtaccacc
      421 agaaggtggc gcaactcgat cctaacgatc cagagaccta ttactcgata ggcgtcatcg
      481 actggacgga ggcctaccag ccgcgcatgg aagaacgcgc caagctgggc ctcaaaccgg
      541 acgagcctct cagcgcgaaa gacaaagaac agaagaaagt ctgcgctgct ctgaaagaga
      601 agaactggca gacgatccag gacggtatcg ataacctcaa caaggcgctg cagctgcgtc
      661 ccgactacga cgatgccatg gcgtacatga atctcatgta ccgcgaaaaa gccgatgtcg
      721 agtgtgatga cccggctgcc cgcgccgccg atctgaaatc cgccgacgac tgggttgata
      781 aaaccatggc gaccaagaaa gaaaaggccg ccaagcagcc cggggccaca ggcatcgtgg
      841 ccgatcaacc ggccaacaag tagggcacca taagtgagct cgaagcctcg ctccaccgag
      901 cgaggctttt tatttcccag cacattcctt ccgcgctctc gcgggtttgc gatccactgc
      961 tagactttcc aggatgcagc acccccccgt tgaacaatat cgcttggctc ctggtcgcca
     1021 gcagagaacg cttctgtcgt ggcatggctg gcgagtcacg gcacttatcg gggccaccct
     1081 tgtttgcttc ctggttcgta tcattgatgg ggaagcaaaa gtgtttttgc cgatgagctt
     1141 gctagctttc gtttcgcacc gttgagctgg accgactttt ggcacctcat caaatctagc
     1201 gaagcgaata tggccctcta ttacgtgctg cttcgttttt ggagccatat caacgccggt
     1261 gtcttttttc tcaggcttct ttccgtgctt ccggccgtag ccactgttcc ggtcctctat
     1321 cttctgggga agagactgtt ttcgacacgt gccgctttgt tctcggcgct gctgttttca
     1381 ttgaacacat tccatgttta ttactcgcag gcccctcgtg gctacagcct cgctgtcttt
     1441 ctggtaacgg ctgtcctgcc tttacttcat cagatttact tcatcagaac ccttgaaaat
     1501 cctacaggga caaacacgat cgtctacgta atcgcgtcta cggcagcaat gtacggccac
     1561 ttctttgcaa gctttgtgct agtcgctcaa ttcgtcgccc tcgctctgcg aggctcggcg
     1621 acacgtgtgg ttcattcgcc acaccctctt attaatttgt gtcgctctgg cttgcatccc
     1681 gttattcacc tttgctgcgg ttcatcgaac ggcgccaatt tcaagggggc agccaaccac
     1741 cggcaaagag atctaccact tctttactta tatgagcggc agtggcctga agtttggctt
     1801 gtcggtaatt gcgcttgcga ttgccgtacg agaatggtgg cgcagagccc gacttgaaag
     1861 cctgccgacg ctgccgttcc ttttcttgag cctttggttt ctgctaccgc ttggactcac
     1921 actgctgata tccctgtgga agccagtgtt cagcccgcgt tttctgatga tttgcttgcc
     1981 ggcgtttgtg cttctcgtag cggaaggggt aacggctgtt acccgacgat gggcgcgcta
     2041 ttcaggattt ctccgtcgga atctacgcat ctttggctgc ttctctgcca tgcggccccg
     2101 tcggagacag aggacaccgc cagcctgaag cggcaatttc gtgttgctcg ctgatgaaca
     2161 tttcaacgga atcgaagtaa tcgaatttgc gcctcaaaca ccagcgaaga cgccctgaaa
     2221 ctcatggcgt ttttacggca gtaattcgac cccgatcttc cccggcggac agccgaacga
     2281 tccctgtgac gacgccggac cgaagcgggc gcttagcagg cgtgaaatcc aggcatactg
     2341 ttcccgggtg gcgtccgtct tgagcaacca ggcgcgccgg tatgggctgc tggccttcgc
     2401 tacgttctcc ggtgcagcgc cgaagcatcg tgcgccctgg ctgtaatgca cgttcggcaa
     2461 tgcgccccat ggcatgtgct tttcttctcg catgtagtac aagaagggct ccgccccggt
     2521 accggcaaaa cagatcgcat cctccggttg aaaatgcgcc aacaccagct gagtcgcggg
     2581 tttccaatca gcacacgccg aggcggtcac atacgcatgg gtggcgtaga tcgacgctgc
     2641 gaaagtccac accagcagca tcgccgatag gtacagcccc gccggccata agcgacttag
     2701 agccacggct ccctgcgctg caagcaagat caacgcggga acg
//
LOCUS       DASQYP010000312        11682 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_159901, whole genome shotgun sequence.
ACCESSION   DASQYP010000312 DASQYP010000000
VERSION     DASQYP010000312.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 11682)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11682)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11682
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_159901"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1417
                     /locus_tag="VE783_10030"
     CDS             <1..1417
                     /locus_tag="VE783_10030"
                     /inference="COORDINATES: protein motif:HMM:NF012801.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015267 - channel activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HYX53776.1"
                     /translation="LPQPALCTAGTPAQQNSAIVTSFTQAFGNQNYNIKEALWDVFVQ
                     DNWKLRPDLTLDLGLRYEGQTFTGDTNNLGPRLGFAWMVPHMRSTVLRGGYGIYYSEE
                     RTDLAAADILGGASGPISFTVRPGQPGFPTSFSPILNFPPGTVFPARDITVRPGQCGQ
                     LNQILNVSALRFCPDALLNPYTQQWTFGMEHQFATTWVFSMDYVGQHTIRIERPVDLN
                     APAPFLPASTGAIRGGGSNLNNAANLADASRPIVPVPGGFRRVITNANLGSCTYNALQ
                     LRLNKRLSSHLSLLLGYTWSHSIGTVDQDAAQQDPLDSNLLGSVEKASTIFDQRHRAT
                     LSGTYQLPWNMMFSTFAQLGSGFPYNITTGVDNNGDGSTSDRPFINGSLLPRNAGQGT
                     PIYDVATSLQKTFSLGERSKVSLRAEAFNIFNHQNIYSRNGVFGNDPAGKPLLTFATP
                     AAGIANVGQPRELQFLARITF"
     gene            1427..1858
                     /locus_tag="VE783_10035"
     CDS             1427..1858
                     /locus_tag="VE783_10035"
                     /inference="COORDINATES: protein motif:HMM:NF015898.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0045892 - negative regulation of
                     DNA-templated transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="BlaI/MecI/CopY family transcriptional regulator"
                     /protein_id="HYX53777.1"
                     /translation="MIMWLKKDFAGKRASLEQLGALETEIMERIWRRGEVAVRDLHED
                     LSDRLAYTTIMTTLDRLYKKGLLNRRKQGKAFFYRAALSEREYREQVAQHLFGMALSG
                     AGDSQIVLSRFVDAVTQTDRQMLEQLDELVKAKRRALRRTE"
     gene            1863..2837
                     /locus_tag="VE783_10040"
     CDS             1863..2837
                     /locus_tag="VE783_10040"
                     /inference="COORDINATES: protein motif:HMM:NF017390.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M56 family metallopeptidase"
                     /protein_id="HYX53778.1"
                     /translation="MFYLLCLTLCLAVMVLVTTGTLLLSVPLARLLRPVLLRLPSGAA
                     SNLGLAFRIFPFLVGAVASAGLALPAFFEFEPRSTHEMLDWPLLSLAVLAALALITLF
                     VRAWRLLYSTRKWLIEQRQSAQPLGVKGAAELYCVSNATSLLAVAGVFRPAVFVSANV
                     AEALTPDELDAAIRHELAHVHSWDNVKQFVLKVIRLPRWIKPLHELDHAWIQSSEIAA
                     DERALATGAPPLELSSALIKVARLAAGQSGYQTVAASHLVPCECNSATATRAARLREI
                     LESGKVPRTQENPALRLLGAVLAGSAIYLVCLATLLPAVHEVLEILVR"
     gene            2827..5688
                     /locus_tag="VE783_10045"
     CDS             2827..5688
                     /locus_tag="VE783_10045"
                     /inference="COORDINATES: protein motif:HMM:NF025006.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxypeptidase regulatory-like
                     domain-containing protein"
                     /protein_id="HYX53779.1"
                     /translation="MSAKRLFAALILALHVLFLCSGSSAQSTAANATLNGVAVDPQGH
                     PVPRATISIKSADFSSVRTVISNSDGHFTAPFLPSGAYLVQAQAPGFEMKKPLRITLS
                     GGGSITVNLQLSVASRTEQVTVSGKGATVEGNTAAPESNLSEAQTGNSFPGLTVTYLP
                     SRNRDFMQFAQLTAGSATTESGVSIAGQRAESTEAAVDGADFNDPLLGGQRGAHDSGS
                     FFPQTVVREFQVVRSGTEAEVGRTNAGFINIVTKEGSTKYRGEFFYIGRLSALSSPDA
                     FGHSLNNAQNQFGGSVGGPIRKDKAFFYAGAEQDYLNVPWWTQFAPSSDLALLAPHIQ
                     STQKQNIEESSPIALFGRADLLLTARNTLNLQANFNRIHASELSEGSTRELAPAGHSS
                     DLSGRSYWLRGSLTTLLHGGAVNQLLAQWARDSRGYSPNDLSPELVISGVAVLGGSSL
                     LPAHSNSQRLQFGDDLALTWRSGLLHIGGQLAYDPFLSQREPFLNARFDFNSISAFNV
                     GVPHRYRQTFITGDPVFRGSERQFGLYASFKFNPVKSLAITAGMRWDAQWNPQPPNPN
                     FALAGTQSVPGDFGQLQPRLGLAWNAEKGLVIRASTGLFDAPTPAITFQRAFTDNGVN
                     AITVDSYFDPELLPLVATGGFHALSTLPVVRNMQTASAFDVDRNFLNPRSFQTSGSAE
                     KQFGSRATLNIGYIHGSTWRLPIEIDHNLFPATVSSTGLPVFPAIRPNPDFGQIFDIV
                     SSAHSSYDAMLLTSTWQLSRRTQVTANYTLSRTRDNQADLGPFSEPLVLNPFDLHGER
                     GYSVLDARHNFNVNAIVNLPWGLKCNPAMLVHSGLPYTAIVGFDQQNDANDMNDRVLL
                     PEGVAPRNIFRQPAFVNLDLRLVKDFTLKGEGHHLDLFMDIFNLTRATNRNFGPDAVS
                     VSGNPAFPVASAGQPLFAPDTTRFGSARQVQFTARLVAF"
     gene            5746..8346
                     /locus_tag="VE783_10050"
     CDS             5746..8346
                     /locus_tag="VE783_10050"
                     /inference="COORDINATES: protein motif:HMM:NF024180.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CHAT domain-containing tetratricopeptide repeat
                     protein"
                     /protein_id="HYX53780.1"
                     /translation="MPRLPLTLLFRAILLLCLLAPLARSQSSAVADAQVRLQRARTLA
                     DAGKSDEARKIYEPLAAELRGRGPSLELADTLSGLTDLANLAGDYDKALAISREAVEV
                     CRKLNDPACEARARNDVGLAESNSGNYSAAASDLESALALSRQGNQASTAVMVLNNLG
                     NVFYYQARYSEALRSYESAASDIEKHSSEYWTISWRPVTRVNLATLYQRVGNDRRALE
                     IYIQASNDPVGLSYREIAHLLANIGILYRRLGDAENALKNYHDAERWYAKQQDVDGEI
                     GVLKNIGIVLALDEGKLKDALPTFDKALQLATKTGNQREAMQAQLYRGETLYRLDRLP
                     DATRAFASALSSATQLGTVEEQWKAIYALGRIAERNGDLTGAEDKYRAAISKIESLRS
                     KLQLNRLKSDFLADKRDVYDALIKLLLGRNDAAGLFEFMERSRSRSFQDRFFAGKVDP
                     GSLSLASIRNRLPHQTAMVEFWTGPDAVAAVWVTREGQGIAQKHFSPRELEGFQQSVS
                     GLPDNLGSDWRSAFDRISAWVPSGIAPLGDSRYRHLLIVPDGFLSMFPFELMPISGGP
                     VIELHDVTYMPSAVLLLRGAVPRNVGLGWPWQSQLVAFGDPTVVGKGESSLVASVREG
                     GPGSLGALPNSRVEIKGIAKMTAGEAKLFLGNQDQKTHFFNVSRSRASILHVSTHAVA
                     DMDNPERSRLLFSPDAAGQPNNFLFLKELYDESLDLRGVSLATLSACDTERGKLVPGE
                     GVQAFSRALLAAGSRSSLTTLWRVPDQPTSEFMQEFYYHLLKEHTSKAEALRLTKLEF
                     LRSKGELSHPKYWAAFVLNGDGNAPVPRFVPWQLLLLPILLLVAIGIIAWQLRARVWS
                     KKEVARPVSV"
     gene            complement(8368..9096)
                     /locus_tag="VE783_10055"
     CDS             complement(8368..9096)
                     /locus_tag="VE783_10055"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53781.1"
                     /translation="MAGNNKNSKIWQDAVSVTNDCPGVEVLEKVMEGAPADPKAQQHV
                     VTCPHCQAEIALLRNFLTAEPAEGEGAAVSWIAAQLAKNQQPAPAQKSAPVIPFWRSM
                     FRLPYMAAAAALFVALGLGISLYINQDGGKPSINHEIGIGPYRGDIHLSGEFTEAPEH
                     LSWDAVKGATSYVVEVTEVDIDHTLVWKGQSSENSITVTPELKAKMRPGKPLDWKVTA
                     LDASGTELAHGQGRFSVRKPSSPK"
     gene            complement(9120..9899)
                     /locus_tag="VE783_10060"
     CDS             complement(9120..9899)
                     /locus_tag="VE783_10060"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor"
                     /protein_id="HYX53782.1"
                     /translation="MAAQTTTVPNMYSVGADSCPDRSNSHAGSVASLHPGERALLPAR
                     NGAASPETRKQASIAIIPGMRWDELSDEALIARYRDEADKQLGEQYLNELFRRHHVKV
                     ARWCMGFTGDRESAADLAQEICTKAYQNLPYFKGQSKFSTWLFSIARNHSLNFIRSRN
                     AAPQMHDDETVFDTLPDLASDSPLKSVERKQLTDIARQIVNEELDETEKQVFTLHFAE
                     EMPLDAITRSLKLTNQSGAKAYLVSAKRKLDRAVKRWNAKA"
     gene            10134..10550
                     /locus_tag="VE783_10065"
     CDS             10134..10550
                     /locus_tag="VE783_10065"
                     /EC_number="3.5.4.5"
                     /inference="COORDINATES: protein motif:HMM:NF004064.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004126 - cytidine deaminase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0009972 - cytidine deamination [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytidine deaminase"
                     /protein_id="HYX53783.1"
                     /translation="MPANQLPEADLNRLLEAARATLGRAHAPYSKFRVGAAVLTDAGE
                     IFTGVNVENASYGLTNCAERSAIFTAVRESRSANLKLCAVAVVTADDVPCSPCGACRQ
                     VISEFGGDDCRVIFKSAEGYLEMSIKDLLPFSFRLS"
     gene            10587..>11682
                     /locus_tag="VE783_10070"
     CDS             10587..>11682
                     /locus_tag="VE783_10070"
                     /EC_number="2.4.2.4"
                     /inference="COORDINATES: protein motif:HMM:NF004490.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006206 - pyrimidine nucleobase metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thymidine phosphorylase"
                     /protein_id="HYX53784.1"
                     /translation="MHVTDLIRRKRDGGELSRAEIEFLVNGCTRGDIPDYQISAWLMA
                     VVLRGMTRAELAALTESMLNSGKVIDFTDLPAAKVDKHSTGGVGDKTSLILAPVVAAA
                     GLYVPMISGRGLGHTGGTLDKLESIPGFNVNLSTAEFRRVLSQCGAAMIGQTAEIAPA
                     DKKLYALRDVTGTVESPYLICASIMSKKLAEGIDALALDVKTGSGAFMKAEKDAAFLA
                     ELMVETGQRLGKRVVALITDMNQPLGKAVGNALEVIECFEVLEGKGPADVRELCSILA
                     GWMLALGGKAANLEAGRKVADEMIRSGKAREKFAEMIRLHGGNPAVMDKHELLPRAQH
                     TAEITSKDPGYVTAIMCEQIGTASVLLGGGR"
BASE COUNT         2344 a         3411 c         3296 g         2631 t
ORIGIN      
        1 attgccgcaa cccgcgttat gcaccgcagg cacaccggcc cagcagaatt cggccatcgt
       61 caccagcttc acgcaggcat tcgggaacca gaactacaac atcaaagagg cgctttggga
      121 cgtttttgtg caggacaatt ggaagctccg gccagatctg acgctggatc ttggcttgcg
      181 ctatgaaggc cagacattta ccggcgatac caacaacctt ggcccgcggc tcggctttgc
      241 ctggatggtg ccgcacatgc gctcgaccgt gctgcgtgga ggatatggaa tctactattc
      301 cgaggagcgc acggaccttg ccgctgccga cattcttggc ggcgcctccg ggccgatcag
      361 tttcaccgtt cgccccgggc agcctggctt tcccacgtcg ttcagtccca ttctgaactt
      421 tcctccggga acggtttttc cggcgcgcga tatcacggtc cgtcccgggc agtgcggtca
      481 gctcaaccag attctcaacg tctcagcgct gcgcttctgt cctgacgcgc tgctgaaccc
      541 ctatacccag cagtggacgt tcggcatgga gcaccagttc gcgacaacat gggtcttctc
      601 catggattat gtcggccaac acaccatccg cattgagcgt ccagtcgatc taaatgctcc
      661 ggcgccgttc ctgccggctt caaccggagc gattcgcggc ggcggaagca acctcaacaa
      721 tgcggctaac ctcgccgatg cgagccgtcc gattgtcccg gttcccggtg ggttcaggcg
      781 ggtaataacg aacgccaacc tcggctcatg cacctacaat gcgcttcagc ttcgcttgaa
      841 taagcgtctg tccagccact tgagcctctt gctgggctac acatggtcgc actccatagg
      901 aactgtggac caggatgccg cgcaacagga tccgctcgat tcgaacctgc tcggttccgt
      961 cgagaaggcg tccaccatct tcgatcagcg gcatcgagcc acactcagcg gaacctacca
     1021 gcttccatgg aacatgatgt tcagcacctt cgcgcagctt ggatcgggct tcccgtacaa
     1081 catcaccacc ggagtggaca ataacggcga tggctcaact tctgatcgtc cgtttatcaa
     1141 tgggagtttg ctgccgcgca acgcagggca gggcacgcct atctatgacg tggccaccag
     1201 cctgcaaaag acgttttctt taggcgagcg gagcaaggtg agcctccgcg ccgaggcgtt
     1261 caatattttc aatcaccaga acatttacag ccgaaacggc gtgttcggga acgatcccgc
     1321 ggggaagccg ctgctcacgt ttgccacgcc ggcagcagga atcgccaatg tgggccagcc
     1381 gcgggaatta cagttcctgg cccgtattac cttctgataa agtgtgatga tcatgtggct
     1441 gaagaaagat ttcgccggaa aacgggcctc gctggagcag ctgggcgctc tggaaaccga
     1501 gatcatggag cgcatctgga ggcgcggtga agtcgcggtg cgtgacctcc atgaagatct
     1561 ctccgatcgg ctggcgtaca ccaccatcat gaccactctt gatcgcctgt ataaaaaagg
     1621 actgctcaac cgccgcaagc aagggaaggc gttcttttac cgggcagcgc tcagcgagcg
     1681 cgaataccgt gagcaggtgg cgcagcatct ttttggcatg gcattgagcg gcgctggtga
     1741 tagccagatt gtgctctccc gctttgttga tgccgtaacc caaaccgatc gccagatgct
     1801 ggagcagctg gatgaactgg tgaaggccaa gcggcgggcg ctgcgccgca cggaatagcc
     1861 acatgtttta ccttttgtgc ctgacacttt gtctcgctgt gatggtcctg gtgaccacag
     1921 gtacgcttct gttgtctgtt ccgttggccc gcctgctccg ccctgttttg ctgcgccttc
     1981 cgtccggtgc cgcctccaac ctgggccttg cgttccgcat atttccgttt ctggtgggag
     2041 ccgtggcaag tgcaggactc gccctgccgg cattctttga attcgaacct cgcagcacgc
     2101 atgagatgct ggattggccg ttgctttcgc tggctgtgct cgcggcactc gccttgatta
     2161 cacttttcgt gcgtgcatgg cgcctgctgt attccactcg gaagtggctg atcgaacaaa
     2221 ggcaatcagc gcagcccctc ggcgtcaagg gagcggctga actgtattgc gtaagcaatg
     2281 cgacctctct gctggccgtt gccggagtgt tccggcctgc agtctttgtc agcgccaatg
     2341 tggctgaagc tctaacgcca gacgaactgg atgcagctat ccgccacgaa ctcgcacatg
     2401 tccactcctg ggacaacgta aagcagttcg ttctcaaggt gattcgcctg ccgcgctgga
     2461 tcaaaccgct tcacgagctg gatcatgcat ggattcagtc gtcagaaatt gctgcggatg
     2521 aaagggccct tgctactggc gccccgccgc tggaactttc ttctgcgttg atcaaggttg
     2581 cacgtctcgc ggcaggccag agcggttatc agactgtcgc tgcatcacat ctggttccct
     2641 gtgagtgcaa ctcagccacg gctacccgcg ctgcgcggct tcgcgagatt ctggaatcag
     2701 gcaaggttcc ccgtactcaa gaaaatccag ccctgcgctt gctgggtgca gtgctggcag
     2761 gctctgcaat ctacctcgtc tgtcttgcca cgctgctgcc ggccgtgcat gaagtgctgg
     2821 aaatccttgt ccgctaaacg gctttttgca gctctcattc tggctttaca tgttttgttt
     2881 ctttgttctg gatcaagtgc ccaatctacc gcggcgaatg caactctaaa tggcgttgct
     2941 gttgacccgc agggacatcc tgttccacgc gcaaccatca gcatcaagag cgccgatttt
     3001 tcctccgtac ggactgtgat ctccaacagt gatggacatt ttactgcgcc cttcctgccc
     3061 agtggggcat atctggtcca ggcccaggct cctggcttcg aaatgaagaa gccgctgcgc
     3121 ataactttga gcgggggcgg aagcatcact gttaacctgc agctttcggt tgcaagcagg
     3181 acggagcagg tcacggtcag cggaaaaggc gccactgtag aaggcaatac cgccgctccc
     3241 gaatcaaacc ttagtgaagc gcaaacaggg aactcatttc ccggattgac cgttacctac
     3301 ctgcccagcc gcaaccgtga ttttatgcag tttgctcagc tcaccgccgg cagtgcgaca
     3361 acggaatccg gagtttccat agccggccag cgcgccgaat caacagaagc tgcggtggat
     3421 ggtgctgatt tcaatgatcc gctcctcggc ggccagcgtg gagcccacga cagcggatca
     3481 ttttttccgc agacggtggt gcgtgagttt caggtagttc gttcgggaac tgaggcagag
     3541 gtgggccgaa ccaacgctgg atttatcaat atcgtcacaa aagaaggcag caccaaatat
     3601 cgaggcgagt ttttttacat tgggcggctt tccgctttga gctcgccgga tgctttcggg
     3661 cactcgctga acaacgcgca gaaccagttt ggtggctccg tgggcggacc gatccgcaaa
     3721 gacaaggctt tcttctacgc cggggctgag caggactatc tcaatgtgcc ctggtggacg
     3781 cagtttgccc cgtcgtccga tctcgcgttg ctggctcccc acattcaatc tacgcaaaag
     3841 cagaacattg aagagagttc tcccatagct ctctttggcc gtgcggatct tttgctcacg
     3901 gccaggaata ctttgaacct gcaggccaac ttcaatcgta ttcatgcctc agagctgagc
     3961 gaaggaagca cgcgcgagct tgctcctgcc ggccacagtt cggatctctc tggtcgaagt
     4021 tattggttgc gcggctcgct caccacgctc ttgcatggcg gggccgtgaa tcagctgctc
     4081 gcgcaatggg cacgggatag ccggggctac agtccgaacg atctttcacc ggaattggta
     4141 atcagtggcg ttgctgtgct gggcggaagc agcttgctcc cagctcactc caactcgcag
     4201 cgccttcagt tcggtgatga tctcgccctt acctggcgca gcggccttct tcacatcggc
     4261 ggccaactcg cctacgatcc gtttctaagt cagcgcgagc catttctgaa cgcacgcttt
     4321 gacttcaact ccatttccgc gttcaacgtc ggtgttccgc accgctatcg ccaaaccttt
     4381 atcaccggcg atcctgtctt ccgcgggagc gagcggcagt tcggtttgta tgcttcattc
     4441 aagttcaacc ctgtcaaatc cctggccatc acggcgggaa tgcgctggga tgcgcaatgg
     4501 aacccgcagc cgccaaatcc caactttgcg cttgcaggaa cgcaatcggt tcccggcgac
     4561 tttggccaat tacagccgcg actgggcctc gcctggaacg cggagaaggg acttgtaatc
     4621 agggcctcaa cgggattgtt cgatgctcca acaccggcta ttaccttcca gcgcgctttt
     4681 acggataacg gagtaaatgc cattaccgtg gatagctatt tcgacccgga gctgctgccg
     4741 ctcgtcgcga caggtggatt tcacgcgctc agcacccttc cggtagttcg gaacatgcaa
     4801 acagccagcg cttttgacgt ggatcggaat ttcctgaacc ccagatcatt tcagacctcc
     4861 ggcagcgcag aaaagcagtt cggatcaaga gcgacattga acatcggata cattcacggt
     4921 tccacttggc gtctgcctat agagatcgat cacaatcttt ttccggcgac ggtaagttca
     4981 accgggcttc cggtttttcc cgcgatccgt cccaatcccg actttgggca gatcttcgat
     5041 atcgtctcga gcgcgcactc cagttacgat gcgatgctcc ttacctcaac ctggcagctc
     5101 tcgcggcgaa cgcaagtcac tgccaattac acgctctcac gcacgcgcga caaccaggct
     5161 gacctgggac ctttttcgga gccactcgtc ctcaacccgt ttgatctgca tggagagcgt
     5221 ggttactccg tgctggacgc gcgccacaac ttcaacgtga acgccattgt gaatctgcca
     5281 tggggtctca agtgcaatcc ggcgatgctc gtccactccg gactgccata tacagcaatt
     5341 gtgggatttg atcagcagaa cgacgcgaac gacatgaatg atcgagttct cctgcccgag
     5401 ggcgttgcac cgcgcaacat ctttcgccag cccgcattcg tcaatctcga cctgaggctg
     5461 gttaaggact tcactctcaa aggcgagggc catcatctcg atttgttcat ggacatcttc
     5521 aatctcaccc gcgccacaaa ccgcaacttt ggtcccgacg cagtaagcgt atctggtaac
     5581 ccggcatttc cagtcgccag cgccgggcag ccactctttg cgccggatac tacacggttt
     5641 ggcagcgcgc gccaggtgca gttcactgcg cggctggttg cattctaagg gcacagagct
     5701 gcaaatgcgc tagcaacctc tttatacttg cagtgacaga gttgcatgcc ccggcttccg
     5761 cttacgcttc tattccgagc gattcttctg ctgtgcctgc tcgcgccact cgcgcgctcc
     5821 cagagcagcg ctgtggcaga cgcgcaggta cgtttgcaaa gggcccggac acttgccgat
     5881 gccggaaagt ctgacgaggc acggaagatc tacgagccgc ttgcggctga gttgcgcggg
     5941 cgcggcccca gcctggaact tgccgacacg ctcagcggac tgactgatct ggccaatctc
     6001 gccggcgact atgacaaagc actcgctatt tcgcgagaag cggtggaggt ctgccgcaag
     6061 ttgaacgatc ctgcgtgcga agcgcgtgca cgcaatgatg ttgggctggc ggaatccaat
     6121 tccggcaact atagcgcagc tgcgtccgat cttgaatctg ctcttgcgct cagcaggcag
     6181 ggcaaccagg cgtccaccgc ggtaatggtc ctgaacaatc tgggaaacgt cttctattac
     6241 caggcacggt actccgaggc gcttcgcagt tacgaatctg ctgcttctga catcgagaag
     6301 cattcttcag agtattggac gatctcctgg cgacccgtta cgcgtgtgaa tctggccacc
     6361 ctttaccagc gagtcggcaa tgaccggcgt gcactggaga tttacattca agcgtccaat
     6421 gacccggtcg gcctctcata tcgcgaaatt gctcatcttc ttgccaatat tggcattctt
     6481 taccgcaggc tgggtgatgc tgagaatgcg cttaagaact atcacgatgc cgaaaggtgg
     6541 tacgcaaagc agcaggacgt tgatggcgaa atcggcgttc tgaagaatat tggcatcgtc
     6601 ctcgcgcttg acgaaggcaa actgaaggac gcactgccca ccttcgataa ggcacttcag
     6661 cttgctacaa agaccggcaa ccagcgcgaa gccatgcagg cgcaactcta tcgtggtgaa
     6721 actctctacc gtctggatcg tctgcccgac gcgaccaggg catttgcaag cgcgctttca
     6781 tcggccactc aactaggtac ggtggaagaa cagtggaagg caatttatgc cttaggccgc
     6841 atagctgagc ggaacggtga tctcacggga gccgaagaca aataccgcgc cgcgatcagc
     6901 aaaatagaaa gcctccgctc caaactccag ctgaaccggc tgaagtccga ttttctggcc
     6961 gacaagcgtg atgtctacga cgccctgatc aagcttcttc tgggcaggaa tgatgctgcg
     7021 ggcctgtttg aattcatgga gcgcagccgc tcgcggtcct tccaggacag attttttgcc
     7081 ggcaaagtcg atcccggttc cctgagcctg gcttcgattc gcaaccgcct gccgcaccag
     7141 acagcaatgg tggagttttg gaccggcccc gatgcggtgg cggcagtgtg ggtcacgcgc
     7201 gaagggcagg gaatagcgca aaagcatttt tcgccgcggg agctcgaggg ttttcagcaa
     7261 tcggtctctg ggctgccgga caatctcgga agcgactggc ggtcagcctt cgacagaata
     7321 agcgcatggg tgccttctgg catcgcaccc ctgggcgatt cacgctatcg gcatctcctg
     7381 atcgtgcccg atgggtttct cagtatgttt ccgtttgaat taatgccaat ttccggcggc
     7441 ccggttattg aacttcacga tgttacctac atgccgagtg cagtcctgct tttgcgtggc
     7501 gcagttccgc ggaatgtcgg cctcgggtgg ccgtggcagt ctcaactcgt tgctttcggc
     7561 gatcccaccg ttgtgggaaa gggtgagagt tctctcgtcg cttcggtgcg agaaggtggc
     7621 ccaggatcac tgggagcact gccgaattcg cgcgttgaga tcaagggcat cgcgaagatg
     7681 actgcaggag aggcaaaatt gtttctcggc aatcaagatc aaaaaacgca cttcttcaat
     7741 gtgtctcgct cgcgtgcctc catccttcac gtgagcaccc atgcggttgc agacatggat
     7801 aatcctgaac gctcacgtct gctcttttct cctgacgcag ccggtcagcc taataatttc
     7861 ctgtttctga aagagctcta tgatgaaagc cttgatcttc gtggtgtgag tctggctacc
     7921 ctctctgcgt gcgatacgga aagagggaag ctggttcccg gcgaaggtgt gcaggcattc
     7981 agcagggcat tgctggctgc cggatcaaga tcatccctca caactttgtg gcgcgtccca
     8041 gaccagccaa cctcagagtt catgcaggaa ttctattatc acttgctgaa ggagcacacc
     8101 agcaaagctg aggcgctgcg gctgacaaag cttgaattcc tgcgatctaa aggtgagtta
     8161 agccacccaa aatactgggc cgctttcgtc ctcaacggag acgggaatgc gccggtgccg
     8221 cgctttgttc cctggcaact gctgctctta cccatccttc tgctggttgc gattggaatc
     8281 atcgcgtggc agttgcgtgc ccgggtctgg tcgaagaagg aagtggcgcg tccggtcagc
     8341 gtctgactcc tcgcttaacg cacatggcta ttttggtgat gagggcttcc ttacgctgaa
     8401 acggccctgg ccgtgagcca gctctgtccc ggaggcatca agtgcggtaa ctttccagtc
     8461 caggggcttg cccggccgca ttttggcctt cagttccgga gtaacagtaa ttgagttttc
     8521 gctcgactgg cctttccaca ccagtgtgtg atcaatgtcc acttctgtaa cttccactac
     8581 atagctggtt gcgcctttca ctgcgtccca gctcagatgc tcgggagctt cagtgaactc
     8641 accactcaga tggatgtcgc cacggtatgg cccaattccg atctcatgat taatagaggg
     8701 cttcccgcca tcctggttga tatagagcga aattcccaat cccagagcca cgaacagggc
     8761 cgctgccgct gccatatacg gcaggcggaa catgctgcgc cagaagggga tcaccggagc
     8821 ggacttctga gccggggcag gctgctggtt ttttgccagt tgagcggcga tccacgatac
     8881 tgcagcgcct tcaccttccg ccggttcggc ggtcaaaaaa ttcctgagca gggcgatctc
     8941 tgcctggcag tgcgggcagg tgaccacgtg ctgctgtgct ttcgggtccg cgggcgcgcc
     9001 ttccatcacc ttttccagga cttccactcc cggacagtca ttggtaacag atactgcgtc
     9061 ctgccagatc ttcgagtttt tgttgttgcc ggccatgatt attctccccg tgcgtccgct
     9121 tacgcttttg cgttccagcg ctttacagcc cggtccagct tccgttttgc gcttaccagg
     9181 taggcctttg cgccgctctg gttcgtcagt ttcagtgacc gggtaattgc atccagcggc
     9241 atttcttccg cgaaatgcag agtgaaaacc tgtttttccg tctcatccag ctcttcattc
     9301 acgatttggc gcgcgatgtc agtgagctgc ttgcgttcta cgcttttcag tgggctgtct
     9361 gacgcaaggt ccggaagtgt atcgaatacc gtctcgtcat cgtgcatctg cggcgctgca
     9421 ttgcgggacc ggatgaagtt gagcgagtgg ttccgggcaa tggaaaatag ccaggtcgaa
     9481 aacttcgatt gccctttgaa gtacggaagg ttctggtaag ccttggtgca gatttcctgg
     9541 gccaggtcgg cggccgactc gcggtctccg gtaaagccca tgcaccagcg ggccactttc
     9601 acgtggtggc gccggaacag ctcgttcagg tattgctcgc cgagctgctt gtcggcctcg
     9661 tcgcggtacc tcgcgataag tgcctcatcc gaaagctcat cccagcgcat gcccgggatt
     9721 atagcaatcg aagcttgctt ccgagtttcc ggtgaagcgg cgccattgcg tgccggcaac
     9781 agcgcccgct caccagggtg gagacttgcc acagaaccag catgactgtt cgagcggtcc
     9841 gggcatgaat ccgccccaac gctgtacatg ttcggaactg tggtagtctg cgcagccacg
     9901 tcgttaattt cctccgtaca tgaactgaga caccctgaac cgagcagcag aacaggtttt
     9961 tctgatttcg ccagccagtc cttatatatg tgtgcgggtc cggcctgtgc ccggcggcca
    10021 gggcgggctt atgcctcgtg ttttcaataa ctcacaggtc tatgcagctc tgggccgcaa
    10081 aatgtggttc agcggagacg tgataaggta gagcttctca aaggaagctg ttcatgccgg
    10141 ctaatcaact cccggaagcc gatctcaatc gcctgcttga ggctgcccgt gctacgctgg
    10201 gtcgcgctca cgctccatac tctaagttcc gcgtgggagc cgccgtcctc acagacgcag
    10261 gcgaaatctt cacgggagtg aacgtggaga acgcttcata tggccttacg aattgcgccg
    10321 agcgctccgc catctttacc gcagtacgtg agagcaggtc tgcgaatttg aagctgtgcg
    10381 cggtggcggt ggtcacggcc gatgacgtgc cgtgttcgcc ctgcggggca tgccgccagg
    10441 taatctctga attcggcggc gacgattgcc gcgttatttt caaaagcgcg gagggttatc
    10501 tggaaatgtc catcaaggat ttactgcctt tcagcttccg gctatcctga gctgggttca
    10561 aataagctgg gttgaaataa gcgaagatgc atgtcacaga cctgatccgg cgcaagcgag
    10621 atggcggcga actctcgcgc gccgaaatcg agtttctggt caacggctgc actcgcggcg
    10681 atatccccga ttaccagatt tccgcctggc taatggcggt cgtacttcgc ggcatgactc
    10741 gcgcggaatt ggcagccttg accgaatcca tgctgaattc cggcaaggta atcgatttca
    10801 cagatcttcc cgccgcgaaa gtggacaagc actccacggg tggtgttggc gacaagactt
    10861 cattgatcct ggcgccggta gtggctgcgg ccggcttata tgtgcccatg atttccggcc
    10921 gcggccttgg tcacaccggc ggcaccctgg ataaactgga atcaatcccc ggcttcaatg
    10981 tgaatctttc gactgctgag tttcgccggg ttctttcgca atgcggcgcg gccatgatcg
    11041 gacagactgc ggagatcgcc cccgccgata aaaagctata cgcgctacgc gatgtgactg
    11101 gcacagtcga aagtccttat ctgatctgcg cgtccatcat gagcaagaag ctggccgagg
    11161 gcattgatgc gctggcgctc gacgtgaaga ccggcagcgg ggctttcatg aaggccgaaa
    11221 aagacgcagc gtttctggct gagctgatgg tagaaacggg gcagcgcctg ggcaagcgcg
    11281 tggttgccct gatcaccgac atgaatcagc cgctggggaa ggccgtaggc aatgcccttg
    11341 aggtgatcga gtgctttgag gtgctggagg gcaaaggccc ggcagacgtg cgcgagcttt
    11401 gctccattct cgccggctgg atgctcgcgc tcgggggaaa ggccgcaaat ctcgaagcgg
    11461 gccgcaaagt ggccgacgaa atgatccgca gcggcaaggc acgggaaaaa tttgccgaga
    11521 tgatccgcct gcacggcggc aacccggccg tgatggacaa gcatgagttg ctcccacggg
    11581 cgcagcacac cgcagaaatt acgagcaaag atcccggtta cgttacggcg atcatgtgcg
    11641 agcagatcgg cacagcttct gtcctgctgg gtggtggccg gg
//
LOCUS       DASQYP010000313         6648 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_81029, whole genome shotgun sequence.
ACCESSION   DASQYP010000313 DASQYP010000000
VERSION     DASQYP010000313.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 6648)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6648)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6648
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_81029"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1174
                     /locus_tag="VE783_10075"
     CDS             <1..1174
                     /locus_tag="VE783_10075"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53785.1"
                     /translation="FPLRLQSVVMMKAATSPDLAKDAMRPKLQVPVPPRVEIPVVPRT
                     VANPELTLMPVKAVPVQPEAARAERAEPSQIAPKPDSERGPTVVDMRGTAKKSAIVLN
                     AVNVTPDPHVQIPDAQLAGSFVVGPPTKTALPALAPGSTTTIKNAGGSSATLTKGKED
                     NSPASPGHRAGGPESSPAITTETGGTGLARGPGSPAGSGKGHGSGITISTGAPGGNDA
                     GLGIAVSGTGARPGSNVAPGHTAIKRTYGLTVTAAGGSGGASRDMGVFGRSEIVYSVA
                     IPMADAGCPSDWPMQYALLNPRPRGASLLEPPVATKKVAAVAAGALAEQSTPIFVRGV
                     IDEKGKLVGLQTILVQDPRGEVAIQALEKWEFLPAILDGTPVASKVLIGVVVTAGQ"
     gene            complement(1539..2138)
                     /locus_tag="VE783_10080"
     CDS             complement(1539..2138)
                     /locus_tag="VE783_10080"
                     /inference="COORDINATES: protein motif:HMM:NF016895.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0042834 - peptidoglycan binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SPOR domain-containing protein"
                     /protein_id="HYX53786.1"
                     /translation="MDLGHGKAVLRDEDLDSPKHDTEITLSTGKLLGIFFGLVIVCSV
                     FFTMGYLLGKSTAAGSHTQIVGAITTGGTPAGKPSAGNRPPESPAPAPAQPPVSQDNP
                     QTPASTAANSGASSTAPTEIKANPAGTYTVQVAAVSKREDADILVSALSKKQYPVFVA
                     NSATDALFHVQVGPFTDPKDAEAMRVRLSGDGYNAIVKH"
     gene            complement(2169..2948)
                     /locus_tag="VE783_10085"
     CDS             complement(2169..2948)
                     /locus_tag="VE783_10085"
                     /inference="COORDINATES: protein motif:HMM:NF013324.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="slipin family protein"
                     /protein_id="HYX53787.1"
                     /translation="MSLVIGIPLAVFVLYVLNCIKILREYERGVIFRLGRLYGAKGPG
                     VILVFAPLDRMVRVDLRQQALEVPPQDIITRDNVTLKVNAVIYWEAVDAAQAVVRVQN
                     YYWQTQQFSQTTLRSVLGEVDLDELLAHRDKLNARIQSILDQHTAPYGVKVANVEIKQ
                     VDLPDTMQRAMAKQAEAEREKRAKIIHAEGEFAASQRLTDAAKMLAQEPLTLQLRYLQ
                     TLTEIGVEKNTTIVFPLPIDILNSLSAALEKYSGRNPPKQG"
     gene            complement(3024..4334)
                     /locus_tag="VE783_10090"
     CDS             complement(3024..4334)
                     /locus_tag="VE783_10090"
                     /inference="COORDINATES: protein motif:HMM:NF014062.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nodulation protein NfeD"
                     /protein_id="HYX53788.1"
                     /translation="MSKIFVVLALALAPSFAAADVVKIVVDSPIHGLAAERFERAIDR
                     AKATNADAVLVELQTPGGAMKDMEEIIHKVLESPVPVIIYVTPSGSGAASAGFFILES
                     ADIAAMAPGTNTGAAHPVLIGPTGSSEKLEPVMKEKIENYAASLLRSYVGKRGRNAEV
                     AESAVLQSKSFTAEEALSKHLVEYIAKDDADLFRQLDGKTVTRFDGAKVTLHLVGKPI
                     DVLEMTVRQKVLALLLDPNISFLLFVIGALCIYFEFNHPGAVIPGAVGFVAVVLVLYA
                     WNMLPISSIAIVLILSSFVLYILEAKFQTHGVLTTAGIVMMVIGALTLVDSPIPQMRV
                     KLATALAVSIPFGIITAFLMTLAIRARRNKIVTGPESLVGEIGVVRSPMAPAGKVFVR
                     GAIWDAIATTNMDVGQAVIVRAVQDLILRVEPAAQSVTLESAKA"
     gene            complement(4360..5943)
                     /locus_tag="VE783_10095"
     CDS             complement(4360..5943)
                     /locus_tag="VE783_10095"
                     /inference="COORDINATES: protein motif:HMM:NF024824.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HYX53789.1"
                     /translation="MSRSAAILSVLLLALAFTPLYATAQTDQSRASQILLIMPFENTS
                     SQPGVDWIGEAFPEVLSSRLSSGPLYIVSRDDRLLAFDQLGIPTSAKPSRATTYEIAQ
                     RLEADYVVMGTFRVDGGNLTARARVMDTARLRLGPELSESGSLANLISIQSALAWDVL
                     DSLKIAGKTGKQEFVARFPAVRLDALENYMRGVIAGSNPEKIKRFLEAVRLDPNQTLA
                     MLQLGKTYYATKDYISAIGWLSRIPPSDPNINEAQFYLGLSAFYGGQPDKAQAAFSSL
                     SERLPLTEIFNNLGVVSARRGDRRAREYFERAVQTEPSDPDYHFNLAVELYREGDSTG
                     ASRELRAALAIQKDSEARNFLDAIIAAGQSRPRLPLERIKRNYDESGFRQIALELENA
                     EEARFSGQDGARHSAYHIQRGHEFMEQGVNAEAEKQFREAVALTPFDALAHASLAEVL
                     AATQRYPAAREEARTSLRLKPLPEAYLVMARLALVENHTAEAQQNVDQALALDPANAS
                     ALALKKDLAARSSGAARNR"
     gene            6278..>6648
                     /locus_tag="VE783_10100"
     CDS             6278..>6648
                     /locus_tag="VE783_10100"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53790.1"
                     /translation="MATTRTNSHLVAGRPWTYISNVSVPTMTVYSPHATNTGAAVIVF
                     PGGGYQVLAIDLEGTEVCEWLTSIGITCVLLKYRVPGLALYPKSTPYPRSGPYPQSPI
                     ALEDAQRTVGLLRLNAKKWHI"
BASE COUNT         1419 a         1886 c         1976 g         1367 t
ORIGIN      
        1 atttccgcta cggctccaaa gcgtggtcat gatgaaagcg gctacctctc cggaccttgc
       61 gaaagacgcg atgcgaccga agctgcaggt tccggtgccg cccagggtcg aaataccagt
      121 tgtacccaga acagttgcca atcccgagtt gacacttatg ccggtcaaag cagttccggt
      181 gcagcctgaa gcagcgagag ccgagcgggc ggagccctcg cagatagcgc ccaagccaga
      241 tagcgaacga ggcccgaccg tggtcgatat gcgtggcacg gcgaagaagt cggcgatcgt
      301 gcttaacgcc gtgaatgtaa ccccggatcc gcacgttcaa atccctgacg ctcagctggc
      361 cggcagcttc gttgttgggc caccgactaa aaccgcgctc ccggcactcg cacccggctc
      421 taccacgacc ataaagaatg cgggtggaag cagtgctacc ctcaccaagg ggaaggaaga
      481 taattctccg gcgagccctg gtcaccgggc aggtgggccg gaaagcagcc ctgccattac
      541 aacggagacg ggcggcactg gcttggcccg cgggccaggc agtccagccg gctcgggaaa
      601 aggccacggc tccggaatca caattagtac tggcgcaccg ggcggaaatg acgcagggtt
      661 gggcatagct gtctcgggaa ctggcgcgag gcccgggagc aacgtcgctc cgggccacac
      721 tgcaatcaaa cggacctacg gtttaacggt cacagcagcc ggaggcagtg gcggagccag
      781 ccgggacatg ggagttttcg gccggtcaga aattgtctac agcgtggcga ttccgatggc
      841 ggacgcggga tgtcccagtg attggccgat gcaatacgcg ttgctcaatc cccgccctcg
      901 cggggccagt ttgctggagc cgccggttgc caccaaaaag gtagctgcgg ttgccgccgg
      961 agcgctcgcc gagcagagca cgccgatttt tgtgcgcgga gtgatcgacg agaagggcaa
     1021 actcgttggc ctgcagacaa tcctggttca ggacccgcgt ggcgaggtgg caattcaggc
     1081 cctggagaaa tgggagttcc tgccggcaat cttggatggc actccggtgg cgagcaaagt
     1141 cctgataggg gtagttgtta cagcaggcca gtagagcggc aggaaaaaat ggacagctct
     1201 taccctgctt ccattaccaa caaacttttt aatctcaaga ggagaatcaa cttgctaaat
     1261 ccaaacacaa tccttgcgct ctttgctgtg atcgaaccga tgacaatcag gatcatagcg
     1321 gggatcattt ttgtgatctg tgtattcatc atagtggcac ggcgcaagaa gatggctgca
     1381 cggcgtcgcc ggacagtcta aacgcaatct gagcagcttc ccgtcgccgt ccggctaatg
     1441 tgcgactctc gcggccgccg cttggcggag cgagggtgag ctgcgccctg cgcggatacc
     1501 tgggtactga gccggttgac cgattctaat tgcgatgctc agtgcttcac gatcgcgttg
     1561 tagccgtcgc cggagaggcg tacgcgcatg gcttccgcat cctttggatc agtaaagggg
     1621 ccaacctgta cgtggaagag agcgtcagta gcagaattgg ctacgaaaac cgggtactgc
     1681 tttttgctga gagcggagac cagaatgtcc gcgtcttcac gcttggaaac agccgccacc
     1741 tgcactgtat aagttccagc gggatttgct ttaatctcag tgggagcggt tgaactggca
     1801 ccgctgttgg ctgctgtgct agccggagtt tgcggattat cctggctcac cggaggctgc
     1861 gccggagcag gagccggact ctccggtggc ctatttccgg ccgaaggctt tcccgctgga
     1921 gtgccacctg ttgtaatggc gccgacgatt tgggtatggc ttccggcggc tgtgctcttg
     1981 cccagcaaat accccatcgt gaaaaagacg gagcacacga tcaccaggcc gaagaaaatc
     2041 cccagcagct ttcccgtgct taatgtgatt tcagtgtcgt gcttcggcga gtccaggtct
     2101 tcgtcacgca atacggcctt cccgtgtccc aggtccattt ctactccagc tctgcttttt
     2161 gccccagttt aaccctgttt ggggggattg cgcccactgt atttctccag cgcggcggaa
     2221 agggaattaa ggatgtcaat ggggagcggg aagacgatgg tcgtgttctt ttccactccg
     2281 atttcggtca aagtctgcag ataccggagc tgaagcgtga gcggctcctg tgccagcatt
     2341 ttggcggcgt cagtgaggcg ctgtgacgcg gcgaattcac cttcggcatg gataatcttg
     2401 gcacgcttct cgcgctctgc ttccgcctgc ttggccatgg cgcgctgcat ggtgtccggc
     2461 agatccacct gcttgatttc tacgttggct accttcacgc cgtaaggcgc ggtgtgctga
     2521 tcaaggatgc tctgaattcg ggcgttcagc ttatcgcggt gggccagaag ttcatcgagg
     2581 tcaacttcgc cgagcaccga gcgcagagtg gtctgcgaga actgttgcgt ttgccaataa
     2641 tagttctgga cgcgcaccac ggcctgggca gcgtcaaccg cctcccagta aatgaccgca
     2701 ttcactttta gcgtgacgtt atcacgcgtg atgatgtcct gcggcggaac ttcaagcgcc
     2761 tgctggcgga gatccacgcg caccatgcgg tcgagcggtg cgaacaccag gatcacgccc
     2821 ggcccttttg caccatacag ccggccaagg cggaaaatta caccgcgctc atattcgcgc
     2881 aggatcttaa tgcagttgag gacgtacaac acgaagacgg caagaggaat gcctattacc
     2941 aatgacacgc gtgccctcca gggtgaggca aggttcgcca gcaccggatt gtatggtatc
     3001 cggacagact cgacaaagtg aaactaggct ttggctgatt ccagcgtaac agattgcgcg
     3061 gccggctcca cgcgcaatat cagatcctgc acggcgcgca cgatcaccgc ctggcccaca
     3121 tccatattgg tggtggctat ggcgtcccag atcgcaccgc gtacgaagac cttgcccgcg
     3181 ggtgccatcg gcgaacgcac gactcctatt tcgccgacca ggctttccgg cccggtgacg
     3241 atcttattcc gccgcgcgcg aatcgccagc gtcatcagaa acgcagtgat gatgccaaaa
     3301 ggaatgctca cggccagtgc cgtggcaagt ttcacccgca tctgcgggat gggagagtca
     3361 acgagcgtga gcgcaccgat caccatcatc acaatcccgg cagtggtgag cacgccgtgc
     3421 gtctgaaact tggcttcgag tatataaagc acaaaggagg agagaatcag cacaatggcg
     3481 atggaactga ttggcagcat gttccaggca tagagcacca gaaccactgc aacaaatccc
     3541 actgcacccg ggatcaccgc accgggatga ttgaattcga aataaatgca caaggcgccg
     3601 atcacgaaca gcagaaatga gatgttgggg tcgagtaaca gcgcaagaac tttctgccgg
     3661 accgtcatct caagcacatc gattggcttg ccaacgaggt gtagggtgac cttcgcgccg
     3721 tcaaaccggg tgacagtctt tccgtcaagc tgacggaaaa ggtcggcatc gtcttttgcg
     3781 atgtactcaa ccaggtgctt ggagagtgcc tcctcggcgg tgaaagactt ggattgcaga
     3841 accgctgatt cggctacctc tgcattgcgt ccacgtttgc ctacatacga tcggagcaat
     3901 gaagcagcat agttctcgat tttctccttc atcacgggtt ccaacttctc cgatgaaccc
     3961 gttggtccaa tgagcaccgg gtgcgctgcg cccgtgttgg tgcccggcgc catagcggcg
     4021 atatcggctg attccagaat gaagaaaccc gctgaagctg ctccgctgcc ggaaggagtc
     4081 acatagatga tcaccggcac aggagattcc aggactttgt ggatgatctc ctccatgtct
     4141 ttcatggcgc cgcccggcgt ctgtagctcc accagcacgg catcggcgtt tgtcgccttt
     4201 gcccggtcaa tcgcgcgctc aaaacgctcg gccgccaagc cgtgaatcgg gctgtcaacc
     4261 acgatcttca cgacatcagc cgcggcgaaa ctcggcgcaa gcgccagggc cagaacgaca
     4321 aagatcttac tcaccaagct gcggagcata cggcacctct tacctgttcc tggcggcccc
     4381 ggaggagcgc gccgctaagt ccttctttaa tgccagtgca gaggcgttag cgggatcaag
     4441 cgcgagcgcc tgatccacgt tctgctgggc ctcggcggtg tggttttcca ccagcgccag
     4501 ccgagccata acaaggtatg cctcgggaag cggtttcaac cgcaaggatg ttctggcttc
     4561 ttcgcgcgct gccggataac gctgggtggc tgcaagtacc tcggccaggc ttgcatgggc
     4621 cagagcatca aagggagtca gcgccacggc ttcgcggaac tgcttttccg cttcggcgtt
     4681 cacgccctgt tccatgaatt catgtccacg ctgaatgtgg taggcagagt ggcgcgcccc
     4741 atcctgaccg ctgaagcggg cttcctcagc gttttcgagt tccagcgcga tctgccggaa
     4801 gccggactca tcataattgc gcttgattcg ttccagtggc aaacggggtc tggactggcc
     4861 ggccgcgatg attgcgtcca ggaaattccg cgcttcacta tctttctgga tagccagcgc
     4921 cgctcgtagc tcacgcgagg cgccggttga gtcaccttcg cgatagagct ccacggccag
     4981 gttgaagtga taatcgggat cactgggctc ggtctgaacg gcgcgctcaa agtactcacg
     5041 cgctctccgg tctcctcggc gggctgaaac cacacctaaa ttgttgaaga tctcggtgag
     5101 gggcagccgc tcagacagag atgagaaagc cgcctgcgcc ttgtcgggct gaccgccgta
     5161 aaacgcagaa agaccaagat aaaactgcgc ttcattgata ttggggtcag agggggggat
     5221 gcggctcagc cacccaatcg cggaaatgta atctttcgtt gcgtagtaag tctttcccag
     5281 ttgcaacatt gccagcgtct ggttcgggtc gagccggacg gcttccagaa agcgcttgat
     5341 cttttcggga ttgctgccgg cgataacgcc gcgcatgtag ttttccagcg cgtccagccg
     5401 aacggcaggg aatcgggcga caaattcctg cttgccggtc ttgcctgcga ttttcagcga
     5461 gtcaagcaca tcccacgcga gcgcactctg gatgctgatc aaattggcca gcgatccgga
     5521 ttcggacaac tccgggccga gccgcagccg cgctgtatcc attacgcgcg cacgcgccgt
     5581 taagtttccg ccatccacgc gaaaagtgcc catgaccacg taatccgctt ccagacgctg
     5641 ggcaatttcg taggtcgtag ctcgggaagg cttggcggaa gtcggtattc ccaattgatc
     5701 gaaggccagc aggcgatcat cgcggctgac aatgtagagt ggtccggaac tgaggcgcga
     5761 gctcaaaact tccgggaaag cctcgccaat ccagtccact cccggctgag aggaggtgtt
     5821 ctcgaatggc atgatgagca gaatctggct ggctcgggac tggtccgttt gtgctgtggc
     5881 gtaaagcgga gtaaatgcca gcgccagaag gagcactgaa aggatagcgg ctgatctgct
     5941 caagatactg aaattatagg ctattctgaa cggcgtaggg cggtacaccg attgtcattt
     6001 gcgaactccc aagccgtgtg gaagacagac cagaggtagg ggaacttgat gtttgttcgc
     6061 caattttgaa aggcgtgttc agaagacggc acgccgacat tgcgtatgtt gaggtgtgag
     6121 gatgtggatg agggtttggc tttttgccat gtgctttttg actgctttcg gcatcgggag
     6181 agcgcagtcc accgtatggc aaccgtcacc cggacacata cagataccaa tttggccggg
     6241 ggcagcccct gataatcagc cgcttccggg gccggagatg gcgacaacga gaacaaatag
     6301 ccacttagtt gccggaaggc catggaccta catcagcaac gtctctgttc ccaccatgac
     6361 ggtgtattca cctcacgcga ccaacacggg agctgcggta atcgtctttc ctggtggtgg
     6421 ctatcaggtt ctggccatcg accttgaagg cacggaggta tgcgagtggc tcacgtccat
     6481 agggattacc tgtgtgctgc tcaagtatcg cgtgccggga ctggcgctct accccaaatc
     6541 gacaccttat ccccgatcag gcccgtatcc gcaatcaccc attgcgctgg aagatgctca
     6601 gaggacggtg gggctcttgc ggttaaacgc gaagaagtgg cacattga
//
LOCUS       DASQYP010000314         2121 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_139091, whole genome shotgun sequence.
ACCESSION   DASQYP010000314 DASQYP010000000
VERSION     DASQYP010000314.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 2121)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2121)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2121
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_139091"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1365
                     /locus_tag="VE783_10105"
     CDS             <1..1365
                     /locus_tag="VE783_10105"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HYX53791.1"
                     /translation="ARWAVSVAIRIGAHAVPRLADVRIDTRVLLFTLAVSLVTGAVFG
                     LTPILGIRSNDTGETLKSEGIAASANPSQVLFRRWLVTMEFALAIVLLSGAALLLKSF
                     WRMNDFPPGFEPNKLLVVNVSLENPKYFRRWPQQSAYIQELVARAGRLPGVEAVGVHC
                     GTLHQGLEMVGEVAHEKAKDAFAVRYVSTGFFHAVRAPLMAGRWPKDEEWHELKDLVL
                     VNQTFARTYGGQGDIVGRHIRGGVVDATVVGVVADFKDFQLDAAPEPQVYMAYPLAPG
                     MLNLRVFMRTENPKLLESTLPQLTSGIDPNVPVQVATLADTLSESITMRRFNMYLFEV
                     FAGSALLLAVVGIYGVLAYLVKQRTREIGIRMALGAQREGIVGMMVWQGMRISLTGTV
                     LGVVAAVALSRWMASLLYETSATDPVTFIAVSALLAVAAVLACSQPALRAAKTDPMVA
                     LRHE"
     gene            1793..>2121
                     /locus_tag="VE783_10110"
     CDS             1793..>2121
                     /locus_tag="VE783_10110"
                     /inference="COORDINATES: protein motif:HMM:NF019843.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53792.1"
                     /translation="MRRVAKLNILERLREAANEGDTYAQFELGLAFDWGNGVEQDFRK
                     AAEFYAKAAEQGHQPAEHNLLLQHISGQVKLHLPSVVFAKLESRAEAGDRDSQNNLGL
                     CFQHGYGT"
BASE COUNT          424 a          541 c          712 g          444 t
ORIGIN      
        1 gcaaggtggg cagtcagtgt ggcaatacga attggagctc acgccgtgcc gcgactggca
       61 gatgtgagga ttgacacgcg agtcctgctg tttacgctgg ctgtgtcgct ggttaccgga
      121 gctgtatttg ggctgacgcc gatactcgga ataagaagca atgataccgg cgagacgctg
      181 aaaagcgaag gaatagcagc ttcagctaac ccaagccagg tactattccg ccggtggctg
      241 gtgacgatgg aatttgcgct ggcgattgtg ctgctgagcg gagccgcgct gctgctgaag
      301 agcttctggc gaatgaacga tttccctccc ggtttcgagc cgaacaagct gctggtggtg
      361 aacgtctcac ttgaaaatcc aaagtacttc cggcgttggc cgcagcagag cgcttatatc
      421 caagaactgg tggcgcgcgc cggccggctt cccggagtgg aggcggtggg cgtccattgc
      481 ggcacgctgc atcaggggct ggaaatggtg ggagaggtgg cgcatgagaa ggcgaaagac
      541 gcgttcgcgg tccgctatgt ctcgactggg ttcttccatg cggtccgggc tcccctgatg
      601 gcgggccgct ggccgaaaga tgaagagtgg cacgagctca aggacctggt gctggtgaac
      661 cagacttttg cgcgaactta tggcgggcag ggcgatattg tgggccggca catccgcgga
      721 ggggtggtgg atgccacggt agtgggagtg gtggcggact ttaaggactt tcagctcgac
      781 gctgcgcccg agccgcaggt gtacatggcc tacccactgg ctccgggaat gctgaacctg
      841 agagtcttca tgcgcacgga aaacccaaag ctgctggagt ccacgcttcc gcagcttacg
      901 tcagggattg atcctaatgt tccggttcag gtggcgacgc tcgcggacac gctttccgaa
      961 agcatcacca tgcgccgctt caatatgtac ctgttcgaag tattcgccgg ctcggcgttg
     1021 ctgctggcgg tcgtcggaat ctatggggtg ctggcttatc tggtgaaaca gcgcacgaga
     1081 gagattggaa tccgcatggc gctgggcgcg cagcgcgaag ggattgtcgg catgatggtg
     1141 tggcagggga tgaggatctc gctcacaggg acggttttgg gcgtggtcgc cgccgtggcg
     1201 ttgtcgcgat ggatggccag cctgctgtac gagaccagtg cgaccgatcc ggtgaccttt
     1261 attgcggtga gcgcgctgct cgcggttgca gcagtgttgg catgctcgca gccggcgttg
     1321 cgcgcggcga agaccgaccc gatggtggcg ctgaggcatg agtaagggga cgtaatcggg
     1381 tgatcgggtg atcggatcat cgggtgatcg gatccgccaa gggcggctgc gtcaagtttc
     1441 tggatagcga cacgctattg aggctgacgc caggcaggac gcggcatgcc atctcttacg
     1501 ctggcaatct cctgtggtcc tgaagttcgc tcgggcgggc acggttccct catcgggatt
     1561 accacaagta gcaaaaagca aacggctccg ctcatttctg aattgagccc ttgaattgga
     1621 tgcggcgact gccgtgaggt gctttgcagg catgagcgga gcaggtaccc gcgaaattca
     1681 agaaggagac gcccgtattt gagacgaaat cccgatcgat tgtgtgagtg atcagggcct
     1741 tgtgcaggtt ggggcagtgc ctgattgttt cgcatagaag gtctccacta caatgcgtcg
     1801 tgtggccaag ctgaacattc tggaaagact tcgagaggcc gccaacgagg gtgacaccta
     1861 cgctcaattt gagctcgggc ttgctttcga ctggggcaat ggagttgaac aggattttcg
     1921 gaaagctgcg gagttctacg ccaaagctgc cgagcagggc catcaacccg cggagcacaa
     1981 cctactgttg cagcacatct ccggccaggt caaactccac ctcccttccg tggtcttcgc
     2041 caaacttgag agcagggcgg aggcaggaga tcgtgattcg caaaacaatt tggggctctg
     2101 ttttcagcat ggatacggca c
//
LOCUS       DASQYP010000315         3453 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_96099, whole genome shotgun sequence.
ACCESSION   DASQYP010000315 DASQYP010000000
VERSION     DASQYP010000315.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 3453)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3453)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3453
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_96099"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..448)
                     /locus_tag="VE783_10115"
     CDS             complement(<1..448)
                     /locus_tag="VE783_10115"
                     /inference="COORDINATES: protein motif:HMM:NF028500.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53793.1"
                     /translation="MLELSTDAKFVKGIGPRVAEMLAQKGLFTVEDLLYYLPFRYENR
                     LNPRGIRELQPGEMATVVAEVRNSGLFRTKKMPLFEMVAAQGTASIRCIWFNGTYLRD
                     RFKPGQLVALYGKVERGWKDRGLQINQPQFEILDDGQGELEAEDVSA"
     gene            644..1141
                     /locus_tag="VE783_10120"
     CDS             644..1141
                     /locus_tag="VE783_10120"
                     /inference="COORDINATES: protein motif:HMM:NF020455.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CVNH domain-containing protein"
                     /protein_id="HYX53794.1"
                     /translation="MRLLTMVAALVFLSLFSSALGAQTAPPRGPYTQSCQDIQMKGTT
                     LHAKCLTAGGQLASVEMKNANRCSDGVVNINGILSCQAGTIPPGSYLSSCNDVHLQGT
                     TLAASCTDAKGKEMKAELRNANQCAGDIANQAGNLRCVEPGKKIETAQADSDKKKKKH
                     KLLVF"
     gene            complement(1138..2856)
                     /gene="dacB"
                     /locus_tag="VE783_10125"
     CDS             complement(1138..2856)
                     /gene="dacB"
                     /locus_tag="VE783_10125"
                     /EC_number="3.4.16.4"
                     /inference="COORDINATES: protein motif:HMM:NF014200.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004175 - endopeptidase activity [Evidence
                     IEA];
                     GO_function: GO:0009002 - serine-type D-Ala-D-Ala
                     carboxypeptidase activity [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanyl-D-alanine
                     carboxypeptidase/D-alanyl-D-alanine-endopeptidase"
                     /protein_id="HYX53795.1"
                     /translation="MRPDCSGFLIVLIVCGQLVCAQPLKTAAHKQPPRPPLAEQINAL
                     ISQPPYSRAHWGIDAVDLTTGKVLFSTNPDQLFIPASNAKLFTTAAALGIAGPEYRFR
                     TTIETAGSIDAQGRLHGDLAVVGRGDPNISGRIVPYQVKSERVPPHTQVLEELADQIA
                     RAGLKSVEGDVIGDDTYYSPERYAEGWAQDDLQWIDGAPVTALAFSDNSQFIQIAPGA
                     QPGDKAVITLETPLEYYQFENRIVTTVAGVKAKVGIHREPGSKTVYLWGTLPVGAPVM
                     KEALAIEDPAEFTAQLFRALLEKRGISVSGKTRARHGDIAQFYDATPQQLPVQGMENP
                     AAAPSQLPSPSMENPGVQPQAGQDTPQERTPSPPTPSNDLPSPTKVLAEHISLPLLED
                     VRVTNKVSQNLHAEMALRLVAKLSGQTPSFEGGTAAVRHFLELAGLKDDEFVFLDGSG
                     LSRRDLVTPAAVVQLLVYASRQPWGEAYRQSLPVGGVDGSLSERFLNTPAGGLIHAKT
                     GTLSHVNALSGYGETRSGRPFVFSIFCNNHNVAAGKTLGVIDAIVQLLVSEGDASVLK
                     RKRAVH"
     gene            2887..>3453
                     /gene="folP"
                     /locus_tag="VE783_10130"
     CDS             2887..>3453
                     /gene="folP"
                     /locus_tag="VE783_10130"
                     /EC_number="2.5.1.15"
                     /inference="COORDINATES: protein motif:HMM:TIGR01496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004156 - dihydropteroate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0009396 - folic acid-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydropteroate synthase"
                     /protein_id="HYX53796.1"
                     /translation="MQRSCSPWRLRSRELALGERTLVMGVLNVTPDSFSDAGSFFRRD
                     RAVARALQMLEEGADILDIGGESTRPGAAVADSGVSAQEELRRVLPVIEDLLRERATT
                     VISVDTYKAEVAVAALQAGAEIVNDVSALRWDEQMKPTLAQHPCGVVLMHTHGRPQEW
                     KTLPPPQDIVKEVSGELREWASDAISAGI"
BASE COUNT          728 a         1030 c         1005 g          690 t
ORIGIN      
        1 tggctgaaac atcttcggct tcgagttcgc cctgtccgtc atccaaaatt tcaaactgcg
       61 gctggttgat ctgcaggccg cggtctttcc acccgcgttc caccttgcca taaagcgcca
      121 ccagctggcc cggcttgaag cggtcccgca gataagttcc gttgaaccag atacagcgga
      181 ttgaagccgt gccctgggca gcaaccatct cgaatagcgg catcttcttc gttcggaaca
      241 ggccggagtt gcgcacttcc gccaccactg ttgccatctc acccggctgg agctcgcgga
      301 tgccgcgcgg gttcagccgg ttctcatagc ggaaaggcag gtagtagagc aggtcttcca
      361 ccgtgaagag gcccttctgg gcaagcatct ccgcaacacg cgggccgatg cccttcacaa
      421 acttggcgtc agtggaaagt tccagcattc ggatgatcag cggcggaatg agtcgctgct
      481 atcgatcata attcagccgc ggcgcaaagc tcgcggcccg caagatcgcg cagctgatta
      541 aaaatttggg ccagccagaa aactgctcta tactggcgat cacacagctc caaaaactgc
      601 tcgaaacaaa aacccgccgc acccctgcgg ccaaggatga gttatgcgtt tgctgactat
      661 ggttgccgct ctggtatttt tgtccctttt tagctctgcc ctgggagctc agactgctcc
      721 accgcgcggc ccttacacgc agagctgtca ggacatccag atgaagggca ccacgctcca
      781 cgcgaagtgc cttaccgcag gcggccaact cgcgtcggta gagatgaaga acgccaacag
      841 gtgttctgac ggggtggtga acatcaacgg catcctgagc tgccaggccg ggaccattcc
      901 tcccggttcc tatctcagct cttgcaatga cgttcacctg cagggaacca cgctggccgc
      961 aagctgcacg gatgcaaagg gcaaggagat gaaagcagaa ttgcgcaacg ccaaccagtg
     1021 cgccggagac attgccaacc aggccggcaa cctgcgttgt gttgagcccg ggaaaaagat
     1081 tgagacagcg caggcagatt ccgacaagaa gaaaaagaag cacaagctgc tggttttcta
     1141 gtgcacggcc cgcttgcgct taagcacgct ggcatcgcct tccgaaacca gcagctgcac
     1201 gatcgcatcg atcactccca gtgttttgcc ggccgcaaca ttgtggttgt tgcagaaaat
     1261 tgagaacaca aacggccgtc cgctgcgggt ttctccataa cctgaaagtg catttacatg
     1321 gctcagcgtg ccggtcttgg catggatcag tcctccagcc ggggtgttga ggaagcgttc
     1381 agaaagcgag ccatccaccc cgcctaccgg cagcgattgc cggtaagctt caccccatgg
     1441 ctgccggctc gcgtacacca acagttgcac taccgccgca ggcgtaacca gatcgcgacg
     1501 cgagagcccc gatccatcca ggaatacaaa ctcgtcatct ttcaacccgg ccagttcaag
     1561 aaagtgccga accgcggcgg tcccgccttc aaatgagggc gtctggccgg aaagcttcgc
     1621 caccaatcgc agggccattt ccgcatgcag gttctgactg accttattgg ttacgcgcac
     1681 atcttccagc agcggcaatg aaatgtgctc tgccaatact ttcgtcggcg acggaaggtc
     1741 attgctgggc gtcggaggag agggagttct ttcttgtgga gtgtcttgtc ctgcctgcgg
     1801 ttgcactccg gggttttcca tgctgggcga cggaagctgg cttggcgctg ccgcaggatt
     1861 ctccatcccc tgcacaggta gctgttgcgg tgttgcgtcg tagaactggg caatgtcgcc
     1921 gtgccgcgct cgtgttttac cggacacgct gattccacgc ttctccagca atgcacgaaa
     1981 gagctgcgcg gtaaattcag cagggtcttc gatggccaac gcttccttca ttaccggggc
     2041 acccaccgga agggttcccc agagataaac cgtcttcgat cccggctcgc gatgaattcc
     2101 gactttggcc ttcactcctg ccacggtagt cacaatccgg ttttcgaact ggtagtactc
     2161 aagcggagtt tccagcgtaa tcacagcctt gtcaccgggc tgggcgcctg gagcaatctg
     2221 gataaattgt gaattgtcac tgaaggccag ggccgtaacg ggagcgccgt caatccactg
     2281 caaatcgtcc tgcgcccagc cttcagcata gcgctcgggc gaatagtagg tatcatcgcc
     2341 aattacgtcg ccttccacgc tcttcaatcc agcgcgtgca atctggtccg ccagctcttc
     2401 cagcacctga gtgtgcgggg gcacacgctc gcttttcacc tgatagggca caatgcggcc
     2461 ggagatgttc ggatcgcctc ggcccacgac cgccagatca ccatgcagcc ggccctgcgc
     2521 gtcaattgag ccggcggtct cgatcgtcgt gcgaaagcga tattccggcc cggcgatgcc
     2581 gagcgcggct gccgtagtga agagcttggc attcgaggcg gggatgaaaa gctggtctgg
     2641 attcgtggag aaaagcacct tgcccgtggt caggtcaact gcgtcaatgc cccagtgcgc
     2701 tcgcgaatac ggcggctgtg agatgagcgc attgatctgt tcggccagtg gtggcctggg
     2761 tggctgcttg tgtgctgccg ttttcagtgg ctgagcgcaa accaactgcc cgcacacgat
     2821 caggacaatg agaaaaccag agcaatcagg ccgcatgaga gttggcgaaa ttatacaatc
     2881 ccgctcatgc agagaagttg ctctccatgg cggctgcgta gccgcgaact cgcgctgggc
     2941 gaacgcacgc tggtgatggg cgtgctcaac gtaacaccgg attcattttc cgatgccggc
     3001 agcttcttcc gacgcgaccg tgcagtcgct cgcgccctgc agatgctgga ggaaggcgcc
     3061 gacattctcg atatcggcgg cgagtccacc cgtccgggcg cggcggtggc ggactccgga
     3121 gtttcggccc aggaagaatt gcggcgcgtg ttgccggtaa tcgaagactt gttgcgggaa
     3181 cgcgcaacaa ccgtgatctc ggttgatacc tacaaagcgg aagtggcagt ggcggcgcta
     3241 caagccggag cggagatcgt gaatgacgtg agcgctctcc gctgggatga gcagatgaaa
     3301 cccacactgg cacaacatcc ttgtggcgtg gtcctgatgc atacgcacgg gcgtccccag
     3361 gaatggaaga cgctgccgcc gccgcaagac atcgtgaaag aagtcagcgg cgaactgcgc
     3421 gagtgggcct ccgacgcaat ctccgcaggt atc
//
LOCUS       DASQYP010000316         8694 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_53741, whole genome shotgun sequence.
ACCESSION   DASQYP010000316 DASQYP010000000
VERSION     DASQYP010000316.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 8694)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8694)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8694
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_53741"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(280..1113)
                     /gene="larE"
                     /locus_tag="VE783_10135"
     CDS             complement(280..1113)
                     /gene="larE"
                     /locus_tag="VE783_10135"
                     /inference="COORDINATES: protein motif:HMM:TIGR00268.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016783 - sulfurtransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent sacrificial sulfur transferase
                     LarE"
                     /protein_id="HYX53797.1"
                     /translation="MTLAAKKEKLDQLVQAQGRTLVAYSGGVDSAYLAFAASRVLGDD
                     MLAVIADSPSLARTHLQDAVSFAEEQRIPLKIIQTAEMERPEYVRNDARRCFHCKDEL
                     FAVMEEFAAAQRFQTIAYGVNVDDQSDFRPGQLAAKQHHVAAPLLEARLTKADVRELA
                     RMAGLRVWDKPASACLSSRIEYGRPVTREALAAVEQGEDALRGLGFRQFRLRHHGDIA
                     RIEISNDELPRALNVLMFSRFTGIFKGLGFKFVTVDTEGFRSGSMNSSLPGNGLVKLL
                     S"
     gene            complement(1158..3752)
                     /gene="lptD"
                     /locus_tag="VE783_10140"
     CDS             complement(1158..3752)
                     /gene="lptD"
                     /locus_tag="VE783_10140"
                     /inference="COORDINATES: protein motif:HMM:NF016348.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0019867 - outer membrane [Evidence IEA];
                     GO_process: GO:0010033 - response to organic substance
                     [Evidence IEA];
                     GO_process: GO:0061024 - membrane organization [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LPS assembly protein LptD"
                     /protein_id="HYX53798.1"
                     /translation="MRSQTILVITAGVLCHLVLLAPLLASQTLPAQQPVEAGNPCHIV
                     LTSPPTRPGQESEKAEKEAEQAKKIPISESQPVDVTANQCEKDGNNYTLRGDVEVTFG
                     DYRFSGDTVTYNSETGELTSNGGASLSGGVRDLHITATQGTYNLKERRGKFYDVVGTT
                     GARFRGKNVTLTSSSPIAFTGKVVEQTGPDEFVLHSGSVTSCELPKPKWTFNAGTIVL
                     RVGNYAHVYNTTFRLKGVPVIYLPYVAPPVERLGRQSGFLIPTFGTSNARGTILGDSF
                     FWAVNRSLDTTFGAEYYSKRGWSLQDTIRAKPSDNSFLNVNYFQVLDRGIAGTDANGK
                     PTTVKQGGEDVKLNGEANFSHRIRGVAALDYLSSFVFRLAFTENFSQAVDSEVKSVAF
                     LSKSTHGFSFNAFGSRYQNFQSTNPGDVITILHGPALELSSVDQKILNSPVYWSYDIA
                     GEGVRRSEPGFVTPGLVGRFDIYPDFSLPLLVNGWMIRPEVDLRNTVYTQQQVPGTAQ
                     PVPVHNEFNRRTIDTALELRPPALAKEFDGEFLGAKVKHTIEPRVVYRYTNGVESFGN
                     IIRFDSRDILSNTNEVEFGLMQRLFFKKQNADCGGQVKVQTNTAPITPAAPGRTAPKK
                     PAEVTCAPAGADEFLSWEVKGKYFIDPTFGGAVVSGQRNVLTTTVDYAGIAFLTDPRR
                     FAPVVSRLRVRTTRNSDLEWELDYDSKKGRINSSTVYANLHLGNFLVEGSHAYLQVPG
                     EVVFNTPPAGHAPTPLPTCIPGVFNPTNPCVPPVFDQWRALLGYGNPSKRGWSAAANV
                     GVDSEFNLVQYSAAQTAYNWDCCGVSFEYRRFSLGNNIRNENQYRFSFTLANIGSFGN
                     LKRQTRLF"
     gene            3855..4907
                     /locus_tag="VE783_10145"
     CDS             3855..4907
                     /locus_tag="VE783_10145"
                     /inference="COORDINATES: protein motif:HMM:NF018028.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RDD family protein"
                     /protein_id="HYX53799.1"
                     /translation="MNCPLCGNSYPCAHSHPQSSLLLEPAEQANGPADVTAELEIQEA
                     DWRGEVASRVQQHRSRRRSDDAVERSLDFDFPGATTGLAPRPNLAARRRQTMEMIQSV
                     SFNSALDVAPEPQFENGEPEPVRMGAPKIIRFPRSAVTEIPEPQTSPEIEEALEVNDL
                     ESPRILMDAPPPQPPAEQLELLPNFDDIQLESVHNPLLAEIDALPRPAALGQRMMAGV
                     IDAVVVVAAVMMFNMAFSQLAEAALQSRVALLSTVMVGAVVWTLYQYLFLVYGRRTPG
                     MNLGGLELSTFDGKPLSVRQRQYRAMAGTLSVVSVGLGYLWALVDENQLGWHDRITQT
                     LVKSAGEERVRQQLGW"
     gene            complement(4916..5323)
                     /locus_tag="VE783_10150"
     CDS             complement(4916..5323)
                     /locus_tag="VE783_10150"
                     /inference="COORDINATES: protein motif:HMM:NF013970.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system VapC family
                     toxin"
                     /protein_id="HYX53800.1"
                     /translation="MNYLLDTNACIALMAPDPNRVQARFARSVGKADRFFTSSVVTFE
                     LWYGVFKSSRKVENTRRCETFFSGPIDIVPLEESAAKIGGEIRAVLEAAGRPIGAYDL
                     LLAAQAIHYKMTLITANVSEFSRVKGLDWEDWS"
     gene            complement(5320..5559)
                     /gene="vapB"
                     /locus_tag="VE783_10155"
     CDS             complement(5320..5559)
                     /gene="vapB"
                     /locus_tag="VE783_10155"
                     /inference="COORDINATES: protein motif:HMM:NF040493.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system VapB family
                     antitoxin"
                     /protein_id="HYX53801.1"
                     /translation="MSRFAKLFQNGSSQAVRLPREFRFKGEKVRIRRVGRTVVLEPLE
                     EDVEAWLAELKKVPADPEFMKERKQPKTPKREIFK"
     gene            complement(5605..6897)
                     /locus_tag="VE783_10160"
     CDS             complement(5605..6897)
                     /locus_tag="VE783_10160"
                     /inference="COORDINATES: protein motif:HMM:NF013188.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006812 - monoatomic cation transport
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation:proton antiporter"
                     /protein_id="HYX53802.1"
                     /translation="MPSSAVGPLIFFIAVLLTAAHLLGYLFARLRQPRVVGEILAGIF
                     LGPFVLGRMPAYTHFLQLDAATAPKKAALDLIYQLGLLMLMFLSGAETKALFQKHERK
                     QIAWLAGVGTLAPFLIMLFAAGFLPLGSFIGVKANRTALLLVMSIAVAVTSIPVISRI
                     FFDLKILHTRFARLVLGVAVLEDIGLWAVLAVATAMADSSGLPAGKLALHIGLTLLYF
                     SLGLTLIPRAVKRVSKSRFNLLAINSPVTFTLLIVFGYVAVAGLIDVNLVFAAFLAGF
                     AVSRKKLGDALEIISRFSFALFIPLYFALVGYSLIFDKQFSVLMLLGFLAGACALKLM
                     AVSLGGWLAGFRGLDVVNLAVATNARGGPGIVLASVAYEAGIISAAFYTTLVLVAVLT
                     SQAAGAWLELVLRRGWPLLSGEDAVIAPAEKGAKELAA"
     gene            6972..8486
                     /gene="gltX"
                     /locus_tag="VE783_10165"
     CDS             6972..8486
                     /gene="gltX"
                     /locus_tag="VE783_10165"
                     /EC_number="6.1.1.17"
                     /inference="COORDINATES: protein motif:HMM:TIGR00464.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009332 - glutamate-tRNA ligase complex
                     [Evidence IEA];
                     GO_function: GO:0004818 - glutamate-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006424 - glutamyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate--tRNA ligase"
                     /protein_id="HYX53803.1"
                     /translation="MKMMVSHGKVRVRFAPSPTGHLHIGNVRTALFNWLFARQKGGTF
                     ILRIEDTDLERSEARYETQLLDDLKWLGIDWDEGPDIGGPFPPYRQTDKMGVYQAYAE
                     KLIADNKAYYCFCTAEELEKERERAMAEQRQPVYSGKCRRLDPAEVQRRRAAGEQAAI
                     RIKMPDHPIRFHDIVRGNVEFAPEIVGDQIIVRSNGMPIYNYVVVIDDADMQITHVIR
                     GDDHISNTPKQVAVYEALGLPTPEFAHLSTILGPDGQRLSKRHGATSVANFREMGVLP
                     EALMNYLALLGWAPSGGDREIFPKEELIKEFSLERVTPSPAVFDMTKLYWLNRHYIKN
                     AAPERLHQMGCGFLQHAGLLPSRIDSATQAWANQLIDLLAPYVDKLDELPERAAIIFR
                     HDPAAALSNAENAAAFSNSKAAEVVADFGRRTSADSPLTPEHFKAVMNEIKTGVGVKG
                     KDLFHPVRIALIGAHSGPDFDHLIPLIEAGSRLALPTHVKSVRERITAFAAALG"
     gene            8493..>8694
                     /locus_tag="VE783_10170"
     CDS             8493..>8694
                     /locus_tag="VE783_10170"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53804.1"
                     /translation="MIPHLRFDFTFPRNYETRVLEGAPLPHPLEKLYHYPAEIEEGDR
                     SGVYVRVAPRGGTAWNGFFALGF"
BASE COUNT         1905 a         2559 c         2463 g         1767 t
ORIGIN      
        1 tgacgctgtc ataacctgga taatcgctgg gcttcggatc agaaaattgc attttcacgt
       61 acggcggtac gttgtattgc gtccggatga gtgactctgc cttcctccgc acttcctgcg
      121 gaagagcgga gccggggttt gcctgtgccg agcagcccag tgaaaggaaa cagcacgcga
      181 gacaaagccc ctctaacaga ttgataaatc tagccaattg aaccgccttc tgttgcttga
      241 tgttacagac gattatctca tgctgagggt agacaaagcc taggagagaa gctttaccag
      301 gccgtttccg ggcagcgaag agttcatgga cccggagcgg aatccctccg tgtccaccgt
      361 cacgaacttg aagccgagtc ccttgaagat cccggtgaat cgggagaaca tcagtacatt
      421 caaagcccgt ggaagttcgt cattggaaat ctcaatgcga gcgatatcgc cgtgatggcg
      481 gagccgaaat tgacgaaacc ccagtccgcg caacgcgtct tctccctgct caaccgccgc
      541 cagagcctca cgggtgaccg gccggccgta ttcaatccgg gatgacagac atgccgatgc
      601 aggcttgtcc caaacccgca gacccgccat ccgggcaagc tcgcggacat cagccttggt
      661 caatcgcgct tcgagcagcg gcgcggcgac gtggtgctgt ttcgccgcca gttggcccgg
      721 ccggaaatca ctttgatcgt ccacgttcac gccatatgcg attgtctgaa atctctgggc
      781 tgccgcgaac tcttccatca cggcgaagag ctcgtctttg cagtgaaaac agcgccgcgc
      841 gtcgttccgg acgtattcag gcctttccat ctcagccgtt tgaatgatct tgagtggaat
      901 tctctgctct tccgcgaaag agaccgcatc ctgcagatgg gttcgcgcca gactcggaga
      961 atcggcaatc accgccagca tgtcatctcc caatacgcga gaggcagcaa aggccaggta
     1021 tgcagagtcc actccgccgg aataagcaac cagcgtgcgt ccctgcgcct gcaccaactg
     1081 gtcaagcttc tccttcttgg cagccaacgt catcttttca ttttagcccc tgaatgcagg
     1141 aaggatcgaa tgcccactca gaacagcctg gtctgccgct tcaggttacc aaaggagccg
     1201 atattcgcca gggtgaagct gaatcgatac tgattctcat tgcggatgtt gttgcccagt
     1261 gaaaagcgcc ggtactcaaa actgacgccg cagcaatccc agttgtaggc ggtctgcgca
     1321 gccgagtact ggaccaggtt gaactcggaa tccacgccca cgttagctgc ggcactccag
     1381 ccccgcttac tcggatttcc ataacctagc agtgccctcc attgatcaaa aacagggggt
     1441 acgcaggggt tggtcgggtt gaagacgccc gggatacaag tagggagcgg ggtcggggcg
     1501 tggcccgcag gaggcgtgtt gaacacaacc tctccgggaa cctgcagata agcgtggctg
     1561 ccttccacga gaaaattccc aagatgcagg ttggcataca ccgtgctgga gttgatgcgc
     1621 cctttcttgc tgtcataatc cagctcccat tccagatcac tgtttcgcgt ggtgcgaaca
     1681 cgcagacgcg ataccaccgg agcaaacctt cttggatcgg ttagaaatgc gattcctgcg
     1741 tagtccacgg tggtggtaag cacattgcgt tgcccggaaa ctacagctcc gccaaatgtg
     1801 ggatcaatga agtacttgcc tttcacttcc cagctcagga actcatctgc gccggcggga
     1861 gcgcaggtga cctccgccgg cttcttcggg gccgttcttc cgggtgcagc cggcgtgatc
     1921 ggcgccgtat tagtctggac ttttacctgg ccgccgcagt ctgcattctg ctttttgaaa
     1981 aacaggcgct gcatcaggcc gaactccact tcgttggtgt tgcttagaat gtcgcgggaa
     2041 tcgaagcgga tgatatttcc aaaactctca acgccgttgg tgtagcgata gactacccgc
     2101 ggctcaatgg tgtgcttgac ctttgctcca aggaactcgc cgtcaaattc tttggccagc
     2161 gccggcggcc gcagctcaag agcggtgtca atggtgcgac ggttgaactc attgtgaacc
     2221 ggaaccggct gcgccgtgcc cggaacctgc tgctgggtat aaaccgtgtt ccgcagatcc
     2281 acctcaggac gaatcatcca gccattcacg aggagcggga ggctgaaatc gggatagata
     2341 tcgaaacggc ccaccagccc gggagtgacg aagcctggtt cgctgcgcct cacgccttct
     2401 ccggcgatat cgtacgacca gtaaaccggg gaattcagaa ttttctggtc cacgctggag
     2461 agttcaagag ccggtccgtg gaggatcgta atcacatcgc ccggattggt gctctggaag
     2521 ttctggtatc gcgaaccgaa cgcgttaaag gagaagccgt gcgtgctttt ggagaggaaa
     2581 gccactgact tcacctcaga atccaccgcc tggctgaagt tctcagtaaa cgccagccgg
     2641 aaaacaaatg aactcagata atcgagcgca gccacgccac gaattcggtg gctgaagttc
     2701 gcctccccgt tgagcttcac atcttcgccg ccctgcttca ccgttgttgg cttcccattc
     2761 gcgtctgtgc cggcaatacc gcgatcgagt acctgaaagt agttaacgtt cagaaatgag
     2821 ttgtcgctcg gctttgctcg gatggtgtcc tggagtgacc agcctcgctt ggagtagtat
     2881 tcagcgccga acgtggtatc caggctgcgg ttcacggccc agaagaacga atcacccagg
     2941 atcgttccgc gtgcgttcga ggtgccgaag gtcgggataa gaaacccgct ctggcgtccc
     3001 aggcgttcca ccggaggcgc aacatagggc agataaatga ccggaacgcc tttcaggcga
     3061 aaggtcgtgt tgtaaacgtg cgcgtagttc cccacccgca acacgatcgt gccggcattg
     3121 aaagtccatt ttggtttagg cagttcgcag gaggtcaccg agccgctgtg cagcacaaat
     3181 tcatccgggc cggtctgctc caccaccttg cctgtaaacg caatgggact tgaggaggtc
     3241 agggtcacat tcttgccgcg aaaacgcgcg ccggtggtcc caaccacgtc gtaaaacttc
     3301 ccgcgccgct cttttaggtt gtaggtgccc tgggtcgccg ttatgtgcag gtcgcgcacg
     3361 ccgccgctca gggacgcgcc cccattgctg gtaagctctc cggtttccga gttgtaggtt
     3421 acggtatcgc cactgaaccg ataatcaccg aacgtgacct ccacgtctcc ccggagcgtg
     3481 tagttgtttc catccttctc gcactgattc gccgtgacgt ctaccggctg cgattcgctg
     3541 atggggatct tcttcgcctg ctcggcttct ttttcagctt tctcgctctc ctggcctgga
     3601 cgcgtgggcg gtgaggtgag cacgatgtgg caagggttgc ccgcttcgac cggctgctgt
     3661 gcagggagcg tctggctcgc taataacgga gccagcagaa caaggtgaca aagcacgccc
     3721 gctgtgataa ctagaatagt ttgggaacgc attccgtacg ctttggaccg gactgggcaa
     3781 ggtaacatgc ccgaatcggg aaaggcaaaa cggcgtgctc tcccgcgctt ctggcgaagc
     3841 tcacaacccg ctccatgaat tgcccactat gcggtaactc ctatccgtgt gcgcatagcc
     3901 atccccagag ttcccttctc cttgagcctg ctgagcaggc taatgggccg gctgatgtta
     3961 cggcagagct tgaaattcag gaagccgact ggcgcggcga ggtggcttcc cgcgtgcaac
     4021 aacaccgctc ccggcgccgc agtgatgatg cggttgagcg ctcgcttgac tttgacttcc
     4081 ctggagccac caccgggctt gcgccgcgac cgaacctggc ggcgcgacga cgccagacca
     4141 tggagatgat ccagagcgtt tccttcaaca gcgctcttga tgttgctcct gaaccgcagt
     4201 tcgaaaacgg tgagccggaa cctgtgcgca tgggagcgcc gaaaatcatt cgctttcctc
     4261 gcagcgccgt tacagagatt cctgaaccgc agacctcgcc agagattgag gaggcgcttg
     4321 aagtgaatga cctggagagt ccccggattc taatggacgc cccaccgccg cagcctccag
     4381 cggaacaact ggagctgctg cccaactttg acgatattca gctcgaatcg gtgcacaacc
     4441 cgcttctggc tgaaattgac gcgctaccca ggcccgcggc gctcggccag cgcatgatgg
     4501 ccggagtgat tgatgccgtc gtggtggtcg cggccgtgat gatgttcaac atggcgttct
     4561 cgcagctcgc tgaagcagcg ctgcaatcgc gcgtagcgct gctttccacc gtgatggttg
     4621 gagcggtggt gtggaccctg tatcaatatc tgtttctcgt ctacgggcgc agaacgcccg
     4681 gcatgaattt gggcggcctg gagctttcca ccttcgatgg caagccgctc tcagtgcggc
     4741 agcggcagta ccgcgcaatg gccgggactc tctctgtggt ttctgttggt ctgggctatc
     4801 tgtgggccct ggtggatgag aaccagcttg gctggcatga ccgcatcaca cagacgctgg
     4861 tgaagtcagc aggagaagaa cgcgtaaggc agcaactcgg ttggtgacga ttacgctaag
     4921 accaatcttc ccagtctagg ccttttacgc gcgagaactc tgatacgttc gcagtgataa
     4981 gagtcatctt gtagtggatt gcctgggcag caagaagcag atcgtatgct ccgataggac
     5041 gcccagccgc ttccaatacg gcgcgaatct cgcccccaat ttttgcggca ctttcctcaa
     5101 gcggaacgat atcgatcggc ccggaaaaga aagtttcgca gcgacgcgtg ttttccacct
     5161 tacgggagct tttgaaaacg ccataccaga gctcgaatgt cacaacagaa gaggtgaaga
     5221 acctgtcagc tttgcctaca ctgcgggcga acctcgcctg aacacggttc ggatccggcg
     5281 ccatcagcgc gatacaggcg ttcgtgtcga gcaggtaatt cacttgaaga tttctcgttt
     5341 cggcgttttg ggctgtttac gctctttcat gaactcgggg tcagctggta ctttcttgag
     5401 ttcggccagc cacgcctcaa catcctcctc cagaggttcg agcaccacgg ttcgacccac
     5461 gcgtcgaata cggaccttct cgcccttgaa acggaattca cgcggcaaac gaacagcctg
     5521 gctgctccca ttctgaaata gcttggcaaa gcgactcatc gccaactcct tcgagtatat
     5581 actctaagta tatactacca cggatcacgc cgcgagctct ttcgctccct tttccgcggg
     5641 agcgatcacc gcatcctctc ctgaaagcaa cggccatccg cgccgcagaa ccagctctaa
     5701 ccatgcacca gccgcctgcg aagtcagaac cgccacgagc accagcgtgg tgtagaacgc
     5761 cgcgctgatg atccctgctt cataggccac gctggccagc acaatgcccg gtcctccacg
     5821 agcattggtg gctaccgcga ggtttacaac gtcaaggccg cggaagccgg ccagccagcc
     5881 tccaagcgaa actgccatca gcttgagcgc gcacgccccc gccaggaagc cgagcagcat
     5941 caggaccgag aattgcttgt cgaaaatgag actgtatccg accagggcga aataaagcgg
     6001 gatgaagaga gcaaaggaga aacgcgagat tatctccaga gcgtcgccca gcttcttgcg
     6061 tgagacggca aaaccggcga ggaacgccgc aaacacaaga ttcacgtcaa tcagcccggc
     6121 aacggcgaca tagccgaaaa caatcagcaa cgtaaaggtc acgggcgagt taatggccag
     6181 cagattgaat cgggattttg agacgcgctt caccgcgcgc ggaatgaggg taagccccag
     6241 cgagaaatag agcagcgtca gcccaatatg gagcgccagt tttccagccg gcagcccaga
     6301 ggaatccgcc atggctgtcg ctactgccag caccgcccac aacccgatgt cctcgagcac
     6361 agccactccc agcaccagcc gtgcgaagcg cgtgtgcaga atcttcaaat cgaaaaaaat
     6421 acgcgagatc accgggatgg aggtcacggc gacggcgatg ctcattacca acagcaaggc
     6481 cgtgcgattt gccttcacgc ctatgaagct gccgagcggc aaaaatcccg cggcaaagag
     6541 catgatcaga aacggagcga gcgtgcccac ccccgcgagc caggctatct gcttgcgctc
     6601 atgcttctga aaaagggcct tggtctcggc gccggaaaga aacatcagca tcagcaatcc
     6661 aagctgatag atcagatcaa gggcagcttt cttgggcgcc gtggccgcgt ctagttgcag
     6721 gaaatgggtg taagcgggca tgcgacccag gacgaaaggc cccagaaaaa tccccgccag
     6781 aatttcacct accactcgag gctggcgcaa acgagcgaac aggtatccca gcagatgggc
     6841 cgccgtaagg agcaccgcga tgaagaatat gagtgggcca actgcgctgg agggcataaa
     6901 acaataagcg gcttacccca gttctgatga gcacagctgc tccacagttg ccgcgcaggc
     6961 gctttgttac catgaagatg atggtttcgc acggcaaagt ccgcgtccgg tttgcacctt
     7021 cgcctaccgg tcacctgcac atcggcaacg tccgaactgc gctcttcaac tggctctttg
     7081 cccggcagaa ggggggcacg ttcatcctgc gcattgaaga taccgatctg gagcgcagtg
     7141 aagcgcgcta cgaaactcag cttctcgatg acctcaaatg gctcggcatt gactgggacg
     7201 aggggcctga cattggcgga ccatttccgc cgtatcgcca aaccgacaag atgggcgttt
     7261 accaggcgta cgcggagaag ctgatcgctg acaacaaggc gtactactgc ttctgcaccg
     7321 cggaagagct ggaaaaggag cgcgaacggg cgatggcgga gcagcgccag cccgtctact
     7381 cgggaaagtg ccgacgtctt gatccggcgg aagtgcagcg acgtcgcgcg gccggcgaac
     7441 aggccgccat ccgcatcaaa atgccggacc acccgattcg ttttcacgac atcgtgcgcg
     7501 gcaatgtgga atttgctcct gagattgtgg gcgaccagat catcgtccga tccaatggaa
     7561 tgccgatcta caactacgtg gtggtgatcg acgatgctga catgcagatc acgcacgtaa
     7621 tccgcggcga cgaccacatc tccaacacgc cgaagcaggt ggctgtgtat gaagcactgg
     7681 gcctgccgac gccggagttt gcgcaccttt ccaccattct cggtccggac ggacagcgcc
     7741 tttccaaacg acatggcgca acttcggtgg caaacttccg cgaaatggga gtgctgccgg
     7801 aggcgttgat gaactatctg gcgctgcttg gctgggcccc cagtggcggc gatcgggaaa
     7861 tcttccccaa agaagagttg atcaaagagt tttcccttga gcgcgtaacc ccttcgccag
     7921 ccgtctttga catgacgaag ctgtactggc tgaaccggca ttacatcaaa aatgctgctc
     7981 cggagcgtct gcaccagatg ggctgcggat tcttgcagca cgcaggattg ctgccctcac
     8041 gcatcgattc cgccacgcag gcctgggcca atcaactgat cgacctgctg gcgccctatg
     8101 tagataagct cgacgagttg ccggaacgag ctgccatcat cttcaggcat gaccctgcgg
     8161 ctgcgctctc gaacgccgag aatgcagccg cattctcgaa ttctaaagcc gctgaggtgg
     8221 ttgccgactt cgggcgccgc acttccgcag actctcccct tacgccggag cattttaagg
     8281 ccgtaatgaa cgagatcaag acaggcgttg gcgtgaaagg caaagacctt tttcatccgg
     8341 taagaatcgc gctcatcggc gcacactcag gcccggactt cgatcacctg atcccattga
     8401 tagaagctgg cagccggttg gcgctgccta cgcacgtaaa gagcgtgcgt gagcggatca
     8461 ccgcttttgc agccgcgcta gggtagcttg caatgatccc tcacctaagg tttgatttca
     8521 catttccgcg gaattatgag acccgggttc tggaaggcgc acccctgccg cacccgctgg
     8581 agaagctgta tcactacccg gctgaaatcg aggaaggtga ccgcagcgga gtttatgttc
     8641 gggtggctcc gcgcggtggc accgcatgga acggcttttt tgcccttggc tttg
//
LOCUS       DASQYP010000317         8485 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_35930, whole genome shotgun sequence.
ACCESSION   DASQYP010000317 DASQYP010000000
VERSION     DASQYP010000317.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 8485)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8485)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8485
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_35930"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            192..602
                     /locus_tag="VE783_10175"
     CDS             192..602
                     /locus_tag="VE783_10175"
                     /inference="COORDINATES: protein motif:HMM:NF024092.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HYX53805.1"
                     /translation="MRAEENKQIVQSIFTELAQGNSRPLVEAMADDFSWTVTGSNRWS
                     GTYKGKQAVLNDVLGQLRARIEGRIKTIAHRFIAEGDFVVVEARGSNTTKDGRPYNNA
                     YCFVIELAGGKLQAITEYMDTELVSAVLGERVAS"
     gene            complement(661..1479)
                     /locus_tag="VE783_10180"
     CDS             complement(661..1479)
                     /locus_tag="VE783_10180"
                     /inference="COORDINATES: protein motif:HMM:TIGR02777.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase ligase N-terminal
                     domain-containing protein"
                     /protein_id="HYX53806.1"
                     /translation="MALETYNRKRQFDQTPEPKGDLGRADQHRFVVQKHRASHLHYDF
                     RLEMDGVLKSWAVPKGPSLDPADKRLAMQVEDHPVSYFSFEGIIPEGNYGAGTVMVWD
                     MGTWEPLGDPDAMLAKGDLKFRLQGKKLKGEFVLAHMRSRRPGSKGTEWLLIKKRDEA
                     VQEGFDVDDLDYSVTTNRSLAEIAGDTGSREWQSNRKAAVKKGAEWLFAGKEPKGAKR
                     PSARNEDKPAKRPASRSSGRSTKSTATTKRATAKAKPRTASREKRTGRGRKRAA"
     gene            1526..2206
                     /locus_tag="VE783_10185"
     CDS             1526..2206
                     /locus_tag="VE783_10185"
                     /inference="COORDINATES: protein motif:HMM:NF013077.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitroreductase family protein"
                     /protein_id="HYX53807.1"
                     /translation="MAKIPGEKLLSEVIQERRATPSFEEVPIHSADLEKIVRAGLAAP
                     SAYNLQPWRFILVRDREQKKKLRAASFNQPKVEEASVVVVACGDPEGWKHGDLDVVLD
                     ISKDHGFGSDEQREKIRGAVTGFLSSAPGNAGGLGPDYAVWVNRHVMIAFTTMMWTAE
                     TLGYDTAPMEGFEEDKVKALLRIPDRVRVVALLGIGRRKGPDKAYAGRFNPERVVFAD
                     EWGKKIDF"
     gene            2196..2720
                     /locus_tag="VE783_10190"
     CDS             2196..2720
                     /locus_tag="VE783_10190"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53808.1"
                     /translation="MISNPSARRSAQEVFFFVGYALLLLIIGMGFAARSGWAQDAKLA
                     PSPVPTPQPFTARAASPLLLQIRDGLQTRDVRRMLAAFDLSAMPDAALFQQQLLSFFS
                     HTETIRVHLNLVNATGDQEKGTAEVDAELEADLGDNTVPVHKQARLKFSAALNARTWR
                     FVDVQPRPFFSTQP"
     gene            2726..3181
                     /locus_tag="VE783_10195"
     CDS             2726..3181
                     /locus_tag="VE783_10195"
                     /inference="COORDINATES: protein motif:HMM:NF012514.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX domain-containing protein"
                     /protein_id="HYX53809.1"
                     /translation="MKREYPDRPIVGVGAVIVHQSKVLLIKRGAPPLMGEWSLPGGVV
                     ELGETLRAAAEREALEETGLVVQAGEVLEVFDRIVPGSEGRPQYHYVLVDFLCQVEGG
                     ELRAGGDAADASWATKDELAKFKLERPAREVILKAFAACCNPERSEGTL"
     gene            complement(3250..3750)
                     /locus_tag="VE783_10200"
     CDS             complement(3250..3750)
                     /locus_tag="VE783_10200"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53810.1"
                     /translation="MNKIRLWVGFLFFIAVGSAAAQRQKQPPALLQDAVYCATTDHGG
                     WLNPQLHKDKKVRVSFTIDRKSYEGKEHLVLVFNQSDSSAQAFDIIVTRSNHALNLHM
                     VNNAGFKRISREFEWNYPPLGGVWTQEHFEQNIRNANSSGTYLIDPALSGKVKGVSCS
                     SYARVK"
     gene            complement(3787..4398)
                     /locus_tag="VE783_10205"
     CDS             complement(3787..4398)
                     /locus_tag="VE783_10205"
                     /inference="COORDINATES: protein motif:HMM:TIGR00421.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016831 - carboxy-lyase activity [Evidence
                     IEA];
                     GO_process: GO:0006725 - cellular aromatic compound
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UbiX family flavin prenyltransferase"
                     /protein_id="HYX53811.1"
                     /translation="MQNSSHSTAHVLTVAATGASGALFTRALLQLLEREQRVSCVNFI
                     ASDNALRVFAEELAIQGRSNLVQQVLGAKSEKIRHQNFDDIGANIASGSNPTNGMVIL
                     PCSVGTLAGIAHGTASNLIQRAADVCLKEKRPLVLCVRETPLNRVHIRNMDLAAEAGA
                     TIYPLIPTFYNHPQTFDAMAHQFACRLLAFMGLPQDDAYVWGR"
     gene            4500..5978
                     /locus_tag="VE783_10210"
     CDS             4500..5978
                     /locus_tag="VE783_10210"
                     /inference="COORDINATES: protein motif:HMM:NF016103.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ChaN family lipoprotein"
                     /protein_id="HYX53812.1"
                     /translation="MRARRRTAAQQLGLEQVQREIKATDPHVRLKYLREFSEAFRDYQ
                     HPLTAAELQQRMKRANVLLVGDYHALPACQSYTADLLEQLTLDGKPVVLAIEMVFSRD
                     QHLLDRWLRDEMSDDELRSALRYDVEWGYEWKPFIDLVQRARRHSCAIYGIDCATRGN
                     MRKIGKRDRHAAGQIAAIRRAHPEARVVVLFGEAHLAPTHLPLYLKTARPKDRVLTVL
                     QNVDELYWRSAGESPDTVPAVQVNEDTVCVFNATPLEKYESYRIYIERWRQPEAEATQ
                     PALAPTFYNLVDTLLRSLGLEQYYPAAGNHPSTLVEEYPEVQWRGDEAEFAALMEQRN
                     IVPAERGTALDKLRRNGCVYLPQKNLLLIERFNMWAAAEEAVRFVQTECRGARSLLGP
                     WAAASPEHHFYFSVMEKALVTFGARVLNPHAPTTTDPHAGSLEKLGVSLGAAMHEAYL
                     DGVLTRSHLRALFFRKIHLPGAAKKAYAEVAKKIVAHRALKN"
     gene            6079..6825
                     /gene="larB"
                     /locus_tag="VE783_10215"
     CDS             6079..6825
                     /gene="larB"
                     /locus_tag="VE783_10215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018281842.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nickel pincer cofactor biosynthesis protein
                     LarB"
                     /protein_id="HYX53813.1"
                     /translation="MDQSSLLKLLEQVRDRRVSPDNAVSRLRHMPFEDLGFAKVDHHR
                     RLRAGMPEVIFSRGKTPQQVAQIFKKLAQHGGNVLATKAERDHFRAVKKAVPKAEYHE
                     LAQAAVLRREKTIYGKGTIAIVSAGTSDIPVADEALVTAEIMGNDVVPLYDVGVAGIH
                     RLLANRQVIDKARVVIVCAGMEGALPSVVGGLVSVPVIAVPTSIGYGASFNGLAALLG
                     MLNSCASNVSVVNIDNGFGAGYVASMINRL"
     gene            7008..8087
                     /locus_tag="VE783_10220"
     CDS             7008..8087
                     /locus_tag="VE783_10220"
                     /inference="COORDINATES: protein motif:HMM:NF019886.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma factor-like helix-turn-helix DNA-binding
                     protein"
                     /protein_id="HYX53814.1"
                     /translation="MNIHVSYKSGKTPDVEREFQVQIQKLERRLRVFNPDLIHLKAIV
                     DAENAEGASTSINLRLPSGQLAAQKSGAALVPAVKAAFADIVSQLTRHKELLRGDWAR
                     KRRQAGRGEVIEPAVPFEQTFASVPAQEQPMAGAPQHANGGGNSELQSWISANIGKLN
                     DFIEQELRFRIANGQIREDHIAPEEVLDEVMVTALSQEDGGTSLLLSSENWFHGLAIQ
                     AIRRLMEDNADLAEVSLEAPRRAQNVSGSDENLLQYHQPDDRLQEENLIRDEMARTPE
                     EIVAGEEMVAQLDIVLHEVNAADREAFILFTLEGFTIEEIARLSDRSPEQVRKSIQHA
                     RELVQQRLPEQNQYRRRLLQRSRVA"
     gene            8124..>8485
                     /locus_tag="VE783_10225"
     CDS             8124..>8485
                     /locus_tag="VE783_10225"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53815.1"
                     /translation="MISREELRQLAQHESSHGCAISFYFQPQTPQDRSHREEAIVVKD
                     LVRDALRRAERNGNNPPLREDLQRILETAEQLYGNHSRGKVIFACRELGIWHELDVLP
                     RLGRTQLIVNSRFHLKPLV"
BASE COUNT         1736 a         2422 c         2513 g         1814 t
ORIGIN      
        1 gagtaactat ttgaattgtc aaaaagcgcg gccacaccaa ctccgccccg gtccctcgcg
       61 acagggcagc cgtgaagacg aattaattat accgtatttt attcgccttg tcaagtacga
      121 acggggcaga agattgctcc cattcttagt gttctttatg cttctctgtt cgaggattga
      181 aagaggagac gatgcgtgca gaggagaaca agcagatcgt gcagagcatt tttactgaac
      241 tggcccaggg caattctcgc ccgctggtgg aagccatggc ggacgacttc agctggactg
      301 tcaccggcag caatcggtgg tcaggcacat acaaggggaa acaggctgtg ctgaacgatg
      361 tgctcgggca gctgcgcgcc cgaattgaag gtcgaatcaa gaccatcgcg caccgtttca
      421 ttgccgaggg tgatttcgtg gttgttgagg cccgcggaag caacaccaca aaggacggcc
      481 gcccttacaa caacgcgtac tgcttcgtga ttgaactcgc gggaggaaaa ctccaggcga
      541 ttaccgagta catggacacg gagttggtaa gcgccgttct gggggagcga gtagcgtcat
      601 aaaccaggct tcaatccagc atcgattcgg agcccatctg gtatgcttac gaggcgttgc
      661 tcaggccgct cgtttgcgtc cccggccggt tcgcttttca cgagaagctg ttcgcggctt
      721 ggctttagca gtagcgcgct tcgtggtcgc ggtggatttt gtgcttcttc cggatgatct
      781 ggatgctggc ctcttcgctg gcttgtcttc attgcgtgct gaaggtctct ttgccccctt
      841 cggctccttt ccggcgaata gccactccgc acccttcttc accgctgcct tgcgattgct
      901 ctgccattcg cgagagccgg tgtcgccggc aatttccgcc agactgcgat tggtggtgac
      961 cgagtaatcc agatcgtcga cgtcgaagcc ctcctgaaca gcttcgtcgc gctttttgat
     1021 cagcagccac tcggtgcctt ttgagccggg ccggcgcgag cgcatatgcg ccagcacgaa
     1081 ttcgcccttg agctttttgc cctgcaggcg aaatttcaaa tcgcccttgg ccagcatcgc
     1141 atcgggatcg cccagtggct cccaggttcc catgtcccac accatcaccg ttcctgcgcc
     1201 gtaattgcct tcgggaatga ttccttcaaa gctgaagtac gaaaccggat gatcttccac
     1261 ctgcatcgcc agccgcttgt ccgccggatc aagcgacggg cccttgggca cggcccagga
     1321 cttgagcacg ccatccatct ccaggcggaa gtcatagtgc aggtgcgagg cgcggtgctt
     1381 ctgcaccaca aagcggtgct gatcggcgcg gccaaggtcg cccttgggtt cgggcgtctg
     1441 gtcaaattgg cgcttgcggt tgtatgtttc tagagccacc aagatttaga tgcgctttgt
     1501 acgtgacacc gcgcaggaga atagcatggc caaaattccc ggcgagaagc tgctgagtga
     1561 ggtgattcag gagcgtcgcg ccacccccag ctttgaagaa gtcccgatcc acagcgctga
     1621 cctcgaaaag atcgtgcgtg ccggactggc cgctcccagt gcctacaatc tgcagccgtg
     1681 gcgctttatt ctggtgcgcg accgcgagca gaaaaagaag ctgcgtgccg catccttcaa
     1741 ccagcccaaa gtggaagaag ccagcgtggt ggtggtcgcc tgcggcgatc ccgaaggctg
     1801 gaagcacggg gatctggacg tggtgctcga catttctaaa gaccatggct tcggcagcga
     1861 cgagcagcgg gagaagatcc gcggcgcggt cacgggtttt ctgagcagcg cccctggtaa
     1921 tgccggcggc ttggggccgg attatgctgt gtgggtgaac cggcacgtca tgatcgcctt
     1981 taccaccatg atgtggacgg cggagacgct cggctatgac acggctccga tggaaggctt
     2041 tgaggaggac aaagtcaaag ccctgctccg cattcctgat cgcgtgcgcg tggtggccct
     2101 gctgggaatt ggccgccgca aagggccgga caaggcctat gccggacgct tcaatcccga
     2161 acgcgtggtc ttcgccgacg agtgggggaa gaagattgat ttctaacccc agcgcgcgac
     2221 gctccgcgca ggaagtattt ttcttcgtgg gctatgccct cttgctgctc atcatcggta
     2281 tgggctttgc tgcgcgctca ggctgggcac aagacgccaa gcttgctcca tcgccagttc
     2341 ccacccctca gccgttcaca gccagagctg cctcaccgtt gcttttgcaa attcgcgatg
     2401 gccttcagac acgcgatgtg cggcgcatgc tggctgcttt tgatttgagt gccatgcccg
     2461 atgctgctct gtttcagcag caattgcttt cgtttttctc gcacactgaa accattcgcg
     2521 tgcacctgaa tctggtgaac gccacaggtg atcaggaaaa gggcacagca gaagtggatg
     2581 ccgaattgga agccgatctt ggcgataaca ccgttccagt gcacaagcag gcacggctga
     2641 aattttcggc ggcgttgaat gcccgcacgt ggcgctttgt cgacgtgcag ccacgtccct
     2701 tcttcagcac gcaaccctga cttctatgaa gcgcgaatat cctgaccggc cgattgtggg
     2761 cgtgggcgct gtgatcgtgc accagagcaa agttctgctg atcaagcgcg gagcacctcc
     2821 gctcatgggt gagtggtcgc tgcctggtgg agtcgtggaa ttaggcgaga ctctgcgtgc
     2881 cgctgcagaa cgcgaagccc tggaagaaac cggactggtg gtgcaggcgg gcgaggtgct
     2941 ggaggtgttc gatcggattg ttcccggcag cgaaggccgt ccgcagtatc actacgtgct
     3001 ggtggatttc ctctgtcagg tggaaggcgg cgaactgcgc gcgggcggcg atgctgccga
     3061 tgcctcatgg gctacgaagg atgaactggc aaagttcaaa ctggaaaggc cggcgagaga
     3121 ggtgatcctc aaggcatttg ctgcttgttg taatcccgag cgcagcgagg gaaccctata
     3181 gccacaaatg ctctttctac tatgaggaat cgagccggca gccctgaggc acgcagaaaa
     3241 aacggatttc tatttcactc gcgcataaga agagcaactc acgcctttta ctttgccgct
     3301 caaggccgga tcgatcaaat acgtccctga gctgttcgca ttccggatgt tctgctcgaa
     3361 atgttcctga gtccaaacgc ctccgagtgg cgggtaattc cattcgaatt ctctggaaat
     3421 tctcttgaac cctgcattgt tcaccatgtg cagattcagg gcatgatttg accgcgtgac
     3481 aatgatgtcg aaagcctgtg ctgaagagtc actttggttg aagaccagca ccaggtgttc
     3541 tttcccttca tacgatttgc ggtcaattgt gaaactcacc ctcactttct tgtccttgtg
     3601 caactgcgga ttaagccagc ctccatgatc ggtagttgcg cagtaaactg cgtcctgcag
     3661 gagcgccgga ggttgctttt gcctttgcgc agccgcggat cccactgcta tgaaaaagag
     3721 aaatcctacc caaagccgga tcttattcaa ggttttctcc gtgtctccgt gcctccgtgg
     3781 tgaagattac cttccccaca catacgcatc atcctgcggc aatcccataa acgccagcag
     3841 gcggcatgcg aactggtgcg ccatcgcgtc aaaagtctga ggatggttat aaaacgtggg
     3901 aatcagtggg tagatcgttg ctcccgcttc tgcagccaaa tccatattac ggatgtgcac
     3961 gcgattcagc ggcgtttcgc gtacgcacaa aaccaaaggc cgtttttcct tgagacatac
     4021 atccgcggcg cgctgaatca ggtttgacgc ggtcccgtgc gcgatgcccg caagcgtgcc
     4081 tacgctgcag ggaagaatga ccatgccgtt ggtgggattc gatccgcttg cgatatttgc
     4141 cccgatatcg tcgaagttct ggtggcgtat cttctctgat ttcgcgccga gcacctgctg
     4201 caccaggttg ctgcggccct gaatggccag ctcctcggca aagacgcgca gcgcattgtc
     4261 cgaggcaatg aaattcacgc agcttacgcg ctgctcacgt tccagcagct gcagcagcgc
     4321 gcgtgtgaac agagctccgc tggcgccggt ggcggccacc gtaagtacat gggctgtcga
     4381 atgggatgag ttctgcatct aacggtataa gctctttttc gcaaacctgt cacgaaaact
     4441 ttttgagcat agggtttggg cttgcggctc gtcaagccgg tatgagaagt gtcttcgcaa
     4501 tgcgtgctcg ccgccgtacc gcggcccagc agcttggcct ggagcaggtg cagcgcgaaa
     4561 tcaaggccac cgatccgcac gtccggctga aatatctccg cgaattcagc gaggctttcc
     4621 gcgattatca gcatccgctg accgcggcag aactgcagca gaggatgaag cgcgccaatg
     4681 tgctgctggt gggcgattat cacgccctgc ccgcctgcca gagctacacg gctgacctgc
     4741 tcgagcagct cacgctcgac ggcaagccgg tggtgctcgc cattgaaatg gtcttcagcc
     4801 gtgatcaaca cctgctggac cgatggctcc gcgatgaaat gtctgacgac gagctccgct
     4861 ctgccttgcg ctatgacgtg gagtggggct acgagtggaa gccgtttatt gatttggtgc
     4921 agcgggcaag acgccattcc tgcgcaattt atggtattga ctgcgctact cgcggcaaca
     4981 tgcgcaagat tgggaagcgc gatcggcacg ccgcgggaca gattgcggcc atccgcaggg
     5041 cgcatccgga agcgcgcgtc gtggtgcttt ttggcgaggc ccacctggcg cccactcatc
     5101 tgcctttata tttgaaaacc gcgcgcccta aagatcgcgt gctgactgtg ctgcagaacg
     5161 ttgacgagct ttactggcgt tcagcgggtg aatcgccgga caccgtgccc gcagttcagg
     5221 tgaatgagga cacagtttgc gttttcaatg ctactccgct cgagaagtac gagagctatc
     5281 gcatttacat cgagcgctgg cgtcagcccg aggccgaagc cacgcagccc gcgcttgcgc
     5341 ccacttttta caacctggtg gacacgctgc tgcgctcgct tggtctggag cagtactatc
     5401 ccgctgccgg taatcacccc agcacgctgg tggaggaata ccctgaagtg cagtggcgcg
     5461 gcgatgaagc agaatttgcg gcgctcatgg agcagcgaaa cattgtgcca gcggagcgtg
     5521 gcaccgcgct cgataagctg cgccgaaacg ggtgtgttta tctgccccag aagaatttac
     5581 tgctcatcga gcgtttcaat atgtgggcag cggctgaaga agcggtgcgc tttgtccaga
     5641 ccgaatgtcg cggcgcgcgc tcgctgctgg ggccatgggc ggcggcatcg ccggagcatc
     5701 atttctattt cagtgtcatg gaaaaggcgc tggtcacctt tggggcccgc gtcctgaatc
     5761 ctcatgctcc caccacaacg gacccacacg caggttcgct ggaaaagttg ggagtgtcac
     5821 tcggggctgc catgcatgaa gcctatctgg atggagtgct cacgcgcagc cacctgcgcg
     5881 cgctcttctt ccgcaagatc cacctgcccg gagcagccaa gaaggcgtac gccgaggtgg
     5941 caaagaagat cgtggcacat cgtgcgctga agaattagca gttgccgccg ggctccgctc
     6001 gcccgagcta agaattcaat ctcgtgtttg cgatcccccc agcgtttctg cgcaagtgtt
     6061 accctaaacg gttcgcttat ggatcaatct tcgcttctga agctgctgga gcaggtgcgc
     6121 gaccggcgcg tctcgccgga taacgccgta tctcggttgc gccacatgcc tttcgaagac
     6181 cttggcttcg ccaaagtcga tcaccatcgc cgccttcgcg ccggcatgcc ggaggtgatt
     6241 ttctctcgag gcaaaactcc gcagcaggtg gcgcagattt tcaagaagct ggcgcagcac
     6301 ggaggcaatg ttctggccac caaggcggag cgcgatcact ttcgcgcggt caaaaaagca
     6361 gtgccgaaag ccgagtacca cgagctggcg caagcggcgg tgctgcggcg cgagaaaaca
     6421 atctacggca aagggacgat tgcgatcgtc tctgccggaa cgagcgatat cccggttgcc
     6481 gatgaagctc tggtgaccgc cgagatcatg gggaacgacg tggtgcctct ttacgatgtt
     6541 ggagtcgccg gcattcaccg gctgctcgcg aatcggcagg tgattgacaa ggcccgtgtt
     6601 gtgatcgtct gtgccggaat ggaaggtgct ctgcccagcg tggtcggcgg tctggtgagc
     6661 gtgcccgtaa ttgccgttcc caccagcatc ggctacggcg catctttcaa cggcctggca
     6721 gctctgctgg gtatgctgaa ctcctgcgcc tctaatgtaa gcgtcgtaaa tatcgacaat
     6781 ggcttcgggg caggatacgt agccagcatg atcaaccggc tttagtcgaa acggccgcat
     6841 tttgactgct cccaatagca gccaaatgca agctttttat tacgatcggc aagaaatttc
     6901 tcttgcaaca ctcctacttg ccgcagcgtc tcattggcag gtgtacaatt tgcgggtagc
     6961 gagggccttc ggaccttctt tgggaccttc tcccagccga ggcgcaaatg aatattcacg
     7021 taagctacaa gtcaggcaag acgcccgacg tagaacgcga attccaggta caaatccaga
     7081 aactcgaacg caggctgcgc gtcttcaacc ctgatttgat ccatctaaaa gccattgttg
     7141 acgcggaaaa cgccgaggga gcgtccacat cgatcaattt gcgtctccca tcggggcaac
     7201 tggcagccca gaaatccggc gctgctctgg ttccggcggt gaaagcagcg tttgctgaca
     7261 tcgtctccca gctcacccgc cacaaagagc tgctgcgtgg cgattgggct cgcaaacgcc
     7321 gtcaggctgg acgcggagag gtaattgagc ccgcggttcc gtttgagcag acgtttgcgt
     7381 ctgttcctgc ccaggagcag ccgatggctg gcgcgccgca gcacgcgaat ggcggcggca
     7441 actccgagtt gcagagctgg atcagcgcga atattggtaa gctgaatgac tttatcgagc
     7501 aggagctgcg cttccgcatc gcgaatgggc agattcgcga ggaccacatc gcgcccgaag
     7561 aagtgctgga tgaggtcatg gtgacggcgc tgtcgcagga agatggcggg acatcgctgc
     7621 tgctctcatc ggagaactgg ttccacggtc tggccatcca ggcaatccgg cgattgatgg
     7681 aagacaacgc tgatctggca gaggtgtcgc tggaagctcc gcgccgcgcg cagaacgtct
     7741 ctgggagtga cgagaacctg ctgcaatacc accagcctga cgatcggctg caggaagaga
     7801 acctgattcg cgacgagatg gcgcgcacgc cagaggagat tgtcgccggc gaagaaatgg
     7861 tcgcccagct cgatattgtc ttacatgagg tgaatgccgc ggaccgggaa gctttcatcc
     7921 tgttcactct ggaaggcttc accattgaag agattgcgcg gctttctgac cgatcacccg
     7981 agcaggtccg caaatccatc caacacgcgc gagagctcgt gcaacagcga ttgccggaac
     8041 agaaccagta ccggcgcagg ctgctgcaac gctcgcgcgt ggcctgattt tatttccttc
     8101 taaaaaggcc gaggaggtaa gtcatgattt cccgtgagga acttcgccag ctggcccagc
     8161 atgaatcgtc gcatggctgc gccatcagct tctatttcca gccgcagacg ccgcaggacc
     8221 gttctcatcg cgaagaggcg attgtggtca aggacctggt gcgcgatgct ctgcggcgtg
     8281 ccgagcgcaa cggcaacaat ccgccactgc gtgaagacct gcagcgcatc ctggaaactg
     8341 ccgagcaact ttatggcaac cactctcgcg ggaaggtgat tttcgcgtgc cgggagcttg
     8401 gcatctggca cgagctggac gtgctgccgc gcctcggacg cactcagctg atcgtgaact
     8461 cgcggttcca cctgaaaccg ctggt
//
LOCUS       DASQYP010000318        38572 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_121743, whole genome shotgun sequence.
ACCESSION   DASQYP010000318 DASQYP010000000
VERSION     DASQYP010000318.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 38572)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 38572)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..38572
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_121743"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            264..339
                     /locus_tag="VE783_10230"
     tRNA            264..339
                     /locus_tag="VE783_10230"
                     /product="tRNA-Lys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:297..299,aa:Lys,seq:ctt)
     gene            complement(466..651)
                     /locus_tag="VE783_10235"
     CDS             complement(466..651)
                     /locus_tag="VE783_10235"
                     /inference="COORDINATES: protein motif:HMM:NF014470.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0015031 - protein transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocase TatA/TatE family
                     subunit"
                     /protein_id="HYX53816.1"
                     /translation="MFLRDLLIPSHLLFLLLLMVVFFGGKKLPQFGKGLGDGIRQFRH
                     AVKDNLKLGGSEPNDLA"
     gene            complement(752..3544)
                     /locus_tag="VE783_10240"
     CDS             complement(752..3544)
                     /locus_tag="VE783_10240"
                     /inference="COORDINATES: protein motif:HMM:NF013955.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IPT/TIG domain-containing protein"
                     /protein_id="HYX53817.1"
                     /translation="MRLLQKANARRLWPEYKYVPGDERTGKKEAVMKYRMSETSIEQK
                     IPENRVSGNGSRLTRSTFFVAALLIGLVAKGGAQTDGIMVLQNNTTPRGGVWLANTTP
                     GTPPGGHYWQSDGVLGICRIDPLPGGNPPWQMTNCQATAKSAGQVVTATPAAGMKGLP
                     SGAVFVFVADASTKSISIVRFVFDPSTEKLSANLTFQVQNPTSVGGGAGGGRPVAVAM
                     GPNGTDLYVGYLKSGDIMKVANATSITSGTPPVTKIGTTSDGRGVNSLLFLNNNLYVA
                     ESGGNGLSMIPDPQGITRMACNSASPCKASTFNPQISFFPGGLATDGTNLFVGDSPIT
                     TAGSILRWNPMSGALSTYSAYVPAYTSSYDNQTRNQYYNPFSLGFTPSGDLMVGDDFS
                     ASLVVAVAPTLQGHIWRVAAAPTPPTITSIAPNNGPTAGGTVITVTGTGFDTAPGATQ
                     IYIGANQGVSPSCASVTSCTVTAPAGSGTVDVRAVVNGEQSATSAADLFTYNAPPPVG
                     GGPAVTSISPASGLLGGATSVKISGANLAGATSITFGPNAGTGINCAADGSSCTVFSP
                     AGTGTVDVQVTTPGGTSGIVSGDRFSYVNPTATLYAWGITAPKGGMLFLPGSLGGHFW
                     TSDHVNGFCREDPVPGTTINAINYSVCDDGSIGSPGQAVYDPRVNADGVTHYIYVPDN
                     AVKSVAIWRLTYNPTTETLQGSPEGMIPLADVRTLKPNGMALGADGNLYVTDLTEANI
                     RQVTNPNGDPRSQTVGIVAVTGDGRGANGTIGVIGNRVYISENRAASWFDITTCPPNA
                     ATPCATNPLPMPSGVFIAGVATDPVNGFVYAADSPGGANANIWRYNVATNTTALYLQG
                     GVVPATGSPNATVWCSLTCTRPFDPNLTPGGTAGFSFAFGLYVDTTNGSLYITEDPTA
                     GNRGGRGRAWVAPLVP"
     gene            complement(3655..6057)
                     /locus_tag="VE783_10245"
     CDS             complement(3655..6057)
                     /locus_tag="VE783_10245"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53818.1"
                     /translation="MRRNTSGKLAITCALLLALSGYAQRPSTPPSPAQVPASQGGVAP
                     FDMIGIMQFASVDTQCQRNSNPTPQNPPQPAGCKASGGWIQINGHVIRVPQNTILQMP
                     ANTLTWEEVFEYNPAGSGDETGMALTDGSRLPGTFEAHVQGNVVNGTYIAGLIFLSQQ
                     SLNSSQGFIESLDYANGIMVVNGTKIQINDPAGKFSIGKSPDVRFSIDEDNPTVRAET
                     AFPMCIPRQDPAMGDDPLCPQKNRPRDSSGNFVMNYTMDPRGAFPSPASPNPTDPTVF
                     APFEVGDYVTYAGTLLDYNGTRILSAHTVIANVGIYTTPGDVPAYVAIDVLLQGAPGI
                     PNPAFPQEATAKARVEGFSTDPSRPVDIFAVDQDCNGVVTDRAPWAFEFTVEPGPPTL
                     GKKGRFRFRPTGGSFLPPSRVVGVQIDYPPPAVFNQKLGIMAGRYQAPNFTFIFPENL
                     AVGDPPVPLNFNDLPFLVNGSGPWGFGNQPIGQLNPWPGGSAPQMTCTAVPGGTPPPP
                     TATAVASYTASATPIVAGTTVTLSANGSTPSNGPFAWSQLANSGDPTIALSTTNAMTA
                     TFTAPTVATPTNLTFQVSVGGGNSTTPATATVSVPIVPPAAPAPPAVSASAAPASPVA
                     SGTSVTLNASGVDPAGGTLSYTWLAPQGVTLSASSGDGSQQKFLAPTVPAGSAPSTFS
                     FTVTAKSSASGLSSTATVNVTVNPILDVITITSAVYRTLKGSMTVNVTDITPGIKLTC
                     TLDITNPATGKPWTGVMGPAVPAAVGNYSIVFTGVNQPTRVTVTSTAGGTASSGVTRV
                     RQ"
     gene            complement(6126..8525)
                     /locus_tag="VE783_10250"
     CDS             complement(6126..8525)
                     /locus_tag="VE783_10250"
                     /EC_number="1.11.1.5"
                     /inference="COORDINATES: protein motif:HMM:NF015131.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c peroxidase"
                     /protein_id="HYX53819.1"
                     /translation="MNASKHWPLNLLRTCTIALAIVAALGYLARVKAQSGTAPTGNVI
                     TLRPLAALSSVPIPDVPGIGDYVANKQAAIVLGKTLFWDMQAGSDGVQACASCHFNAG
                     ADSRVNNALSPGLKAGDSTFQMGVPLNGKIYPNYTFNAGTPGAGFGGYHDGDFPLHKQ
                     GDVNTRNNPLSDVNDTVGSQGVFSTSFDRVRLGSSFEKQTISSDAVFSYPDPANSANT
                     INTRRVEPRNTPSAVNAIFNNRSFWDGRAQNTCNGANPFGERDTSSHFYSASSPSAPL
                     TSGLVRLQNSSLCSQALGPPGSNFEMSASNRTFRDIGTKLLFLRPLSTGKKSPLGAQK
                     VDPTDSVLGSTSVKNGRGLQPSYVDLIKAAFQPKWWQSSGQICVPANGGAEIVIKMGK
                     PCPTGTTGYFQMEYNFSLFWGIAIQMYESTLVADQTPLDNYLKTQKTVSITGDNVKNW
                     YSVQLAPGVDPYTVSVVELNPQLDSSDQEVFAFDDGAGNVSGEGVTQASIDYASGTLS
                     IQFDVPPPAAFPINISYSVGPTPLTQAQLRGLLTFQTKGRCINCHGGPELSNASVGNV
                     SIQPLERMVMGDFNVRVYDNGFYNIGVRPGKEDISLGDVDGAAGQPLSQSELLRERVC
                     NDPGFSMMIPGRPGDSLPAAPLSCWDDIARTGFFKTPMLRNIALTAPYFHNGGQLTIE
                     QVIEFYNRGGDFPDGFDQIPLIDPNIVPLGLTMQEKTDLADFLRNALTDPRTVNQSAP
                     FDHPELFVPNGHPADANGYPVQNDPKHPGQATDRMLQIPAVGRNGGTPLRTFLQNLNT
                     H"
     gene            complement(8863..9909)
                     /locus_tag="VE783_10255"
     CDS             complement(8863..9909)
                     /locus_tag="VE783_10255"
                     /inference="COORDINATES: protein motif:HMM:NF014667.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SCO family protein"
                     /protein_id="HYX53820.1"
                     /translation="MKRRKSIAGALSVACSLAIAALWLCRAPVAAAFDNQHWGSNYFP
                     NVELTTQDGKKVKLYDDLIRNKIVVVDLIYTHCVDACPLETARLAQVQKLLGDSMGKD
                     IFFYSITIDPKRDTPEALKAYADKYHAGPGWLFLTGKKDDIELVSKKLGLYSEPDPND
                     RDGHTPSVVVGNERTGQWMRNSATDNPRFLAMLIGDWLNNWKYSASGNTKQQTYENAR
                     PIKLEAGQYIFSTHCAACHTVGHGDKIGPDLMGVTSARERKWLLRFIQEPDKVLDEKD
                     PTAIALFRRYKEVRMPNLRVHTVDAEQILNYIARQSAKATDDKQSRGAVASTRNTSGQ
                     GATGGLSRSISANK"
     gene            complement(9975..12245)
                     /locus_tag="VE783_10260"
     CDS             complement(9975..12245)
                     /locus_tag="VE783_10260"
                     /inference="COORDINATES: protein motif:HMM:NF019351.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005507 - copper ion binding [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="multicopper oxidase domain-containing protein"
                     /protein_id="HYX53821.1"
                     /translation="MSIFYLPPNASKRRQRDAEQARQNRAEILKAYSQGQVSRRDLLK
                     WGLITSGGAIASIGGLSPFVAFGDGGSGSGGSSGSSTSSSIPTGMPASPLFGVQAFTT
                     AMPRFDVVSRNPVSSLNPYPTAQANQTQQPLNPALVNGQSGLTGPIEGRPPGAIWAHQ
                     GFDKFPPQVAVEMTQGGATANSSYNPGVASNMNSGIDPTLPLPLKFHPGLPTQDSNSV
                     WTFNGTIPPKLVIGRYGEPILFRHHNGLPFDVTQNNGFGRNTISTHEHNGHHGAENDG
                     FTGAYFFPGQFYDYHWPIVLAGHFTVNTDATDPLACSPDDSGGTNKVPGDWHETMSTH
                     WFHDHMFSFTSQNVYKGNAAMFNIYSGIDRGNETISDGINLRLPSGSAKSWGNLDYDV
                     NLMLADKAWNSNGQLFMDIFNFTGFLGDAMTVNLTYKPYFEVEARKYRFRILNASVSR
                     FFKVCLSDGSEMIQICNDGNLLPHPVKLTQLDEQGIAERYDIVIDFSRYSVGSKVWMV
                     NLCEHQDGAKPAKDRTLSDALGGKSSDPCVGKFLEFRIVRKPAVSDQSQVPSTLIPNP
                     DLSNVPVARERTFVFGSGASQNQSDPITSFITGSGGKPGPWGVQVDGGKMLNADFGRL
                     SAAPKFGTREIWHLVNGGGGWDHPIHIHFEEGQILQRTVLGTDVGVPDWEKGRKDVYR
                     LRPNGSVTLTMQFRDWGGMFMEHCHNTVHEDNAMLVRWELDDGGQPFLRPLPTPIPHP
                     TGVTFENPDEIAPTAY"
     gene            complement(12610..13689)
                     /locus_tag="VE783_10265"
     CDS             complement(12610..13689)
                     /locus_tag="VE783_10265"
                     /inference="COORDINATES: protein motif:HMM:NF025885.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54 dependent transcriptional regulator"
                     /protein_id="HYX53822.1"
                     /translation="MSGLVSQSTAARLGAALPELNLLIGCTPAMAQLHERLQKLRQTD
                     IPVLITGESGTGKGLLARLLHSCSHAHNSDFEQINCAALPANLVESELFGYERGAFTG
                     AVSSRKGRVEMTSKGTVFLDEIGELDLEIQAKLLHLLQDGTFCRLGSHEPRSTKARFV
                     FATNRDLEEEMLEGNFREDLYYRIEGLTLHLPPLRERVEDLPALVRYFVAHYNAAYRT
                     EAEMPSSEVINRLQEYHWPGNIRELENVVRRYVVLGSPTSIMADLTQREREVFQFAIP
                     PNGKVSLKEISRQAVRQVERQVMLKALESNGWKRKKTARMLQISYRALIYKLDEAGIC
                     CRNYQQCNVTGDCKSAEQDQRGAAA"
     gene            14158..15009
                     /locus_tag="VE783_10270"
     CDS             14158..15009
                     /locus_tag="VE783_10270"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing sensor histidine kinase"
                     /protein_id="HYX53823.1"
                     /translation="MASRSSVAARAACPDPALHERPRQLSERVEREVFQRTLVLAAVA
                     HELKTPLALLEGYTDFLLGNHAGPLTEKQQAVVSEMQQNTERLQRFVQSFLSFSALES
                     GRVEANKEPGNINRCVAEVVKNWSSRFADRGTRLDVVVDPELPDTWFDCLKVQHVISN
                     LLDNALKFAPEGGQVRISTGLHHWERRSVLQQLANAHERRTAEPQRSHNCVRIDVSDN
                     GPGIAPEYHHEIFEEFLQLQPRAGVEGVGLGLAIARRLAEAHGGKIWVESSLGNGSTF
                     SVLLPNS"
     gene            15022..16461
                     /locus_tag="VE783_10275"
     CDS             15022..16461
                     /locus_tag="VE783_10275"
                     /inference="COORDINATES: protein motif:HMM:NF025885.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54 dependent transcriptional regulator"
                     /protein_id="HYX53824.1"
                     /translation="MNVVAGTPSKARVLVVDDEPGMLLYTSTLLETCNYAVQTARSGP
                     EALLKLQQQRPDLMLLDVSMPEMNGLETIQAARRLYPDQRVVMVSCVSETSTVVQAMR
                     LGALDYMTKPIYKAELEAVLARALSKGSLADEEIPTIHFTAVTDQENVDRIDDDMFFL
                     AASPAMKQLRAQLSIISKVDVPILLLGESGVGKEVMARLIHNLSPRSGKPFVKVNCAA
                     LPLDLLESELFGYEAGAFTGATRQKPGKFEIANQGTIFLDEIGEMNPLLQAKLLHVLQ
                     DGEFSRLGGRGSVRADVRVLAATNIDIQRSIAQRTFREDLYYRLNAFTLNIPPLRERR
                     EEIPPLLQQYGTRYAKRYGILQPKYSQSLQDACLRYHWPGNLRELGNFVKRFIVLQDE
                     GLAIAELKQKGLPDAAQPGDGAFGSGFPNGLKTMVRNHRDELEIKVLQEALEMTNWNR
                     KLAATRLHISYKALLNKIKQYRLIPPRPF"
     gene            16581..18203
                     /locus_tag="VE783_10280"
     CDS             16581..18203
                     /locus_tag="VE783_10280"
                     /inference="COORDINATES: protein motif:HMM:NF040138.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PKD domain-containing protein"
                     /protein_id="HYX53825.1"
                     /translation="MQLTRFSSGIFFAILSLTLHAQTVFHPGTTLTAEQSANTSAADS
                     FPGQKNGNISGRNVSKVPTRTLLNAGSTAKLFAHLVPWFGFGNHVDIGYNSSDILQVQ
                     KQVADMISRGIDGVIIDWYGRATTQHHYAYDQAAQGIMKEAEQHPGFTFAIMADAGAF
                     RGCEQHEDGDCSPTHLLINDLNYAFRTYENSPAYLQVNGHPVVLFFGQEQFAIDWDKV
                     RNQVAGEPYFVFRNASGFTADASKGGYSWVSPFQAGQNDPSALGYLKYFYRAARQNGD
                     SIPFGAAYKGFDDSIALWSQNRRMDQRCGQTWLDSVAEVRDLAAQGQDLFGIQLVTWN
                     DYEEGTEIETGIDNCVSLRAWTRGALLQWKVDGNPDTLDHFTVFISQDGEHLMALTNL
                     PASTTSLDLQSFGLPEGAYTAYVKAVGKPSLTNTMSEGERVELTSRSDGPALSVALSG
                     TSGDAPLHVSFGINAPDHGTAPGSLQVDFGDGSGALNSESGEHIYALPGIYSMTVMVG
                     DGGGRRSVQNFTVQVTAPATASSGANSGKDSD"
     gene            18286..18669
                     /locus_tag="VE783_10285"
     CDS             18286..18669
                     /locus_tag="VE783_10285"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53826.1"
                     /translation="MESRSSLILCVADSNLRLQYLARAVKKAGCNFVLSNSAHNAVAM
                     AAITNELDAAVLDEDMVLGEGSVAESIKAVKSLPILLVCDAGPTGPNPAGVDLITANG
                     SRQQIAAALHKLLQPRVSTSRVISR"
     gene            complement(18976..20706)
                     /locus_tag="VE783_10290"
     CDS             complement(18976..20706)
                     /locus_tag="VE783_10290"
                     /inference="COORDINATES: protein motif:HMM:NF039478.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6519 domain-containing protein"
                     /protein_id="HYX53827.1"
                     /translation="MKADLTRNTFHPLKHFTRVLMQQGRVQLDSDWNEQAAILLRYLQ
                     TLGADLIGPAGGPDDHAFAISALDQVTGDFRIGLGRYYVNGMPCEAEAEVIPISSPNN
                     TNDLVVPQWTLDGKALDQDQVVEIFDNVPQPFATPGITPTLAIIKTATFSGRKLTISP
                     VSPIALTKAVNPCMRRVVTYLTQPNLPEPDALGQTSGNNSGYLAYLDVWERHITWIED
                     SSIQEVALGGPDTATRAQIVWQVKVTKGTMADQKTPCDQFKPDDKNLLSTLFAPYRGR
                     LRARAMQKSTPVDPCLIAPDANYNGEENQLYRVEVHRGGEVATSGILVRNTTDRIGVV
                     RTGKAAPADGPTFKWSRENGSVTFPIVAISPGDNVTTLTLANLGRDDRFGLTEQDWVE
                     IQDDDYVLRNQAGTLLQVQSINRSRLQVTLAGKADAIVGNDPAKHPLLRRWDQEQGDP
                     AEGGLTLGSDNAALIQESDGNLWLELEKGVQVQFQPAPAGQQNEYRTGDYWLIPARTA
                     TADVEWPNETFTDNQGNTTVTPLSKPPDGIQHYYAPLGAFTVGNNNSLKVISDSNNTC
                     RKHFTILTNK"
     gene            complement(20717..22888)
                     /locus_tag="VE783_10295"
     CDS             complement(20717..22888)
                     /locus_tag="VE783_10295"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53828.1"
                     /translation="MSANMADRLYNLLPVVHRMRDADLGYPLRGLLQVISEQVNVVEA
                     DIAQLYENWFIETCQDWVVPYIGDLVGYAPASSTGEPVDVKNRRALARERTVISRSEV
                     ANTVRFRRRKGTAAVLEELAEAVAGWPSRAIEFYRLLSYTQNINYLHLDRGLTLDVRN
                     GFALQELGGGFEETAHTVDVRTPGARHLPSRYNVPSTGLFVWRLRNYSITGAPAFPLN
                     ENPHYFLFNTLGHNMPLYNRPQATTAHPPGDLNLPIPITRRGLKLRKALPPSTHEVSG
                     VPFYYGEDKSFAIRVGDKLVPPESIVVANLRAWTFRPPKPGQVAVDPELGRMVFASPH
                     PRRQSVWVSYNYAFSAEIGGGEYNRPLSQPASHSLYLVGRGESFTRINDALKQWEQDA
                     PENAVIEITDSGVYAETFHLTLKPKQTLQLRAANRKRPVIKLSETFSIAGEAAEGAQA
                     SCWFTLDGIVVTGSSLQLQASIAGVNIRHSTLVPGWGVDCDCEPLYPGKPSLELDDAP
                     DCVRIEHSIIGSIQVERDEVKEDPCRIYLSDSILDSTSVTEVAVGATEELCAYATLEI
                     LRCTVFGQLQAHAIQLAENSILMGRLLVCRRQQGCIRFCYVTPGSRTPRRYECQPDMV
                     IRAATVQAQQDRLSAVDTEALVAGATLRVEPDFNSMRYGSPSYCQLADTCATEITRGA
                     DDQSEMGAFHDLYQPQRADSLRVRLDEYTPAGMNSGIIFAS"
     gene            complement(22885..26502)
                     /locus_tag="VE783_10300"
     CDS             complement(22885..26502)
                     /locus_tag="VE783_10300"
                     /inference="COORDINATES: protein motif:HMM:TIGR02243.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative baseplate assembly protein"
                     /protein_id="HYX53829.1"
                     /translation="MKQPCGCCSGIEVVTPAPETNRPGLPALVYRAGTHQSFLESMIA
                     RLTWLYIDVPATDGSGNTLRIRPLAGLTTREPDDPSIALLDAWATVADVLTFYQERIA
                     NEGFLRTAVERRSVLELARLIGYRLRPAVSASVYLAFTVADGFQGDIPQGTRGQSIPG
                     PGEKPQFFETSDTLPARNVWNNLLPRLTRPQTITLDANVGTDAATRDTIYLQGIATNL
                     NPGDALLFVLGNGNGQQVLRKVQAVDVQTQQNRTEITLEEGPLKASSTDTVQAARDAL
                     LPYAEEAVTIFTGNDLVAEVVLALQTLLNNITQASSGQDASDMTQSFAAEIENWQSIA
                     ARRRFTRVKPWLADLKETVDALVPALLNTQPQTFSEGGVESVKIPLGGVKLLQSGLSA
                     SPLENLTNIIGTLAKPASLQPANQWQLARNFTQTFAPQADVAPRLLSVLRPEAKNIYS
                     AWSGVETPTGQVQVYAMRVKAQLFGNNAPFRVTVKDGNPTFHEWMVYEGATTAVDHEQ
                     QNIVNLDSAYDKVRPGSWVVVDTSGVSSTTKIVASPGLLYAKTGAVTTLSRADYGMAG
                     KTTRIMLVEPDNPASSTNWLDSSQADRTDPSPDFSVIRSTLVYAQAEELELSEEPLDS
                     DVEGNKIELAQLYDGLEAGRWIIVSGERTDIPNTSGVTASELVMVSGVTQGSRPLFCQ
                     QFPGGFQPLAQYAYTTDANQYGDRLVVGFITPDDLAVVRALFGSNRASTLNRQFCDQV
                     QLAPGLYANVYVPNENDAHGEFSDFAGLLVDPDTKVPYPGGIIPQGTAAGEGNRLPVF
                     AWRISSQDVHTILTLANDLAYKYDPATVTIYGNVVKATHGQTTGEILGNGDASQPLQE
                     FALHQSPLTYLSAPTPSGAESTLAVRVNEIQWHEADNLAFLGPKDRKFITQTDNDDQV
                     TTIFGNGEHGARVPTGTANIKAVYRYGCGKVGNVDAEQISQLSSQPLGVKSVINPLRA
                     SGGADHDTLDQARSNAPLAVMALDRLVSVRDYADFARTYAGIGKAAAARLSDGHTLLV
                     HVTIAGKDDIPIDENSDLYRNLFQALEQYGDPYQPLRLAVRRLRLLVINARVKVLPDY
                     QWESVGPNVKDALLDFYSFERRALGQSAFKSETYAVMQAVPGVQYVDLRVFDSVSENT
                     TSAELANLASTLTANDFVGAEMAMPNKGAKDPAHSILPAELVMLTPSVPDTLILTEIP
                     A"
     gene            complement(26499..29627)
                     /locus_tag="VE783_10305"
     CDS             complement(26499..29627)
                     /locus_tag="VE783_10305"
                     /inference="COORDINATES: protein motif:HMM:TIGR02243.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative baseplate assembly protein"
                     /protein_id="HYX53830.1"
                     /translation="MNGADLSCRKEERREAVRAASLYGLDYVEVGSIENDDQRTLYVH
                     FLGKMPPKFEKENLALGGGRRIRDVQITDLRVFRLDDPERDDYMEVDVNKSGDFSTYT
                     LSVVESDAQGRPTGAPMTGFDQRYSKVCFSFKASCPSDLDCKPQSGCPPPERTEPDVN
                     YLAKDYSSFKQLLLDRLSLIMPNWREGHVPDIGVTLVELLAYAGDYLSYYQDAVATEA
                     YLGTARERISVRRHARLVDYRMHDGCNARAWLTLQTTAKQDLDLKQIYFITPFPSAPQ
                     DPMLAEPLLEQVPSSSYEVFQPRTIGAQGETITVHPEHNRISFYTWGDCECCLPVGAT
                     SATLVDNWLALLSNSGHDNPSSQTGAPSPVKPADVPASANKGKAGSGDASVPSSASAG
                     APKVSAAQVAPGLDDGPPNTERALKLKIGDVLIFEEIKGAKNGNCNDADHRHRQAVLL
                     TKVSPSVDPLYHPYKDTFGPQYGQPVLEIEWAIADALTFPLCISSKAPPPKCDCMNDV
                     SVARGNVILVDHGINAGEPLGTVPTQSTEERCPSCCTPAETQALPGLFRPVLSQQPLT
                     FAEPLPPPCSASGYLYQDPRQCLPWISLLSIPPAPECAQPTVTVTESTEALLLAECKD
                     NPEPTVPCELGPLFDFADIDDPSALARRLKNPGQDTAAGFLRAQLAPALIAELEAWDG
                     SSAMKDPLRSDLLQVLNGLLETWTPLPDLLESGPDDRVFVAEIDNEGYAHLRFGNGLL
                     GRQPEAGTAFRAAYRIGNSKAGNVGAETIRYIVFRNSKLSGITITPRNPFAAQGGEDA
                     EPIDDVKQFAPYAFKAELERAVTADDYSTIAGDNARRWKERALLEASDSAICMQPFRP
                     MQAVKSSLCWNGSWYTAQVALDPEDTETTDESLISEITDYISPFRRIGHDLLVRPAHY
                     VPITLALTICVLPEYLRGHVESAVLDALSNRKLPDGRLGFFHPDNLSFGDGIYVSRLL
                     AAVQSVPGVMDVTINELERFEISEPLDDVEGEEVPDNAVLELGPLEIARLDNDPNFPE
                     NGRLVLNVRGGR"
     gene            complement(29719..30084)
                     /locus_tag="VE783_10310"
     CDS             complement(29719..30084)
                     /locus_tag="VE783_10310"
                     /inference="COORDINATES: protein motif:HMM:NF016829.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GPW/gp25 family protein"
                     /protein_id="HYX53831.1"
                     /translation="MNIDFPFHFDSRGRTATTGVDDHIRDMIEQLLFTSPGERVNRPD
                     FGSGLLQMVFAPNSPELAAALQFTAQAALQRYLGDLIDLQSLEVTSQDASLNVTVKYV
                     VRLTGDSHTENFIRSAPAA"
     gene            complement(30114..30443)
                     /locus_tag="VE783_10315"
     CDS             complement(30114..30443)
                     /locus_tag="VE783_10315"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53832.1"
                     /translation="MPGMLVHVGATVLCSHGGQAQPTVPNPRVMVSGQPTVTVAGPYL
                     VAGCAFPPPPGGNGPCVNATWIPPTGTTRVLSNGQPLVVQSSQAICTPTGTPLVITLT
                     QLRATAM"
     gene            complement(30444..31001)
                     /locus_tag="VE783_10320"
     CDS             complement(30444..31001)
                     /locus_tag="VE783_10320"
                     /inference="COORDINATES: protein motif:HMM:NF016595.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage baseplate assembly protein V"
                     /protein_id="HYX53833.1"
                     /translation="MREGTKYYGIYRATVVNNVDLENLGRIIVSVPDVSGLTPSTYAN
                     PCVPLAGRQMGTYMVPPIGSMVWVQFEAGDPDRPVWTGAFWQETYELPLAALTPPIPP
                     GQNIVFQTSLQHLMSISDATPIPMMAPIPAPAPPGTGGIVLRSPTGAMIVVNDTGIYI
                     NNGKGATVELVGPSVMINKVALVVT"
     gene            complement(30998..32125)
                     /locus_tag="VE783_10325"
     CDS             complement(30998..32125)
                     /locus_tag="VE783_10325"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53834.1"
                     /translation="MNRGFYLTLMIGSFNADPAPQPVIDALTEVQVSSTVGSQGGFQL
                     KFTLGKNSPVQQMHNSGYFDPRRRVIIAVTVNGSVEVLMDGIITKQDLAPSSAPGKST
                     LTVTGLDLTALMDFIDLTGIPYPALPNFVVVEMILAKYLVLGVVPLALPASIPKFENP
                     LDHFNKQQGTDYGYVTSLAQEDGAVFYLDPGPQPGRSLAYYGPDLSKLFGGVQPALSI
                     NFDATSNIDSLSFSYDGTLATQYFVTIIEPNTKIPIPIPVPNIDLLKAPMAAHAPTPL
                     KSQQLTPTANETPAGAALAGLAALFKTADVVSGSGQLDVLRYGRVFKARQLAAVRGAG
                     DYYDGKYYVKSVTHNIKRGEYKQSFTLSRGGTGSSVSTVSV"
     gene            complement(32122..32508)
                     /locus_tag="VE783_10330"
     CDS             complement(32122..32508)
                     /locus_tag="VE783_10330"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53835.1"
                     /translation="MSNGSNSNLANDPVQAMLAQTALQRTLFAPTSRYYGLDTASLTG
                     SDGRPIIYIVRRFVPAADGFQLLQYHTVTQDERLDNVTARYLGDPELFWRVADANSAM
                     RPEELMEKIGRRLRITLPQGISGSKL"
     gene            complement(32505..33167)
                     /locus_tag="VE783_10335"
     CDS             complement(32505..33167)
                     /locus_tag="VE783_10335"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53836.1"
                     /translation="MSTFPGSPRILKGGLVLLDPDTFNVLPNGIIVLQYNPDTLSRTL
                     KIQGVEEGGDRSEALRLKGPPVETFKLDAELDATDQLEFPDKNPSVAQNGLFPQISAL
                     ETIVYPTSTSLQNNFNLSQQGTLEIVPMEAPLTLFVWSARRIVPVRLTDFSITEEAFD
                     PALNPIRAKVSLGMRVLSIDDLNFSDKGGSLYMVYQQQKESLARLYQGGAFSALGIRG
                     IP"
     gene            complement(33238..34296)
                     /locus_tag="VE783_10340"
     CDS             complement(33238..34296)
                     /locus_tag="VE783_10340"
                     /inference="COORDINATES: protein motif:HMM:NF025078.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4157 domain-containing protein"
                     /protein_id="HYX53837.1"
                     /translation="MVHDVVRSPGHPLDHATRAFMEPRFRRNFSQVRIHTDNKAAESA
                     RMVGATAYTSDNHVVFGTAKYAPGTSHGLHLLAHELTHVVQQSGTAGALQASGFVSEN
                     DPSEYEADSTARAVMADRPVVIGNRAADGRLHRHKDDIVAYSGGQSGVINVIQAGTLI
                     KTVNAVSGHPGRGENEPGSGPIPTGNYMMHPGITQPTVAKHQTGVCGAAGIGTGFQQI
                     TSTDATPCSLAHYCNVPCPTKANPARVCYTPVDCWGPMRIKIEGSKVVVTPSGKKAVR
                     DGFFLHGGNPKDAVSSGCVKSLDNSVFAEIRKLTGMKGAVPFCVGSACPPTVGGAVLG
                     SAVEAVSDFLHGLIPSGR"
     gene            complement(34577..35650)
                     /locus_tag="VE783_10345"
     CDS             complement(34577..35650)
                     /locus_tag="VE783_10345"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53838.1"
                     /translation="MVEHHRQYFSASIRREVNESAGRNLPANIMKPASASGIRQSYYD
                     ARRGGAQPQEVSFEAMRSRTVILPGPAQEPRPGETVRLPDIVLATGIGFQDSINSTLS
                     YHGTISRGGPPPPDPFGITRAYDLTLSGINVTHAGSRFNVTATVENPITFQLISGGAI
                     DISSETDSDITQENYQSVVNDLTPDSDGRPLRERYWAEDLCIAHERFHANESLAFNRR
                     FVGESQSWLNTQSAGNIAAVRSYLAEVPARVTSSTDTAMGCPGACEDRAYSAGGPAYL
                     ARANAIKARGDAGDYAGLSRGAKVGIGLAVGTAAGAGIGAGIGAAIGSNIPGLGAGAG
                     AGYGAAIGAGVGLVGGLIVGLLA"
     gene            complement(35928..37544)
                     /locus_tag="VE783_10350"
     CDS             complement(35928..37544)
                     /locus_tag="VE783_10350"
                     /inference="COORDINATES: protein motif:HMM:NF025078.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4157 domain-containing protein"
                     /protein_id="HYX53839.1"
                     /translation="MTRQVQNPKALVHPAIAVNSGLLFRKCACGGQSASGDECEDCKK
                     NKLQTKAAGPRLSKAIPPIVHQVLGSPGAPLDRSSRTFFESRFGQDFSGVRVHTDASA
                     AASARAVNAVAYTAGNNIVFDQGQFAPHGHSGRKLLAHELAHVVQQGGSAARAPEMIA
                     GPHDASESEADKTAEKIMHPGRPEVLSPAGNGSLMRKLRVDRPADRIPNPSGNGVNQT
                     NAQVAQDALRTMADGSEATVNTSTGEVTLATAYCPGFVGGLVQGARSGYRIGNMIGSF
                     GGHVPLLGPIVGAVGGLIGGLVGGLAGLFGNESISAAGASSTPTGAKCLCTIVNSSNP
                     WTIEINDTDHPRTMHENDPRDPLHIRSLPGGRVRVTSPNSPQTWGVATMGGTLENAPT
                     WLLLSHELCGHAWLQEKKLPEETSGGAGAVRDPNTGQLSVGNSDQLNPNTTAPHGDEF
                     AIQRENLIRQEHGLPSRGYRIRDPYCGESFWRDRATPQGQPHFTEGGDPNFTFMQQCQ
                     FLRSQLPENRNGQYRIDQQIPERQPSGAAR"
     gene            complement(37587..>38572)
                     /locus_tag="VE783_10355"
     CDS             complement(37587..>38572)
                     /locus_tag="VE783_10355"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53840.1"
                     /translation="AGASPAPAATTPATTSSGLREWAFGIELGRMSTYFSGHGDAHLD
                     RSPLNATPQRGSEHPACELELQLKLKFEFHLGPSPYRMGPMGRMTTPGGPWPQDRANA
                     WKRAFMNSVQSMWHTRWPMEPANPCPGEPCTRANGHLQVIDVDTMTNAQGQERRQLGD
                     PTPNMPHVTLDVYEYRPMAGQHDSRASESRATLYSEDVLPQGTPAPQGFDNDRYSWLA
                     GNAPHEVGHMLGRPHVSCPPGTPGDSNRDECYGAIGSSERQNIMGRGQEFSREDQAPF
                     LAAMRAITGCEWKTSGGGLPGWAIALIAIGGALLVGGAIGLGAYFGSAPHR"
BASE COUNT         7453 a        11294 c        11536 g         8289 t
ORIGIN      
        1 gtgcgattca agatgccaca ccccgcgatg caacccgccc acgaaaaaaa gacctcgcca
       61 gaatcgcatt ttggaacaaa gcaggaaatc gtcccggatg cattggccat ctcacgaaga
      121 cccgtctgtt tcaaccggag aattagcttc gcgctgaaat ccgcaaactg actccactga
      181 gccatgccac ccccgtccgt ctcgctgtgt tacacttgaa cggtcgtctt ctgggaagcg
      241 ttcttcccgt tccccgcaca aacgggcgcg tagctcaact ggcagagcaa ctgactctta
      301 atcagtaggt tgaaggttcg attccttccg cgctcaccat ttcttttcac atttcccaat
      361 cagttgccgg atctctagtc gaggctcgcc gttgcgctgt gccgtaaact ttcacaaagt
      421 ctgggatccc tccgcctcgc tcatcttgtt cagcaccgtc cggagttaag cgagatcgtt
      481 cggctcgctt ccacccagct tcaggttgtc cttcactgcg tgacggaact ggcggatgcc
      541 gtcgcccagc cctttgccaa actgaggcag cttttttccg ccgaagaaca cgaccatcag
      601 cagcaacaga aacagcagat gcgatggaat gagcaaatct ctcaaaaaca tttcttctct
      661 ccttaatttc agaactgcaa cttcaagagg agggaagacc ggcgctgatc aaagcgccgg
      721 cctccgttgg ttagtcaggc gtcccggcaa tttacggaac cagaggcgcc acccaggcgc
      781 gtccgcgtcc gccgcgattg ccggctgtgg ggtcttccgt gatgtagagt gaaccgttcg
      841 tagtgtccac ataaagacca aaggcgaacg agaagcctgc cgtgccgccc ggggtcaggt
      901 tgggatcgaa gggacgcgtg caggtcagcg agcaccagac cgtcgcattc ggactgcccg
      961 tcgccggaac cactccaccc tgcagataga gggcagtggt gttggtggcc acgttgtatc
     1021 gccagatatt ggcattggct ccgccgggtg aatcagccgc gtacacaaaa ccattcacgg
     1081 ggtcggttgc cacgccggcg atgaagacgc cggaaggcat gggcagaggg ttggtggcgc
     1141 aaggcgtagc tgcattgggc gggcaggtgg tgatgtcaaa ccatgaagcc gcgcgattct
     1201 cggaaatgta aacccgattt ccgatcacgc ctatggttcc gttcgcgccg cggccatcgc
     1261 ctgtcaccgc aacaattcct accgtctgcg aacgaggatc gccgtttggg ttggtgacct
     1321 gtcggatgtt ggcctccgtc aaatcagtca cgtacaggtt tccgtccgcg cccagcgcca
     1381 taccgttcgg cttcagcgtg cgcacgtccg ccagcggaat catgccctcc ggagatcctt
     1441 gcagcgtctc agtcgtcggg ttgtaagtga gccgccagat cgcgacgctc ttcaccgcgt
     1501 tgtcaggcac ataaatgtag tgcgtgactc catcggcgtt cacacgcgga tcataaaccg
     1561 cctgacccgg tgagccgatg ctgccatcgt cacacaccga gtagttgatc gcattgatgg
     1621 tggtgccggg taccggatct tcacggcaga atccattcac gtggtctgac gtccagaagt
     1681 ggccgccaag ggagccgggc aggaagagca ttcctccctt gggtgcggta attccccacg
     1741 cgtacagcgt agctgtcggg ttcacgtagg agaagcgatc gccgctcaca attccgctgg
     1801 ttccaccagg cgtagtcacc tgaacatcaa ctgttccggt tcccgccggg ctgaacaccg
     1861 tgcaacttga gccatctgcc gcgcagttga ttccagtgcc ggcgttgggt ccaaaggtga
     1921 tagaagtagc gccagccaga ttcgcgccac taatcttcac cgatgttgca ccaccaagca
     1981 agccgctggc gggtgagatg ctcgtcaccg ctggcccacc gccaacaggt gggggtgcgt
     2041 tgtaggtgaa gaggtcggct gccgaagtag cgctctgctc gccgtttaca accgcgcgca
     2101 cgtccaccgt tccggatccg gcaggagccg tcacagtgca ggacgttact gacgcgcagc
     2161 tcggactgac gccctgattc gcgccgatgt agatctgggt tgcgcccgga gccgtgtcaa
     2221 agcccgttcc ggttaccgtg atcactgttc ctcccgcagt tggtccatta tttggcgcga
     2281 tgctcgtgat cgttggcggt gtaggagccg ccgccactcg ccatatatgg ccctgaagcg
     2341 tgggcgccac cgccactacc agcgaagcgg aaaaatcatc tcccaccatc agatcgccac
     2401 ttggcgtaaa gccgaggctg aacgggttgt aatactggtt gcgggtctga ttgtcatagc
     2461 tcgatgtata ggccggcacg tacgccgaat aagtggaaag cgcgccgctc attgggttcc
     2521 agcgcagaat gctgcccgca gtcgttatgg gagagtcgcc gacaaaaagg ttggttccat
     2581 cggtggcaag ccctcctggg aagaaactga tctgcggatt gaatgtgctg gctttgcatg
     2641 gcgaagccga gttgcacgcc atacgcgtaa ttccctgagg atcgggaatc atggaaagcc
     2701 cattgccgcc actttccgca acgtacagat tgttgttcag gaagagcaat gagttcacgc
     2761 ctcttccatc gctcgtggta ccgatcttgg tcaccggcgg cgttccgctg gtgatggaag
     2821 tggcattggc caccttcatg atgtccccgg atttcaggta gccgacgtaa agatctgtac
     2881 cgttcgggcc cattgccaca gctacaggcc ggccacctcc ggcgcccccg ccaactgagg
     2941 ttgggttctg cacctggaat gtcaggttgg cgctgagctt ttcagtcgaa ggatcaaaaa
     3001 caaaccgcac gattgaaatg cttttggtcg atgcatccgc cacgaacacg aaaaccgcgc
     3061 cggacggcag tcctttcatg ccggcagcag gcgtggccgt aactacctgg cctgcactct
     3121 tggctgtggc ctggcagttc gtcatttgcc acggtggatt tccgcccggc agcggatcaa
     3181 tgcggcatat tcccagcacg ccatcgctct gccagtaatg gccgcccgga ggcgttcctg
     3241 gcgtggtgtt agccagccac actcctccgc gcggcgtggt gttgttctgc agcaccatga
     3301 tgccgtccgt ctgggcgccg cctttcgcca caagacctat cagcagtgcg gcaacaaaga
     3361 atgtggatcg cgtgaggcgg gagccatttc cgctcacgcg gttttcgggt attttctgct
     3421 cgattgaagt ttcactcatc cggtatttca ttacagcttc cttcttccca gtccgctcat
     3481 cgcccgggac atacttgtat tccggccaga gccggcgtgc gttcgctttc tggagcagcc
     3541 tcatccgtca aaatgcaaac tctccattgc gaatctgttg cgctgcttct tcaaaccgtc
     3601 tcactgtaaa aacaggtgct gccgtgccgc gcagcgacga cagcacccct caagctactg
     3661 ccggacacgc gtaactccgg aagaggcggt gcctccggcc gtagaagtca ctgtcactcg
     3721 cgtgggctgg ttgacccccg taaagacaat gctgtaattc ccaactgctg ccggcacggc
     3781 cggtcccatc acgcccgtcc acggtttgcc cgttgcaggg ttagtgatgt ccagggtgca
     3841 agtcagcttg atcccgggtg ttatgtccgt gacattcacg gtcattgaac ctttcagcgt
     3901 gcgataaacc gctgatgtga tcgtgattac gtccaggatc gggttgaccg tcacatttac
     3961 ggtcgcagtc gaactcaggc cggatgctga gctcttcgcc gttactgtga atgagaaagt
     4021 gctgggtgcg gatccggccg gcaccgtcgg cgccaggaac ttctgctgcg agccgtctcc
     4081 gctggaagcc gataacgtta cgccctgtgg ggcgagccac gtgtagctga gcgtcccgcc
     4141 ggcgggatcg actccactgg cgttcaacgt cacggatgtt ccgcttgcta ccgggctcgc
     4201 cggagccgcg ctcgcgctca ccgctggtgg cgcgggcgca gccggcggca ctattggaac
     4261 gctcacggtc gcggtggctg gcgtagtcga gtttcctcca cccacgctta cctggaacgt
     4321 gagattggtt ggcgttgcga cagtaggagc agtaaaggtg gctgtcattg cgttcgtagt
     4381 gctcagcgcg atagtcggat ctccgctgtt tgcgagctgg ctccacgcga atggaccgtt
     4441 gctcggcgta ctgccattgg cgctcagcgt caccgtggtt ccggcgacga tgggagtcgc
     4501 cgacgcggta tagcttgcaa ccgcagtagc agtcggtggc ggaggtgtcc cgcccggcac
     4561 tgctgtgcag gtcatctgcg gcgccgaacc gcccggccac ggattgagct gcccgatcgg
     4621 ctgattccca aagccccacg gccctgaacc attcaccagg aagggaagat cattgaagtt
     4681 gagcggcacc ggcggatcgc caaccgccag gttctccggg aagatgaacg tgaaattcgg
     4741 cgcctgataa cgtcccgcca tgatccccag cttctggttg aagactgccg gcggtggata
     4801 gtcgatctgc acgccaacaa ctcgtgaagg tggcaggaag cttccaccag tgggacgaaa
     4861 acggaaccgc ccttttttcc ccagtgtcgg cggtccgggc tccacggtga actcaaaagc
     4921 ccacggcgcg cggtcagtca ccactccgtt acagtcctgg tccaccgcaa aaatgtccac
     4981 cgggcgtgaa ggatcggtag agaagccttc cactctcgct ttggcagtgg cttcctgcgg
     5041 gaatgcggga ttcggaattc ccggcgcgcc ttgcagcagc acgtcgatgg cgacgtaagc
     5101 cggcacgtct cccggcgtgg tatagatccc gacgttcgca attaccgtat gcgcggatag
     5161 aattcgcgtg ccgttgtagt ccagcagcgt acccgcgtaa gtcacgtaat ctccaacttc
     5221 aaagggcgcg aatactgtcg ggtctgtcgg attcggactg gcaggcgagg ggaacgcgcc
     5281 ccgcggatcc atggtgtagt tcatcacaaa gtttccgctg ctatcgcggg gccggttctt
     5341 ctgcgggcag agcggatcat cgcccatcgc ggggtcctgc cgcggaatgc acattggaaa
     5401 agcagtctcg gcacgaaccg ttggattgtc ctcgtcgatc gagaagcgca catccggtga
     5461 cttgccaata ctgaacttgc ctgccggatc attgatctgg atcttggttc cgttcaccac
     5521 catgatgccg ttcgcataat ccagcgactc gatgaatccc tggctgctgt tcagcgactg
     5581 ctgcgaaaga aagatcaacc ctgcgatgta agtgccattt accacgtttc cctgcacatg
     5641 cgcttcaaac gtcccaggca gccgcgagcc atccgtgaga gccatgccgg tttcatcgcc
     5701 ggagcccgcg gggttgtact cgaaaacttc ttcccaggtg agcgtgttgg ccggcatctg
     5761 caggatggtg ttctgcggaa cgcggatgac gtgcccgttg atctggatcc agccgccgga
     5821 tgccttgcag cccgccggct gcggtggatt ctgcggcgtg ggattggagt tccgctggca
     5881 ctgcgtgtcc actgatgcga actgcattat gccgatcatg tcgaacggcg ccactccgcc
     5941 ttgcgaagcc ggcacctgcg ccggcgaagg cggcgtgctt ggcctttgtg cgtatccgct
     6001 gagcgccagt agcagcgcgc aggtgattgc gagttttccg gaagtgtttc gtctcatcgt
     6061 gctggctcct gcatggcgca tcgtcatctt tgcgattggc atctcagtgg gtccgtcatt
     6121 cccgctcagt gcgtgttcaa gttttgcagg aatgtgcgga gcggcgtccc accgttcctg
     6181 cctacagccg gaatctgaag catgcgatcc gtcgcctgac cgggatgctt cgggtcgttc
     6241 tgtacggggt atccgttcgc gtcagccgga tgcccattgg gaacaaacaa ttccgggtga
     6301 tcaaaaggcg ctgattgatt taccgtgcgc gggtccgtga gggcattgcg caggaagtca
     6361 gcaagatcgg tcttctcctg catggtgagt ccgagcggaa caatgttggg atcgatcagc
     6421 ggaatctggt cgaagccgtc agggaagtct ccgcctcggt tgtagaactc gatgacctgc
     6481 tcaatggtga gctggccgcc gttgtggaag taaggcgcgg tgagtgcgat gttccgcagc
     6541 atcggcgtct tgaagaatcc ggtgcgcgcg atgtcatccc agcaactcag tggcgcagcg
     6601 ggcaggctgt caccgggtcg ccccggtatc atcatggaaa agccgggatc attgcacaca
     6661 cgctcgcgca gcaactccga ctgcgaaagc ggctggcctg ccgcgccatc cacatcgccg
     6721 agactgatgt cttcttttcc cggccgcacg ccgatgttgt agaagccgtt gtcatacacg
     6781 cgcacgttaa agtcgcccat gaccatgcgt tccagaggct ggatggaaac gttgcccaca
     6841 gaagcattgg aaagctccgg gccaccgtgg cagttgatgc aacggccttt cgtctgaaat
     6901 gtgagcaagc cgcgaagctg cgcctgcgtg agaggcgtag ggccaactga atagctgatg
     6961 ttgatgggaa atgccgcggg tgggggaacg tcgaactgta tggaaagagt gccgctcgca
     7021 tagtcgatgg aagcctgcgt cacaccctcg ccacttacgt ttccggctcc atcatcgaat
     7081 gcaaacactt cctggtcgct ggaatcgagt tgcggattca gctcgaccac ggaaacggtg
     7141 tagggatcca caccgggcgc gagttgcacc gagtaccaat tcttgacgtt gtccccggtg
     7201 atggaaaccg tcttctgtgt cttcagataa ttgtcgagtg gcgtctggtc cgcaaccagc
     7261 gtgctctcgt acatctggat ggcaatgccc cagaagagcg agaagttata ttccatctgg
     7321 aaatagcccg tggttcctgt gggacagggc tttcccatct tgatcacaat ttctgctccg
     7381 ccattcgccg gcacacagat ctgtccgctg gactgccacc acttgggttg gaacgccgcc
     7441 ttgatcaggt caacgtagct gggttgcaag ccgcggccgt tcttcacgga tgtgctgccc
     7501 agtacgctgt cagtgggatc gaccttctga gcgccgagcg ggcttttttt ccccgtcgaa
     7561 agcgggcgca ggaaaagaag cttcgttccg atatcgcgaa acgtccggtt tgaagccgac
     7621 atttcaaagt tgcttcccgg cggccccagc gcctgcgagc acagtgacga gttctgcagc
     7681 cgcaccagac cggacgtcag gggcgcggaa ggtgaactcg ctgaatagaa gtgcgaactg
     7741 gtgtcacgtt cgccgaaggg atttgcgcca ttgcaggtgt tctgcgccct tccgtcccag
     7801 aagctgcgat tgttgaagat ggcgttcact gcggaaggcg tattacgcgg ttcgacccgg
     7861 cgcgtgttga tggtgttggc tgagttggcc ggatcagggt aggaaaaaac ggcatccgag
     7921 gagatcgtct gcttctcaaa ggagctgccg agccgaacgc gatcgaacga agtggagaac
     7981 acgccctgcg aaccgactgt gtcattcaca tcggaaagcg gattgttgcg cgtgtttacg
     8041 tcaccttgtt tatgcagcgg gaagtcgcca tcgtggtacc cgccgaatcc cgcgccgggt
     8101 gtaccggcat tgaacgtata gttgggatag attttgccgt tgagtggcac tcccatctgg
     8161 aacgtggagt cgcccgcttt caggccggga ctcagggcgt tgttcacgcg gctgtctgcg
     8221 ccggcgttga agtggcagct tgcgcacgcc tgcacgccgt cactgccggc ctgcatgtcc
     8281 cagaaaagcg tcttgcccag aacgattgcg gcctgtttgt tggcgacgta gtcgccgatt
     8341 ccaggcacat ccgggatggg aaccgaacta agagcagcca ggggacgaag cgtgataacg
     8401 ttgccggtgg gtgcggttcc gctctgtgcc ttcacacgcg ccaggtaccc cagcgctgcg
     8461 actatcgcca gcgcgatcgt gcatgttctc agcagattca ggggccagtg tttcgacgcg
     8521 ttcatccgtc ttctcctctg tgcgcttcag gaatcgttgt ttttgctttg tgcgatcagc
     8581 aatcggggca gattcttgat cgcgtccgga agttcctgtt gcggcacgct tgcgttacat
     8641 cacgtgattg cacgttcgct gccaagtgga ttggcaatcc gcaaccacga gccctcaggt
     8701 gtttgcttga attgcgcgcg agcgatctaa ggggtgaaaa gtttgtgacc cccaatggca
     8761 gcctgctgct gctcgggcaa tgcgccccga tgtttcgaac gcgcaaagaa gaaagccagg
     8821 cacgtggcct ggcttcggca gggaactgaa accatctttg agttacttgt tcgcgctgat
     8881 cgagcgtgaa agtccgccgg tagcgccctg tccagatgtg tttctggtgg aggcaacggc
     8941 gccgcgcgat tgcttgtcat ctgttgcctt tgcactctgg cgagcgatgt agttcaggat
     9001 ctgctccgca tccacagtgt gaacgcggag gttcggcatg cgtacctctt tatagcgacg
     9061 gaacaatgca atcgcggtag ggtccttctc atccagaact ttgtcaggct cctggatgaa
     9121 gcgcaggagc catttgcgct cgcgtgcgct ggttacgccc atgaggtcag ggccgatctt
     9181 atcgccgtgc cccaccgtgt ggcaggcagc gcaatgcgta gagaagatgt actggccggc
     9241 ctcgagcttt atgggccgcg cgttctcgta ggtctgctgt ttggtgttgc cggaagcgga
     9301 atacttccag ttattgagcc agtcgccaat cagcattgcc agaaagcggg gattatccgt
     9361 ggctgagttg cgcatccact gtccggtgcg ctcgtttccc accaccacgc tcggcgtgtg
     9421 tccatcgcga tcgttagggt ccggttctga gtagaggccc agcttcttgc tcacgagctc
     9481 gatgtcatcc tttttaccgg tcaaaaacag ccagcccgga cccgcgtggt atttatcggc
     9541 gtaagccttc agggcctcgg gcgtgtctcg cttgggatca atggtgatgg agtaaaaaaa
     9601 gatgtctttg cccatcgaat cgcccagcag cttctgcacc tgagcaaggc gggccgtctc
     9661 aagcgggcaa gcgtccacgc agtgggtgta gatcaggtct acaaccacga ttttattgcg
     9721 gataaggtcg tcgtaaagtt ttaccttctt accgtcttgt gtggtgagtt ccacattggg
     9781 aaagtagttg gagccccaat gctgattgtc aaatgccgcg gccaccggag cccggcacag
     9841 ccatagggca gcaattgcca ggctgcaggc cactgaaagc gctcctgcaa tgctcttccg
     9901 tcgcttcatt tcaaaactcc cggggagaaa aatcgggcca ccctgcttta cccggatggc
     9961 ccatcggttc gaagttagta agcggtgggt gcgatctcgt ccgggttctc gaaggtcacg
    10021 ccggtcggat gcggaattgg ggttggcagg ggccgcagaa acggctggcc accatcatcc
    10081 agttcccagc gcacaagcat ggcgttatcc tcatggacgg tgttgtggca gtgctccatg
    10141 aacatgccgc cccagtcacg gaattgcatg gtaagggtta cgcttccatt gggtcgcaga
    10201 cggtaaacat ccttgcgtcc tttctcccag tcaggaactc ccacatccgt gccaagcaca
    10261 gtccgttgca ggatctgccc ttcctcgaag tggatgtgga tcgggtggtc ccatccgccg
    10321 ccgccgttta ccagatgcca gatctcgcgt gtcccgaact tcggcgccgc ggagagccgt
    10381 ccgaagtcgg cgttcagcat cttgccgcca tccacctgca caccccacgg tccaggcttg
    10441 ccgccggaac cggtaatgaa cgaggtgatc gggtcactct ggttctgcga tgcgccgctg
    10501 ccgaacacga atgtgcgctc gcgagcaacc ggaacattcg aaagatcggg attcgggatc
    10561 agcgttgacg gcacctggct ttgatcggat accgctggtt tgcggacgat ccggaactcc
    10621 aggaacttgc caacgcaggg atcggaggac ttgccgccca gtgcgtcaga aagtgtgcgg
    10681 tccttggctg gcttggcgcc gtcctggtgc tcgcagaggt tcaccatcca gaccttgctg
    10741 cccacgctgt agcgcgagaa gtcaataacg atgtcatacc gttctgcgat gccttgctcg
    10801 tcgagttgcg tcagcttcac cggatgcggg agcaggttgc catcgttgca tatctggatc
    10861 atttccgaac cgtcactcag gcagactttg aaaaaccgtg aaacgctcgc attaaggatg
    10921 cggaagcggt acttccgcgc ctccacctcg aaatacggct tgtacgtgag gttcacggtc
    10981 atcgcatcgc ccagaaaacc ggtgaagttg aagatgtcca tgaagagctg gccatttgag
    11041 ttccaggctt tgtcggcgag catcaggttc acgtcgtaat ccaggttgcc ccaggatttt
    11101 gcgctgcctg aagggaggcg caggttgata ccgtcactga tcgtctcgtt gccgcgatcg
    11161 atgccgctgt aaatgttgaa catggcggca ttgcccttat agacgttctg tgaagtgaag
    11221 ctgaacatgt ggtcgtgaaa ccagtgcgtg ctcatggttt cgtgccagtc tcccggaacc
    11281 ttgttggtcc cgccgctgtc gtcaggtgag cacgccaggg gatcagttgc atcggtgttt
    11341 accgtgaagt ggcctgccag cacaatgggc cagtggtaat cgtagaactg tcccgggaag
    11401 aagtacgccc ccgtaaagcc atcgttctcc gcgccgtggt ggccgttgtg ctcgtgcgtt
    11461 gagatcgtgt tgcgcccgaa tccattgttc tgcgtcacat cgaatggcag tccgttgtga
    11521 tggcggaaca gaattggctc accgtagcgg ccgatgacga gcttaggggg aatggtgccg
    11581 ttgaacgtcc acacagagtt tgaatcttgc gtgggaagtc cgggatggaa cttcagcggc
    11641 aacggtagtg tgggatcgat gccgctattc atgttcgatg cgacccccgg gttgtagctg
    11701 ctattcgcgg tcgcgccacc ctgcgtcatc tccaccgcga cctgcggcgg gaacttgtcg
    11761 aagccctggt gcgcccagat cgctcccggc ggccggcctt caataggacc cgtcagtccg
    11821 gactgtccat tcaccagcgc aggattcaat ggttgctgtg tttggtttgc ctgcgccgtg
    11881 ggatacggat tcagcgaaga aacggggttc ctcgagacga cgtcaaagcg cggcatcgcg
    11941 gtggtgaatg cctgcactcc aaacaacggg ctggcgggca tccctgtggg gatgctggag
    12001 gaggtgctcg atccgctgga accaccagat ccgcttccgc catcaccgaa tgcgacaaac
    12061 gggctcaggc ctccaatgga agctatggct ccgccgctgg tgatcagtcc ccacttcaac
    12121 aggtcgcggc gtgagacctg tccctgcgaa taggctttca gtatttctgc ccggttttga
    12181 cgcgcctgct cggcatcacg ctggcgcctc tttgaggcat tgggtggcaa atagaagata
    12241 ctcatcggct gcgctcctcg ccgtgcagcg atccgcttta gcggcacgtg atcgctgacg
    12301 gaggtctggt gctgagctac gagatccgcc gtctcgttcc cagctttatt gttgattggg
    12361 gcggtccgtc gtaagccgga agctgccttc cagctgaatc atcttgcgaa gtgcaaatat
    12421 gcacgttcgc tgccatgcga ggtgctgatc cagtaagtca tgcaccgaga gatgttgcgg
    12481 ctttgcggtc cactcgcggc acgccagggg ggtgaaatga agtgttacct atgtggtagt
    12541 ccggtgcagt agagctgaca aggaggaaat gatgcgtagc gcgcgatagc agagagcaat
    12601 tgtcaccttt tatgccgcgg cgccgcgctg atcctgttca gcgctcttgc aatcgccggt
    12661 gacgttgcat tgctggtaat tgcggcagca gatgccggct tcgtccagct tgtagataag
    12721 tgcccggtag ctgatctgga gcattcgtgc ggtcttcttc cgcttccagc cgttgctttc
    12781 gagcgctttc aacatcacct ggcgctctac ctgacgtacc gcctggcggg atatttcctt
    12841 caatgacact ttgccgttcg gcgggatagc gaactgaaac acttctcgct cgcgctgggt
    12901 cagatcggcc atgatcgatg tcggagagcc aaggacgaca tagcgcctga ccacattctc
    12961 aagttcgcgg atattgccgg gccagtgata ttcctgaagg cgattgatca cctcagacga
    13021 tggcatctca gcttctgtgc gataggctgc gttgtaatgg gctacaaagt agcgcaccag
    13081 cgccggcaaa tcttccacac gttcacgtaa tggcggcaga tggagagtaa gcccctcaat
    13141 gcgataataa aggtcttcgc ggaagttacc ttcgagcatt tcctcttcga gatcgcgatt
    13201 cgtggcaaaa acgaagcgag cctttgtgct ccgcggttca tggctgccaa gccggcagaa
    13261 ggtcccgtct tgcaaaaggt gcagcagctt ggcctgtatc tccaggtcga gctcaccaat
    13321 ttcatcaaga aagaccgtac ctttgctggt catctcgacg cggcccttgc gcgagctgac
    13381 tgcgcctgta aacgctcctc tttcgtatcc gaagagttcg ctctccacca gattggcagg
    13441 aagggcggcg cagttgatct gttcaaaatc gctgttgtga gcgtgagagc agctgtgaag
    13501 cagtcgggcc agcagccctt tccccgtgcc gctctctccc gtaatcagga caggaatgtc
    13561 agtctgccgc agcttctgca agcgctcatg cagttgcgcc attgcaggcg tgcagccaat
    13621 aagaagattc aactccggca gcgcagcccc caaccgcgcc gcagtactct gcgaaaccaa
    13681 gcctgacata cgtctccaaa tagcagcttt cttaccactc ttgagagttc ccggcgtgcg
    13741 ccggcctctc tgaagcgact gcggagtgaa ttcgctgatt tgcatcagac tgccactgtg
    13801 gcagatttgt gccactctct tgcccagcac ttagttctac tacgacgctt ttgttctgca
    13861 gttgacagaa acgatagccg ctaccgcaac actaacacct atgagagcga gctgggcgca
    13921 atgagtgatt aagcgtgggt gcttactccg ctagcttcgt aaaaaaaatg taaaaactta
    13981 tgtttacttc gtcgttaact ggtgtatttt tattttaacc tttgtacgtt ttgtgaccag
    14041 gatgagcaac acctcaccgc tacttctctc tttccggggc cccgtgtgtc agactcaatc
    14101 gatgatgctg ccgttctgca gttagttcag ttgcgcaagc acggaggtag gccagtgatg
    14161 gcctccagat catctgttgc cgcgcgggcg gcctgccctg atcctgctct gcacgagcgt
    14221 ccccgccagt tgagcgaacg tgtggagcgc gaggtgttcc agcgaaccct ggtgcttgcg
    14281 gctgtggcgc acgaattgaa aacgcccctt gccttgctcg aaggctatac agattttctt
    14341 ctgggcaatc acgccgggcc actcacagag aagcagcagg cggtggtgag tgagatgcag
    14401 cagaacaccg agcgtctgca gcgatttgtg cagagctttc taagtttcag cgcgctggaa
    14461 tcgggccgcg tggaggccaa caaggaaccc ggcaacatca accgctgcgt tgccgaagtg
    14521 gtcaaaaact ggtcgtcccg cttcgccgat cgcggtacga ggctggacgt ggtggtcgat
    14581 ccggaacttc cagacacctg gttcgactgt ttgaaggtcc agcacgtcat ttcaaacctt
    14641 ctggacaacg cgctgaagtt cgcgcccgaa ggtggacagg tcaggatcag tacggggctt
    14701 catcactggg agcgccgcag tgtcctgcaa cagcttgcaa acgcgcacga acggcgcacc
    14761 gccgaaccgc aacgctcgca taactgcgtg cggattgatg tatcggataa cggaccgggc
    14821 atcgcgccgg aatatcatca cgagatcttt gaagagtttc tgcaactgca acccagagca
    14881 ggtgtagaag gtgtcggact tggcctggcc atcgcacgcc ggcttgccga agcgcatggc
    14941 gggaagatct gggtagagag ctcgctcgga aacggcagca cgttctcggt gctgttgccg
    15001 aacagctaaa cggagaaaga gatgaatgtg gtagctggca ctccgtcgaa agcaagagtc
    15061 ctggttgttg atgacgaacc agggatgttg ctttatacat caacgctgct tgagacctgc
    15121 aactatgccg tgcagacggc ccggagcgga ccggaagcgc tgctcaaact gcagcaacag
    15181 cgtcctgatc tcatgctgct ggacgtttcc atgcccgaga tgaacggcct ggagacgatc
    15241 caggcagccc ggaggctcta tcctgatcaa cgcgtcgtga tggtctcctg cgtgagcgag
    15301 accagcaccg tggtccaggc gatgcggctt ggcgcgctcg actacatgac caagccgatt
    15361 tataaggctg agcttgaggc tgtacttgcc cgcgcgttgt cgaaagggtc tttagccgac
    15421 gaggaaatcc cgaccattca cttcaccgcg gtgaccgacc aggaaaacgt tgaccgcatt
    15481 gatgacgata tgttcttcct tgccgcgagc ccggcaatga agcagcttcg cgcgcagctt
    15541 tcgatcatct ccaaggtcga cgtcccgatt ctcctgctgg gagaaagcgg cgtcggcaag
    15601 gaagtaatgg cacgactgat ccacaacctt tctccgcggt ccggcaagcc gttcgtaaag
    15661 gtgaattgcg cagcgctgcc gctcgacctg ctggaaagcg aattgttcgg ctatgaggcc
    15721 ggcgcgttca ccggagcgac caggcagaag ccgggcaaat tcgagatcgc caaccagggc
    15781 acaatttttc tggatgaaat cggcgagatg aacccgctgc tccaggccaa actgctccac
    15841 gtactgcaag acggcgagtt ctcgcggctt ggtggccgcg gcagcgtgcg cgcagacgta
    15901 cgcgtgctgg cagccacgaa cattgacatt cagcgctcca ttgcccaacg cactttccgc
    15961 gaagacctct attaccggct gaatgcattc accctcaaca ttccgccgct gcgcgagcgg
    16021 cgcgaagaaa ttcctcccct gcttcagcag tacggcacgc gttacgcgaa aaggtatggc
    16081 attctccagc caaagtactc gcagtcattg caggacgcgt gcctcaggta tcactggccc
    16141 ggaaacctgc gcgaactcgg caacttcgtg aagcgcttta tcgtgcttca ggacgaaggc
    16201 ctcgctatcg cagagctgaa gcagaagggg ctccctgatg ctgcgcaacc gggggatggc
    16261 gcgttcggaa gcggtttccc gaatggattg aaaaccatgg tccgcaacca tcgcgatgaa
    16321 ctggagatta aggttctgca ggaagcgctg gagatgacca attggaaccg taagctggca
    16381 gccacgcgcc tccatatcag ctataaagcg ctgctgaaca agatcaagca gtaccggttg
    16441 atcccgccgc ggcctttcta gcgacttaaa tattccgcag ccagcgcggc ttcggccatt
    16501 cagttgctac cttaattgca ccaatatcga gttggaaagc agcacacaag cttgccaact
    16561 ggtgcttcca tggagtagct gtgcagttga ccaggttttc ttccggaatt ttctttgcga
    16621 tccttagtct cacattgcat gcgcaaacag tctttcaccc aggcactacg ctcaccgcgg
    16681 aacagtccgc caacaccagt gccgcagatt cctttcccgg ccagaagaac ggcaacatct
    16741 ccggccgcaa tgtgagcaag gttcccacgc gcacactgct caatgcggga tcaaccgcaa
    16801 agctgttcgc gcaccttgtt ccgtggttcg gctttggcaa ccatgtggat atcggctaca
    16861 actcgagtga tattctgcag gtgcagaagc aggttgcgga catgataagc cgcggcatcg
    16921 atggcgtgat tattgactgg tacggacgcg ccacaactca gcaccattac gcatacgacc
    16981 aggccgccca agggattatg aaagaagcag agcagcatcc cggcttcacc ttcgccatca
    17041 tggcagacgc cggcgctttc cgcggttgcg agcaacacga ggatggcgac tgctccccga
    17101 cccacctcct gatcaatgac cttaattacg ccttcagaac ttacgagaac tctccggcat
    17161 acttgcaggt gaacggtcat cccgtggttc tgtttttcgg tcaagagcaa ttcgcgattg
    17221 attgggacaa ggtgcgcaat caggttgctg gcgagccgta tttcgtattc cgcaacgctt
    17281 cgggcttcac cgcggatgcc agcaagggcg ggtactcctg ggtttcaccc ttccaggccg
    17341 gccagaacga cccctccgct ctcggctatc tcaagtactt ttatcgagcg gcgcggcaga
    17401 acggcgattc aatcccgttt ggggccgcct acaagggctt cgacgactct attgccttgt
    17461 ggtcacagaa ccgccgtatg gatcaacggt gtggacaaac gtggctcgac agcgtggcgg
    17521 aagttcgtga cttggcggct caggggcagg acctgtttgg gatccaattg gtgacgtgga
    17581 acgactatga agagggaacc gagattgaga caggcatcga caactgcgtt tcactcaggg
    17641 catggacgcg gggagcgctc ctgcagtgga aggtggatgg caatccagac acgcttgacc
    17701 acttcacggt tttcatctcc caggatggcg agcatctgat ggcgctgacc aacctgcccg
    17761 cgagcacgac ttctctggac ttacagagct ttggcctgcc ggagggcgct tacacggctt
    17821 acgtgaaggc tgttggcaag ccgtcgctga caaacacaat gtcagaaggt gagcgggtag
    17881 aactcacatc ccggagcgat ggcccggcat taagcgtcgc gctctccggc accagcggcg
    17941 atgcgccgct gcacgtgagc tttggcatca acgccccaga ccacggtaca gctcccggct
    18001 cgctgcaggt tgattttggc gacggcagcg gagcgctgaa cagcgaatcc ggtgaacaca
    18061 tttatgcact tccgggaatt tacagtatga ctgtaatggt gggagatggc ggcgggagac
    18121 gttcggtgca gaacttcacg gtacaggtga ccgcacctgc aaccgcgagt tcgggcgcga
    18181 attcggggaa agattccgat tgagcttccg gcaactcggc gcgccgtcca gcatctcacg
    18241 tcttggaaaa gctggcgggc aaaccgatgc cgggccggga ggaacatgga aagccgttcc
    18301 agcctgatac tttgcgtggc agacagcaac ctgcgactgc agtacctggc ccgcgcggtg
    18361 aaaaaggcag gatgtaactt cgtcctgtct aactcggctc acaacgccgt ggcgatggcg
    18421 gcaatcacga atgaactcga tgctgcggtt ctggatgaag acatggtact cggcgaaggc
    18481 tcggttgcgg agtccatcaa ggcggtgaag tcgcttccta ttctcctggt ctgcgatgcc
    18541 ggcccaaccg ggccgaaccc tgcaggggtt gatctgatca ccgccaacgg ctcccgccag
    18601 cagatcgcag ccgcccttca caagctcctg cagcccaggg tctcgacgtc gcgagtgatc
    18661 tctcgttaaa gttttttccc gagaatactc gtctataaac attttgtgcc ttcgacttcc
    18721 ttggtcggtg aaggcatccc cgcaaggatc aagtatgtgt tggcagatcg attccttccc
    18781 tcaccatttc ttttcaactc actgtcgcgt gtagagcggc cattccttgg cgcatgatca
    18841 tccaccggtg acacgagctt gcggtagtaa aagccgaatc ggaagggggt gtgttgcgga
    18901 agcgagcatc tacaaagccg cccgggctaa cagaggcttt tgttgagtgt tcactacctc
    18961 gacgaatcga gcgatttatt tgtttgtgag gattgtgaaa tgtttgcggc aagtattgtt
    19021 cgaatcgctt attactttca ggctgttatt gttacctacc gtgaatgcgc ccagcggagc
    19081 atagtagtgc tggattccgt ccgggggctt tgaaagcggg gtcacggtcg tgttcccctg
    19141 gttgtcggta aaggtctcgt tcggccactc cacgtcggcg gtggcggtgc gcgcgggtat
    19201 cagccagtag tcgccagtgc gatattcatt ttgctgtcca gcgggggccg gctgaaactg
    19261 cacctggacc cccttctcca gctccagcca cagatttcca tcgctttcct ggatcaaagc
    19321 ggcattgtca gagccaaggg taagccctcc ttcagcgggg tcgccttgtt cctggtccca
    19381 gcggcgcagc agcgggtgtt tggctggatc attgcctaca attgcatctg cctttcccgc
    19441 cagcgtgacc tgcagccggc tgcggttaat cgactggacc tgcagcagcg tgcccgcctg
    19501 gttacgcagc acgtaatcat catcctggat ttcaacccaa tcttgttcgg tcaggccaaa
    19561 gcggtcatcg cgtcccaggt ttgccagcgt gagcgttgtg acgttgtctc ccggcgaaat
    19621 ggccacaatg ggaaatgtca ccgagccgtt ttcgcgcgac cacttgaagg tgggtccgtc
    19681 cgctggggcc gccttgcctg tcctcaccac gccaatgcgg tccgtcgtat tgcggaccag
    19741 gatgccgctg gtggcgacct ctcctcctct gtggacttcc actcggtaaa gctggttttc
    19801 ttcaccgttg taattggcgt ccggcgcgat gagacaggga tcaacgggag tggatttctg
    19861 catcgccctc gctctcaggc gcccccgata aggagcaaac agcgtggaga gcagattctt
    19921 gtcgtcaggc ttgaactggt cgcagggagt tttctgatca gccattgttc cctttgtaac
    19981 cttcacctgc caaacaatct gtgctctggt cgcagtgtcc ggcccgccta gcgccacctc
    20041 ctgaatggag gaatcctcaa tccatgtgat gtgccgctcc cagacgtcca aataagccag
    20101 gtatcccgaa ttgttgccag aagtctgccc cagcgcatcg ggctccggaa ggttgggctg
    20161 cgtcagatag gtcaccacgc ggcgcataca gggattcacc gcctttgtga gggcaatggg
    20221 actaaccggt gagatcgtca gcttgcgccc ggaaaaagtg gcggttttga taatggcgag
    20281 tgtgggggtg attcctggcg tcgcgaatgg ctggggcacg ttgtcgaaga tctccaccac
    20341 ctggtcttgg tccagcgctt ttccgtccag cgtccactgg ggcaccacaa gatcattggt
    20401 gttgttgggc gaggaaatag gaatgacttc ggcttcggct tcacatggca tgccattcac
    20461 gtaatatcgc cccaggccga tccggaaatc gcctgtgacc tgatcgagcg cgctgatcgc
    20521 aaatgcgtga tcgtccggac cgcccgccgg cccaatcagg tccgcgccca gcgtctgcag
    20581 ataccgcagc aggatcgcgg cttgttcgtt ccagtcgctg tcaagttgca cccgcccttg
    20641 ttgcatcagg acacgggtga aatgcttcag tgggtgaaag gtgttgcgag tcaggtcggc
    20701 cttcatggag ttcctcttag ctagcgaaga tgatgccgga gttcatgccg gctggcgtgt
    20761 attcatccag gcgaacgcgg aggctgtccg cgcgctgggg ttgatagaga tcgtgaaatg
    20821 cccccatttc ggattgatcg tcggcgccgc gggtgatttc agtagcgcag gtatcggcaa
    20881 gctggcagta gctgggtgat ccgtagcgca tgctgttgaa gtcaggctcc acgcgcaagg
    20941 ttgcgcccgc taccagcgcc tctgtgtcga cggcggagag cctgtcctgt tgcgcttgga
    21001 ccgttgcggc gcgtatcacc atgtcaggct ggcattcgta gcgcctcggc gttcgcgagc
    21061 ccggagtcac atagcaaaat cgaatgcatc cctgctggcg gcggcagacc agcaggcgcc
    21121 ccatcaggat gctattttcc gcaagctgga tcgcgtgcgc ctggagttgg ccgaaaaccg
    21181 tgcagcgcag gatttccagc gtcgcgtagg cgcacagctc ttctgtcgcg cccaccgcca
    21241 cttcggtgac gctggtagag tccaggatgc tatcgcttag gtaaatccgg cagggatctt
    21301 ctttcacctc gtcgcgctcc acctggatgg aaccgataat gctgtgctcg atgcgtacac
    21361 agtccggggc atcgtcgagc tccaggctgg gcttgcccgg ataaagaggt tcacagtcac
    21421 aatccacacc ccagccggga accagagtag agtggcggat gttcaccccg gcgatggatg
    21481 cctgtagctg caggctgctg ccggtcacca caatgccatc cagagtgaac cagcagctag
    21541 cttgcgctcc ttccgctgct tcgcccgcga tgctgaaggt ttccgaaagc ttgataaccg
    21601 gccgcttgcg attcgccgcg cgcagttgca gggtctgctt tggtttcagg gtgagatgga
    21661 aggtctcggc gtagacacca ctgtcagtga tctcgatgac ggcattttcc ggggcgtctt
    21721 gctcccattg cttcaacgca tcattgatgc gggtgaaaga ttcaccgcgt ccgaccaggt
    21781 acaggctgtg cgacgctggc tgcgagagcg gccggttgta ttctccgccg ccgatctcgg
    21841 cactgaatgc gtagttatag gaaacccata cgctctgccg gcgcgggtgg ggagaagcaa
    21901 ataccatccg tcccagctca ggatccacgg ccacctggcc cggtttgggc gggcggaacg
    21961 tccaggctct gaggttggcg acaacaatgg attcgggcgg caccaacttg tcgccgactc
    22021 ggatcgcaaa actcttgtcc tcgccgtaat aaaacggaac gccgctcacc tcatgcgtcg
    22081 acggcggaag cgctttgcgc aacttcaatc cacggcgcgt gatcggaatc ggcaggttga
    22141 gatcgccggg cgggtgcgcc gtggtggcct gaggccggtt gtaaaggggc atgttgtgcc
    22201 ccagcgtgtt gaacaggaaa taatgcggat tttcattcag cggaaacgcc ggtgcgccgg
    22261 tgatggaata atttctgaga cgccacacga aaagtccggt tgaaggaacg ttatagcgcg
    22321 agggaagatg ccgcgcaccg ggtgtgcgaa cgtctacggt gtgcgctgtc tcctcaaatc
    22381 cgccgcctaa ctcctgcagt gcaaaaccgt tgcgcacgtc caaggtcagc ccgcgatcga
    22441 ggtgaagata gttgatgttc tgcgtgtaac tgagaaggcg atagaactcg atggcccgcg
    22501 acggccagcc ggcgactgct tccgccagct cttccagtac cgccgccgtg ccttttcggc
    22561 gacgaaacct caccgtgttg gccacctcgc tgcgcgagat caccgtccgc tcgcgagcca
    22621 gcgcccgccg gttctttaca tccaccggct cgcccgtgga agacgcgggc gcgtagccca
    22681 ccaggtctcc aatgtatgga accacccagt cctggcaagt ttcaatgaac cagttctcgt
    22741 agagctgggc aatgtcggct tccacgacgt tgacctgctc ggaaatcacc tgcagcagcc
    22801 cgcgcagagg atagccgagg tcggcgtctc tcatgcgatg caccaccggc agcaggttat
    22861 acaagcgatc agccatgttt gcgctcatgc gggaatctcc gtcaagatca aggtgtctgg
    22921 cacgctgggc gtaagcatca ccagctctgc cggcagaatg gagtgcgccg ggtccttggc
    22981 gcctttgttc ggcatagcca tctcagcccc gacaaagtcg ttcgccgtga gcgtggaagc
    23041 aaggttcgcc agctccgccg aggtggtatt ctccgaaaca gagtcgaaca cccgcaggtc
    23101 gacgtactgc actcccggca ccgcctgcat caccgcatag gtttcgctct tgaaagcgct
    23161 ctgccccagc gccctgcgct cgaagctgta aaagtccagc agcgcgtcct tcacgttggg
    23221 ccccactgat tcccactggt agtccggcag caccttgact ctggcgttga tcaccagcaa
    23281 tctcagccgg cgcaccgcca gtcgcaaagg ctggtatgga tcgccatatt gttcgagcgc
    23341 ttgaaagagg ttgcggtaca ggtccgagtt ttcgtcgatc gggatatcgt ctttgccggc
    23401 aatggtgacg tgcacgagca aggtatggcc gtcactcaag cgagcggcgg cggccttgcc
    23461 gattccggca taggtcctgg caaagtcggc gtagtcgcgc acggaaacaa gccggtcaag
    23521 cgccatcacc gccaggggcg cattgctgcg cgcctgatcg agcgtgtcat ggtcggcgcc
    23581 gcccgaagcc cgcagtgggt tgatgacgct cttgaccccg agcggctgcg aagaaagctg
    23641 gctgatctgc tccgcgtcca cattgccaac cttgccgcag ccataccggt acaccgcttt
    23701 gatgttggcg gtgccggtgg gaacacgtgc gccgtgctcg ccgttgccga aaatcgtggt
    23761 tacctggtcg tcattgtcgg tctgtgtgat aaatttccgg tctttcggcc ccaggaatgc
    23821 caggttgtca gcctcatgcc actggatctc attcacgcgc accgccagcg tgctttccgc
    23881 gccggaggga gtgggcgcgg agagatatgt cagcggcgac tggtgcagcg cgaactcctg
    23941 cagcggctga gaggcatcgc cgttgccaag tatctcgccc gtggtctggc cgtgcgtggc
    24001 cttcaccacg ttgccgtaga tggtgaccgt ggcagggtca tatttataag cgagatcgtt
    24061 ggccagcgtc aggatcgtat gtacgtcttg cgaagaaatt ctccaggcaa agaccggcag
    24121 gcggttgccc tcgcccgccg cggtaccttg aggaatgatg ccgcccggat agggaacctt
    24181 tgtgtccgga tccaccagca gcccggcaaa atccgaaaat tccccatggg cgtcgttttc
    24241 gttcggcacg tagacattgg cataaagtcc cggcgccaac tggacctgat cgcaaaattg
    24301 ccggttaagt gtgcttgcgc ggttactgcc aaagagagcg cgcaccactg caaggtcgtc
    24361 tggggtaatg aatcccacca cgagccggtc accgtattga ttagcgtcag tggtatacgc
    24421 atattgcgcg agcggctgga acccgcccgg aaactgctgg cagaagagcg gccgcgagcc
    24481 ctgcgtcacg ccggagacca tcaccagttc gcttgctgtg acgccgctgg tgttgggaat
    24541 atcagtgcgt tcgccggaaa caatgatcca ccgccccgcc tctaacccgt catatagctg
    24601 cgccagttcg attttgttgc cttccacgtc gctgtcgaga ggctcttccg aaagttcaag
    24661 ctcttcggcc tgggcgtaca ccaaggtgga gcggatgacg ctaaagtcgg ggctcggatc
    24721 tgtgcgatcc gcttggctgc tgtccagcca gttggtggag cttgctggat tatccggctc
    24781 tacgagcata atccgcgtag tttttcccgc cattccgtaa tccgctcgcg agagcgttgt
    24841 gaccgcgccg gtcttggcat aaagcagacc gggcgacgca acgatcttcg ttgtgctgct
    24901 cactccgctg gtatcgacca ccacccaact gccgggacgg actttgtcat atgccgagtc
    24961 caggttgacg atgttctgct gctcgtggtc aaccgcggtc gttgcacctt catagaccat
    25021 ccactcgtgg aaggtcgggt tgccgtcttt gactgtgacc ctgaagggcg cattgttgcc
    25081 gaacagctgc gcctttaccc gcatggcata aacctgcacc tggccggtgg gcgtttctac
    25141 gccggaccac gcagagtata tgttctttgc ttccggccgc agcaccgaga gcaggcgcgg
    25201 agcaacgtcc gcctgcggcg caaaggtctg ggtaaagttg cgcgcaagct gccactggtt
    25261 cgccggctgc agcgatgccg gcttggccag cgttccaata atattagtga ggttttccag
    25321 aggtgaggcc gaaagcccgg actgcagcag cttgactccg cccagcggga tcttgacgct
    25381 ctctactcct ccttcggaaa aggtttgcgg ctgggtattg agcaaggcag ggacgagtgc
    25441 gtccaccgtc tctttcagat cggccagcca tggcttcacg cgggtaaatc tgcgccgggc
    25501 ggcaatgctt tgccagtttt cgatttccgc ggcaaacgac tgcgtcatgt cggaagcgtc
    25561 ctgcccggag ctggcctggg tgatgttgtt caacagggtc tgcagagcaa gcaccacttc
    25621 tgccaccagg tcattgccgg tgaagatggt gacggcttct tcggcgtaag gcagcaaagc
    25681 gtcgcgcgcg gcctggaccg tatcagtaga tgaagcttta agcgggcctt cttccagggt
    25741 gatttcggtc cggttttgtt gcgtctgcac atccacggcc tgtaccttgc gtagtacctg
    25801 ctggccgtta ccgttcccca gcacgaacaa caaggcgtct ccgggattga gattggtggc
    25861 gatgccctgc aggtaaatgg tgtctcgcgt ggctgcatcg gtccccacgt ttgcatcgag
    25921 cgtgatggtc tgcgggcggg tcagacgcgg cagcagattg ttccagacgt tccgggccgg
    25981 cagtgtgtca gaggtttcaa agaactgcgg tttttcgccg gggccgggaa tgctctgtcc
    26041 gcgtgttcct tgcggaatat cgccctggaa cccatcggcc acggtgaacg ccagatacac
    26101 gctggcggaa accgcgggac gcaggcgata tccgatgagc cgcgctagtt ccagtactga
    26161 ccgccgctcc accgccgtgc gcagaaaacc ttcgttcgcg atccgttcct ggtagaaggt
    26221 gagcacgtcg gcgactgtgg cccaggcgtc caggagcgcg atggaaggat cgtccggctc
    26281 gcgcgtggtg agcccggcca gcgggcggat gcgaagcgtg tttccgctgc cgtcggtcgc
    26341 cggcacgtcg atgtaaagcc aggtaagccg cgcgatcatc gattccaaaa agctctggtg
    26401 cgtcccggcc cggtacacaa gcgccggcag tcccgggcgg ttcgtttccg gagccggcgt
    26461 tacgacttca atccctgagc agcaaccgca gggttgtttc atctgccacc tcgcacgttg
    26521 aggaccagac ggccgttttc aggaaagttg ggatcgttat ccagccgcgc gatctccaac
    26581 ggtcccagtt caagcacggc attgtcggga acctcttccc cttccacatc gtcgagaggc
    26641 tcgctgattt caaagcgctc caactcgttg atggtcacgt ccatcacgcc gggaactgac
    26701 tgcactgcgg cgagcaggcg actcacatag atgccgtcac cgaagctgag attgtcagga
    26761 tggaaaaagc cgaggcggcc gtccggcagc ttgcggttgc ttagcgcgtc cagcaccgcg
    26821 ctttcgacgt gtccgcgcag gtactcaggc agcacgcata tggtgagcgc gagcgtgatc
    26881 ggcacgtaat gcgctggcct taccagcagg tcgtgtccga tgcgccggaa cggcgaaata
    26941 taatctgtga tctcgctgat cagcgactcg tccgtagtct ccgtgtcctc gggatcgagc
    27001 gccacctgcg ctgtgtacca gcttccgttc cagcataggg agctcttgac cgcctgcatg
    27061 gggcggaacg gctgcatgca gatcgccgaa tcggatgcct ccagcagcgc ccgctccttc
    27121 cagcgtcgtg cgttgtctcc agcgatcgtc gagtaatcgt ccgctgtgac ggcccgctcc
    27181 aactcggcct tgaaagcata aggagcgaac tgctttacat catcgattgg ctccgcatct
    27241 tcaccgccct gggcggcgaa aggattgcgc ggcgtgatag tgatcccgct cagcttgcta
    27301 ttgcgaaaga cgatgtagcg gattgtctcc gcgcccacat tgcccgcttt gctattgcct
    27361 atgcgatagg ctgctctgaa agccgtgccg gcttccggct gccgtcccag caggccgttc
    27421 ccgaaacgaa gatgcgcata cccctcgttg tcgatttcag ccacaaagac gcgatcgtcc
    27481 ggaccgctct ccagcaggtc aggcaaaggc gtccaggttt ccagcaagcc gttaaggacc
    27541 tgcaacaggt ccgagcgcag cggatccttc attgcgctgc ttccatccca tgcctcgagt
    27601 tcggcgatca gagccggggc aagctgcgcg cgcaggaacc ctgcggcagt atcctggcct
    27661 ggatttttta gccgacgggc gagcgccgac gggtcgtcaa tatcggcgaa gtcgaatagc
    27721 ggtccaagtt cgcaaggcac tgtcggctcc ggattgtctt tgcactccgc cagcagcaac
    27781 gcttcagtgc tctcggtcac cgtcactgtg ggctgggcgc attccggcgc cggagggatg
    27841 ctgaggagag aaatccaggg caaacactgc cgcgggtcct gatacaggta tcccgaagcg
    27901 gagcacggcg gcggcagagg ctcagcaaag gtcagcggct gttgtgagag cacagggcga
    27961 aacagtcccg ggagcgcctg tgtttccgcc ggagtgcagc atgatggaca cctttcttcg
    28021 gtcgattgcg ttggaacggt tcccagcggt tcaccggcgt taatgccgtg gtccaccagg
    28081 atgacgttgc cccgggcgac gctcacatcg ttcatgcaat cgcatttcgg cggcggcgcc
    28141 ttcgaagaga tgcagagcgg gaaggtaagc gcgtcggcga tggcccattc aatttccagc
    28201 accggctggc cgtactgcgg gccgaaggtg tccttgtaag gatggtaaag cgggtccaca
    28261 gatgggctga ccttggtaag cagcacagcc tggcggtggc ggtgatcggc gtcattgcag
    28321 ttgccgtttt tcgctccctt gatctcttca aaaatgagca cgtcgccgat cttcagcttc
    28381 agcgcgcgct ccgtgttcgg cggcccatcg tcaaggccgg gtgccacttg cgccgccgat
    28441 actttggggg ccccggcaga ggcagaactg ggcacggaag catcgccact cccagctttg
    28501 cccttgttgg cggaggccgg aacgtcggcc ggcttcaccg gtgaaggagc gcccgtttgt
    28561 gaagaaggat tgtcgtggcc tgagttcgag agcagggcca gccagttgtc caccagcgtg
    28621 gccgacgtcg cgcccaccgg caagcaacat tcgcaatcgc cccaggtata gaagctgatc
    28681 cggttatgct cgggatggac ggtgatcgtc tctccctgtg cgccaatagt cctgggctgg
    28741 aatacctcat aagaagacga gggcacctgc tccagaaggg gctccgccaa catcgggtct
    28801 tgaggtgcgc tgggaaaggg cgtaatgaaa tagatctgct tcaggtcaag atcctgtttg
    28861 gcggtggttt gcagcgtgag ccacgcgcgg gcgttgcagc cgtcatgcat ccggtagtcg
    28921 accaggcgcg cgtgccgccg cacggaaatc cgctcccggg cggtccccag gtaggcttcg
    28981 gtcgcgacgg cgtcctggta gtagctcaga tagtcgcccg cgtaggcaag tagttccacg
    29041 agcgtgactc cgatgtccgg cacatgcccc tcccgccagt tcggcatgat gagagagagc
    29101 cggtcgagca aaagctgctt gaagctcgag taatccttgg ctagataatt gacgtccggc
    29161 tccgtacgct ccggcggagg acagccggat tgcggcttgc aatcgagatc gctgggacag
    29221 ctcgctttga agctaaagca gactttgcta tagcgctggt cgaagccggt catcggggcg
    29281 cccgtgggac ggccctgtgc atcggattcc accacgctca gtgtgtaggt ggagaaatct
    29341 ccgctcttgt tgacgtccac ttccatatag tcgtcccgct cggggtcatc caggcggaac
    29401 acgcgcaaat ctgtgatctg tacgtcgcgg atgcggcggc cgccccccag cgccaggttt
    29461 tctttttcga atttcggcgg catcttgccg agaaaatgaa catacagagt gcgctggtcg
    29521 tcattctcta tgctccccac ctcgacataa tccaggccat acaggctggc tgcgcggacc
    29581 gcttcgcgcc gctcttcttt ccggcaactc agatcagcac cattcatgga atactccggc
    29641 agcgccccgc ttcatgcgct ggtggactct tgatgagctt tgggaacttt gtttagggaa
    29701 attgcgtgcg agctccggct atgcggccgg cgcgctgcga atgaaatttt ccgtatggct
    29761 gtcgcccgtg agcctgacga cgtacttcac ggtcacgttc agcgatgcat cctgtgaagt
    29821 cacttcgaga gactgcagat caatcaggtc gcccaggtag cgttgcaagg cggcctgagc
    29881 cgtgaactgc agggccgccg ctagttcggg gctgttgggc gcaaacacca tctgcagcag
    29941 cccgctgccg aaatcagggc gattgacgcg ctcacccgga ctcgtgaaca gcaactgctc
    30001 aatcatgtcg cgtatatggt cgtcaacgcc ggtggtagcg gtacgacccc gggaatcaaa
    30061 gtgaaatggg aaatcgatat tcatagtggc cctcgaattt attgcagtcg ccgtcacatg
    30121 gccgtggcgc gaagctgagt caaggtgatt acaagaggtg tcccggtagg cgtgcagatc
    30181 gcctgactgc tctgcaccac aagcggctgg ccgttggaaa gcacgcgcgt ggttcccgtg
    30241 ggagggatcc acgtggcatt cacgcatggg ccgtttccgc ccggcggagg cggaaacgca
    30301 caccccgcga cgaggtaagg acctgcgacc gtgaccgtag gctggccgct gaccatgacg
    30361 cgtggattgg ggacagtcgg ctgcgcctgg ccgccatgtg agcacagcac cgtcgctccc
    30421 acgtgcacaa gcattcccgg catttaagtc accaccaaag ctactttatt gatcattacg
    30481 ctcgggccga cgagttccac ggtcgcgccc ttgccgttgt tgatgtaaat cccggtgtcg
    30541 ttcacgacga tcatggcgcc agttgggctg cgcagcacga tcccgcctgt gcccggcggc
    30601 gctggcgcgg gaatcggggc catcatggga ataggagttg catcgctgat ggacatcaga
    30661 tgctgcaagc tcgtctgaaa aacaatgttc tgcccgggcg ggatgggcgg cgtgagcgct
    30721 gcgagcggca gttcgtatgt ctcctgccag aaggcgccgg tccaaaccgg gcggtcggga
    30781 tcgccagcct cgaactgtac ccagaccatg gagccgatcg ggggtaccat gtaggtcccc
    30841 atctgcctgc cggcgagcgg aacgcaggga ttagcgtacg tggaaggcgt gaggccgctc
    30901 acgtccggta cggaaacgat gatccgtccc aggttctcga gatcgacatt gttcacaacc
    30961 gttgcccgat agattccgta atactttgtg ccttctctca tacactcacc gtggaaaccg
    31021 aggatcccgt accgccgcgg gacagagtga aactctgctt gtactcgccg cgcttgatgt
    31081 tatgggtaac gctttttacg tagtatttgc cgtcgtagta gtcgccggcc ccgcgaaccg
    31141 cggccagttg ccgcgccttg aagactctgc catagcgcag cacgtccagt tgaccgctgc
    31201 cgctcaccac gtcagccgtc ttgaacagcg ccgccaggcc ggccagcgcc gcgcccgccg
    31261 gagtctcatt tgctgtgggg gtaagctgct ggctcttgag cggtgtgggc gcatgcgccg
    31321 ccatcggcgc cttcagcagg tcaatgttcg gcaccggaat ggggatgggg atctttgtat
    31381 tgggctcgat gatggttacg aaatattgtg tggccagcgt tccatcgtag gagaagctca
    31441 gcgaatcgat gttggacgtt gcgtcgaaat tgatgctcaa cgctggctgc acgccgccga
    31501 ataacttgct gaggtcggga ccgtagtaag ccaggctgcg tccgggctgt gggccgggat
    31561 cgagatagaa gacggctcca tcttcctgcg ccagacttgt cacgtaaccg tagtctgtcc
    31621 cttgctgttt gttgaaatgg tcgagcggat tttcaaactt ggggatgctg gctggaagcg
    31681 caagcggcac cacgcccagt accaggtact tggccaggat catttctacc actacaaagt
    31741 tcggcagcgc cggataggga atgcccgtta agtcgatgaa gtccatcagc gcggtcaggt
    31801 ccagcccggt caccgtgagc gtggactttc ccggcgcgct gctcggggcc aggtcctgct
    31861 tcgtgataat gccgtccatc aggacttcca ctgaaccgtt gaccgtgacc gcgataatca
    31921 cccggcgccg cggatcgaaa tagccggagt tgtgcatctg ctgcaccggg gaattcttgc
    31981 ccaaggtgaa cttcaattga aatccgccct ggctccccac ggtggaggag acctgtactt
    32041 ctgtcaacgc gtcaatcacc ggctggggcg ccgggtcggc attgaacgag ccgatcatca
    32101 atgtgagata aaatccccgg ttcatagttt cgatcccgag atcccctgcg gaagcgtgat
    32161 gcgcagcctg cgcccgatct tctccatcag ctcttcggga cgcatggcgg agttggcgtc
    32221 cgccacgcgc cagaacagct caggatcgcc caggtagcgg gctgtcacgt tatcaagccg
    32281 ctcgtcctgg gtgaccgtat ggtattgcag aagctggaac ccgtctgcgg ccgggacgaa
    32341 acggcgcact atataaatga tgggccggcc gtcgctcccg gtgagagagg ccgtgtccag
    32401 gccgtaatac cggctggtag gcgcgaacag cgtgcgctgc agcgcggttt gcgccagcat
    32461 cgcctgcact ggatcgttgg ctaagttgct gttgctcccg ttgctcatgg aatccccctg
    32521 atgcccaggg ctgaaaacgc tccgccctgg tacagccgtg ccaggctttc tttttgctgt
    32581 tgataaacca tatagaggct gccgcccttg tcagaaaagt tgagatcgtc aatgctgagc
    32641 accctcatgc caaggcttac cttggcgcga atcgggttca gcgccgggtc aaatgcttct
    32701 tccgtgatgc tgaaatcggt cagccgcacc ggcacaatcc gccgggcgct ccacacgaat
    32761 aatgtgaggg gggcttccat cggcacgatc tccagcgtcc cctgctgcga caggttgaaa
    32821 ttgttctgca gtgaggtgct ggtggggtaa acaatggttt ccagcgccga gatctgcgga
    32881 aacagcccgt tctgggccac ggacgggttc ttgtccggaa actccagttg gtcggtggcg
    32941 tcgagttcag cgtcgagctt gaacgtctcc accggcggcc ctttcaggcg aagcgcttct
    33001 gagcggtctc cgccctcttc cacgccctgg atcttcagcg tgcgcgaaag cgtgtcggga
    33061 ttgtattgca gaacaataat gccgttcggc agcacgttga aggtatccgg atcgagcagc
    33121 acaaggccgc ctttgaggat gcgcggtgaa ccgggaaatg tgctcatgga tgatgccttg
    33181 tcacttcagg aaatccgtta ctgactgcag agctgaatta tctaggttga gatatgacta
    33241 gcggccgctt ggaatcaacc catgcaagaa atcggatacc gcctcaacag ctgatcccag
    33301 tacagcccca cccaccgtgg gcggacatgc gctcccaaca cagaatggca ccgccccttt
    33361 catgcctgtc aactttcgaa tctcagcgaa gacgctatta tcgagagact tgacgcatcc
    33421 gctgctgacc gcgtctttgg gattgccgcc atgcagaaaa aaaccgtcac ggacagcttt
    33481 cttgccggaa ggtgtaacca cgactttaga tccttcgatc ttgatgcgca tcggtcccca
    33541 acagtccaca ggggtgtagc agacccgcgc gggatttgcc ttggttgggc agggaacatt
    33601 gcagtaatgg gcgagcgagc agggagtcgc atccgtgctg gtgatctgtt gaaatccggt
    33661 accgatgccc gccgcaccgc aaacgccagt ctggtgtttg gcaacggtag gctgggttat
    33721 acccggatgc atcatgtaat ttcccgtggg aatcggccca gaaccgggct cgttctctcc
    33781 acgtcctgga tgtcctgata cggcgttgac cgtcttaatc agcgtgcctg cctgaatcac
    33841 gttgatgacc ccgctttgtc cgccggaata ggccacgatg tcatctttgt gccgatgcag
    33901 cctgccgtca gccgctctgt tgccaatcac gacaggccta tccgccatga cggcacgagc
    33961 tgtcgaatcg gcttcgtatt cgctgggatc attctcactg acgaagccgc tcgcctgaag
    34021 agcgccggct gtaccactct gctgcacaac gtgcgtcagt tcgtgtgcga gcaggtggag
    34081 gccatgactg gttcccggag catactttgc tgtcccaaac accacatgat tgtcggacgt
    34141 atacgctgtt gcgccgacca tccgggcaga ttcagccgct ttgttgtcag tgtgtatgcg
    34201 cacctgactg aagttgcgcc ggaagcgagg ttccatgaaa gcccgcgtgg catggtccag
    34261 cggatgaccg ggggagcgca ctacatcgtg aaccattgca ggtatttctc tccccgccct
    34321 gcctgttgcc tgcctctgcg ggatatcgtc attcttcctg cattcttcgc attgagctcc
    34381 gcccgtgtgc tgaccgcaag agcactggcg ctgcaacaga agaggagacc tgctcggaga
    34441 aacagggcat cttgtccgcg tggccgttga atttatccgc atagcaaacc tacgattcag
    34501 ggaaggccct ccacgaaact gaattagtcg tgccagcgag tgaacgctga aagtgcgcga
    34561 tcattagaag gaggtttcaa gctagaagac ctacgatcag tccgccgacc aggccgacgc
    34621 cggcgccaat ggcggctccg taacccgcac ctgctccggc gccaagtcct gggatgtttg
    34681 atccgatagc tgctccaatg cctgctccga ttccagcccc agccgccgtc ccgactgcca
    34741 aaccaattcc cacttttgct ccgcgcgaga gccctgcgta atcaccggca tcacctcttg
    34801 ccttgatcgc attcgccctc gccaaataag caggaccccc tgcgctatag gccctgtctt
    34861 cgcacgcccc cggacacccc atggcggtat ctgtcgaact cgtcactcgg gccggcacct
    34921 cagcaagata ggaccgtacg gccgcgatat ttcccgcgga ttgggtgttg agccagcttt
    34981 gggactcgcc gacaaatcgc cggttaaacg ccaggctctc gttggcatga aatcgctcat
    35041 gcgcgatgca taggtcttct gcccagtacc gctctcgcag cggacgccca tccgaatccg
    35101 gagtgaggtc gttgaccacg ctttggtaat tctcctgcgt aatgtcggag tctgtttccg
    35161 aggaaatatc gatagcgccg ccgcttatta actgaaaagt aatcgggttc tccacggtgg
    35221 ctgtgacgtt gaatcgggag cctgcgtggg tcacattgat tcctgacaag gtcagatcgt
    35281 atgcccttgt tatcccaaaa gggtctggcg gcggggggcc gcccctggag atggttccgt
    35341 gataactcaa ggtgctgttg attgaatctt gaaaccctat gcctgttgcg agcacgatat
    35401 caggaagcct gaccgtctca ccggggcggg gttcctgcgc cgggcccgga agaattacgg
    35461 ttctgctgcg cattgcctca aagctaacct cctgtggctg tgccccgccg cgcctggcgt
    35521 catagtagga ctgcctgatc ccggaagcgc tagctggttt catgatattt gccggcaggt
    35581 tgcgcccagc cgattcgttc acttcgcggc gaatggaagc gctgaagtat tgccgatgat
    35641 gctcgaccat cttcctgcta taggaacttc gcggcgcggg ccatcgagtg cttcccgccg
    35701 tatttctgat gacgccgctg gcgccccgcg acggttcaga aactccgctt tccggcacgt
    35761 gccagcggtt gaattggttg cggctgtccc ggcaggaatc gcattctgcg ccgccgaatg
    35821 tatgctgccc gcaagcgcat tggcgctgca ataaagcaga agaatttgaa atcgcggccg
    35881 gagttgctgt ggcctgggtt gttgcaaccg ctttcattcg aaaaagatca ccttgcggcg
    35941 ccgctgggct ggcgctctgg aatctgctgg tcaatgcgat actggccgtt ccgattttcc
    36001 gggagctgtg aacgcaggaa ctggcattgc tgcatgaagg tgaagttcgg gtctccacct
    36061 tccgtgaagt gtggctgccc ttgaggcgtt gcccggtctc gccagaacga ttctccgcag
    36121 taagggtcgc gaatccgata gccgcgcgac gggagcccgt gttcctggcg tatcaggttc
    36181 tcccgctgga tggcgaattc gtctccgtgc ggcgcagttg tgttcggatt gagttggtcg
    36241 ctgttgccta ccgacagttg ccctgtgttc ggatctcgga ctgcgcctgc gcctcccgac
    36301 gtttcttccg gaagtttctt ttcctgcagc catgcatgcc cgcagagttc atgcgagagc
    36361 aacagccatg tgggggcatt ttccagtgtc ccgcccatgg tggccacccc ccatgtctgt
    36421 ggtgaatttg gtgaggtgac acggacacgc ccgcccggaa ggctgcgtat gtgtagcggg
    36481 tcgcgcggat cgttttcatg catcgtgcgc gggtgatctg tgtcgttgat ctcgatcgtc
    36541 cacggattcg agctgtttac gatggtgcac aggcatttcg cacctgttgg agtggacgaa
    36601 gcgcctgcgg cagagatgga ttcattgcca aacagtccgg cgagaccgcc gaccagcccg
    36661 ccaatgagcc cgcccaccgc gccaacaatt ggccccagga gcggcacatg tccgccgaag
    36721 ctgccgatca tgttgccgat gcgataccca gaacgcgccc cctgaaccaa tccgcccaca
    36781 aagccaggac agtaggctgt ggccagggtg acctctcccg tgctggtgtt gacggttgcc
    36841 tcgctgccgt cagccatggt gcgcaatgcg tcctgtgcca cttgcgcgtt agtctggttc
    36901 actccgttac cactcggatt cggaatacgg tcagccggcc ggtccacgcg aagttttcgc
    36961 atcagggagc cgtttccggc gggcgagagc acctccggcc gtccgggatg catgattttt
    37021 tccgcggttt tgtcggcttc agattctgaa gcgtcatgcg gaccggcaat catttccggc
    37081 gccctggctg cgcttccgcc ctgctgcacc acatgcgcca gctcatgcgc cagcagcttc
    37141 cggccggagt ggccgtgtgg cgcaaactgt ccttggtcaa aaacaatgtt gttccccgct
    37201 gtataggcca ctgcgttcac agcgcgagcg gaggcagccg cgcttgcatc tgtgtgcacg
    37261 cgaaccccgc tgaaatcctg gccaaagcgc gattcaaaaa aagtgcggct gctgcggtcc
    37321 agcggagcgc cgggcgagcc cagcacctga tgcacaatcg gtgggatggc cttggataac
    37381 cgtggtccgg cagctttggt ttgcagcttg ttctttttgc agtcctcgca ttcatcgccg
    37441 gaagccgact gcccgccgca ggcgcatttg cggaagagta agccggagtt cacggcgatg
    37501 gccggatgca caagcgcctt cgggttttga acttgcctgg tcatgagaaa aaacggttaa
    37561 cctgtttcag aatcgggtcg aatatctcaa cgatgaggtg cgctgccaaa gtaggcaccc
    37621 agtccaattg cgccaccgac caggagcgct ccaccaatcg caatcagcgc gattgcccag
    37681 ccaggcaagc cgccaccgga agttttccat tcgcacccgg tgatggcgcg catggccgcg
    37741 agaaaaggag cctggtcctc gcgactgaat tcctgaccgc gtcccatgat gttctggcgt
    37801 tccgagctgc cgatagcgcc gtaacactcg tctcggttgg aatcgccggg cgttcctggt
    37861 ggacaactta cgtgcgggcg tcccagcatg tgtccgacct cgtggggagc attgcccgcc
    37921 agccagctgt atcgatcgtt gtcgaaccct tgcggcgcgg gggtgccctg cggcaacacg
    37981 tcttccgaat agagcgtggc cctgctttcc gaagcgcggc tgtcatgctg tcccgccatg
    38041 ggacggtatt cgtaaacgtc gagggtgaca tgcggcatgt taggcgtcgg atcaccaagt
    38101 tgacgtcgct cctgcccttg tgcgttggtc atggtgtcca cgtcaataac ctgcagatga
    38161 ccgttggcgc gggtgcaggg ctcgccgggg cagggatttg ccggctccat gggccaacgc
    38221 gtgtgccaca tcgactgcac gctgttcatg aaggcgcgct tccacgcatt cgcgcggtcc
    38281 tgcggccagg gacctcctgg tgtcgtcata cggcccattg gccccatgcg ataaggcgat
    38341 ggcccaagat gaaattcgaa cttcaacttg agctgaagtt ccagctcgca ggctggatgt
    38401 tcgctgccgc gttgcggcgt ggcgttgaga ggcgaacggt ccaggtgggc gtcgccgtgg
    38461 ccactaaagt aggtgctcat ccggccaagc tcaatcccga aagcccactc ccgcagcccg
    38521 gaagaggttg ttgccggagt ggtggcagcc ggggcaggcg aagcacccgc cg
//
LOCUS       DASQYP010000319         9591 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_189740, whole genome shotgun sequence.
ACCESSION   DASQYP010000319 DASQYP010000000
VERSION     DASQYP010000319.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 9591)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9591)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9591
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_189740"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            32..3292
                     /locus_tag="VE783_10360"
     CDS             32..3292
                     /locus_tag="VE783_10360"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53841.1"
                     /translation="MEYIFLFLVGWVVVCLPALFYASVVDGRRRRDADEFTQRILSLS
                     RQVDALERRLASASQAASVAGESARTTPQHSPAPMVVATIAPPSPPPVVSPVRLEPAI
                     KPGVEPVALTPAATPAPAQTSVPPVLPTLEKRVMPQVGREPVAPEPTVKPPVPPIAPA
                     PVKPSVTTPPAASAPPRETQPAPADAAARVQAPPPPAATAPPRPAAPATVPPPSFAQI
                     SRPIPSFKSPELKKRSFSIEEALGANWGPRVGIAFVVIGVALFVGSQWSHFAPWLRLL
                     IVYASGFGAGFGFVAGGIFLDKKEQYRILGRCLIGGGWAVNTLMTYVLSHGPFAVLSS
                     QRVDLVLLLAVIGAMVWHTLRYDSQLVTGAGFLLGFTAIALNPDPPFNLIAGALLIAG
                     MTVIVLRRRWYELEVFGILAAYLNHFYWLNASVFTQRSPGQPFPEYTSSVALLVTYWA
                     VFRVSYLLRKISGPDQERVSTVAGLLNPVMLMALLKFQSFHPEWTFAALLAMGAVEFT
                     LGQLPIARRRVQPFYVLSSFGALLMLSAFPIRYSGDKLELIWLTGAEAFLIAGILTRE
                     RLFRGFGLTISSLVALYAIPVRILPLVDRISAGQPHRDLQLGLVLGILAVVLYLNAHV
                     AGRVWRQFFVRSPETETLTALSFAAALLAVSAVFSAFNDNLVAMVLALLLICLSWLGR
                     RFSISALIFESHAIAAVAFVQVMVAGLAANGSWYGVPQRVVMFSAVAVSLYLSSRMVR
                     SSQARDSLAFSAGYAAAGSTLLAVLIWQQAPAWSVIMLWVLLGVVLVAAAELFKRNDF
                     KWQALALVIAASVRAFIVNFELTATTHHVSYRSISVAVAAAGIYLLGRWSPMKALRPV
                     YSLAGTVLLSWLAYLESPQPWAPVAWIGLALMLAVAARLWEDKALLWQTHSLAVLAAG
                     WTFAYSFAPEYRATRAQLITVGITTSVLYALTWITNIAAIIDDERICQFYSWAGSLLV
                     SWLMWYQLDPAFVSLAWCALGFILFEAPDNKWFGLVSKTSMRAQAYVALVSSFAHIFY
                     ANFNTPASGTLMQILSDVRVLTILPLPPVFYWVYWRLNSEEQRGKETSAAAKAASV"
     gene            3289..3987
                     /locus_tag="VE783_10365"
     CDS             3289..3987
                     /locus_tag="VE783_10365"
                     /inference="COORDINATES: protein motif:HMM:NF021606.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2339 domain-containing protein"
                     /protein_id="HYX53842.1"
                     /translation="MKLTTKIIGYGLACLGTATIASLVRFEAAPEYVSAGYSAIVLAL
                     LATSWRTRHEIFTYQALAMLGVTAFRISLYNFYSMDKPAGSAWTSSLWAIGLLAAAVP
                     FGFLLRKSASTPASDQWFLKLSEHMEQPLFFVPVVLMAILLLLKTPDLVTLAWGAEGV
                     LVFLLALVARERSFRLTGLSLIMLCVGKVVVWDVWHYADARARYLTLIGIGLILLVIS
                     FLYGRYREAFRELL"
     gene            3984..4859
                     /locus_tag="VE783_10370"
     CDS             3984..4859
                     /locus_tag="VE783_10370"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: protein motif:HMM:NF013594.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M48 family metalloprotease"
                     /protein_id="HYX53843.1"
                     /translation="MKRFIAFVLLVTACGAIFYFGRRQKPDTRVGAQGILNAVADTQR
                     EISRIPAQITRLSDEEEIRIGDSMAANYLSHWHVANTSDAEMQDYVRKVGSAVSGRAR
                     RHLPYKFHYVADSGFVNAFALPGGHVFIGQGLIKLMKSEDELASVLGHEVEHVDNYHC
                     AERVQVEARLRHLPLGELVALPMELFQAGYSKEQELEADRDGTTLAVMAGYSAEGAIH
                     LFQTFAKLHKTYLLKAGSPDEELSKVAIQGLTDYFRSHPLPEEREAQIKNMVRRARWP
                     ERAERPLKVTTPVHA"
     gene            complement(4906..6915)
                     /locus_tag="VE783_10375"
     CDS             complement(4906..6915)
                     /locus_tag="VE783_10375"
                     /inference="COORDINATES: protein motif:HMM:NF014081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HYX53844.1"
                     /translation="MKSFAFVLLLSTPYLPAQTAQPPAANTTRYVVILSGNKAGFQTT
                     TANPDGTLQVHYEFNDRGRGPNADETITLNQNGVPVRLIAKGVDYMKAAVEETFSIEN
                     GTAQWKNRAESGEKQVSAGEFYSSVSGTPEDFHLAALAALKSPDHKLRLIPEGTFTIE
                     KKTDLKLDVAGQNHTATLYWISGLGFTPSPVWLIDDGELMAFVSSWQSQVPEGFESAI
                     PAMTAAQDKFSDQRAGDLAHTLGRRPGKPLAFVHARLFDSETAQSLPNRTVLIMGNKI
                     TAVGPDGKVMLPKDAEVIDASGKTLMPGLWDMHVHVSPDDGLLHIAAGVTSVRDLAND
                     TEFLMKTRDRYDRGEEIGPRVVMAGFIDGRGPYQGPTKVFADSVEEAQKDVDNYAKLG
                     YVQIKVYSSLKPELVPEIAKMAHSRGMRLSGHVPAGMNAEQFVKAGADEIQHMNFILL
                     NFMPQVKDTRTPARFTEVAAHAADLDLNSPPVKSFIQLLKEHKTVVDPTLSIFESMLT
                     SRPGVIPAGWADVAERMPADVRRGYLYGGIAVPEGMDQKYRDSFRQMERMTKALYDAG
                     IPIVAGTDSLAGFSLHRELEIYNEAGIPAPKVLQLATLGAAHIMKRDSQLGSIAPGKL
                     ADVILVPGDPATHISDIKRVQTVVEDGVVYQVADLDRAIGVKPAN"
     gene            complement(7324..8634)
                     /locus_tag="VE783_10380"
     CDS             complement(7324..8634)
                     /locus_tag="VE783_10380"
                     /inference="COORDINATES: protein motif:HMM:NF013056.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015205 - nucleobase transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NCS2 family permease"
                     /protein_id="HYX53845.1"
                     /translation="MNVLNRFFKFEQYNTTFARELVAGLTTFTTMSYIVVVNPAILSQ
                     AGIPAGPSFVATIAAAVFGCLLMGFYANRPFAIAPYMGENAFIAFTVCIQLGFKWQTA
                     LGAIFIAGIVFVVLTLLRLRQWIVDAVPLSLRYSFAVGIGLFLTFIGLNQTGIVALGV
                     AGAPVRSGQLTSAPVLVAIFGFLLLSVLVIRKVPGAILIGIVVTAIVAFVAHTAAPPT
                     HVLSLPPALKPISMQMDVRSALSWRAFPVVLTIFIMAFVDTMGTLIGLSARAGFLDRE
                     GKLPQIERPMMVDAFTTTLAPIIGTTTAGAYVESATGIEAGGRTGLTSIVTAICFALT
                     LFFAPFVSSIPAQAYGPAMIIVGLFMLEPITRINFGDYTDSIPSFAVITLMCFTFNIG
                     VGITAGFVLYPLGKVVTGKIREIKPGLWILTALSLLFFIFYPYG"
     gene            complement(8631..9449)
                     /locus_tag="VE783_10385"
     CDS             complement(8631..9449)
                     /locus_tag="VE783_10385"
                     /inference="COORDINATES: protein motif:HMM:NF016289.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M28 family peptidase"
                     /protein_id="HYX53846.1"
                     /translation="MRALLASLLLIVSCAICVAEKLVFTLAEKTEIVGNAEINPETDQ
                     QRAARLHLLFSDAGCRGNLLSEQPVESNSVPNIVCRLPGNREGTIIVGAHYEHPTSEL
                     RPLDNWTGAALLPGLYHCLRGHRRRRTVLFVAFADHGNDPAGAEFFASHFAAQDLKGV
                     EAMVNLDVLGLSPTKIWTAHSDKELVTDLVHMVYVLKIPASQIDIQAAGSTDSQPFAQ
                     RGIPQITVHSLTRQNLENRRASQFRPGNYYDSYHLLCGYLAYLDQALKPRPRSG"
BASE COUNT         1875 a         2697 c         2903 g         2116 t
ORIGIN      
        1 atgcagcaca acttaacgcc acttggtctg aatggaatac atattccttt ttctcgtcgg
       61 ctgggttgtg gtttgtcttc cagccctgtt ctatgccagc gtcgttgacg gccgtcgccg
      121 tcgcgatgcc gatgaattca ctcagagaat cctctcgctc tcgcgccaag ttgacgcgct
      181 ggagcgccgg ctggcgagcg ccagccaggc agcgtccgtt gccggcgaaa gcgcgaggac
      241 gacaccgcag cactcgccgg ctccgatggt tgtggcgaca attgcgccac cttctccgcc
      301 gccggtggta tcaccggtaa ggctggagcc ggcgatcaag cctggtgttg agccagttgc
      361 gctcacgcct gcggcaacgc cagctcctgc gcaaacaagc gtacctccgg ttttgccaac
      421 gcttgaaaag cgtgttatgc cgcaggtggg aagagaaccg gtggctccag aaccaacggt
      481 taagccgcct gtgcctccga ttgcgccagc accggtgaag ccgtctgtta ccacgccgcc
      541 agccgcttcc gctccaccgc gtgaaacgca gccagctccc gcggatgccg cggcccgagt
      601 acaggcaccc ccaccgccag ccgcgactgc tccgcccagg cctgccgcac ccgcgacagt
      661 tccgccgcca agctttgctc agatctctcg tccgattccg tcgttcaagt cacctgagct
      721 gaagaaaagg tcattttcca ttgaagaagc gctgggcgcg aactggggac cacgggttgg
      781 catagctttt gtagtgattg gcgtggccct gtttgtcggg tcgcaatgga gccatttcgc
      841 gccctggctg cggctgctga tcgtgtatgc gtcaggcttc ggagccggat tcggcttcgt
      901 ggcgggcggc atttttctcg acaagaagga gcagtatcga atcctggggc gctgcctgat
      961 cggcggaggc tgggcggtga acacgctgat gacctatgtt ctcagccacg ggccattcgc
     1021 ggtgctgagc tctcagcgtg ttgatctggt cctgctgctt gcggtgatcg gcgccatggt
     1081 ctggcatacc ctgcgctacg attcgcagct ggtgaccggc gcggggtttc tcctgggctt
     1141 taccgctatc gctctcaatc ctgatcctcc gttcaatctc attgccggcg cgctgttgat
     1201 cgcaggaatg acggtgattg tgctacgccg gcggtggtat gagctggaag tgttcggtat
     1261 tctcgcggct tatctcaatc acttttactg gttgaacgct tcagtgttca cgcagcgtag
     1321 cccggggcag ccttttcctg aatacacgag cagcgtggct ctgttggtca cgtactgggc
     1381 ggtctttcgt gtttcgtacc ttctgcgcaa gatcagcggt cccgaccagg agcgggtctc
     1441 tacagtggca ggcctgctca acccagtcat gctgatggcg ttgctgaagt tccagtcatt
     1501 ccatccggaa tggacgtttg cagcgctgct ggcaatgggg gcagtcgagt tcacactggg
     1561 ccagctcccg atagcgcgcc ggcgcgttca gcctttctat gttctttcca gctttggcgc
     1621 gctcctgatg ctgtcagctt tccccattcg ctattcgggc gacaagctgg aactaatctg
     1681 gctgaccggc gcagaagcat ttctcatcgc cggcattctc acgcgcgagc ggcttttccg
     1741 cggctttggg ttgaccatat cttctctggt tgctctttac gccatccctg ttcgcatctt
     1801 gccgctggta gatcgcattt cggccggcca gccgcaccgc gaccttcagc tcgggctggt
     1861 gctgggcatt cttgccgtcg ttctttacct caatgcgcac gtggctggcc gggtatggag
     1921 gcagttcttt gtacgctcgc cggaaaccga gaccctgact gctctttctt ttgctgcagc
     1981 gttgctggct gtgagcgccg tgttctccgc gttcaacgac aatctggtgg caatggtcct
     2041 ggcgttgctg ctcatctgcc tcagctggct tggtcggcgc ttctcgattt ctgcgctgat
     2101 cttcgagtca catgctattg cggcagtggc attcgtgcag gtcatggttg ccggtctggc
     2161 cgctaatgga agctggtatg gcgttccgca acgtgtggtc atgtttagcg cagtcgcggt
     2221 ttcgctatat ctcagctcgc gaatggtgcg ctcttcgcag gcccgcgaca gccttgcatt
     2281 ttcggcaggc tatgcagctg ctggcagcac actgctggcg gtgttgatct ggcaacaggc
     2341 gcccgcgtgg tcagtgatca tgctctgggt gctgctgggt gtggtactgg ttgcggcggc
     2401 tgaactgttc aaacgcaatg atttcaagtg gcaggcactg gcgctggtca tcgccgcatc
     2461 ggtgcgggcg ttcatcgtca attttgaact cacggccacc acgcaccacg tgagctatcg
     2521 ttcgatctcc gtggccgttg cggcggccgg catttatctg cttgggcgct ggtcgccgat
     2581 gaaagctttg cggccggtgt attcgcttgc aggcaccgta ttgctcagct ggttggccta
     2641 cctggaatcg ccgcaaccct gggcgccggt tgcgtggatt gggcttgctc tcatgctcgc
     2701 agtcgcggcc cggctgtggg aagacaaagc cttgctctgg cagacgcatt ccctggccgt
     2761 gctggccgca ggatggacgt ttgcctacag ctttgctccg gagtatcgcg ccacccgcgc
     2821 gcagcttatt acggttggga ttaccacttc ggtgctctac gcactcacat ggatcacgaa
     2881 catcgccgcg atcatcgacg acgagcgcat ctgccagttc tattcctggg cgggttcgtt
     2941 gctggtgagc tggctgatgt ggtatcaact ggacccggcg tttgtctcat tggcgtggtg
     3001 cgcgctcgga ttcatcctgt tcgaggctcc ggacaacaaa tggttcggct tagtttcgaa
     3061 gacgagcatg cgggcgcagg cttacgtggc gcttgtctcg agctttgccc acatcttcta
     3121 tgcaaatttc aacacacccg caagcgggac tctgatgcag attttgagtg acgtccgtgt
     3181 actcaccatc cttccgctgc ctccggtgtt ctactgggtt tactggcggc tcaattccga
     3241 agaacagcga ggcaaggaaa cgagcgccgc agcaaaggcg gcatcggtat gaaattgaca
     3301 accaaaatca tcggttacgg gctggcgtgc ctgggcacgg cgacaatcgc ctctctggtc
     3361 cggtttgagg ctgcgccgga atatgtgtct gccgggtatt ccgcaattgt cctggctttg
     3421 ctcgcaacgt cctggcgcac gcgccatgaa atcttcacct atcaggcgtt ggccatgctc
     3481 ggggtcacgg cattcaggat cagcctctac aacttctatt ccatggataa acccgctggt
     3541 tccgcgtgga caagttcgct gtgggcgatc ggactgcttg cggcggcggt gcctttcggt
     3601 ttcctcttgc ggaaaagcgc cagcacaccc gcgagcgacc agtggttcct gaagctttca
     3661 gagcacatgg aacagcctct cttctttgtg cccgtggtgc tcatggcgat tctccttctg
     3721 ctgaagaccc ctgatttggt gacgctggcg tggggcgccg aaggcgtgct ggtatttctg
     3781 ctggcgctgg tggccaggga gcgcagcttc cggctcaccg gattgagctt gattatgctg
     3841 tgcgtgggaa aggtagtggt ctgggatgtg tggcactatg ctgacgcccg ggcgcgctac
     3901 ctgacattga tcggcatcgg tttgattctt ctggtgattt cgtttcttta tggccgctac
     3961 cgcgaggcgt tccgcgagct gttatgaagc gattcattgc tttcgttctg ttggtgacag
     4021 cttgcggcgc gatcttttat ttcggccggc gacagaagcc tgatacgcgc gtcggtgcgc
     4081 agggcattct taatgcggtc gctgacaccc agcgcgaaat cagccgaatc ccggcccaga
     4141 tcacgcgcct ctccgatgaa gaagaaatcc gtatcggcga cagcatggct gcgaattatc
     4201 tttcccattg gcatgtggcg aatacttctg acgcagagat gcaagattat gtgcgtaagg
     4261 tagggagcgc cgtctccggc cgcgcgcgtc gtcacctgcc ttacaaattc cattacgtcg
     4321 ccgattccgg attcgtgaat gcgttcgcgc ttccgggtgg tcatgtgttc atcggacagg
     4381 gattgatcaa gctgatgaag tcagaagacg agctggccag cgtgctggga cacgaagttg
     4441 agcacgtgga caattatcac tgcgcggaac gagtgcaggt tgaggcgcga ctgcggcatc
     4501 tgccactggg tgaactcgtg gcgttgccaa tggaactctt ccaggccggc tacagcaaag
     4561 agcaggaact ggaggccgac cgcgatggca ccacactggc ggtcatggcc ggctactcgg
     4621 ctgagggcgc tattcacctg tttcagacat ttgcaaagct gcataagacg tacctgctta
     4681 aggcgggcag cccggatgag gaattgtcca aagtggccat tcagggatta acggactatt
     4741 tccgctcgca tccgcttccc gaagagcggg aggcacagat caagaatatg gtacgtcgcg
     4801 cccgctggcc ggaacgcgcg gagcgtcctc tgaaggtaac gacgcccgtt cacgcctgac
     4861 tgcggaccgc ctgcttcgga tataccaatg atctgacgcc gccactcagt tggccggctt
     4921 caccccaatg gcgcggtcaa ggtcggcgac ctgatataca acgccatctt ccacgacagt
     4981 ctgcacgcgc ttgatgtcac tgatgtgcgt ggccgggtca cccggaacaa gaattacatc
     5041 cgccagtttg ccgggtgcga tgctgccgag ctgagagtca cgtttcatga tgtgagcggc
     5101 gccaagcgtg gccagctgaa gtactttcgg agcaggaata cctgcttcgt tatagatctc
     5161 cagttcgcga tggagagaaa atccggcaag gctgtcagtc cctgccacaa tggggattcc
     5221 ggcgtcataa agagctttgg tcatgcgctc catctggcgg aacgaatcac ggtatttctg
     5281 gtccatgcct tctggcacgg cgattccgcc ataaaggtag cccctgcgca cgtcggcggg
     5341 catgcgctcc gcaacgtccg cccatccggc gggaatcacg ccaggacggc tggtcaacat
     5401 gctttcgaaa atgctgagcg tcggatcgac caccgtcttg tgttccttga gcaactgaat
     5461 gaacgacttc actggcggtg aattgagatc gagatcggcg gcgtgggcag ccacttcagt
     5521 gaaccgagcc ggagtgcgcg tgtcttttac ctggggcatg aagttcaaca ggatgaagtt
     5581 catgtgctga atttcatcgg cgccggcttt tacgaactgt tccgcattca tgcctgccgg
     5641 cacgtgacca ctcaggcgca tgccgcggct gtgcgccatc tttgcaatct ccgggaccag
     5701 ctccggtttt agcgagctat aaactttgat ctgcacatag ccgagcttgg catagttgtc
     5761 cacgtccttc tgcgcttctt ccacgctgtc tgcgaatacc ttggtagggc cctgataggg
     5821 gccgcgaccg tcaataaagc cggccatcac cacgcgcggc ccgatttcct cgccgcgatc
     5881 atagcgatcg cgcgttttca tgaggaactc ggtgtcattc gcaagatcac gcacggaggt
     5941 cactccggcg gcgatgtgga gaaggccatc atcaggcgaa acatgcacat gcatgtccca
     6001 gaggccgggc atcagagtct taccggacgc gtcaatcact tcggcgtctt tgggcagcat
     6061 gacttttcca tccggcccga cggcagtgat tttgtttccc atgatcagga ccgtacggtt
     6121 ggggagcgac tgcgcggttt cggaatcaaa gagccgggcg tgcacaaagg ccaacggctt
     6181 gcctggacgc cgccccaaag tatgcgcaag atcgcccgca cgctgatcgg aaaacttgtc
     6241 ctgagcggcg gtcatggccg gaatcgcgga ctcaaatccc tccggaacct gcgactgcca
     6301 ggaagagacg aacgccataa gttccccgtc atcgatcagc cagactggcg atggcgtgaa
     6361 gcccagcccg gaaatccagt acaaagttgc ggtgtggttc tggccggcaa cgtcaagctt
     6421 caggtcggtc ttcttctcaa tggtgaatgt gccttccgga atcaggcgaa gcttgtggtc
     6481 gggggatttc agcgcggcga gcgcagccag gtggaaatct tcgggagttc ccgaaacact
     6541 ggaatagaat tcgcctgcgg atacctgctt ctcgccggat tcggcgcggt tcttccactg
     6601 tgccgtgccg ttttcgatac tgaaggtttc ttccaccgcg gccttcatgt aatccacgcc
     6661 ttttgcaatc agccggacgg gaacgccatt ctggttgagc gtgatggttt catctgcgtt
     6721 gggaccgcgg ccacgatcgt tgaactcgta atgcacctgc agcgtgccgt caggatttgc
     6781 ggtggtggtc tgaaatccgg ccttgttgcc ggagaggatg accacgtagc gcgtggtgtt
     6841 tgcggcggga ggctgcgctg tttgtgccgg cagatacgga gtagagagca ggagtacgaa
     6901 ggcaaaagac ttcatgagtt cctcagcatg acagtttcta tttagacgat gggtgggacg
     6961 aagtgcaacc tgaattctag agcctgtccc ataaatgact caatcgggta acacgctttg
     7021 tagcacaggc gcctcgcctg tgccggtgac agtccacgga gccacggatc tttgatcttc
     7081 tgcttccctt tgcttcgcct cattcagggg cagcccattt cttgtatgaa acttgatgaa
     7141 gaacgaaccg ccgtctcttt caaggtgcgg caatttgcct cgtagatcat cattcttgcg
     7201 gcacaggcga ggcgcctgtg ccgcacagtt aacaagaggc acttcaacac gcaagagaga
     7261 agtcggccgg gcaatcactg gtcgacccca gcctagctaa ctcagatatg aggtggctcc
     7321 agatcagccg taaggataaa agataaaaaa gagcagcgaa agcgcggtca ggatccaaag
     7381 tccgggtttg atctcgcgaa ttttgccggt tacgacctta ccgagcgggt acagaacgaa
     7441 tcccgcggtg attcccacgc cgatattgaa ggtaaaacac atcagcgtga tcacggcgaa
     7501 tgagggaatg gaatccgtgt agtcgccgaa attgatgcgt gtgatcggct cgagcatgaa
     7561 gaggcccacg atgatcatgg ctggaccata agcctgcgcg ggaatagaac tgacgaacgg
     7621 cgcaaagaac aaggtgagcg caaagcagat ggcagtcacg atggaggtaa gtccggtgcg
     7681 gccgcctgct tcaatgccgg tagcggattc aacgtaagcg ccggctgtgg tggtgccgat
     7741 gatcggcgcc agcgtggtgg tgaatgcgtc aaccatcatg gggcgctcga tctgcggtag
     7801 cttgccttcg cggtccagga atccagcacg cgcggaaagc ccaatcagcg tgcccatggt
     7861 gtccacaaac gccataatga agatggtgag caccaccggg aaggcgcgcc agctcaatgc
     7921 ggagcggacg tccatctgca tggagatagg cttcagggcg ggcggaaggc tgagcacgtg
     7981 cgtgggcggc gcagccgtgt gcgcgacgaa agccacaatc gcggtgacca caatgccgat
     8041 gagaatcgcg cccggaactt tgcggatgac cagcacggaa agcagcagaa agccgaagat
     8101 ggctaccagc acgggggctg aggtgagctg cccggagcga accggcgcgc cggcgactcc
     8161 gagcgcaaca atgccagtct ggttcaggcc gataaaggta aggaacaatc cgatgccgac
     8221 ggcgaagctg tagcgcagcg agagaggcac ggcatcaaca atccactggc gaagacgaag
     8281 cagggtgagc accacaaaaa caatcccggc aatgaagatt gcgccgagtg ccgtctgcca
     8341 tttgaacccc aattgaatgc acacggtaaa cgcgataaat gcgttctctc ccatgtaagg
     8401 agcgatggca aacggccggt tggcataaaa acccatgagc agacagccaa acacggcggc
     8461 cgcgatggtg gccacaaaac tggggcctgc cgggatcccg gcctgggaca gaatggccgg
     8521 gttcaccacc acaatgtaag acatggtggt gaaagtggta agcccggcaa ccaattcgcg
     8581 cgcaaaagtt gtgttgtatt gttcgaattt gaaaaagcgg ttgagtacgt tcatccggaa
     8641 cgcggcctcg gcttaagagc ctgatcaaga taggccagat agccgcagag caggtggtaa
     8701 ctgtcatagt agttgccggg acgaaactgc gacgcgcgcc gattctcaag gttctgccgc
     8761 gtcagggagt gcacggtaat ctgcgggatg ccgcgctggg caaacggttg cgaatcagtg
     8821 ctgccggcag cctgaatatc gatttggctg gccggaattt tgagcacgta aaccatgtgc
     8881 accaggtcgg tgaccaactc tttatcagag tgtgcggtcc agatttttgt aggcgagagg
     8941 ccgagcacgt cgagattgac cattgcctcc acccctttaa ggtcttgcgc cgcgaagtgg
     9001 ctggcaaaga attccgctcc ggcgggatcg ttcccgtgat cggcgaatgc cacaaagagc
     9061 accgtgcggc gccgtcgatg gcctctcagg cagtgatata agccaggtag cagcgctgcg
     9121 ccggtccagt tgtccagggg gcgcagctcg gaagtggggt gttcatagtg cgcgcccaca
     9181 atgatggttc cttcgcgatt gccgggtaaa cggcaaacga tgtttgggac tgagttgctc
     9241 tccaccggct gctcagaaag caagttgcct ctgcagcccg catcagagaa aagcaaatgc
     9301 aggcgggcgg cacgctgctg gtcagtttcc ggattaatct cagcattgcc aacgatctcg
     9361 gtcttctccg ccagcgtgaa gacaagcttt tccgctacgc agatggcaca gctcacaatc
     9421 agcaggagac tggcaagtag agcccgcata atgttgctgg atatcttaca cgcgctccag
     9481 cgccagcttg ccctggcttt gggtgatata gccccaaggg gtttcaggat cgtgggtaaa
     9541 catggtgagc cagcgctccg ggacggcgcg cgagtaatac ttcttgcgat t
//
LOCUS       DASQYP010000320         8828 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_246345, whole genome shotgun sequence.
ACCESSION   DASQYP010000320 DASQYP010000000
VERSION     DASQYP010000320.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 8828)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8828)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8828
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_246345"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(60..1763)
                     /locus_tag="VE783_10390"
     CDS             complement(60..1763)
                     /locus_tag="VE783_10390"
                     /inference="COORDINATES: protein motif:HMM:NF019352.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multicopper oxidase"
                     /protein_id="HYX53847.1"
                     /translation="MPAKKPFLSLTRREFLERGCVFAGSLWLPQNLLAEEQIATSTPL
                     PRPAGNDGTRKHVTPGKQPPKLDAGKLEKFVDVLPVPALARAVGTRPDPANRRARVPL
                     YRISMRQMEAKLHRDIPLTRVWGMNGSVPGPTFDVRSGEAIAIEWANDLPRTHLLEID
                     HAIHGAGEHQPDVRAVIHVHGGRTPAKSDGYPEDWYISGKSAVFHYPNQQDAAMLWYH
                     DHTLGINRLNLFAGLAGCYFVRDKTEESLPLPRGKYEVPLMIFDREFTRNGQFSYPAK
                     WVNEFGGDAAMVNGKVFPYFEVEPRLYRLRVVNAANSRIFDLSFADIEASGAAHPHEL
                     KFHQIGSDQGLLPAPVDVQHVSLAPGERADLIMDFAPHAGRKITLLNDDDELPQIMQF
                     RIGRKAATADASRLPASLRAVERMQESSAVKTRTMMLSDVIVNSDVPVAMLLNKAKWS
                     APITENPALNSVEIWELANVTDENHPIHLHMVRFQILDRRPFDVLQFQESGKISYGGP
                     AIPPPATEAGWKDTVQATHGFVTRIIAKFGPYPGRYVWHCHVLEHEDNEMMRPFEVIG
                     A"
     gene            2003..3298
                     /locus_tag="VE783_10395"
     CDS             2003..3298
                     /locus_tag="VE783_10395"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53848.1"
                     /translation="MSKKSVISLSLFFALAVSMNGFAQSLSQAALAQVGPGADGADAI
                     HDIAPQTIHTVPTELVADTDLGNNANAIAGNPGGVANVISVPNFTRSFTVNGVTFPYT
                     MVGNDPSLGHITTVPTKIVAVSLQLLNADGTVFDTVSAAPFVVPTLNSPDFQRFKYEH
                     DATAGIPAEPTQFSDAVQRAEFAASMDPNWHTELAPQVVDSITITVPKFVNVRVGTQV
                     VQAINYVSGIAADGQRFVLMLNLFFNQQLGVIMNNEIDAGNATTDAINLPLFPNTYLF
                     SFNRANPLVRGSCCTLGFHTYFTDGASPEHRWITDYASYISRGIFGGGFNDVTAISHE
                     IAETFNDPFVNNATPRWQFPGEPGVCQGNLETGDPVEVLAHATFPVTLSVSGQNVTYH
                     PQTEALLQWFAQTVPSNALHGAYSYPDLTALTAPATLCH"
     gene            complement(3364..4806)
                     /locus_tag="VE783_10400"
     CDS             complement(3364..4806)
                     /locus_tag="VE783_10400"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4118 domain-containing protein"
                     /protein_id="HYX53849.1"
                     /translation="MSPRIGFRIIVCAAVLALIVFLYGKWLHVNPTTVALTLLLAILA
                     VAAAWGLRYALPMSVAAALCFNFFFLPPVGNFTIADTQNWVALVAFFISSVIASNLSE
                     RARRQAEEANLRRRDVERLNRLSQQLLASDNVLDLLTSVPLYIKESFSATHAAVYVGG
                     RDQIYRSDPERQDIPPEHLRKAAGGLELVRDPARKLVIAPLRMGVRSVGSFGITGDMP
                     NTQTLQAVGVLIATAIERSRAVEELTRTEASREGERLRSALLDSVTHEFRSPLTAIKA
                     SVTTLISSPALKPEDRSELLQVIDEESDRLNRLIGEAVEMAQLDAREVKLELGSHQIS
                     EAIDAALEDCRTTLASHPVNVRLADSLPSAIMDVNWIKKVLQHLLENAAKYSPANAPI
                     FISSEVKNDRLITSVADRGAGIDDLERSMIFDKFYRGQSQRYRVQGTGMGLAIVKAIV
                     EAHNGRIDVTSQLGQGSVFSFGLPIAKAAA"
     gene            4867..5991
                     /locus_tag="VE783_10405"
     CDS             4867..5991
                     /locus_tag="VE783_10405"
                     /inference="COORDINATES: protein motif:HMM:NF014728.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sensor histidine kinase KdpD"
                     /protein_id="HYX53850.1"
                     /translation="MQKTPEQWLEQAAPEKKAGIFKVFLGYAPGVGKTYSMLSEAIRR
                     KKRGEDVLIGVVETHGRKGVAELLAHLEVVPRKVLEYRGTVFHEMDVDAILARQPQVV
                     LVDELAHTNIDGSKHKKRYEDVLEILEAKIDVLSTVNIQHLESVTPTVQSITGIRVRE
                     TVPDWVLRRADEVVLADLTPEALQTRMRRGDVYPVDRAEQALKHFFRPGNLLALRELA
                     LRHVTETVDKSLESYLERKRIDQNWGVSERVAVCISSNPASQQLIARGARMAKGLDAE
                     FFVIHVERGDEGRTEDRRLALAENIRFAHNLGAQIVQIEGAMVAATVAQFVREYKITQ
                     VIFGRSAGHGWRKYLYLMAINRFLASAPSVDVHIVTQEES"
     gene            5991..6692
                     /locus_tag="VE783_10410"
     CDS             5991..6692
                     /locus_tag="VE783_10410"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HYX53851.1"
                     /translation="MRERSRILVVDDETQISRVLKTTLSSQGYEVKTAADGEAGLEAV
                     TDWHPDLLITDLSMPKMNGVELCRAVREHSQIPIIVLSVREEEKNKVEALDAGADDYV
                     TKPFGVNELLARVRANLRRVAATAEPPNTPIAAGDFYISPESRQVKVRGQEVHLTPKE
                     FDLLTFMARHPGKVLTHRVLLNAVWGGQSVQQPEYLRVFINQLRKKIEPEDTPRYILT
                     DPWVGYRFQPGGDNQ"
     gene            complement(6713..6946)
                     /locus_tag="VE783_10415"
     CDS             complement(6713..6946)
                     /locus_tag="VE783_10415"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53852.1"
                     /translation="MLYRSIKPLVVDAVQVQERTEVKTESGVIHAEKGDWLIRDPQGN
                     LYRCDDMTFKFTYDTLADWTPVQDLAEGRPCGC"
     gene            7743..>8828
                     /locus_tag="VE783_10420"
     CDS             7743..>8828
                     /locus_tag="VE783_10420"
                     /inference="COORDINATES: protein motif:HMM:NF019268.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane beta-barrel protein"
                     /protein_id="HYX53853.1"
                     /translation="MPSGRKVALIVLLPALFISGSQINAQTAPTSDAEVQQLRELVLK
                     LQSRIEQLENKQGGVAPAPGTQTIVTAAVADAAPPSGISKEDRTALDFLKGTTFSGAL
                     DGYYGYNFNQPVGRVNLLRAYDVMSNSFSLNQANFLLEHAPAPDAGNRFGVRLDFQYG
                     QATETVQGSAANELRPQVYRPLWQAYGTYVFPAGSGVTLDFGKFASALGMEGNYNKDQ
                     INYSRSYYFNFLPFYHMGFRAGYNITPKVNLTYWLVNGAQQVEDFNGFKSQAFIVTLK
                     PRSTVTWSVNYYFGQEQRDVNAVLNPGFPTGPTQPGLPTTNIIPSPNGREHIFDSYLT
                     WNATPKLTLLGEGDYVVNRLFSNSAPQH"
BASE COUNT         1890 a         2626 c         2455 g         1857 t
ORIGIN      
        1 ttcatcgcac gtcattccac aatgcagcac tgattctgtc aacgccaaaa tcacgtgaat
       61 caggcgccaa tgacctcgaa gggacgcatc atctcattgt cctcatgctc caaaacgtgg
      121 cagtgccata cgtagcggcc cggatacggt ccaaatttcg caatgattct ggtgacaaac
      181 ccatgggtcg cctgcactgt atctttccat ccagcttccg tggcaggcgg cgggattgca
      241 ggtccaccgt agctgatctt gccgctttcc tgaaactgaa gcacgtcaaa cggacggcga
      301 tcgaggatct ggaaccgcac catatgcaga tgaatcggat gattttcgtc ggtgacgttg
      361 gccagttccc agatttcaac cgagttcagg gcaggatttt cggttatggg tgcgctccat
      421 tttgccttgt tgagcagcat ggccaccgga acgtcagagt tcacgatcac gtcgctcagc
      481 atcatggtcc gcgtcttcac ggctgatgat tcttgcatgc gctccactgc gcgcaggctg
      541 gcaggtagcc tgctggcatc cgccgttgct gccttccgcc caatccggaa ctgcatgatc
      601 tggggcaatt cgtcatcgtc attcagcagt gtgattttcc tgcctgcgtg gggtgcgaag
      661 tccatgatca ggtctgcccg ttcgcctggc gccagtgaga catgctgaac gtccacgggc
      721 gcaggcagca gtccctggtc gctcccgatc tgatggaact tcaactcatg cgggtgtgca
      781 gcgccggaag cctcgatatc ggcgaacgat agatcaaaga tccgcgagtt ggcggcattc
      841 accacgcgca atcggtaaag ccggggctca acctcgaaat atgggaagac ctttccgttt
      901 accattgccg cgtccccgcc aaactcgtta acccactttg cgggatagga aaactggccg
      961 tttcgagtaa actcgcggtc aaagatcatg agagggactt catacttacc acgcggcagc
     1021 ggcagtgatt cttccgtttt gtcccggaca aagtaacacc cggcgagtcc cgcgaacagg
     1081 ttcagccgat tgatgccaag agtgtggtcg tggtaccaga gcatcgccgc atcctgctgg
     1141 ttcggatagt ggaatactgc agatttgccg gatatgtacc agtcttccgg atagccatca
     1201 ctcttagcgg gcgttctgcc tccatggacg tgtatcacag cccgcacatc aggctggtgc
     1261 tcgcccgcgc catggatcgc gtggtcgatt tccaacaggt gcgttcgcgg cagatcgttg
     1321 gcccactcaa tcgcgatcgc ctcacccgag cgcacatcaa acgtgggacc gggaacgctg
     1381 ccattcatgc cccatacgcg agtgagcggg atatcgcggt gaagtttagc ttccatctgc
     1441 cgcattgaaa ttcggtagag gggaaccctg gcgcgacgat tggcaggatc tggccgtgtt
     1501 ccaacagcgc gcgcgagcgc gggaaccgga agcacatcaa cgaatttctc gagcttgccg
     1561 gcgtccagtt ttggcggttg ctttccaggt gtcacatgct tgcgcgtacc gtcgttcccc
     1621 gccggccgtg gtagcggtgt ggacgttgca atctgctctt cagcaaggag gttctgcggc
     1681 agccacagac tcccggcaaa cacgcagccg cgctccagaa actcgcgacg agtaagagac
     1741 aggaacggct ttttggcagg cacacgcaga tggtagacta aggggcttgc attgcaaaac
     1801 tctcgatcgt tctgattgac gggcggaacc gaactggaga ttaagtacag cccatgatgc
     1861 tggcctaagc agcctagggc aaaaaagttt gttgaacatc cagaaaacgc ctctccagcc
     1921 atttacgcca gcgaatcagg aatagtaact tatctgttaa cagttcaact ctcacgcacg
     1981 tccaggagca aaacatctcc caatgagcaa gaagtcagtt atttccctca gcctgttttt
     2041 cgctttggca gtctccatga acggctttgc gcaatcgctc agccaggccg cgctggcaca
     2101 agtcggcccc ggagctgatg gcgctgatgc gatacacgat atcgcacctc aaacgatcca
     2161 cacagtacca actgaacttg tcgctgacac tgatcttggc aacaacgcca acgcaatcgc
     2221 cggtaatccg ggcggcgtcg cgaacgtgat ctctgttccc aacttcaccc gttcattcac
     2281 cgttaacggc gtaaccttcc catacaccat ggtgggcaac gatccatccc tgggccatat
     2341 cacgaccgtt ccaactaaga tcgtggccgt gtccctgcaa ttgctgaatg ctgacggaac
     2401 agttttcgac accgtgagcg ccgccccatt tgtggtgccc acactgaatt cccccgattt
     2461 ccagcgattc aagtatgagc atgacgccac cgccggaatt cccgccgagc ccacgcagtt
     2521 ttcagacgct gttcagcgcg ctgagtttgc ggcctcaatg gatcccaact ggcacacgga
     2581 actggctccc caggttgtcg acagcatcac catcacggtg ccaaaattcg tgaatgtgcg
     2641 cgtaggcacc caggtggttc aggcgatcaa ttacgtctcc ggtatcgccg ctgatggtca
     2701 acgctttgtg ctgatgttga acttgttctt caaccagcag cttggtgtga ttatgaacaa
     2761 cgaaattgat gccggcaatg cgaccacgga cgccatcaac ctgccgttgt tccccaacac
     2821 ttacctgttc tccttcaatc gcgccaatcc gctggtgcgt ggcagctgct gcacgctggg
     2881 tttccacacc tactttacgg atggcgcctc acctgagcac cgctggatta ccgattacgc
     2941 cagctatatc tctcgtggaa tctttggcgg cggattcaat gacgtgactg ccatcagcca
     3001 tgaaattgct gaaaccttca acgatccttt cgtcaacaac gccacgcccc gctggcagtt
     3061 ccccggtgag cctggcgtct gccagggcaa tctggaaacc ggagatccgg tggaagtatt
     3121 ggcgcacgcc accttcccag tgaccttgag cgttagcggc cagaacgtga cgtatcatcc
     3181 gcaaaccgag gcgctgctgc aatggttcgc ccagaccgtg ccttccaacg cactgcatgg
     3241 agcgtacagc tatccggacc tgacggcgct gactgctccc gccacgctct gccactaaac
     3301 tcaacatcca atgaaaaagc gccggggtct ccccggcgtt ttttattttc acttgagaat
     3361 gctctaggct gccgccttcg cgatgggaag gccgaaagag aacacagagc cctggcccag
     3421 ctggctggtc acatcaatgc gtccattgtg ggcctcgaca atcgctttta ctatcgccag
     3481 ccccatcccg gtgccctgca cgcggtagcg ctggctctgc ccgcgataaa atttgtcaaa
     3541 aatcatcgag cgttccaggt cgtcaatccc ggccccgcgg tcggccacgc tggtgatcag
     3601 gcgatcattc tttacttcgc tgctgatgaa gatcggggca ttcgccggcg agtacttggc
     3661 ggcgttctcc agaagatgct gaaggacttt tttgatccag ttcacgtcca tgatggcgga
     3721 ggggagggaa tcggcaagcc tgacattcac cggatggctc gccagggtcg tgcggcagtc
     3781 ttcgagcgct gcgtcaatcg cctcgctgat ctggtgtgat ccaagctcca gtttcacctc
     3841 tcttgcgtcg agttgcgcca tctccaccgc ttctccgatc agccggttca ggcgatcgct
     3901 ttcctcatcg atgacttgaa gcagttcgct ccggtcttcc ggcttgagtg cgggactgga
     3961 gatcagcgtg gtcactgacg ctttgatcgc ggtgagcggt gagcggaact cgtgggttac
     4021 ggaatccagc agggcggaac gaagccgctc accctcgcgt gacgcctctg tccttgtgag
     4081 ctcttccact gcgcgcgagc gctcaatcgc cgtagcgatc aggactccca ccgcctgcag
     4141 cgtttgcgta ttcggcatgt cgccggtaat tccgaatgag ccgacgctgc ggactcccat
     4201 ccgcagtggt gcgatcacca gcttgcgtgc cgggtcgcgc accagttcga ggcctcccgc
     4261 agctttgcgc aagtgctccg ggggaatgtc ctggcgttca ggatcggagc gataaatctg
     4321 gtcccgtccg cccacataga ccgctgcgtg cgttgcggaa aagctttcct tgatgtaaag
     4381 cgggactgac gtcaacaagt ccagcacatt gtctgaagcc agcagctgct ggctcagcct
     4441 gttgagccgc tcgacatccc ggcggcgcag gttggcttct tccgcctggc gtcgcgcgcg
     4501 ctcggaaaga ttgctcgcga tcacggagct gataaagaag gccaccaggg ccacccagtt
     4561 ctgcgtatcg gcaatggtga aattcccaac cggcggcagg aagaagaagt tgaagcacag
     4621 cgctgcggcc accgacatgg gaagcgcata ccgcagcccc cacgccgcgg caaccgcaag
     4681 gatcgcgagc aacaatgtga gcgccaccgt ggtgggattg acgtgcagcc acttcccgta
     4741 tagaaacacg atcaaagcca gcacggccgc gcacacgatg atgcggaacc cgattcgcgg
     4801 ggacaatctc acgccgagat tgtagccgaa ccgtgctaac ctccagtgat agaagcaggg
     4861 acgccagtgc agaagacgcc tgaacaatgg ctcgagcagg ctgcgcctga gaaaaaggcc
     4921 ggcatcttca aggtctttct cggctatgcc cccggtgttg gcaaaaccta cagcatgttg
     4981 agcgaggcca tccgtcgcaa aaagcgtggc gaggatgtgc tcattggcgt cgtggaaacg
     5041 cacggccgca agggcgtggc ggaactgctc gcccacctgg aggtggttcc ccgcaaggtt
     5101 ctcgaatatc gcggcacggt ctttcatgaa atggatgtgg acgcaatcct tgcgcgccaa
     5161 cctcaggtgg tgctggtgga tgagctggcc cacaccaaca ttgacggaag caagcacaag
     5221 aagcgctacg aagacgtgct ggagatactg gaagcgaaga ttgacgtgct atccaccgtg
     5281 aatattcagc acctggaaag cgttacgccc acagtgcaga gcatcaccgg catccgcgta
     5341 cgtgaaaccg tgcctgactg ggtgctgcgc cgggcagacg aggtagtact cgccgatctc
     5401 acacctgagg cgctccagac tcggatgcgt cgtggcgatg tctatcctgt ggaccgtgcc
     5461 gagcaggcgc tgaaacattt tttccgtccc ggcaatctgc tcgccctgcg tgagctcgcc
     5521 ctccgccatg ttactgaaac cgtcgacaaa agcctggagt cctatcttga gcgcaaacgc
     5581 attgatcaga actggggtgt aagcgagcgc gttgccgttt gcatcagttc caatcccgcc
     5641 tcgcagcaat tgattgcgcg cggcgcgcga atggccaaag gccttgacgc tgagttcttc
     5701 gtgattcatg tggaacgggg tgatgaaggc agaacggaag accggaggct tgcgttggcc
     5761 gagaacattc gttttgctca caacctcggc gctcagattg tgcagattga aggagccatg
     5821 gttgccgcca ccgtggccca gttcgtgcgc gagtacaaaa tcacccaggt aatctttggc
     5881 cgctcagccg gacatggctg gcgcaagtat ctctacctga tggcgatcaa ccggtttctt
     5941 gccagcgcgc cttccgtgga tgtgcacatt gtgacccagg aggaatcctg atgcgcgagc
     6001 gcagccgcat cctggtggtg gatgatgaaa cccagatctc ccgtgtgctc aagaccacgc
     6061 tgagttcgca agggtacgag gtaaaaaccg cggcggacgg cgaagccggc ctggaagctg
     6121 tcaccgactg gcatcctgac ctgctgatta cggatctctc catgccgaag atgaacggcg
     6181 ttgagctgtg ccgcgcggtc cgcgagcact cgcagattcc catcatcgtg ctttctgtcc
     6241 gtgaggaaga gaagaacaaa gtagaagcgc tggatgccgg cgccgacgat tacgtgacca
     6301 agcctttcgg cgtaaatgaa cttctggctc gcgtgcgggc gaacctgcgc cgcgtggccg
     6361 ctaccgcaga gcctcctaac acgccgatcg cggccggcga cttctacatc agtccagaat
     6421 cgcggcaagt caaggtgcgg ggccaggaag tgcatctcac acccaaagag tttgatctcc
     6481 tcacttttat ggcccgccat cccgggaagg tgctcacaca tcgcgtgctg ttgaatgcgg
     6541 tgtggggagg gcagagcgtg cagcagccgg aatatctgcg cgtctttatc aaccagctgc
     6601 gcaagaagat cgagccggaa gacacaccac gctacatcct caccgatccg tgggttggat
     6661 atcgctttca gccgggcggc gacaaccagt agccgccctt atccctgacc gatcagcagc
     6721 cgcagggcct gccttctgca aggtcctgca ccggtgtcca gtcagccagc gtgtcatacg
     6781 tgaatttgaa cgtcatatcg tcacagcggt agagattccc ctgcggatcg cggatcagcc
     6841 agtcaccctt ctcggcgtgg attacaccgg attcggtctt cacttctgtg cgttcctgaa
     6901 cctgaactgc atcgaccacc agcggcttga tacttctgta aagcatgtca actgctcccg
     6961 tgggcaaatc gcccacagcc attggacgaa attccccata aggaacgcat tcgcgaagcg
     7021 tcaagagttc ataaatctgc agccgctcgc gcttacaaaa ccttaacgca tcgcttactc
     7081 cctccttatg cgtgacggta tgtacttaaa ttgtttccca gatgtaccga tccaggcagt
     7141 catgattgaa atgcgcgacc gagagctggg acaaggagtt tggccatgac actgttcatg
     7201 cttttcacaa tggcaacgta tctggcgatc gtcgcaatgc tatggtgctt ccgcggcttc
     7261 actcgcgaga tcaagcgggg caggagagtg atcgggctgc tggtgcgggt tgagcgacaa
     7321 gactcgccgg ggcccgggcc cagacgggct atgttggttg ctctgaaacc acaaacctcc
     7381 gtgcgcgcag caaaggagtg cacccggttc ccacgcgcag tgtgacatcg ggcgggattc
     7441 cttataaaac ctttacgttt tatcaaccct tttcttacgt tgcagaaatt caaattacat
     7501 tgcgggccga aaaagggccg cgggcgggaa caatgctgat cgagtcactc atcttagttg
     7561 cagtcgtgct catggcggtc tcttttcttg gaaagtgttt cttcgcaatt caccgcgaac
     7621 tacaccggca tcatgaatgc tgctcttctt ttctcatgct tgaagccgct cctcaggcgg
     7681 atccgggcgc cgagatgaaa gcaaacgtca ccgggatcgg cacggctcaa gggggaaagt
     7741 ccatgccaag cggccgaaag gtggctctga tcgtgttgct gcctgcgctt tttatcagcg
     7801 gcagtcagat caatgcacaa acagctccca ccagtgatgc tgaagtgcag caactgcgcg
     7861 aactggtgtt gaagctgcag tcgcgcattg agcaactgga gaataagcag ggcggtgttg
     7921 ctccagcccc gggcactcag acgatagtta cggctgcagt agccgatgcg gcgcctccgt
     7981 ccggcattag caaagaagac cgcaccgcgc tggacttcct gaagggcacg acctttagcg
     8041 gcgcgctcga cggctactac ggctacaact tcaaccagcc ggtcggccgt gtgaacctac
     8101 tgcgcgctta tgacgtgatg agcaacagct tcagcctcaa ccaggcgaac ttccttttgg
     8161 agcacgcgcc agcacccgat gcaggcaacc gcttcggtgt gcgcctcgac ttccagtacg
     8221 gccaggccac ggaaaccgta cagggcagcg ctgcgaatga actgcgtccg caggtctatc
     8281 gtccgctctg gcaggcctat ggaacgtacg tttttcctgc cggtagcggc gtgaccctcg
     8341 attttggaaa gtttgccagc gcgcttggca tggagggcaa ctacaacaaa gaccagatca
     8401 actactcgcg atcttactat ttcaatttcc tgccgtttta ccacatggga ttccgcgccg
     8461 gttacaacat aacgcccaag gtgaacctta cctactggct cgtgaacggc gcccagcagg
     8521 tggaagattt taacggcttc aagtcacagg cctttatcgt cacgctcaag cccaggagca
     8581 cagtcacgtg gagtgtgaac tactacttcg gccaggaaca gcgcgatgtg aacgctgtcc
     8641 tgaacccggg gttccccact ggtcccaccc agcccggact gccgacgacc aacatcatcc
     8701 cgtcaccaaa cgggcgcgag cacatttttg acagctactt gacctggaac gctacaccaa
     8761 agctcacact gctcggagaa ggcgattatg ttgtcaaccg gctgttcagc aattccgcgc
     8821 cgcaacac
//
LOCUS       DASQYP010000321         4558 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_36203, whole genome shotgun sequence.
ACCESSION   DASQYP010000321 DASQYP010000000
VERSION     DASQYP010000321.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 4558)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4558)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4558
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_36203"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..305)
                     /locus_tag="VE783_10425"
     CDS             complement(<1..305)
                     /locus_tag="VE783_10425"
                     /EC_number="2.1.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009245056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003864 - 3-methyl-2-oxobutanoate
                     hydroxymethyltransferase activity [Evidence IEA];
                     GO_process: GO:0015940 - pantothenate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-methyl-2-oxobutanoate
                     hydroxymethyltransferase"
                     /protein_id="HYX53854.1"
                     /translation="MSITSFIGGQHSSARPKVTTLSIQEKKHRREPITCLTAYDYATS
                     RLVDEAGIDMILVGDSLAQVVLGYDNTLPVTMEEMLHHTRAVRRAVKSALVIADMPFG
                     "
     gene            complement(538..1311)
                     /locus_tag="VE783_10430"
     CDS             complement(538..1311)
                     /locus_tag="VE783_10430"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53855.1"
                     /translation="MKRTVCLFILSVVTFGLATGCGSHMAPSNATSTTAPSPTPPVAN
                     PNAKTIAAIEALGGWENCTSCTGNPFAVYSMKQGIAAPSLSGSSARFQLLSGTKPFGA
                     ALWFKFLGAHDDATHFVYDLSFLADNPEAAQALEFNVSQSTGGSRYSFATQCDLAGTH
                     TWRVWDPGAQRWADAAVPCSAPAANTWNHLTWEFERDQGGNTVFTAVTLNGIRSTVNL
                     SMGHTADSSSGIDVGFQLDAVRTATPYSVWLDRISLTYW"
     gene            1473..1763
                     /locus_tag="VE783_10435"
     CDS             1473..1763
                     /locus_tag="VE783_10435"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53856.1"
                     /translation="MVTSEEHARLWNVIQNPPAGSKVEAAKKFGIDLTLNLRALQMTP
                     TERVRATEQALAFCEDLRAAMLKPKAQGRSEELDKQKHGQISPDHPMILILR"
     gene            complement(1750..2031)
                     /locus_tag="VE783_10440"
     CDS             complement(1750..2031)
                     /locus_tag="VE783_10440"
                     /inference="COORDINATES: protein motif:HMM:NF014636.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008641 - ubiquitin-like modifier
                     activating enzyme activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ubiquitin-like small modifier protein 1"
                     /protein_id="HYX53857.1"
                     /translation="MALTVRIPTYLAGFAGGSSVLSVESGPENVRELLDALWQAHPSL
                     RDRIVDEQGQLRQHVNIFVGDEAVAWNDGLESKVPDGVEVLIVPAVSGG"
     gene            complement(2032..3294)
                     /locus_tag="VE783_10445"
     CDS             complement(2032..3294)
                     /locus_tag="VE783_10445"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53858.1"
                     /translation="MPAVQHVSVKNGDVLLLVGTMKGAFFLRSDKSRKRWSMGGPYSA
                     GSPVYALAYDGRSGRNRVWWATQSFRWGTFLKSSDDFGKTSTEPETYSVKFPESSGLA
                     LKNIWQISAPASRPGKLYCGVEPACLFESSDNGATWTPVPGMLNHPHRPKWMPGGGGL
                     CLHTISPHPDNPESTIVAISTAGCYRTDDGGATFEAKNKGIRAVFLPDNYPEFGQCVH
                     KIARGAGRPERMYLQNHWGLYRSDNGGDSWTDIANGVPSDFGFPVVAHPQDPDTAYII
                     PVESDEYRCTPEGKLRVYRTRNAGESWEPLTSGLPQKNALETILRDSMATDMLDPAGI
                     YFGTRSGKVYGSSNEGKSWDVVIEGLPPVVCVRAALVGDGAGSVRGSAKKSAKSAARK
                     GASKSSAAPKTKPAAKKASKKKAARRSR"
     gene            3532..4470
                     /locus_tag="VE783_10450"
     CDS             3532..4470
                     /locus_tag="VE783_10450"
                     /inference="COORDINATES: protein motif:HMM:NF012955.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HYX53859.1"
                     /translation="MRRAVLCGVVFFLISGLHVFGQGQDFSKVQIKVQKVSGTVYMLE
                     GAGGNIGASVGDDGIVVVDDEFLPLADKIEAALKGITDKPVKFVLNTHWHGDHTGGNP
                     HFGEKAPIIAQENVRKRLATGGHTKFGDTPPAPKVALPVITFEDKVSVHLNGEDIRAI
                     HFPHGHTDGDSVIFFPQSNVVHMGDDFFNGNMFPFIDLDSGGSVQGMIAGDEKVLAEV
                     PDDVKIIPGHGPLASNEDLRKFIEMLKGTSGAVQAGIKAGKTLDQLKQEKVLAKWDAW
                     AHGFINADVFTEVLYDSLTKKTTGPKNDHGHMHSSN"
BASE COUNT          983 a         1258 c         1377 g          940 t
ORIGIN      
        1 ccaaaaggca tgtcggcaat gaccagcgct gacttcacag cgcgccgcac ggcgcgcgtg
       61 tggtgcagca tctcttccat ggtcacgggg agggtgttgt cgtagccgag cacgacctgg
      121 gccagcgagt cgccgaccag gatcatgtcg attccggctt cgtccaccag acgcgatgta
      181 gcgtagtcgt aagcggtgag gcaggtaatc ggctcgcgcc ggtgcttttt ttcctggatt
      241 gagagggtgg ttactttcgg tcgggcgctc gaatgctgcc ctccgataaa cgaagtgatg
      301 ctcattgtgc ctccagtgca gttcgggaaa cccgatacca cctgtcgccc cataggatgc
      361 gggcacgggt attgtagtcg cgggaaagtt cgggagctac aaaaaacgcg gatttaccgc
      421 agagaacgca gagcactaga gggaatgagg agccctatac agaccctcta agtggatgaa
      481 aacaaggctc ttttgttgtg ctgcgctctc cgcgtaccct gcgctcatgg gctctggtca
      541 ccagtaggtc aggctgattc tgtcgagcca gacggaatag ggcgtcgcgg ttcgaactgc
      601 atccagctga aatcccacgt caattccgct gctggaatca gcggtgtggc ccatgctcag
      661 gttaacagtg ctcctaatac cgttgagggt gacggcagta aaaacagtgt tcccaccctg
      721 gtcgcgttca aattcccaag tcagatggtt ccatgtgttg gccgcaggcg cagaacaggg
      781 cactgcggcg tcagcccatc gctgggcgcc cgggtcccat actcgccagg tatgtgtgcc
      841 tgcaagatca cattgcgtcg cgaagctgta acggctacca ccggtgcttt gcgacacatt
      901 gaactcaagc gcctgcgcgg cctcaggatt atctgccaga aaggaaaggt cgtaaacaaa
      961 gtgggtcgca tcatcgtgcg cgcccaggaa cttgaaccac aacgctgcgc caaagggctt
     1021 ggttccggaa agaagctgga agcgggctga ggaaccgctc agcgaaggcg cagctatccc
     1081 ctgcttcatg gaatagacag cgaacgggtt gccggtgcag ctggtgcagt tctcccagcc
     1141 gccgagagcc tcaatggctg ctattgtttt ggcgttggga tttgcgacag ggggcgtggg
     1201 tgagggcgct gtggtactgg tggcattgct gggcgccatg tggctgccgc atccggtcgc
     1261 gagaccaaaa gtgacaacgc tcaggatgaa cagacaaaca gttctcttca ttcttgggaa
     1321 ctctttccaa gtggctggat taagacggtg gcttttattg tgtgttttcg gggagtctat
     1381 aggaatccag aatagctgtg gagagtggaa gtggttctag ttctttggaa ttaagctatg
     1441 cggccgcctt aagcgtttag cattagccta gaatggtgac cagcgaagaa cacgcacggc
     1501 tctggaatgt gatccagaac cctcctgcgg gaagcaaggt tgaggccgcc aagaagttcg
     1561 gcattgatct gacgttgaac cttcgtgctt tgcagatgac gcccacagaa agagtcaggg
     1621 cgacggaaca agctctcgcc ttttgtgagg accttcgtgc tgcgatgctg aagcccaaag
     1681 ctcagggccg ttccgaagag ctcgacaagc aaaagcacgg tcaaatttcg ccagatcacc
     1741 ctatgattct catcctccgc tgaccgccgg gacaatcagc acttccacac cgtcggggac
     1801 cttcgattca agtccgtcat tccaggccac agcttcatcg ccgacaaaga tgttcacgtg
     1861 ctggcggagc tggccctgtt cgtccacgat gcggtctcgc agcgacggat gcgcctgcca
     1921 gagcgcgtcc agcagctcgc gaacattttc tgggccgctt tccacgctaa gcacactgct
     1981 gccgccggca aagccggcga gataggtcgg gattcgcaca gtcaacgcca tctatctgct
     2041 ccggcgtgcg gctttcttct tcgatgcttt cttggctgcc ggcttggtct ttggagcggc
     2101 cgagctcttg gaagcgccct ttctggcggc ggacttcgcg ctcttcttcg cgctgccacg
     2161 caccgagcct gctccatcgc cgaccagtgc ggcccgcacg cagacgaccg gaggaaggcc
     2221 ttcgattacg acgtcccagc tcttgccctc attgctggag ccgtagactt tgccgctgcg
     2281 agtgccgaaa taaattccgg caggatcgag catgtccgtg gccatggagt cgcgcagtat
     2341 cgtttccaga gcattcttct gaggcaggcc actggtgagc ggctcccagc tctcgccggc
     2401 gttgcgcgtg cggtaaacgc ggagcttgcc ttcaggcgtg cagcgatact cgtctgactc
     2461 cacgggaatg atgtatgccg tgtcgggatc ctgtggatgg gcgacgacgg gaaagccgaa
     2521 atcagagggc acgccgttgg cgatgtcagt ccaggagtcg ccgccattgt cactgcggta
     2581 gagtccccag tgattttgca ggtacatgcg ctccggccgc ccggcgccac gggcaatctt
     2641 gtgcacacat tggccaaact ccggatagtt gtcgggcagg aaaacggcgc ggattccttt
     2701 gttcttcgct tcaaacgttg cgcctccatc gtccgtgcga tagcagcctg cggtggagat
     2761 ggcgacgatg gtgctctctg gattatccgg atgaggggag atggtatgca ggcatagtcc
     2821 gccgccaccg ggcatccatt tggggcgatg gggatggttc agcatgccgg gaacaggtgt
     2881 ccacgtggcg ccgttgtcac tggattcgaa aaggcatgca ggctccacgc cgcaatacag
     2941 tttgcctggg cggctggccg gagcggaaat ctgccagatg ttcttgagcg caagtcccga
     3001 cgactcgggg aacttcacgg aataagtctc aggctcggtg gaggtcttgc cgaagtcgtc
     3061 ggatgatttc aggaaggttc cccagcggaa gctctgggtg gcccaccaca cgcgattgcg
     3121 gccggagcgg ccgtcatagg ccagcgcata aacgggtgat cccgcggagt aggggccacc
     3181 catgctccag cgcttgcgtg acttgtctga gcgcaggaag aaagcgccct tcatggtccc
     3241 gaccagcaac agaacatcac cattcttgac cgatacgtgc tgcaccgccg gcatgcattt
     3301 gcctccaagg gataaatcaa aagtttccgc tcattttaga cgtccatcat cgtagatggc
     3361 atacggggaa aagattttcc ttcccaccag tacgacgctc aggcatggcg gaatcgacag
     3421 ccgatttcga gatccgaaaa aatttctcct cagtttgaag tctcgtatcc cggcagctaa
     3481 gatgttggcg ccaagatcag caatcgccaa atcagcaatc aaggagcaga tatgcgtaga
     3541 gccgtcctgt gcggcgtggt gttctttctt atctccggcc tgcacgtatt cgggcagggc
     3601 caggatttca gcaaagttca gatcaaggtg cagaaggtct ccggcacggt ttacatgctg
     3661 gaaggggcgg gcggcaatat tggggccagc gtaggcgacg acggaatcgt ggtagtggac
     3721 gacgagtttc tgcccctggc ggacaagatt gaagccgcac tgaagggcat taccgataag
     3781 ccggtgaaat tcgtgctcaa cacgcactgg cacggcgacc acaccggcgg caatccgcat
     3841 tttggcgaga aggcgcccat catcgcgcag gagaacgtgc gcaagcgtct ggccaccggc
     3901 ggccacacta aattcggcga cacgccgcca gctccgaaag tggctttgcc tgtcatcact
     3961 tttgaagata aggtctcagt acacctgaat ggcgaagaca ttcgcgccat ccacttcccg
     4021 cacggtcaca ccgatggcga cagcgtgatc ttcttcccgc agtccaacgt cgtccacatg
     4081 ggggatgatt tcttcaacgg caacatgttt ccgtttatcg acctggacag cggcggcagc
     4141 gtgcagggca tgatcgccgg agatgaaaag gtgctggctg aagtcccgga cgacgtgaag
     4201 atcattcccg gacacggccc tctggcgagc aatgaggacc tgcgcaagtt catcgagatg
     4261 ctgaaaggca catcaggtgc ggtgcaggcg gggatcaagg caggaaaaac tctggatcaa
     4321 ttgaagcagg aaaaagtcct ggccaagtgg gacgcatggg cacacggctt tatcaacgcg
     4381 gacgtgttta ctgaggtcct gtatgacagc ctgacgaaga agaccaccgg gcccaagaat
     4441 gatcatgggc atatgcattc gagcaattag taaatagcaa ttagtaatta gccagatctg
     4501 atcagccgca attcaacgca ctcacgcacg catgggaaga ggcgctgcga ggaacggc
//
LOCUS       DASQYP010000322         3905 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_289934, whole genome shotgun sequence.
ACCESSION   DASQYP010000322 DASQYP010000000
VERSION     DASQYP010000322.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 3905)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3905)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3905
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_289934"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(244..513)
                     /locus_tag="VE783_10455"
     CDS             complement(244..513)
                     /locus_tag="VE783_10455"
                     /inference="COORDINATES: protein motif:HMM:NF021552.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2277 domain-containing protein"
                     /protein_id="HYX53860.1"
                     /translation="MCRNIKTLFNFDPPVTDDEVRAASLQFVRKITGFNKPSKANEGA
                     FESAVEEVAAVSMRLLKSLETTAPAKNREEEAAKAKLRAAARFGD"
     gene            complement(529..939)
                     /locus_tag="VE783_10460"
     CDS             complement(529..939)
                     /locus_tag="VE783_10460"
                     /inference="COORDINATES: protein motif:HMM:NF024953.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DoxX family protein"
                     /protein_id="HYX53861.1"
                     /translation="MATSTQSAVTVSGNSKAKIWTGRVISGLPAIMLLFGAALDLTRS
                     PMAMQGMAKYGYPAGALIPIGLAALVSAVLYIVPQTAVFGAVLMTAYLGGATATHVHA
                     GEPFFIPVLCGILVWIGLYLREDRLKDLAPFRKL"
     gene            1430..2803
                     /locus_tag="VE783_10465"
     CDS             1430..2803
                     /locus_tag="VE783_10465"
                     /inference="COORDINATES: protein motif:HMM:NF016101.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016788 - hydrolase activity, acting on
                     ester bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alkaline phosphatase family protein"
                     /protein_id="HYX53862.1"
                     /translation="MSTAASAQVPRSNHVYIVAEENRSYEHIVGSPDMPYLNSILPQG
                     TTATQFYSDMHGSLENYLIVTSGQYITHNNSTLATFDLDNIERHLLAQGKTFRSYAQS
                     LPFAGFTGLTSGEYLKRHAPLPYYTDMASSSLIMNHVSTTELAKDIANGTLPNFAFIT
                     PDAAHDMHDCPTTLSACLQTADAWLQANIAPLLASAPFQPGGDGVLIIWADEADLSTD
                     DRCSATVLTGCGGHILVAMIGPQVIPNGKSVFTYHHESVLKTMLMLEGEEVSFPSAAQ
                     NAPPMVDFFKSAGTVYVAAPSSSTVIGPAVHVSATASAPNPVIAMKIYVDSVAQYFAA
                     ANSVDTTLTLTNGTHHLTYQAWDSKGNVYKTATTINVVPPGVTILAPTTSTVTGSPVH
                     LAASAVAQNPVSAMRIYVDGVSDYSVSASSVDTSLGMTRGTHSVTFQAWDTTGAVYKA
                     NMSVTVQ"
     gene            2932..3690
                     /locus_tag="VE783_10470"
     CDS             2932..3690
                     /locus_tag="VE783_10470"
                     /inference="COORDINATES: protein motif:HMM:NF014862.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Clp protease N-terminal domain-containing
                     protein"
                     /protein_id="HYX53863.1"
                     /translation="MYERLTQSARRAIFFAAQDARAVRSAYIEPEHLLLGIISIGQPE
                     LGETMPFKRIEPDLRARLHPLPLESTSIRADIPISNVCKRCLAYAAEEAERLSSKAIT
                     PGHLLLGILREPNTLAAQVLEAHHVDLTQARAVISGLPPQNDFSLLQIEKITLQRRLK
                     FITVGQLATLAAFAVFLSQTSLSARQLLWIGGIWVCVVVLWSATYRSWNVDIKTQHRR
                     VALTVIQALLWGYGLLLSGWIIPIVLGIWRTFRR"
     gene            complement(3722..>3905)
                     /locus_tag="VE783_10475"
     CDS             complement(3722..>3905)
                     /locus_tag="VE783_10475"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53864.1"
                     /translation="RGTKVEFSFELPFGGMMCGRGEITWTDSQGLAGVRFNILSDEQY
                     SMLAGWIFLRENRLTA"
BASE COUNT          853 a         1223 c          988 g          841 t
ORIGIN      
        1 cctgcccgcc acagatccgc gactcacagc gattcacagg accgcagaag cacacaccca
       61 agccggactc gctgcggtta cgggcgaaca ttacgaaggc ggacactggc tgggtagctt
      121 cgccgtgtat ctggtaactc aaagagggtt accaaagaac caataaacta ttcctttgtg
      181 ttccttcgtg ccctttgtgg gaaacgtgtt gctgtatcac ccgcggacga ctcggcactg
      241 ctctcaatcg ccaaacctcg cggctgctcg cagcttcgcc ttggctgctt cttcctcgcg
      301 gttcttcgcc ggcgcggtgg tctctagcga tttgagcaat cgcatcgaaa ctgccgcgac
      361 ttcttccact gcgctctcga aagccccttc gttcgccttt gacggtttat tgaatcccgt
      421 gatcttcctc acaaactgta atgacgccgc gcgcacctcg tcatccgtga ccggcggatc
      481 gaaattaaaa agtgtcttga tgttcctgca cataattcac ctggacagct ataacttcct
      541 gaacggcgcc agatctttca accggtcttc cctgagatat agcccaatcc acaccaggat
      601 gccgcatagc acgggtataa agaacggctc gccggcatgc acgtgcgttg cagtcgcgcc
      661 gccgagataa gctgtcataa gcaccgctcc gaagactgcc gtctgtggca cgatgtagag
      721 aacagcgctg accagtgccg caaggccgat tggaatgagc gcgcccgcgg gatacccgta
      781 tttcgccatt ccctgcatcg ccatcggcga tcttgtgagg tccagggcgg cgccgaaaag
      841 aagcatgatg gccggtaggc cgctgatcac ccgccccgtc catatctttg cttttgagtt
      901 gccggacact gtcactgctg attgcgtgct cgtcgccact tggtctctcc tcttagctcg
      961 aatgaactaa aacggttttg gaattgctac ggtcaaaaaa gagtatctcg cccgctggca
     1021 gtattccgca agctgaccga atgcatgatc catgatcagg gttcagaatc tccggcatgg
     1081 cgtatggctc aaaccagacc aattattaaa ttccccaatg aaccaatggc cattgcccgc
     1141 tctggccttc cgaagtagcc ggtcatcgca cttcggagtc atgattttca cacagaatta
     1201 acccgcctta gtaccttaac ccgggacggt aaaaacatcg ccagctcagc agtttaagcg
     1261 tttctgaaca ctttcggagc cttaccaatc cttaactctc cctaagcgag cgtactgatt
     1321 ttttagaact acgagctgcg ccattatgcg cagcatgtca cggccaagtt cgctcgcaaa
     1381 aatgctctgt tatggatgga tgctgctcgc gggagccgca tcggtcatcg tgtcgacggc
     1441 cgcctcggcc caggtccccc gctccaacca cgtctacatc gtcgcggaag agaaccgcag
     1501 ttacgaacac attgtcggca gtccggatat gccctacctg aacagcattc ttccccaggg
     1561 caccaccgcc acgcagttct attcggatat gcacggctcg ctggaaaatt atctgatcgt
     1621 aacttccggc cagtacatca cgcacaacaa ctcaacgctg gcaaccttcg atctggacaa
     1681 cattgagcgc catctgctcg cccagggcaa gactttcagg tcctatgcgc aatcactccc
     1741 gtttgccggc ttcactgggc ttacttccgg cgagtatctg aagcgccacg ctccactgcc
     1801 ttattacact gacatggcga gcagttcctt gatcatgaac cacgtcagca ccacggaact
     1861 ggccaaggac atcgccaacg gcacgctgcc taattttgcc ttcatcaccc cggacgcggc
     1921 gcatgacatg catgattgcc ccacgactct gagcgcctgt ctccagaccg cagatgcatg
     1981 gctgcaagcc aatattgctc cactgctcgc cagcgctcct ttccagcccg gcggcgatgg
     2041 tgtgctgatc atctgggccg acgaagccga cctcagcact gacgatcgct gcagcgccac
     2101 ggtgctcact ggctgcggcg gccacatcct ggtggcgatg atcggccccc aggtcattcc
     2161 caacggcaag tccgtgttca cctatcatca tgagagcgtg ttgaagacca tgctgatgct
     2221 ggaaggcgaa gaggtcagct tcccctccgc tgcgcagaac gcgccgccca tggtggactt
     2281 cttcaagtca gcaggaacgg tttatgtggc cgcaccgtct tcttcgaccg tgatcggacc
     2341 cgccgtccac gtctccgcca ctgcgtcagc gcccaacccc gtcatcgcca tgaagattta
     2401 cgtggatagc gtggcgcaat actttgccgc ggccaattcg gtggatacca cgctcaccct
     2461 gaccaacggc acgcaccacc tgacctatca ggcctgggac agcaaaggga acgtctataa
     2521 gaccgcgacc accatcaacg tagttcctcc gggcgtgacg atccttgcgc ctaccacttc
     2581 aacagtgacc ggatcgccgg tgcatctggc cgcttcggct gtggcgcaaa acccggtctc
     2641 cgcaatgcga atctacgttg atggcgtaag cgactacagc gtgagcgcca gctcggtgga
     2701 cacgagcctc ggcatgacca ggggaacgca cagcgtcacc ttccaggcct gggacaccac
     2761 tggcgcggtc tacaaagcaa acatgtcagt tacggtgcag taacacgcac cagctctgct
     2821 ggggagcaga aagggagccg gcaacttgcg gctccctttt gtatttatcc gacaaaaacg
     2881 agcaacaccg cgttaacagt accaactctg ttcaggccta aaataggctg cgtgtacgaa
     2941 cgcctcacgc agtcggcccg acgcgcgatc ttctttgcgg ctcaagacgc aagagccgtg
     3001 agatcggcct acattgagcc cgaacacctt ctgcttggca tcatcagcat tggtcagcca
     3061 gagttgggcg aaacaatgcc attcaagcga attgagccgg atttgcgcgc acgattgcat
     3121 ccgttgccgc tggaaagcac atcgatacgc gccgacattc ccatctccaa cgtttgcaag
     3181 cgctgtcttg cgtatgcggc tgaagaagcg gaacgactca gctccaaagc gatcactccc
     3241 ggacacctgc tgctcggcat cctgcgtgag ccaaacactc tcgctgcaca agtgctggaa
     3301 gcgcaccacg tcgacttgac gcaggcccgt gccgtcatat caggcctccc accgcaaaat
     3361 gatttttcat tgcttcagat cgagaaaatc actctccagc gtcggctcaa gttcattacc
     3421 gtgggacagc ttgccacgct tgctgccttt gccgtgttcc tatctcagac ttccctcagc
     3481 gcaagacagc ttctatggat tggagggata tgggtttgcg tcgtggttct gtggagcgcc
     3541 acttaccgtt cgtggaacgt tgatatcaaa acgcagcacc gcagagttgc cttgacggtg
     3601 attcaagcac tcttatgggg atatgggctc ctgttatcag gatggattat cccaatcgtg
     3661 cttggaatct ggcggacctt tcgtcgctag cgtaaaagca cccttgttat ggtgctgcag
     3721 ctcaggcggt aagcctgttc tcgcgcagaa aaatccagcc ggccagcata ctgtactgct
     3781 cgtcactgag gatgttgaag cgcacgcccg ccagcccctg agaatcggtc caggtaattt
     3841 ccccgcgacc gcacatcatg ccgccaaacg gcagctcaaa gctgaactcc accttggtac
     3901 cccga
//
LOCUS       DASQYP010000323         6689 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_246552, whole genome shotgun sequence.
ACCESSION   DASQYP010000323 DASQYP010000000
VERSION     DASQYP010000323.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 6689)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6689)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6689
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_246552"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            133..570
                     /locus_tag="VE783_10480"
     CDS             133..570
                     /locus_tag="VE783_10480"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53865.1"
                     /translation="MSAVRKVMSYILLAVLAGNWSQTAAAQFEIAPDHFQEWPDSYSQ
                     KKLATTLNVDQEQLAAAQQELANCQALLEEQATAVEQARDSAVGSGAMGDLASIYLDQ
                     QNTESVRLQALERQLAPRMALARAILQGSQAAQTVMAKASKTR"
     gene            complement(712..1686)
                     /locus_tag="VE783_10485"
     CDS             complement(712..1686)
                     /locus_tag="VE783_10485"
                     /inference="COORDINATES: protein motif:HMM:NF014068.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HYX53866.1"
                     /translation="MIDVTILLLPDTFSSTAIGPLEVFRHAGTLWNRLTGSRPVPQFR
                     VTTASVDGRAVKCDGPIIIQPDHALGEIRKTDLIFVPTTGLGIDDVIERNAQAIPFLK
                     RWQKRGASIASVCSGVGLLAATGMLDGKRATTHWALADRFREMYPKVKWMPELMVTED
                     GGFYCGGGVHAALDLSLYLVEKFCGHEVAMQTAKALLIETPRAWQAGFGLVPLKTQHS
                     DQSISTAQEWLHENFHKNFPLEATAKRVGMSLRNFVRRFKRATGDSPLMYLQKLRIAA
                     AKRLLESDHRSVQEISDAVGYQDVAFFRSLFQRHTGVSPSAYRQRFGV"
     gene            1842..2174
                     /locus_tag="VE783_10490"
     CDS             1842..2174
                     /locus_tag="VE783_10490"
                     /inference="COORDINATES: protein motif:HMM:NF014664.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051920 - peroxiredoxin activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carboxymuconolactone decarboxylase family
                     protein"
                     /protein_id="HYX53867.1"
                     /translation="MSEHYHDAKDLGLLKEMSKLAPTEFNAWVNLDKIVGREDGAIPR
                     KYRELIALAVACTTQCPYCLDVHSKNAKKAGASREEVAETALLAAALRAGAGATHGLM
                     ALKLYDQE"
     gene            2218..2685
                     /locus_tag="VE783_10495"
     CDS             2218..2685
                     /locus_tag="VE783_10495"
                     /inference="COORDINATES: protein motif:HMM:NF042549.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6632 domain-containing protein"
                     /protein_id="HYX53868.1"
                     /translation="MAVAKEKLDSSFGTAQGHASSGERVAQQPASTQYLKLALRAVGL
                     IFTFGIYPLTIVWPSGWAWHASGHSHYLDMILGVYATLGIFLLIASRNPLEHRSLIWF
                     AVWSSVVHGAIMAAQSLMNPEHIGHLWGDVLALFAVAALLAVLMQRSTVANTA"
     gene            complement(2708..3793)
                     /locus_tag="VE783_10500"
     CDS             complement(2708..3793)
                     /locus_tag="VE783_10500"
                     /inference="COORDINATES: protein motif:HMM:NF015047.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0018580 - nitronate monooxygenase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nitronate monooxygenase"
                     /protein_id="HYX53869.1"
                     /translation="MKSFCELHGMTIPVVQAPMAGGPNTPEMVAAVSNAGGLGSLGAE
                     YLSPAQIEKDIARIRQLTQRPFAVNLFSPDADQPLAGDFSSVAAFLRPIHERLGIAPP
                     EPPQSPGEDFEDQMDLLIRLKVPIISSTLGLFPAAVMERLKREGIYVIGTATTVEEAR
                     MQAAYGVDAITAQGSEAGGHRGTFTADAEQALVGTIALVPQIVDAVKVPVLASGGIMD
                     GRGIVAALSLGAAAAQMGTAFLACDESGANPAYRKALLAAHEDQTTITRAFSGRPARG
                     LRNDFIDRWNQAGVATMSFPWHNTLTRAMRRAGASQQDSSVQSLWAGQGIRMLRRGSA
                     TSIMNQLRQEIVDALEAARERLPLSLQ"
     gene            complement(3834..4802)
                     /locus_tag="VE783_10505"
     CDS             complement(3834..4802)
                     /locus_tag="VE783_10505"
                     /inference="COORDINATES: protein motif:HMM:NF024989.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quinone oxidoreductase"
                     /protein_id="HYX53870.1"
                     /translation="MKAIQVQKTGGPEALTLVDIPVPPPKANEALIKIGAIGLNFIDV
                     YFREGRYPAPVPFVNGQEAAGTVTAVGSDVKSVKVGDRVAYTNVLGSYAEYQAAPAER
                     LVKIPDGVSDQQAAAAMLQGMTAHYLVNTTYPLKKGETALIHAAAGGVGLLLVQMAKN
                     LGARVIGTAGTAEKARLAREAGADDLIIYTEQDFEAETKRLTDGKGVHVIYDGVGKST
                     FQQDLNLLRPRGYLVLFGASSGAVPPFDPIKLAQKGSLFLTRPSLAHYIAVREELEQR
                     AGDVLGDVASGKLKLRIGHTYKLEDVQQAHRDLEGRKTTGKVLLIP"
     gene            5116..5994
                     /locus_tag="VE783_10510"
     CDS             5116..5994
                     /locus_tag="VE783_10510"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF016041.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_process: GO:0006629 - lipid metabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sterol desaturase family protein"
                     /protein_id="HYX53871.1"
                     /translation="MPQIPNLIHLAIPGFILLLVLEALADARMRRELYLLPDTAASLA
                     MGLGNVFLGLAAKSLVLAAFTVVYSFSRAHHIGFNIGWSWRAWLLVFFADDFSYYWFH
                     RVSHECRFFWASHVVHHSSQRYNLGTALRQTWTGSFMSWIFWLWMPLIGFHPVMVLTM
                     QAVSLLYQFWIHTEIVRHLGPLEHVLNTPSHHRVHHGSNRQYLDRNHAGILIIWDRLF
                     GTFEPEVDRPIYGLTKNINTYNPLRIAFHEWLDIWRDVRSAPSLRLKLRYIFGRPGWR
                     EEEQESAASASVAPIA"
     gene            complement(6262..>6689)
                     /locus_tag="VE783_10515"
     CDS             complement(6262..>6689)
                     /locus_tag="VE783_10515"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53872.1"
                     /translation="QDVQAAVAGRAALEGLLTAAGRGIPAEGGIEEGRPVFGPPLVGL
                     PMVMAPTNEDGVNFLFGWMAPKLGFLVLMMQSPFPDCIAMRRLDDETWQLVFIELEYR
                     SRNFIEHGHDPSKVDLIVCWKHDWEDCPVEVVELSRFFM"
BASE COUNT         1294 a         2022 c         1996 g         1377 t
ORIGIN      
        1 agaaaactcg cgtatgttcc gggagcagca ggtgaaatgc gtttgatggt gtaagcatcc
       61 gctggcggaa ctttccggta cttctcgctt tatccagtaa ctgaaacagc atcacccccg
      121 gaaagagaag gtatgtcagc agttagaaaa gtaatgagct atatcctgct ggccgttttg
      181 gctgggaact ggtcccagac tgcggccgca caatttgaaa tcgccccaga ccactttcag
      241 gagtggcctg attcatattc acagaagaag ctggcgacta cattgaatgt ggaccaggaa
      301 cagcttgccg ctgcgcagca ggaactggcg aattgccagg ctctgctgga ggagcaagcc
      361 actgccgtgg agcaggcccg cgacagcgcg gtgggctcag gcgctatggg agacctagct
      421 tccatctacc tggatcagca aaacactgag tcggtgcggc tgcaggcgct cgaacggcag
      481 cttgcgccgc gaatggcgct ggcgcgggca attctccagg gctcccaggc ggctcaaacc
      541 gtgatggcga aggcgagcaa gacccgctga gcaggattgc tgcaggcaac tggccggtcc
      601 cagcaaccag gatttccaaa ggagtggaag cattagcttc cgctcctttg ctatgtgcgt
      661 gataagcgtg ggccggacgg gcgtgaagcg gccccattcc ggctcaacgg cttaaactcc
      721 aaaccgctgc cggtacgcgc tgggtgagac gccggtgtgg cgctgaaaca ggctgcggaa
      781 aaaggcgaca tcctggtagc ccacggcgtc acttatctcc tgaacgctgc gatggtcgct
      841 ttccagcagt cgcttggcgg cggcaatacg cagcttttgc agatacatca gagggctgtc
      901 tcccgtggca cgcttgaagc ggcgaacgaa gttgcgcagg ctcataccaa cgcgtttagc
      961 agtggcttcc agaggaaagt tcttgtgaaa attttcgtgc agccactcct gggcggtgga
     1021 gatgctttgg tcactatgtt gggttttgag cggcacgaga ccaaacccag cttgccaggc
     1081 gcgcggcgtt tcaatgagca gtgctttggc ggtctgcatg gccacttcgt gtccgcagaa
     1141 tttttcgacc aggtaaaggc tgagatcgag cgcggcatgg acaccgccac cgcagtagaa
     1201 gccgccatct tcagtgacca tcagctccgg catccacttt actttcgggt acatttctcg
     1261 aaatcggtcg gcgagagccc aatgggtggt ggcgcgtttg ccatcgagca tgccagtggc
     1321 cgccagcaaa ccgacgccgg aacaaaccga cgcaatggaa gcgccgcgct tttgccatcg
     1381 cttgaggaag ggaatcgcct gcgcgttgcg ctcgatcacg tcatcaattc cgagaccggt
     1441 ggttggaacg aagattagat ctgttttacg aatttcaccg agcgcgtgat caggctgaat
     1501 gatgattggg ccgtcacact ttaccgcgcg cccgtctacc gaagcggtgg ttacacgaaa
     1561 ctgaggcacg ggccgggagc ccgtgaggcg gttccacagc gttcccgcat ggcgaaagac
     1621 ttccaggggc ccgatggcgg tggaggagaa cgtatcggga agcaacagga tggtgacgtc
     1681 aatcataagc gctcctgggt gatggccggc cacgcggctg gaaatgcggg tggcgcaatc
     1741 acctacttac aatggcatat ttgccacttg ggttgcaagc atgccgagac tactctcaac
     1801 agtgacaatc agaaatgtgc acattgacca aggagatgag aatgagcgaa cactaccatg
     1861 atgcgaaaga cctgggcttg cttaaagaga tgagcaagct tgcgcccacg gagttcaacg
     1921 cctgggtaaa cctggacaag attgtgggtc gcgaagatgg cgcgattcca cggaagtacc
     1981 gtgagctgat tgcgctggca gtggcctgca ctacgcagtg tccgtactgc cttgacgtgc
     2041 attcgaagaa tgcgaaaaaa gccggcgcga gccgcgagga agtggcggaa accgctctgc
     2101 tggctgctgc gctgcgtgca ggggccggtg ctacacacgg cctgatggca ctgaaacttt
     2161 acgaccagga atgagccggt acgggcggac aagaggatgc aaggaaagga gaaggaaatg
     2221 gcagtcgcaa aggaaaaact agacagcagt ttcggaacgg cgcagggtca cgccagttca
     2281 ggagagaggg tggcgcagca gccggcttca acgcagtatc tgaaattggc tctgcgcgca
     2341 gtgggattga tcttcacgtt tgggatctat cctctgacga ttgtgtggcc ctctggctgg
     2401 gcctggcacg cgagcgggca ctcgcattac ctggatatga tactgggtgt ttacgcaacg
     2461 cttgggattt ttctgctgat tgcgagccgc aacccgctcg agcaccggag cctcatctgg
     2521 ttcgcggtgt ggtccagcgt ggtccacggg gcgattatgg cggcgcagtc gctcatgaac
     2581 ccagagcaca ttgggcacct ttggggtgac gttctggcgt tgtttgcggt ggccgcgctg
     2641 ctggcggtgc tcatgcagcg gagcacggtt gcgaatactg cgtaagcagt cgaggcgcgc
     2701 gcgagtttca ttgcaaggag agtggcagcc gctcgcgcgc ggcttcgagg gcatccacga
     2761 tttcctgccg caactggttc atgatgctgg tggctgatcc ccggcgcagc atgcggatgc
     2821 cctgcccggc ccagagcgac tgtacgctgc tgtcttgttg agacgcgccg gcgcggcgca
     2881 tggcgcgggt aagagtgttg tgccatggaa atgacatggt tgcgacgccg gcctgattcc
     2941 agcgatcgat gaagtcattg cgcaggccgc gcgcgggccg tccggagaag gcgcgcgtga
     3001 tagtagtctg gtcctcatgc gccgcgagga gtgctttgcg gtatgccggg ttggcgccgg
     3061 attcgtcgca ggcgaggaaa gcggttccca tttgcgctgc ggcagcgccg aggctgagcg
     3121 ccgcgacaat gccgcgcccg tccatgatgc cgccggaggc gagcacggga accttcaccg
     3181 cgtcgacgat ctgcggcaca agggcgatgg tgccgacaag cgcctgctca gcgtccgcgg
     3241 tgaacgttcc gcgatggccg ccggcttcgc tgccctgggc ggtaatggcg tcaacgccgt
     3301 acgcggcttg catcctggct tcttcgaccg tggttgcggt gccaatcacg taaatccctt
     3361 cgcgcttgag gcgttccatg actgcggcag ggaagaggcc gagcgtggag ctgatgatcg
     3421 ggactttcag gcggatgagc agatccattt ggtcttcgaa atcttctccc ggcgattgtg
     3481 gaggttccgg cggagcaatg ccgagtcgct cgtgaatcgg gcggaggaat gcggcgaccg
     3541 agctgaagtc gcccgcgaga ggctggtcgg catcggggga aaagagattg acggcgaatg
     3601 gccgctgcgt gagctggcgg atgcgcgcga tgtctttttc gatctgcgca ggtgaaagat
     3661 actccgcgcc gagagagccg agcccgcctg cgtttgatac cgcggcgacc atttccggcg
     3721 tgttagggcc gcccgccatg ggcgcctgca ccacgggaat cgtcatgccg tgtagttcac
     3781 aaaaagactt cataaatacc gggcccgcgt tcgtatagga aagtttgtgt gagttacggg
     3841 atcagcagca ctttgccggt ggtcttgcgg ccttcaaggt cgcgatgcgc ctgctgcacg
     3901 tcttcgagct tgtacgtgtg gccgatgcgc agcttgagct ttccggacgc gacgtcgccg
     3961 agcacgtccc ccgcgcgctg ctcgagttct tcgcgcacag cgatgtagtg cgccaagctt
     4021 gggcgcgtaa ggaaaagcga gcctttttgc gccagtttga tgggatcgaa cggcggcacc
     4081 gcgccgctgg acgcgccgaa gagcacaagg tatccgcgcg gacggagcag gttcaggtcc
     4141 tgctggaagg tggatttgcc cacgccatca tagatcacgt ggacgccttt gccgtcggtg
     4201 agccgtttgg tttcggcttc gaagtcctgc tcggtataaa taatgaggtc gtccgctccg
     4261 gcctcgcggg cgagcctggc tttctccgct gtgcctgccg tgccgatcac gcgcgcgccc
     4321 aggttcttcg ccatttgcac cagcagcagc ccaactcctc cggcggcggc gtggatcagc
     4381 gcggtctcgc ctttcttcaa cggataggtg gtgttgacga ggtagtgcgc ggtcatgccc
     4441 tggagcatcg cggcggccgc ctgctggtca gagacgccgt cgggaatttt caccagacgc
     4501 tcggcgggcg cagcctggta ttcggcgtag ctgccgagca cgttggtgta ggcgacgcgg
     4561 tcgccaactt tcaccgactt cacgtcgctg cccacggcag tgaccgtgcc cgccgcctcc
     4621 tggccattta cgaatggaac cggcgcaggg tagcggccct cgcggaagta cacgtcaata
     4681 aagttgaggc caatggcgcc gatcttgatg agggcttcgt ttgctttcgg cggcggaacg
     4741 gggatatcga ccagcgtgag ggcttcgggg ccgccggttt tctggacctg gatggctttc
     4801 atggcgcgat gttctcctga tagctcgacc gaaaattgta attcattctg cgcagaggcc
     4861 gcgaaacaag cgcacagaaa caccttggcc actgattctc acagatgaca gagatcaaca
     4921 aagctgccag ctactggctg ctagcttgaa ttgggcggag cgcgcccctg atttcgaaaa
     4981 tctcaccact gattctcaca gatcaacact gatcaagcgg ctggttgtca gcgttgatca
     5041 gttcaatcag cgttatcagc ggtaagcttt tcgcctgcgg cgcgacctcc aaatgcgcta
     5101 cactgctctt gctgtatgcc gcagattccc aacctgatcc accttgcgat cccgggcttc
     5161 attctgctgc tggtccttga agccctcgcc gacgcccgca tgcgccgcga gctctacctc
     5221 ctccccgaca ccgcggcctc gctcgcgatg ggcctcggca acgtcttcct cggactcgcc
     5281 gccaagtcgc tcgtcctcgc tgcgttcacc gtggtctaca gcttctcccg cgcgcaccac
     5341 atcggcttca atatcggatg gtcatggcgc gcctggctgc tcgtcttctt cgccgacgac
     5401 ttctcctact actggttcca ccgcgtctcc cacgaatgcc gcttcttctg ggcatcgcac
     5461 gtcgtgcatc attcttcgca gcgttacaac ctcggcaccg cgctccgcca gacctggacc
     5521 ggcagcttca tgtcctggat cttctggctc tggatgcccc tcatcggctt ccatcccgtc
     5581 atggtgctca ccatgcaggc cgtcagcctg ctctaccagt tctggatcca cacagaaatc
     5641 gtgcgccacc tcggcccgct ggagcacgtg ctcaacacgc cgtcacacca ccgcgtgcac
     5701 cacggctcca accgccagta cctcgaccgc aaccacgccg gcatcctcat catctgggac
     5761 cgcctcttcg gcaccttcga acccgaagtt gaccgcccca tctacggcct taccaaaaac
     5821 atcaacacct acaacccgct gcgcatcgcc ttccatgagt ggctcgacat ctggcgtgac
     5881 gtccgctccg caccgtctct ccgcctcaaa ctccgctaca tcttcggacg ccccggctgg
     5941 cgcgaagaag agcaggaatc ggctgcctcc gcctccgtcg caccaatcgc ctagttttcc
     6001 gacgtccagt tcctccaagc cctctgcatc ctcgcgccta ctcctctcgc ttcgacgttg
     6061 aactccttcg cgcctccgtc atagccgttt cagccttgat ccaatctagc tgccagtagc
     6121 tattagcttt tttagatcag tgtcatcagt gcaaatcagt ggtgagattt tgcttttatc
     6181 tgcgctctct gcgtcctctg ctgtgagaaa gtttgtctcc cgatgacgcg cgatgtcggc
     6241 gatgacggcg atctcgcgcg attacatgaa aaaccggctc agctccacca cctccaccgg
     6301 acagtcctcc cagtcatgct tccagcacac aatcaaatcc accttgctcg gatcatgccc
     6361 gtgttcaata aaattcctgc ttctgtattc cagttcaatg aacaccagct gccacgtctc
     6421 gtcatccagc cgcctcatcg ctatgcaatc cggaaatggc gactgcatca tcaacaccag
     6481 gaaccccagc ttcggcgcca tccagccaaa cagaaagttc actccgtctt cattcgtcgg
     6541 cgccataacc attggcagcc ccaccagcgg aggcccaaac accggacgcc cttcttcaat
     6601 ccctccctct gctggaatcc cgcgcccggc tgccgtcagt agtccttcca acgccgctcg
     6661 ccctgccacc gccgcttgca cgtcttgca
//
LOCUS       DASQYP010000324        12523 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_269257, whole genome shotgun sequence.
ACCESSION   DASQYP010000324 DASQYP010000000
VERSION     DASQYP010000324.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 12523)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12523)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12523
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_269257"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..205)
                     /locus_tag="VE783_10520"
     CDS             complement(<1..205)
                     /locus_tag="VE783_10520"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53873.1"
                     /translation="MQNPVKSILANLDAEAWLRFLMAVAGLALAFTAAVFSSAAKAAG
                     NPTATAIFASSALLLAGIVAVTTV"
     gene            693..3551
                     /locus_tag="VE783_10525"
     CDS             693..3551
                     /locus_tag="VE783_10525"
                     /inference="COORDINATES: protein motif:HMM:NF024883.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HYX53874.1"
                     /translation="MRKDSIIRISAIGLALVTAAAVVFAVINFQKENQNPTPDDGAWW
                     VEQSGALTAKSVVPGGPADKAGIKQGDQLLAIRAGVNEQDHKVESFAAFQRQLSRVGV
                     LRTATYILSRHGAHFEASVILAATDKSLFLGLRLIALIYLGIGMYVLFRRWTAPKSTH
                     FYVFCLVSFVLYSFHYTGKLNTFDWIVYWANIAATLLQPALLLDFAVTFPEKRRLLVK
                     HPSLLSLVYVPAAALMILQVTAITEFEASELLRWSLDRRQMIYFTVYFVVAAAIMWDS
                     YRRANTPVKQQQMKWISRGTVLAIAPYTAFYVLPYILGFVPTPLMKVSVLSLVFLPLT
                     FGYAIVRYRLMDVDIVFKRGVAYTLATAAIVGAYFFVIGSLAELVHARLPNAGTAGLI
                     AGMIITALLFEPLKNWIQERVDRFFYRKRYDYRRTLVEFGRELSSETDLSAMLISVID
                     RLSRTLGVQRIAIFLATGEPEQPFEMVKSYGISSGAAGPLDLSFLVVDQPEQYQGHKF
                     FDNTRRALAQNATARDTIAKLNLNYYIPCTVQNDTIAVLGLGKTTSGDFLSSEDVELL
                     ETLAGYIGIAIQNARLYASLEQKVAEYERLKDFNENIVESISVGVLAVDLEDRVESWN
                     SQMEVMYALPRSQVLGERLSEVFPATFMEEFYRVRQNPGVHNLYKFRLNTPAGDTRTA
                     NIAIAPLVTRKFSVIGRLIIVDDITERIDLESQLSQAEKLSSIGLLAAGVAHEVNTPL
                     AVISSYAQMLTKQISGDAKLSALLEKITRQTFRASEIVNNLLNFSRTSATEFTDVNLN
                     RIISETLTLLEHQFKTSRIKVETELYENLPTIHGNPGKLQQVFLNLFLNAKDAMAGNG
                     GTLRVATSNGTSVVVSVGDTGTGIAPEHINKIYDPFFTTKTAPREGQSRGTGLGLSVT
                     YGIIQEHAGKIRVESKPGTQKGTVFHLEFPLIRKAVNV"
     gene            3544..4977
                     /locus_tag="VE783_10530"
     CDS             3544..4977
                     /locus_tag="VE783_10530"
                     /inference="COORDINATES: protein motif:HMM:NF025885.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54 dependent transcriptional regulator"
                     /protein_id="HYX53875.1"
                     /translation="MSEAAVLSRPPAQSSATGSILIIDDEAAIRESLETLLEFEGYVV
                     HSAETGEEGLSKIGEHPYDLVLLDFALPDRNGLEILADIRDRDPQLAVIMITAYGTVD
                     NAVRAIQSGASNFIQKPWDNEKLLADVRAAVARRRAEEQNEQLKRALKERYNFENIVG
                     KSDPMLRIFDLVGQVAPSRSTVLIQGESGTGKELIAKAIHANSPRKNQPFVPVNTGSM
                     PTDLLESTLFGHVKGAFTSAIASKKGLFEVADGGTIFLDEIGSMGLETQSKILRVLQD
                     KKFMHLGGVHEIQVDVRVIAATNVDLKHLVKEGKFREDLFYRLNVITIDLPPLRSRAV
                     DIPLLVNHFLTSFSQENGKPARKISPEALRPLMDYGWPGNVRELENVIERAVVLSNTP
                     VIGIDLLPDHIVGRGAAEKMFEHRPDASLFEIVEDCERRLIVDMLEKCNWNQTEAAER
                     FHIPLSTLNQKIKRLSIEVRRKGAREQ"
     gene            complement(4949..5617)
                     /locus_tag="VE783_10535"
     CDS             complement(4949..5617)
                     /locus_tag="VE783_10535"
                     /inference="COORDINATES: protein motif:HMM:NF018446.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022841 - potassium ion leak channel
                     activity [Evidence IEA];
                     GO_process: GO:0071805 - potassium ion transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TMEM175 family protein"
                     /protein_id="HYX53876.1"
                     /translation="MNPQPVSVRSILHSVQLSKGRVEALTDGIFAIAMTLLVLELKVP
                     DLPKTAATQEILRRLGEEMPAFFSFLISFLYCGVLWILHHMAMHFVRHVRMALVWLNV
                     MFLLTISVLPFSCALLGHFIRNLTAQEIYFGNMFLASALLWTQWAIARKRGMLNEDDP
                     RTVRVMGQQLAVFPLALAAAMLATTYKPTTGFYAMTLVLLGFRIWQRRFVRMEATVPA
                     RPSA"
     gene            5715..6488
                     /locus_tag="VE783_10540"
     CDS             5715..6488
                     /locus_tag="VE783_10540"
                     /inference="COORDINATES: protein motif:HMM:TIGR00056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HYX53877.1"
                     /translation="MELISPTDIVKRNVSSVQDYAALSWRSLTNVFARPLYMADAIQQ
                     ADSIGVGSLPIVVLTGMFTGMVLALNSANTLERFGSLSMTGQLVAISMVRELGPVLTS
                     LMVAGRNASGMASELGSMKVTEQIDAMRALGTDPYKKLVTPRVISTVFMMFFLTILSD
                     LVGLVGGYVISFLLLGLDTFQYWNTAYQSLTYNDVVTGLVKPIFFGFIIATVGCYYGL
                     STKGGTQGVGRATTQAVVAASVLILAVDVVLTQLMLSMK"
     gene            6494..7330
                     /locus_tag="VE783_10545"
     CDS             6494..7330
                     /locus_tag="VE783_10545"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HYX53878.1"
                     /translation="MGSPLEFPSAAKLDTIHKAIIFDNVSLCFEDLVLLDGVSFELKK
                     GETKVMLGVAGSGKSTILKLCLGLLRPDDGHIYVLGHDVTAMKEQELFDLRSKVGIVF
                     QESALFDSLNVRDNVAFRLTEEKLPQDEIESRVREALRFVELEQAIEKLPSELSGGMR
                     RRVGIARAIITHPEILLYDSPTGGLDPITSTTIIELIMKQRDVAKTSALLVSHRLQDG
                     FMLASHYYDPVTNTMRAVDGRPMRDVHTSFMILKDGKVIFDGTAHDLGEIQDPYIKEY
                     IS"
     gene            7461..8804
                     /locus_tag="VE783_10550"
     CDS             7461..8804
                     /locus_tag="VE783_10550"
                     /inference="COORDINATES: protein motif:HMM:TIGR01891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004180 - carboxypeptidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase"
                     /protein_id="HYX53879.1"
                     /translation="MKRSLLLLLLLFAGITAYGQNTLNQQVDSVFPDAKALYLDLHQH
                     PELSGHETRTGGLVAEKLRALGYEVTEHVGGTGVVAIMKNGPGPTVMLRTELDALPVT
                     EETGLPYASKAHAKDDNGRDVGVMHACGHDVHMSSLIGTATIMARSKDLWHGTLELVG
                     QPAEETITGAKKMVDDGLFTRFPRPDVGVALHDENGIATGQVGITPGYAKAAADSLRI
                     TVYGKGGHGARPESTIDPVLIAASIAVRLQSIISREIHPGDAAVITVGYIQAGTKNNI
                     IPNEAQMGLTVRSYKPEVRQHLLAAIERVAKAEAMASGADKMPLVEKYESTSAVYNDP
                     VLTEHLAAVLESVVGKGNVINEPPLMTSEDWAMFVEQGIPGFYYTLGVADPQKLKEAR
                     AAGKELPSNHSPLFAPVVDPALHTGIATEVTVLRSLLKGTPADVKKITEQKSGGF"
     gene            8928..9923
                     /locus_tag="VE783_10555"
     CDS             8928..9923
                     /locus_tag="VE783_10555"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53880.1"
                     /translation="MGKSTAGFVLAVFLLFSSLLSAQAQNSSCTVNMPVVLVDKQGNL
                     LGGASPKDLTIEVHRQKLAIESLSYDTGPRRVLFIVDTGRHLPAEVRKMEYTLITHLM
                     ETARTGDTFGLLTTRGALRQVRFEDGNGAVNRAVLELFADAREDKKAGPMMDTIAEGL
                     TWFGAPQPGDAILLMSDQLVPYDTLSQLRGGYAVDVRPLNESSKTTFKKLTELLALHK
                     VRAFGIQFSGVLHDPYTYEATDENLAGLCIGSGGYVIVDAMTPFGGYQLTSARIDGLQ
                     KRVYQLTGAIAEYYVAKLKAPAAAEKQQWRIELARDLRNNTYALYPRWVGACDNE"
     gene            complement(9960..10739)
                     /locus_tag="VE783_10560"
     CDS             complement(9960..10739)
                     /locus_tag="VE783_10560"
                     /EC_number="3.1.26.4"
                     /inference="COORDINATES: protein motif:HMM:NF000594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0004523 - RNA-DNA hybrid ribonuclease
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease HII"
                     /protein_id="HYX53881.1"
                     /translation="MAAGAKPARKKRPDPINPETGLPYSKGTLKMRLLKRLKCTQKFE
                     KLAWAAGAKLIAGVDEVGRGSLFGPVVAGAVILPPEYRIKGLRDSKLLDEKTREKLAP
                     RIKEHAVAWAVAAVDVARIDQLNIYWASLLAMRRAIEQLSPAPDHLLLDAVRLDLECA
                     QTKIIHGDALSISIAAASIVAKVERDAMIRRWAPVYPEYDLASNKGYRSPKHIAALKE
                     FGPTPLHRLSFAPVWMCNVVTQEVLPFDDDEEAFEASLENL"
     gene            complement(10739..11095)
                     /locus_tag="VE783_10565"
     CDS             complement(10739..11095)
                     /locus_tag="VE783_10565"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53882.1"
                     /translation="MSPQVPGEAAPAELFEGGYYSIQDGEVFAVAKVLRLETEIVHVR
                     IYKQKFQQRPRAIDPAQLTLGTIHDTDGFGMGHLPLRMTTFKNSEPQFLTYAEVLTTE
                     LEGYNMWKEHGGGVWE"
     gene            complement(11218..11601)
                     /gene="rplS"
                     /locus_tag="VE783_10570"
     CDS             complement(11218..11601)
                     /gene="rplS"
                     /locus_tag="VE783_10570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005590628.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000311 - plastid large ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L19"
                     /protein_id="HYX53883.1"
                     /translation="MSQHPIMEKLAAKLQRKDIPAINAGDTVRVQVRIKEGDKERIQA
                     FEGTVISRSNGPTGSFTVRKMSFGTGVERIFPLNSKVIDKVEVIRQNQVRRAKLFYLR
                     GLRGKAARLREVDTRTHAAAPATAE"
     gene            complement(11686..12507)
                     /gene="trmD"
                     /locus_tag="VE783_10575"
     CDS             complement(11686..12507)
                     /gene="trmD"
                     /locus_tag="VE783_10575"
                     /EC_number="2.1.1.228"
                     /inference="COORDINATES: protein motif:HMM:TIGR00088.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0052906 - tRNA
                     (guanine(37)-N1)-methyltransferase activity [Evidence
                     IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (guanosine(37)-N1)-methyltransferase TrmD"
                     /protein_id="HYX53884.1"
                     /translation="MKFEIVTIFPDFFRGPLDYGIVRKAREAGLIEITVHDLREFTTD
                     KHRTVDDRPFGGGEGMVLKPEPLFKCAEALGVQPREERLSGSARETVVLLSPQGAMFN
                     QQLAQELAGLERIVMICGRYEGVDERVSEALADREISIGDYVLSGGELGAAVIVDTIT
                     RLIPGALGNEASAQQESFTAAQKAAAEGPDSTCGSGGLLDYPHYTRPAEFHGMAVPEV
                     LMGGNHDQIRKWRRRKSLEKTLRNRPDLLDREALSEADRKLLVELEVEFEKKGIR"
BASE COUNT         2704 a         3488 c         3636 g         2695 t
ORIGIN      
        1 gaactgtggt cacggcaaca atcccggcca gcagcagtgc cgatgacgca aaaatcgcgg
       61 tggctgtggg attgccggct gccttggccg cggaagaaaa aacagccgcg gtgaaagcca
      121 atgccagacc ggcgacggcc atcaggaagc gaagccatgc ttctgcatcg aggttggcca
      181 gaattgactt gactgggttc tgcatgcgcg gttttggctt taagtctggc acagcttgcg
      241 gattcaaggg gcgaaatctc ctgcacgaac ggaggtacac ctaaggaatg cgggatgaaa
      301 ccgggagttg cgcggagaaa ttcgtcttat aaggaaggcc gcaggtgaat cataaaatgg
      361 gggcctggaa ttgtttaagg gaggcaggat cggttctgtc gggcaaccag acaggagagg
      421 ccggattcaa acatttctga tatcgcctct gtcgcttctg tatttgcggg acgccgatca
      481 gatcgtcccg catttttttc ctccatagtt ctggatacaa aaatctatag cgaaataccg
      541 ttttctgtag ctttgttttt cccgaatcgg tacaatcttg taagctcaag cagctctatg
      601 ggttaagtat agcctgctcg gtttctctga tggcatccga tttgctccat cccgcatacg
      661 aacgtccctt taccggaaac gcgaagcaac ggatgcgtaa ggattcgata atccggattt
      721 ctgccatcgg gctggccctg gtgaccgccg ccgccgtggt ctttgctgtc attaacttcc
      781 agaaggaaaa ccagaatccc accccggacg atggcgcctg gtgggtggag cagagcgggg
      841 ccctcacagc caagagcgtt gtcccaggag ggccggcgga caaggcggga atcaagcagg
      901 gtgatcagct cctggccatc cgcgccgggg tgaacgagca agatcataaa gtagaaagct
      961 ttgcggcttt tcagcgccag ctctcgcgcg tgggagtgct gcggaccgcc acctatatcc
     1021 tgagccggca tggcgcgcac tttgaagctt cagtaattct ggcggcgacc gacaaatcac
     1081 ttttccttgg cttgcggttg atcgcgctga tttacctggg gattgggatg tatgtgttgt
     1141 tccgccgctg gacagcgccc aaatccacgc atttttacgt attctgcctg gtttcgtttg
     1201 ttctgtactc gttccactac accgggaagc tgaatacttt tgactggatc gtttactggg
     1261 caaacattgc ggccacgctg ctgcagcccg cgttgctgct ggactttgct gtgaccttcc
     1321 cggagaaacg ccggctgctg gtgaagcacc catcactgct aagcctggtt tatgttcccg
     1381 ccgcggcgct gatgatcctg caggtgacgg caatcaccga gtttgaggcc agtgagctgc
     1441 tgcgctggag cctggatcgc cggcagatga tttacttcac ggtgtacttc gttgtggccg
     1501 cggcgatcat gtgggacagc tatcgccgcg cgaacacgcc ggtcaagcag cagcagatga
     1561 agtggatctc tcgcggcacg gtgctggcca ttgcgcctta cactgcgttt tacgtactgc
     1621 cgtacatttt gggctttgtt cccacgccgc tgatgaaggt cagcgtgctc tcgctggtgt
     1681 tcctgccgct gacgttcgga tacgccatcg tgcgctatcg cctgatggac gtggacatcg
     1741 tgttcaagcg cggcgtggca tacacgctgg ccacggcagc gattgtcgga gcgtatttct
     1801 ttgtcatcgg gagtttggcg gagctggtcc atgcgcgact gcccaacgcc ggcaccgcgg
     1861 gcttgatcgc gggcatgatc atcacggccc ttctgtttga gccgttgaag aactggatcc
     1921 aggagcgcgt ggatcgattc ttctaccgca aacgctacga ctaccggcgc acgctggtgg
     1981 agttcgggcg cgagttgagt tcggagacgg acctcagcgc catgttgatc tcggtcattg
     2041 accggctctc gcgcacgctc ggcgtccagc gcatcgcaat ctttctggcc acaggcgagc
     2101 ccgagcaacc gttcgaaatg gtgaagtcat atggcatttc gtctggagct gcgggaccgc
     2161 tcgacctgag ttttcttgta gtggaccagc cggaacagta ccagggacat aagttttttg
     2221 acaacacgcg acgcgcgctc gcgcagaatg cgaccgctcg ggacacaatc gccaagctca
     2281 acctcaacta ttacatcccg tgcacggtgc agaacgatac catcgcggtg ctgggattgg
     2341 gcaagaccac atccggcgat ttcctctcca gcgaagacgt tgagctgctg gaaacgctgg
     2401 ccggttacat cggtatcgcc atccagaatg cgcggctgta cgcctcactg gagcagaagg
     2461 tagccgagta cgaaaggctg aaagacttca acgaaaacat cgtggagtcc atcagcgtgg
     2521 gcgtgctggc ggtggatctg gaagaccgcg ttgaatcgtg gaattcgcag atggaagtca
     2581 tgtacgcgct gccgcgctcg caggttcttg gcgagcggct gagcgaagtc ttccccgcaa
     2641 ccttcatgga agagttctac cgggtacgcc agaatccggg cgtgcacaat ctctataagt
     2701 tccggttgaa caccccggcg ggcgatacgc gcacggcgaa catagcgatt gcgccgctgg
     2761 taacacgcaa attcagcgtg atcggccggc tgatcattgt ggatgatatc acggaacgca
     2821 ttgatcttga atcgcagctc tcacaggcgg agaagctttc ttccatcggc ctgctggccg
     2881 ccggggtggc gcatgaagtg aatacgccac tcgcggtgat ctcaagctat gcgcagatgc
     2941 ttacgaagca gatcagtggc gatgccaagc taagcgcgct gctggaaaaa atcacgcggc
     3001 agaccttccg cgcgtcagag atcgtaaata acctgctgaa cttttcgcgt accagcgcga
     3061 cggagtttac agacgtgaac ctgaaccgca tcatctccga gacgctgacg ctgctggagc
     3121 accagttcaa gacgtcacgg atcaaagtgg aaaccgaact ctacgagaac ctgccgacca
     3181 ttcatggcaa tccgggcaaa ttgcagcagg tgttcctgaa ccttttcctg aacgcgaaag
     3241 atgcgatggc agggaatggc ggaacgctgc gcgtggccac cagcaacggc acatctgtgg
     3301 ttgtaagcgt gggcgataca ggcacgggca ttgcgccgga acatatcaat aagatttacg
     3361 accccttctt caccaccaag actgcgccgc gtgaagggca gtcgcgtggc accggcctgg
     3421 ggctttcggt gacgtatgga atcatccagg agcacgcagg caagatccgg gtggagagca
     3481 agcccgggac gcagaagggc actgtgtttc accttgaatt tccattgatt agaaaggctg
     3541 taaatgtctg aagctgctgt gctaagccga ccccctgcgc aaagttccgc gaccggctca
     3601 attctcatca ttgacgatga ggcagcaatc cgcgaatcgc tcgaaaccct gcttgagttt
     3661 gaaggctacg tggtgcattc tgcggaaacg ggtgaagagg gcctcagcaa gattggcgaa
     3721 catccttacg acctggtatt gctcgatttt gccttgcctg accgcaatgg cctggagatc
     3781 ctggcggaca ttcgcgatcg cgatccgcag cttgcggtga tcatgatcac cgcgtacggc
     3841 acggtggaca acgcggtgcg cgcaatccag agcggcgcca gcaattttat ccagaagccc
     3901 tgggacaatg agaaactgct ggccgatgtg cgtgctgctg tggccaggcg tcgtgcggaa
     3961 gagcagaacg aacagctcaa gcgcgcgctt aaggagcgct acaacttcga aaacatcgtg
     4021 ggcaagagcg atcccatgct gcgcatcttc gacctggtgg ggcaggtggc gcccagccgt
     4081 tccaccgtgt tgattcaggg tgagagcgga accggcaagg agctgatcgc gaaggcgatt
     4141 cacgcaaact cgccgcgcaa gaaccagccg ttcgttccgg taaacaccgg ttccatgccg
     4201 accgacctgc tggagtcgac tctcttcggg cacgtcaaag gcgcattcac cagcgcgatt
     4261 gcgtcgaaga aaggcctgtt tgaagttgcc gatggcggca cgattttcct ggatgaaatc
     4321 ggcagcatgg ggctggagac gcagtcgaag attctgcgcg tcctgcagga caagaaattc
     4381 atgcacctcg gcggagtgca tgagatccag gtggatgtgc gtgtgatcgc cgccaccaac
     4441 gtggatttaa agcacctggt gaaggagggc aagttccgcg aggacctttt ctatcgcttg
     4501 aacgtgatca ccattgatct gccgccgctg cgcagccgtg ctgtggatat tccgctcctg
     4561 gtgaaccact tcctgacttc gttctcccag gagaatggca aaccggcacg caagatttcg
     4621 ccggaagcgt tgcgacccct gatggattat ggctggcccg ggaacgtgcg cgagctggaa
     4681 aacgtgattg aacgcgcggt ggtgctttcc aacactcccg tgattgggat tgatctgcta
     4741 cccgatcata ttgtgggtcg cggagcggcg gaaaaaatgt ttgagcaccg gccggacgct
     4801 tcattgtttg agattgtgga agactgcgaa cgccgcctga ttgtagacat gctggagaaa
     4861 tgcaattgga accagacgga agccgcggag cgcttccaca ttccgctctc aacgctcaac
     4921 cagaaaatca agcgcctgag tattgaagtc aggcggaagg gcgcgcggga acagtagctt
     4981 ccatccgcac aaatctcctc tgccagatgc ggaagcccag cagcacgagc gtcatggcgt
     5041 aaaagccggt ggttggtttg taggttgtag ccagcatcgc cgctgcaaga gccagcggaa
     5101 atacggcgag ctgttgtccc attacgcgta cagttctggg atcatcttcg ttcagcattc
     5161 ctcgttttcg tgcaattgcc cattgggtcc agagaagggc ggaagcgaga aacatgttgc
     5221 cgaaataaat ttcctgcgcg gtgagattgc ggatgaaatg tccgagcagc gcgcaggaga
     5281 agggcagcac cgagatggtg agcaggaaca tgacgttcag ccagaccagc gccatcctga
     5341 catgccggac gaaatgcatt gccatgtgat gcaggatcca cagcacccca caatacagaa
     5401 aagagatgag aaagctaaag aaagccggca tctcttcgcc cagacggcga aggatttcct
     5461 gcgtagcagc ggtcttgggc aggtctggca ccttcaattc cagaacaagc agagtcatgg
     5521 caatggcgaa aatgccatct gtaagagcct caacgcgacc tttagagagc tgaacactgt
     5581 gaagaatgct gcggaccgaa acgggttggg gattcacgat gggctggatt ctaatgcgct
     5641 tctccgcttg aaacaacggt aaacggctcc tgcttttgag aggcaatgaa agcctctgtt
     5701 atattgacct tgggatggaa ctcatctcac caaccgatat cgtcaagcgg aacgtctcgt
     5761 ccgttcagga ctacgccgca ctttcctggc gctcgctgac caacgttttt gcgcgcccgc
     5821 tttacatggc ggatgccatt cagcaggcag attccatcgg cgttggcagc ctccccattg
     5881 ttgttcttac cggcatgttc acgggaatgg tgctggcgct gaactccgcg aatacgctgg
     5941 agcgattcgg ttcgctctca atgacgggac agttggtggc tatttccatg gtgcgcgagc
     6001 ttggcccggt gctcacgagc ctgatggtgg cgggacggaa cgcttccggc atggcgagcg
     6061 aactcggctc aatgaaggtg accgaacaga ttgacgccat gcgcgcgctg ggaacagatc
     6121 cttacaagaa gctggtgacc ccgcgcgtta tctccaccgt gtttatgatg ttctttctca
     6181 ccatcctttc cgatcttgtg ggcctggtgg gtggctatgt gatttctttt cttctgctgg
     6241 gtctggatac ctttcaatat tggaatacgg cataccagtc gctcacctac aatgatgttg
     6301 tcaccggcct ggtcaagccg atcttcttcg ggtttatcat tgcgaccgta ggttgctatt
     6361 acggcctgag caccaagggt ggaactcagg gcgttggccg cgcgaccacc caggcggtgg
     6421 tcgcagcgtc agtgctgatt cttgccgttg acgtggtgct cacgcagctt atgctgtcaa
     6481 tgaagtaaac atcatgggct caccactgga atttccgtcc gccgcaaagc ttgacaccat
     6541 ccacaaggcc atcatcttcg acaacgtatc actctgcttc gaagacctgg tactgcttga
     6601 tggcgtctca ttcgagctga agaaaggcga gaccaaggtc atgctcggag tggcggggtc
     6661 gggaaagagc acgatcctca agttgtgcct tggccttttg cgcccggatg atggccacat
     6721 ctatgttctg ggccacgatg ttaccgccat gaaggagcag gagctttttg atttgcgcag
     6781 caaagtcggc atcgtattcc aggagagcgc gctgtttgat tcactcaacg tgcgcgacaa
     6841 tgttgcgttc cggctgacgg aagagaaact tccgcaggat gaaatagaat cgcgcgtccg
     6901 cgaggcgctc cgctttgtgg aactggaaca ggcgattgag aagctgccgt ctgagctttc
     6961 cggcggcatg cggcggcgcg tgggcattgc ccgggccatt atcacccatc cggaaatcct
     7021 actgtacgat tcgccgaccg gcggtcttga cccgatcacc tcgaccacga tcatcgagtt
     7081 gatcatgaag cagcgcgatg ttgcaaaaac cagcgctctg ctggtgagcc atcgcctgca
     7141 ggatggtttc atgcttgcca gccactacta tgacccggta acgaacacga tgcgggcggt
     7201 ggatgggagg ccaatgcgcg acgtccacac cagcttcatg atcctgaaag atggcaaggt
     7261 gatttttgat ggaacggcgc acgatctggg tgagattcag gacccttata taaaggaata
     7321 catttcgtag cgaagccgag tgagtaggcg gcattgcgat caaccgctct atagccaccc
     7381 tctcgaacaa accaccggcc ctcatcagtg gagatgttta gactttaccg gggcttccat
     7441 gggcagctat gattcccgcc atgaaaagat cgttgctgct gctgctgctg ctttttgcgg
     7501 ggattactgc ttacggccag aacacactga accagcaggt ggactctgtt ttccctgacg
     7561 ccaaggctct ttacctggat cttcaccagc atcctgaact ttcagggcac gagacgcgga
     7621 ctgggggtct ggtcgcggaa aagctgcgcg cgctgggtta tgaggtaacc gagcacgtag
     7681 gtggaacggg agtggtcgcg atcatgaaga acgggcctgg gccaacggta atgctgcgga
     7741 ctgaacttga tgcgctgccc gtcacggaag aaacggggct gccttacgcg agcaaggcgc
     7801 acgccaaaga tgacaacggc cgcgatgtgg gagtgatgca tgcctgtggg catgacgttc
     7861 acatgtccag cctgatcggc acggccacga tcatggcgcg tagcaaagat ttatggcacg
     7921 gaacgctcga gttggttggc cagcccgcgg aagagacaat caccggcgct aagaagatgg
     7981 tggatgatgg ccttttcacc aggttcccgc ggccggatgt cggcgtggcg ttgcacgatg
     8041 aaaacggaat tgccactggt caggtgggaa tcactccggg ttatgcgaag gctgctgccg
     8101 attcgcttcg cataaccgtt tatggcaaag gcggccacgg tgcgcgtccg gaatcgacca
     8161 ttgatccagt cctgatcgcc gccagcattg ccgtgcggct gcaatcgatc atctcccgcg
     8221 agattcatcc cggtgatgcg gcagtaatca cggtcggtta tattcaggcg ggcaccaaga
     8281 acaacatcat cccgaatgaa gcacagatgg gactgaccgt gcgttcttat aagccggagg
     8341 ttcgccagca cctgcttgca gccattgagc gcgtggctaa agcagaagct atggccagtg
     8401 gcgccgacaa gatgccgctg gttgagaaat acgaatcaac ctccgcggtc tataacgatc
     8461 ctgtcctgac cgagcacttg gcagccgtgc ttgaatcagt ggttggcaag ggaaacgtga
     8521 ttaacgagcc gccgctcatg acctcagaag actgggcgat gttcgtggag caggggatcc
     8581 ccgggttcta ctacacgctg ggcgtggccg atccgcagaa gctgaaagag gcgcgtgctg
     8641 ccggaaagga gttgccttcg aaccattcac cgctgtttgc cccggtggtt gaccccgcgc
     8701 tgcacactgg gattgcaacg gaagttacgg tgctgcgcag cctgctgaaa ggcacgcctg
     8761 cggatgtgaa gaagattacg gagcagaaga gcggcggctt ttagcagctc ggcaaaccct
     8821 ttgcgttcaa gggcacgggt aaagctttcg gaacaaaatt tccatccgcc gagtcggatt
     8881 tcgggtacac tcctgctgga atcaccacag attggggtac cgaatccatg ggcaagagca
     8941 cggccggatt tgttctcgct gtctttctac tcttcagttc cttgctttca gcacaggcac
     9001 aaaacagttc ctgcaccgtg aacatgccgg tcgttctggt ggataagcag ggaaatctat
     9061 tgggtggggc cagcccaaaa gatctgacca ttgaggtcca caggcagaag ctcgcgatcg
     9121 agtctctgag ctatgacaca ggtccgcgcc gggtactttt catcgtggat acgggcaggc
     9181 acctgcccgc cgaagtccgg aagatggaat acacgttgat aacgcacctc atggaaacag
     9241 cgcggaccgg agacactttt ggtctactga ccacacgtgg cgcattgcgg caggtgcggt
     9301 tcgaggatgg aaatggtgct gttaacaggg ccgtgcttga gctctttgcg gatgcgagag
     9361 aggacaagaa agccggccca atgatggaca caatcgctga aggcctgacc tggtttggag
     9421 cgccccaacc gggtgatgcg atcctgctga tgagcgatca actcgtgcct tacgacacgc
     9481 tatcgcaatt gcgcggaggc tatgcagtag atgtgcggcc gctgaacgag agttcaaaga
     9541 cgaccttcaa gaagctcacg gagctgctgg ctttgcataa ggtgcgcgca ttcggtatcc
     9601 agttcagcgg cgtgctccac gacccgtaca cctatgaggc caccgatgaa aacctggcgg
     9661 gtctttgcat cgggagcggt ggatacgtca ttgtggatgc gatgactcct ttcggtggct
     9721 atcagttgac cagcgcacgg atcgacggtc ttcagaaaag ggtttaccag cttacaggtg
     9781 ccatcgccga gtattatgtc gcgaagctga aggcacctgc ggcggcagaa aaacagcagt
     9841 ggaggattga actagcgcgc gacctgcgga acaacaccta cgcgttatat ccaagatggg
     9901 tcggagcatg cgacaacgag tgatctccgc ggccaatccg ctgggtcctg cgttgatctt
     9961 cagaggtttt ccaatgacgc ttcaaatgct tcctcgtcat cgtcgaaggg aagcacttcc
    10021 tgtgttacca cattgcacat ccacaccggc gcaaatgaca gccggtgcag tggcgttggc
    10081 ccaaattcct tgagtgccgc aatgtgcttc ggcgagcggt accctttgtt cgaagcaaga
    10141 tcatactcgg gataaaccgg cgcccagcgg cggatcattg cgtcacgttc caccttggcc
    10201 acaatcgatg cggctgcaat cgagatggat agcgcatcac cgtggataat ctttgtctgc
    10261 gcgcactcaa ggtcaagccg caccgcatcc agcagcagat ggtcgggagc cggcgatagc
    10321 tgttcgattg cgcggcgcat cgccagcagg gaagcccagt aaatgttgag ctgatcgatt
    10381 cgcgcgacat ccaccgccgc aactgcccag gcaaccgcgt gttcctttat ccgcggcgca
    10441 agcttttccc gcgttttctc gtcgagcaat ttggagtcgc gcagcccctt aatgcgatat
    10501 tcgggcggaa gaattaccgc gccggccacc accggcccaa acagcgatcc ccgccccact
    10561 tcatccactc ccgcaatcag ctttgctccc gctgcccacg ccagcttctc aaatttctgt
    10621 gtgcacttga gccgcttgag caggcgcatc tttagcgtgc ctttcgagta aggtaggccc
    10681 gtctccggat taattggatc aggacgcttt ttgcgcgcgg gttttgcgcc ggccgccatt
    10741 attcccaaac acctccgccg tgctccttcc acatgttgta accttcgagt tcggtcgtca
    10801 gcacctccgc atatgttagg aattgcggct cactgttctt gaaagttgtc atacgcaaag
    10861 gtaaatggcc catgccaaac ccatctgtgt cgtggattgt gccaagcgtg agctgcgccg
    10921 gatcaatggc tcgcggacgc tgctggaact tctgcttgta gatcctcaca tgcacgatct
    10981 ccgtttcaag cctgagtacc tttgccacgg caaagacttc gccatcctgg attgagtagt
    11041 aaccgccttc aaataattct gcgggagctg cttcgccggg aacctgagga gacatagaga
    11101 ggtgaacgtg taaaaccatt atgcccgaaa tggagccgcg agcgtgtcgg cttcaacaaa
    11161 gcaacagacc cggagcggat tgcaccgggc ctgcaaccaa cagcaattct gagcgaacta
    11221 ctccgctgtg gccggagcgg cagcgtgggt gcgggtatcc acttcgcgca ggcgggcagc
    11281 cttgcctcgg agaccgcgaa ggtaaaacag ctttgctcgg cgcacctggt tctggcggat
    11341 cacttccacc ttgtcgatga ccttggaatt cagggggaag atgcgctcca cgccggtgcc
    11401 aaagctcatt ttgcggacgg taaagctgcc ggtcgggccg ttgctgcggg agatgaccgt
    11461 tccctcgaag gcctgaatgc gctctttatc gccttccttg atccttacct gcacgcggac
    11521 cgtgtcgccg gcattgatcg ctgggatgtc cttgcgctgc agttttgcag caagtttctc
    11581 cataatcggg tgctgtgaca taacgaaaaa cctctgatcg taactggtat ttggcacttg
    11641 gtattcgagc actcagcccc tggaatacca acttccaaat accaactacc gaataccttt
    11701 cttctcgaat tccacttcca attctactaa caatttccgg tccgcttcgc tcagtgcctc
    11761 acgatccagc aggtccgggc ggttccgcag cgtcttttcc agcgacttgc gcctgcgcca
    11821 cttcctgatc tggtcatggt tgccgcccat cagtacttcc ggtacagcca tgccgtgaaa
    11881 ctctgccggc cgcgtatagt gcggataatc cagcagtccg ccactcccgc aagtactgtc
    11941 cggcccttca gcagccgctt tctgtgctgc cgtaaaactt tcctgctggg cagatgcctc
    12001 attgcccagc gctccgggta tcagccgcgt aatcgtatcc acgataaccg ctgcgcccag
    12061 ctcgccaccg ctcagcacgt agtcgccaat cgaaatttca cgatcagcca gcgcttctga
    12121 aacgcgctcg tccacgcctt cataacgtcc gcagatcatc acgatccgct ccagcccggc
    12181 caactcctgc gccagttgct ggttgaacat ggcgccctgc ggcgaaagca gcaccacagt
    12241 ttcgcgcgcc gagccgctca accgttcttc tcgcggctgc acgccgagcg cttccgcgca
    12301 cttgaacagc ggttccggct taagcaccat gccttcacca ccgccgaagg gcctgtcatc
    12361 caccgtgcga tgcttgtcgg tggtgaactc gcggaggtcg tgcaccgtga tttcgatgag
    12421 cccggcctcg cgcgccttgc gcacaatgcc ataatccaga ggcccgcgaa agaagtccgg
    12481 aaaaatcgtg acgatctcga acttcatcgc gcggcctcaa tct
//
LOCUS       DASQYP010000325         2750 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_96616, whole genome shotgun sequence.
ACCESSION   DASQYP010000325 DASQYP010000000
VERSION     DASQYP010000325.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 2750)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2750)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2750
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_96616"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            84..989
                     /locus_tag="VE783_10580"
     CDS             84..989
                     /locus_tag="VE783_10580"
                     /EC_number="2.5.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012705.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004659 - prenyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0008299 - isoprenoid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phytoene/squalene synthase family protein"
                     /protein_id="HYX53885.1"
                     /translation="MTHHQLSHAYAVCRGIARREAKNFYYGFLVLPAEKRNAFCAVYA
                     FMRHADDISDDPALDHAQKRQKLGEWMEAARQVFAGRPTDDPVLMAVGDAQQKFKIPA
                     ELFEKLVYGTSIDLEIPPPTGGLPSALCNTFEDLKQYCYHVASIVGLVCIRIFGYEDS
                     KAEFLAEDCGLAFQLTNIVRDVKEDAGLGRIYFPREDLERFSLNEENFSPLKLADAAQ
                     AQALRPVLEYEADRARKYYESAKWLMELIHEDSRAALWVLVEIYSRLLKRISDRNYDV
                     FTERVRLSTWEKMSVLARGFWLRIA"
     gene            986..2377
                     /gene="hpnE"
                     /locus_tag="VE783_10585"
     CDS             986..2377
                     /gene="hpnE"
                     /locus_tag="VE783_10585"
                     /EC_number="1.17.8.1"
                     /inference="COORDINATES: protein motif:HMM:TIGR03467.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxysqualene dehydroxylase HpnE"
                     /protein_id="HYX53886.1"
                     /translation="MSSAGQDNVAVIGGGVAGLSAACALADAGLKVTLFERRPYVGGR
                     ASSYLHPGTEEVIDNSQHVLFGCCTNLIRFYEKLGVASKIRWFRAFNFIQPGGRLTTF
                     RPSAFLPAPLHSVPAFIRSPLFTPREKVAIGRAMSAMTKPLRNGADEDCLTWLRRHGQ
                     TEQAVRRFWEPVLFSALNEDLDKASIRYAIKVFRELFLNTATGGNMGVPNLPLSELYG
                     HAIEYIRARGGEVRLRQSVNQIGSTESAVNVTSESGQQKFDYAVIAAPYHTLASLLPS
                     DAAGNELRRRLEHFHSSPITAIHLWFDREVTPLPHAALLDRTIQWMYQKSKLQDREKN
                     SGSYVELVVSASKQLLDKSREEIIEMATREFAEFFPVANQAKLLKATVTKEVHATFSV
                     IPGLDEHRPGPQTGWPRVFLAGDWTATEWPATMEGAARSGYRAAEALTAALGKPREFL
                     VPDLPARGLMKGK"
     gene            complement(2382..>2750)
                     /locus_tag="VE783_10590"
     CDS             complement(2382..>2750)
                     /locus_tag="VE783_10590"
                     /inference="COORDINATES: protein motif:HMM:NF013088.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="EamA family transporter"
                     /protein_id="HYX53887.1"
                     /translation="RLWFAIGAVVLASSAGDVLLSKAMKRIGDLDELRSRRGLLAVIA
                     RVGSNKTFLVALGCLIFSFFALLTALSWGDASLVAPASASLTFICSAILAKYFLHEKV
                     DGRRWLAAALVCVGVALLAQ"
BASE COUNT          614 a          751 c          815 g          570 t
ORIGIN      
        1 tatgatgtgc tgtgcgaacg gccggtgatc tccaagtcgc gcaagctgct gctggtactg
       61 cgggcagcgg caggcaagct cttgtgacgc atcatcagct cagccatgct tatgccgttt
      121 gccgcggaat tgcgcgccgc gaagccaaaa atttctatta cggctttttg gtgctgccgg
      181 cagagaaacg caacgctttc tgcgcagttt acgcattcat gcggcatgcc gatgacatct
      241 ctgacgatcc ggcactggat cacgcgcaaa agcgacagaa acttggcgag tggatggaag
      301 ccgcacggca ggtgtttgcg gggcgtccaa cggatgatcc cgtgctgatg gccgtgggcg
      361 atgcgcagca aaaattcaag attccggccg aactgtttga aaagctcgtg tacgggacaa
      421 gtatcgatct cgaaatccct ccgccaaccg gaggactgcc gtcagcactg tgcaacactt
      481 tcgaagatct caaacaatat tgctatcacg tggcgtccat agtcgggctg gtttgtatcc
      541 ggatcttcgg gtacgaagat agtaaggccg agtttctcgc cgaagattgc gggctggcct
      601 ttcagttaac caacatcgta cgggatgtga aagaagatgc cggactgggc cggatttatt
      661 ttccgcgcga agacctggag cgtttcagcc tgaacgaaga gaatttttcg cctttgaaac
      721 tggctgatgc agcgcaggca caggcgctgc gtccggtgct ggagtacgaa gctgatcgcg
      781 cgcgcaagta ctacgaatcg gcaaaatggc tgatggaatt gatccacgaa gacagccgcg
      841 cagcgctgtg ggtcctggta gaaatataca gccgcctgct gaagaggatt tccgaccgta
      901 attatgacgt tttcacggaa cgcgtacgcc tgagtacatg ggagaaaatg tcagtcctgg
      961 cgcgcggatt ctggctgcgc atcgcatgag ctccgctggg caggataatg tagcagtgat
     1021 tggcggtgga gtggcgggcc tttccgcggc gtgcgcgctc gccgatgccg gactgaaagt
     1081 cacgttattc gagcgccggc cgtacgttgg tggtcgcgca tcttcttatc tgcatccggg
     1141 aaccgaagag gtcatcgaca actcccagca cgtgctgttc gggtgctgca ccaacctgat
     1201 tcgtttttac gaaaagcttg gggtagcatc taagatccgc tggttcaggg ccttcaattt
     1261 cattcaaccg ggcggacggc tgaccacatt tcgtccttca gcgttcctgc cggcgccgct
     1321 gcattcagtc ccggcgttca tacgatcccc gctgttcacc ccgcgagaga aagtcgcgat
     1381 cggccgggcg atgtccgcga tgaccaagcc tctgcgcaac ggggccgatg aagattgtct
     1441 cacctggctc cgcaggcatg gccagactga acaggcggtt cgacgcttct gggagccggt
     1501 gttgtttagc gcgctgaatg aagatcttga taaggcttcc attcgttatg cgattaaggt
     1561 gtttcgcgag ctctttctga acaccgcaac cggcggaaac atgggcgtgc caaatctccc
     1621 gctatcagaa ttgtacgggc atgcgatcga gtacattcgg gcgcgcggag gtgaggttcg
     1681 gctgcgtcag agcgtgaatc agatcggctc aactgaatct gctgtgaacg tcaccagcga
     1741 gtcggggcag cagaagtttg attatgctgt tatcgcggcc ccatatcaca ctctggcatc
     1801 tctcttgcct tccgatgcgg cgggaaatga gttgagacgc aggcttgagc atttccattc
     1861 gtcaccgatc actgcaattc atctctggtt cgatcgtgag gtcacgccac tgccacatgc
     1921 agcacttctc gatcgcacga ttcagtggat gtaccagaag tcgaaattgc aggaccgtga
     1981 gaaaaactcc gggagctatg tggaactggt ggtaagcgcc tcaaagcagc tcctggacaa
     2041 gtcccgcgaa gagatcattg agatggcgac gcgagagttc gccgagttct ttcctgtggc
     2101 gaaccaggct aaactgttga aagcgacggt gaccaaagaa gtccacgcaa cattttcagt
     2161 tatacccgga ttggatgagc atcgtcctgg gccgcagaca ggctggccgc gggtatttct
     2221 cgccggcgat tggacagcca cagaatggcc agccacgatg gaaggtgcgg cgcgaagtgg
     2281 ttatcgcgca gctgaagcgc ttacggccgc gctcggaaaa ccgagagagt ttcttgtgcc
     2341 cgatcttccc gcgcgagggt tgatgaaggg gaagtgaacg gtcactgcgc caatagggcc
     2401 acgcccacac aaaccagcgc agcggcaagc cagcgacggc catccacctt ctcatgcagg
     2461 aaatacttgg ccagaatcgc ggagcagata aacgtcagcg aggctgaagc cggcgccacc
     2521 aggctggcgt ctccccagga gagcgcagtc agcagcgcga aaaagctgaa aatcaggcat
     2581 ccgagcgcaa ccagaaaggt cttgttgctc ccaactcgcg caatcacggc caggagtccg
     2641 cgtcttgagc gcagctcgtc aagatctccg atgcgcttca tcgctttcga aagcagcaca
     2701 tcaccggcgc tcgatgccag caccacagca ccaatagcga accagagccg
//
LOCUS       DASQYP010000326         2040 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_96625, whole genome shotgun sequence.
ACCESSION   DASQYP010000326 DASQYP010000000
VERSION     DASQYP010000326.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 2040)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2040)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2040
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_96625"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..741
                     /locus_tag="VE783_10595"
     CDS             <1..741
                     /locus_tag="VE783_10595"
                     /inference="COORDINATES: protein motif:HMM:NF013618.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lytic transglycosylase domain-containing
                     protein"
                     /protein_id="HYX53888.1"
                     /translation="HLPSGYLDIPTADIASFDRDENPPLEAVPEQTTAAPAQNPTKPM
                     QNAVAPEPAAASPASPPNPAMTQADIEQVVREIASKHQLDPDFVASVIKAESDFKTRA
                     VSRKGAQGLMQLMPQTAAQLGLKDAFDPKANVEAGTAHLSALLDLYHDDAIKALAAYN
                     AGAHRVDQYNGVPPYKETQAYVAKIVRDFNAKKRAQMKAAAAAKLAAQKSQPSKTAAP
                     QVTPASATKRKSPAPKQRAAVSPSQNPA"
     gene            841..1938
                     /locus_tag="VE783_10600"
     CDS             841..1938
                     /locus_tag="VE783_10600"
                     /inference="COORDINATES: protein motif:HMM:NF015651.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lysylphosphatidylglycerol synthase transmembrane
                     domain-containing protein"
                     /protein_id="HYX53889.1"
                     /translation="MSKKKIIYTLVLVGLAALIYLQIRTWRKFDWQSFKEQTEGVNVV
                     LIAAGVAIIYFDYYLRAVRWKLLLKPMCKTESSKLLAPTMIGFTSMALLGRPGEFIRP
                     FLIARKENLTMSSQLAVWVVERLFDMGAFALIFAINLLFSSDQLQNLPGFMYGPAKRV
                     GHYNVSSYVFVELFGLFLLVGVLVGAFFAFRIRRNPDRAAGFIRRVFSPISEKFAHGL
                     STRVHTFGEGLNTVESFADFVQLFGLSVLLWLTIGGAYWCVTHAYADIGPDMTLSSCF
                     LLTGGSVAGGVLQLPVVGGGSQLATIGILVGVFDYPKELAISAGMMLWLVTFMSIIPT
                     GLVLTHFEHLSLRKLGEESKQEEEKVLEEQQ"
BASE COUNT          424 a          632 c          558 g          426 t
ORIGIN      
        1 cacctgccga gcggctatct ggacatcccg accgcagata ttgcctcttt cgatcgcgac
       61 gaaaatccgc cacttgaggc tgttcccgag cagaccactg ctgctcccgc gcagaacccg
      121 accaaaccaa tgcagaacgc agtcgcgccc gaaccggccg ctgcgtcacc tgcgtctccg
      181 ccaaaccccg cgatgacaca ggccgatatt gagcaggtgg tccgggaaat cgcgagcaag
      241 caccagctcg accctgattt tgtggccagc gtcatcaagg cagaaagcga cttcaagacc
      301 cgagccgtct cgcgcaaagg cgcgcaaggc ttgatgcagc tcatgcccca gactgcagcg
      361 cagctcggcc tgaaagatgc gttcgatccg aaagcgaatg tggaggccgg caccgcacac
      421 ctgagcgcgc tgctcgacct ctatcacgat gacgcgatta aagcgctcgc cgcttacaac
      481 gcgggggccc accgcgttga ccagtataac ggcgtgccgc cctacaaaga gactcaggcc
      541 tatgttgcca agattgtgcg cgatttcaac gccaagaagc gcgcgcagat gaaggccgcc
      601 gcggcggcga agctggcagc tcagaaatcg cagccttcca agactgctgc gccgcaagtt
      661 accccggcaa gcgcgaccaa aagaaagagt cctgcgccca agcagcgcgc cgcagtctct
      721 ccctcgcaga atcccgcctg agcgtccatt acgtcgaata cctaaagcgt ccattacaat
      781 gatcagttcc ttcacgctga ttgaggagag ttctgcgccc ggagcccgca ctctgactgc
      841 atgagcaaaa aaaagatcat ctacacgctg gtgctggttg ggctcgcagc gctcatttat
      901 ctgcagatca gaacgtggcg caagttcgac tggcaatcgt tcaaagagca gacggagggc
      961 gttaacgtcg tcctgattgc cgccggcgta gctatcattt atttcgatta ctacctgcgc
     1021 gcggtgcgct ggaagctgct gctcaagccc atgtgcaaga ccgagagctc gaaactgctg
     1081 gcgcccacca tgatcggctt tacatccatg gcgctgctgg gcagacccgg tgagttcatc
     1141 cggcccttcc tgattgcgcg caaggaaaat ctaaccatgt catcgcagct cgccgtctgg
     1201 gtggtggagc gcctgtttga tatgggcgca ttcgcgctga tcttcgctat taacttgctc
     1261 ttctcttccg accaactgca aaacctgccc ggcttcatgt atgggcccgc caaacgcgtg
     1321 gggcactaca acgtatcgtc gtatgtcttc gttgaactct tcgggctgtt cctactggtt
     1381 ggggtcctgg tgggcgcatt cttcgcattt cgaatccgcc gcaatcccga ccgcgcagct
     1441 ggcttcatcc gccgtgtgtt cagtccaatc tctgagaagt ttgcccacgg cctgagcacc
     1501 cgcgtgcaca cctttggcga aggcctgaat acggttgaga gctttgccga tttcgttcag
     1561 cttttcggac tctccgtgct tctatggctt accatcggcg gcgcctactg gtgcgtgacc
     1621 cacgcatacg ccgacatcgg cccagacatg acgctctcca gctgcttcct tctcacgggc
     1681 ggaagcgttg ccgggggcgt gctgcaactg ccggtggtcg gcggcggttc acagctcgcg
     1741 accatcggca tcctggtcgg ggttttcgat tatcccaaag agcttgccat cagcgccggg
     1801 atgatgctct ggctggtgac ttttatgtcc atcattccta ccgggctggt gctcacccac
     1861 ttcgagcatc tctcactgcg taagttgggc gaggagagta agcaggaaga agagaaggtg
     1921 ctggaagagc agcagtagcc ccgatttcgc caacagaaat cctgcctgtt acaatcataa
     1981 gtaccgtatc tccaacaaag agctctgttt agcacccatg aaatgtcctt tttgcgggtt
//
LOCUS       DASQYP010000327         5056 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_269289, whole genome shotgun sequence.
ACCESSION   DASQYP010000327 DASQYP010000000
VERSION     DASQYP010000327.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 5056)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5056)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5056
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_269289"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(130..507)
                     /locus_tag="VE783_10605"
     CDS             complement(130..507)
                     /locus_tag="VE783_10605"
                     /inference="COORDINATES: protein motif:HMM:NF033788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metalloregulator ArsR/SmtB family transcription
                     factor"
                     /protein_id="HYX53890.1"
                     /translation="MSTPLTDTMLHVVARRFRLLGEPMRLRILQLLRPGALSVNSIVE
                     QLGTSQPNVSKHLQALAQGGLIRRRRDGLNTFYAIADPTIFSLCDLVCHSATQQTRAL
                     LEGMRGIPVPTKKRGRQTPAFTR"
     gene            complement(685..1287)
                     /locus_tag="VE783_10610"
     CDS             complement(685..1287)
                     /locus_tag="VE783_10610"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53891.1"
                     /translation="MPNGGPDNCGGCGFNRANSGVWPGPGEENLAPGFCSIRGFEIAN
                     PLWTYCKNQHTREGVPFGPIYTAVYINGYQRVPCFYGYIPTDGSGECMVCGDHADFGI
                     GLTIGENTLRFCGCEHYLIWWTDELKGRLEGFKKAGEKAYDDMYEARSSSDATALYSD
                     AKESFYGAIAAAKQLEWTDEAAALEKRLHHIKDVFRSQFT"
     gene            complement(1459..3921)
                     /locus_tag="VE783_10615"
     CDS             complement(1459..3921)
                     /locus_tag="VE783_10615"
                     /inference="COORDINATES: protein motif:HMM:TIGR03434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HYX53892.1"
                     /translation="MQTLFHDLRYGLRILARNPGFSLATVLCLTLGIGATTAIFSVVN
                     AVLLRPLPYVQPQRLVKVYSEFTRFPGGGLRRFWVSPPEFLDLRQEMKSWESLDAWVN
                     GGVNLSGEAQPLRATASFVSGGLLKSLGVQPLLGRMITPEDDDPKAMVVADLSYSLWQ
                     RVFGGRRDIIGKEMLLNGQKAVIIGVMPAGFAFPPGEVDPPEVWTPLQIDPAKPGGRG
                     SHFLYLLGRLKPNVTPQQAQAEFESLVKYWGETGSDKQHHFGPDFHTIVSYPFQGEIV
                     SNVRPALLMLLGAVCFVLLIACVNVANLLLARAEARQREIAVRTAIGASSWRLLRQFV
                     AEGILLSLIGAVLGLGLAFAGLYTIKLTNAGSIPRAAEIRIDGTVLLVTLAVSILTGV
                     VFGLAPLMHLAVQNVHGLLKEVAGGASSGSAAAQNFRRGLVAFEIGSAMLLLICCGLM
                     VRAFWKLQEVDIGLNPHGVTTMRVTLPSAEYKEDAKIESLWTRLQERVTHLPGVQSAA
                     LVSGLPPQRRVNANDTEIEGFVPRKDGPIQNVDFYQSVSESYFQTMGIRLMEGRLFTA
                     SDAGGAAPVVIVNQTMARTFWGNESPIGHRVRPSGNSNDWATVVGVVADVKNAGVDKP
                     TGTEIYLPYRQPYGGGRQGMYVVLRGKSQSLDLASTVRRELRDLDPSLPVSSVISMDE
                     VLSSAQSRPRFLTLLLTIFSSVAVALALVGIYGVLSYLVARRSKEFGLRMALGAPRQH
                     VLGLVLKQGALLAGVGVVFGLAVALAVTRLMSSLLYGVRAIDPLTFLLMPIVLALVAL
                     LASYLPARRATKVDPLVALRYE"
     gene            complement(4178..4675)
                     /locus_tag="VE783_10620"
     CDS             complement(4178..4675)
                     /locus_tag="VE783_10620"
                     /inference="COORDINATES: protein motif:HMM:NF039957.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6010 family protein"
                     /protein_id="HYX53893.1"
                     /translation="MSQGYSMLGFVVVVIEYATIGFLAAAGSVFVSRKFLGPKAEQIF
                     YAMFLIMVAGFYLAFTAYFGAATAWRMEVTAVVVFAAFGLAGTRVPLALVLGYPLHGL
                     WDMVHEFQAHGIQSFFEPSQLTAIPLAYGFFCLVYDLCIAGYAYMRRADWSAAWKTRS
                     RGAAV"
     gene            4917..5039
                     /locus_tag="VE783_10625"
     CDS             4917..5039
                     /locus_tag="VE783_10625"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53894.1"
                     /translation="MNGDLQICPSTGYVVAVLSNLDPPAATHVLEFIMNRLPHQ"
BASE COUNT         1086 a         1589 c         1374 g         1007 t
ORIGIN      
        1 gcaccacctg cactcccgtg actacctcca gagtgctggc ggcaacgtgg cgctcagcgc
       61 tgcatccggt gagggcgatc agggccgcaa aataaagcgc gatctggccg gcatggatgc
      121 gcatttggtt tacctcgtga aagcgggcgt ctgccgccct cttttttttg ttggcacggg
      181 aatgccccgc attccttcaa gaagcgcccg ggtttgctgg gtggcgctat ggcagacaag
      241 gtcacagagg ctgaagatcg tgggatcagc gatggcgtaa aaagtattca gcccgtctct
      301 ccggcggcgg atcaggcctc cctgcgcaag cgcctgcaga tgcttggata cattaggctg
      361 gctggtacca agctgctcga caatgctgtt gactgaaagc gcgcctggcc ggagcagttg
      421 cagaatgcga agtcgcatgg gttcgccgag caggcgaaaa cggcgagcga caacgtgcag
      481 catggtgtcg gtgagaggtg tgctcataca tgactatata actctatagg catattattg
      541 tcaagcgaga gatttcggcg ccttgcgtac tgctcagggg ctggatgcct ttccatcctc
      601 gcggaaggct caatccgatc aatcaaccgt gggatcgctc gccatcgctt gagcgggttg
      661 caattcgccg actttcagag cctctcacgt gaactggctc cggaacacgt ctttgatgtg
      721 atgcagtctc ttctccagcg ctgcggcttc gtcggtccac tcgagctgct ttgctgccgc
      781 gatcgcgcca taaaacgatt ctttggcgtc gctgtagagc gccgtagcgt cagaggaact
      841 gcgcgcctcg tacatgtcgt catacgcctt ctctccggcc ttcttgaatc cttcaagccg
      901 gcccttcaac tcgtcggtcc accagatcag gtagtgctcg caaccgcaga accggagagt
      961 gttttcgcca atagtcagcc cgataccgaa atccgcatgg tcgccgcaca ccatgcactc
     1021 accgctgccg tcagtcggaa tgtagccgta gaagcaggga actcgctggt agccgttgat
     1081 gtagaccgcc gtgtagatcg gcccgaaagg cacgccctcg cgcgtgtgct ggtttttgca
     1141 gtaggtccag agcggattgg caatctcaaa tccgcgaatg gagcagaacc ccggcgcaag
     1201 attctcttca cccggcccag gccatacgcc actgttcgcg cgattgaaac cgcagcctcc
     1261 gcagttgtcc ggaccaccgt tcggcatgcg tacctgcctt tattcaggaa tatgcctcaa
     1321 cggtagctga tgtgcgcggc gcagccaagc ggaaaaacgt tgcgagaagc cgttatcctg
     1381 cagggaacaa tcactaaaga ccaagcgccc gttaccagtt gccaaatgcc gattgaagtt
     1441 ccgatgatcc cgctttcgtc actcatatct caacgccacc agcggatcca ccttggtcgc
     1501 gcgtctagcg ggaaggtagc tggcaagcaa tgccaccagc gccagcacaa tgggcatcag
     1561 cagaaacgtc agcgggtcta tcgccctcac gccgtagagc aggctcgaca tcaatcgtgt
     1621 aaccgccaac gccaccgcca gcccaaacac cacgcccact ccggccagca gcgctccctg
     1681 cttcagcacc aggccgagca catgctggcg tggagcgccc agtgccatcc tcaggccaaa
     1741 ctctttgctg cggcgcgcta ccagataaga aagcacgccg tagattccta cgagtgccag
     1801 tgccactgcg acggacgaga atattgtcag cagcagcgtc aggaaccgtg gccgcgattg
     1861 cgcgctggaa agcacttcgt ccatgctgat cacgctcgaa accggcaggc tgggatccag
     1921 gtcacgcaat tcgcgccgca ccgtgcttgc cagatcgaga gattggctct tgccccgcaa
     1981 gactacatac attccctgtc tcccgccgcc gtaaggctgg cgatagggca ggtagatttc
     2041 cgtccccgtg ggtttgtcca cacctgcatt ttttacgtcg gctaccacgc ccaccacggt
     2101 tgcccagtca ttggagtttc cgctgggccg cactcgatgg ccgatcgggc tctcgttgcc
     2161 ccagaaggtg cgcgccatcg tctggttcac aatcaccacg ggtgcggctc cgcccgcgtc
     2221 cgacgcggtg aatagccggc cttccatcag ccggataccc atggtctgga agtagctctc
     2281 actcactgac tggtagaaat ccacgttctg gatcggccca tccttgcgcg gcacaaagcc
     2341 ttcaatctcc gtgtcattgg cattcacgcg ccgttgcggc ggcaggcctg aaaccagggc
     2401 cgccgactgc actccgggca gatgcgtgac tcgctcttgc aaccgtgtcc aaaggctctc
     2461 aatcttggcg tcctctttat actccgcgct cggcagcgtc acgcgcattg tggtcacgcc
     2521 atgcgggttc aatccaatat ctacttcctg cagcttccag aacgcccgca ccatcagccc
     2581 gcagcagatg agcagcagca ttgcgctgcc gatctcaaac gccactaacc cacggcggaa
     2641 gttctgcgcc gccgccgatc ctgaactcgc gccgccggca acttccttga gcagaccgtg
     2701 cacgttctgc actgccagat gcatgagtgg cgccagcccg aaaacaactc cggtgagaat
     2761 cgaaactgcc agcgtcacca gcagcacggt cccgtcaatt cgaatctctg ccgctcgcgg
     2821 aatgctcccg gcattggtca gcttaatcgt gtaaagcccc gcgaacgcca gccccagccc
     2881 aagaactgct ccgatcaacg acagcaaaat gccttcggca acaaactgcc tcagcaagcg
     2941 ccatgaagaa gcgccgatcg cagtccgtac cgcgatctca cgctgccgcg cctccgcccg
     3001 tgccagcagc aggttcgcaa cgttcacgca tgcaatcagc aacacaaaac acaccgctcc
     3061 cagcagcatc agcagcgcgg gtcgcacgtt gcttacaatc tccccctgaa acgggtagct
     3121 cacaatcgtg tggaaatccg gcccgaagtg gtgttgtttg tccgaaccgg tctcgcccca
     3181 gtacttcacc agcgactcaa attccgcctg cgcctgctgt ggcgtaacgt tcggcttcaa
     3241 cctgcccagg agataaagga agtgcgaccc gcgcccgccc ggctttgccg gatcgatctg
     3301 caatggcgtc cagacttccg gtggatcgac ttctcctggc ggaaaagcaa aacccgccgg
     3361 catcacgcca atgatcacgg ccttctggcc gttcagcagc atctccttac cgatgatgtc
     3421 gcgccgcccg ccaaagacgc gttgccacag gctgtaagaa agatcagcca caaccatggc
     3481 tttaggatcg tcatcttccg gcgtgatcat cctgcctagc aatggttgaa ctccaagcga
     3541 cttcagcaag ccgccgctga caaatgacgc ggtggcccgc agcggctgcg cttcaccgct
     3601 caggttcacg ccgccattca cccatgcgtc cagtgattcc caggacttca tctcctgacg
     3661 caggtccaaa aactccggtg gcgagaccca gaaacgtctc agacctccac cgggaaatct
     3721 ggtgaactcc gaatacacct tcaccaatcg ttgcggctgg acgtaaggca agggccgcag
     3781 aagcactgcg ttcaccacac tgaagattgc ggttgtggcg ccaatgccca gcgtcaggca
     3841 gagcactgtt gccaggctga agccgggatt tcgggccaga atgcgcagcc catagcggag
     3901 gtcatgaaac agagtctgca tggagtccct tatctggcta gggttggact tggctgtccg
     3961 tgcgcagttc gcacgtaatg gtgattacgt ggtggaaaga aaaaggttcc agggaatctc
     4021 agcggctcaa gtcaaagtcg gggttgcgcg ctaagtcatg tcggctctga tatgaagata
     4081 tgtcgcgcct gcgaccgtca aagctggctg aaacgtctgt tgttatttgg aataaatatc
     4141 aatcgagatg tgattttccc gtctaccttg ccagcgccta aaccgccgcg ccacgcgacc
     4201 gcgtcttcca cgccgcactc cagtcggctc gtcgcatgta ggcatagccg gcgatgcaga
     4261 ggtcgtaaac caggcagaaa aatccatagg ccagagggat ggcggtgagc tggctgggtt
     4321 caaagaaaga ctgaattcca tgcgcctgga attcgtgaac catgtcccac aacccatgca
     4381 gcggatatcc caacacgagg gccaggggga cgcgcgttcc cgccaggccg aatgcagcga
     4441 aaactacgac ggcggtcact tccatccgcc atgccgttgc cgctccgaaa taggccgtga
     4501 acgccagata gaagccagcc accataatga ggaacatcgc gtaaaaaatc tgctctgcct
     4561 tgggcccgag gaacttgcgc gacacgaaaa cgctcccggc cgccgccagg aacccaatgg
     4621 ttgcgtactc gatcacgacc accacaaacc ccagcatgct gtaaccttgg ctcattcggt
     4681 ctgtctcctg ctcttcagtt tttcgcgcga gagtggacac tcttcgccgc cgcatccttt
     4741 ttcctgaaac aaaggctact gcgctattgg ctggtatcca cgaaaagttt tatttctcag
     4801 gcagtagtgt atcgtctgga acggaagcgc gaaatgagag tcgccaggcg tacggttttg
     4861 gcgggaccaa tgacaacggt gtgcgttgct tcggacatag ctgtggagcg cccggcatga
     4921 acggcgatct tcaaatctgt ccttccaccg gctacgttgt cgccgtgctc tcaaatcttg
     4981 atccgccggc ggcgactcac gtcttggaat tcatcatgaa ccggctgccg catcagtgat
     5041 gacgctgaaa aatatc
//
LOCUS       DASQYP010000328         5430 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_122345, whole genome shotgun sequence.
ACCESSION   DASQYP010000328 DASQYP010000000
VERSION     DASQYP010000328.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 5430)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5430)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5430
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_122345"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..623)
                     /locus_tag="VE783_10630"
     CDS             complement(<1..623)
                     /locus_tag="VE783_10630"
                     /inference="COORDINATES: protein motif:HMM:NF012334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HYX53895.1"
                     /translation="MKLQGKVAVITGASMGIGEAIAQLFLQEGAKVVLCARDLARTQA
                     TAQRIGGTAANTLALACDVSKREQVQQMVQSVVAKFGRVDILVNNAGFGLNDSVENLD
                     IGQLRQMFDTNYFGVMECMQAVIPIMRRQGSGDIVNVSSVSGHIAVPYMSGYGASKHA
                     LQALGMVSRMELARHGINVLTVCPGYIATDFAKNMLKGSNPERVGASV"
     gene            705..1307
                     /locus_tag="VE783_10635"
     CDS             705..1307
                     /locus_tag="VE783_10635"
                     /inference="COORDINATES: protein motif:HMM:NF014269.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LON peptidase substrate-binding
                     domain-containing protein"
                     /protein_id="HYX53896.1"
                     /translation="MSLLPLFPLDLVLFPGAPLPLHIFEPRYKEMIAECLQQKKPFGM
                     VRAKENAVAEVGCTASIIDVSKQYEDGRLDINTEGKQRFAIVSLNHDRSFLQAEVTWF
                     EDEEPLSATGDLTTALELHEELLTILGQAADIDAEQPPVSFQLANELPVDLDFKQAIL
                     EMKSEAERLQTLIEYYRATIPRVGKTMRAREKARGNGHVH"
     gene            1719..3215
                     /locus_tag="VE783_10640"
     CDS             1719..3215
                     /locus_tag="VE783_10640"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53897.1"
                     /translation="MNLPHTLGELRKSVFSEQRLRTRRTKDELRENLIARIRSGETIF
                     PGIIGYEDTVVPQLINAVLSRHNFILLGLRGQAKSRILRALTALLDPQMPYIAGCEIH
                     DNPYAPICRRCRELLAEKGDSTPIAWLTSEDRYVEKLATPDVTIADLIGDIDPIKAAR
                     GGHELGSEFTVHYGLLPRANRGIFAINELPDLAGKIQVGLFNIMQEGDVQIKGYPLRL
                     PLDVALVFSANPEDYTARGKIVTPLKDRIGSEIRTHYPSSLEEGISITEQEAWARRDG
                     LELHVPKYVREVVERIAFLAREDKKIDKRSGVSQRLPISVLENVVSNAERRALRNGEQ
                     WIVPRIGDIYAALPSITGKLELEYEGEMRGADIVARELIRVAVAKTYDSYFKDLNMQQ
                     VVQWFELGGEIKLADTAGAKEVLAGLENIQGLTEKLSPVGIKSKERPEVLVSAAEFVL
                     EGLHAHRRIGRTEERLFQADKSAKRTERPYEHEDEERQQRFRNRRPYN"
     gene            3469..4212
                     /locus_tag="VE783_10645"
     CDS             3469..4212
                     /locus_tag="VE783_10645"
                     /inference="COORDINATES: protein motif:HMM:NF013866.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005576 - extracellular region [Evidence
                     IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PHB depolymerase family esterase"
                     /protein_id="HYX53898.1"
                     /translation="MKSTIKNVFFIFLLTFTSAAALATAKPEKQSLVFEGTERAYYVS
                     VPEKLTLPAPLLVLLHGSGRDGMSQIEQWQALAEKEGLVLVAPNSLNSREWSMGVDGP
                     GFLHKIVEAVLGKYSIDGRRIYLFGHSAGAVFALYMGVMESQYFASVAVHAGALGEDF
                     YPYLDLAKRKLPIAIWVGTEDPYFSVAMVHKTQSELKNHGFDTQVFEMKGHNHDYYAV
                     AKELNPAIWKFLSSSRLDAEAKWQEYQKR"
     gene            4255..>5430
                     /locus_tag="VE783_10650"
     CDS             4255..>5430
                     /locus_tag="VE783_10650"
                     /inference="COORDINATES: protein motif:HMM:NF024909.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VWA domain-containing protein"
                     /protein_id="HYX53899.1"
                     /translation="MKYTKYSKYVGDLADEMSMEDLLNALSDYMLESGFNSQYMSFQQ
                     MDEHSLDALRQAIQQALEAGDFMDESMRERLEQMQMEGQLDELIEKLIDRMQQEDYIS
                     VDQPHDPSRPSTTPGQTGESQAEARFEITDKSLDFLGFKTLRDLLGSLGRSSFGRHDT
                     RDMATGIEASGATKPYEFGDTLNLDITETLSNAIQREGLHLPLNIEYSDLQVHQCEYQ
                     SSCATVVMLDCSHSMILYGEDRFTPAKKVAMALSHLIRTQYPGDSLSLVLFHDSAEEM
                     PISQLARVKVGPYYTNTREGLRLAQRILQRQKKDMKQIIMITDGKPSALTLEDGRIYK
                     NAFGLDPLVVSQTLEEVSKCKRAGVMINTFMLASDYGLVQFVQKVTEMCRGKAYFTTP
                     "
BASE COUNT         1221 a         1627 c         1473 g         1109 t
ORIGIN      
        1 accgaagcgc ccacgcgttc cggattgctg cccttgagca tattcttcgc aaagtcggta
       61 gcaatatagc ccgggcagac cgtgagcacg ttaatcccgt gcctcgccag ttccatccgc
      121 gaaaccattc ccagtgcctg cagagcgtgc ttgctggccc catagccgga catatatggc
      181 accgcaatgt ggccggaaac cgacgagacg ttcacaatgt cgccacttcc ctgccgccgc
      241 atgatcggaa ttaccgcctg catgcactcc attactccga agtaattcgt gtcgaacatc
      301 tgcctgagct ggccgatgtc cagattctcc accgaatcgt tcaggccaaa gccggcgttg
      361 ttcaccagaa tgtccacgcg gccgaatttc gccaccacgg attggaccat ctgctggacc
      421 tgctcgcgct tgctcacgtc gcaggcgagg gccagcgtgt tcgctgccgt gccgccgatc
      481 cgctgggcag tggcttgcgt gcgcgccaga tcacgtgcgc aaagcacaac cttggcgcct
      541 tcttgcaaaa acaattgcgc gatcgcctcg ccaatgccca tcgaagcgcc ggtaatgaca
      601 gctactttgc cctgaagttt catgctggaa gtttttagcc gtgccgcccc ggcaagtcaa
      661 gctgctgaac cgctccgcag tttttcgggt tgtaaaatat ccgcgtgagc cttctcccgc
      721 tctttccgct cgatctcgtc ctctttcccg gagcgccgct gcctctgcac atctttgagc
      781 cgcgttacaa agagatgatc gccgagtgcc tgcagcagaa gaagcccttt ggaatggtcc
      841 gtgccaaaga gaacgccgtc gcggaagtcg gatgcaccgc cagcatcatt gatgtttcaa
      901 agcaatatga agacggccgc ctcgacatca ataccgaagg caagcagcgt ttcgccatcg
      961 tctccctgaa tcacgaccgc tcattccttc aggccgaggt cacctggttt gaagacgaag
     1021 agcccctcag cgcgacaggc gacctgacca ccgcccttga actacacgaa gagctgctca
     1081 ccattctcgg ccaggccgcc gacatcgacg ctgaacagcc tcctgtttcg ttccagctcg
     1141 ccaacgaact gccggtcgat ctcgatttca agcaggccat tctggaaatg aagtcggaag
     1201 ccgagcgttt gcagaccttg atcgagtact atcgtgccac cattccccgt gtaggaaaga
     1261 ccatgcgtgc tcgggagaaa gcccgcggaa acgggcatgt gcattaaaaa gcttcgcgtc
     1321 aaacgctttc gtagcacagg cgccctcgcc tgtgccgcaa caatgtcaat ctgccgccgc
     1381 atattgccga accttgaaag agacggcggt tcgtacttca acacgttgag aaatctacac
     1441 cgtcgttcca ccacatcgct cagattcccc ggcatgctcc tttcctacac ggttcgatgt
     1501 ccggctcgcg ataaacgtgt caactatgtg cccggtctaa gctgtcaacc atctgcccgg
     1561 tttgtatcag caaccggcac aggcgagggt gcctgtgcta caaggcgtgt tcctatttac
     1621 tagtcttcag tcaaatttcg catcccggac cgcaccgcgg ctcatccaag agcaagttca
     1681 tttcaagcgt ataatcacca ctagagggcc ctaccttcat gaatcttccg cacaccctgg
     1741 gcgaactcag gaagtccgtt ttttctgaac agagactccg cacacgcagg acaaaggacg
     1801 aactgcggga aaatctcatt gcgcgcatcc gttccggcga gaccattttt cccggcatca
     1861 tcggttatga agacacggtg gttccgcagc tgattaacgc cgtactctcc cgtcacaact
     1921 tcatcctgct gggactgcgt ggccaggcca agagccgcat cttgcgcgcg ttgaccgccc
     1981 tgctcgaccc gcagatgcct tacatcgccg gctgcgagat tcatgacaat ccttacgcgc
     2041 ccatctgccg ccgctgccgt gaactgctgg cagaaaaagg tgactccacg cccatagcat
     2101 ggctcacgtc agaagatcgc tacgtggaaa agctggccac acctgacgtg accattgccg
     2161 acctgatcgg cgacattgat ccgatcaaag ccgctcgcgg cggccacgag cttggcagcg
     2221 aattcacagt gcattacggc cttcttcccc gcgccaaccg cggcatcttc gccattaacg
     2281 aacttccgga tcttgccggc aagattcaag tcggcctctt caacatcatg caggaaggtg
     2341 acgtccagat taagggctac ccgctgcgcc tgccgctcga cgtggctttg gtcttcagcg
     2401 ccaacccgga agactatacc gctaggggaa agatcgtaac gccgctcaag gaccgcatcg
     2461 gatcggaaat tcgcacgcac tatcccagct ctctggaaga aggcatcagc atcactgaac
     2521 aggaagcctg ggcgcggcgc gacggcctgg agctacacgt cccgaaatat gttcgcgaag
     2581 tggtggagcg cattgccttc cttgcccgcg aagacaagaa gatcgacaag cgctccggcg
     2641 tcagccagcg gcttcccatc agcgtgcttg agaacgtcgt ctccaatgcc gagcgccggg
     2701 ccctgcgcaa cggtgagcag tggatcgtgc cgcgcattgg cgatatctat gccgcgctcc
     2761 cgtccatcac cggcaagctg gaacttgaat acgaaggcga gatgcgcggc gctgatattg
     2821 ttgcccgtga gctgatccgt gttgctgttg ccaagaccta cgactcctac ttcaaagatc
     2881 tgaacatgca gcaggtggtg cagtggttcg aactcggcgg cgaaatcaag ctggccgata
     2941 ctgccggcgc gaaagaagtg cttgccggcc tcgaaaacat tcagggactt actgagaagc
     3001 tttctccggt cggcatcaaa agtaaagaac gtccggaagt gctggtgtcg gcagcggagt
     3061 tcgtgctgga aggcttgcac gcccatcgcc ggatcgggcg tactgaagag cgcctgttcc
     3121 aggccgataa gtccgccaag cgtactgaac gtccttacga gcacgaagac gaggagcgtc
     3181 agcagcgctt caggaaccgg cggccgtata actagcggcg ctttcgccgc tcgggctggt
     3241 tgctgtaatc ccgagccaaa ggcgagggaa ccctatcacc ttctcaagag ttggccttta
     3301 gagacagcga agcaactgtg ccatcaaatg gcagcccgat gctggaaggg cgcggagagc
     3361 caaagaccaa tggccaaggg gccaaaggtc gagttacagg ctggcagtta acagcttcgc
     3421 aaaattgaag tggcaacgga ccagcttcta aaatcacttg cgagcccgat gaaaagcacg
     3481 atcaagaatg tctttttcat tttcctgctg acgtttacct ctgccgcggc attggcaact
     3541 gcaaagccgg aaaaacagag cctggttttc gaaggcactg agcgcgccta ctatgtatcg
     3601 gtaccggaga agctcaccct gcccgccccg cttcttgtgc tcctgcacgg ttcggggcga
     3661 gacggtatgt cgcagatcga gcaatggcaa gctctggcgg aaaaggaagg gctggtgctg
     3721 gtggcgccca actcgttgaa ctcgcgtgag tggagcatgg gtgtggatgg cccgggattt
     3781 ctgcacaaaa tcgtggaggc ggtactgggg aagtattcca tcgatggccg acgcatctat
     3841 ctgttcggcc attcggccgg ggcggtgttc gcgttgtaca tgggcgtgat ggaatcgcaa
     3901 tactttgcct cggttgccgt ccatgccggg gctctgggtg aggattttta tccttatctg
     3961 gacctggcga aacgaaagct gccaatcgca atctgggtgg gaaccgaaga cccgtatttc
     4021 tccgtggcga tggtccacaa gacgcagagc gagctgaaaa accatggctt cgatacccag
     4081 gtctttgaga tgaagggcca taaccacgac tattacgccg tcgcgaagga actgaacccc
     4141 gcaatatgga agttcctcag tagcagcagg cttgacgccg aggcgaaatg gcaggaatac
     4201 caaaagaggt aagcgaaatc agctagcagc tggaagctag cagcttcttt caccatgaag
     4261 tacaccaaat actccaaata cgttggcgat ctcgcagatg agatgagcat ggaagacctg
     4321 ctcaacgctc tttctgacta catgctggaa tccggcttca atagccagta catgtctttt
     4381 cagcagatgg acgagcactc gcttgacgca ttgcgccagg ccatccagca ggcgctcgaa
     4441 gccggcgact tcatggacga gtccatgcgc gagcgcctcg agcagatgca gatggaaggc
     4501 cagctcgatg agctgatcga aaagctgatt gaccgcatgc agcaggaaga ctatatctcg
     4561 gtcgaccagc cgcatgatcc ttcgcgccct tccaccactc cgggccagac cggcgagagc
     4621 caggcggaag cgcgctttga aatcacggat aagagcctcg acttcctcgg attcaagacc
     4681 ctgcgtgatc ttcttggctc tttaggccgc tccagcttcg gtcgtcatga cacgcgtgat
     4741 atggctaccg gcatcgaggc cagcggcgcc accaagcctt acgaattcgg cgacacgctg
     4801 aacctcgata tcaccgagac tctctccaac gcaatccagc gcgaagggct gcaccttccg
     4861 ctgaacattg aatactctga tcttcaggtg caccagtgcg agtatcagtc ttcctgcgcc
     4921 acggtcgtga tgcttgactg ctcgcacagc atgatcctct acggtgaaga ccgtttcacg
     4981 ccggccaaga aagtcgctat ggcgcttagc cacctgatcc gcacgcaata tcccggcgat
     5041 tcgctctcgc tggtgctttt tcatgactcc gcagaagaaa tgccgatctc gcagctcgcg
     5101 cgtgtgaaag tcgggccgta ttacaccaat acccgcgaag gcctccgcct cgcgcagcgc
     5161 attctgcagc gccagaagaa agacatgaag cagatcatca tgatcactga tggcaagcct
     5221 tcggcgctca cgctcgaaga cggcaggatt tacaagaacg ccttcggcct cgatccgctg
     5281 gtggtgagtc aaactctgga agaagtttcg aaatgtaagc gtgccggcgt catgattaat
     5341 actttcatgc tggcgtcgga ctacggcctg gtgcaattcg ttcagaaggt cacggaaatg
     5401 tgccgcggca aagcctactt cacgacgcct
//
LOCUS       DASQYP010000329         5698 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_290193, whole genome shotgun sequence.
ACCESSION   DASQYP010000329 DASQYP010000000
VERSION     DASQYP010000329.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 5698)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5698)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5698
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_290193"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..891)
                     /locus_tag="VE783_10655"
     CDS             complement(<1..891)
                     /locus_tag="VE783_10655"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HYX53900.1"
                     /translation="MSRTSTEQELAAPARPHLSRALLWLITVASAVAVANLYYNQPML
                     AAMARTFHADAHGIGLVATFTQAGYALGMPIFIPLGDLVERRRLVVSLFMAVALALAG
                     AALAPNLTLLVVASFFIGLTTLIAQIMIPLGAELSAPEEQGKTIGSILSGILLGILLA
                     RTLSGSVAAHLGWRAMYWIACGLALAFALLLRVRLPRVTAHSHLNYLELIQSLVRLVV
                     ETPKLRQVSLVGAMLFAAFSAFWTTLVFLLETPPYHYGSQTAGLFGLIGATGALAAPI
                     SGRTSDRRGPRFVVAIALGIV"
     gene            1109..2584
                     /locus_tag="VE783_10660"
     CDS             1109..2584
                     /locus_tag="VE783_10660"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53901.1"
                     /translation="MRKLFLGFLLIAFTLPAVCQQDTSTSFSATYAGQMEITTRSPEA
                     RTYFERGLARMQVLHWEEAMREWRDAVAADPQFALGHALLAMLSRDPVEQVAERDKAA
                     ATRAYAGPEEKLIVDWVVNTNQSRWVPAIQAMNEALADYPQDKYLAWLAGLWLTNQRQ
                     SERAIAQFERANQIDPKFADPLNQAAYCYARLGDFDRAFNDLQRYASMMPNEANPQDS
                     LGEISRMAGRFDDSLAHYHESLKIDPGFVESRAGIGDTFAVMGEQAKARSAYADAISH
                     AQTRVQSVSFALQSAATFTRDQEFGKADASFEEVARQAHDQELGILEAEAWRIMSVYQ
                     KDNGKAIKLLSRAEAVLGEKHKMSAAAREQELALILRTRVGRSVHDGSMHDALASLKR
                     MQQLVATNNDGRVRSAFSGAQGAVLMAQGKFEEAIAQLEEDDKNAFSMQRLIVAYDKT
                     GQKDKAARMKQRLAKYYEPSIEQAVVVPLFNKTTLAMKDKN"
     gene            complement(2969..4408)
                     /locus_tag="VE783_10665"
     CDS             complement(2969..4408)
                     /locus_tag="VE783_10665"
                     /inference="COORDINATES: protein motif:HMM:NF024910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="APC family permease"
                     /protein_id="HYX53902.1"
                     /translation="MQTIEPTTPKSQLRKAMGFWDVLLFNIAAVLGPRWVAAAAHNGT
                     SSISLWILAATLFFLPTALVIIELSTRYPAEGGLYVWSKEAFGDFHGFVAGWSYWIYT
                     FFYFPGLLTASVAMSVYIGGPKYAWLASSPRYLLWASLGLLAVAVLLNIIGLNIGKWL
                     QNAGGVATYAPLLMLVGMAWYLGVHHGSSTQFSVKSSLPHWDWDTVNFWSNIAFAFTG
                     LELVCSMSEEVHEPRKTFPRAIYASAALIAAMYIVATVALMVLLPAEKVDVRSGVFQA
                     ISSGSATVGLAWFGVVAALLVTVGNAGGVGSTVAGIARIPFVAGIDRYLPAFFGKIHP
                     RWKTPWISILIQAGISAVILVFSELGSKSVISAYQFLVSMSVILYFIPFLYMYAAVIK
                     LAYRGDRNAADHVLVPGGKFGVWITGLLGFVITAGSMALAGVPPGEEPDKFRFVASLV
                     FWTVAFIGFGLVLYWRGARSKAVETVESR"
     gene            4440..5162
                     /locus_tag="VE783_10670"
     CDS             4440..5162
                     /locus_tag="VE783_10670"
                     /inference="COORDINATES: protein motif:HMM:NF020893.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HYX53903.1"
                     /translation="MARTLHSILRARSAIPAFTLERNGNTTLRSRTLETVDHWIQLHL
                     THLFSRYGYWTVFVGVMVESMGVPLPGETILILASVLAATSGKLNILHVAVVAVIAAI
                     AGDNIGYLAGKSGGRPLLRRYGHLFHIGAETLAHGEEKLRRYGPITVFIGRFIAGLRM
                     LIGPLAGVLRMPWKRFFIFNALGAIAWVAVVAAAAYLLGPAIEPLLRKAGWILIATIV
                     VAAGACWWRGRRQEDAQDRKAA"
     gene            5212..5484
                     /locus_tag="VE783_10675"
     CDS             5212..5484
                     /locus_tag="VE783_10675"
                     /inference="COORDINATES: protein motif:HMM:NF003817.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="oxidative damage protection protein"
                     /protein_id="HYX53904.1"
                     /translation="MPRMVKCAKLGRELPGLDEPPFDTPLGQKIYESISAEAWRMWSE
                     HSKMLLNEYRLQPWKPEAQQFLVEQMQAFLFGAGSALPKEFVPPPK"
     gene            complement(5578..5654)
                     /locus_tag="VE783_10680"
     tRNA            complement(5578..5654)
                     /locus_tag="VE783_10680"
                     /product="tRNA-Pro"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(5618..5620),aa:Pro,seq:ggg)
BASE COUNT         1262 a         1698 c         1664 g         1074 t
ORIGIN      
        1 cacgattccc agcgcgattg ctaccacgaa ccgtggcccg cgccggtctg aagttcgccc
       61 cgagatgggc gcggccagcg cgccggttgc gccgatcagg ccaaagagtc cggcagtctg
      121 gctgccgtag tgatagggcg gtgtttccag caggaagacg agtgtggtcc agaatgcgct
      181 gaaggccgca aagagcatgg ccccaaccag cgagacctgg cgcagctttg gcgtctccac
      241 caccagacga accagcgatt gaatgagctc gagatagttc aaatgcgagt gcgccgtcac
      301 gcgtggaagc ctcacccgga gcagcagcgc gaaggccaac gccaggccgc aggcaatcca
      361 gtacatggcg cgccagccga ggtgggcggc gaccgatccg ctcagcgtac gcgcgagcag
      421 aattcccagc aggatgccgc tgagaatgga gcctatggtt ttcccttgct cctccggcgc
      481 ggaaagctcg gccccaagcg gaatcatgat ctgcgcgatc agcgtcgtca aaccaataaa
      541 gaagctggcc accaccagca gcgtgaggtt cggcgccagc gccgccccag ccagcgcgag
      601 tgcgaccgcc ataaataaag agaccacaag gcgtcgccgc tcaaccaggt cgcccagcgg
      661 aataaaaatc ggcatgccca gcgcgtagcc tgcctgggtg aaggtggcca ccagaccaat
      721 cccgtgggcg tcggcgtgga aggtccgggc catggccgct agcatcggct ggttgtaata
      781 aaggttcgcc accgccacgg cagacgccac ggtaatcagc cacagcaaag cccgcgagag
      841 atgcgggcgc gccggagcgg cgagttcctg ttctgtcgag gtacgtgaca tgcgcggcgt
      901 aattgaatat agatgaggcg gagcgcatgc cgatgcccag tgccggcgaa acgtgctcgc
      961 ccttgaggta atcagcagaa gttaccaatg ttccagccac catcgtgtca ctgaaccttt
     1021 attcaatgtt gctactatct ccccaggcca gcgcgccacc cctctctgcg cggctggcag
     1081 caagttcgga acggagaccc tgttggccat gcgcaagctt ttcctgggat ttctgctgat
     1141 cgctttcaca ttgccggccg tctgccagca agacaccagc acgtcttttt ctgcaaccta
     1201 cgccggacaa atggagatca ccacccgttc tcctgaggcg cgcacctatt ttgaaagagg
     1261 gctggcccgg atgcaggtct tgcactggga agaggccatg cgtgagtggc gcgacgcggt
     1321 tgctgccgat ccgcagttcg cccttggtca tgccttgctg gccatgctgt cgcgcgatcc
     1381 ggtggagcag gttgccgagc gcgacaaagc cgctgcaaca cgcgcctacg ccggtccgga
     1441 agaaaagctg attgttgact gggtggtgaa caccaaccag agccgttggg tgcctgccat
     1501 tcaggcgatg aacgaagccc tggccgatta cccgcaagat aaatatctgg catggctcgc
     1561 cggattgtgg ctcaccaacc agcgccagtc tgagcgcgcc attgcacaat ttgagcgtgc
     1621 caaccagatt gaccccaagt tcgccgatcc gctgaaccag gcagcgtatt gctatgctcg
     1681 cctcggcgat tttgatcgcg ctttcaatga cctgcagcgc tacgcctcca tgatgcccaa
     1741 tgaggcgaac ccgcaggatt cgctcggaga aatctcgagg atggcggggc ggttcgacga
     1801 ttctctggcg cactatcacg agtcgctgaa gattgacccc ggatttgtgg agtcgcgcgc
     1861 cggcatcggc gacacattcg ccgtcatggg cgagcaggca aaagctcgca gcgcctacgc
     1921 tgacgcgatc tcacacgccc agactcgcgt gcagagcgtg agcttcgcct tgcagtctgc
     1981 ggctactttc acgcgcgacc aggagttcgg caaagctgat gcctcgtttg aagaagtcgc
     2041 cagacaggca cacgaccagg aactcgggat tctcgaagcc gaagcatggc gcatcatgtc
     2101 ggtttatcaa aaggacaacg gaaaggcgat caagctgctc agccgcgcgg aagctgtgct
     2161 cggcgaaaaa cacaaaatga gcgccgccgc ccgcgagcag gaactggccc tgattcttcg
     2221 cactcgggtt ggacgatcgg tccacgatgg cagcatgcat gacgcgctgg catccttgaa
     2281 gcgcatgcag cagctcgtgg cgacgaacaa cgatggccgc gtccgctcgg ccttcagtgg
     2341 agcccaggga gccgttctca tggcgcaggg caagtttgaa gaagcgattg cccaactgga
     2401 agaagatgac aagaatgcct tctccatgca gcgcctgatc gtggcctatg acaagaccgg
     2461 ccagaaggat aaagcggcgc gcatgaagca acgcctggct aaatactacg agccgagcat
     2521 cgagcaggcc gtggtcgtcc cgctgttcaa caagaccact ttggcgatga aggacaagaa
     2581 ttaacctgat cggcccctag ctggcgtgta agagataatt gataacaggc tttgtagcac
     2641 aggcgccctc gcctgagccg gattactctc cattgagcca catatctgct taggctttct
     2701 gcaaaaccag gaaatttctg cggcgcccgg cccggcttcg ccagcattcg tgatgacatc
     2761 gagagtcttg cctcaaactc ctcctccgat ctgatcaggt gcacgaacga ccaataagag
     2821 ggaacctcct gagcgcttgt tcacggtatg ggactatgtt tccattgatg ccttccatca
     2881 ttgtcgatgt gtggcaattt gcgctgttta gattgtattt ttggcggcac aggcgaggcg
     2941 cctgtgctac atacgcaggt gcgaccgctc atcgactctc gaccgtttct acagccttgc
     3001 tccgtgcccc ccgccagtag agcaccagtc cgaatccgat aaaagccacc gtccagaaca
     3061 ccagtgaagc cacgaacctg aatttgtcag gctcctcgcc gggaggcacg ccggccagcg
     3121 ccatggagcc tgctgtgatc acaaatccca gcagtcccgt gatccatacc ccgaacttcc
     3181 cgccgggcac cagaacgtga tccgcggcgt tgcggtcacc gcggtacgcc agcttgatca
     3241 ctgccgcata catataaaga aaagggatga agtagaggat cacgctcatc gaaacaagga
     3301 actgataagc gctgatcacg ctcttgctgc ccagctccga gaacaccagg attacggccg
     3361 agatccccgc ctggatcaga atcgatatcc aaggagtctt ccagcgtggg tggattttgc
     3421 caaagaaagc gggaagatag cggtcgattc cggcgacaaa aggaatacgc gcgatgccgg
     3481 ccacggtaga ccccacccca cccgcgtttc cgactgtgac aagcagcgcc gccaccacgc
     3541 cgaaccaggc aaggcccaca gttgctgagc cgctggagat ggcctgaaat acgccgctgc
     3601 gcacatccac cttttcagcc ggcagtaaaa ccatcaatgc gacggtcgca acgatataca
     3661 tggcggcaat gagggccgcg gaagcataaa tagcgcgggg aaatgtcttg cgtggctcat
     3721 gcacttcttc actcatggaa cagaccagtt ccagcccggt gaacgcaaac gcaatgttcg
     3781 accagaaatt tacggtgtcc cagtcccagt gaggtaatga cgactttacg gagaactgtg
     3841 tagagcttcc gtgatgcact cccagatacc acgccatgcc gaccagcatc agcaatggag
     3901 cgtaggtggc gacgccgccg gcattttgca gccacttacc gatgttcagg ccaatgatgt
     3961 tgagcagaac cgccactgcc agcagtccta aagacgccca gagcagatag cgtggactcg
     4021 aagccagcca tgcgtacttc gggccgccga tgtaaaccga catcgccaca ctcgcggtca
     4081 gcaatccggg aaaatagaag aacgtataaa tccagtaaga ccagcctgca acgaatccgt
     4141 ggaagtctcc gaacgcctcc ttactccaga catagagtcc gccctctgcg gggtatcgag
     4201 tagagagctc aatgatcacc agcgcggtcg gaagaaaaaa gagcgttgcc gccaggatcc
     4261 aaaggctgat tgacgatgtg ccgttgtgcg ccgcagcagc tacccagcgc ggccccagaa
     4321 cggcggcaat gttgaacagc agcacgtccc aaaagcccat ggctttgcga agctgggatt
     4381 tcggtgtggt cggctcaatg gtctgcaaag tgctctccgc tttgctggat agtttcggcg
     4441 tggctcggac gctacattct atcctgaggg cacggtctgc catcccggct tttacacttg
     4501 agcgcaacgg caacaccacc ctgcgctccc gcaccctaga aactgtggac cactggattc
     4561 aactgcatct cacccatctt ttcagccgtt acggctactg gaccgtcttt gttggcgtga
     4621 tggtggagag catgggcgtg ccgctcccag gagagacaat cctgattctg gccagtgtgc
     4681 tggcggcgac cagcggaaaa cttaacatct tgcatgttgc cgttgtcgcc gtgattgccg
     4741 cgattgccgg tgacaacatt ggctatctgg ccggcaagtc cgggggcagg ccgttgctgc
     4801 gccgctacgg ccacctcttt cacatcggtg ccgagactct ggcccacgga gaagagaagt
     4861 tgcggcggta cgggcccata acggtcttta tcggccgctt tatagcaggt ttgcggatgt
     4921 tgatcgggcc gctcgcgggc gtcctgagaa tgccatggaa gcgcttcttc attttcaacg
     4981 cgctcggcgc gatcgcctgg gtggctgtcg tcgctgccgc ggcgtacctg cttggccctg
     5041 caattgagcc gctgcttcgt aaggcaggct ggatccttat tgcaaccata gtcgtggcag
     5101 ccggagcttg ctggtggcga ggcaggcgcc aagaggacgc tcaggatcgc aaggcagctt
     5161 gaattcagac gcagcccgct tttgtacaat attttcagga gctttttctg gatgccaaga
     5221 atggtgaaat gcgcgaagct gggccgcgaa ctgcccggcc tggacgagcc cccttttgac
     5281 acgccgctgg ggcagaagat ctatgaatcc atcagcgccg aggcgtggcg catgtggagc
     5341 gagcactcca agatgctgct gaacgaatac aggctccagc cctggaagcc ggaggcccag
     5401 cagttcctgg tggaacagat gcaagccttc ctgttcggtg ccggctcggc tctgcccaaa
     5461 gagttcgttc cgccgccgaa atgagcatgc tgcatggacg agtaacgctg ggcgctgccc
     5521 acagcgattg ttactgcata acaattgtta ctgcataaat agttgtttgg aaggaaatgg
     5581 tcgggacggg cagatttgaa ctgccgaccc ctcgcacccc aagcgagtgc tctaccaggc
     5641 tgagccacgt cccgacttcg aagaagcatc ggttctggcg aaccgatagg gttttgag
//
LOCUS       DASQYP010000330         5649 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_269403, whole genome shotgun sequence.
ACCESSION   DASQYP010000330 DASQYP010000000
VERSION     DASQYP010000330.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 5649)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5649)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5649
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_269403"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(179..1360)
                     /gene="dusB"
                     /locus_tag="VE783_10685"
     CDS             complement(179..1360)
                     /gene="dusB"
                     /locus_tag="VE783_10685"
                     /EC_number="1.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR00737.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0017150 - tRNA dihydrouridine synthase
                     activity [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA dihydrouridine synthase DusB"
                     /protein_id="HYX53905.1"
                     /translation="MHKFWETPLTTTSVPQGARVPESLQVGNVQIAPATLLAPMAGVT
                     DTVFRRFIRNASFVRPPEDVMACSSEQTSSAGAEKSACGLLMTEFTSADGLFRTREKK
                     RKRYLHFYADEHPISAQLFGSAPYTLSEAARIVQDAGFDMVDLNLGCPAKRVVKCNGG
                     SGLLKDLPVIQKIFETVRAAVKIPFTVKFRLGWDDKNIVCVELARMAQECGLNAVALH
                     ARTREQGYSGNARWEWIEAVKQAVTIPVIGNGDIRTPEDAVAMVAQTGCDGVMIGRTA
                     ASNPWIFRQIRQYLDTGRYDQPTDADRYQMIRTYFQMLVEEEMHGTAGKMKQFVAWFT
                     HGVVGGSALRKAVYHAQKGPEILASVDGFFEELLSGKAPEPAVPSMISPEPDLLAACG
                     D"
     gene            complement(1505..1720)
                     /gene="rpmE"
                     /locus_tag="VE783_10690"
     CDS             complement(1505..1720)
                     /gene="rpmE"
                     /locus_tag="VE783_10690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004811173.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L31"
                     /protein_id="HYX53906.1"
                     /translation="MKAAIHPKYEEVHVHCACGNTFTTRSTHKGAISLEICSNCHPFF
                     TGKQRLVDTAGRVELFRRKYEKAAKKQ"
     gene            complement(1858..2334)
                     /locus_tag="VE783_10695"
     CDS             complement(1858..2334)
                     /locus_tag="VE783_10695"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53907.1"
                     /translation="MEQIVSEYEIPPALSGAFWKKVVLFLSITGFAFVFRWAINLLFG
                     WKDASFSYQLIMAAALGAVLTFGRLRVTRRATLTLGDGFIEARTDMQWFKVRKRIERT
                     AIRHIKEGPSGIAIMDRGEFGARMLGFIYVPIRLPQYQQVRSRLAHWHHIERRSWG"
     gene            2427..4760
                     /locus_tag="VE783_10700"
     CDS             2427..4760
                     /locus_tag="VE783_10700"
                     /inference="COORDINATES: protein motif:HMM:NF013442.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="malate synthase"
                     /protein_id="HYX53908.1"
                     /translation="MVRDDILQKFPDLFGPKSANGRNVSVEEAITTLTRELRPHIAAA
                     LTARRQILHSPTPVREKYGWPKWETTYQDPISGKPWTYRDIVQGLIDNFLGKDTPVRW
                     RLNDEVPIPPDAHPLKNAGLELTGPWHPLDMAFNALNSPAPMNMPDFEDASPPHFQPD
                     GTAVNQPVGVFAALNNAMQIFAGEWNTKPYEVSKKGKKREYRITKPQGQWPTRFGRPP
                     GLHITYDHVIVDGRPAPGMVVVATLWAFNNFDSLKGSGSGVYFYIPKLQSPQEAWIVE
                     KLLSRLEEMMGVPAGTIKIKMLYEEGNGGRTLPAIAWTLRRRLLGTNVGRWDYLGSLI
                     EMWKDDPKGIYPDPQTVGMASPNMIAYQQFNALMMLMGGMKNGELENAAPIGGMAAVM
                     IYQQSDAYGRSRYNPLALRAMVIDKLRERVLGLIFVPDGPVSGQPTLEDILAGKAKGK
                     LYDCYRQSWVASPEPEYVASGNAPLRAPVSELQKIISAPQSTAQVKDKAVPTPNSGLS
                     DAERQVFHSRGLLNAEGKITPQVVTRESIDTPEKLLSAQRWEAIYGIPKGDVTIEHIQ
                     HAFYMAANYGFQILNGNFAAAIDDYELKLRFMNDLATYRIDVSWLWTLVQHHATITKD
                     GYLKRPTLTEDGVEPASNAEQVKAGTKFTRDLFDKVFAYHNEWTKAFFAEQDRRGEPG
                     RFDRTKADTIMEILKKQLLSPQYIQHSARVLFVVGQANRQQAAELLEAIFDHSREEVV
                     KLVQSGKLSHAALAAHDYVFDIFPETAGKIGQGNAAD"
     gene            5148..>5649
                     /locus_tag="VE783_10705"
     CDS             5148..>5649
                     /locus_tag="VE783_10705"
                     /inference="COORDINATES: protein motif:HMM:NF013828.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HYX53909.1"
                     /translation="MSTAPQSQSAECPLCEGTGWKRIEVPGKASRVAPCDCRNEARTA
                     RLLKGARIPARYEHCTLADFDTNFSGAHRMLPAARLAAGRFVEEYPIDKTGLLFIGPV
                     GTGKTHLAVGIIQELIRQKGVPSRFCDYRELLKEIQNSYNSSVQTTELEILRPIFDVE
                     VLVLDEL"
BASE COUNT         1196 a         1758 c         1580 g         1115 t
ORIGIN      
        1 taatcaatgg aataggtgca agcgcagaat ttggacgtcc tttgccgcta tccaaacgcg
       61 ttctcctgga ccgttgcgcg gggcgccgct ctgcgcgaaa tgagattggc ccaccgaaac
      121 gggatatgca acaagacgga accagcgctc taggtgcggc accccgccag tccctgggtc
      181 agtctccgca ggcggccagc aggtcgggtt ctgggctgat catgctaggc acagccggct
      241 ccggggcctt gccgctcaac agctcttcaa agaacccatc cacgctggcc agaatctccg
      301 gccccttctg tgcgtgatag accgccttcc gcagcgcgct gccgcccacc actccatggg
      361 tgaaccaggc gacaaattgc ttcatcttgc ccgctgtgcc gtgcatctct tcctccacca
      421 gcatctggaa atacgtgcgg atcatctggt agcggtccgc gtcggtcggc tggtcatagc
      481 ggccggtgtc gagatactgg cggatctggc ggaaaatcca gggattcgac gccgccgtgc
      541 gaccgatcat tactccatcg cagccggttt gcgcgaccat ggccacagcg tcttcaggcg
      601 tgcgaatgtc gccattgccg atcaccggaa tggtcaccgc ctgcttcacc gcttcgatcc
      661 attcccagcg tgcgttgccg ctatagccct gctcgcgtgt gcgggcgtga agcgccacgg
      721 cattcaaacc gcattcctgc gccatgcgcg ccagttccac gcatacgatg ttcttgtcgt
      781 cccagcccag gcggaacttc accgtgaagg gaatttttac ggcggcacgc acggtctcga
      841 agattttctg gataaccggc aggtctttta gcaatccgga gccaccgttg cactttacga
      901 cgcgcttggc cgggcagccc aggttcaggt ccaccatgtc gaagcccgcg tcttgaacaa
      961 tacgagcggc ttcagagagc gtgtaagggg cgctgccgaa gagctgcgcc gaaatcgggt
     1021 gctcgtcggc ataaaagtgc aggtagcgct tgcgcttctt ctcgcgcgtg cgaaacaggc
     1081 cgtcggccga ggtgaattcg gtcatcagca ggccgcaggc tgatttttcg gcacctgctg
     1141 aagaggtctg ctcgctggag caggccatca cgtcctcagg cggtcgcaca aagctcgcat
     1201 tgcggataaa gcgacggaag acggtatcgg tcacgcctgc catgggcgcc agcagagtgg
     1261 cgggggcgat ctggacgttg ccgacctgga gagactccgg cacgcgcgcg ccctgcggca
     1321 cgctagtggt ggtgagcgga gtttcccaga atttgtgcat aggagcaatt agcaaatggc
     1381 aattagcaat tggccagaac aatctcagcc agcgcagtct ggctaattgc caactgctat
     1441 ttgctaattg ccacaaagcg atggcctccg cgcgggaggc cgggtcgcaa actcttgacc
     1501 gcccttactg cttcttggcg gctttctcgt acttccggcg gaagagctcc acgcgtccgg
     1561 cggtgtccac cagccgctgc ttgccggtga aaaacgggtg gcaattggag cagatttcca
     1621 ggctgatcgc gcccttgtgg gttgaccggg tggtaaatgt gttaccgcac gcgcagtgca
     1681 cgtgcacttc ttcgtacttg ggatgaatcg ctgccttcat tcgcctctgg acctttcgcg
     1741 gtaaagcctt attttagctc agattagccg attttggcta tcttcaccgc atctggttgg
     1801 atgagccacg cgaagaaacg attcaacgtg ctccacttcc cgaatcggcc accccggcta
     1861 cccccaactc cttctctcga tgtgatgcca gtgagccaaa cgtgacctaa cctgttgata
     1921 ctgtggcaat ctgatcggga cgtaaataaa accgagcatt cgggcgccaa actcaccccg
     1981 atccataatc gcgatgccgc ttggcccttc tttgatatgc ctgatagcgg ttcgctcgat
     2041 ccgcttacgc accttgaacc attgcatgtc agttcgggct tcgataaatc cgtccccaag
     2101 tgtcaatgtc gctctgcgcg tcacccgcaa ccgaccgaat gttaataccg caccgagggc
     2161 tgccgccatt atgagttggt acgagaagga agcgtctttc catccaaaaa gcaaattgat
     2221 ggcccagcgg aacacgaaag cgaaaccagt gatcgagaga aacagtacga ccttcttcca
     2281 gaaggctccc gagagagccg gcgggatttc gtattccgag acaatctgct ccatacccaa
     2341 tgcggaaaga ttttaacgcg gcccggaagg tttaaaatca ttgtttcgac tttgcttgcc
     2401 aatctgacta gaggagcttc gcgcccatgg ttcgcgacga tattcttcag aagttccctg
     2461 acctcttcgg gcccaaatcc gccaacggcc gcaatgtaag cgttgaagag gcgatcacca
     2521 ccctcacccg cgagctgcgc ccccacatcg ccgctgccct taccgcgcgc cgccagatcc
     2581 tgcactcgcc cacgcccgtt cgcgaaaaat acggctggcc caaatgggaa acgacatatc
     2641 aggaccccat ctctggcaag ccctggactt atcgtgacat cgtgcagggc ctgattgata
     2701 acttcctggg caaggatacg cccgtacggt ggcgcctcaa tgacgaagtg ccgatccctc
     2761 cggatgccca tccgctcaag aacgccgggc ttgaactcac cggcccgtgg catccgctgg
     2821 atatggcttt caacgcgctg aacagccccg cccccatgaa catgccggac tttgaagacg
     2881 cctcgccgcc gcacttccag cccgatggca cagccgtaaa ccagccggtc ggtgtcttcg
     2941 ccgcgctcaa caacgccatg cagatctttg ccggcgagtg gaacaccaaa ccttacgagg
     3001 tcagcaagaa aggcaagaag cgcgaatacc gcatcaccaa gccgcagggg cagtggccca
     3061 cgcgcttcgg gcgtccgccc ggcctgcaca ttacttatga ccatgtgatc gttgacggcc
     3121 gccccgcgcc gggcatggtt gtggtcgcca cgctgtgggc cttcaacaac tttgattcgc
     3181 tcaagggctc gggcagcggc gtctacttct atattcccaa gctgcagtca ccgcaggaag
     3241 cctggattgt cgaaaagctg ctctcgcggt tggaagaaat gatgggcgtg cccgccggca
     3301 ccatcaagat caagatgctc tatgaagaag gcaacggcgg ccggaccctg cccgccattg
     3361 cctggacgct gcgtcgacgc ctgctcggca ccaacgtcgg ccgctgggac tatcttggca
     3421 gcctgatcga gatgtggaag gacgatccca aaggcatcta ccctgacccg cagaccgtgg
     3481 gcatggcttc gccgaatatg atcgcctacc agcagttcaa cgcgctcatg atgctgatgg
     3541 gcggcatgaa aaacggcgaa ctcgaaaacg ccgcgcctat cggaggcatg gccgcggtaa
     3601 tgatctacca gcagagtgac gcctatggcc gctcgcgcta caaccccctg gctctgcgtg
     3661 ccatggtgat cgataagctg cgtgaacgcg tgctcgggtt gatctttgtt ccggatggcc
     3721 cagtctccgg ccagcccact ctggaagata ttcttgcggg caaggccaaa ggcaaactct
     3781 acgattgcta tcgccagagc tgggtggcca gccctgagcc cgagtatgtt gcctcaggca
     3841 atgcgcctct gcgcgctcct gtgtccgaac tccagaagat catcagcgct ccgcagagca
     3901 ctgctcaggt aaaagacaaa gccgtgccca cgccgaacag cggcctgagt gacgccgagc
     3961 ggcaggtgtt tcactcgcgc ggtctgctca atgccgaagg caagatcaca ccgcaggtcg
     4021 tcacccgcga gtccatcgac acgccggaaa agctgctctc cgcccagcga tgggaagcca
     4081 tctacggaat cccgaaaggc gacgtaacca tcgagcacat ccagcacgcg ttctatatgg
     4141 cggccaatta cggctttcag atcctgaacg gcaacttcgc cgccgccatt gacgattacg
     4201 agctgaagct gcgcttcatg aatgatctgg ccacctaccg tattgacgtc tcatggctgt
     4261 ggacactcgt ccagcaccac gccaccatca ccaaagacgg ctacctcaag cgccccacgc
     4321 taacggaaga cggcgtggag cccgcgtcga atgctgagca ggtaaaagcc ggaaccaagt
     4381 tcacccggga cctcttcgac aaagtctttg cctatcacaa tgaatggaca aaggccttct
     4441 tcgccgagca agaccgccgc ggcgagcccg gccgcttcga tcgcaccaag gccgatacca
     4501 tcatggagat cctgaagaag cagctcctct caccgcagta catccagcac agcgcgcgcg
     4561 tgctctttgt agtcggccag gccaaccggc agcaggccgc ggaactgctt gaggccatct
     4621 tcgaccactc acgtgaagaa gttgtgaagc tggtgcagtc gggcaagctc agccatgccg
     4681 cgctcgccgc gcacgattat gtgttcgaca tctttcccga gacagccgga aaaatcggac
     4741 aggggaatgc agcggactag tgaagtggtt cgtttctcaa ggttttgctg tcgaggtacg
     4801 gcccgatctc ggctgtgcct ttttctttaa aaagaagagc tgtattgaat caccttcgag
     4861 aaacggggtg ttcagcctca ctggtttatc gacggtcttt gtgatccact gaactccgag
     4921 cgccgtcagg cgcgtcatca ggttagcccc cggtggagcg aagcgaaacc gggggtgcgc
     4981 ttcgatagag actccgagcg ccgtaggcgc gataccagaa aaccggccag cgcgagaaca
     5041 ttgccgagtg catcaattgt gcaaatcctg tgtacatcac gccatcgcga cgcctaaatt
     5101 tccgccgcta tgatgttcgg aaatgctatt ttctaagcag cattcccatg tctactgctc
     5161 cccaatcgca atccgctgaa tgtccgctgt gcgaaggcac gggatggaaa cgcattgaag
     5221 ttcccggcaa ggccagccgc gtggcgccct gcgactgccg caacgaagcg cgcaccgcgc
     5281 gtctgctgaa gggggctcgc atccctgcgc gttacgaaca ctgcacgctg gcggatttcg
     5341 ataccaactt ctccggcgca catcgtatgt tgccggcggc acgcctggcg gcgggacggt
     5401 tcgttgagga atatccaatc gacaaaactg ggctactctt catcgggccg gtcggcaccg
     5461 gcaagacgca cctcgcggtc gggatcattc aggagctcat ccggcagaag ggcgtgccca
     5521 gccgcttctg cgactatcgc gagctgctca aggaaatcca gaactcctac aactccagcg
     5581 tccagaccac cgaactggaa atcctgcgcc caatctttga cgttgaggtg ctggtgctcg
     5641 atgaactcg
//
LOCUS       DASQYP010000331        13260 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_246805, whole genome shotgun sequence.
ACCESSION   DASQYP010000331 DASQYP010000000
VERSION     DASQYP010000331.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 13260)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13260)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13260
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_246805"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1253)
                     /gene="lysC"
                     /locus_tag="VE783_10710"
     CDS             complement(<1..1253)
                     /gene="lysC"
                     /locus_tag="VE783_10710"
                     /EC_number="2.7.2.4"
                     /inference="COORDINATES: protein motif:HMM:NF006570.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004072 - aspartate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lysine-sensitive aspartokinase 3"
                     /protein_id="HYX53910.1"
                     /translation="MIVMKFGGTSVQDAEAIDRVAAIVRERLPEKPVVVVSALAKITD
                     QLLAMAAAAGAGQRDKALDLCAAARERHNQTALNLLGQEGFQKIAPELAADFSGLEEL
                     LRGVVAVGELTLRTTDIISGFGERVSSKIATAAFQHRGIQATHVDSRQCIVTDANYGK
                     AVPQFGETNARLAETVAPLLERGRVPVMGGFIGSTREGSSTTLGRGGSDFSAAIVGAG
                     LNATRIEIWTDVDGMMTTDPNLCPKAHRIRTISFEEAAELAYFGAKVLHPATLLPAIQ
                     KNIPVLILNSRNPKCDGTRITATAPKSKTIFKAIAAKKRITVVDVVATRMLMAHGFLK
                     SIFEVFANHRCPVDMVSTSEVSVSVTVDSNESIAAIAADLAKLADVKYEGRKAIVCLV
                     GENIRNTPGIAARVFSAIPDTNIQM"
     gene            complement(1303..2358)
                     /gene="asd"
                     /locus_tag="VE783_10715"
     CDS             complement(1303..2358)
                     /gene="asd"
                     /locus_tag="VE783_10715"
                     /EC_number="1.2.1.11"
                     /inference="COORDINATES: protein motif:HMM:NF006416.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004073 - aspartate-semialdehyde
                     dehydrogenase activity [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate-semialdehyde dehydrogenase"
                     /protein_id="HYX53911.1"
                     /translation="MNKKIPVGILGATGTVGQRFIQLLENHPWFEVAWLAASDRSAGK
                     PYREAVSWRLATPIPGRVAGMIVNAAAPAGGTPKLIFAALDSAAAREIEPAFAEAGCA
                     VVSNSSAFRMAEDVPLLIPEINAEHTELIKAQKWYKNNGGFMVTNPNCSAIGLVMALG
                     PLHTRFGVEKVFVATMQAVSGAGYPGVPSLDILGNVIPYIASEEPKMEAETGKLLGTL
                     EAGKIRPADLLVSAHCNRVPVEDGHTESASIKLGKEAQAEEIISAWQEFRCAPQKLRL
                     PSAPEQPVIYDPAPDRPQPRLDRDRGNGMSAVVGRLRPCNIFDWRFTVLSHNTIRGAA
                     GAAILNGELLKAQGYIS"
     gene            2762..3322
                     /locus_tag="VE783_10720"
     CDS             2762..3322
                     /locus_tag="VE783_10720"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53912.1"
                     /translation="MISSRPGKFVLIWMCVVAAFSVHATAQTSSAQLSVNLTVQSSIS
                     LVFNNNPNVGTVGFCPLTNAGTNSVGLDLGTAAFPGNLHTSTCVNYTHLNAAFYQVSS
                     AFDVLVTKANTSSPNYRLAAQISTVPPAGVVWLLNNTTLTTGLTTLDTADNFGQAITK
                     TLQVQVRNNVPAQVLQETITFLATAN"
     gene            3330..3890
                     /locus_tag="VE783_10725"
     CDS             3330..3890
                     /locus_tag="VE783_10725"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53913.1"
                     /translation="MKKLLTMRTAAMMALLFAGSALLGQNPTAGGVINGTLVNKSGIS
                     LVFNSDPQSVTLGGAGTSAASLNFGNISAFGPLATGVTRPAVTATNYTVRALFDVQVT
                     QGGLTSTTYTLQAQLAGPTPTGLSYRVDAITLSTAFQTLQTNGAYDANVQHSLDLVVL
                     KAAPGAGGPATGTALTTTINFTATAN"
     gene            3940..4467
                     /locus_tag="VE783_10730"
     CDS             3940..4467
                     /locus_tag="VE783_10730"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53914.1"
                     /translation="MKKLILIAAALMMISSFAAAQTTASGTLSVTATVNGSINLVFNS
                     DPAGVALTGSGTNAATLAFGTVQAFGGTLTTGVTRTPGTTSFTVSSPFDVNVAKANLT
                     SANYTLKAQLNAADATNTWQVGGVTVTSAAAATITGTGSYDTNNAFTLALTIPFTTAS
                     GTSISNSLNFTATAN"
     gene            4652..5092
                     /locus_tag="VE783_10735"
     CDS             4652..5092
                     /locus_tag="VE783_10735"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53915.1"
                     /translation="MRAQTLGTLSVSLVPAPDGAPLSGGNPAQRSLNLGTVSYNGLST
                     VPNVTVTTQVGSFLVTTRFAIAIQDATQQVSAATVLVGLAAPESFFTLRLDSLTLSPT
                     PQVVQAQAKVGSTIEHRLDVQVPTSLTERNSQLQNTLLFQVIAN"
     gene            5105..5944
                     /locus_tag="VE783_10740"
     CDS             5105..5944
                     /locus_tag="VE783_10740"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53916.1"
                     /translation="MHKLPLSNFLKLLMSFTVALGCAAHAQLAPAPSPSPAPQAIPPS
                     ISLSPAVVMAKGSFGQGLTQVLTLTNNTGMDLAFELQAQDIVVKDGKRTFATAGETPN
                     SIAATAVFTPKSVLVKAHTTASAEVRLTIPAKTDLRAVSAIFMGTDKLQSSASNVAMT
                     ASLAALITFNLTDNAKLQQEPAHVLPASETANMTIRQWVANVGSEPVLPEGTAAVLNA
                     KGNLMGKTTFPQQRLLPGERLEFSAEYPDQLQPGDYRALCSFQYEGKVLTNTAEFKVD
                     AKP"
     gene            5944..8559
                     /locus_tag="VE783_10745"
     CDS             5944..8559
                     /locus_tag="VE783_10745"
                     /inference="COORDINATES: protein motif:HMM:NF025006.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxypeptidase regulatory-like
                     domain-containing protein"
                     /protein_id="HYX53917.1"
                     /translation="MKVLCGVLCFLAAAITATQGQAPLQVGYQKRVEFALSGASAAYS
                     LDSNIAEASAANGLVVIAGKAPGTTNVIIVTQAGVQTLTVNVPMPAPILPPGFEPPEN
                     RFNGETGSYEFRYNSDPGQITNSLEFRRTQGESFDRLLLVNANLFSAGSSTSNVGFPL
                     LSYEISRPKYDYTLVDQNVANSPLTLDSYLVRGMHAKIGDWQFHGGATSIATFQGLFL
                     TTQPEYVAGVSRDFRLDNRNTVQANFYYFRNPEELALVTANGPVGTLAYHYTDHKHSS
                     LVTEWGFSHGVAFATRGAYDDERTHLNGQVRVQGPSFATLAVNNQHGTFAELNGSRQL
                     NSRFYLSGDLNQSNFNLRNLQQNTFTSTALLNFRMTRNWSLTGGSAYSNFQSKLPAGP
                     EVRTLNLPVGVDFSSRHFGSGFQYERTVNFESSGGNDYAGNLRGSFGQFNSTAFYRHD
                     VQVPAVSTIFSQVPGLQDALERAGIVASTPEQLADLLRNTALLAALGFTTPFIVDLAP
                     SRNDYGANLTWLGRSGHKQQLDLSYLNSDTKLVVGGFRLETASASYAQRLNATNTIVG
                     TAGVVRSTNNGVQDTRPLFTLALQHRFNSVPGMILPGRHGVIEGRVFRDDESSGVFGA
                     GSPTMAGIEVKLDDQRVTRTDANGHYAFHHVPYGSHQVQASVVSAEPFFFTTDSPATT
                     DINSTVNFGISFAKGQVFGFVRNDAGAGVSGVTVEIQGEKLTRRVQTSGLGKFGFPGL
                     PAGNYTVQTVAESYPAGYSLQALAPEQVQVEPGKPASMEFTVRALRSIAGHVMIYDTQ
                     TLKTVPLTGVIVRLQELSLQMKTGADGAYLFRNLPAGTFTISLQFEGRTLAQQVVVPA
                     EPASIRNIDLNAGSK"
     gene            complement(8604..10478)
                     /locus_tag="VE783_10750"
     CDS             complement(8604..10478)
                     /locus_tag="VE783_10750"
                     /inference="COORDINATES: protein motif:HMM:NF012869.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HYX53918.1"
                     /translation="MDEKPGKGLKLRVRVVVPMEPGKPAKRSTLGLILHIARPYWPHL
                     TLIFLLNLIAAPITLLLAFPLKIAVDNVIGQQQLPQVLARLIPHTAHPGKPAILLLAV
                     GLLIVLSLLLNLQSFATWLLQTYTGEKLVLDLRTQLFWHVQRMGLLFHDKRGTSEVAY
                     RIQNDAPAVQYIFLQGVMPLVSSTLSFLALLYVTIRIDWVLSVIALSISPVLFVLARK
                     SSRRARAGWDDIKKLDSSAMLVLYEALSSIRVVKAFGQEQFEDQRFKLRSRHRMQEQV
                     KVASMQAMFHVLITTTIALGSALAMWVGVHHVQTGVLTLGELLLVMAYMTQLYDPLRT
                     ISAKMPELQSWIVSINRAVALMDEAPEVAEPEFAIPASRVEGDIRFSNVMFDYPSSGR
                     ALNGVSFQVPAGTRVGIIGPSGSGKSTLVNLLTRFYDPSSGEILLDGNDLRQYRLADL
                     RQQFSIILQEPVVFSATVAENIAYARHDATREEIIQAAKAARAHDFITALPDGYDTRI
                     GDGGCRLSGGQRQRLAIARAFLKDAPVLIFDEPTSAVDIHTEQEIMQATEQLVRGRTT
                     FIIAHRLSTVKQCDMLLVLKEGKLAAVTENFREAISALAETTKTETWPTDTVADVVAT
                     "
     gene            complement(10725..11945)
                     /locus_tag="VE783_10755"
     CDS             complement(10725..11945)
                     /locus_tag="VE783_10755"
                     /inference="COORDINATES: protein motif:HMM:NF014081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HYX53919.1"
                     /translation="MNRAIIATLLSVCFLSIFAFSQEHPVTIHAQTLFDGKGRVLHDV
                     LLVVRNGKIQSISPNSKSPATYDLQSATVMPGWIDLHDHIVWHFGPNGRIEDKSETPY
                     QASLAAAANAYATLMAGFTTIQSVGNPEDKDLRAAIAHGGVPGPRLITSLEPIEDPKL
                     TPEQLRETVRKLKADGADLVKIFASKSIRQGGGQTLSEEQLQAICGEAKGLGLRTLVH
                     AYRSAVRAAANAGCTQVEHGTYATQQDLDAMAQHGTYFDPQVGLVIHNYLDNREKFIG
                     VGSYTEEGFAKMQEVLPVIAEMFKHALATPKLKIVFGTDAVAGAHGRNAEEFIYRVQA
                     GQDPMDALVAAQSRAAESLGMQTQIGSIAPGMQADIIAIDGDPLKDITAVRRVVFVMK
                     GGKLYKNEPSASFK"
     gene            12184..13086
                     /locus_tag="VE783_10760"
     CDS             12184..13086
                     /locus_tag="VE783_10760"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53920.1"
                     /translation="MTTMKSKTATLLAIIVLAAACTTLPAQTKPDPYKGFVEYETFQG
                     TVNSDSRLLKLDSTFGWDFNKHFGVFGGVPFYFSHASSTTTGTTSTSNSGIGDIYAGM
                     VFRAPKTPLNYVGAITASAPTGSTSNGLSTGRAGVDFSNHISHGFSKVTPFLDAGVSN
                     SVPDSQFSTRPFTSLGLITHWEEGADYEVVKHTYIGGSGYQILPFGNQKVFSKLVGKG
                     QGGGGTGGGGTGSGKNSFDNNAVSSGSDLTRENGFNAWVGFEPTPLWRAEIGVTRSMT
                     FDLTSVAFNLRFNVGRMLRSHKIS"
BASE COUNT         2809 a         3747 c         3969 g         2735 t
ORIGIN      
        1 atcatctgga tgttcgtgtc tgggatcgcg ctgaacacgc gcgccgcgat tcccggcgtg
       61 ttacggatgt tctcacccac cagacagaca atcgccttcc tgccttcata ttttacgtcc
      121 gccagcttcg ccaggtcggc ggcaattgca gcaatggatt cgtttgagtc aaccgtgacg
      181 gaaacgctga cttctgaggt ggagaccata tccacggggc agcgatggtt cgcgaacacc
      241 tcaaagatgc ttttcagaaa gccgtgggcc atcagcatgc gggtggcgac cacgtccacc
      301 acggtgatgc gtttcttggc ggcaattgcc ttgaaaatgg ttttgctttt tggtgctgtg
      361 gcggtgatgc gcgtgccgtc gcatttcggg ttgcgcgaat tcaggatcag tacggggatg
      421 ttcttttgaa tcgccggtaa cagggtggcg gggtgcaata ccttcgcgcc gaagtaggcg
      481 agttcggcag cttcttcaaa gctgatggtt ctgattcgat gcgccttggg acacaagttg
      541 ggatcggtgg tcatcatgcc gtccacgtcg gtccagatct cgatgcgtgt ggcattgagt
      601 ccggcgccca caatggcagc gctgaaatct gatccgccgc ggcccagcgt ggtggaactg
      661 ccctcacgcg tggagccgat gaagccaccc atcacgggaa cgcggccgcg ttcgagcagc
      721 ggagcaacag tctcggcaag gcgcgcgttc gtctccccga actgcggcac ggctttgccg
      781 tagttggcgt cggtgacaat gcactggcgt gaatccacat gggtagcctg aattccgcga
      841 tgctggaatg ccgccgtcgc aatcttggag gaaactcgct cgccgaagcc actgataatg
      901 tccgtggtgc gcagcgtgag ttctcccacg gccacaaccc cccggagcag ctcttccaac
      961 ccgctgaagt cggcggcaag ctccggcgcg atcttctgaa aaccttcctg ccccagaagg
     1021 tttagggctg tttgattgtg gcgctcgcgg gcggcagcgc agaggtcgag agccttgtcg
     1081 cgctgaccgg cgcctgcggc tgcggccatc gcaagcaact ggtcagtgat tttcgcaagt
     1141 gcactgacca ctaccaccgg cttctcagga aggcgttcac gcacgatggc cgcgacgcgg
     1201 tcgatggctt cggcgtcctg aaccgaggtg ccgccgaatt tcattacgat catggcagca
     1261 ccatcgcgct atccgcatgc gaactcaatt gcgcatgctc actcaactga tgtagccctg
     1321 tgctttgagg agttcaccgt tgaggatggc cgccccggca gcgccgcgga tggtgttatg
     1381 ggagagcacg gtaaagcgcc agtcgaagat gttgcagggg cgcagccggc caaccacggc
     1441 ggacataccg tttccgcgat cgcgatcgag gcggggctga gggcgatccg gcgcagggtc
     1501 gtagatgacg ggctgctccg gcgcgctggg cagcctgagc ttttgcggcg cgcagcggaa
     1561 ttcctgccac gcagagatga tctcctctgc ctgggcctct ttgccgagtt tgatcgacgc
     1621 ggattcggta tgaccgtctt ccaccgggac gcgattgcag tgcgcgctta ccagcaagtc
     1681 agcgggcctg atcttcccgg cctcaagcgt ccccaggagt ttgccggttt cggcttccat
     1741 cttcggctct tcactggcga tgtacggaat cacattgccg agaatgtcga gtgagggaac
     1801 gcccgggtac ccggcgccgc tcaccgcctg catggtggcg acgaacactt tttctacgcc
     1861 gaagcgggta tgcagcgggc caagagccat gaccagaccg atagccgagc agttgggatt
     1921 cgtgaccatg aacccgccat tgttcttgta ccacttctgc gccttgatca actcggtgtg
     1981 ctcggcgttg atctccggaa tcagcagagg aacgtcttcg gccatgcgga aggcactgga
     2041 gttggaaact acggcacacc cggcttcagc gaaggcgggt tcaatctccc gcgcggcagc
     2101 agagtcgagt gcagcaaaga tcagctttgg ggtgccacca gccggagcgg cggcgttcac
     2161 gatcatcccc gcgacgcgcc ctggaatcgg agtggcgagc cgccagctta cggcttcgcg
     2221 gtagggcttg cctgcggaac gatccgaggc cgcgagccag gccacttcaa accagggatg
     2281 gttctcaagt aactgaataa agcgctgacc caccgttccg gtggcgccca gaatgcctac
     2341 agggatcttc ttgttcatgg cctgaaactt cgattctagc atttgcgaag ttggtacctg
     2401 agcggatggc tgttgcatcc cgctgttccc cttagattat tcattcattc agggtgagca
     2461 gctaaggtca cgaccgaagc ggaggcaaga actccacata atcactgatt gtgaagcccg
     2521 aagcagctta agtacaacta tcgccaactt gctttcggat ttgcgccccg gaacctttct
     2581 gttcaaaaga aatgacttca gtaatgtttg cttgggcaga gtctcaccat agactgtgac
     2641 taaaggcggc gcacctgttg tgcgagggac agtgtacaca ctgtggtatc ccgcacagca
     2701 gaagaggggt agcgcagaga agatgagacc tgcaagttga gcacttgcag taccagatgc
     2761 aatgatcagc agtcgacccg gaaaattcgt tctgatttgg atgtgcgttg tcgcggcgtt
     2821 ttcggtgcac gcgacggcgc agaccagctc cgctcaactg tctgtgaatc ttacggttca
     2881 atcgtccatc agcctggtgt tcaacaacaa tcccaatgtg gggacagtag gcttctgtcc
     2941 gctgacgaat gcgggaacca atagtgtagg ccttgatttg ggaacagcag cgtttccggg
     3001 aaatctccat acttccacct gcgtgaacta cacgcacctg aacgccgcgt tttatcaggt
     3061 gagcagcgca tttgacgtac tggtgaccaa ggcgaacacg agcagcccca attaccggct
     3121 ggctgcgcag atttccaccg taccgcctgc cggcgtggtc tggctgctca acaacacgac
     3181 cctgaccacc ggcctgacaa cattggacac ggccgacaat ttcggacaag cgatcaccaa
     3241 gactttgcag gtgcaggtga gaaacaacgt accggcgcag gtgctgcagg agacgatcac
     3301 gttcctggcg acggcgaact aggtttgcaa tgaagaagct ccttacaatg cggactgcgg
     3361 cgatgatggc actcttgttt gccggatccg cactgctcgg ccagaatccc accgcaggcg
     3421 gggtgatcaa cggcacgctg gtgaacaaga gcgggatttc gctggtgttt aatagtgatc
     3481 cccaatcggt gacgctaggc ggcgcaggaa cctcggcagc cagcctgaat tttgggaaca
     3541 tttctgcctt tggcccattg gcaacgggcg tgacccgtcc ggcagtcacg gccaccaact
     3601 acacggtacg ggcattgttc gatgttcagg tgacgcaggg cggcctgacc agtacgacat
     3661 ataccttgca ggcgcagctt gcaggcccga cgcctaccgg actcagctat cgtgtggatg
     3721 ccatcacgtt aagcaccgcg tttcaaactt tgcagacgaa cggcgcgtat gacgcgaatg
     3781 tccagcatag cctggattta gtggtcctga aggctgctcc cggagccgga ggtccggcaa
     3841 ccggaacggc gttgaccacg accatcaact ttacggctac ggccaattga gttttgcagt
     3901 aacagaagtt ctgcaattta agaaggagag agaggaacca tgaagaagtt aatcctgatc
     3961 gcggcggccc tgatgatgat ctcgtcattc gcggctgccc agacaaccgc cagcggcacc
     4021 ctttcagtaa cagcaacggt aaacggctcc atcaacctgg ttttcaacag tgatccagcc
     4081 ggcgttgccc tcacaggatc tggaaccaat gcggcaacgc ttgcgtttgg tacggtacag
     4141 gcctttggtg gaaccctgac gacgggcgtc acccgcacac ctgggaccac cagcttcacc
     4201 gtgagctcgc cctttgacgt gaatgtggcc aaggcgaacc ttacgagtgc gaactatacg
     4261 cttaaggccc agctgaacgc agccgatgcc acgaacacct ggcaggtggg tggagtgacc
     4321 gtgacttccg ccgcggcggc gacgatcacc ggaaccggct cttatgacac gaataacgcg
     4381 ttcactctgg cgctgaccat cccgttcacc acggcgagtg gaaccagcat cagcaactcc
     4441 cttaacttca ccgctacggc aaactaggtg taagcggtcc gaagttttgg cgtggaaaga
     4501 aaggaacgca tgaactgaag ccgggcccgg aggtgtacga atcaagctgc gacgttacct
     4561 gttatttctt gcgatcggtt cctccctcat cgccaatgga caggcgcagc gcaaggaaac
     4621 gagcaaacgc acctcggccc cggtcttcaa catgcgcgca caaacgctgg gaacgctttc
     4681 cgtgagcctg gttcccgcgc cggatggagc gccgctgagt ggcgggaatc cggcgcaacg
     4741 gagcctgaat ctcggaacgg tttcctacaa cgggctctcc accgtgccaa atgtaaccgt
     4801 caccacccaa gtggggagct ttctggtaac aacccggttt gcgatagcaa tccaggatgc
     4861 gacgcagcag gtttccgcgg ccacagttct ggtgggactt gcggctccgg aatcgttctt
     4921 tactctgcgg ctcgacagct tgacgctttc acccacgcct caggtcgtgc aagcccaggc
     4981 aaaagtggga agcacgattg aacaccgttt ggatgttcaa gtgccgacat cgctgacgga
     5041 gcgaaactcg caattgcaaa acacgctttt atttcaggtg atcgcaaact aagacgttga
     5101 acgtatgcac aaactcccct tatccaattt cctgaagctg ctgatgagct tcactgtggc
     5161 actcggttgt gccgcgcacg cgcagcttgc ccctgcgcct tcgcccagtc cggcgccgca
     5221 ggcaatccca ccgtcgattt cactaagccc ggcagtggtg atggccaaag gaagcttcgg
     5281 ccagggactt acccaggtgc tcacgctgac caacaacacc gggatggacc ttgcctttga
     5341 gttgcaggcg caggacattg tggtgaagga cggtaaacga accttcgcta cggcgggcga
     5401 gactccaaac agcatcgcgg ccacggccgt gtttacgccg aaatcggtgc tggtgaaggc
     5461 gcacaccacg gcttccgcgg aagtgcggct cacaattccg gcgaagaccg atttacgcgc
     5521 ggtctcggcc atctttatgg gcacagacaa actgcaaagt tcggcaagca atgtggccat
     5581 gacggcttcc ttggcggcgc tcattacctt caatctcacc gacaacgcga aattgcagca
     5641 ggaacccgcg cacgtgctgc ctgcgtcaga gacggccaac atgaccatcc ggcaatgggt
     5701 cgccaacgtg ggcagtgagc cggtgctgcc ggagggaacg gcggcagtgc tcaacgccaa
     5761 gggtaacctc atgggcaaga cgacatttcc gcagcagcgc ctgctcccgg gcgagcgctt
     5821 agagttcagc gccgaatatc ctgaccaact ccagccgggt gactaccgag cgctgtgctc
     5881 attccagtac gaaggcaagg tcctcacgaa taccgctgaa ttcaaggtgg atgcaaagcc
     5941 ctgatgaaag tcctttgcgg agttttgtgc ttcctggctg ccgctataac ggcgacgcaa
     6001 gggcaggctc cgctccaggt gggttaccag aagagagttg aattcgccct gagtggtgcg
     6061 agtgccgcat attctttgga cagcaacatt gcggaagctt cggctgcgaa tgggctggtg
     6121 gtgattgccg gcaaagctcc gggaacgact aacgtaatca tcgtgactca ggccggtgtg
     6181 cagacgctga ctgtgaatgt gcccatgccg gctccgatcc tgccgcccgg ttttgagccg
     6241 ccggagaacc gtttcaacgg tgaaaccggc agctatgagt tccgctacaa ctccgatccc
     6301 ggacagatca ccaactcgct ggaattccgg cgtacgcaag gggagtcatt cgatcgcctg
     6361 ctgctggtga acgcgaacct cttttcagcg ggatcttcaa cgtcgaacgt cggctttccg
     6421 ctgctctcgt acgagatcag ccgcccgaag tacgattaca ccctggtgga ccagaatgtg
     6481 gcgaattcgc ccctcacgct ggacagctac ctggtccgcg gcatgcatgc caagatcggt
     6541 gactggcagt ttcacggcgg cgctacttct atcgcgacct ttcaggggct tttcctcacc
     6601 acgcagccgg aatacgttgc cggcgtctcg cgcgatttcc ggctcgataa ccgcaatacc
     6661 gtacaggcga acttttacta cttccgcaat cccgaggaac tggcgctggt caccgcgaat
     6721 ggtcctgtag gaacgcttgc ctaccactac acagatcaca agcactcaag cctggttacg
     6781 gagtgggggt ttagccacgg ggtagccttc gctacgcgcg gcgcctacga tgatgagagg
     6841 acgcacctga acggccaagt gcgcgtgcag gggccgagct tcgcaacgct ggcagtgaac
     6901 aaccagcacg gaacgtttgc ggagttgaac ggcagccgcc agttaaattc gcggttctat
     6961 ctaagcggtg acctgaacca atcaaacttt aacctgcgga acctgcagca gaataccttt
     7021 accagcacgg cgctactgaa ttttcggatg actcgcaact ggtcgctcac tggcggcagc
     7081 gcctattcga attttcaatc gaagctgcct gcagggcctg aagttcgaac tttgaacctg
     7141 ccggttgggg tggatttctc atcgcgacat tttggttcgg gctttcagta cgaacggacg
     7201 gttaactttg aatccagcgg cggcaatgat tacgccggga acctgcgcgg ctcgttcggg
     7261 cagttcaatt ccacggcatt ttaccggcat gacgttcagg taccggcagt gtcgacaatt
     7321 ttctcgcaag ttcccgggtt gcaggacgca ctggaacggg cgggaattgt ggcgagcacg
     7381 ccagagcaac tggcagacct gctgcggaat acggcgctgc tggcggcgct tggattcacc
     7441 acacccttta ttgtggacct tgctccatcg cggaacgatt atggcgcgaa cctcacgtgg
     7501 cttggccgca gcggtcataa gcagcaactc gatctgagct acttgaacag tgacaccaaa
     7561 ctggttgtag gcggcttccg gctggaaact gcttccgcca gctatgcgca gcggttgaat
     7621 gcgaccaaca ccattgtggg cacagcgggt gtggtacgga gcacgaacaa tggtgttcag
     7681 gacacccgtc cattgtttac gcttgcgttg cagcatcgct tcaacagcgt gcccggaatg
     7741 atactgccag ggcggcacgg ggtcattgaa ggtcgtgttt ttcgcgatga cgaatcgtcc
     7801 ggagtatttg gggcaggttc tcccaccatg gcgggtattg aagtgaaatt ggacgaccag
     7861 cgggttactc gcacggacgc caacggacac tacgcctttc atcatgttcc atatggctcc
     7921 catcaggtgc aggccagcgt ggtgagcgcc gagccgttct tcttcaccac cgattcaccg
     7981 gcaacgactg acatcaacag cacggtgaac tttggaatca gctttgccaa agggcaggtg
     8041 ttcgggtttg tgcggaacga tgccggcgca ggagtgagcg gtgtaaccgt ggagatccag
     8101 ggggagaagc ttacccgccg agttcaaacc tccgggctgg gcaagttcgg ctttcccggc
     8161 ctccccgcag gcaactatac ggtgcagact gttgcggagt cgtatcctgc cggctattcg
     8221 cttcaggcgc tcgcgccgga gcaggtgcag gttgaaccag gcaaaccggc atcgatggag
     8281 tttactgtac gggcgttgcg ctcgatagca ggtcacgtga tgatttacga cacgcaaacg
     8341 ctcaaaacgg tgccgctcac gggggtgatc gtacggctgc aagagctttc tttgcagatg
     8401 aagaccggag ccgatggagc ctacctcttc cgcaatttgc cggcgggaac gtttacgatt
     8461 tcactgcaat tcgagggccg cacactggcc caacaggtgg tggtgccggc cgagcctgcc
     8521 agcatcagga atatcgacct gaacgcggga tccaagtaac gcaccggaaa ctcgctccgt
     8581 gttggaagaa cgcgaggtcc ccgctaggtc gcgacaacgt ccgcgactgt gtcagtgggc
     8641 caggtttctg tttttgtggt ttcggccagg gccgaaatgg cctcacggaa gttttctgtg
     8701 accgctgcga gcttcccctc cttcaggacc agcagcatgt cacactgctt cacggtgctt
     8761 aggcggtggg cgatgatgaa agtagtgcgg ccgcgaacca gttgctccgt cgcctgcatg
     8821 atttcctgtt cggtatgaat atccaccgcg cttgtaggtt catcgaagat cagaacaggt
     8881 gcgtctttta agaaggcgcg agcaatggcg aggcgctgac gctggccgcc ggacagacgg
     8941 cagcctccgt cgccgatcct ggtgtcatag ccatccggga gcgcggttat aaagtcgtgc
     9001 gcccgggcgg ctttggccgc ctgaatgatc tcttcgcggg tagcatcatg ccgggcgtat
     9061 gcaatgttct ccgccacagt cgcggaaaag accaccggct cctgaaggat gattgagaac
     9121 tgttgccgaa ggtcggccag gcggtactgg cgaagatcgt tgccgtcgag caggatttct
     9181 cccgagctcg gatcgtaaaa gcgggtgagc aggttgacga gagtgctctt gcccgagccg
     9241 ctgggtccaa tgattcccac gcgcgtgcct gcaggcacct ggaaggaaac accattgagc
     9301 gcgcggcctg agctcggata atcaaacatc acattgctga atcgaatgtc gccttcaacg
     9361 cggctggcgg gaatggcaaa ttccggttcc gcaacctctg gtgcttcatc catcaaggca
     9421 acggcacgat tgatgctcac gatccagctc tgcagttccg gcattttggc gctgatggtg
     9481 cgcagtggat cgtagagctg agtcatgtac gccatcacca gcagcagctc gccgagggtc
     9541 agcacgccgg tttgcacatg atgaacaccc acccacatgg ccaaggcgct gcccagcgca
     9601 atggtggtgg tgatcaggac gtggaacatc gcctgcattg aggcgacttt gacctgctcc
     9661 tgcatgcgat gtcgagaccg cagcttgaag cgctggtctt caaactgctc ctgaccgaag
     9721 gcctttacca cacgaatgga agagagcgct tcatagagga ccagcattgc cgagctgtcg
     9781 agtttcttga tgtcgtccca gccagcgcgg gcgcggcggc tcgactttcg ggcaagcacg
     9841 aacagaaccg gggagatgga aagggcaatt acggagagga cccaatcgat gcggatggtg
     9901 acgtaaagga gggcgaggaa actcagtgtg gagctgacca gcggcatcac gccctgaaga
     9961 aagatgtact gaacggcagg cgcatcattt tgaatgcggt aggcgacctc gctcgttccg
    10021 cgtttgtcgt ggaaaagcag tcccatccgc tgcacgtgcc aaaagagctg ggtacgcagg
    10081 tcaaggacga gtttctcacc cgtgtaggtc tgaagcagcc aggttgcgaa cgactgcaga
    10141 ttcagtaaca ggctgagaac gatcaggagc ccgacagcga gcaggaggat ggccggcttg
    10201 ccgggatgag cggtgtgagg gatcagccga gcgagcactt gaggcagctg ctgctggccg
    10261 atgacgttgt cgaccgcaat cttgagcgga aacgcgagca gcagggtgat gggcgctgca
    10321 atcaggttga gcaggaagat gagtgtgaga tgcggccagt aaggccgggc gatatgcagt
    10381 atcagcccga gagtggagcg cttcgcaggt tttcccggtt ccatcggcac aactacccgc
    10441 acccgaagct tcaacccttt gccaggcttt tcgtccaatc tcctgaattt ttttcgagtg
    10501 ctaagccata ctagcaactg agagcgcgag gtaagttgat gctggaaaaa gtaattcggg
    10561 gttttgctaa gggatttcca gcaggacttg ctttgatttt gtcgcttcgc tccaaaccgc
    10621 cgacgcgtcc tcgcggttcc agcgtgtgtt ctgcgcctga ggcaagcagc tcgccgcgcg
    10681 agccgggctc gctgctccgc ttcgaaccgg cgacgtatat cgctctattt aaaggatgcg
    10741 gacggctcgt tcttgtacag cttgccgcct ttcatcacaa acacaacgcg gcggaccgct
    10801 gtgatgtcct tcagcggatc gccgtcaatg gcgatgatgt ccgcctgcat gcccggagcg
    10861 atagagccga tttgagtttg catgccgagc gattccgcgg cccgggactg cgcggcaacc
    10921 aaagcatcca ttgggtcctg gccggcctgg actcgataaa tgaattcttc cgcgttgcgg
    10981 ccgtgagctc cggctactgc gtcagtaccg aagacgatct tcagctttgg ggtcgccagt
    11041 gcgtgcttaa acatttccgc gatcacaggc agcacttcct gcattttggc gaaaccctct
    11101 tcggtatagc tgccaacacc gatgaacttt tctctgttat ccaagtaatt gtggattacc
    11161 agcccgacct ggggatcgaa ataagtcccg tgttgggcca tggcgtcgag gtcctgctga
    11221 gtcgcgtaag ttccatgctc cacctgggtg cagcccgcgt tggccgcggc acgaacggcg
    11281 ctgcgataag cgtggacgag agtccggagg ccgagcccct tggcttcacc gcagatggcc
    11341 tgaagctgtt cctcactgag tgtctgtccg ccgccctggc ggatgctttt tgaggcgaag
    11401 atcttcacca ggtcggcacc atcggctttg agcttgcgaa cagtttcgcg gagctgttcg
    11461 ggagtgagtt tggggtcttc gattggctcg agagaggtga tcagtcttgg tccgggcaca
    11521 ccgccgtgag cgatggcggc gcgcaggtct ttatcttccg gattgcccac gctctgaatg
    11581 gtggtgaagc cggccatcaa ggttgcgtaa gcattggcag ctgcagccag agaagcctgg
    11641 tagggagttt cgctcttatc ttcgatccgc ccattcgggc cgaaatgcca gacgatgtgg
    11701 tcgtgaagat cgatccagcc cggcatgacc gtggcgctct ggagatcata ggtcgcgggc
    11761 gattttgaat tcggcgaaat gctctggatt ttgccgttcc tgactacaag cagaacgtca
    11821 tgcaggacgc gcccttttcc atcgaagagc gtttgcgcgt gaatggtaac ggggtgttcc
    11881 tgtgagaaag caaaaataga caagaaacag acactcaaca aagtggcgat gatggctcga
    11941 ttcatcagat ccctcggtgc gggaagcatt gtagcggatg gcggcagagt gggtggaaac
    12001 gccacatcgg ggattggatg acgtctgctc agagcaccat aaatcaacga gttaggacta
    12061 acggcgattt ggcgagcagc ttgcactctc tcacgtgtgg taagccacgt ggttacttaa
    12121 gtcgcggcac cacttgcgaa aatcgccaat cagtaacgtg gcagaatttg cgccggagat
    12181 caaatgacga ccatgaaatc aaagactgca actctactcg ccattattgt tctggctgcg
    12241 gcatgcacca ccttacccgc gcagaccaag ccggatcctt acaagggatt cgtagagtat
    12301 gaaacgttcc agggaaccgt aaactcagac agccgcttgc tcaagttgga ttccacgttc
    12361 ggatgggact tcaacaaaca ctttggggtg ttcggcggcg tgccattcta cttctcgcac
    12421 gcctcttcga ccactacggg gaccacgagc acgagcaaca gcggcattgg tgatatttat
    12481 gcgggaatgg tatttcgcgc gccgaagact ccgctgaatt atgtgggtgc tatcacggct
    12541 tcagccccaa cgggcagcac cagcaatggc ctcagcaccg gacgcgcggg cgtggatttc
    12601 agcaatcaca tctctcacgg cttttctaaa gtgactccgt tcctggacgc aggcgtgagc
    12661 aactcggttc cggattcgca gttcagcacg cgtccgttca cctcactggg cttgatcacg
    12721 cactgggaag aaggcgcgga ttatgaagtg gtaaagcaca cgtacatcgg cggttcgggg
    12781 taccagatcc tgccattcgg caaccagaag gtcttctcca agctggtggg caaaggccag
    12841 ggcggcggtg gcaccggagg cggcggtacc ggctcaggaa agaattcatt cgacaacaat
    12901 gccgtgagca gcggcagtga cctgacgcgc gaaaacggct tcaacgcctg ggtgggattc
    12961 gaaccgacgc cgctgtggcg tgcagagatt ggtgtaacac gcagcatgac gtttgacctg
    13021 accagcgtgg cattcaacct gcgattcaac gtggggcgga tgctgcgttc gcacaaaatt
    13081 tcgtaagcac gagaaaaggg aggcactacc atgaaaacca aactgttctt agctctggcg
    13141 gcgatggcca tgttcctggc cctgccggcc tttggccagc atggcggcca tggcggcggc
    13201 agcggcagca gcgggcatgg aagtgacagc atgcatgacg gcagctcgca cggaggcgac
//
LOCUS       DASQYP010000332         9627 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_54754, whole genome shotgun sequence.
ACCESSION   DASQYP010000332 DASQYP010000000
VERSION     DASQYP010000332.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 9627)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9627)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9627
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_54754"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1272)
                     /gene="rmuC"
                     /locus_tag="VE783_10765"
     CDS             complement(<1..1272)
                     /gene="rmuC"
                     /locus_tag="VE783_10765"
                     /inference="COORDINATES: protein motif:HMM:NF014680.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA recombination protein RmuC"
                     /protein_id="HYX53921.1"
                     /translation="MSLLPIVYLLLGAGAGCAIAWLVFRSNSSVLNTRLSSVQHELTL
                     ARSDAAKFTGQNAEMTKAVARLEATLAHERKANEEKVALLNRATDELREAFRALSADA
                     LKSNNQAFLELARTSLEKFQSQARGDLEMREKAVANLVGPIEESLRKVDEQIRQIENS
                     RSQAYGELSQQVRSLISTQEKLQAETGNLVKALRAPTVRGRWGEIQLRRVVEIAGMLP
                     YCDFAEQETLNTPNGRIRPDLVIKLPGGKTVIVDAKTPLAAYLDALEASNEDQRRAKL
                     TEHANQVRTHLTQLSSKGYWEQFESTPEFVVMFLPGETFFSAALEQNPTLIEYGVSLR
                     VIPASPTTLIALLKAVAYGWNQEKLARNAREISALGKELHDRLRSLATHVEGVGRNLD
                     RAVESYNKAVGSLESRVMVSARKFVELGAPVT"
     gene            complement(1656..2462)
                     /locus_tag="VE783_10770"
     CDS             complement(1656..2462)
                     /locus_tag="VE783_10770"
                     /inference="COORDINATES: protein motif:HMM:NF014566.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0071586 - CAAX-box protein processing
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II CAAX endopeptidase family protein"
                     /protein_id="HYX53922.1"
                     /translation="MENELQPLPDVPQSPSPAPLPEQVSSPSVARMIAPWWHLVLIVV
                     LLLVNSFAGAIGKKDAMAPSGSKLFLYGGTFFFELILILLIWFAIRHRGMTMRELIGG
                     RWDSFESFLLDVAIAGIFFVAASAILVGLRVALGVLDLHNTSSQIAQVKKTLGPLIPK
                     TGVEITAFIVLAVFAGLFEEIIFRGYLQRQFAALGRNVWAGIIGSAIIFGAGHGYQGN
                     RMMIVIGVYGALFGILVHLRKSLRPGMMAHAFQDAFSGIALFFFSKSGLM"
     gene            2536..3723
                     /locus_tag="VE783_10775"
     CDS             2536..3723
                     /locus_tag="VE783_10775"
                     /EC_number="2.3.1.9"
                     /inference="COORDINATES: protein motif:HMM:TIGR01930.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA C-acetyltransferase"
                     /protein_id="HYX53923.1"
                     /translation="MEDVVIISGVRTPIGKFQGSLETFSAPQLGAMVVREAVKRAKVK
                     PDQVDECIMGLVVAAGLGQNPARQAALNGGLPPTVGAMTINKVCGSGLKSVALAAQAI
                     QTGNAEIVVAGGMESMTNAPYLLPQARKGYRLGNSQIVDSVVNDGLWDIYNNYHMGMT
                     GENVAQKYGVTREQQDEFAVNSHRKAVQAWNECRFKSQVMPVELPSKKKGEPPVIFDK
                     DEGPRADTSADLLRNLKPVFKKDGTVTAGNASTMNDGGAAVVVTSAAKAKQLGAEPMV
                     HIVAQATSGIEPEWVMMAPVDGIRKIWAKTGWKPGEVDLYEINEAFSVQSVAVIKELG
                     IDPEKVNVNGGAVALGHPIGASGCRVLVTLIYELMRRNAKRGIAALCLGGGNSVAMAV
                     ERR"
     gene            complement(3772..4626)
                     /locus_tag="VE783_10780"
     CDS             complement(3772..4626)
                     /locus_tag="VE783_10780"
                     /inference="COORDINATES: protein motif:HMM:NF018894.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0035438 - cyclic-di-GMP binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PilZ domain-containing protein"
                     /protein_id="HYX53924.1"
                     /translation="MREIPSTRRKHVRYHCSGGVELRRSETSPAIFANLSDISLEGCY
                     VETVSTFPIGNEVLFVLRIGETIIRGRADVKASNHAVGMGLSFQHLSAEDQQRLEFLV
                     GTLAGTQEMRPQGQLVVAEDPIRKPAPLITTRPVPTASMTSVARPAVAAASTPARPTA
                     QSPLAQKITAAINQLNELEQEMVREQMDPRLIAQFHDSLGHLRQTTWTIQQWVELNSS
                     GADPFEVLPQLEAERMQMLKKLAHNVNADIDASSINEFTLGVSELYETILATYRRLRK
                     MLVGEAGE"
     gene            4803..6353
                     /locus_tag="VE783_10785"
     CDS             4803..6353
                     /locus_tag="VE783_10785"
                     /inference="COORDINATES: protein motif:HMM:TIGR00368.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YifB family Mg chelatase-like AAA ATPase"
                     /protein_id="HYX53925.1"
                     /translation="MLFKTQSAAVYGIDANIIEVEVDVSPNRQPDDNFQTVGLPDAAV
                     RESRQRIRAALRNCGFDVPATTITINLAPADIRKEGSGFDLPMAMGIVGAYGGLTKKE
                     LSDFVMVGELSLDGSIRGVRGALPIAIAARSKKIPNVICPEMNAREAAVVGGVNVYPV
                     KTLLDVVNLVNTGNGISPIRVDTAEMLGADVASAADFKEVRGQFTAKRALEIACAGGH
                     NILMIGPPGSGKTMLAKRIPGILPPLTFEEALETTKIHSVAGVLDANAGLVSVRPFRS
                     PHHTISDAGLIGGGIIPRPGEVSLAHNGVLFLDELPEFPRNVLEVMRQPLEDGSVSIA
                     RASMSLTFPARFMLAAAMNPCPCGYHGSAQRECPCSPTMIQRYVSKISGPLMDRIDIH
                     IDVPAVNYKELRGPEGKTESSAQIRERVIRAREVQLNRFAAAGERIYSNAQMGPRQIR
                     AYCELGTDSERMLERAMQQQGLSARAHDRILKVARTVADMDGAPQIESKHIAEAIQYR
                     TLDRTYWS"
     gene            6669..7571
                     /locus_tag="VE783_10790"
     CDS             6669..7571
                     /locus_tag="VE783_10790"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF024967.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HYX53926.1"
                     /translation="MCQKFGVSVTPRHFYWPIPDLNALTRKDWTACALSEGVNLQVER
                     QLQLLQADLLAFQAECNFSEKPAELEHQFHFNNGFFERVDAEIAYSMVRHFQPSRIVE
                     IGSGNSTRLLAAALARNREQGAPGDLIAIEPHPDAVLMRGFPGFTELIPRQVQQVPMD
                     IFTSLGPGDILFIDSSHVVAIESDVIHEYLRILPSLKPGVVIHIHDIFMPADYPEKFV
                     MTNLCFWGEQYLLEAFLSYNRAFEVLWSSSAMQFFHREALEQYFPAWVGSFERMPAGM
                     RAFTPTLDGKNVWPCSFWIQKTSA"
     gene            complement(7618..9216)
                     /locus_tag="VE783_10795"
     CDS             complement(7618..9216)
                     /locus_tag="VE783_10795"
                     /inference="COORDINATES: protein motif:HMM:NF013696.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /protein_id="HYX53927.1"
                     /translation="MSDEQLKFEDNKAELPSAGTAANKSLDRRTFLLGAAAGAASLGM
                     PRWMSAASASALFQDDLTAIRSEVTKRHTESVQRLQNWIRQPSIAAENRGMNEGCELM
                     MNMLKDAGFQQVSKVPTDGQPGVFATLDAGAPKTLGLYFMYDVKQVDPSEWSSPPFEA
                     ALVDKPGFGKVIVGRGAVNQKGPEATFLAALHAIRGAGKKIPVNFVFVAEGEEEIGSP
                     HFPQVVRRPEVQSAMKKSIGIFMPSAGQAPDGQVTMTLGAKGVIELELVSSGEKWGRG
                     PKADVHSSNKARLDSPAWHLVKALNTLVSADGNDPAIEGFAAKARPLSPAEKQMIAEA
                     ARRMNEDVAKKSLGVEHWVHDVSFEQSLELLMSRPTVNIEGLVGGYTGPGGKTILPHR
                     AVAKMDLRLVPDMTAAEALAALKAHLAKNGFSDIEVNMSGGYDPTSTPADASLIKAET
                     AVYKRLGVDPILLPRNAGSWPGYVFTGGPLKLPAGHFGMGHGSGAHAPNEYYVIESSN
                     PKVQGMDGAVMSYVEYLYEVARSA"
BASE COUNT         1990 a         2748 c         2780 g         2109 t
ORIGIN      
        1 tgtaaccggc gcccccaact ccacaaattt tctcgccgag accatgactc ggctctccag
       61 cgaacccacg gctttgttgt aagactccac ggcacgatcc agatttctgc ccacaccttc
      121 aacatgggtt gccaggctgc gaagccggtc gtgcagttct ttgccaagtg cgctgatctc
      181 gcgggcgttg cgggccagtt tttcctggtt ccagccatag gcgacggcct tgagcagggc
      241 aatgagagtt gtgggggaag ccggaatcac gcgcaggctc accccatatt caatcagcgt
      301 cgggttctgc tcgagtgcgg cgctgaagaa agtctcgccg ggcaggaaca tcaccacgaa
      361 ctccggcgtt gactcaaact gttcccaata tcctttggag ctgagctgtg taagatgcgt
      421 gcgcacctgg tttgcatgtt cggtgagctt ggcgcggcgc tggtcctcat tgctggcctc
      481 cagcgcatcc agatacgctg caagtggagt cttcgcgtcc acaatcacgg tcttgccgcc
      541 aggaagcttg atcaccagat caggacgaat cctgccgttg ggtgtgttca gtgtttcctg
      601 ctcggcaaag tcgcaataag ggagcatgcc ggcgatctcg accacgcgcc tcaactgaat
      661 ttctccccag cggccgcgga ccgtgggagc gcgcagcgcc tttaccaggt ttccggtttc
      721 agcctgaagt ttttcctgcg ttgatatgag tgagcgcacc tgctgcgaga gttcgccgta
      781 agcctggctg cgcgagtttt cgatttgccg gatttgctca tccaccttgc gcaacgattc
      841 ctcaattggc cccaccaggt tggccaccgc cttctcccgc atttccagat cgccacgcgc
      901 ctggctctgg aatttttcca ggctggtgcg ggcgagctcc aggaacgcct ggttattgct
      961 cttgagcgcg tcagcggaga gcgcgcggaa ggcctcccgc aattcgtctg ttgcccggtt
     1021 caaaagagcg accttttctt cattggcttt acgctcatgc gccagggtcg cttcaagccg
     1081 agcgacagct tttgtcatct ccgcattctg gcccgtaaac ttcgccgcgt cagaccgcgc
     1141 cagtgtgagc tcgtgttgga ccgagctcag gcgtgtattc agcacgctgg aattggaacg
     1201 gaaaaccagc cacgcgattg cgcagcccgc gccggcgccc agcaacagat aaacaatggg
     1261 gagaagactc atatggccct gagcgattct attacgagtt tgccgcaatg atctgtagat
     1321 tgggaagaat catggttcag gatggctcag ccagagaatc gcgatgccga ggtcttggga
     1381 gtgcgaggca gaaaactaag gggacgcttt tcgcgtcccc ttttggtttt ttgattcggt
     1441 gaagagcagt tattttttct tcgcgctctt cttctttgcc tttttcttag ttgccatgtg
     1501 ttctattctc cctttccatt ttcatggatg cggtctaaga agaaaaccgc aattgatgat
     1561 tgtatagagt tattgaaatt cgaagtcaag aaaaaaattg atgtcactct tggtggcacc
     1621 ccacccttgt ctcccaaaaa atcggagagg ttgtctcaca tcaacccgct cttcgagaaa
     1681 aagaacagcg cgatgccgga gaacgcatcc tgaaatgcgt gcgccatcat gcccgggcgc
     1741 aaacttttcc tgaggtgaac gagaattcca aacagagcgc catacactcc gatcacaatc
     1801 atcatgcgat taccttggta accgtgtccc gcgccgaaga tgatcgctga cccgatgatt
     1861 cctgcccaaa cgttcctgcc gagcgcagca aactggcgct gaagataacc gcgaaagatg
     1921 atttcttcga agagcccggc aaacactgcg agcacaatga acgccgtgat ttcaactccc
     1981 gtcttgggaa tcaacggccc aagggttttc ttcacctgcg cgatctgcga gctggtgttg
     2041 tgcaggtcaa ggacgccgag tgccactcgc aagccgacga ggatcgccga agccgcaaca
     2101 aaaaaaatcc ctgcaatcgc cacgtcgagc aggaagcttt caaatgaatc ccatctgccc
     2161 ccgatcaact ctcgcatggt catgccgcgg tggcggatgg caaaccagat cagcaggatc
     2221 aggatcagtt cgaaaaagaa ggtgcctcca tagaggaaca gcttgcttcc gctgggggcc
     2281 attgcgtctt ttttgccgat tgcgcctgcg aaggagttga ccagcagcag aacgacgatc
     2341 aggaccaggt gccaccaagg ggcgatcatt cgcgcgactg aaggactgct cacctgctca
     2401 ggaagtggag ccggtgaagg tgactggggg acatcaggca gcggctggag ctcgttttcc
     2461 atagggattg tgacgcgtta tcgcgccgcg tgtcatctta taatgaaagg tttggaatcg
     2521 cataaggaga tgttcatgga agacgtcgtc atcatcagtg gtgtgcgcac gccgatcggc
     2581 aaattccagg gctcgctgga gactttttcc gcgccccagc ttggcgccat ggtggtccgc
     2641 gaagcggtga agagggccaa agtgaaaccc gatcaggtgg atgagtgcat tatgggtctt
     2701 gtggtcgcgg cagggctggg acagaacccg gcgcgccagg ccgcgctcaa tggcggactg
     2761 cctcccaccg ttggtgcaat gaccatcaac aaagtttgtg gctcgggctt gaaaagcgtg
     2821 gcgctggctg cgcaggcaat ccagaccggt aatgcggaga tcgtggtggc cggtggcatg
     2881 gagtcaatga cgaacgctcc gtacctgctt cctcaggcgc gcaaaggata ccggctcggc
     2941 aattcacaaa ttgtcgactc cgtggtgaat gacggcctct gggatattta caacaactat
     3001 cacatgggaa tgaccggcga gaatgtggcg cagaagtatg gtgtgactcg cgagcaacag
     3061 gatgagtttg cggtgaattc gcaccgcaag gcggtgcagg catggaatga gtgccggttc
     3121 aagagtcagg tgatgccggt ggagcttccg tcaaaaaaga aaggcgagcc cccggtgatc
     3181 ttcgataagg atgagggtcc acgcgcagat acatccgccg acttgctgcg gaacctgaaa
     3241 cccgtattta agaaagatgg aaccgtcact gccgggaacg catctaccat gaacgacggc
     3301 ggcgcggctg ttgtcgtcac ctcggctgcg aaggcgaagc aactcggggc ggagcctatg
     3361 gtgcacattg tggcccaggc gaccagcggt attgagccgg agtgggtgat gatggcgccc
     3421 gtggacggca ttcgcaagat ttgggccaag actggatgga agcccggcga ggttgatctt
     3481 tatgagatca atgaagcttt ctcggttcag tccgttgcgg tgatcaaaga gctgggcatc
     3541 gaccctgaaa aggtgaatgt gaacggcggc gcagtggcgc tggggcatcc cattggcgcg
     3601 agcggctgcc gcgtgctggt taccttgatt tacgaactga tgcgccgcaa cgcgaagcgt
     3661 ggaatcgccg ctctgtgcct gggcggcgga aattctgtgg ccatggcggt ggaacgccgg
     3721 taaaggaaca aatttgaagc ggcggatcgg gtgctgcccg gtccgctttt tttattctcc
     3781 ggcttcgccc accagcatct tacgcaggcg ccggtaagtg gcaagaatgg tctcatagag
     3841 ctctgaaacg cccagcgtga actcgttgat gctgctggcg tcgatgtcgg cattcacgtt
     3901 gtgcgcaagc ttcttcaaca tctgcatgcg ctccgcctca agctggggca gaacctcaaa
     3961 tgggtcagcg ccactggaat tgagttccac ccattgctgg atcgtccacg tggtctggcg
     4021 caggtgtccg agcgaatcgt ggaattgcgc aatcagccgc gggtccatct gttcccggac
     4081 catctcttgt tccagttcgt ttaactggtt gatcgcggcg gtaatcttct gcgccaaagg
     4141 actctgagcg gtgggccggg ccggcgtaga cgccgcggcc acggctggtc gggcaactga
     4201 ggtcatggaa gctgtgggaa ccggacgcgt agtgatgagc ggcgctggtt ttcggattgg
     4261 atcttccgcc accaccagtt gtccctgtgg acgcatctcc tgggttcctg caagggtgcc
     4321 gaccagaaat tccagcctct gctgatcttc agcagagaga tgctgaaaag agaggcccat
     4381 tccaaccgcg tggttggaag ctttcacgtc ggcacgcccc cggatgatgg tttctccaat
     4441 gcggagcacg aacagcactt cattcccaat cgggaatgtg gagactgtct ccacgtagca
     4501 gccttccagg ctgatgtcgc tgaggttggc gaatatcgcc ggtgaggttt cactccggcg
     4561 cagctccact cccccgctgc agtggtagcg gacgtgcttt ctccgagtgg atgggatttc
     4621 gcgcataacg aaccgccctg atgattgaac tcgatactaa cccctaagtt tcagcccagc
     4681 aatggaaaca tgcacttcgg taatggtaaa agggcggtaa gttccgcctc gcttttcagt
     4741 atctggcaca gaacgcttct acaatccgcc actctcctgc tagaatctgc ctctaccctt
     4801 gtatgctctt caagacccag agcgccgctg tttatggcat cgacgcgaac atcatcgaag
     4861 ttgaagtcga tgtaagcccc aatcgccaac ccgatgacaa ctttcaaacg gtgggtttgc
     4921 ctgacgccgc cgtccgcgag agccgccaac gcattcgcgc cgccctgcgg aactgtgggt
     4981 ttgatgttcc ggcaactacg atcacgatta atttggcccc agcagatatt cgcaaagaag
     5041 gatcagggtt cgatctgcca atggccatgg gcatcgtcgg cgcctacggc ggtctcacga
     5101 aaaaagagct gagcgacttc gtgatggttg gagaactctc tctggatggc agcattcgcg
     5161 gagttcgcgg cgccttgccc attgcgattg ccgcacggtc aaagaagatc cccaacgtga
     5221 tctgtccgga aatgaacgcc cgagaagcgg ctgtggtcgg tggcgtgaat gtctatccgg
     5281 taaagacgct gcttgacgtg gtaaacctgg taaacaccgg taacggtatt tcgcccatca
     5341 gagtggacac ggccgagatg ctgggcgctg acgtggcgtc agccgccgac tttaaggagg
     5401 tgcgcggcca gtttactgcc aagcgtgctc ttgagattgc ctgcgccggt ggacacaaca
     5461 tcctcatgat cgggccgccc gggtcaggca agacgatgct ggctaagcgc atccccggca
     5521 tacttcctcc gctgaccttc gaagaagctc tcgagaccac gaagatacac agcgtggccg
     5581 gcgttctgga tgccaacgcg ggtctggtga gcgtgcggcc gtttcgctcg ccgcatcaca
     5641 ccatctccga tgccgggctg atcggcggcg gaatcattcc gcgaccggga gaggtctcgc
     5701 tcgctcacaa cggcgtcttg ttcctggatg agctaccgga gtttccgcgc aacgtactcg
     5761 aggttatgcg ccagcccctg gaagacggca gcgtctccat tgcgcgggct tccatgtcac
     5821 tgacttttcc ggcacggttc atgctggctg cggccatgaa tccctgtccc tgcgggtacc
     5881 acggttcggc gcagcgtgag tgtccatgca gcccgacgat gatccagcgg tacgtttcca
     5941 agatttccgg gccgctgatg gaccgcattg acatccatat cgatgttccc gccgtgaact
     6001 ataaggagct gcgcggaccg gaagggaaga cggagagttc ggcgcagatt cgcgaacgcg
     6061 tgattcgtgc ccgcgaagtt caacttaacc gttttgcagc cgccggagag agaatctatt
     6121 ccaacgccca aatggggccg cgccagattc gcgcctattg cgaattggga actgacagcg
     6181 agcgcatgct ggaacgcgcg atgcagcagc agggtttgag cgcccgcgct catgatcgca
     6241 ttctcaaagt cgcgcgtacc gtggcggaca tggacggagc cccgcagatc gaaagcaagc
     6301 acattgcgga ggcgatccaa tatcgcactc ttgatcgcac ctattggagc tgagccgcga
     6361 acagggactc gccttagccg gactaagtag ctcttttaca actcattcgt ctccagctgc
     6421 aaacacctgc tcacaatctg ccatctagct atgcattcgc gtgctcacct gctcgtatcg
     6481 ctggagcacg aaccagcgcc gctccgtttg aaagtcaggt cctaggagaa agtatggagc
     6541 cccggcaaag caggaaaacc accgttcaga cagtttctca gccggtcgtc gcaccggcat
     6601 cgcgccccac acgccaaccc tttacccgta ccccgcaatt ccggaacttt gcggcgcgtg
     6661 tgtttcgcat gtgccagaaa tttggagtga gcgtcactcc ccgccatttt tattggccta
     6721 ttcctgatct caatgctctt acgcgaaaag actggaccgc atgtgcgctc tctgagggtg
     6781 tgaaccttca ggtcgaaaga cagttgcagt tacttcaagc cgatctgctc gccttccagg
     6841 cggagtgtaa tttttcggaa aaaccggcag aactcgagca ccagttccat ttcaacaatg
     6901 gattttttga gcgggtcgat gccgaaatcg cctattcgat ggtgcggcat ttccagccgt
     6961 cgcgaattgt cgagatcggg agcggaaaca gcacccggct cctggcagca gctcttgctc
     7021 ggaaccgtga gcagggcgct cccggtgacc ttatcgccat tgagccgcac ccggatgctg
     7081 tattgatgcg tggctttccc gggttcactg aactcattcc ccggcaggtc cagcaggtac
     7141 ccatggatat cttcaccagc ctcgggccgg gagacattct cttcatcgac tcaagccatg
     7201 tggtggccat cgaaagtgat gtgatccacg agtacctgcg cattcttccc agcctcaagc
     7261 ccggcgtagt tatccatatt catgacattt tcatgcccgc ggactatccg gaaaaatttg
     7321 tcatgaccaa cctctgcttc tggggtgagc agtatctgct ggaggctttt ctctcttaca
     7381 accgtgcctt tgaggtcctg tggtccagca gcgccatgca gtttttccat cgtgaggccc
     7441 tggagcagta ctttcccgca tgggtgggca gttttgagcg gatgcccgcc ggcatgcggg
     7501 cgttcacccc cacgctcgat ggcaaaaacg tgtggccgtg cagcttctgg atacagaaaa
     7561 cgtctgcgta ggtgagcacg ccgtcccgga gtttcagctc cgggacggct ttggaaatca
     7621 ggcgctacgg gccacttcgt aaaggtattc cacgtaactc atcacggctc catccattcc
     7681 ctgaactttg ggattgctgg attcgatgac gtagtactcg tttggagcgt gtgcgccgct
     7741 gccgtggccc atgccgaaat gcccggccgg cagcttcaga ggcccgccgg tgaagacata
     7801 tcccggccag gaaccggcgt tgcgcggcaa tagaatcgga tctacgccca gcctcttgta
     7861 aaccgcggtt tcagctttga tcagcgaagc gtcggcgggc gtgctggtgg gatcgtagcc
     7921 gccgctcatg ttgacttcga tatcgctgaa gccgttcttc gcgaggtgcg ccttcagtgc
     7981 ggcgagggct tctgccgcag tcatgtccgg aacaagccga agatccatct tggcgacggc
     8041 ccgatggggc aggatggttt tacctcctgg gccggtgtag ccaccgacga gaccttcaat
     8101 gttcacggtc ggccgcgaca tgagcagttc aagcgactgc tcgaaactca cgtcgtgcac
     8161 ccagtgctca accccgaggc tcttcttagc gacgtcttcg ttcattcggc gcgctgcttc
     8221 cgcgatcatc tgcttctccg cgggcgagag tggccgtgct ttcgcagcga agccctcaat
     8281 ggcaggatcg ttgccatcag cggagaccag agtgttgagc gccttcacca gatgccaggc
     8341 aggcgagtcg agccgggctt tgttgctgga gtggacatcg gctttggggc cgcgtcccca
     8401 tttctcgccg ctggaaacga gttccagttc gatgacgcct ttggcgccca gggtcatcgt
     8461 gacttgccca tcgggggcct gccctgccga aggcataaag atgccaatcg actttttcat
     8521 ggcagactgc acttcaggac ggcgcacgac ctgcgggaag tgcggcgagc caatttcttc
     8581 ctcgccctcc gccacaaaga cgaagttcac tgggatcttt ttgcccgcac cacggattgc
     8641 gtgcagcgca gcgagaaaag tcgcttcagg ccctttctgg ttcaccgcgc cacgcccgac
     8701 gatcaccttg ccaaagccgg gcttatcaac caaagcggct tcaaatggtg gtgacgacca
     8761 ctcggacggg tccacctgct tcacgtcata catgaaataa agtccgagtg tttttggtgc
     8821 gccggcatcg agcgtggcaa agacaccggg ctgcccgtct gtggggacct tgctcacctg
     8881 ctgaaaaccg gcgtctttca gcatgttcat catcaactcg cagccctcgt tcatgccgcg
     8941 gttttcggcc gcaatcgaag gctggcggat ccagttctgc aggcgctgca cagattcggt
     9001 atggcgcttt gtgacttctg aacggatagc cgtcaggtca tcctgaaaca gggcagaagc
     9061 cgacgcagcg gacatccagc gcggcatacc cagcgaggcg gctccggcgg cggcgcctaa
     9121 cagaaaagtg cgacggtcca aagatttgtt cgcagcggtt ccggcgctcg gaagctctgc
     9181 tttgttgtct tcgaacttga gttgctcgtc tgacattctt ttccctccgc atgctcaata
     9241 tgcaaacggc ggattataag acagaaggag gaacagaagt gtgcggtgga gcccattccc
     9301 atgagaaatt acttaggaag aaatttgcgg gtgctctata tttctttagc ttcaaagagt
     9361 ctctatctgg aaaaggctcg atcttttttt ctcgtatggg acccctactc atcctcagct
     9421 cgctctctct cgctattgtt tcctggctct tctgggcgaa agcgctcacc ctcgctcgta
     9481 tctatgacga ggaacagagc ggcgcacaga gggttcgccc aaacagctaa gacccacccg
     9541 gtactctgac ggtggcaaag tgcgtcttaa gcgcacgggc aacgctgtgc gccacctacc
     9601 ggaacgcaga tcaacgtgct cgccacg
//
LOCUS       DASQYP010000333         6211 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_246844, whole genome shotgun sequence.
ACCESSION   DASQYP010000333 DASQYP010000000
VERSION     DASQYP010000333.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 6211)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6211)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6211
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_246844"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..423
                     /locus_tag="VE783_10800"
     CDS             <1..423
                     /locus_tag="VE783_10800"
                     /inference="COORDINATES: protein motif:HMM:TIGR02246.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HYX53928.1"
                     /translation="TALPALHAQAGNAASTQVAALVQRFIKAQQSFDPATLKETTTDD
                     YLEVSPQGEVDKREAVLGFYDPAHRVEVPATSISDENIRTFNDTAVEVVAITYKVGAA
                     GNTHDVRIRATFVALRQQGAWKLASAQYTGIKPPAPKQ"
     gene            545..1756
                     /locus_tag="VE783_10805"
     CDS             545..1756
                     /locus_tag="VE783_10805"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53929.1"
                     /translation="MSSSDRLQLVPLSTQKEGDSWLVGSVELNCFFQMPDIAVQIIRL
                     LQQGLLLSEVKAHLQAAGDGDFDLDDFAATLIEIGLAYRGDSPARTAPPVAPSARWLA
                     SAAKVGQVIFSWPGACLYLLVIGYAALCAVRAPRILPPLHVFYFPGHLTASLLLLLVF
                     YFVMVMLHEMGHMLAAARVGIDSHLGVGTRLWTIVMEADLTGVLSLPRRQRYLPLLAG
                     LVVDVLNVSILLIAVSHLMAVHASPFLIQLLQALTMQILLSMSWQGNVFLRTDLYYVL
                     CNALAYPDLDRDARLYFRSLLFMVSGGRLGVDLPEGQRPWRIAILRLFSIVWFVGRVG
                     SLYLLFAAAGPTLLRYAVDDYHALTTASAAALPWDYIIFTVLSASMLAAGIWMWLAQM
                     KSRKLTLAGQQ"
     gene            1753..3675
                     /locus_tag="VE783_10810"
     CDS             1753..3675
                     /locus_tag="VE783_10810"
                     /inference="COORDINATES: protein motif:HMM:NF024824.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HYX53930.1"
                     /translation="MITEKSISRYFELVPVTRAQGPASRELLSRSIQDAQLHHVDAGF
                     SHGFTWAGVSTFIETIYLDLLARGHNALVEKHNYELHMVLTRYRDRIPLKYGSLTDVS
                     TGTEKTRNFPLDRAYRIGHGLIDLVIEWRTITGCGQPAILIVENFSGAGHLARRFFLD
                     LARRASLKANLAVIVATEDSSIQFSRDESNLSAVSVSIPSSLRGATSEPLGMFASDEE
                     AEQCLKGLTTLEAIELNANRLLAYYKSRGESFRHAQTALLALQACNHFGYYYEASSFA
                     GAVLSEFDRLTAGSEENRWNYAGNVYHSLVVAGAVHEARNVIEHVAKPLLTKSALRAK
                     MEYVLGIIDLRHQVPPDIAGAEQHLNAGVELIRSCEGEIDQHEYAFLKVFIENGLAFL
                     RARQGRRHEAIQLCQDGYELLTRELGAEKHKLHRSVLQYNTAQVYNMMGDSEAALRHY
                     DYAIQMDPNYSEYYNEVGNIYQRLGQFDQALRFYDDAIRLSAPYPEVYFNRAICLARS
                     NDWQNALENCTYSLELKPDQPDAHLLRAEILEQLGDFGEAFISYDDAIALDGNLVAAR
                     VNKAVLLFTQGNFKQALTEMNAVIALQPGEASHYDNRAAIYTELGRPDLDQQDRRKAD
                     SLRAMGDVEAVQAAAS"
     gene            3791..>6211
                     /locus_tag="VE783_10815"
     CDS             3791..>6211
                     /locus_tag="VE783_10815"
                     /inference="COORDINATES: protein motif:HMM:TIGR03434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HYX53931.1"
                     /translation="MSSFTQDIVFGFRVLKKSPGFTVAAILLLALGIGASTAVFSLLD
                     AVLLKPLPYPEANKIVMSWNVPPANLNLGNYFPWAPLQFHAMEQETRTYQYLGAFQSD
                     TFNLSGSGEPARLDGMRVSYGFFPSLGVTPALGRIFSREEDQPGRDHEVVLSDALWRG
                     RFAASPEVIGRVIDLNGSPFTIIGVMKPGFSFPHANEMPESFEFPREAQLWVPAAIPA
                     VPPPNAPAELAVVGRLQDGVSMEQAQAAMDLFASRMDGLMPAAKGWFNSRVVPLQAQV
                     AGDTRRPLVLMLSAVLAVLLIVCFNLAALMAMRSVQRNREISIRAALGAGGYRIVRQL
                     LAEALLLSSLGAAIGLAVCVTCIYLVKHLGPSSIPRLQETGFDFRVFAFALAVTLLTT
                     LIIGIAPALGARRTNLIESLKVGGQKAAAGSSYPVFRGALVVLQVGLSLVLVVICGLL
                     VQTFRHLLNADAGFRPEHVITFEVTLPAATYPDNAHIVQFYREALPRLRAIPGAQSAA
                     ISEAVPMGGGPESTAMFIVGRVPASRKDVPMVNYTVVSPEFFTTVGTPFLRGRDFLES
                     DNESGQAVAIINQAMARRFWSDQDPMGKQIRVPSQKAPMTIVGVVADLKHTSVREPAA
                     PEVFVPFTQEVWPSLAVMHVVISSRADPDAVIGGARAAVQSLDSRLPLARVATLVSLR
                     DSALSRERFSMLLLAFFAAFSLLLAAVGIYGVISYSVRHRSREIGIRMALGATRGSVF
                     KASLGRGFQLTTLGVALGILAALAAGRWITNYLYGVKSYDPLTFAVVSIVLALVALLA
                     GVLPSYRAA"
BASE COUNT         1186 a         1772 c         1775 g         1478 t
ORIGIN      
        1 acggctctcc cggccctaca cgctcaggca gggaacgcgg catctactca ggtagcagct
       61 ttggtacagc gcttcatcaa agctcagcag tcattcgatc cggcaaccct gaaggagacc
      121 acgacggatg attaccttga agtctctcca cagggcgaag tggataagcg ggaggctgtg
      181 ttgggttttt acgatccagc gcaccgcgtc gaggtgcccg caacgtcaat aagtgatgag
      241 aatatccgga cattcaatga cacagccgtg gaagttgtgg ccatcaccta caaagtcggt
      301 gcggccggca atactcatga cgttcggatt cgggcgacgt ttgtcgcctt gaggcagcag
      361 ggtgcatgga agctggcctc cgcgcaatat accggcatca agccgcctgc gcccaagcag
      421 tagcagggca gctcgaagtg caaccaggaa gtcgtttggg aaccgaaaca ggtatttgaa
      481 ccgcatgatc actgatctcg aaccacaccg gcatgaacag aaggacgaga gagggagttc
      541 agacgtgtcc tcgtcggatc gcctgcagct ggttccctta tcgacgcaaa aggaagggga
      601 ttcctggctg gtggggagcg tcgaactgaa ctgcttcttc cagatgcccg atattgcagt
      661 gcagatcatc cgtttattgc agcaggggct cttgctttca gaagtcaagg cgcacctgca
      721 ggctgccggg gatggcgatt tcgatctcga tgacttcgcc gctaccctga ttgagattgg
      781 ccttgcttat cgaggcgatt ctccagccag gaccgcgccg cctgtcgccc catcggcgcg
      841 gtggctggcc tcggcagcca aggtgggaca ggtcatattc agttggccgg gcgcctgcct
      901 ctatctgctc gtgatcggct acgcagcact ctgcgcagtg cgggccccgc gaatccttcc
      961 tcctctgcac gtcttctatt tccccggtca ccttacagcg tcgctgctgc ttttgctggt
     1021 tttttacttt gttatggtca tgctgcatga aatgggccac atgctggcgg cggcccgcgt
     1081 gggcattgat tctcatctgg gtgtgggcac ccgcttatgg acgatcgtca tggaagccga
     1141 cctcacgggc gtcctctcgc tccccaggcg ccaaagatac ctgccgttgc tggcggggct
     1201 tgtggttgac gtattgaatg taagcattct cctgatcgcc gtttcacatc tcatggcggt
     1261 acatgcaagc ccgttcctca tccaactgct gcaggcgctg accatgcaga tactgctttc
     1321 catgtcatgg caagggaacg tatttctgcg taccgacctg tattacgttc tctgcaacgc
     1381 gcttgcctat ccggatctgg accgcgatgc ccgcctttat ttccggtcct tgttgtttat
     1441 ggtgagtgga ggccgcctcg gggtggatct gccggagggc cagcgcccct ggcgaatcgc
     1501 gattctgcgt cttttttcta ttgtgtggtt cgttggccgc gttggttcgc tctacctcct
     1561 ttttgccgcc gctggcccca ctctgcttcg ttacgctgtt gatgactatc acgcgctcac
     1621 caccgcatcg gctgctgctc ttccctggga ttacatcatt ttcacggtgc tctccgcgtc
     1681 catgctcgcg gccggcattt ggatgtggct ggcgcaaatg aaatcacgaa agcttacttt
     1741 ggcaggtcaa caatgattac agaaaagtct atctcccgtt actttgaact ggtgccggtg
     1801 acgcgtgctc aagggccggc ttcgcgcgaa ctgctctccc ggtctattca ggacgcgcag
     1861 ctgcatcacg tagacgcggg tttctcccac ggctttacct gggcgggagt ctccacattt
     1921 atagagacca tttatctcga cctgcttgcg cgcggacaca acgcacttgt cgaaaagcat
     1981 aactacgaac ttcacatggt gctcacgcga tatcgcgatc gcatcccgct gaaatacggg
     2041 tcgcttactg atgtgtccac aggcacggaa aaaacccgca attttcccct ggacagggcc
     2101 taccgtatcg gacatggatt gattgatcta gtgatcgaat ggagaacgat cactggatgc
     2161 gggcagcccg ctattctaat agtggagaac ttctccggcg cgggccacct ggcccggcgg
     2221 tttttccttg accttgcccg gcgcgcgtcg ctcaaggcga acctcgctgt gattgtagcc
     2281 acggaggatt catcaattca attcagccgt gacgaatcca acctttctgc cgtgtctgta
     2341 tccattcctt cgtctttgcg gggagcaacc tctgagccgc tcggcatgtt cgcatccgat
     2401 gaagaggccg agcaatgcct caaagggctc acaactctgg aggcaatcga gctgaacgcc
     2461 aaccggctcc ttgcgtatta caaatcccgg ggcgagtcct tccgccatgc gcaaacggct
     2521 ctcttagcgc tccaggcatg caatcatttt ggttactact atgaagccag cagctttgct
     2581 ggagcggtgc tatcggagtt tgaccggctc acggccggca gtgaagagaa ccgctggaat
     2641 tacgccggca acgtctatca cagccttgtg gtagccgggg ctgtgcacga ggcccgcaat
     2701 gtaattgagc atgtagccaa acctcttctc accaaaagcg cgctgcgcgc aaagatggaa
     2761 tatgttctcg gcatcattga ccttcgccac caggtcccgc ccgacatagc gggtgcagaa
     2821 cagcatctca acgcaggcgt ggagctcatt cgctcctgcg agggcgaaat cgatcagcac
     2881 gaatacgcct ttcttaaagt gttcattgaa aacggactgg ccttcctgcg cgccaggcag
     2941 gggcgaagac acgaggcaat ccagctctgc caggatggtt acgagctctt gacccgggaa
     3001 ctcggggccg aaaagcacaa gctgcaccgc tccgtcctcc agtacaacac ggcacaggtc
     3061 tacaacatga tgggagattc agaagcggcg ctccggcact atgactacgc catccagatg
     3121 gaccccaact attctgagta ctacaacgaa gtaggtaaca tctaccagcg tttagggcaa
     3181 ttcgatcagg cactcaggtt ctatgacgat gctatccggc tgagcgcacc ttaccctgaa
     3241 gtctatttca accgggccat atgcctggct cggtccaatg actggcaaaa tgccctcgag
     3301 aactgcactt acagcctgga actcaagccg gaccagccgg atgcgcatct gctgcgggct
     3361 gagattctgg agcagcttgg cgatttcggc gaggcattca tcagctacga cgatgccatc
     3421 gctctggacg gcaatttggt ggcggctcgc gtgaacaagg cggtgctctt gtttactcag
     3481 ggaaacttca agcaggcgct gactgaaatg aatgctgtca ttgccttgca acccggtgaa
     3541 gcgagtcatt atgacaaccg ggccgcaatc tacacggagc ttgggaggcc ggatttagac
     3601 cagcaggatc gccggaaagc tgactcactg cgggccatgg gcgatgtcga ggctgttcag
     3661 gcggcggcat cgtgagttgt gtggacggcg ggtccggaag ctataagtca aagggctggt
     3721 acatgggata taacattttt cagctaatat ctacccaagc cgccgaattt cataccgggg
     3781 ggcctcttac atgagtagct tcactcagga catcgttttc ggctttcggg tattaaagaa
     3841 gtcgcccgga tttacagtcg ccgccatcct tctgctcgct ttggggattg gggccagcac
     3901 agcagtcttc agcttgctgg acgccgttct gctcaagcca ttgccttatc cggaagccaa
     3961 caagatcgtg atgtcctgga acgttccacc ggccaatctc aatttaggga actacttccc
     4021 ctgggctccg ttgcagtttc acgccatgga gcaggagact cgcacgtacc agtaccttgg
     4081 cgcgttccag agtgacactt ttaatctcag cggctcgggt gagccagccc ggctggatgg
     4141 catgcgtgtc tcgtatggtt tctttccatc gttgggtgtg actcccgctt tgggacgcat
     4201 cttcagccga gaagaagacc agcccggtcg tgaccatgaa gttgtgctca gtgacgctct
     4261 ctggcgtggg cgctttgctg cctcgcctga agtaattggg cgcgtaattg atttgaacgg
     4321 atcgcctttc acgattattg gcgtgatgaa gcccggcttt tccttcccgc atgccaacga
     4381 gatgccggaa agttttgaat ttccgcggga agcgcagctc tgggttccgg ctgcaattcc
     4441 ggccgttccg ccccccaatg ctcctgccga actggcggtg gttgggcgat tgcaggatgg
     4501 agtctccatg gaacaggcgc aggccgccat ggatttattt gcgtcgcgca tggacgggct
     4561 catgcccgcg gctaaagggt ggttcaattc gcgtgttgtc ccattgcagg cgcaggtagc
     4621 cggcgatacc agacgtcctc tggtgcttat gctctctgcg gtcttggccg tgctgctgat
     4681 cgtgtgtttc aacctggccg ccctcatggc gatgcgatcg gtccagcgca atcgtgaaat
     4741 cagtatccgg gcagcgctgg gcgcgggagg atatcgcatt gtgcgccagc tgctggcgga
     4801 ggcgctgctg ctttcatctc tgggggctgc cataggattg gccgtatgcg tcacatgcat
     4861 ttacctggtc aaacacttgg gcccttccag cattcctcgg ctgcaggaga cgggatttga
     4921 ttttcgcgtc ttcgcctttg ctcttgcggt cactttgctt accacgctga ttattggaat
     4981 agcgcctgct cttggcgcaa gacgcaccaa cctgatcgaa tcgctcaaag tcggcggtca
     5041 aaaggcggct gcggggtcga gctacccagt gtttcgcggt gccctcgtag tgcttcaagt
     5101 gggattgtct ctggtgctgg tggtcatttg tgggctcctg gtgcagacat tccggcatct
     5161 tcttaacgct gatgccggat tccgcccgga gcacgtaatc acgtttgaag tgactcttcc
     5221 agccgcgaca tatccggaca acgcacacat tgtccagttc tatcgtgagg cgctcccgcg
     5281 tcttcgcgca attccgggcg cacagtcagc agctatttcg gaagcagtcc ccatgggcgg
     5341 cggcccggag tctacggcca tgttcatcgt cggacgtgta cccgcgagtc gaaaagacgt
     5401 tcccatggtg aactacacgg ttgtctcgcc tgaattcttc actactgtgg gtacgccctt
     5461 tttgcgcgga cgcgatttcc tggagtcgga taacgagagc ggacaggcgg tagcaatcat
     5521 caaccaggcg atggcccgcc gtttctggtc agatcaggat cccatgggca agcagatccg
     5581 cgttccgtcg caaaaagcgc ccatgacaat tgttggcgtg gtggcagacc tgaagcacac
     5641 gtcagttcgg gaacctgcag cgccggaagt ttttgtcccg ttcacccagg aggtatggcc
     5701 gtcattggcc gtcatgcatg tggtcataag cagccgggct gatcctgatg cggtgattgg
     5761 cggagcccgc gccgcggttc aatctctgga ttctcgcctg ccgttggcca gagttgcgac
     5821 tctggtttcc ctcagggatt ctgctctttc acgcgagcga ttttccatgc tattgctggc
     5881 gttctttgcc gccttctcgc tgttgctggc tgcggtggga atctatggag tcatctccta
     5941 ttctgtccgc caccgttctc gagagattgg gatccgcatg gcgctcggcg cgacccgcgg
     6001 cagtgtgttc aaggccagtt tgggccgtgg atttcagttg actactcttg gggttgcgct
     6061 gggaattttg gctgctcttg ctgccgggcg ctggatcacg aattatctct acggcgtcaa
     6121 gagctacgat ccgcttacat ttgcggtagt ttctatcgtt ctcgctctcg tagcccttct
     6181 ggccggagtc cttccctcgt accgggcggc g
//
LOCUS       DASQYP010000334         4030 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_54827, whole genome shotgun sequence.
ACCESSION   DASQYP010000334 DASQYP010000000
VERSION     DASQYP010000334.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 4030)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4030)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4030
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_54827"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..807)
                     /locus_tag="VE783_10820"
     CDS             complement(<1..807)
                     /locus_tag="VE783_10820"
                     /inference="COORDINATES: protein motif:HMM:TIGR00393.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016853 - isomerase activity [Evidence
                     IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="KpsF/GutQ family sugar-phosphate isomerase"
                     /protein_id="HYX53932.1"
                     /translation="MVRIEAEALRELSERISGPMAEDFDRAVECLQSCGGRVVVTGMG
                     KSGIVGRKIAATLSSTGTPALYLHPAEAVHGDLGMVVKGDVVLALSYSGETEEILRLL
                     ATIRRTGVKLLTITGDRLYGTNGGKRSTLAQAADVALDCSIDKEACSMGLAPTASTTA
                     MLALGDALAMSLAEKRGFKEEDFANLHPGGKLGKKLARVSQLMHSGDAVPTVERTTKM
                     PDVIYEMSRKGLGITTVVDAGRLLGVISDGDLRRLLQKRADILNLTAGDCL"
     gene            complement(930..2183)
                     /locus_tag="VE783_10825"
     CDS             complement(930..2183)
                     /locus_tag="VE783_10825"
                     /inference="COORDINATES: protein motif:HMM:NF014135.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arsenic transporter"
                     /protein_id="HYX53933.1"
                     /translation="MQLSIAATWSISILSIVLMLVRPRRLPEYVWICGGAALLLVARL
                     ISPAAALDAVLKGTDVYLFLFGMMLLAELARHEGVFDWIADLAMHHARHSRLRLFLLI
                     YLTGTVVTALLSNDATAVVLTPAVLAAVRRARVEPKPYLFACAFIANAASFVLPISNP
                     ANLVIYGRHLPMLSEWVRMFALPSVISIVATYFILQWMSWQELRGTYEPSKEEIRLTG
                     RGKLALAGLASSAAVLLSASALGRGLGAPTCVAGLLSVGLVSAKDRSVPLKVGKDVAW
                     GVLALVAGLFVMVEALSHAGLINAADAAMTWLLRQSGLVALLGSALGVAAISNVMNNL
                     PVALASGSALEHLSHAARLGHALLLGVDLGPNLSVTGSLATILWLIALRREDVHITPW
                     EFLRYGLVMMPVALLLSVLAVSIAK"
     gene            complement(2376..>4030)
                     /locus_tag="VE783_10830"
     CDS             complement(2376..>4030)
                     /locus_tag="VE783_10830"
                     /inference="COORDINATES: protein motif:HMM:NF012356.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="alpha-amylase family glycosyl hydrolase"
                     /protein_id="HYX53934.1"
                     /translation="TKVLPAGFYDYKYLVTFEDGSQRMVSDPCSRYGGKDVENQNSGF
                     VIGPSPFPDVTPLAARRPLRDLVIYELNIDDFTDELRYSSEADGGRAALDAVRGKLDY
                     LQKLGMNAILFLPWTAWADDFFSWGYTPYQYFSVEHRYTNDVTDPSPNKETNQLSRMR
                     RLISECHERGIHVIMDGVFNHVGADTSPEGSGFAYRWLYQNPDASPYVGQFGGVFGNL
                     KDLDYHNGCTQEFIRDVCFYWMDEFGIDGIRLDNTVNFYIAGDDRGLPRLLRDVADHA
                     DDENFSLTLEHIDITAAQVTNATRASSYWNNGQYETAFQSLWDYQITPKLLRVLDSHL
                     GLNDGKMATTYLTNHDHAHVAWQAGARNDDGSMEWYRTQPGAIALFTSPGVPMISNGQ
                     EFGEDHWIPENDNGSNRRVKPRPLRWEFLNDKIGSSLHELYRRLIDIRKTNPALRTDN
                     FYPSAWDENDRQFNSQGYGLDAQKQVVIYHRWGTDDHGSLQRLIVVLNFSQTDQFVDV
                     PFSSGGLWTDLLNPGISFNLSDPWQRNWKVSSNWGNIFLHQG"
BASE COUNT          845 a         1276 c         1098 g          811 t
ORIGIN      
        1 caggcaatcg cctgcagtca ggttcaggat gtccgcgcgt ttctgcagca aacgccgcag
       61 atcgccatcg ctgatcactc ccagcagccg accggcatcc accaccgtgg tgatgcccaa
      121 ccctttccgc gacatctcgt aaattacatc cggcattttc gtggtgcgtt ccaccgtggg
      181 cacggcatcg cccgagtgca tgagctgaga aacccgcgcc agcttcttgc ccagcttgcc
      241 tcccggatgc aggttggcaa aatcttcctc cttgaagccg cgtttctccg ccagggacat
      301 agccaacgca tcccccagcg cgagcattgc cgtcgttgag gctgtgggag ccagacccat
      361 ggaacacgct tctttgtcaa tggagcaatc cagagccacg tcggctgcct gggcaagcgt
      421 ggagcgcttt ccgccgttcg tgccgtagag ccggtcgccg gtaatcgtca acagcttcac
      481 gccggtgcgc cggattgttg ccagcagccg cagaatctct tccgtttcgc cgctgtagga
      541 aagcgccagc accacatctc ccttcaccac catccccagg tcgccatgca cggcttcggc
      601 tggatgaagg taaagcgcag gtgtcccagt tgagctgagc gtggcggcaa tcttccgtcc
      661 cacaatcccg ctcttgccca tgcccgtcac caccacgcgt ccaccgcagg attgcaggca
      721 ttccacggct cgatcaaagt cctccgccat ggggccagag atgcgctcgg aaagttcgcg
      781 cagcgcttcc gcttcgatgc ggaccacatt ggaaccaacg cttctcactt cgataagtat
      841 ggtagcagag cgagctttca gctctgcccc tgcaactcga ttgccattat ttcggcctgt
      901 gcgtgcaact ctcacggcaa ggtaccccat tacttcgcga tgctcactgc cagcacgctc
      961 aacagcagag cgacaggcat catcaccaaa ccgtaccgca ggaattccca cggcgtaatg
     1021 tgtacgtctt cgcgccgcag cgcgatcagc cacagaatcg tcgccaacga tcctgtcacg
     1081 gagagattcg gccccaggtc aacccccagc agcagcgcgt gccccaggcg agccgcatgc
     1141 gatagatgtt ccagagctga tccgctggcc agcgccaccg gaagattgtt cattacgttt
     1201 gagatggcgg ctacgcccag cgctgatccc aatagtgcaa ccaggccgga ctggcgtaac
     1261 agccacgtca tcgcggcatc ggctgcgttg atcagccccg cgtggctaag cgcttcaacc
     1321 atcacaaaca atcctgccac cagcgccagc actccccagg ccacgtcttt gcccactttc
     1381 agcgggaccg accggtcttt tgcactcacc agccccaccg aaagcaggcc ggccacacag
     1441 gtcggcgctc ccaggcctct tcccaacgct gacgcgctga gcaaaaccgc tgcagaagat
     1501 gccagcccgg ccagcgccag tttgccccgt cccgtgagcc gtatctcctc tttgctgggc
     1561 tcgtatgttc cacgcaactc ctgccaggac atccattgca gaatgaaata agtagccacg
     1621 atagagatca cggatggaag cgcgaacatc cgcacccatt cgcttagcat cggcagatga
     1681 cggccgtaga tgaccaggtt cgccgggttc gagattggca gcacgaaact ggctgcattg
     1741 gcgatgaacg cgcacgcgaa tagatagggc ttcggttcca cccgcgcgcg ccgtaccgcg
     1801 gccaggaccg cgggcgtaag caccaccgcg gtggcatcat tggaaagcag cgccgtgacc
     1861 actgttccag tgagataaat cagcagaaaa agccgcagcc gcgagtgacg cgcgtggtgc
     1921 attgccagat ccgcaatcca gtcaaacacg ccctcgtgtc gcgccaactc ggccagcagc
     1981 atcatgccga acagaaaaag gtaaacatct gtccctttga gcaccgcatc cagcgcagct
     2041 gccggggaga tcagccgcgc aaccagcagc agggccgcgc caccacagat ccatacatat
     2101 tccggaagcc gtcgcgggcg caccagcatg agcacaatgc tgaggattga tatgctccag
     2161 gtcgccgcga tcgaaagttg cacgctgtgg ttgttcgctc agacggaatt tttgaaggac
     2221 aatccgtcct tctcttcggg aaagcgagcg tagcgagcgt ggacggatta gctcgacgcc
     2281 ctttcatact atcaagtcgc catctggacc gccgggcaaa gaaaagcgcc gaacgcagac
     2341 cgtccggcgc ttgattgatt gctctgaaag aaacattatc cctggtgaag gaaaatgttt
     2401 ccccagttgg agctcacttt ccagttacgt tgccagggat cgctcaggtt gaagctgatt
     2461 cccgggttga gcaggtctgt ccacaagccg cccgaagaga agggaacatc cacgaactgg
     2521 tccgtttgcg agaagttcag caccacgatc aacctctgca gcgatccgtg atcgtctgtc
     2581 ccccagcggt gatagatcac cacctgtttc tgcgcgtcca gtccgtaacc ctgcgaattg
     2641 aactgccggt cgttctcgtc ccaggctgaa ggatagaaat tgtccgttcg cagtgccgga
     2701 ttcgtcttac gtatatcgat cagccgccgg tacagttcgt gcaggctgct gccgatcttg
     2761 tcgttcagga actcccagcg cagcggacgc ggcttcaccc gtcgattgct gccgttgtca
     2821 ttttccggaa tccagtggtc ttcgccgaac tcctgcccgt tgctgatcat gggcacgccc
     2881 ggggaggtga acagggcaat ggcgcctggc tgcgtgcgat accattccat ggacccatca
     2941 tcgtttcgcg cccccgcctg ccacgccacg tgagcatgat cgtggttggt gagataggtg
     3001 gttgccattt tgccatcgtt gagccccagg tgcgaatcga ggacccgcag caacttgggg
     3061 gtgatctgat aatcccagag ggattggaat gccgtctcgt actggccgtt gttccagtag
     3121 cttgaagccc gcgttgcatt ggtaacctgc gctgccgtta tgtcgatgtg ctccagcgtc
     3181 agcgagaagt tttcgtcgtc ggcgtgatcg gcaacgtctc gcagcagccg cggcaggcca
     3241 cgatcatcgc cagcgatgta gaagttcacg gtgttgtcca gccgaatgcc gtcaataccg
     3301 aactcgtcca tccagtagaa gcacacatcc cttatgaact cctgcgtgca gccattgtgg
     3361 taatcgaggt ctttcaggtt cccgaacacg ccgccgaact gccccacata cggactggcg
     3421 tccgggttct ggtacagcca gcgataagca aagccgctgc cttccggcga agtatctgcg
     3481 cccacgtgat tgaatacccc gtccatgatc acgtgaatgc cgcgttcgtg acattcactg
     3541 atcagtcgcc gcatccgcga gagctgattg gtctccttat tgggcgatgg atcagtcacg
     3601 tcattggtgt acctgtgttc gaccgagaag tactggtaag gcgtgtaacc ccagctgaag
     3661 aagtcatccg cccacgcagt ccagggcagg aacaggatgg cattcattcc gagtttctgc
     3721 agataatcca gcttcccgcg caccgcatcg agcgccgcgc gcccgccatc ggcttcactc
     3781 gaatagcgca gctcatcggt gaaatcgtca atattgagtt cgtaaatcac caggtcgcgt
     3841 aacggccttc ttgcagctaa aggtgtcacg tcaggaaacg gactggggcc tatcacgaaa
     3901 cctgagttct ggttctccac gtccttgccg ccatatcgag agcatggatc ggaaaccatg
     3961 cgttggctcc cgtcctcgaa ggtgacgaga tatttgtagt catagaagcc ggccggcagt
     4021 accttggtcc
//
LOCUS       DASQYP010000335         6848 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_82651, whole genome shotgun sequence.
ACCESSION   DASQYP010000335 DASQYP010000000
VERSION     DASQYP010000335.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 6848)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6848)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6848
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_82651"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1672)
                     /locus_tag="VE783_10835"
     CDS             complement(<1..1672)
                     /locus_tag="VE783_10835"
                     /inference="COORDINATES: protein motif:HMM:NF012711.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HYX53935.1"
                     /translation="MADARLTQPDQETDLTEAHIAVHWREEQYYYPSAKFTGQANLSD
                     PAVNERFSESNFPECFREYADLLSWDHYWHTTLDTSDAPFWQWFGGGKLNVSYNCVDR
                     HLEKHKNKAAFIFVGEPEEDAPVAITYQELYHRVNEMAALLRDFCGVKTGDRVTIHMP
                     VVPELPITMLACARLGAIHSVVFGGFSGEACGMRAADSGSKILVTIDGYYRSGNITDH
                     REKADLAVETAEKEGTKIEKVLVWRRHPGKYHSSKPMVPNRDYFVDEVLKKYSGQKVE
                     PVSMPSEAPLFLMYTSGTTGRPKGCQHGTGGYLAYVAGTSKFIQDIHPEDVYWCMADI
                     GWITGHSYIVYGPLALAATSVLFEGVPNYPDAGRPWRIAERLDVNIFHTSPTAIRMLR
                     KAGPDQPAKYNYHFKHMTTVGEPIEPEVWKWYYEVVGKNEAVIVDTWWQTETGGFLCS
                     TKPGIDPMKPGSAGPPVPGIYPAILDEEGKEVKPGSGKAGNICIRNPWPGIFQTIWGD
                     RDRFVRQYYQKYCKDKTSKDWHDWPYFAGDGAVQAPDGYFRILGRVDDV"
     gene            complement(1836..3317)
                     /locus_tag="VE783_10840"
     CDS             complement(1836..3317)
                     /locus_tag="VE783_10840"
                     /inference="COORDINATES: protein motif:HMM:NF012312.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HYX53936.1"
                     /translation="MSSASMPVTSSDVGQSKIWAVILASSVGTMIEWYDFYIFGTLAA
                     YLAPKFYPPGNQLFQYIAYLATFAVGFMVRPFGALFFGRIGDMVGRKYAFIVTLTIMG
                     GATALVGALPSYATAGWFSPIVLIVLRVLQGLALGGEYGGAAVYVAEHVPDDKRGFYT
                     SFIQITATLGLFVSIAVILGTQAAMSDADFRNWGWRIPFLASLLLVTISLYIRLQMEE
                     SPIFQQIKSAGMSSAQPLKDAFTQWPNLRQVLISLFGATAGQGVVWYTGQFFALFFMT
                     TILKVPPRDASIIVAKALLLGMPLFVFFGWLSDRIGRKKIIMAGLLLACLTYRIPGTQ
                     FGLYPAMQRAAGNNVTHVDASKNKVTGATVLTPQTRDATGKAIPAAAAINADKTKLMW
                     LVFIQLIWVTMVYGPIAAFLVESFPAKVRYTSLSLPYHIGNGVFGGLVPLVCVWIPAA
                     TGNPFDGLYYPIGIAALTFVVGSIMLRETVHVKIWTEVTQKSR"
     gene            complement(3599..5089)
                     /locus_tag="VE783_10845"
     CDS             complement(3599..5089)
                     /locus_tag="VE783_10845"
                     /EC_number="1.2.1.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR01722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0018478 - malonate-semialdehyde
                     dehydrogenase (acetylating) activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA-acylating methylmalonate-semialdehyde
                     dehydrogenase"
                     /protein_id="HYX53937.1"
                     /translation="MSTVTSTAVSVPNYVNGEWVESRASEWLDVTNPATGEVIARTPL
                     SSSAEVAHAVETAAKAFPAWRRTPPEDRIQYLFKLKTLLEEHLEDLARIITQENGKTL
                     GESKGELRRAIENVEVACGIPMMMQGYNLEDVARGIDETMIRQPLGVVAAITPFNFPG
                     MIPFWFLPYAIACGNTFLLKPSERVPLTMRRAMELLEQTGLPKGVVNIINGGKEVVNA
                     LIDHPHVRAISFVGSTPVARHVYARAGERGKRAQCQGGAKNHVIVLPDADMDMTTQII
                     SDSAFGCAGQRCLAVSVAVTIGEAQKTFRDSIQSAAGSLKVGNGLDSGVQMGPVITEA
                     SKARIEALVDSGLKQGGKIILDGRKASVPKYEKGSFVKPTIIDDLPATSELTDTEIFG
                     PVLSLVHAKNMDEALAFLGRSAFGNQASLFTSSGSAARQFRYEAPAGNIGINIGVAAP
                     MAYFPFSGWKDSFFGVLHGQGRDGVEFYTEKKVVVERWAREHSRKF"
     gene            5388..6617
                     /locus_tag="VE783_10850"
     CDS             5388..6617
                     /locus_tag="VE783_10850"
                     /inference="COORDINATES: protein motif:HMM:NF024850.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter substrate-binding
                     protein"
                     /protein_id="HYX53938.1"
                     /translation="MRNRSLTYLFRGVALALFVCSGLIVAAAQDSITIGVVLPITGRE
                     GKPGQYQKEGVELAIKQINDTGGLQLKGKKVQVKEVFYDDGSDSAKSSSLCERAMSSD
                     KVTAVIGGYSTALGEPESVMPDRYQTPWITPGAAATSIFSKGFKYTFGTLSPVLLLGS
                     TTGEFLGSLVDSGKLKKGLKVALAVENTDHGADYVNGFKEWNDKHPGYFSIVMNEKFE
                     LGGTDFSGLLLKLKTAKADIFLSDAHLQDYITMQRQYLQAGLHHQVVSYGARGPEADA
                     RKALGAGTDYIVAGIWWSDKLPYPQVKKFIDDYKQFTGRNPDSWYAATAYDAMRILAA
                     AIQKAGSADKKAIRDALASTTLKDSLLPGGTLKFAANGQADYPFVIVQNKPGDKVDIV
                     FPKSAATGEAIAPAPGH"
     gene            6634..>6848
                     /locus_tag="VE783_10855"
     CDS             6634..>6848
                     /locus_tag="VE783_10855"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53939.1"
                     /translation="MTAVDFLNLLIAAFLLAGIYAAMSVGMTIIYGVMKIVNLAHAGF
                     LMLGAYFAFELFERFHLDPIIGAVLALP"
BASE COUNT         1493 a         1973 c         1854 g         1528 t
ORIGIN      
        1 tcacatcatc cacgcgccca aggatgcgga aatagccatc gggggcttgc acggcaccgt
       61 cgccggcgaa gtacggccaa tcatgccagt ctttgctggt cttgtctttg caatacttct
      121 ggtaatactg ccggacaaag cgatcgcgat cgccccagat ggtctggaag attcccggcc
      181 acggatttcg aatgcagatg ttccctgcct tccccgatcc aggcttcacc tctttgcctt
      241 cctcatccag aatcgcagga taaattcccg gtaccggcgg tccagcactt cccggcttca
      301 tgggatcgat ccccggcttg gtgctgcaga ggaagccccc cgtttccgtc tgccaccagg
      361 tatccacgat tacagcttca ttcttgccca ctacttcgta ataccacttc cagacttccg
      421 gctcgatcgg ctcgcccacc gtcgtcatgt gcttgaagtg atagttgtac ttggcaggtt
      481 ggtcaggacc ggctttgcgc aacatgcgga tcgccgtcgg agacgtatgg aagatattta
      541 cgtccaatcg ttcagcgatg cgccacgggc gaccggcgtc cggataattc gggacacctt
      601 caaaaagcac actcgtcgct gccaacgcaa gcggcccgta aacgatataa gagtgtccgg
      661 tgatccagcc gatatccgcc atgcaccaat acacgtcttc aggatgaatg tcctgtatga
      721 actttgaagt ccctgctacg taggccagat agccgccagt tccatgctgg cagccctttg
      781 gacgcccggt agtgccgctg gtatacataa ggaaaagcgg tgcttcggaa ggcatggaga
      841 ccggctcaac cttctgcccg gaatacttct tcagcacttc atcgacaaaa taatcgcggt
      901 tgggcaccat cggtttggag gaatgatatt tgcccggatg gcggcgccag accagcactt
      961 tttcgatctt tgtaccttcc ttctccgcgg tctcaacggc cagatctgcc ttctcacgat
     1021 gatccgtaat gttgccgctg cgataatagc cgtctatcgt gaccaggatc ttgcttcccg
     1081 aatccgcggc gcgcattccg caggcctcgc cactgaatcc tccgaacacc acggagtgaa
     1141 tggcgcccag gcgcgcgcaa gccagcatag ttatcggcaa ctcgggaacc accggcatgt
     1201 ggatcgtcac acggtcgccg gttttcacgc cgcagaagtc tcgcagcagt gccgccattt
     1261 cgtttacgcg gtgatagagt tcctggtaag taatcgcgac cggcgcatct tcttccggtt
     1321 cccctacaaa tatgaatgcg gctttgttct tgtgcttctc cagatggcgg tcaacacagt
     1381 tgtagctcac gttgagcttg ccgccgccga accattgcca gaatggggca tcgctcgtat
     1441 cgagcgtggt atgccagtaa tggtcccagc tcagcaggtc ggcatattca cggaagcact
     1501 cgggaaaatt actttcgctg aagcgttcgt tgacggcagg atcagaaaga tttgcctggc
     1561 cggtaaattt agcactcgga tagtaatact gctcttcgcg ccagtggact gcgatatgag
     1621 cttcagtaag atcggtttcc tggtcgggtt gggttaagcg agcgtcagcc atttttcttg
     1681 acctctctat tcgaactcga agttttcgaa ctcgaagggg cccgcagggg ggtgagccgc
     1741 aatgataagg cgggtggcgt gccgccaccc gctgttcgaa acagattaat cctacacctc
     1801 agcagcactt gtgccgcaag cgacgcagaa aagagttacc gcgatttctg cgtgacttcc
     1861 gtccatatct tcacgtgcac agtctctctc aacatgatcg agccgaccac aaatgtgagc
     1921 gcggcgatgc cgatcgggta gtacagcccg tcgaacgggt ttcctgttgc ggctggaatc
     1981 cagacgcata ccagcggcac tagtcctcca aagacgccgt tgcctatgtg gtatggcaat
     2041 gacaatgacg tgtaacggac tttagccggg aatgactcca ccagaaaagc agcgatcggt
     2101 ccgtagacca tggttaccca gatcaactgg atgaatacca gccacataag cttggtctta
     2161 tccgcgttta tggccgccgc ggccggaatc gctttgccgg ttgcatctct ggtttggggc
     2221 gtaagaacgg ttgctcctgt caccttgttc ttgcttgcat ccacgtgggt cacattgttg
     2281 cccgcggcac gctgcatcgc gggataaagc ccaaattgtg ttcctggaat gcggtacgtg
     2341 aggcacgcca gcagcagacc ggccatgatg atcttcttgc gcccaatcct gtctgagagc
     2401 cacccgaaaa agacaaagag cggcataccg agcagcagcg cctttgcaac gatgatgctg
     2461 gcatcgcgcg gcggcacttt gagaatagtt gtcatgaaga acaaagcgaa gaactggcct
     2521 gtgtaccaga ccacgccctg tccggcagtg gcgccgaaca atgagatgag cacctgcctc
     2581 aggttcggcc actgtgtgaa tgcgtctttg agaggctgcg ctgagctcat accggcgctt
     2641 ttgatctgct gaaaaatggg ggactcctcc atctgcaagc ggatgtagag cgagatggtc
     2701 accagcagca atgaggccag gaacggaata cgccagcccc agttcctgaa gtcggcatca
     2761 ctcatggccg cctgcgtccc aaggatcacc gcgattgaga cgaacagacc gagcgttgct
     2821 gtaatctgaa taaagctggt gtaaaagcca cgtttgtcgt ctggaacgtg ttccgccacg
     2881 tatactgcgg cgccgccata ttcgccacca agcgccaggc cctgaagtac gcggagcacg
     2941 atcaaaacga tcggagagaa ccagccggca gtcgcatagc tcggcaatgc acctacgaga
     3001 gccgtagcgc cgcccatgat cgtcagggtc acgataaaag catacttgcg gccgaccatg
     3061 tcaccgatgc gaccaaagaa gagagctcca aaaggccgga ccatgaaccc taccgcgaac
     3121 gtggccagat acgcgatata ttggaatagt tgattgccgg gtggataaaa cttgggtgcc
     3181 agataggcgg ccaaagtgcc gaagatatag aagtcgtacc attcgatcat ggttccgact
     3241 gaggatgcca gaataaccgc ccagattttg gattgtccga catctgaaga cgtgactggc
     3301 atggaagcgc tagacattgt ggccctcctg gaaaggtaga cagaccggcc agggtctgac
     3361 tccacttaaa tttgttcact ctagcctgtt cgctgcgtcc cggggaacaa tctccagagc
     3421 attcttgccg cgcggtttca cgccggacgc cgcaggtcct ctccttaatt cgagtgggaa
     3481 gaggacagct ctttacattt gggagacaag agtagtcgga ttatgaatat tgtcaagggc
     3541 aaagcgcaaa acaggtgctt cccggcatac tgttctcacc cctgcacagt taagaccttc
     3601 aaaactttcg cgagtgctcc ctggcccagc gctccaccac aacctttttc tcggtgtaga
     3661 actccacccc gtccctgccc tgcccgtgaa ggaccccgaa gaagctgtct ttccagccgc
     3721 tgaaggggaa ataagccatc ggcgcggcca ccccgatatt gataccgatg tttccggccg
     3781 gagcttcata acggaactgc cttgcggctg aaccgctcga cgtgaacaat gaggcctggt
     3841 taccgaacgc actgcggccg aggaaagcca gtgcctcatc catgtttttg gcatgaacaa
     3901 ggctcaggac tggcccgaat atctctgtat cggtgagttc gctggttgct ggaagatcgt
     3961 caataatggt cggcttcaca aagctgccct tttcgtactt aggcacactc gctttgcgac
     4021 catccaggat tatctttcca ccctgtttca aacctgaatc cacaagcgct tcaatcctcg
     4081 ctttgctggc ctcggtgatc accggaccca tctgcacgcc agagtcgagc ccattgccga
     4141 ctttgagaga accagctgct gactggatcg agtcgcgaaa cgtcttctgc gcttctccga
     4201 tcgtcaccgc aaccgacact gccaggcagc gctggcctgc gcagccaaaa gcgctatcac
     4261 taatgatctg ggtggtcata tccatgtccg catcgggcag aacgatcaca tggttcttgg
     4321 cgccaccctg gcactgtgca cgctttcctc tttcacccgc tcgcgcgtag acatggcggg
     4381 caacgggagt agagcccaca aagctgatcg cccgaacgtg cggatgatcg atcagcgcgt
     4441 tcaccacctc cttgccgcca ttgatgatgt tcaccacacc tttgggcaag ccggtctgct
     4501 ccagcaattc catggctcgc cgcatggtta acgggacccg ttcagagggc ttaaggagga
     4561 acgtgttgcc gcaggcaatc gcgtacggca gaaaccagaa aggaatcatg ccggggaaat
     4621 tgaagggcgt aattgccgcc acgacaccca acggttgccg aatcattgtc tcgtcaatgc
     4681 ctcgcgccac atcttccagg ttgtagccct gcatcatcat cggaatgccg catgcgacct
     4741 caacgttctc aatcgcacgc cgcagctcgc ctttcgattc gcccagcgtc ttcccgtttt
     4801 cctgggtgat gatccgcgcc agatcctcga ggtgttcctc aagaagcgtt ttgagcttga
     4861 agagatactg gatgcgatcc tctggcggag ttctccgcca cgctgggaaa gcctttgcgg
     4921 cggtttccac ggcatgtgca acttcggccg aggatgaaag cggcgtacgc gcgatgactt
     4981 cgccagtcgc aggatttgtt acatccagcc attcgctggc acgggattca acccactctc
     5041 cattgacgta attcgggaca gatactgccg tgctggtgac agtgctcatg gctctcccag
     5101 ggttcgcttc cgcctcgggt gggcagagaa ggaattggaa cattgcgttc caatacgcct
     5161 attgaaacac attcttcatt cgcatgctcg tgtacggctg cttgccgcgg gatgtgcatc
     5221 acaaggccag tgtgattgct ggaatgcgct aggatacgcc aggtggtcga aagcacttgt
     5281 tagaagcggc tccgggcttt atgatgcgtg acattctgtt gtgccgcttg cgcagatcat
     5341 ctcaggctgc gagttgtttt tcagaaagtc tcatcaagga gctggcaatg aggaatcgtt
     5401 ctctcacgta tctttttcgc ggggtagctc tggccctttt cgtttgttcc ggtctgatcg
     5461 ttgccgctgc tcaggattcc atcaccatcg gtgtggtgct gcccatcact ggtcgcgaag
     5521 gaaagcccgg tcagtatcaa aaggaaggcg tggagctcgc catcaagcag atcaatgata
     5581 ccggcggcct tcagctgaaa gggaagaaag tgcaggtaaa ggaagtcttc tatgacgatg
     5641 gctccgattc agccaagtcg tcttcccttt gcgagcgggc gatgagctcc gacaaagtca
     5701 ccgctgtcat cggcggctac tctacggcac tcggtgagcc cgagtctgtg atgccggacc
     5761 gctatcagac cccgtggatc acccctggcg ccgccgccac ctctatcttc agcaaaggct
     5821 tcaaatacac attcggcact ctgagcccag tgctgctgct tggttcaacc acgggagaat
     5881 tccttgggag cctggtggat tccggaaagc tgaagaaggg attgaaagtc gctctggcag
     5941 tggaaaacac cgatcacggc gctgactatg taaacggctt caaggagtgg aatgacaagc
     6001 atcccggcta tttctccatc gtgatgaacg agaaattcga actcggcggc actgatttct
     6061 ccggacttct gctcaagctc aagactgcca aagccgatat ttttctttcc gacgctcacc
     6121 ttcaggatta catcaccatg caacgccagt atctgcaggc gggcctgcat catcaggtag
     6181 tcagctacgg cgcgcgtggt ccggaagctg acgcacgcaa ggcgctgggc gctggaactg
     6241 attacatcgt ggcgggcatc tggtggtcag acaagctgcc ctatcctcaa gtgaagaagt
     6301 tcattgacga ttacaagcag ttcaccggcc gcaaccctga ttcctggtac gccgccaccg
     6361 cctacgacgc catgcgcatt cttgcggctg caatccagaa agctggcagc gctgacaaga
     6421 aagccattcg tgacgcgctc gcgtcgacga cgctgaaaga ttctctgctt ccgggcggga
     6481 cgcttaaatt cgccgccaat ggacaggctg actatccatt cgtgatcgtt cagaataagc
     6541 cgggagacaa ggtggacatc gtttttccga aaagtgctgc cacgggcgag gcaatcgccc
     6601 cggcccctgg acattgattc gcaagcctag ccgatgactg ccgtagactt cctcaacctg
     6661 ctgatcgcgg ccttcctgct ggcgggcatc tatgccgcca tgtcagtagg catgacgatc
     6721 atctacggcg tcatgaaaat tgtgaacctc gctcatgcgg ggttcctgat gctgggggcg
     6781 tatttcgctt ttgagctgtt cgagcggttt cacctggatc ccatcatcgg ggcggtcctt
     6841 gcgttgcc
//
LOCUS       DASQYP010000336        14306 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_96920, whole genome shotgun sequence.
ACCESSION   DASQYP010000336 DASQYP010000000
VERSION     DASQYP010000336.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 14306)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14306)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14306
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_96920"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..430
                     /locus_tag="VE783_10860"
     CDS             <1..430
                     /locus_tag="VE783_10860"
                     /inference="COORDINATES: protein motif:HMM:NF013527.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="5'-3' exonuclease H3TH domain-containing
                     protein"
                     /protein_id="HYX53940.1"
                     /translation="RVDRVIICTPDKDLGQVVSGERIVQLHRRTGVTLDENGVQQKFG
                     VPPQSIPDYLALVGDSADGYPGLKGWGAKSSAAVLARFGHLEAVPKDYKDWGVKVTNV
                     SALSATLAREFDNALLFRRLATLRTDLPLFEDVEEMRFQQ"
     gene            complement(486..686)
                     /locus_tag="VE783_10865"
     CDS             complement(486..686)
                     /locus_tag="VE783_10865"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53941.1"
                     /translation="MAQNSRPTQAKRQRERARQEKMQEKLQKRAQRKQEQENPPAERD
                     GKPLEVTYDEEGQPQGFDFHDF"
     gene            complement(749..1006)
                     /locus_tag="VE783_10870"
     CDS             complement(749..1006)
                     /locus_tag="VE783_10870"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53942.1"
                     /translation="MHQGPWGTARRFRRNQQAKDRTVALRTVICAQCDERFTISHADH
                     AQDVDLAQRQAAWLEQQLVWDHIQERKHQGLFQLPAGDELK"
     gene            complement(1006..1326)
                     /locus_tag="VE783_10875"
     CDS             complement(1006..1326)
                     /locus_tag="VE783_10875"
                     /inference="COORDINATES: protein motif:HMM:NF012305.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-binding protein"
                     /protein_id="HYX53943.1"
                     /translation="MKKIFVGNFSFSTNEDELRSWFEPFGQVDSVAVVTDKFTGRSRG
                     FGFVEMSNDGEADKAIEGLNGKQVGGRQLNVNEARPKTGGGGRGGSRDDYRGHARQPR
                     EPRW"
     gene            complement(1508..1915)
                     /locus_tag="VE783_10880"
     CDS             complement(1508..1915)
                     /locus_tag="VE783_10880"
                     /EC_number="3.1.26.4"
                     /inference="COORDINATES: protein motif:HMM:NF012304.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease HI family protein"
                     /protein_id="HYX53944.1"
                     /translation="MSVFTAYVDGGSHGSPGPSGIGVVIEKPDGGLVRIAKWIGHQDN
                     NVAEYAALLEALQQALEMKATALQVFTDSQLVVKQMTGEYHCRSPRLYSLNWTCRKLA
                     RSLKFAISHIPRHHNQEANRLANQAARQQAQPV"
     gene            complement(2807..3205)
                     /locus_tag="VE783_10885"
     CDS             complement(2807..3205)
                     /locus_tag="VE783_10885"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53945.1"
                     /translation="MAEPYRVFVVLHRDYGHALVELSQKGPVWIVDTPENRRVAQQIW
                     AANPDASHLEGVTAFKFVESSSSDDILINELETIDLHHGSDSADPPYTVLEVLGTRIT
                     PRLKHELSQFGFNEFLETAEGFRAVRPIES"
     gene            complement(3217..4143)
                     /locus_tag="VE783_10890"
     CDS             complement(3217..4143)
                     /locus_tag="VE783_10890"
                     /inference="COORDINATES: protein motif:HMM:NF023568.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HYX53946.1"
                     /translation="MKESTFLITGADGVEIFVYRWQTEATPIGVVQIAHGMAEHAARY
                     ARLAEKLNEDGYAVYASDLRGHGRTAKNPEDLGFFGVKNGWRLCAEDLWRVNRRIAEE
                     NPRLPIILLGHSMGALLARQLMRNHGQSFAAVVLSGSNGQPTPMALAGRAITRAEKLR
                     LGARGKSKLIQSLTFDTFNKRFEPARTRFDWLSRDPAEVNKYVADPLCGFNPSVQLWI
                     DMLDAWAAIAGDDRVSGAPRDLPIYVISGERDPVSAGTKMLTPMLEQYRKSGLTRVEH
                     KFYPEARHELLNETNREEVTKELLEWMNRVIG"
     gene            4434..5615
                     /locus_tag="VE783_10895"
     CDS             4434..5615
                     /locus_tag="VE783_10895"
                     /inference="COORDINATES: protein motif:HMM:NF018884.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016791 - phosphatase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SpoIIE family protein phosphatase"
                     /protein_id="HYX53947.1"
                     /translation="MISARDPMAQAVTLIHGFTSRPRVLVAEDQEDVIAALRLLLKNN
                     GYDVDFVKSPAEALQALALGGFDAVLLDLNYTRDTTSGTEGLELLSRVQALDDTLAVV
                     AMTAWGSVELAVKAMHRGACDFVQKPWDNAHLLEVLEEQLTRSRTLRQKRFREQLEQQ
                     EAAQIQRALMPGEIAAYHGLTIAASSQSARTVGGDYYDVLRLDEHRSAVCIADVVGKG
                     MAAALLMSNLQAAVRMISAEAAEPASVCERLNRVVFANNVPGKFITFFYCVIDPVSRV
                     LTYTNAGHNWPVLAHADGSCTRLRTDDLVLGATREWMYHQGQEQLRPGDRLVLFTDGI
                     TESANEEGCEFGEDQLCRLVSVNVHRSASDLKARLTEELRAHSTSELADDATLIVAAL
                     D"
     gene            5774..6046
                     /locus_tag="VE783_10900"
     CDS             5774..6046
                     /locus_tag="VE783_10900"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53948.1"
                     /translation="MKRRSPVTNLPLENRPLTIDEVRIVADLRVMHSKVDELYQVVNN
                     LKRRHHEDAIKAYADREVLDEDIRRADEIYLWFVALKEPARGLKLG"
     gene            complement(6190..6777)
                     /locus_tag="VE783_10905"
     CDS             complement(6190..6777)
                     /locus_tag="VE783_10905"
                     /inference="COORDINATES: protein motif:HMM:NF017758.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF892 family protein"
                     /protein_id="HYX53949.1"
                     /translation="MVETAHELFLHGLSDVLDAERQLVEALSQQAESAGNEQLKKAFE
                     NHLKQTQGQVERLEQVFEQLEEEAQDTDCRGMQGLIEEVDNFKQEQPSPDILDVFLVG
                     AAAKVESYEIRAYEELIQLATDMDHKKAVRLLQQNLREEQQTLKKMEGFAKKIKPERS
                     GMEEEEIEEKGQEDRQNSRNRKGSSSSRGKSRKAA"
     gene            6852..9599
                     /locus_tag="VE783_10910"
     CDS             6852..9599
                     /locus_tag="VE783_10910"
                     /inference="COORDINATES: protein motif:HMM:NF012711.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HYX53950.1"
                     /translation="MHGFYDCFLKSVEKFPDHVAAELQHVSGPVESYTYAELRRMGES
                     IGRWLRESGMSEGVRCAIMASNGPLWVASYLGAMSAGAVAVPLDTAFNFHQVNKLLWD
                     CGASIIFTDAKHLPVVEKAVDETLVRIVMIDGSGEGKYSNLLGMFAAGPGSFTPGVVK
                     SDDLAVIMYTSGTTSDPKGVMLTHGNLLAEADAVFGFIHISEKDAILGVLPLFHALAQ
                     MANLLLPFAAGARIVYLEEMNTTELLRALSERNVTLFCCVPQFFYLIHERVMQEVKKR
                     SWAARAAFRSMMGLSGAARKLHINLGKLFFGRVHRLLGPKMRYLITGGSAFDPSIGRD
                     LQKLGFNALQAYGLTETSGGAFCTKPDLNVMGSVGNPLPGVQVKLVDPQQADGIPYPV
                     GEVAIAGAIVMKGYYNRPDATAEAIKEGWLHSGDLGYLDPRGILFITGRKKEIIVLSS
                     GKNIYPEEIEAHYLKSPFIKEICVMGLVNRPGEPFSERLHAVIVPNFDVLREKKIVNA
                     GEVIRFDVENLSVELPSTKRILSFDLWPDPLPRTTTRKLKRFEIQRRVMAGERTASST
                     GAPVAEEPSAEEAIWLAQPDVQRAVAVIREASKAQKPIHPSSNLELDLGFDSMERVEL
                     VVALERELGAEADDKVISQVYTVRELVDAILQAHSGAAVGSRPSLPGWDAVLAAEPDD
                     RRVLAPLHSSIVFAFLWFVLVKIVGVITRIFFRLSVSGKEKLPRNGPFILSPNHQSFL
                     DGPVVVSQIPWRLYKNMFYVGTSEIFGEGFFRWIASTLKLVPVDPDSNLVNAMRAGAY
                     GLKQGRNLVLYPEGERSIDGTPKKFKKGAAILSAHLKVPIVPVALEGFYDAWPRSRKL
                     PRLAKLRVRFGDPILPPASLQNPEEVYRQVTEKLRNTVVEMWESMRDKQPQPGAAAAA
                     D"
     gene            9699..10625
                     /locus_tag="VE783_10915"
     CDS             9699..10625
                     /locus_tag="VE783_10915"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53951.1"
                     /translation="MPRFVSLAVLSVLLGTISLSGQDPSVQKAIKEGKACVVIVNSSP
                     TGASILIDGSPAIQPAAQMNGLTPAMFTLFKKDLPRVITIQKDGYKPLTRSVDPTGAP
                     VALEVSLEPLQAASSSASTSALVPVGVTRSGSSAAVPSPFGFRYGASKSEVLKDLGPK
                     AVVKTRASSVTLNTAPTPHPDFEFYTLFFSPQKGLLKVSAASHDVESADDGSELRATF
                     SRLKSALEAKYGAAKILDNCKGSEVACEPQFFMMQLMEKNRTLFALWESPAIVLEVKA
                     LGIRKGYVTLDYEFPGWDEFVDNVEQKKDSVF"
     gene            10984..11478
                     /locus_tag="VE783_10920"
     CDS             10984..11478
                     /locus_tag="VE783_10920"
                     /inference="COORDINATES: protein motif:HMM:TIGR00377.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043856 - anti-sigma factor antagonist
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="STAS domain-containing protein"
                     /protein_id="HYX53952.1"
                     /translation="MAGLTNTELGKKISESLSLLPFSNVYLCSNGKGEVMLSLNIHHL
                     GEVAVFECSGRITAEDSSGLRSAVLAQTDGHMVVLDLKEVSQIDAAGLGVLVGLRNWA
                     QNSGKELKLMNVMPRVERVMEITRLRSVFSICSAREMLDLWCRAIHSGVCSASAPYKL
                     AASF"
     gene            11564..12046
                     /locus_tag="VE783_10925"
     CDS             11564..12046
                     /locus_tag="VE783_10925"
                     /EC_number="3.5.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013228.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HYX53953.1"
                     /translation="MKIKSLAILAFVMASCAFVYAQTEFPKPEGLAPGTGYSHVVVTS
                     PGRLVFIAGQVARDAKGNLVGKDDLKAQTEQVFANLKTALAAAGATLDDVVKLNWYVK
                     GYKTEYLPPIREVRDRYVSKIHPPASTLAGVAALANDEYLIEVEAVAALPGKKARGKK
                     "
     gene            complement(12068..12649)
                     /locus_tag="VE783_10930"
     CDS             complement(12068..12649)
                     /locus_tag="VE783_10930"
                     /inference="COORDINATES: protein motif:HMM:NF012655.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HYX53954.1"
                     /translation="MSGKKTAKKKKPDRRVKRTREVLGDALVGLMQEKTFESIKVEEV
                     LDRADVGRSTFYSHYRDKDDLFLSDVDEFWEGMASWLERKGEKSRRMAPLAELLSHVG
                     TAQTFYQALVASGKVGDVMELGRGHFRRSIERRLHQLEPKLERERVAILASAFTGAMF
                     ELMDRWVRHEITGSPAEIDGIFHEIVWSGIPKT"
     gene            12732..13394
                     /locus_tag="VE783_10935"
     CDS             12732..13394
                     /locus_tag="VE783_10935"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53955.1"
                     /translation="MNDNRLSAIALIAGSAGLIITMAFHPTGHDFFVPGQLEHAIRIN
                     MAVHSLALASMPISFLGALGLSLFLNSSNRLAMCALVCYGVAEIAGMNAGICSGFVAS
                     RMAQLSAAATGATSDAWKLALRYTGELNQAFAPVLVVATSVALILWSCAILRSAKGMR
                     ALAIYGLVIGSLTIIGVSSGHVRLNVHGFGVVVLTQSIWFVLMGVRLWNADAAKGARE
                     GA"
     gene            13756..14115
                     /locus_tag="VE783_10940"
     CDS             13756..14115
                     /locus_tag="VE783_10940"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53956.1"
                     /translation="MKTVTLYRPVGQKELELIAASGWKEFPPRLPDQPIFYPVLNREY
                     AEQIARDWNTHDERSGFIGHVLGFDIDAEYLNRFQLQKVGGREHLEYWIPVEQLAEFN
                     CHMVGLIRKIATFIRKS"
     gene            complement(14122..>14306)
                     /locus_tag="VE783_10945"
     CDS             complement(14122..>14306)
                     /locus_tag="VE783_10945"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53957.1"
                     /translation="HSRRALSIFRKKLPQHHWSVAAALDPDVFGTHWWQHREWAKMTF
                     LEWLKTLWWDGVDRWR"
BASE COUNT         3000 a         4009 c         4091 g         3206 t
ORIGIN      
        1 gcgcgtcgat cgagtaatca tctgcacgcc agacaaagat ctgggccagg tcgtgagcgg
       61 cgagcggatt gttcagctgc atcggcgaac cggagtgacg ctggacgaaa acggcgtgca
      121 gcagaagttt ggcgttcccc cgcagtcaat cccggattat ctggcgctgg tgggcgactc
      181 cgccgacggc tatcccggcc ttaaaggctg gggcgcgaag tcttcagcgg cggtgctggc
      241 ccggttcggt catctggaag cggtgccaaa agattacaag gattggggag taaaagttac
      301 caatgtgagc gcattgtcag caaccctggc gcgcgagttt gataacgctt tgctttttcg
      361 caggcttgcc acactgcgaa ctgatctgcc cttgtttgag gatgtggaag agatgcgctt
      421 ccagcagtga ttgacacacc tcttccctca aacttctact catttataag aatttgcgct
      481 gacgtttaga aatcgtggaa gtcgaagccc tgaggctgac cttcttcgtc gtaggtcact
      541 tcgagcggtt tgccgtcgcg ctcagccggc ggattttcct gttcctgctt gcgctgggcc
      601 cgcttttgca gtttctcctg catcttctcc tggcgggcgc gttctctctg tcgcttagct
      661 tgtgtggggc gtgaattctg ggccatcttg tcctcccggt tttttggcgg gccagacgag
      721 cagccctgtt atcagttcat ggttgtattt acttcagctc atcacccgcc ggaagctgga
      781 ataagccctg gtgcttgcgc tcctggatgt ggtcccagac gagctgctgc tccagccatg
      841 cagcctgccg ctgcgccaag tcaacgtcct gcgcatgatc agcgtggctg atggtgaaac
      901 gctcgtcaca ttgcgcgcag atcacggtcc gcaatgcgac cgtgcgatct ttggcttgtt
      961 gattgcgacg gaagcgccgc gcagttcccc agggcccctg gtgcattacc acctcggctc
     1021 acgaggctgt cgcgcatgcc cgcgatagtc gtcacggctg ccgccgcgtc caccaccacc
     1081 ggttttcggc cgagcttcat tcacgttgag ctggcgtccg cccacctgct tgccgttcag
     1141 gccttcaatg gccttgtccg cttcaccgtc attcgacatt tccacgaaac cgaagccgcg
     1201 cgagcgtccg gtgaacttat cggtgaccac ggccacgctg tccacctggc caaagggctc
     1261 aaaccacgac cgcagctcgt cttcgttggt gctgaaactg aaatttccta caaaaatctt
     1321 cttcatacgt tcctcttgca cgcaaggtga gtaaaagcag gttccaggca gaaataggca
     1381 gaagcagatg cggcgacgtg tctatctgag cggaagaact cttggtgctg cattcatgat
     1441 atcagagagg tgccgctgga gacatcctga attcccgaag cgttgaaact ggatgacttg
     1501 aagcgcttta aacgggctgg gcctgctgcc gtgccgcctg gttggccagg cgattcgctt
     1561 cctggttgtg atggcgcgga atgtgcgaga tggcgaactt cagcgaccgc gccagcttac
     1621 ggcaggtcca gttcagggaa tagagccgcg ggctccggca gtggtattcg cccgtcatct
     1681 gcttcaccac caattgggaa tccgtgaaga cctggagcgc cgtggctttc atttccagcg
     1741 cctgttgcag cgcttccaga agagcggcgt attcggcaac attgttgtcc tgatggccaa
     1801 tccacttcgc tatgcgaacc agaccaccat ccggcttttc gatcaccacg ccaatgcccg
     1861 acggccccgg gctaccgtgg gatccgccat caacataagc cgtgaaaacc gacaatcgcg
     1921 ctccttactt gaccgctaac gagctactac taagacaaac aatgaagcaa cacgggttgg
     1981 ccgtcaagag attcgtttga ttcacccgga cagacacttc cgattacaca gttgcaaccc
     2041 gatttctgtg gaaagagctg tgaaaatcgg ggacgcagga ttccgcgcgc gaaagatacc
     2101 cgcatttttc gcggtttttt aacgcgccgt acatgtcgaa aaaaatctcc cgtttgcaca
     2161 aaccatggtt attgacatct ttcttcttta ctgtaggatt ccgagcgttg gcagacgaaa
     2221 ggctggttga aataaacagc ttccagccga tgtaatctga gtgatcgtgg cgatgaagcg
     2281 attcatcaca cgctccggcc cgaaaaaacc ggcaggccct gcgaggggca ggctgggacc
     2341 ggagaatcgc gaaagcgata gtcacatcgc aggttcaggc ggtacgtggt tcacgttttc
     2401 ggctccctcg caggagcagt tgactggatc ataaccaatg tctggtttgt gccaacggct
     2461 gaaaggaagg cttcaattaa ccgttgccat ccgaagtagg ctgggtgctc cgttgcacga
     2521 agcgattcgc ggcaacactc tgacccgaaa aaaccggcat gctttgcgag aagaaggctg
     2581 gggcagagac tgcgaaagca gtgaacacat caggagccgt gacggtacat gcgtccacgc
     2641 tgttaactcc ctcgcaggag ctgacgactg gagcataacc aatgtcacgg ctttttatat
     2701 ttttgtcgct tcgctccaaa ccgctcctgg ttcatcactc cacccaagtt cgtttatgct
     2761 cctgcggcac gccgctcgcc gcacaagttg ggctcgcggc tccttctcac gattcgatcg
     2821 gacgcacagc ccgaaaacct tctgcggttt caaggaactc attgaatccg aattgtgaaa
     2881 gctcatgctt caaccttggc gtgattctgg ttccaagcac ttcgaggacg gtatatggcg
     2941 gatccgcaga atcgctgccg tgatggaggt ctatcgtctc gagttcgttg atcaggatgt
     3001 cgtccgaaga gctactctcc acgaatttga aggccgtaac gccttccaaa tggctggcgt
     3061 ccggattggc agcccaaatc tgctgtgcga ctctccggtt ctcaggggtg tccacgatcc
     3121 aaacagggcc tttttgcgaa agctcaacga gagcgtggcc ataatcgcga tgcagcacaa
     3181 cgaaaactcg gtaaggctca gccataaatc cagatttcac ccgatcaccc gattcatcca
     3241 ctccaggagt tccttcgtaa cttcctcacg atttgtttcg ttcaggagtt cgtgccgcgc
     3301 ttcgggatag aacttgtgct ccacgcgcgt cagtcctgac tttcgatatt gctccagcat
     3361 cggcgtaagc atttttgttc cggcgctgac tgggtcgcgt tcgcctgaga tcacgtagat
     3421 cggcaggtca cgcggtgcac cagaaacccg atcgtcgcca gcgatggcgg cccaggcgtc
     3481 gagcatgtca atccaaagct gaacagacgg attgaagccg cagagcgggt cggccacgta
     3541 tttgtttact tctgccggat cgcgggagag ccagtcaaag cgtgtgcggg ccggctcaaa
     3601 ccgtttgttg aacgtatcaa aggtaagcga ctggatcagc ttactcttgc cacgcgcgcc
     3661 gaggcgcagc ttttccgccc ttgtaatagc tcggccagcg agcgccatgg gcgtcggctg
     3721 accattcgag cccgagagca ccacggcagc aaaagactgt ccgtggttac gcattagctg
     3781 acgggccaga agagcgccca tggaatgccc gagcagaata attggtaatc gcggattctc
     3841 ttccgcgatg cggcggttca cgcgccaaag atcctcagcg cacaaacgcc agccgttttt
     3901 cacgccgaag aagccgaggt cttccgggtt cttggcagtg cgcccgtggc cgcgaaggtc
     3961 gctggcataa acggcgtagc catcttcgtt cagcttttct gccagacgcg catagcgggc
     4021 tgcgtgttcc gccatcccgt gcgcgatctg gaccacccct attggagtag cctcggtctg
     4081 ccagcggtag acaaaaatct caacgccatc cgcgccggtg attagaaatg tgctttcttt
     4141 catcacaagc tggcaattct agccgatgct cgcagcatgt taccccttgc tcatttgatc
     4201 tttcagccgt gaaatggcca accgctgctg cgaaatgcat ctgttcgttt ccgaacaggc
     4261 ggcttcgcta acggacatcg ccggtcccaa gtcaaacgat gtgtggcgcg gctacgagtc
     4321 gtgctttcag ccacttagca gatgctggct catcggccag ccacgtgctt ttatagggaa
     4381 cgaaggcttg agttaaagcg taaagaagag caggcacttc aagtgagttc gatatgatct
     4441 ccgcacgtga tcccatggcc caggcagtaa ccctcatcca cggattcact tcgcgcccac
     4501 gcgttcttgt ggcggaagac caggaagacg tgattgcggc gttgcgtctg ctgctgaaga
     4561 acaacggtta cgacgtggat ttcgtaaagt cgccggcaga agcgctacag gcactcgctc
     4621 ttggcggatt cgatgcggtg ctgctcgacc tgaattacac ccgcgataca acgtcaggga
     4681 cagaaggtct tgagctcctc tcgcgagtgc aggccctgga cgacacactg gccgtggttg
     4741 cgatgaccgc atggggatcg gttgagctag cggtaaaagc aatgcatcgt ggggcgtgcg
     4801 attttgtcca gaagccctgg gacaacgcgc atctgctcga agtactggaa gaacaactca
     4861 cgcgttcccg cacgttgcgt cagaagcgtt tccgggaaca gcttgagcag caggaagcag
     4921 cgcaaatcca gcgcgcgctg atgccgggtg aaatcgcagc ttaccacggc ttgacgattg
     4981 cggcctcatc gcaatccgcg cgcacggtgg gcggcgacta ctacgacgtt ctccggctgg
     5041 acgagcatcg ctcggccgtc tgcatcgccg atgttgttgg gaaaggaatg gctgcggctc
     5101 tgctgatgtc gaatttgcag gctgcggttc gtatgatctc tgctgaagcg gcagagcctg
     5161 cttccgtctg cgagcggctg aaccgcgtgg tctttgcgaa caatgttccc ggaaaattca
     5221 tcactttctt ctactgcgtc attgatcccg tgagccgtgt tctcacctac accaacgcag
     5281 gccacaactg gccggttctg gcacatgccg atggaagctg cacccgactg agaactgacg
     5341 acctggtgct cggcgcgacg cgcgagtgga tgtaccacca ggggcaggag caactccgtc
     5401 ccggagaccg gctggtactg ttcactgacg gcattactga atccgccaac gaggaagggt
     5461 gcgagtttgg agaagatcaa ctttgccgcc tggtttcagt caacgtgcac cgcagcgctt
     5521 ccgatctcaa agcaaggttg acggaagagc ttcgcgccca ttccacaagt gagctggcgg
     5581 atgatgccac cctgattgtg gcagctctgg actaagcttc ttcaggcgag agcagcacag
     5641 caacgtacat ccccacttgc agctcacacc gaattcgttt ggtgtacagc ctgcgccaaa
     5701 gtacgccgca tccaacccgc aagtccccca ggagccgggt tgcgcctctc ggctgcgaag
     5761 cattggagcg tccatgaagc gaagaagtcc tgtcaccaac ctgccgctcg aaaaccgtcc
     5821 gctgaccatt gatgaagtga gaatcgttgc cgatctccgc gtgatgcact caaaagtaga
     5881 cgagctctac caggtagtga ataacctcaa gcgacgccat catgaagacg ccatcaaagc
     5941 ctacgctgac cgcgaggtac tggacgagga cattcgccgg gcggatgaga tctatctttg
     6001 gtttgtagca ctcaaagagc cggcgcgagg actgaaactc ggctgagctc aatcggcggc
     6061 ggattgctca agccatcctg gcgtggcagc ctccgcgagc atgccaatca cgagaaaccg
     6121 tccgaaaaat tccttacgat aaaaagcccg tgcttcccgg cacgggcttt ttctccgatt
     6181 cagcggaacc tacgccgctt tcctggattt gccacgcgac gaactcgaac ccttgcgatt
     6241 gcgcgagttc tggcggtctt cctgcccttt ctcttctatt tcttcttctt ccatgccgct
     6301 gcgctcgggt ttgattttct ttgcgaagcc ttccatcttc ttcagcgttt gctgctcttc
     6361 acgcaggttc tgctgcaaca gccgtactgc tttcttgtgg tccatgtcag tggccaactg
     6421 aatcaactct tcataggccc ggatttcgta gctttcgacc ttggccgcag cgccgaccag
     6481 aaagacgtca agaatatccg gagagggctg ctcctgcttg aagttgtcaa cttcttcgat
     6541 cagcccctgc atgccgcggc aatcagtatc ctgagcttct tcttccagtt gctcaaagac
     6601 ctgctccagc cgctccacct gtccctgcgt ctgcttcagg tggttctcaa aggccttctt
     6661 gagctgctcg tttccggccg attcggcctg ctgactgagc gcttcgacca gctggcgctc
     6721 ggcatccaga acgtcagaaa gtccatgcaa aaacaattcg tgtgcggttt ccaccatatt
     6781 tcctcctccg ggttcctcgg gtaagatgcg atactgtaac gaaggctgcc ttcccccaaa
     6841 tttgggcccg catgcacggt ttttacgatt gctttctaaa atccgttgag aagttccctg
     6901 accacgtggc ggcagagctg cagcacgtga gcgggccggt agagagctac acctacgccg
     6961 agctgcgccg catgggcgaa tccattggcc gctggctgcg cgaatccggc atgtcagaag
     7021 gcgtgcgctg cgcgatcatg gccagcaatg ggccgctgtg ggtggcgtct tacctgggcg
     7081 cgatgtcagc cggagcagta gccgtgccgt tggacacggc attcaacttt caccaggtaa
     7141 ataagctgct gtgggactgc ggcgcctcca tcatctttac tgacgcaaag cacctcccgg
     7201 tggtggagaa ggccgtggac gagacgctgg tgcggatcgt gatgatcgat ggctccggcg
     7261 aaggcaaata ttcaaacctg ctggggatgt ttgccgccgg gcccgggagt ttcacgcccg
     7321 gtgtggtgaa gagtgacgac cttgcggtga tcatgtacac ctccggcacc acctctgatc
     7381 ccaaaggcgt gatgctcacc cacggcaacc tgctggcaga agcggacgcg gtatttgggt
     7441 tcatccacat ctcagaaaag gacgcgattc ttggcgtgct gccgctgttc catgcgctgg
     7501 cgcagatggc caacctgctg cttcccttcg cggccggcgc gcgcatcgtc tatctggaag
     7561 agatgaacac cacggagctg ctgcgcgcgc tttcagagcg caacgtgact ctcttctgct
     7621 gcgtgccgca gttcttttat ctgatccatg aacgggtgat gcaggaagtg aaaaagcgat
     7681 cgtgggcggc gcgcgcggcg tttcgctcca tgatgggcct ttcaggagcc gcgcgtaagt
     7741 tgcacatcaa tttaggaaag ctgttcttcg gccgcgtgca tcggctgctg ggaccgaaga
     7801 tgcgctacct gatcaccggc ggctctgcgt ttgatccgag tatcgggcgg gatttgcaga
     7861 agctcggctt taatgccctg caggcgtacg ggctcactga aaccagtggc ggcgcattct
     7921 gcacgaaacc cgatctgaat gtaatgggct ccgtgggcaa tcctctgccg ggcgtacagg
     7981 taaagctggt ggacccgcag caggcagacg gcattccata ccctgtaggg gaggtcgcaa
     8041 ttgcgggcgc tattgtgatg aagggttact acaaccggcc ggacgccacg gcggaagcca
     8101 tcaaagaggg ttggctgcat agcggcgatc tcggctacct cgacccacgg ggcatcctgt
     8161 tcatcacagg gcgcaagaaa gagatcattg ttctcagttc gggcaagaac atatatcccg
     8221 aggaaattga agcgcattat ttgaagtcgc cgttcatcaa ggaaatctgc gtgatggggc
     8281 tggtcaaccg tcccggcgag ccgttttcgg agcgcttgca tgcggtgatc gtgccgaatt
     8341 tcgacgtgct gcgggagaag aagatcgtaa atgccggtga ggtgatccgg tttgatgtag
     8401 agaacctttc cgtggagctg ccaagcacca agcgtatcct gagtttcgat ctctggccag
     8461 atcctcttcc ccgcacgacc acacgcaagc tgaaacgctt tgagatccag cggcgagtga
     8521 tggctggaga gcgtaccgct tcgtcgaccg gggcgcccgt cgcggaagaa cccagcgcgg
     8581 aagaagcaat ctggctggcg cagccggatg tgcagcgggc ggtggccgtc attcgcgagg
     8641 cgagcaaggc gcagaagccg attcaccctt cttccaatct ggagctcgat ctcggctttg
     8701 attccatgga gcgcgtggag ctggtggtgg cgctggagcg cgaactagga gctgaggctg
     8761 acgacaaagt aatctcacag gtttataccg tacgcgaact ggtggatgcg attctccagg
     8821 cacacagcgg agccgctgtg gggtcccgtc cgtcactccc gggttgggat gcggtactcg
     8881 ccgcagagcc cgacgaccgg cgcgtgcttg cgcccctgca cagcagcatc gtcttcgcgt
     8941 ttctctggtt tgtgctggtg aagatagtcg gggtgattac gcgtatcttt ttccggctca
     9001 gtgtgagcgg gaaagaaaag ctgcccagaa atggtccttt cattctctca cccaatcacc
     9061 agagttttct tgacggcccg gtggtggtga gccagattcc gtggcgcctc tacaaaaaca
     9121 tgttttatgt gggaaccagc gagattttcg gcgaaggatt tttccgctgg attgccagca
     9181 ctttgaagct ggtgccggtg gaccccgatt caaacctggt caacgccatg cgcgccggcg
     9241 cttacggcct gaagcaggga cgaaaccttg tgctctatcc ggagggcgag cgctccattg
     9301 acggcacgcc gaaaaagttc aagaagggcg cggcgatcct ttccgcacac ctgaaagttc
     9361 ccattgtgcc ggttgcgctg gaagggtttt atgatgcctg gccgcgcagc cggaagctcc
     9421 cgcgattggc caaactccgt gtgcgcttcg gcgatcccat acttcctccc gcttcactgc
     9481 agaaccctga agaggtctac cgccaggtca cggagaaact gcgtaacacg gtggtggaga
     9541 tgtgggagtc aatgcgcgat aagcagccgc agcccggggc ggcggctgca gcggattgaa
     9601 cggcagccaa ttactttggt acttcgattt tttattgcct aaacgtccta tcctgagtac
     9661 attgagccag tcgcttcact caggaggaag gaagaaggat gccaaggttc gtctcgctcg
     9721 ctgttctgag tgttctctta ggcacgatct ccctttcagg tcaggatccc tccgtacaaa
     9781 aggccatcaa agagggaaag gcttgtgttg tcatcgtgaa cagctcgccc accggcgctt
     9841 cgattctgat tgatggaagt cccgctattc agcccgccgc tcagatgaat ggtctgactc
     9901 cggccatgtt tactcttttt aaaaaggact tgcctagagt catcaccatt caaaaggatg
     9961 gctacaaacc gttgacccgc agtgttgatc ccacaggagc gccggtcgcc ttagaagtct
    10021 cgcttgaacc gctgcaggcg gcttccagtt cagcctcgac ttccgcctta gtccctgtag
    10081 gagtaacacg gtctgggtct tccgctgcag ttccttcccc atttggtttc cgctatggtg
    10141 cctccaaatc ggaggtcctg aaggatctgg gtccgaaagc tgttgtgaaa acccgggcta
    10201 gttctgtcac cttgaacaca gctcccacgc cacatcctga ttttgagttt tacactctat
    10261 tcttctctcc gcaaaaagga ctgctgaagg tctccgccgc ctcgcatgac gtggagagtg
    10321 cggatgacgg ttcagaattg cgagcgacgt tttcgcgact gaaatctgcc cttgaagcaa
    10381 aatacggcgc tgcaaagatt ctcgacaatt gcaaagggag cgaggtggct tgcgaaccgc
    10441 agttcttcat gatgcagttg atggaaaaaa atcggacctt gttcgctctt tgggaatcgc
    10501 ctgcgattgt gctggaagta aaggccctcg gcatcaggaa gggatacgta acacttgatt
    10561 atgaattccc cggctgggat gagttcgtgg ataacgtcga gcaaaagaaa gactcggttt
    10621 tctaatcagc tttcgctcaa tctgttcata tccgcgaact taattggcgg ggctcctttt
    10681 agggctcatg gccgtctact ggagttcggt tcagttctcc ccgcaggaga ttgcagccca
    10741 atgaggtgag tggaccagaa gggcaaacag acgcagctgc gaatgccatg ggtgacgcag
    10801 ccaagccaac ctgaaacgat ttgccccgtc taaaacccca tttcggacgg attaagaact
    10861 gttaaattct catgatccgg tgcaaatcac agatttcaga agcgttcagg tttaacgcct
    10921 gtttaacagg aatcgttgaa acttattctc aggtcgacac gtattaacga tagaagcaac
    10981 aagatggccg gcttaaccaa tacggaactc ggcaaaaaaa tcagcgagag tttgtcgctt
    11041 ttgccatttt caaacgtcta tctttgtagc aacggaaagg gtgaagtcat gttgagcttg
    11101 aatatccatc atctgggaga ggttgcggtc ttcgaatgtt ccgggcggat caccgccgag
    11161 gacagcagcg ggctgcgtag cgcggtattg gcgcagacgg acggccatat ggtggttctg
    11221 gacctcaaag aagtgagcca gattgatgcc gccggtcttg gagtgctggt agggctgcgc
    11281 aactgggcgc agaacagcgg caaggaactg aagctgatga acgtgatgcc gcgcgtggag
    11341 cgggtaatgg agatcacgag gttgcgctcg gtttttagca tctgctcggc ccgcgaaatg
    11401 ctcgatctgt ggtgccgggc catccattcc ggggtgtgct cggcttccgc accctataag
    11461 ctcgccgcca gcttctaagc ctgtcccgcc ttagcgcagg ggccggcttt aggctgttgc
    11521 gctgcgcgtc ttcggctcgt ccccactcga tataatcctc cgcatgaaaa tcaagtcgct
    11581 tgcgattctt gcattcgtca tggcgtcgtg tgcattcgtg tacgcacaaa ccgagtttcc
    11641 taaaccggaa ggacttgcgc cgggaacggg atactcgcat gtggtcgtca caagtccggg
    11701 caggctcgtg tttatcgccg ggcaggtggc ccgcgacgcc aaaggcaatc ttgtgggcaa
    11761 agatgatttg aaggcgcaaa ctgagcaggt ctttgcgaac ctgaagacgg cgctggctgc
    11821 cgcaggcgcg acgcttgacg atgtcgtcaa acttaattgg tacgtgaagg gatacaagac
    11881 tgagtacctg ccgccgattc gtgaagtgcg agaccgatat gtgagcaaaa tccatccgcc
    11941 ggcaagcacg ctggcaggcg tggcagcgct ggcaaatgac gagtacctga tcgaggtgga
    12001 ggccgtggcg gcgcttccgg gaaaaaaggc gcgcgggaag aaatgagttc gtgatccgac
    12061 ccgacactca ggttttcggt atcccgctcc aaacgatctc atgaaaaatg ccgtcgatct
    12121 cggccggtga gccggtgatc tcgtggcgaa cccagcgatc cataagttca aacattgcgc
    12181 ccgtgaatgc ggaggccagg atagcgacgc gctcacgctc gagttttggc tcaagctgat
    12241 gcaatctgcg ttcgatggag cggcgaaagt ggccgcgacc gagttccatg acatcaccga
    12301 ctttaccgga agcgaccagc gcctgataga aagtctgcgc cgtaccaaca tgcgacagta
    12361 gttcggcaag gggagccatg cgacgcgact tctctccctt tctttccagc catgaggcca
    12421 ttccctccca gaactcgtcg acgtcactca ggaagagatc atctttgtcg cgataatgac
    12481 tgtagaaggt ggaacggcct acatcggctc gatccagcac ctcttccact ttgatcgact
    12541 cgaaggtctt ttcctgcatg aggccaacca gggcgtctcc cagtacctcg cgcgtgcgct
    12601 tgacccggcg gtccggtttc ttcttcttag ctgtcttttt tccggacatt cccggccttc
    12661 ctgttcagga acgcgctttc acgcggcttc ctgcattgac cacaacaagt ttcgaacata
    12721 aatttcgcat catgaatgac aaccgtctca gcgcaatcgc acttattgcc ggctccgcgg
    12781 ggctgattat aaccatggca tttcatccca cagggcatga cttctttgtt cccggacaac
    12841 tcgagcatgc gatcaggatc aacatggccg tccacagcct ggcgctggca tccatgccga
    12901 tctcgtttct tggagccctc gggctttcat tattcctcaa ctcctcgaac cggctcgcga
    12961 tgtgcgcgct ggtttgttac ggagtcgcag aaattgccgg gatgaatgcg gggatctgca
    13021 gcggctttgt ggcgtcgcgc atggcccagc taagcgcggc ggccacgggc gctaccagcg
    13081 acgcctggaa gctggccctc cgctacaccg gcgaactgaa ccaggccttt gcgccggtgc
    13141 tggtggtggc tacgtcggtc gcgctcattc tgtggtcatg tgcgattctg cgatcggcga
    13201 aagggatgcg cgcacttgcg atttacgggc tggtgatcgg cagcctcacg atcatcggcg
    13261 tcagctccgg ccacgttcgg ctcaacgttc atggttttgg tgtggtggtt ctgacgcagt
    13321 cgatctggtt tgtgctgatg ggagtgcggt tgtggaatgc ggacgccgca aagggagcgc
    13381 gcgaaggggc ataagaaaat tgacccggcc aggcggagag tcctggttca aaagctatct
    13441 atcgcgggta agcggatgat cgaggctccg caactaagct gcggcatgct gcggctctac
    13501 gtcgtgattt tcacctggcc ttcggttcaa aactgtgaca tcgcaggagc atagtagacg
    13561 caccgcggta caatatgaac gagcgctttt tatgcctgaa tggctttatc caatcctcat
    13621 cgttgccggt tacatcctgg taatgcgagt tgccctgcct cggttaggtg tgcagacttg
    13681 aatgtctggc gcctgcgagc tccgtggaac ggagccaaaa gacatcgcaa ataagccagg
    13741 gacaacttca caggtttgaa gactgtaact ctctaccgtc cagtcggcca gaaagaactc
    13801 gagttgattg cagcgagcgg atggaaggag tttccgccgc gccttcctga ccagccaatt
    13861 ttctatccgg tgctcaaccg cgagtacgcg gagcagatag cccgcgactg gaacacccat
    13921 gacgagcgct ccggcttcat aggccatgtg cttgggtttg atattgatgc agaatatctg
    13981 aatcgttttc agttgcagaa ggtgggtggg agagaacacc tggaatattg gattccagtc
    14041 gagcaactgg cggagttcaa ttgccacatg gtgggattga tccggaagat tgcaacgttc
    14101 ataaggaaaa gctgacgatg ttcaccgcca gcggtcaact ccgtcccacc aaagagtttt
    14161 cagccattcc aggaacgtca tcttggccca ctcgcgatgc tgccaccagt gcgtcccgaa
    14221 gacatcagga tcaagggccg cagccaccga ccagtgatgc tgcggcaact ttttgcgaaa
    14281 gatggagagt gcgcgccggc tgtggt
//
LOCUS       DASQYP010000337         7455 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_161331, whole genome shotgun sequence.
ACCESSION   DASQYP010000337 DASQYP010000000
VERSION     DASQYP010000337.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 7455)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7455)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7455
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_161331"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(103..369)
                     /locus_tag="VE783_10950"
     CDS             complement(103..369)
                     /locus_tag="VE783_10950"
                     /inference="COORDINATES: protein motif:HMM:NF033788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metalloregulator ArsR/SmtB family transcription
                     factor"
                     /protein_id="HYX53958.1"
                     /translation="MDAKQFQKIAKALADPRRFEILSRIAGVKEMACANLRCDLPITA
                     ATLSHHIKELENAGLVEVRKDAKYIHIKLRRPVWREYLAELKKI"
     gene            complement(416..595)
                     /locus_tag="VE783_10955"
     CDS             complement(416..595)
                     /locus_tag="VE783_10955"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53959.1"
                     /translation="MQYLNPGPMVFGPPRRLRPSKSVVVIGGPAAPIPRKDRCASGRH
                     NKRLTECYCQQMKQR"
     gene            complement(1002..1451)
                     /locus_tag="VE783_10960"
     CDS             complement(1002..1451)
                     /locus_tag="VE783_10960"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53960.1"
                     /translation="MKSATLLPAFLTLVAGISLGQSTDKKSNTPQPATQAQQTRSFEF
                     KTDISKMKVQVAKQGDPALSQNTPLLMEKPDRSFDRGIYAQSSGTGSRMCGAIVSYNF
                     SPGENPQLQSVTTCTPSDAVVPQRARQQKPLKSPTPQLLQADFRWRD"
     gene            1510..2271
                     /locus_tag="VE783_10965"
     CDS             1510..2271
                     /locus_tag="VE783_10965"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012792.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HYX53961.1"
                     /translation="MFQAEKAFAESALQSNSQAAGYNAPPMHPLDNPTWSALTSHQAG
                     FAIVDGMARRFPPEVCVHGAIASPILPAWQSLARIARDPVAIFSLHPPQLPPEWTTTR
                     QVELREMLQDHPSEIKLGQGTELVELTADDLPQMSALYEATRPGRKLSPRLYRLGGFL
                     GVKQDGRVVAMGCLRLHLRGFREISTVGTLPEHEGRGYASAIVAELARRIRIAGEIPF
                     LTVRSDNQRAAQIYQSLGFVERTLMYSTTLQSHST"
     gene            2400..2909
                     /locus_tag="VE783_10970"
     CDS             2400..2909
                     /locus_tag="VE783_10970"
                     /inference="COORDINATES: protein motif:HMM:NF017690.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HYX53962.1"
                     /translation="MRAVKTCLFAVLVCAAALAAAQDEGHVANMTKLKLGNVDGVPKC
                     MTLAPVHGDPFKGAAVIAIKMTSGCTVPWHWHTATENLIFVSGKGKAEMKGSPAAMLG
                     PGDYVYLPGKMQHEFTCVVSCTFYDSIDGAFDIHYVDKDGKEIPADQALKSGATKPAM
                     KKSTESKKK"
     gene            complement(3259..3513)
                     /locus_tag="VE783_10975"
     CDS             complement(3259..3513)
                     /locus_tag="VE783_10975"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53963.1"
                     /translation="MPCISEFIRVANLHSFAAILKLEVTSPDVPFDLYGTVTGLRAGV
                     SERGVVIAGIVAVVGINRKLALLPGGKFDDLFAEQIDPLR"
     gene            3613..3990
                     /locus_tag="VE783_10980"
     CDS             3613..3990
                     /locus_tag="VE783_10980"
                     /inference="COORDINATES: protein motif:HMM:NF013222.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MGMT family protein"
                     /protein_id="HYX53964.1"
                     /translation="MLQAIRKVILQVPRGKVSTYGAVARAAGFPGAARQVVWALRGGH
                     GLPWHRVLAAGGRIALPGEHGFEQRMRLEAEGVLFSGSRVRMSECEHKFGPARSKRAK
                     SRAISPKAKSATRKNLVRKKRRR"
     gene            complement(4057..5079)
                     /locus_tag="VE783_10985"
     CDS             complement(4057..5079)
                     /locus_tag="VE783_10985"
                     /inference="COORDINATES: protein motif:HMM:NF013775.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphotransferase"
                     /protein_id="HYX53965.1"
                     /translation="MPETALDQVLLELRESAGSHYPELGELKNLRVVGHTPKNDHFIY
                     DACADFEQGSERIAIKMYRANKCNGNAKGVAKQENANLQFVQEATKRKKINGVPRPLG
                     DFSELGAVVTDKISGLPLQSIVMKAALLPGFADNGSIALVARRAGEWLRAFHKATSEM
                     PEPFDGTALLSALEKLCQNCMTEGLDQDSVDVILNGARNVLGRSRKTLPSAAVLGDFT
                     PLNLVVTDQGVGFCDFARMRRRGVAFEDLAQFLASVEALEKYPFCNRAITSQIQENFL
                     DAYGVSQSEAAVLRVLKMKALLGMFAQGRTVKESAVRKKVMWANVMRKFIHAAAQRSL
                     APTAAA"
     gene            complement(5385..5960)
                     /locus_tag="VE783_10990"
     CDS             complement(5385..5960)
                     /locus_tag="VE783_10990"
                     /inference="COORDINATES: protein motif:HMM:NF025637.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0004519 - endonuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HNH endonuclease"
                     /protein_id="HYX53966.1"
                     /translation="MRNKRHHQDAPVEPPPPRKNLMMQTPVLVLNASYEPINICAARR
                     AIVLVLKGLAMPEEENGQFLHAARVAMRVPSVIRLLEYRRIPHQTRALSRKNILLRDR
                     NTCQYCGQVISSSDLTLDHVVPRSRGGLSTWENLVACCHPCNRRKGNHLLGETDMKLL
                     KEPRPFTLHTSRHIMRMIGRSDLKWRKYLFY"
     gene            complement(5971..6969)
                     /locus_tag="VE783_10995"
     CDS             complement(5971..6969)
                     /locus_tag="VE783_10995"
                     /inference="COORDINATES: protein motif:HMM:NF039185.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ComF family protein"
                     /protein_id="HYX53967.1"
                     /translation="MVDSPIARGSRHPLTIYSLQAVGNTAILRPFALPKELQEGRRVV
                     FSSSGDLTRERRVPQSVTLLRAGETTLQAVAESLFSVLFPSLCRICRAPLTNISRLPV
                     CHSCLAQIAPLEEPLCSFCGEKLFTQQAEAELLPVCGICRKAEPRFRRAVAYGAYASA
                     LRDLLHVFKYQQVRSAGPELARMLGEAVDKLAIDSKLLVIPVPLWPGKRRTRGFNQSE
                     ELARAFVRTRRAATSIQLDTTSLVRTRETASQTGLTRLQRRANLRGAFEVIRPEKVRD
                     RSILLIDDVLTTGSTAGECARVLQRAGAQEVFVATVARATREIESVFGREGLKGHA"
     gene            7062..>7455
                     /locus_tag="VE783_11000"
     CDS             7062..>7455
                     /locus_tag="VE783_11000"
                     /inference="COORDINATES: protein motif:HMM:NF015148.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0035673 - oligopeptide transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="OPT/YSL family transporter"
                     /protein_id="HYX53968.1"
                     /translation="MAGTTQAPEPAFQPYVPANEIRPEFTLRAVFFGGLFGILFGAVT
                     VYVGLRAGLTVSASIPIAVLSISVLRALGKASILENNIVQTTGSAGESVAGGVIFTLP
                     ALIFLGFPMEYARIFLLAFIGGWLGVLFM"
BASE COUNT         1576 a         2180 c         2129 g         1570 t
ORIGIN      
        1 tcttctcttt tccgcggctg ttacccgctt cgataattcg atgagcatct aattgattcc
       61 tcagttggag gaaggattca ggaaaacggt gtgcaaaagc tcttagattt tttttagctc
      121 ggccagatac tcccgccaga cagggcggcg cagcttgata tgaatgtact tagcgtcctt
      181 gcggacctca accagcccgg cattttccag ctccttgatg tggtgagaaa gggtggctgc
      241 ggttatgggc agatcgcaac ggaggttggc gcaggccatc tccttcacac cggcgatgcg
      301 gctgagaatc tcaaagcggc gcgggtcggc cagcgccttc gcaattttct ggaattgttt
      361 ggcgtccatg gaacagctgc gttctattat cccattcgaa acggctgaag gcgcctcagc
      421 gctgcttcat ctgctggcaa tagcactcgg tgagtcgctt attgtggcgc ccggaagcac
      481 agcggtcctt gcgcggaatc ggcgcggcag ggccaccgat tacgactaca gattttgagg
      541 gacgcagccg gcgcggtggg ccaaacacca tggggccggg attcaggtat tgcatagctg
      601 ctccaaagct cagttatgcg cccgttcccg tcgcaagtaa agccaattag aagaattaat
      661 cgaaaacttc agatctaagg acctgctgca caaatcccac gaagcgcgcg aagattttcc
      721 tctgtgtgcc tttgtgtcct ctctcgtaaa tgcaaccggg agccgaccaa ggtctgtcac
      781 tcgcgaaagc ccgagcgacg taggcgcgtc atgagcgtag cccccgggtg aaggcgcgca
      841 gcgccgaaac cgggggaaca gttaagagaa gcacctcttc cttacgcctg tggccggtag
      901 cgcagcgtag cgaagcgacc agtaagaaag cagtagtgaa gcggagcgct caaagccatt
      961 ttcgtgctcc tttgggcacg cccgttcttt gcgactttgt gttaatcccg ccaccgaaaa
     1021 tcggcctgca acagctgcgg cgttggcgat ttcaacggtt tctgctgccg cgcgcgttgc
     1081 ggaaccaccg catcactcgg cgtacaagtt gtcacgctct ggagttgagg gttctcgccc
     1141 ggcgaaaagt tataactcac aatggccccg cacatccggc tgcccgttcc gctgctttgg
     1201 gcgtaaatgc cacgatcgaa ggagcggtct ggcttctcca tcagcaatgg agtgttttgc
     1261 gacaaggcag gatcaccctg cttcgcgacc tgcactttca tcttgctgat atcggtcttg
     1321 aactcgaagc ttcgggtctg ctgcgcctgc gtggcgggtt gcggggtatt gctcttttta
     1381 tcggtgctct ggcccaggga gatgccggcg acaagggtta aaaaggcggg taacagagtg
     1441 gcagacttca tcaggcgcat aagtcctcca acaaggactt attttacgct tttgtgtcac
     1501 ggaaaaaggt tgtttcaggc cgaaaaagcc tttgccgaaa gtgcactcca gagcaacagc
     1561 caggcagcgg ggtacaatgc tcctcccatg catccgctcg acaatcccac atggtctgcc
     1621 ctgacctcac accaggcagg cttcgccatt gtcgacggta tggcgcggcg atttcctccg
     1681 gaagtgtgcg tgcacggagc tatcgcgagc ccgatcctgc ctgcatggca gtcactcgcg
     1741 cgcatcgcgc gcgatcctgt ggccatcttt tctctgcacc cgccgcaact tcccccggaa
     1801 tggacaacaa cccggcaggt ggagctgaga gaaatgctgc aggaccatcc ctcagaaatt
     1861 aaactcgggc aaggaaccga actggtggag ctgacggctg acgatctgcc gcaaatgtcc
     1921 gctctctatg aagccacgcg cccgggacgc aagctttcac ccaggctcta tcgtctgggc
     1981 gggtttctgg gcgtaaagca ggatggacgc gtggtggcca tgggctgcct tcgtcttcat
     2041 ctgcgtggct ttcgcgagat cagcacggtc ggtacgctgc cggagcatga agggcgaggc
     2101 tatgccagcg cgatcgttgc cgagctggca cgccggattc gcatcgccgg agaaatcccg
     2161 ttccttactg tccgcagcga caatcaacgc gcggctcaga tttaccagag cctcggtttc
     2221 gttgagcgaa cgctgatgta ttccactacg cttcaatcgc atagcacgta acgcttcgca
     2281 cctcaaccgc cactatgccg gtcgggccag atggcctaga atgcgtgaaa gctcgtatag
     2341 ggtcccgctt caatccacaa atccaacgat ctgatttcga ccaacaggag agaaacagga
     2401 tgagagcagt aaaaacttgt ttgtttgccg tgctggtgtg tgcggcagca ctggcagcgg
     2461 cgcaagatga aggacatgta gccaacatga ccaagctgaa gctgggcaac gtggacggcg
     2521 tcccaaagtg catgacgctg gctccggtgc atggtgaccc attcaagggt gcggctgtaa
     2581 tagccatcaa gatgacctcc ggctgcacgg tgccatggca ctggcacacc gccaccgaaa
     2641 acctgatttt tgtcagtggc aagggcaagg cggaaatgaa gggttccccg gccgccatgc
     2701 ttggccccgg tgattacgtg tatctgcccg gcaagatgca gcacgaattc acctgcgtgg
     2761 tctcctgcac tttctatgac agcattgacg gcgctttcga cattcactac gtcgataagg
     2821 atggcaaaga aattccggct gaccaggcgc tgaaatccgg cgctaccaag ccggcgatga
     2881 agaagagcac agaatccaag aagaagtaag taacgcaacg gatctgaaga gaggcgcggc
     2941 atcgagtcgc gcctctcccc tatctccacc tcttctctaa ctccacccct gcctgccgac
     3001 gtggacactc gcatggtggc ctgccgcatg aatgagctgc ccagcctgtc actttttctc
     3061 cccgacaacg atttatactc acggtcgatt ggagtgatca atgacccgaa ctcttacgat
     3121 cgcgttgctg ttgatggccg ccacccatgc ccaaaatgac gcccctttaa agaagctcgg
     3181 ggccttcttg gcaaatggga atcttctgcc aagtttgcga gcggcgaaaa agcttcatcg
     3241 cagatcgact gccgatggtc accgcaaggg gtctatctgc tctgcgaaca ggtcgtcaaa
     3301 cttcccaccc ggcagcaacg ccagcttacg gtttattcct acaacagcaa cgattccagc
     3361 tatcactacg ccacgttcgc tgaccccggc acgaagccca gtgacggtac catagagatc
     3421 aaagggaacg tctggacttg taacttcaag tttgaggatg gcggcaaaac tgtgcagatt
     3481 cgcaacacga atgaattcac tgatgcaagg cacgaggtct tcaacgttgt aacttctgat
     3541 gacgctggcg ccacctggaa gccgatgctt gaaggctcag ctcacaaggt cggggattag
     3601 aaccggacaa aaatgctcca ggctattcgc aaagtgattc tccaggtccc gcgcggcaaa
     3661 gtctccacgt atggtgcggt agcgcgcgcg gcagggtttc ccggcgctgc ccggcaggtt
     3721 gtgtgggctc tgcgtggagg acacggactg ccatggcatc gcgttctcgc cgcgggagga
     3781 agaatcgcat tacccggtga gcacggcttc gagcaacgga tgcgcctgga agcagaaggc
     3841 gttctgttca gtggctcgcg ggtacgaatg agcgaatgcg agcacaaatt tggaccagcc
     3901 cgcagcaagc gcgctaagtc gcgcgccatc tcacccaagg caaaatcggc aaccaggaag
     3961 aacttggtcc ggaagaagag acgccgctga agcactcagg ccgcccgcag gcggcctgaa
     4021 aatggatgaa cggccttgca ggatgctata gcgtagctaa gctgccgccg tgggcgcaag
     4081 tgacctttgc gctgcggcat ggatgaactt ccgcatcacg ttcgcccaca tcactttctt
     4141 gcgcaccgcg ctttccttta ccgtcctgcc ctgggcaaac atccccagca gcgctttcat
     4201 tttcagcacg cgcagcacag ccgcttccga ttggcttact ccataggcat ccaggaaatt
     4261 ctcctggatc tggctggtga tggcccgatt gcagaaggga tacttttcca gcgcctcaac
     4321 tgacgccagg aattgggcca ggtcctcgaa tgccactccg cgacggcgca tccgggcaaa
     4381 atcacagaag cccacgccct gatcggtgac taccaggttc aggggcgtaa agtcgccgag
     4441 cacggcagcg ctgggcaaag tcttgcggct gcggccaaga acgttcctgg cgccgttcag
     4501 gatcacatcc acggaatcct ggtccaggcc ttcagtcatg cagttctggc agagcttttc
     4561 cagagcactc aacaaggcgg ttccatcgaa cggctcaggc atttcagatg tggctttatg
     4621 gaaggcccgc agccattcgc cggcccggcg cgccaccaag gcgatgctcc cattatcggc
     4681 aaatcccggc agcagcgcgg ccttcatcac gatcgattgc aacggcaagc cgctgatctt
     4741 gtccgtgacc acggcgccaa gttcgctaaa gtcacccaaa gggcggggta cgccgttgat
     4801 cttcttgcgc ttggtggctt cctgcacgaa ttgcaagttg gcgttttcct gcttggccac
     4861 tcccttggcg tttccattgc acttgttggc ccggtacatt ttgatggcaa tgcgctcgct
     4921 cccctgctcg aaatcggcgc aggcgtcgta aataaaatga tcattcttgg gcgtatgtcc
     4981 caccacccgg aggtttttca gttctcccag ctccggatag tgactgcccg cgctctcacg
     5041 cagttccagt aatacttggt ccaatgcagt ttctggcatt cttgctcctg tgtgatttgc
     5101 tggcgcttaa ggaaacgctg aaagggcgca gcacgaacca tctgtgccgc cgttttgttg
     5161 gatgcagttt ctgctgcact gccgagagaa aatctgcaca ttgcactggt cagcgtacct
     5221 cggcgtgcat tatgccttgg cgcgtgtggg aatcgaggta catacattgg gaaagttact
     5281 ggaaacagta gcgcgcagca tacctgcagt ggttaagggg agaccttaac actccataca
     5341 aacaaaaggc gcgaccccag ccgcgccttc gctattcacg aagattaata gaagaggtac
     5401 ttgcgccact tcaggtcaga gcgcccaatc atccgcatga tatgccggct ggtgtgcagc
     5461 gtaaatggac gcggctcctt cagcagcttc atgtcggttt cgccgagcag gtggttgccc
     5521 ttcctccggt tacagggatg gcagcacgcc accaggttct cccacgtgga gagtccccca
     5581 cgcgaacggg gcaccacatg atcaagcgta agatcgctgg acgatataac ctggccgcag
     5641 tactggcagg tattgcggtc gcgcagcagg atgtttttgc gcgacagggc gcgggtctgg
     5701 tgcgggatcc ggcggtattc gagcaggcga atcacggaag gcacacgcat ggccacacgc
     5761 gcggcgtgga ggaattgtcc attctcctcc tccggcatgg ccagcccctt gagcaccagc
     5821 acaatggcgc gccgcgccgc gcagatgttg atgggctcat aggaggcgtt gagcaccagc
     5881 accggagtct gcatcatgag gttcttccgc ggcggcggtg gttctaccgg cgcgtcctgg
     5941 tgatggcgct tgtttctcat tcggtcccgg tcatgcatgg cctttaagtc cctccctgcc
     6001 gaaaacgctt tctatctctc gcgtggcccg ggcaaccgtg gccacaaaaa cctcttgggc
     6061 tcccgcgcgc tgcaggacac gcgcacactc gcccgccgtg gaaccggtgg tcagaacgtc
     6121 atcgatcagc agaatacttc gatcacggac cttctcggga cggatgacct caaatgcgcc
     6181 gcgcaggttg gcgcgacgtt gcaggcgggt cagtccggtc tgcgatgcgg tctcccgcgt
     6241 tctgaccagc gaagtggtgt ctaattggat gcttgtagct gcccgccggg tacgcacaaa
     6301 agcgcgggcc agctcttccg actggttgaa accgcgcgtc cgccgtttgc ccggccataa
     6361 tggcacaggg ataaccagca gcttgctgtc aatggcaagc ttgtccaccg cctcgcccag
     6421 catgcgcgcc agctccggcc cggccgacct gacctgctgg tacttgaaga cgtgcagcag
     6481 gtcgcgcaac gcactggcgt aagcgccata agcaaccgcg cgacggaacc tcggctcagc
     6541 cttgcggcag ataccgcaaa ccggcagcaa ctcggcttca gcttgctgcg tgaacagctt
     6601 ctcgccgcaa aaactgcaca gtggttcctc gagaggtgca atttgggcca ggcaagagtg
     6661 gcacaccggc agtcgggaaa tgtttgtaag gggcgcccgg caaatacggc acaaggaggg
     6721 gaacaggaca gagaagaggc tttcggcgac agcttgcagc gttgtttccc cagcccgcag
     6781 caatgttacg ctctggggta cccgtcgctc ccgggttagg tcaccgctac tgctgaagac
     6841 gaccctcctt ccctcttgta gctctttagg aagtgcgaat ggcctaagta tagccgtgtt
     6901 ccccaccgcc tgcaatgaat agatggttaa aggatggcgg gaaccgcgtg cgatcggcga
     6961 atccaccatg aatcccagag agcgcttcga tttgtaatgg acttcgcgtt atgctaactt
     7021 gcgtcgattc aacagcagga acaattcagg ggaggaaaac agtggccgga acaacacaag
     7081 ctccagagcc agcgtttcag ccgtacgtac cagccaacga gattcgaccg gagtttacac
     7141 tgcgcgccgt cttctttggc gggttgttcg ggatactctt cggcgcggta acagtgtacg
     7201 ttggtctgcg cgcaggattg acagtttcag catctattcc aatcgcggtc ctctccatca
     7261 gtgtcctgcg cgcgctgggc aaagccagta ttctcgaaaa caacatcgtg caaaccacgg
     7321 ggtcggctgg tgaatccgtg gccggcggtg tcattttcac cctccccgcc ctcatctttc
     7381 tcggttttcc catggagtac gcccgcattt tcctgcttgc atttatcggc ggatggctcg
     7441 gcgtgctgtt catga
//
LOCUS       DASQYP010000338         7325 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_54958, whole genome shotgun sequence.
ACCESSION   DASQYP010000338 DASQYP010000000
VERSION     DASQYP010000338.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 7325)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7325)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7325
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_54958"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..262
                     /locus_tag="VE783_11005"
     CDS             <1..262
                     /locus_tag="VE783_11005"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53969.1"
                     /translation="FDWNKYKEDRRVEGEKMQPKRGRIRPVAGLGKEAYFARHVLHVL
                     TEKGVLTVIVFKTAGDAAAGEETETKAEAAEKSLAEKALPRM"
     gene            complement(275..751)
                     /locus_tag="VE783_11010"
     CDS             complement(275..751)
                     /locus_tag="VE783_11010"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53970.1"
                     /translation="MRHVLVLFLLLNLTVAFSQTKKQHGTDPWAGTFKLDTTKSKFSG
                     QAPKEETVTVDAATKASVKYAIKGTDADGKSYSVTYDGKPGTPSPQMADGNTVATVTY
                     KMPSSHEFTSVIKGADGSSGTGTITLSKDGKTITVREQTKDAGGAAHEQTAIYVRQ"
     gene            complement(901..1881)
                     /locus_tag="VE783_11015"
     CDS             complement(901..1881)
                     /locus_tag="VE783_11015"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53971.1"
                     /translation="MSKTPVVTLNRRHQNHTAPHFEQRKRNSSTIFGFALAGVLAVIA
                     FATPVTAQETLKAAPVAVAAPELESGFHLLYELKPSEAREQFDAWQKAHPEDPLASAL
                     QAANYLLEECYKQGVLTSEFFLDDKHNNDKTPLKSDPEKRAGFFAAFGRAQQLALARL
                     KDAPNDANALFAMTMSLGMQADYAGLIDKKQVESLGMMKDAAKYAKQLLAIDANNADA
                     YLALGFSDYIVGSLPGHQKFFLGFKGIHGDEKQGIKELQIAATRGHYLRPFAKMLLAL
                     ASLKQKKPDVARTHFTELATEFPDNPLFASELAKLGGAPSATASLQKQTR"
     gene            complement(2226..2543)
                     /locus_tag="VE783_11020"
     CDS             complement(2226..2543)
                     /locus_tag="VE783_11020"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53972.1"
                     /translation="MTGAYSFLCKYSSTSALCLRLNQLAWQWRIGDSHWYGDYLVATP
                     YPGVRIRIVDFPACAENGWRYDTDIRIHQECTTPKEEIHRAYREVLEQIPAEDIKEID
                     WFD"
     gene            2868..3893
                     /gene="mraY"
                     /locus_tag="VE783_11025"
     CDS             2868..3893
                     /gene="mraY"
                     /locus_tag="VE783_11025"
                     /EC_number="2.7.8.13"
                     /inference="COORDINATES: protein motif:HMM:TIGR00445.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008963 -
                     phospho-N-acetylmuramoyl-pentapeptide-transferase activity
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phospho-N-acetylmuramoyl-pentapeptide-
                     transferase"
                     /protein_id="HYX53973.1"
                     /translation="MGLIIGPAIIRQLREFQIGQYIREEGPKAHQKKAGTPTMGGVLI
                     TIAIIVPTLLWADLSNPYIWLVVMSTTAFGAIGFADDYIKVVQKRNLGLTGRTKLLLQ
                     FLTAGGVAVALVFLTANRQYSTHLMVPFFKQFRPDLVIESLRHYPHIWWLAFIPFVLF
                     VMLVLVGSSNAVNLTDGLDGLAIGCTVIAAGALTVLTYVSGHAKFSEYLELQIMPQVA
                     ELTVFCGAMVGSSLGFLWYNAHPAEIFMGDVGSLALGGAIGTVAVIIKQELLLPFIGG
                     VFVIEALSVILQVGSYKLRKKRIFKMAPLHHHFELSGWSESKIIARFWILSLIFAFFA
                     LTTLKLR"
     gene            3898..5301
                     /gene="murD"
                     /locus_tag="VE783_11030"
     CDS             3898..5301
                     /gene="murD"
                     /locus_tag="VE783_11030"
                     /EC_number="6.3.2.9"
                     /inference="COORDINATES: protein motif:HMM:TIGR01087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008764 -
                     UDP-N-acetylmuramoylalanine-D-glutamate ligase activity
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-L-alanine--D-glutamate
                     ligase"
                     /protein_id="HYX53974.1"
                     /translation="MPDSWHNGKRMELKNKRVLVVGLGRSGAASAVFLQEHGAKVTVS
                     DTRSEAQLQHEIPALLDRGISIETGRHGERTFRDQDLIVVSPGVPSDQPQLHHARSLG
                     IPVIGEVELAFRFLKGKVLAITGSNGKTTTTTLVGEILAKSGRKTLVGGNIGTPVISL
                     AEKSSADTMLVLEISSFQLETIEQFCPWIAAILNITPDHLDRHHTFQAYVDAKARLFE
                     NQRSTDFAVLNADDPTCVDLKRRVKSALYWFSRSGAVENGAYVKGDQIVFRQNGREQN
                     VLSVSDIHLKGAHNLENVLAGVTIGMLAGCEPQQVRQAVSEFRAVEHRLELVATVSGV
                     TFYNDSKATNVDATTKALESFPGNIHIILGGKDKGSDYTVLAPLLHERVRGAYLIGAA
                     AEKIASQIKGAAPIVHSGTMERAVRQAFEAARQGDIVLLAPACASFDQFENYEQRGRI
                     FKELVHSLSPVATGDRA"
     gene            5301..6389
                     /gene="ftsW"
                     /locus_tag="VE783_11035"
     CDS             5301..6389
                     /gene="ftsW"
                     /locus_tag="VE783_11035"
                     /inference="COORDINATES: protein motif:HMM:TIGR02614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="putative lipid II flippase FtsW"
                     /protein_id="HYX53975.1"
                     /translation="MAKQVGIDKWLFGSTLLLVLIGVVMVFSASAVMAGERFGSAYYF
                     LLRQLGWALAGLAAMTLSARLDYRVWKKPAIVFTFLGVTTLLLVAVFFFDRSHNTHRW
                     FRLGFASFQPSELAKPALILFLAFFLADRMKAIDDWRHTLLPAIVPPVLFCVLIVKEP
                     DLGTAIVCLGATAGILYVAGLRLRYFGYALLPLVPALVYLLSVPYRRARIKVFLNPGS
                     DPQGAGFHVSQSLIAVGTGGLTGLGLMEGKQKLFFLPEPHTDFIYAVASEELGLIGAA
                     FIATLFLVFAWRGFRVAMRAKEPFARFLAAGITTTVVLQAFFNMSVVLALLPTKGIPL
                     PFISYGGSSLFVTLASVGVLLNISQHAD"
     gene            complement(6449..>7325)
                     /locus_tag="VE783_11040"
     CDS             complement(6449..>7325)
                     /locus_tag="VE783_11040"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HYX53976.1"
                     /translation="MRGRASGFITAGFGAGSMLFIPLIADILKTSGYKEAFLYTGIGQ
                     GLVILVAAQVLQNPGPDFKVSPAAKKPVSPKLRRNTAQFTSLQMMSTPQFWLMYVAFV
                     LTSVGGLMITAQAAPVARGMAIPAAAIVMALAWSRGANGAGRIFWGWLSDYVGREMAM
                     VIPFALQAGCIVAVLTLGRLSGAWFIATMIAIYFTWGSMFSLFPAIVGDYFGADHATS
                     NYGFLYTAKGVASIGGGWIAAKLFEKFGNWNADFYGTAALALVSAFMILALKAMPLPK
                     RAEMESEMVLAKTGT"
BASE COUNT         1436 a         2084 c         2122 g         1683 t
ORIGIN      
        1 ctttgactgg aacaagtata aggaagaccg ccgggtggaa ggcgagaaga tgcagcccaa
       61 gcgggggcgt atccgcccgg tggcagggct cggcaaggaa gcatacttcg cccgccatgt
      121 tctgcacgtg cttacagaga agggcgtgct gacggtgatc gtattcaaaa ccgcaggcga
      181 cgcggcggca ggagaagaga ctgaaaccaa agccgaagct gcggagaagt ctctggcaga
      241 aaaagccttg ccgcgaatgt aagccgccgt gcctctactg gcgaacgtaa attgcggttt
      301 gctcgtgagc agcgcccccg gcatccttgg tttgttcacg aacggtaatc gttttgccgt
      361 ctttggataa cgtgattgtg ccggtgcccg agcttccgtc agcgcccttg attactgagg
      421 tgaactcgtg cgaggagggc attttgtagg tcacggttgc cacggtgttt ccgtccgcca
      481 tctgcggtga cggggtgcct ggcttgccgt cataggtgac gctgtaagat ttgccgtcag
      541 catcggttcc tttgatggcg tacttgacgg aggcttttgt agcggcgtcc accgtaacgg
      601 tttcttcttt aggggcctga ccgctgaatt ttgattttgt ggtgtcgagt ttgaaggtgc
      661 cggcccacgg gtcagtgccg tgctgtttct tggtttgact gaacgcaacg gttaagttca
      721 gcaggaggaa caaaaccaga acatgtctca tagtacctcc gattttgaat tgctgaaatt
      781 agagccgcag gagccaccac gtgtcaactg tggaggcctc cgcaaaaaat cccccgacgg
      841 cgcgcgtcaa acgccgccgg gggctagcgt caggaggagg acacttgttg aatctcgttg
      901 tcagcgagtc tgcttctgca atgacgcggt tgccgaaggc gctccgccga gcttggccag
      961 ttcgctggcg aagagtggat tgtcaggaaa ctccgtggcg agttccgtga agtgcgtgcg
     1021 cgccacgtcc ggtttcttct gctttagcga cgccagagcc agcaacatct tggcgaaggg
     1081 ccgcaggtaa tgcccgcggg tagcggcaat ttgcagttcc ttgatgccct gcttctcgtc
     1141 gccatgaatg cccttgaagc cgaggaaaaa tttctggtgc ccaggcaggc tgcccacaat
     1201 gtaatcggaa aagcccagcg cgagataggc atctgcgttg tttgcgtcaa tggcgagcag
     1261 ctgttttgca tatttggccg cgtccttcat catgcccagg ctctcgacct gttttttgtc
     1321 gatcagcccg gcatagtcgg cctgcatgcc caggctcatg gtcatagcga aaagcgcatt
     1381 cgcgtcgttg ggcgcatcct tcagccgcgc cagagcaagc tgctgtgctc gcccaaaggc
     1441 ggcgaagaag ccggcgcgct tttccggatc gctcttcagc ggagtcttgt cattgttgtg
     1501 cttgtcgtcc aggaaaaatt ctgatgttaa gacgccctgc ttgtagcact cttccagcag
     1561 ataattcgcc gcctgcagcg cgctcgccag cgggtcttca ggatgggctt tctgccaggc
     1621 atcgaactgc tctcgcgctt ctgaaggctt taattcataa agcagatgga agccgctttc
     1681 caactctggc gctgcgaccg cgaccggcgc cgctttgagt gtttcctgcg cagttacagg
     1741 tgttgcaaat gcaatgacgg ccagcacgcc ggccagggcg aacccaaaga tcgtgctgct
     1801 gttcctcttc cgctgctcga aatgcggagc agtgtgattt tggtgacgac gattcaatgt
     1861 gacgacaggg gttttgctca tgttctccga ctctgatttt gaaattcagt ttgcgcgaat
     1921 caccgtgacg agacagggct gcccgcccgg gaatagtttt ggttcaaagt tctgctttgc
     1981 ctgttagttg ctgttgaact gtttcgcgtg ttgctttgaa tgacgctgag aagtttttgc
     2041 tacgaagatt actgctctgc ggaaaacacc tcttaccgct ttgggggatt tgctacccgt
     2101 gtagtaatta gaacgctggc aagagtaaaa cgttgcggaa tttttcgcaa aaaagctatg
     2161 caatttgctg cacagtgcag gcgaaggagg aggcgaatct atgtgatagt cgggcgcagt
     2221 cgccgctagt cgaaccagtc aatctctttg atgtcttcag ccggaatttg ttcaagcact
     2281 tcgcggtagg cacgatgaat ttcttctttg ggcgtggtgc attcctggtg aatgcggatg
     2341 tcggtatcgt aacgccatcc gttctccgca caggcgggga agtcaacaat gcggattcgc
     2401 acaccaggat acggagtcgc gaccagataa tcgccgtacc agtggctgtc gccgatgcgc
     2461 cattgccatg caagctggtt cagccgcagg caaagcgcgc tggtcgagct gtatttgcag
     2521 aggaaagagt acgctccggt cacgcgccac aattatgacc gcgtgctggc cggggcacaa
     2581 ggttgtacgc gcccgggaag tcgcgggggc cgaaggcggc gcaaaagatg ttgaagcccg
     2641 gctctggcct gccgacgcgc tcaccgttta tattgaagtt tcctcgcaat tccgctcccg
     2701 gattccacaa gtgaaaggga tatgatcgtg ggttgcgaaa tttcccccgc ggaggaacat
     2761 tgctttactg gctgctttac cagaggctct acgcccactt tcctccgttc cgcatttttc
     2821 gttacgtcac cttccgcact gcctttgcca gccttaccgc actcttcatg gggctgatca
     2881 ttggcccggc cattatccgg caactgcggg aatttcagat cggccagtac atccgggaag
     2941 aggggcccaa ggcccaccag aaaaaagccg gcacgcccac catgggcggc gtgctgatca
     3001 ccatcgccat cattgtcccc acactgctat gggccgacct ttcgaatcct tatatatggc
     3061 tggttgtcat gtccaccact gcgttcggcg ccattggctt tgctgacgac tatataaagg
     3121 tggtgcagaa gcgaaacctc ggcctgaccg gacgcaccaa actgctgctg cagttcttaa
     3181 ccgccggcgg tgtggctgtg gcgctggtct ttcttaccgc caaccgccag tactccacgc
     3241 acttgatggt gccgttcttt aagcagttcc gtcctgacct ggtgattgaa agcctgcggc
     3301 actatccgca tatctggtgg ctggcgttca tcccgtttgt tctcttcgta atgctggtgc
     3361 tggtcgggtc aagcaacgcc gttaacctca cggacgggct cgacggcctg gccatcggct
     3421 gcacggtcat tgctgccggt gcgctcaccg tgcttactta tgtcagtggt cacgccaaat
     3481 tctccgaata tctagaactc cagatcatgc cgcaggtggc tgaactgact gtcttttgcg
     3541 gcgccatggt aggctccagc ctcggctttc tctggtacaa cgcgcacccg gcggaaatct
     3601 ttatgggaga cgtgggctcg cttgcgcttg gcggcgccat tgggacggtg gccgtgatta
     3661 tcaagcagga actgctgctg cccttcatcg gaggcgtttt tgtgattgag gcgctctccg
     3721 tgattctcca ggtgggttcg tacaagctgc gcaagaagcg gatcttcaag atggcgccgc
     3781 tgcatcatca ctttgagctc tccggctggt cggaatcaaa gatcatcgcg cgcttctgga
     3841 ttctctcgct gatttttgcc ttcttcgctc ttaccacgct caagttgagg tagcgccgtg
     3901 cctgattcgt ggcacaatgg gaaacgcatg gaattgaaga acaagcgcgt gctggtggtg
     3961 gggctcgggc gttccggcgc cgcgtcggcc gttttcctcc aggagcacgg cgcaaaagtc
     4021 acggtgtctg atacgcgcag cgaagcgcag ctccagcacg aaattcctgc gttgcttgac
     4081 cgcggcatct ccattgagac cggccgccac ggcgagcgca cctttcgcga tcaggacttg
     4141 atcgtcgtca gcccgggagt tccgtctgac cagccacagc ttcatcacgc ccggagtctg
     4201 ggcattcccg taattgggga agtcgaactg gcgttccgtt ttctaaaagg aaaggtgctg
     4261 gcgatcaccg gctcgaatgg caagaccacc acgaccaccc tggtaggcga gattctggcc
     4321 aaaagcggca ggaagacgct ggtgggcggc aacatcggaa cacccgtaat ttcgctggca
     4381 gagaaatcct cggcggacac catgctggtt ctggaaatct ccagcttcca gttggagaca
     4441 attgaacagt tctgcccgtg gattgccgcc atcctcaaca tcacgccgga ccacctcgac
     4501 cgccatcaca cgtttcaggc ttacgtagat gccaaggcac gcctcttcga aaaccagcgc
     4561 agcaccgatt ttgcggtgct caatgccgac gacccgacct gtgttgattt gaagcgccgg
     4621 gtaaagagcg cgctctactg gttcagccgc agcggcgcgg tggagaatgg cgcatacgtc
     4681 aaaggcgacc agatcgtctt tcgccagaat gggcgggagc agaacgtgct cagcgtaagc
     4741 gacattcacc tgaagggcgc gcataatctg gaaaacgtgc tggctggcgt taccattggg
     4801 atgttggccg gttgcgagcc acagcaggtg aggcaggccg tcagcgaatt ccgcgccgtt
     4861 gaacatcggc tggaactggt agccaccgta agcggagtca ccttctataa cgactctaaa
     4921 gccaccaacg tggacgctac cacgaaagcg ctggaatcct tccccgggaa catccacatc
     4981 attcttggcg gcaaggataa gggcagcgac tacactgtgt tagccccgct gctgcatgaa
     5041 cgcgtgcgtg gcgcgtatct gatcggggcc gcggcggaga agatcgcctc gcagatcaag
     5101 ggtgctgcgc ccattgtcca ttccggcacc atggagcgcg ccgtccgtca ggcatttgaa
     5161 gccgcaaggc aaggtgacat cgttctgctg gctcctgcct gcgccagttt tgaccaattt
     5221 gaaaattacg aacagcgcgg tcgtatcttc aaggaactgg ttcactcatt gtctccggtt
     5281 gccacggggg atcgcgctta gtggccaaac aggtcggcat cgataaatgg ctcttcggtt
     5341 ccaccctgtt gcttgttctg atcggagtag tcatggtctt cagcgcctct gccgtaatgg
     5401 cgggtgagcg cttcgggtct gcctactact tcttgctgcg acagcttggc tgggcgctcg
     5461 ccggtctggc agccatgact cttagtgccc ggctcgacta tcgcgtgtgg aagaagcctg
     5521 caatcgtttt tacatttctc ggcgtcacaa cgctgctgct ggtcgcggtc ttctttttcg
     5581 atcgctccca caacacgcat cgctggttcc ggttgggatt tgcctcgttc cagccatcgg
     5641 agcttgccaa gccggcgctc attctttttc tcgcgttctt tctggcggat cgcatgaaag
     5701 ccatcgacga ttggcggcac acgctgctgc cggcgatagt gccgccggtt cttttttgcg
     5761 tattgatcgt gaaggagccc gatctcggca ccgccatagt ctgcctgggc gcgactgccg
     5821 gaattcttta cgtggctgga ctgcgtctgc gctatttcgg ctacgcgctg ctcccgctcg
     5881 tccctgcact tgtgtatctg ctctccgtgc cgtaccgtcg tgctcgtatc aaggtttttc
     5941 tgaaccctgg aagcgacccg cagggcgcag gctttcacgt aagccagtcg ctcattgccg
     6001 tgggaaccgg cggactcacg ggcctgggac tgatggaagg gaagcagaag cttttttttc
     6061 tgcccgagcc gcacaccgac tttatctatg ccgtggcttc agaagagctt ggactgatcg
     6121 gcgcggcgtt tattgccact ctattcctgg tttttgcctg gcgcgggttt cgtgttgcca
     6181 tgcgcgccaa ggaaccgttt gcgcggttcc tcgctgccgg aataaccacc actgtggtct
     6241 tacaggcatt cttcaatatg agcgtggtgc tcgcgcttct tcccaccaaa ggcattcctt
     6301 tgcccttcat ctcctatggt ggttcttcac tattcgtaac cctggcgagc gtgggcgtgc
     6361 tgctcaatat ctcgcagcac gcggactaaa atcgcgcaaa gaaaagccgc gacttgcgcc
     6421 gcggctcctc gtagaacacc attcaggact atgtcccggt tttggccagc accatctctg
     6481 attccatctc ggcccgtttc ggcagcggca tggctttgag tgccaggatc atgaaggcgg
     6541 aaaccagcgc cagcgcggcg gtaccgtaga agtcagcgtt ccagttgccg aacttctcga
     6601 acagcttggc ggcaatccag ccaccgccaa ttgaagccac gcccttggct gtgtacagga
     6661 atccgtagtt tgaagttgcg tgatcggcgc cgaagtaatc gcccacgatt gccggaaaca
     6721 gtgagaacat gctgccccag gtgaagtaga tcgctatcat ggtggcgatg aaccaggctc
     6781 cagacaacct gccgagcgta agcacggcta ctatgcagcc agcctgaaga gcgaagggaa
     6841 tcaccatggc catctcacgg cccacatagt cagagagcca tccccagaaa atgcggcccg
     6901 cgccgttcgc tccgcggctc cacgccagcg ccataacgat cgcagctgcc gggatcgcca
     6961 ttcccctggc aaccggagcg gcctgcgcgg taatcatcag cccgccaact gaggtcaata
     7021 cgaaagcgac atacatcagc cagaactgcg gcgtggacat catttggaga ctggtgaact
     7081 gcgcggtgtt gcggcgcagc tttggcgaca ccggtttttt cgcggcagga gaaaccttga
     7141 aatccggtcc cggattctgt agcacctggg ccgccaccag gatcaccaat ccctggccga
     7201 ttcccgtgta caaaaaggct tccttgtagc ctgacgtctt gaggatgtcc gcgatcagcg
     7261 ggataaacag catggatccg gcgccgaatc cggcggtaat gaaaccggaa gcccgtccgc
     7321 gcatg
//
LOCUS       DASQYP010000339         7034 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_122934, whole genome shotgun sequence.
ACCESSION   DASQYP010000339 DASQYP010000000
VERSION     DASQYP010000339.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 7034)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7034)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7034
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_122934"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(200..1555)
                     /locus_tag="VE783_11045"
     CDS             complement(200..1555)
                     /locus_tag="VE783_11045"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53977.1"
                     /translation="MKLLRITVLLAIATTAAITLYSEQKHRAAAPFDKTIQAHSEALV
                     QQGRETFRFDTFGDQDFWGGVLGLHKAIEGAKFGGVGQGVSPATALAVGLKVDQDALP
                     PALVQAIQAGQVDLNDPATTLALLKLNAVLGVTGFFNNDGSLQSVGIQCALCHSTVDN
                     AFAPGIGHRLDGWANRDLNVGAIVGLSPNLQPVADLLGVDVPTVKTVLNSWGPGKFDA
                     ELFMDGKAFRSDGKSAATLIPPAFGLAGVNLHTWTGWGSVPYWNAFVANLEMHGKGNF
                     SDARLDDASKFPIAARAGFGHVHSDVDLITPKLGALHAYQLDIPAPAPPKGSFDIAAA
                     ARGEKLFSGKANCASCHTEPLTTEPGWNMHTPAEVCVDDFQANRAPDGRYRTSPLNGL
                     WTHTQGGFYHDGRFATLGDVINHYDTCFSLGLSTQEKSDLTQYLLSLPNGKRDSDRDR
                     D"
     gene            complement(2119..3168)
                     /locus_tag="VE783_11050"
     CDS             complement(2119..3168)
                     /locus_tag="VE783_11050"
                     /inference="COORDINATES: protein motif:HMM:NF042697.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6599 family protein"
                     /protein_id="HYX53978.1"
                     /translation="MIKRFSVVLVMLCSSLLWGTDSSGVLPQSFNGWQIEKGSQKSGD
                     DPAAVDAADSAVLKEYGFAGFESATYVRNGRKMQVKAARFNDATGGYGAFTYYIQPLM
                     RPEKIGDLGASNNRRILFYRGNILVDVTLEQVTAMSAADLRALADALPQIHGNISALP
                     TLPGQLPKQSLISNSQRYIVGPAALDRLGVPLPASLVNFSMGPEVEFATYRTSEGEAK
                     MTVIGYPTPQISAERMKAMQAANLPGGPFFFKRSGPLLAIINGNIPESEAQSLLASVN
                     YDADVTWNQPTKPNPRDNIGGLIVGIFTLVGVILVFALIFGFAFGGARVVAKKLFPNR
                     VFDKPEDVEIIRLDL"
     gene            3355..3936
                     /locus_tag="VE783_11055"
     CDS             3355..3936
                     /locus_tag="VE783_11055"
                     /inference="COORDINATES: protein motif:HMM:NF016214.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal-dependent hydrolase"
                     /protein_id="HYX53979.1"
                     /translation="MATLLTHGLVGAVLGRDSQAGPQQRRRLLLAAATCSMLPDIDVI
                     GLRLGVPYGSLWGHRGLTHSLLFAAMVAVVLAFVLAVKASERVRTGLLLFVVTASHGV
                     LDAFTDGGLGVAFFSPFDRTRYFFPWTPISVSPIGLTRIFSGYGVQVFWTELIWVWLP
                     VLLVAFVMARYRRATPATPESVTAKARSAAAGQ"
     gene            4013..5269
                     /gene="ispG"
                     /locus_tag="VE783_11060"
                     /gene_synonym="gcpE"
     CDS             4013..5269
                     /gene="ispG"
                     /locus_tag="VE783_11060"
                     /gene_synonym="gcpE"
                     /EC_number="1.17.7.1"
                     /inference="COORDINATES: protein motif:HMM:NF001540.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046429 - 4-hydroxy-3-methylbut-2-en-1-yl
                     diphosphate synthase activity [Evidence IEA];
                     GO_process: GO:0044237 - cellular metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flavodoxin-dependent
                     (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase"
                     /protein_id="HYX53980.1"
                     /translation="MASIQRRRSVLAKIGNVRVGGDAPVVVQSMTNTDTADVQGTIQQ
                     VAQLTRAGSELVRVTVNNDAAAKAVPAIVEGLAKQNIFVPIIGDFHYNGHLLLTKYPE
                     CARALAKYRINPGNVSVGRKDDNNFRAMVEVAIKNDKPVRIGVNWGSLDQQLLTRMMD
                     ENSRSPEPKDARDVTMEAMVVSALRSAEIAEETGLPHDYILLSAKVSGVQDLIDVYRN
                     LAARCDYPLHLGLTEAGMGAKGIVGSTAGLAVLLQEGIGDTIRVSLTPAPNGNRAEEV
                     MVAQQILQSLGIRSFTPQVTACPGCGRTTSTFFQEMAEQIQSYLRDNMPLWKQKYPGV
                     EELKLAVMGCVVNGPGESKHANIGISLPGTFEEPKAPVFVDGRLMTTLKGDKIVAEFI
                     EILNEYVDSRYGSASGRAVEGVAARV"
     gene            5692..6648
                     /locus_tag="VE783_11065"
     CDS             5692..6648
                     /locus_tag="VE783_11065"
                     /inference="COORDINATES: protein motif:HMM:TIGR00765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YihY/virulence factor BrkB family protein"
                     /protein_id="HYX53981.1"
                     /translation="MQLYKFNPKADHRKQERAKEHASPWKLGGLGPLALGKRVYHEID
                     EDEVFTRSAALSFYFVTALVPMLFFMVAVLGFFAQSQNLQADMFGYAQRVLPPDAFTL
                     LQKTLKEIASNATGLKLALGLVLALWSGSGGISSIMDALNRCYHVKDSRPYWKQKLIS
                     IVLTVALAALTVVALVIILYGGDIAEFVGAHTGLSDVTVLAWKVVQWPLAFFCLVVSF
                     ALLYFWGPDAEQEWTWITPGSLFGVLLWIGASLGFRVYLHYFNSYSKTYGSLGAVIIL
                     LYWLFITGLAILIGGEINSEIENAAAERGHPDAKQEGEKVAS"
     gene            complement(6650..>7034)
                     /locus_tag="VE783_11070"
     CDS             complement(6650..>7034)
                     /locus_tag="VE783_11070"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HYX53982.1"
                     /translation="AGSLELLRSAVENVIRNAVRYTPQGSAVEVALQWRLDTAVLTVR
                     DHGPGVPQAELGHIFEPFYRVSEARERTSGGVGLGLSIAERTVKLHGGSIRAENAPDG
                     LLVTLELPLVSTAAPAQNAPEPVHS"
BASE COUNT         1504 a         1991 c         2058 g         1481 t
ORIGIN      
        1 ggcggaacaa gttcgagcgt attcgagacg tgacggaagg gcccgacgga ttcctgtatt
       61 tcagcaccag caacctgcac acggatgtta ccggccacgc gggagatgac cgcattgtgc
      121 gcgcacaccc ataaagacga acgcaaaaaa taaggagcgg gcacattggc ccgctcctcg
      181 cccaagagtg ctgctggtat cagtcgcgat ctcgatcaga atcgcgcttt ccatttggca
      241 gggacaggag atattgggtg agatcgctct tttcctgcgt gctcagtcca agggagaaac
      301 aggtgtcata gtggttgatg acgtcgccca gagttgcgaa gcggccatcg tgatagaaac
      361 cgccttgggt atgtgtccag agaccattca aaggcgaggt gcgatagcgg ccatccggcg
      421 cgcggttcgc ctggaagtca tcaacgcaga cctccgccgg ggtatgcatg ttccagcccg
      481 gttcggtggt cagcggttca gtgtggcatg aggcgcagtt ggctttaccc gagaacagct
      541 tctctccgcg agcagccgcc gcgatatcga agctgccctt cggcggcgca ggcgcgggaa
      601 tatccagctg ataggcgtga agcgcgccca gcttcggcgt gatcagatca acgtcactgt
      661 ggacgtgacc gaatcctgcg cgagccgcga tgggaaattt cgatgcgtca tccagacgcg
      721 cgtcagagaa attgcccttg ccgtgcattt ccaggttggc gacgaaggca ttccagtaag
      781 gcacagatcc ccagccggtc caggtgtgga ggttcacacc ggccagaccg aatgcaggcg
      841 gaatgagcgt ggccgcgctc ttgccatcgg aacggaaagc tttgccgtcc ataaagagct
      901 cagcgtcaaa ttttcccggg ccccagctat tgagcacggt cttgactgtg ggtacatcca
      961 cgccaagaag atcggcaaca ggctgaagat taggcgagag tccaacaata gcgcccacgt
     1021 tcagatcacg gttggcccag ccatcaagac gatggccgat gccgggtgcg aaggcattat
     1081 caacggtgga gtggcagagc gcgcactgaa ttcctacaga ttgcagtgaa ccatcattat
     1141 tgaagaagcc agtcacgcca agcacggcat tgagtttgag caacgccaga gtggtagccg
     1201 gatcgttcag gtcaacctgt cccgcctgaa ttgcctgcac caatgcaggc ggcagcgcat
     1261 cctggtccac tttaaggcca acggccagcg cggtcgccgg cgaaacgccc tgtccaactc
     1321 cgccgaactt cgcgccttca atggctttgt gcagacccag cacgccgccc cagaaatcct
     1381 ggtcgccaaa agtatcaaaa cggaatgtct ccctgccctg ctgaaccaga gcttcactgt
     1441 gggcctgtat ggttttgtca aagggagcgg cagctctgtg cttttgttcg gaatagagtg
     1501 tgatcgcagc cgtggtggcg atcgcgagca agacggtaat cctgagcaat ttcacggggg
     1561 taacctcacg aatcggagat gttcgagtga gcttcccgga atagctccgt taaggatgga
     1621 gtacggagag gacttttggt ttcgcgctgc agagattttt atcgttatgc gatgaactta
     1681 gtgcaacttg gggtggtcac agcggtggag aagagggctc tcccgggaag atcgggtacg
     1741 caggtctgga tcgacatact ttgtccgggg atcaatacgc tcttgagcac ttgtcgagaa
     1801 aaatacagcg tgcgcggaca aaagcggtaa aaagaagaaa aatgcccggg tgaaaagtag
     1861 aaaggccacc cggcaacagg gtggcctttc ctttcaaggg agaatagttc caacggaggt
     1921 tcaaaaaacc atcagaactt tctggaaaaa atcttatggg tggtagaaag gcagtgtcaa
     1981 gaaatttttc gagattaaat gcctttcttt tcagcaactt aacgaaaacg tcaatagccg
     2041 cataaaagtg acaaaaaatg tcactctggc caaacccgtg ctataaacgc gctgatttca
     2101 ccaacttacg cctgtttgtc agagatcaag gcggatgatc tccacgtcct caggcttgtc
     2161 aaagacccgg ttcggaaaga gcttcttggc aaccactctt gcgcccccga aagcgaagcc
     2221 gaagatcaaa gcaaacacca gaatcacacc caccagcgtg aagattccaa cgattaatcc
     2281 accaatgttg tcgcgaggat tgggcttggt cggctggttc caggtcacgt cggcatcgta
     2341 attcacagaa gcgagcaagg attgggcttc gctctccggg atatttccat tgatgatcgc
     2401 aagcagcggt ccgctgcgct tgaagaagaa gggaccgccg gggaggttcg cggcctgcat
     2461 ggctttcatg cgctcggcgg agatctgcgg cgtgggataa ccgatcacgg tcatcttggc
     2521 ttcgccttcc gaagtgcgat acgtggcgaa ctccacttcc gggcccatgc tgaagttgac
     2581 caggctggcg ggaagcggca cgccgaggcg gtccagagct gccgggccca ctatgtagcg
     2641 ctgcgagttg cttatcaggc tctgcttcgg aagctggccg ggcaaggtgg gcagtgcgga
     2701 aatattgcca tggatctgag gaagggcatc ggctagagcg cgcaggtccg ccgcagacat
     2761 tgccgtcacc tgctccagag tcacatccac cagaatgttt ccacgataga agagaatccg
     2821 gcggttgttg gaggcgccaa gatcaccgat tttctccggc cgcatcagcg gctggatgta
     2881 ataggtgaac gcgccatatc cgccggttgc gtcgttgaag cgcgccgcct tgacctgcat
     2941 cttgcggccg tttcggacgt acgtagcgga ttcgaagccg gcaaatccgt attctttcag
     3001 aactgcggaa tccgctgcat caacggccgc tgggtcatcc ccagacttct gagagccttt
     3061 ttctatctgc cacccattga aggattgcgg cagaacgccg ctggagtccg tcccccagag
     3121 aaggctcgag caaagcatta ccagaacgac tgaaaaacgt ttaatcattg cggagaaaca
     3181 cacaaatact tctctattag acaccattcg ggtagcgcag gattcggctc tgatgcggat
     3241 tgcggcccac tgccgaccgg cgctgcttcc accctaacac ctatccaaat gagtctcagg
     3301 tgcatggctg attccagcac tgttttccga tatttatcct gagagtactc gcaaatggcc
     3361 actttgctca cccatgggtt ggttggggcg gtgctggggc gcgactctca agctgggccg
     3421 cagcagcgcc gacgtttgct gctggctgcg gcgacgtgtt ccatgttgcc ggacatcgat
     3481 gttattggcc tgcggctcgg cgtaccctac ggaagcctct gggggcatcg cggtttgacc
     3541 cattctcttc ttttcgctgc gatggtggcg gttgtgctcg ccttcgtgct ggctgtgaaa
     3601 gcctcagagc gcgtgcgaac cggattgctg ctgttcgtgg tcactgcgtc tcatggagta
     3661 ctggacgctt ttacagatgg cggccttggc gtggctttct tctctccctt tgaccgaacc
     3721 cgttacttct ttccctggac gccaatctcc gtctcgccta tcggactgac tcgcatcttc
     3781 tccggatacg gggtgcaggt tttctggacg gagctcatct gggtgtggct gcctgtgctc
     3841 ctggtcgcct tcgtcatggc ccgataccgc cgcgcaacac ctgcaacgcc cgaatccgta
     3901 acggcgaagg cgcgctctgc ggcggccggc cagtgacgcg ccttaggcca ctctcgccgg
     3961 ggatcctggg cggtccgaat caggtaaact agatggcata aactaaataa caatggcttc
     4021 catacagcgt agaaggtcag ttttagcaaa aatagggaat gtgcgcgtgg gcggcgacgc
     4081 gccagtggtc gtgcagtcca tgacaaacac tgacacggcc gacgttcagg gcacaatcca
     4141 gcaagtggcg cagctcaccc gcgccggatc agagctggtt cgcgtgacgg tgaataatga
     4201 cgctgccgca aaagctgtgc ccgccattgt ggaagggctc gcgaagcaga acattttcgt
     4261 cccgattatc ggcgattttc actacaacgg ccatctgttg ctgaccaaat acccggaatg
     4321 cgcccgtgcg ctggccaaat accgcatcaa ccccggcaac gtgagcgtgg gccgcaaaga
     4381 cgacaacaac ttccgcgcca tggtggaagt agccataaag aatgacaagc cggtgcgcat
     4441 tggggtgaac tggggatcgc tggaccagca gcttcttacc cgcatgatgg acgaaaactc
     4501 gcgcagcccg gaacccaaag atgctcgcga tgtgaccatg gaagccatgg tggtaagcgc
     4561 gctgcgttcg gctgagatcg ccgaagagac cggcctgccg catgactaca ttctgctgag
     4621 cgccaaggtc agcggcgtgc aggacctcat agacgtttac cgcaacctgg cggcgcgttg
     4681 tgattacccg ctgcacctgg gccttaccga ggccggcatg ggcgcgaagg gcattgtagg
     4741 cagcacggcg ggactggcgg ttctgctgca ggagggcatc ggcgacacca ttcgggtttc
     4801 gcttaccccg gctccgaacg gcaatcgcgc ggaggaagtg atggtggcgc agcaaatcct
     4861 gcagtcgctg ggaatccgaa gcttcacccc gcaagttacg gcctgtcccg gctgcggccg
     4921 caccaccagc acgttcttcc aggagatggc agagcagatc cagtcttatc ttcgcgataa
     4981 catgccgctc tggaagcaga agtatcccgg agtagaagag ctgaagctgg cggttatggg
     5041 atgcgtggta aacgggccag gcgaatccaa gcatgccaac atcggcattt ctcttcctgg
     5101 cacgtttgaa gaaccaaagg cgccagtctt tgtcgacggt cggctgatga ccacccttaa
     5161 gggcgacaaa atcgtggctg aattcattga gattctgaac gagtacgtgg attcgcgtta
     5221 cggatcagct tccggcagag cagtggaagg cgtggccgcg cgggtttaag gcttttatcc
     5281 tgctcgcttc gcgagaaacc gctatcgttc atggtcgccc aaagcgcgtt tatgctcctg
     5341 ctgcgcgccg ctcggcacgc aagtcggcct cccggctcat acgcctcacc tttttacatt
     5401 tctttttatt gcgcgaggct atctctcccg aggcaacttc gtcctataag tattcattct
     5461 tttctctctg accctgatgg gggcgggagc ggaagccgac atttgcagtc agcaacctgc
     5521 gccgggtttg gtctctttga cctcacaacc aggccctgac tggtttctgg atgagctgtc
     5581 agccttctct gttcccgctt ccccagggtg gtgccccgcc caggtcagca gtttccctcc
     5641 gatgaagccg ctcatctaaa tcactcacgg acttgaaacc ggaggagagc tgtgcaactc
     5701 tacaaattca accctaaagc cgatcaccgg aagcaagagc gcgccaaaga acacgcatcg
     5761 ccgtggaagc tgggcggact gggccctctt gcgcttggca agcgcgtgta tcacgagatc
     5821 gatgaagacg aggtattcac ccgctctgcc gcgctttcct tctactttgt gaccgcgctc
     5881 gtccccatgt tgtttttcat ggtggctgtt ctgggattct tcgcacaaag ccagaacctg
     5941 caggcagata tgttcggcta cgcgcaacgc gtgctgccac ctgacgcatt cacgctgctg
     6001 caaaaaacgc tcaaggagat tgcctccaat gcaacggggc tgaagctggc tctcggcctg
     6061 gttctggcct tgtggtccgg ttcaggcggg atcagttcga tcatggacgc gctgaatcgc
     6121 tgctatcacg tgaaagactc gcggccctac tggaagcaga agctgatctc gatagtactg
     6181 accgtcgcgc tggcggccct caccgtggtg gccctggtga tcattcttta cggaggtgac
     6241 attgctgagt tcgtgggcgc gcacaccggc ctgagtgacg tgaccgtact tgcatggaaa
     6301 gttgtacagt ggccgctagc gtttttctgc ctggtggtga gcttcgctct gctgtacttc
     6361 tggggaccgg atgccgaaca ggaatggaca tggatcacgc cgggatcgct attcggggtg
     6421 ctcctctgga ttggcgcctc gctcgggttc cgcgtttacc tgcattactt caacagctat
     6481 agcaagacat acggttcgct gggcgcggtg atcattctgc tctactggtt gttcatcacc
     6541 ggactggcaa tcctgatcgg cggagaaatc aactcagaga ttgagaacgc agccgcggag
     6601 cgcggccatc ctgatgccaa gcaggaaggc gaaaaagtgg cttcctgagc tagctgtgga
     6661 cgggctctgg cgcgttctgc gccggggccg cagtggaaac cagcggcagt tccagcgtga
     6721 ccagcaaacc atctggcgcg ttttccgcgc gaatgctgcc gccatgcagc ttcaccgtgc
     6781 gctcggcaat cgaaagtccc agtccaactc cgccgctggt gcgctcacgc gcttcgctca
     6841 cccgatagaa aggttcaaag atgtgcccca actcggcttg cggcacgccc ggcccatggt
     6901 cccgcacggt gaggacggcg gtatcaagcc gccactgcag cgcaacttcc acagcgcttc
     6961 cttgcggggt gtaacgcacc gcattgcgaa tcacgttctc caccgcgctg cgcaacaact
     7021 caagtgaacc ggcc
//
LOCUS       DASQYP010000340         4881 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_269690, whole genome shotgun sequence.
ACCESSION   DASQYP010000340 DASQYP010000000
VERSION     DASQYP010000340.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 4881)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4881)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4881
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_269690"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(373..1359)
                     /locus_tag="VE783_11075"
     CDS             complement(373..1359)
                     /locus_tag="VE783_11075"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53983.1"
                     /translation="MELRKDPITRSWVIVADETERAAQPGYCPFCPGSPNAPQIITTL
                     NSGEPGAGPVMAMVHPAPLYRIEGEPHRRAEGIYDAMNTVGAHEVLVQSIRHDIELWQ
                     SSDAEISHFLALAAQRITDLKQDTRFKYVTMFKNYGPRAGQDFDHPVSEITATTFVPR
                     RVLYELRASRDYFADKERCVFCDTLNQELRNPIRIVEANSSYVALCPYASRLPYETWI
                     MPRRHESSFERSITMKSAQLPELASLIRHTLQRINTVSEAFHLVLHTVPNTYQKSNIL
                     QYWRTVDEDYHWHIEILPVVATKAKPYFLKEVYFTPLPSEVAAERLRKLEVR"
     gene            1537..2529
                     /locus_tag="VE783_11080"
     CDS             1537..2529
                     /locus_tag="VE783_11080"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53984.1"
                     /translation="MRQRALWFTAVVLFSISKSLILAQDLTVAFKVRTAPPTAGGPVW
                     PQELEQKIYVQGHKQRVEYMGVPGGYWFREFWYVSPSKHSQWPPHMAVVMDCATLQAY
                     ELNLDEGEYREFELPPYPSPSKFQKRLRRAEKYLAMRPVKIQDTGETATIFGMKARHL
                     IATGTGETYRTKVKTIVDGWYVDMPEPGCAPEYLRGHEAMVWTDLGVFASWRSWGIAR
                     YSGTSLNDLFGYQMYSAGTWEGDLPIPAGVRLASAIPYQAEADTRLLWNQWPHGLAVD
                     ISVTQEFKPQDSFVAAYAEDAIDVRMTEYSQEPLNPKLFEVPPGFKKVRVLFNH"
     gene            complement(2940..4349)
                     /locus_tag="VE783_11085"
     CDS             complement(2940..4349)
                     /locus_tag="VE783_11085"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53985.1"
                     /translation="MSSPWLPALNGVTVAAGLSIWAPLELHRFRSLAGILVWTCATIL
                     FVLAASAFTIWLASRFQPEHLRPEFSPAVWQASLVAVWMPPLILFFGENNTFMFLPAL
                     MLATGVARLGAGYQSEKQPSRSVAQRDMFGQLRHPRRSVWPFAAAACFHGAALAWTMG
                     AKAETAGFTGATAGILVWWIYRGKAANQRRWSGITRCAATTCLAILVTMTGLMRYLAS
                     GAGFERDDLVGNFLLQILFPRHPILPRVAYAAPASDPSSLSHGGMFNGVVMTPRDEKV
                     IMLAPPPLLRPEITVGSAKPLKLLFQGVYWFYKPPYDRPPQGSAKSKADPQLVGLRSS
                     DDLPLVMEAHQLLSEAVRLNCCRAMSVTISNRDLYPGTVWLELILTDTHSKLAAPISL
                     GTQPVQSRLEMKEGAPESVQETLNFPFPKNTAARQFDEITVRYRLSYMREHSSARIAI
                     ENFELLPGSPAGSDHLRGK"
     gene            4689..>4881
                     /locus_tag="VE783_11090"
     CDS             4689..>4881
                     /locus_tag="VE783_11090"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53986.1"
                     /translation="MVRRLAFLLLGSPLVVSAACQPSQAAAAAPANSPGVQLPAPAPS
                     LKVTTRMVVVDVIATDRKGL"
BASE COUNT         1072 a         1329 c         1471 g         1009 t
ORIGIN      
        1 caatcaacgc cacaaaatgg aagttcatgc ccagggctac cgccgggatg gtgacgcggg
       61 tcaaaatctc gcgtccgccc cagaacgcag caagggcata gacgaggcct actccgtaga
      121 gcaccaacgc gactcgcaac cagaacagcg gcatatactt aggagcttac gaacgagatt
      181 atagccatct ggcgcactgc ggcaatgtga tagagagcac acgagtctgc ctttggtaat
      241 tagcctttgg cccttggccc agtatcgcga ggttgagagg ccgcccgatt tccacagatt
      301 tttataaaaa cctttatttt caatgattta tgaaggggct acaggctaag ggccgatggc
      361 taaaggctcg ctttacctca cttccagctt ccgcagcctc tctgcggcga cctcggacgg
      421 taagggggtg aaatagacct ctttcaggaa gtagggcttg gccttggtgg ccaccaccgg
      481 cagaatttcg atgtgccagt ggtaatcctc gtccaccgtg cgccagtact ggagaatgtt
      541 cgacttctgg taggtgttgg ggaccgtgtg cagcaccaga tggaacgcct cagaaacggt
      601 gttaatccgc tggagggtat ggcgaatcag tgaggccaac tccggaagct gggcgctttt
      661 catggtgatg gagcgctcga aggacgattc gtgcctccgg ggcataatcc aggtctcata
      721 cggcagccgg gacgcgtatg gacacagcgc cacatagctg ctgttcgcct ctactatgcg
      781 aataggatta cgcagctcct ggttcagggt gtcgcagaag acgcagcgct ctttatcggc
      841 gaagtagtcg cgggaggcgc gcagctcata gagcacgcgg cggggaacaa acgtggtggc
      901 agtaatttcg gaaacgggat gatcaaagtc ctgtccggcg cgaggaccgt agttcttgaa
      961 catggtcacg tacttgaagc gggtgtcctg cttaaggtca gtgatgcgct gggcagcaag
     1021 agcgaggaag tgcgagattt cagcgtcaga ggactgccac agctcaatgt catgccggat
     1081 gctctggacc agaacttcgt gagcgcctac cgtattcatc gcatcgtaga tgccttccgc
     1141 gcggcgatgc ggctcgcctt caatccggta aagcggcgca ggatggacca tggccatcac
     1201 cgggccggcg ccaggctcgc cagagttgag agtggtgatg atctgcggag cattgggtga
     1261 ccccgggcag aacggacaat acccgggctg ggcggcacgc tccgtctcgt cggcaacaat
     1321 cacccacgag cgggtgatcg ggtctttacg cagttccatg ctgctttaag gaaaacagag
     1381 gcgagcgagg gaggtcaata gcggagagcg agttacgttt taatatcgct ccggcatatg
     1441 agcccctccc gtcactggca ccggaaggag cttcttaacg atagttgact tgtcctgtgc
     1501 cacgccgagt gctgcaatat gaagtgaggt actctcatgc gccagcgcgc tctgtggttc
     1561 acggcagtcg tgcttttcag catttccaag tctcttattc tcgcacagga cctgacggtc
     1621 gcattcaaag ttcgcactgc gccacccacg gccggcggcc ccgtttggcc gcaagaattg
     1681 gagcaaaaaa tctacgttca gggccacaag cagcgagtgg agtacatggg agtgccggga
     1741 ggatactggt ttcgtgagtt ctggtacgtg tcaccatcaa aacattcgca gtggccgcca
     1801 catatggccg tggttatgga ctgcgcaacc cttcaggcgt acgagttgaa cctggacgaa
     1861 ggcgaatatc gtgagttcga actgcctcca tatccgagcc catcaaagtt tcaaaaacgt
     1921 ctgcgccgtg cggagaagta tctggcgatg cggccggtca aaattcagga taccggagag
     1981 actgcgacaa tctttggcat gaaagcacgg catttgatcg ccaccggtac aggagagaca
     2041 taccgcacaa aagttaaaac gatagtggat ggctggtatg tagatatgcc ggagccgggc
     2101 tgtgctcctg agtatctacg cggccatgaa gcgatggtat ggaccgattt gggggtattt
     2161 gcaagctgga ggagttgggg gattgcacgc tactccggca cgagccttaa cgacttgttt
     2221 ggttaccaga tgtactcggc tggcacctgg gaaggcgatc ttcccattcc agcaggcgtg
     2281 cgccttgcca gtgccattcc ttaccaagcc gaagcggata cccggctttt gtggaaccaa
     2341 tggccgcatg gcctggccgt agatatctca gtaacacagg aatttaagcc gcaagacagt
     2401 tttgtggcag cttacgcgga agacgcgatc gacgtgcgaa tgactgagta ttcccaggag
     2461 cccttgaatc caaagttgtt cgaagtgccg ccgggtttca aaaaggtgag agtgctgttc
     2521 aaccactgag atcgttcgcc agaaccggta gacgcactac tcttgtggac cttgcgagct
     2581 tgcgtgggct tatcgccgga ctttctgcct attggcacag ctccgttcac acccaacacc
     2641 agtgtattgc cgctggaatc cgcctcgagc ctgctatgca cgcatctgaa gcagattcgg
     2701 gttgtcatcc atcatgcggg cggcattcgc aagggagcgc agcgccgcgg tttctccgcg
     2761 agcacgtgcc aggaaggcag gccctgccgg atcaggtttt ctgtagggtg accatctacc
     2821 aagcttggaa tcgaaccaag tatcggccag caaaagcaaa acacggatga gattcaaccg
     2881 ggctgcgtac cggaccgacg cggctggcta tagcatttct ttgaacaagg gtatatgagt
     2941 tacttacccc gaagatgatc gctgcccgca gggcttcccg gcagcagttc gaagttttca
     3001 atcgcgattc tggcgctcga gtgctcccgc atatagctca gcctgtagcg gacggtaatc
     3061 tcgtcaaatt ggcgcgccgc tgtgtttttc gggaacggga agttgagcgt ctcctgcaca
     3121 ctttccggcg cgccttcttt catttcgagc cgggactgta ccggctgagt tcccagtgaa
     3181 atcggagccg cgagtttcga atgtgtgtcc gtgagtatca gttcgagcca gacggttccg
     3241 gggtagaggt cgcgattgct gatggtgacg gacatggctc ggcagcagtt tagtcgcacg
     3301 gcctcactca gcagttgatg ggcttccatc acgagcggca gatcatcaga agagcgaaga
     3361 ccaaccagtt gcgggtccgc cttgcttttc gccgagccct gcggagggcg atcataggga
     3421 ggcttataga accaatagac gccttgaaag agaagcttga ggggcttggc gctgcccact
     3481 gtgatttccg gccgcagcag cggcggaggc gccagcatga tgactttttc atcgcgcggc
     3541 gtcatgacca ccccattgaa catgccacca tgggaaaggc tgctggggtc actggcaggc
     3601 gcagcatagg cgaccctggg gaggatcgga tgccttggaa acagtatctg caggaggaag
     3661 ttgcctacca gatcgtcgcg ttcaaagcca gcgcccgacg ccagatagcg catgaggccg
     3721 gtcatggtga ccagaatcgc cagacatgtg gttgcggcac agcgcgtgat gccgctccaa
     3781 cgccgctggt ttgcagcctt gccgcggtaa atccaccaga ccaggattcc ggcggttgcg
     3841 ccggtaaagc cggctgtttc cgccttggct cccatggtcc atgccagcgc cgctccgtga
     3901 aagcaggctg cggcggcaaa gggccacaca gagcggcgag ggtggcggag ctggccgaac
     3961 atgtcgcgtt gggccacgga tctggatggt tgcttttcgg attggtaccc ggctcccagc
     4021 cgtgccacgc cggtggcaag catgagtgcc gggaggaaca tgaacgtgtt gttttcaccg
     4081 aagaacagga tcaggggcgg catccagacg gcaaccagag atgcctgcca cactgcgggc
     4141 gagaattccg ggcgtagatg ctccggctgg aagcggctgg ccagccagat agtaaaagcg
     4201 ctcgcggcca ggacgaacag aatagtggcg caggtccaga ccagaatccc ggccagtgac
     4261 cggaagcgat gcagctcaag cggcgcccag atggagagtc cggcggcaac cgtgactccg
     4321 ttcaatgcgg gcagccacgg cgaagacacg ccctgctgcc ccactgatcg ccagttgacg
     4381 gtcacgccgt ttcaaccttt ctttgtctga tcgcagctta taacatttct cgcacgtttt
     4441 tagagtgcag agaataacga caccagcata cgtttgatag ttcctcgaat tcggtgggcc
     4501 aggcgtattc aatacaaagt ctgccaaaac tatgttggtg caaatgcacc agcctcatgg
     4561 ctgaaaaaaa ccgtaccgca gctcaaagtt cggaactctg tcgcccaaat accgcccttt
     4621 cactgcaaag ggatggcccc aggagtgcat aagccttatt tcgttctcgt tgtgggaagg
     4681 agcactggat ggtccgtaga ctggcttttc tcctgcttgg ttcaccacta gtggtcagcg
     4741 ctgcgtgcca gccaagccag gctgcagccg ccgcacccgc caacagtcct ggagtgcagc
     4801 tcccggcgcc ggctccctct ctgaaagtta cgacgcgcat ggtggttgtg gatgtgatcg
     4861 cgacagaccg taaaggcctt c
//
LOCUS       DASQYP010000341         4296 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_37518, whole genome shotgun sequence.
ACCESSION   DASQYP010000341 DASQYP010000000
VERSION     DASQYP010000341.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 4296)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4296)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4296
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_37518"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..299
                     /locus_tag="VE783_11095"
     CDS             <1..299
                     /locus_tag="VE783_11095"
                     /inference="COORDINATES: protein motif:HMM:NF028211.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="glycerol-3-phosphate dehydrogenase C-terminal
                     domain-containing protein"
                     /protein_id="HYX53987.1"
                     /translation="LREPICPHTCHVVAEAVEAVAHESAITLGDILLRRVPVALGACW
                     SDDCSRAAAEKIGAALGWDGARMGQELDGFEEERQRFLHPATDPKLPLTVISAQ"
     gene            complement(311..1432)
                     /gene="mnmA"
                     /locus_tag="VE783_11100"
     CDS             complement(311..1432)
                     /gene="mnmA"
                     /locus_tag="VE783_11100"
                     /EC_number="2.8.1.13"
                     /inference="COORDINATES: protein motif:HMM:TIGR00420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_function: GO:0016783 - sulfurtransferase activity
                     [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 2-thiouridine(34) synthase MnmA"
                     /protein_id="HYX53988.1"
                     /translation="MATETIAVAMSGGVDSSTVAAMLRAKGHPVVGLTMQLWNQRRLA
                     GREGMPEQVQGRCCSIDDVYDARAVAQDLGIPYYVVNQEDRFEHDVVKPFVKEYLSGR
                     TPIPCSLCNNHLKFDQLLVTARQIGADLLATGHYARCEFSPERNRWLLRRAADEAKDQ
                     TYFLFGLTQDQLSRTRFPLGEMTKPQVRELARQHGVAIAEKPDSQEICFVPGGDYKRF
                     IDAYLAEQGEALPDTSGELVTADGQVLGRHEGIHNFTVGQRKGLGVATGSPLYVININ
                     GAKGQVTVGNNDDLLSHHLVARDLNWISILELTEPLRVQAKIRHRHQPAAATVSPAEN
                     GEVLVTFDEAQRAITPGQAVVFYQDDVVIGGGWIAQSHR"
     gene            complement(1548..2342)
                     /gene="nuoB"
                     /locus_tag="VE783_11105"
     CDS             complement(1548..2342)
                     /gene="nuoB"
                     /locus_tag="VE783_11105"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: protein motif:HMM:NF005012.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA];
                     GO_function: GO:0048038 - quinone binding [Evidence IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoB"
                     /protein_id="HYX53989.1"
                     /translation="MIFDVIQRSLQAPHRLIPVEELLGHAAGSRLPEFDPAHLTREIA
                     RAVSDVCPTAALKIVEVNGRQLLRMDYGECIGCGRCLEAGVTAVSVAKKLLRCGVRRH
                     ELVQHFDFERHSELVLEAPSPEVAKEEISRLFGRALNVRQLDAGSCNGCESEITALTN
                     PYYDFERFGIHFVASPKHADMLLVTGPVTRNMAVAVKQTYEAIPAPKLVVAVGACGCS
                     GGIFAVSHAVVGPVDKVIPVHGYIPGCPPTPSMLITGILQVLRKAK"
     gene            complement(2339..3826)
                     /locus_tag="VE783_11110"
     CDS             complement(2339..3826)
                     /locus_tag="VE783_11110"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: protein motif:HMM:NF012566.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit C"
                     /protein_id="HYX53990.1"
                     /translation="MSTASQQSQGVHRDVEVARLLQSAQPSPARLVCIFGSLDGLQRR
                     PVVRYIVDVPGEGYRVVTEPAEGPIPSLTSITAAAAWYERELHDQFGFEIVGHPDLRR
                     LLLHDNWPGNCHPMINTAEPLSWADEPYEFLKVEGEGVSEVAVGPVHAGVIEPGHFRF
                     SVIGDSVLFLELRHFYTHKGTEKLFQGTPLMNGPIIAESVSGDTCLAHAVAYCQAVEQ
                     AHAALVPRRAELIRLIGLELERMMAHIADVGALSGDVAFVIPAAYCSRIKEDLLQAGS
                     RVIGSRYWRGVAVPGGVTRDINPAAAEALHQAVTQAADEFAKIANIIIDRPSVQSRFE
                     TAGVLRRQVAADLGVVGIVARASDVDLDLRRDHPYGAYQGLKFDVPTLHYGDVLARAR
                     VRIAETAVSAQLILNALEQLQPGPIRTDFRTDVAFEGFSAVESPRGELLYWVRGENRR
                     LERCYIKSPSFQNWPALPHAVAGNVVADFPLINKSFNLSYSGCDR"
     gene            complement(3823..>4296)
                     /locus_tag="VE783_11115"
     CDS             complement(3823..>4296)
                     /locus_tag="VE783_11115"
                     /inference="COORDINATES: protein motif:HMM:NF012581.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="proton-conducting transporter membrane subunit"
                     /protein_id="HYX53991.1"
                     /translation="GALLHSFNHAAAKSLLFFVAGNVRENFGTLRLDKITGMARSMRW
                     TSIFLAAGVLAIIGMPPFSLFVSEFAILNAAFVQENHAMVTVVLLAIVVGFGALVFQL
                     QRMLGGEDASRKTPVIAKTEIMAMAICACVVLGMGVHLPTAFIGMIHRAMAVLSL"
BASE COUNT          917 a         1305 c         1236 g          838 t
ORIGIN      
        1 ggctacgcga gcccatctgc ccgcacacct gtcatgttgt ggctgaagcg gtagaagccg
       61 tcgcgcacga atcggcgatt acgctcggtg acattctcct gcgccgcgtg ccggttgccc
      121 tgggggcatg ctggtcagac gactgcagcc gcgctgcggc agagaagatc ggcgctgctt
      181 tggggtggga cggggctcga atgggccagg aacttgacgg atttgaggaa gaacggcagc
      241 ggtttctgca tcccgccaca gacccgaaac tgccgctcac cgtaatatcc gcgcagtaga
      301 gctgaacttg ctagcggtgc gactgggcga tccatccgcc accgatcact acgtcatcct
      361 gatagaacac aactgcctgc ccaggcgtga tggcgcgttg cgcctcatcg aaggtgacga
      421 gaacctcgcc attttcagcc ggactcacag ttgctgcagc gggctggtga cgatgccgaa
      481 tcttggcctg aacgcgaagc ggctcggtga gttccaggat ggagatccag ttcaggtcgc
      541 gcgcaaccag atgatgtgac agcaaatcat cattgttgcc aaccgtgacc tgtcccttcg
      601 cgccattaat gttgatgacg tacagtggag agccggtggc aactcccagt cccttgcgtt
      661 gccctaccgt gaagttgtga atgccctcat gacggcccag cacctggcca tccgcggtga
      721 ccagttcacc ggacgtatcc ggcaaggctt ctccctgctc agccagatag gcatcgataa
      781 agcgcttgta atctcccccg ggaacgaaac agatctcctg cgaatccggc ttctctgcga
      841 tcgcgactcc gtgctggcgc gccagttcgc ggacctgcgg cttggtcatc tcgccaagcg
      901 gaaagcgagt gcggctgagc tgatcctggg taaggccgaa gagaaagtaa gtctggtcct
      961 tggcttcgtc agcggcgcgc cgcaacagcc agcgattgcg ctcgggagaa aactcgcaac
     1021 gcgcgtagtg gcccgtggcg agcaagtccg cgccaatctg ccgcgcggtg accagcaact
     1081 ggtcaaactt taaatggttg ttgcacaggc tgcacggaat gggcgtccgg ccagaaagat
     1141 actccttcac gaacggcttc accacgtcat gctcgaaacg gtcttcctga ttcaccacgt
     1201 agtagggaat gccaaggtcc tgcgcgacgg cgcgcgcgtc gtaaacgtca tcgatggagc
     1261 agcaccgccc ctgcacctgc tccggcatgc cctcgcgacc ggcgagcctg cgctggttcc
     1321 acaactgcat cgtcaggccg actacgggat gacctttcgc gcgcagcatg gctgcgacgg
     1381 tggatgaatc cacaccgcct gacatggcta cggcaatggt ctctgttgcc atggatgtcg
     1441 caaaggggct cgttcaatta taaatgagca atagttggtg gaagattctg ctctgttatg
     1501 gaagaccttg tttcgacgag cgcaatcctg gctcagtccg ctacgagtta ttttgccttc
     1561 cgcagaacct gcaggattcc tgtaatcagc atgctcggag taggagggca tccgggaata
     1621 taaccgtgaa caggaatgac tttatccacg gggccaacca cggcatggct caccgcgaag
     1681 attccgccgc tgcatccgca ggcgcccaca gccaccacca gtttgggtgc agggatcgct
     1741 tcataggtct gtttcactgc aactgccata ttgcgcgtaa ccggtccggt gaccagaagc
     1801 atgtcggcat gcttcggcga ggccacaaag tgtatgccga agcgctcgaa atcgtagtag
     1861 ggatttgtca atgcggtgat ctcagactcg cagccgttgc aggagccggc atcaagctgg
     1921 cggacgttca aggcccgccc gaatagacgg ctgatttctt ctttcgcgac ttccggggag
     1981 ggcgcctcaa gaacgagctc ggagtgtctc tcaaaatcga agtgttgcac cagttcgtgc
     2041 cgtcgaacgc cgcatcgcag taatttcttc gccacagaaa cagcggttac accggcttcc
     2101 aggcaccgac cgcatccgat gcattcccca tagtccatcc gcaatagctg ccggccgttc
     2161 acttccacga tcttgagagc cgcagtcgga cagacatcgc tgacggcgcg cgctatttcc
     2221 ctggtcaggt gcgcggggtc gaattcaggc aagcggcttc cggcagcgtg gcccagcaat
     2281 tcctccaccg ggataagccg atgcggagcc tgtagactgc gctgaatcac atcaaagatc
     2341 atcggtcaca tcccgagtac gacaaattga agctcttgtt gatcaacgga aagtccgcaa
     2401 ccacatttcc cgcgactgca tgcggcagtg caggccagtt ctggaatgag ggcgacttga
     2461 tgtagcagcg ttccagccgg cggttctcac ctcgtaccca atacaacagc tcacctcgcg
     2521 gcgactccac tgcggaaaag ccttcaaagg caacatcagt tcggaaatct gttcttattg
     2581 ggccgggctg cagttgttcc agtgcattca atatcagctg cgccgatacg gcagtttccg
     2641 caatccgcac ccgcgcccgt gccagcacgt cgccgtagtg aagggtgggg acgtcaaact
     2701 taagtccctg gtaggcccca taagggtgat cgcgccgcaa atccaaatcc acgtcgctgg
     2761 ctctggccac aatgccgaca accccaagat ccgccgcgac ctggcgtctc aatactcccg
     2821 cggtttcaaa ccggctctgc accgaaggcc ggtcaatgat gatgtttgct atttttgcga
     2881 attcgtcagc cgcctgagtg accgcctggt gaagcgcttc ggccgcggcc ggattgatgt
     2941 cgcgggttac gccgccggga actgcaacgc cacgccagta gcgcgagccg attacgcgcg
     3001 agccggcctg gagcaggtct tccttgatgc ggctgcagta tgcagctgga ataacgaagg
     3061 ctacgtctcc ggagagcgcc cccacgtcag caatgtgggc catcatccgc tcgagttcca
     3121 gcccgatcag gcggatgagt tccgcgcgcc gcggcaccag ggctgcgtgc gcctgttcca
     3181 ccgcctggca ataagccact gcatgagcaa gacaggtatc gccggaaacc gattcggcaa
     3241 tgatcggacc gttcatcaat ggtgtaccct gaaacaattt ttctgtcccc ttgtgggtgt
     3301 agaagtgccg cagctcaaga aacagcacac tgtcgccaat cacgctgaag cggaagtggc
     3361 ctggttcgat cacgcccgca tggacaggcc ccacagcaac ttcggaaaca ccttcgccct
     3421 caaccttgag gaactcatat ggctcatcgg cccagctcag cggctcagcg gtattaatca
     3481 tgggatggca gttgcccggc caattgtcgt ggagcagcag ccggcgcagg tcaggatggc
     3541 caacgatctc aaatccgaac tgatcgtgca gctcgcgctc ataccatgct gcggcggctg
     3601 tgatgctggt gagtgacggt atgggaccct cggctggctc ggtcaccaca cgatagcctt
     3661 cgccaggaac atccacgatg taccgcacca caggtcttcg ttgcaggccg tccagggagc
     3721 caaagatgca gaccagccgt gccggactgg gctgcgcgct ttgcagaagg cgtgccactt
     3781 caacgtcgcg gtggactccc tggctttgtt gtgaagcggt gctcataaac tgaggaccgc
     3841 catggcgcga tgaatcatgc cgataaatgc cgtgggcaag tgcactccca ttcccaaaac
     3901 cacgcaggcg cagatcgcca tggccatgat ttccgttttg gcaatgaccg gggttttgcg
     3961 cgacgcatcc tcgccgccaa gcatgcgctg caactggaat accagcgctc cgaaccctac
     4021 gacgatcgca agcagaacga cggtcaccat agcgtggttc tcctgcacaa atgccgcatt
     4081 caaaatcgca aattcactaa cgaagagcga aaagggtggc atgccgatga tcgccagcac
     4141 gccggcagcg agaaaaatgc tggtccatcg catgctgcgg gccatccccg tgatcttatc
     4201 caggcgcagc gtgccaaagt tctcgcgcac attcccggca acgaagaaga gcaaagactt
     4261 tgccgccgcg tggttgaaac tatgaagcag cgcgcc
//
LOCUS       DASQYP010000342         4906 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_311624, whole genome shotgun sequence.
ACCESSION   DASQYP010000342 DASQYP010000000
VERSION     DASQYP010000342.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 4906)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4906)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4906
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_311624"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            335..610
                     /locus_tag="VE783_11120"
     CDS             335..610
                     /locus_tag="VE783_11120"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53992.1"
                     /translation="MEERDYYDEKESKKPHTLTCPHCRTANEYELAWLVRTKKRQLPP
                     RADERDRAKFAKAQSYMVRRDDMVACKNVRCRKRFEVAGVQSVAFLE"
     gene            792..1562
                     /locus_tag="VE783_11125"
     CDS             792..1562
                     /locus_tag="VE783_11125"
                     /inference="COORDINATES: protein motif:HMM:NF013200.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="electron transfer flavoprotein subunit beta/FixA
                     family protein"
                     /protein_id="HYX53993.1"
                     /translation="MKILVCMKQVPQKDAPLKLNENGTWIRDDVSYEVNEPDAYALEE
                     ALRQKEKHGGEVVVITAGPARAQSVVREGLAKGADRAIHLEDNAFVTMDALNIAKAFV
                     AAIKEEQFDLIFTGLQSDDFGFAQTGVIMAELLGWPHATIIMEIQKSDGGIKVKRELE
                     AGFFQHVSMPIPAVLTIQSGINKLRYATLLGIKQAKNKPLRKVTLDEVKAGLGDNLQK
                     IEKLYIPQKTKKTEMLDGAPGEVAKKLVDKLRNDVRVI"
     gene            1585..1830
                     /locus_tag="VE783_11130"
     CDS             1585..1830
                     /locus_tag="VE783_11130"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53994.1"
                     /translation="MERMEYDPEGGDYLPVSEHETGSTLMVAGVIMLLAGMGWLLYVG
                     WDIRAGNKFMQWIFGLDIFLALFLMIWGFMKKRRQTA"
     gene            1834..2820
                     /locus_tag="VE783_11135"
     CDS             1834..2820
                     /locus_tag="VE783_11135"
                     /inference="COORDINATES: protein motif:HMM:NF013200.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="electron transfer flavoprotein subunit
                     alpha/FixB family protein"
                     /protein_id="HYX53995.1"
                     /translation="MADTILVVAEQREGKLNRVSMETIAAAQAISAETGWSVEAAVFG
                     NGISGIAQEIAGRKLAKVYDIESPNLAKYEPDGTVAALKSFIQQKQPRLVLMPHTYQV
                     RDFAPQLTTSLGRTLISDVIAFRKDGDRLVFTRQMFQGKFAADVSFNCDPPHFVTFQA
                     GAFRGDKAEAGASAAAVETVNAQIGGAIRNQPEDPFKEAKQAVDLTQAEIIVSVGRGI
                     KEQKNIELAKALAEALGGEIAASRPICDAGWLPMDRQIGSSGQTVAPKLYLAVGISGA
                     IQHIVGMKGSRSIIAINKDAEAPIFEIADFGVVGNLFDILPALTEEVKKAKA"
     gene            2949..4664
                     /locus_tag="VE783_11140"
     CDS             2949..4664
                     /locus_tag="VE783_11140"
                     /EC_number="1.5.5.1"
                     /inference="COORDINATES: protein motif:HMM:NF017038.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004174 -
                     electron-transferring-flavoprotein dehydrogenase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0022900 - electron transport chain
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="electron transfer flavoprotein-ubiquinone
                     oxidoreductase"
                     /protein_id="HYX53996.1"
                     /translation="MIYFRKPIEGIERPQMEADVVIVGGGPSGMACALRLSQLIDVHN
                     RRHPDAQLSKENIYVLEKAREVGQHCLSGAILDPRSMDELLPGWRQEAPLDALVEHES
                     FYYLTEKKSYRAPLMPPPMQDHGNYVISINKFVKWLGEKVEQAGITVFTGFAGSQLSY
                     EGERVTGVITDDKGVDKTGQQKSNFEPGYELKSKVTVLAEGTRGSLTKQLINKFDLCK
                     DRNPQIYGVGVKELWELPSGRVRKGEVILTLGWPLTTKEYGGSWIYGSKDNLVSLGYV
                     TSLDYMDPRIDPQKVLQEWKKHPLITDLLKGGKMIRYGAKSVPYGGWYSLPPLAGDGW
                     MIVGDSAGFLNSQRLKGIHLAIKSGMLAAETAYSALAGGKFGKDKLQEYKLAVDASWI
                     RDELWEVRNFHQGFENGLVPGLFHAAIQQLTGGRGMRDFYPAHKGHTRMKHLDQLPAD
                     GGDRAQMLNDAKGDGKLTFDKLTDLYHSGTRHEEDQPAHLVIHDTNICNSRCVVEFGS
                     PCQHFCPANVYEMVDAAGAPHGKEIHLNPSNCVHCKTCDIMDPYEIITWVPPEGGGGP
                     NYDGM"
BASE COUNT         1147 a         1354 c         1432 g          973 t
ORIGIN      
        1 ggaggtaatg gcgcagccca tggcccaacg gcgagcgaac gcctcattgt cgaagccggc
       61 gtaaacctcg tcatagtatt tccggttata agcagtcgcc ataatcaggg agtttgcagt
      121 cttgcatcag cattcttgcg gccatacccc agcaagtcaa tacgctgaat acgtggggga
      181 ggattaagaa aaatggttca gcttattgat aagaaaaggc ttaagaagct cagtttacgc
      241 ccgaagcgaa tcagctaata ctccccagcc gccaaggagc gaatattgcg gcggagccag
      301 gaggcaatgt ctctgtgtgg ttaaatagac tcaaatggaa gagcgcgatt attacgacga
      361 gaaggaatcc aaaaaaccgc acacccttac ctgcccgcac tgccgcaccg cgaatgagta
      421 cgaactcgca tggctggtgc gaaccaagaa acggcaattg ccgccccggg ctgacgaacg
      481 cgatcgggca aaattcgcga aggcacagtc ttatatggtt cgtcgtgacg atatggtcgc
      541 gtgcaagaat gtccgatgcc gcaagcgctt tgaagttgcg ggcgtgcagt cggtcgcgtt
      601 tctggaatag cgtgcgacgc atttcacctg aaggtcgcag gagcaagcct gcgctccagt
      661 gccttgctgg ccggcgcttg ctgccataac acccttacct catttatact tgcaggtttc
      721 cctggttgta ccgggcctga cattctggcc gttcccaaca tctaagttcg gttacaggaa
      781 aaacagcgat tatgaagatt ctggtctgca tgaagcaggt cccgcagaag gacgctcctc
      841 tcaaactcaa cgaaaacggc acctggatac gcgacgacgt ctcctacgaa gtcaacgagc
      901 ccgacgccta cgcgctggaa gaggcgttgc ggcagaaaga gaagcatggc ggagaggtgg
      961 ttgtgatcac cgccggtccg gcacgcgctc aaagcgtggt gcgtgaaggg ctggccaaag
     1021 gcgctgatcg ggcaattcat ctggaggaca acgcttttgt caccatggac gcgctgaaca
     1081 tcgccaaggc gttcgttgcg gccatcaaag aagaacagtt tgacctgatc ttcaccggcc
     1141 tgcagtcaga cgactttggc ttcgcccaga ccggcgtaat catggcggag ctgctgggct
     1201 ggccgcacgc caccatcatc atggaaattc agaagagcga tggcggcatc aaggtgaagc
     1261 gtgaactgga ggccggtttc ttccagcatg tgagcatgcc gatacccgca gtcctcacga
     1321 ttcaatccgg cattaacaag ctgcgctatg caacgcttct cggcatcaaa caggctaaga
     1381 acaagccgct gcgcaaagtc acgctggatg aagtaaaagc cgggctgggc gacaacctgc
     1441 aaaagattga aaagctgtat attccgcaga agaccaagaa aacggagatg cttgacggcg
     1501 cgccgggcga ggtcgccaaa aagctggtgg acaaattgcg caacgacgtt cgcgtgatat
     1561 gacaagtttt caaggagtag caccatggaa agaatggaat acgatcctga aggcggagat
     1621 tatttaccag tatctgaaca cgaaaccggt tctacgctga tggttgcggg cgtgatcatg
     1681 ttgctggccg gcatgggatg gctgctctac gtgggctggg acatccgggc gggcaacaag
     1741 ttcatgcagt ggatttttgg gctggacata ttccttgcct tgttcctgat gatctgggga
     1801 ttcatgaaga agaggcggca gacggcttaa atcatggcag acacaattct ggttgttgca
     1861 gagcagcgcg aaggcaagct aaatcgcgtt tccatggaga cgattgcggc ggcgcaggca
     1921 atttccgctg agaccggctg gagcgtggaa gcggcggtat tcggcaatgg catctccggc
     1981 atcgctcagg agatcgccgg ccgcaaactc gcgaaggttt acgacattga atcgcccaat
     2041 ctggcgaagt acgagccgga tggcaccgtc gcggcgctca agagctttat ccagcagaag
     2101 cagccacgcc tggtgctgat gccgcatacc taccaggtgc gcgactttgc tccgcagctc
     2161 accacatctc ttggccgcac cctgatcagt gacgtgattg ccttccgaaa agacggtgac
     2221 cggctcgtgt ttacccgcca gatgtttcag ggaaaatttg ctgctgacgt ttctttcaat
     2281 tgcgatccgc cgcatttcgt caccttccag gccggcgcgt tccgaggaga caaggctgag
     2341 gccggcgcct ccgccgctgc ggttgaaacc gtgaacgcgc agatcggtgg cgcaattcgc
     2401 aaccagccgg aagatccatt caaggaagcc aagcaggcgg tggacctcac ccaggctgaa
     2461 atcatcgtgt cggttggtcg cggtatcaag gaacaaaaaa atattgagct cgccaaagcc
     2521 ctggcggaag cgctcggcgg cgagattgct gcatcgcgtc ccatctgcga cgccggatgg
     2581 ctgcccatgg accgccagat tggcagctcc ggccagacgg ttgcacccaa gctttatctt
     2641 gcagttggga tcagcggcgc gattcagcac atcgtcggca tgaagggctc gcgttcgatt
     2701 atcgccatca ataaagacgc ggaagcgcct atcttcgaaa ttgccgattt cggcgtggtc
     2761 gggaacctgt tcgatattct cccggccctg actgaagaag tgaagaaggc taaagcctga
     2821 agattgccaa aattgccagg attgccaaga ttgaaaattg agaggcggtg tgctcgtcga
     2881 tgcgtactgc ccactgtttg gctactgcta attgccattt gctgattgct tcagccgagt
     2941 gctaatgaat gatctacttt cgtaaaccca tagaaggcat cgagcgtccg cagatggaag
     3001 ccgatgttgt catcgttggc ggcgggccgt ccggcatggc ctgcgcactg cgtctctcac
     3061 agcttattga cgttcataat cgccgccatc cggacgcgca actgagcaaa gaaaacattt
     3121 acgtgcttga gaaggcccgc gaggtcggcc agcactgcct ttccggcgcc atccttgatc
     3181 cgcgatccat ggacgaactc cttcccggct ggcggcagga agccccgctt gacgcgctgg
     3241 tggagcacga gagcttctat tacctgactg agaagaagtc ttatcgcgcg ccgctcatgc
     3301 cgccgcccat gcaggaccac ggcaactacg tgatatcgat taacaagttc gtaaagtggc
     3361 tgggtgaaaa agttgagcag gccggaatca ccgtgtttac cggcttcgcc ggatcgcagc
     3421 tcagctatga aggcgagcgc gtaacgggcg tgatcacgga tgacaagggt gtagacaaaa
     3481 ccgggcagca gaaatcgaac ttcgagcccg gatatgagct gaagtcgaaa gtcaccgtcc
     3541 tggcggaagg aacgcgtggt tcgctgacca agcagctcat caacaagttc gatctctgca
     3601 aagaccgcaa cccgcagatc tacggcgtgg gcgtgaaaga gctctgggaa ctgccctccg
     3661 ggcgcgtccg caaaggcgag gtgattctca cgctcggatg gccgcttacg acgaaggaat
     3721 acggcggctc ctggatttac ggttcgaaag acaatctggt ctcgcttggt tatgtcacca
     3781 gcctggatta catggatccg cgcatcgatc cgcagaaggt gctgcaggag tggaagaagc
     3841 atccgctgat taccgatctg ctcaagggcg gcaaaatgat ccgctatggc gccaagtctg
     3901 ttccttatgg tggctggtac tcgctgccgc cactcgcggg agatggctgg atgatcgtcg
     3961 gcgactctgc cggcttcctc aactcccagc ggctcaaggg cattcatcta gccattaaga
     4021 gcggcatgct tgccgccgaa accgcgtatt ctgcgctggc gggaggcaag ttcggcaaag
     4081 acaagctaca ggaatacaaa ctggcggtgg acgccagctg gatccgcgat gaactctggg
     4141 aggtccgcaa cttccatcag ggctttgaga acggccttgt gcccggcctg ttccacgccg
     4201 ccatccagca actcacgggc ggacgcggta tgcgcgactt ctatcctgcg cacaaaggac
     4261 acacgcggat gaagcacctg gaccagctac ccgctgacgg cggcgaccgc gcgcagatgc
     4321 tgaatgacgc gaaaggtgac ggcaagctga ccttcgacaa gctgaccgac ctttaccact
     4381 ccggcacgcg gcacgaggaa gaccagcccg cgcacctcgt catccacgac accaacatct
     4441 gcaactcacg atgcgtggtg gaatttggca gcccctgcca gcatttctgt cccgcgaacg
     4501 tttacgagat ggtggacgcc gccggcgcac cgcacgggaa agagattcat ctgaacccct
     4561 ccaactgcgt gcactgcaag acctgcgaca tcatggaccc gtacgagatc atcacctggg
     4621 tgccaccgga gggtggcggc gggcccaact atgacggaat gtgattcggg gagcatgagc
     4681 caggcagcgt tctttttggc gttttctgcc gaggcgttct ggtcacagcg cggctgcggc
     4741 aaaaggaaat gctctgaaaa gctctagttg cggtgctccg cagccgctga atctcttcgt
     4801 ctgaatagcc gatctcgcgc agcaccatct cgtacggtct ccgaaaaacg cagcatgacg
     4861 acacgtctca ggcggtttag cgtcgaacga ttttcaagca aacctt
//
LOCUS       DASQYP010000343         6472 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_15182, whole genome shotgun sequence.
ACCESSION   DASQYP010000343 DASQYP010000000
VERSION     DASQYP010000343.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 6472)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6472)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6472
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_15182"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..812
                     /locus_tag="VE783_11145"
     CDS             <1..812
                     /locus_tag="VE783_11145"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR00027.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HYX53997.1"
                     /translation="EHKLKASARLIAALRARATADPTPIISDPYARQAAGEHGDLLAD
                     RFLASSPQLGPMIAARTRHIDDLIGGHGGLKQIVLLGAGFDFRPYRLGVGPDVTVFEV
                     DFPEMLIQRERTIAELGLKGDFTRYSVACDMELDDLTKSLLDYGFNPSLPTVFIKEGT
                     SMYLDAGTNARTLDAIAGLMKNPQSRMWVDYVQNDLFEARHSEPTVNAFLDSMERMGE
                     PFIFGVRSSQEWLQQFGLSVEEDIDTGKYFPELTAKPVYPLYRFAVARAAS"
     gene            complement(829..1464)
                     /locus_tag="VE783_11150"
     CDS             complement(829..1464)
                     /locus_tag="VE783_11150"
                     /inference="COORDINATES: protein motif:HMM:NF018446.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005267 - potassium channel activity
                     [Evidence IEA];
                     GO_function: GO:0015252 - proton channel activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TMEM175 family protein"
                     /protein_id="HYX53998.1"
                     /translation="MALISLHSRIAGHSLERLAALSDGIFAVAMTLLVLDLRVPMAEA
                     IHSQRELALALFAMWPKILMYAVSFLSLGLAWAAQQTEMSWVAKSDRSFAWAQILFLF
                     CVTLLPFTTQVVSQFHQYRLAFLLYWFNISILGATLYRSWMHATSAELTKPDMPPEIP
                     EEVRKRFFTAQGLYTFGAVLCLISAYVSLAFILAVQLTYALEPKITHREAH"
     gene            complement(1540..2316)
                     /locus_tag="VE783_11155"
     CDS             complement(1540..2316)
                     /locus_tag="VE783_11155"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX53999.1"
                     /translation="MKRTKVDLLIFMIVLFACQMAFGYGHANRYGGSTSHSWGSTSHT
                     NAWGGGTSHVAGEGTSHSNVYGGGTAHAYGGGTAHTNMYGGTTAGAAGYGAAHTGPYG
                     GSAYASAYHPAYAGGYAAGGYYGYHPPAAVPYYGAACYNCGHGWAAAATGAAVGAVTT
                     AAVMSSQSSAAAATGYSQGYQAATAQSNANASHAYSQGYQAGATTAASLSMGQIIMAL
                     PSGCISPAVPSGGTYYLCANTWLRPYYGASGLYYKVVTAP"
     gene            complement(2335..3126)
                     /locus_tag="VE783_11160"
     CDS             complement(2335..3126)
                     /locus_tag="VE783_11160"
                     /inference="COORDINATES: protein motif:HMM:NF021391.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2092 domain-containing protein"
                     /protein_id="HYX54000.1"
                     /translation="MPSTQANTLQPPALEPRAIEVLKAASSKLASARNVSFTAVEVFE
                     TSSRHGHPLALTTRYEVAMQRPDKLRVLVAGDGPASEFYYNGKLMMALAPSEDLIAMT
                     EAPPTIDATLEAAYKQAAIYFPFTDILVTDPYKDMQPGLKLAYYVGQSKVVGGTTTDI
                     VAYVDQGVFLQMWVGAEDKLPRMIRAVYLDDPAQLRHQLEISNWQLDTELPEETFRTA
                     RAGTAKHIAFAHPHPETSSGTKAPVKPAAKPKSASAKTNSVAQAR"
     gene            complement(3284..3574)
                     /locus_tag="VE783_11165"
     CDS             complement(3284..3574)
                     /locus_tag="VE783_11165"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX54001.1"
                     /translation="MSKRILLPATALFLFCAAAGSTQYPVLDAIADRVIAKYQNSSCE
                     QLWEKKMSKPPMSQQEQEMIQFLKNSPQARAAFINRIAGPIANKMFDCDMIP"
     gene            complement(3744..6227)
                     /locus_tag="VE783_11170"
     CDS             complement(3744..6227)
                     /locus_tag="VE783_11170"
                     /EC_number="3.1.6.-"
                     /inference="COORDINATES: protein motif:HMM:NF013080.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008484 - sulfuric ester hydrolase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="arylsulfatase"
                     /protein_id="HYX54002.1"
                     /translation="MTSAKTLQVFGGALLVATVPAIAQQTTGTPGAPNATTTIDGRYL
                     PAPPTQFGGEISLDAKTSRPYWDPRVVPPKGAPNVLLIMTDDAGYGVSSTFGGVIPTP
                     TMDQLARVGLRFTQFHSTALSSPTRAAIITGRNHHSVGFGVVAEQATGFPGYDSVIGP
                     DNATIGAILKNNGYATSWFGKNHNTPDYQYSLAGPFDQWPIGMGFDYFYGFMGGETDQ
                     YTPYLFRNTTPIFPWREQSNYNLVTGMADDAIRYLREVNASAPDKPFFMYYVPGATHA
                     PHQPTKEWIQKISALHLFDKGWNAVREQIFENQKKLGVIPPNTKLSDWPDGQPEYNGV
                     KLPRWETLSPDEKKLFIKQADVYAAFVAYTDYEIGRVIKEVAEQGKLENTLIVYITGD
                     NGTSSEGSMTGTPFDLAPLQGINIPVQPQLKFLEAWGSPQTQPHMAVPWAWAFDSPFK
                     WMKQVASHFGGTRQGAVIAWPGHINDPGGIRTQFHHVIDIVPTILEATGIEAPVMVNG
                     IAQKPIEGVSMAYTFDKANANATSRHDTQYFEIFGNRAIYHNGWIATTTPPAPPWLMG
                     KAEMPEVMNGYKWELYNITDDYSESNDLAASQPDKLREMQELFLMQATKYNVFPLDNS
                     ILARVIAPRPSATAGRTVFTYSSVVTGIPGANAPNILNKSYTISAEVEVPAGGGEGMI
                     VTNGGRFGGYGLYVLKGKPVFLYNLLGLERFRWEGTAPLAAGKHTLVFDFKYDGPGPG
                     KGGTGTLSIDGKEVANKTIPHTVPFVMSLGETLDIGSDTRSGVDDGDYKLPFQFTGKI
                     NKVTFNLKPEQLSMDDQNTKHEVESNVNY"
BASE COUNT         1265 a         1770 c         2003 g         1434 t
ORIGIN      
        1 tcgaacacaa actgaaagct tccgcgcggc tgattgcggc gttacgggcg cgggctaccg
       61 ccgatcccac tcccatcatc agcgatcctt acgcccggca ggctgccggc gagcacggcg
      121 atttgctggc tgaccggttc ctggcttcct cgccacaact gggtccgatg atcgcggcgc
      181 gcacccggca cattgacgac ctgattggcg gtcacggcgg gctcaagcag attgtcctgc
      241 tgggcgctgg ttttgatttc cgtccttacc ggcttggagt tggcccggat gtgaccgtgt
      301 ttgaagttga ttttccggag atgctgatcc agcgggaacg gacgatcgcg gagctcggct
      361 tgaagggtga ctttacgcgc tattctgtgg cgtgcgacat ggagctggat gatctgacga
      421 aaagcctgct cgattatggc tttaatcctt ccctgccgac cgtgtttatc aaggaaggca
      481 ccagcatgta cctggatgcg ggcaccaacg ccagaacgct ggacgcgatt gccggcctga
      541 tgaagaatcc gcagagccgg atgtgggtgg attacgtgca gaacgatctt tttgaagcac
      601 gccactccga gccgacggtg aatgcgttcc tggattcaat ggagagaatg ggcgagccct
      661 tcattttcgg agttcggagt tcgcaggaat ggctgcagca gtttgggctt tcggtggaag
      721 aggacatcga cacgggaaag tacttcccgg agctgacggc gaagccggtg tacccgttgt
      781 accggtttgc ggtggcacgg gcggcttcgt aaacatggcg gctgttgttt aatgcgcctc
      841 gcgatgggtg atcttaggct cgagggcata cgtgagctgc acggcgagga tgaaggcaag
      901 actcacgtag gcgctgatca ggcagagcac agcgccgaag gtatagagcc cctgcgccgt
      961 aaaaaatcgc tttcgtacct cttcgggaat ctcaggaggc atatccggtt tcgtgagctc
     1021 tgccgaggta gcgtgcatcc agctgcgata gagggttgcg cccagaatgg agatattgaa
     1081 ccagtacaac agaaatgcca gcctgtactg gtggaactga gagacaacct gcgtggtaaa
     1141 ggggagcaaa gtcacgcaaa acagaaagag aatctgggcc caggcgaagc ttctgtctga
     1201 tttggctacc cagctcatct ccgtctgctg agcagcccaa gccaggccca ggctgaggaa
     1261 gcttactgcg tacatgagaa tcttgggcca catggcgaag agcgcaagag ccagttcgcg
     1321 ctggctgtga atggcctctg ccatggggac ccgaagatcg agaaccagca gggtcatggc
     1381 aacggcaaag attccgtcgc tcagtgccgc caggcgctca aggctatggc cggcgattcg
     1441 ggagtgtagc gatatcagtg ccatctcatg atcctgacgg ttcaaccgca aataagtgcg
     1501 tccggggcag cagtaagagc tgccccgcag gttctgcctc tatggcgcgg tcacaacctt
     1561 gtaataaagc ccgctcgcgc cgtagtaagg tctcaaccag gtattggcgc agaggtaata
     1621 agttccgccg cttggcacag ccgggctgat gcagccgctg ggcagcgcca taataatctg
     1681 gcccatgctc aagctggccg ctgtggtggc gcctgcctga tatccctgac tgtaagcgtg
     1741 cgaggcgttc gcgttgctct gtgcggtggc cgcctgatat ccctgcgaat agccggttgc
     1801 tgcagcagcg ctactttgtg acgacataac ggccgctgtg gtcacggccc ccaccgctgc
     1861 gccagtggcc gctgctgccc agccatggcc gcagttgtag catgcagctc catagtacgg
     1921 aacggctgcc ggagggtgat aaccgtaata gcctcctgca gcgtaaccgc ccgcgtacgc
     1981 aggatgataa gcagatgcgt acgctgaccc gccgtatgga ccagtgtggg ccgcgccgta
     2041 accggcagcg cccgcagtgg tgcctccgta catgttggtg tgagcggtac ctccgccata
     2101 cgcgtgggca gtgcccccgc cgtaaacgtt ggaatgggaa gtgccctcac ccgcgacatg
     2161 agatgttccg ccaccccacg cgttcgtgtg gcttgtggat ccccaactgt gcgaagtgct
     2221 acctccatag cgatttgcgt gcccgtagcc aaatgccatc tggcaggcga agagcactat
     2281 catgaaaatc agcagatcga ctttggtcct tttcatcaca acctcctcgc gtcttcagcg
     2341 cgcctgggct acggaattag tcttggccga ggcggatttt ggtttggctg cgggcttgac
     2401 cggcgccttt gttccggagc tggtttcagg atgcggatgc gcaaacgcga tgtgtttcgc
     2461 tgtgccggcg cgagcggttc tgaaagtctc ttccggaagc tcggtatcga gctgccaatt
     2521 ggagatctcc agttgatgcc gcaactgcgc cggatcgtcg aggtagactg cgcggatcat
     2581 gcgcggcagc ttgtcttccg cgcccaccca catttgcagg aaaaccccct ggtcaacgta
     2641 ggcgacaata tctgtagttg tgccgcctac gaccttcgat tgcccgacgt agtaggcgag
     2701 cttgagcccg ggttgcatat ctttatacgg atcggttacc agaatgtcag tgaaggggaa
     2761 ataaattgcc gcctgcttgt atgccgcttc cagggtggca tcaatggttg gcggagcttc
     2821 cgtcatggca atcaggtcct cggagggagc cagggccatc atcagtttgc cgttgtagta
     2881 aaactctgag gctggcccgt caccggcaac cagcacccgc agcttgtctg gacgctgcat
     2941 ggcaacctca tatctggtgg tcagagcgag cgggtgtccg tgacggctgg aggtttcaaa
     3001 cacctccaca gccgtaaagc tcacgttgcg ggcgctggcc agctttgagc ttgccgcttt
     3061 aaggacctca atcgccctgg gctccagtgc aggcggctga agcgtgtttg cctgagtgga
     3121 cggcactttc ctggcatgag actgaacggg tttcttgtgt gacgccgtcc tggtttgggc
     3181 caagctgagg gccggcagtg ctaatcccag aagaaggacg cagctaagaa aatttcgtaa
     3241 attcattatc gacctcccca aaaacaggtg ttgcgcgaca ggcttacggg atcatgtcgc
     3301 aatcgaacat cttgttggcg atgggccccg cgatccggtt gatgaaggct gcccgggcct
     3361 ggggactgtt tttcaggaac tgaatcatct cctgctcctg ctgcgacatc ggtggcttgc
     3421 tcatcttttt ctcccacaac tgttcgcaac tggagttctg atatttcgcg ataactctat
     3481 ccgcgatggc gtcaagtacc gggtactgcg tgcttcccgc cgccgcacag aacaggaaca
     3541 atgccgtcgc cggcagcaat atgcgcttgc tcataacccg cctcctcgtt cagagagtct
     3601 gtatagccag aattgcttgc tcttctggag cggcgcccac cggcctcttg cgactgcagg
     3661 agccggtggg agccgccagg ggggaatctc ggcggagctg ggcgatttgg ggggctgtgt
     3721 cgcttcgacc ccgccggact cgactaatag ttcacattgc tctcgacctc gtgcttcgta
     3781 ttctgatcgt ccatgctcag ttgctcaggc ttgaggttga aggtgacctt gttgattttt
     3841 ccggtgaact ggaatggcag cttgtaatcg ccgtcatcca ccccgctgcg cgtgtctgaa
     3901 ccgatgtcga gcgtttcgcc cagactcatc acgaacggaa cggtgtgagg gatggtttta
     3961 ttggcgactt ccttgccgtc aatgctcaac gtgcctgtgc cgcctttgcc ggggccaggt
     4021 ccgtcatact tgaagtcgaa gacaagggta tgcttgccgg ccgcgagtgg cgcagtgcct
     4081 tcccagcgga aacgctccag tccgagcagg ttgtagagga acaccggctt gcctttaagc
     4141 acatacagcc catatccgcc gaagcgtccg ccgttggtca cgatcatgcc ttcgccgccg
     4201 cccgcgggta cttctacttc agcgctaatg gtgtatgact tgttcaggat gttgggtgcg
     4261 ttggcgccgg ggatgccggt gaccacactt gagtatgtga agaccgtgcg tccagcggta
     4321 gcgctgggcc gtggcgcaat gacgcgagca agaatgctgt tatccagcgg gaagacgttg
     4381 tacttcgtcg cctgcatcag aaacagctcc tgcatttcgc gcagcttgtc gggctgggaa
     4441 gcagccagat cattcgactc cgagtaatca tcggtgatgt tataaagctc ccatttgtag
     4501 ccgttcatta cttcgggcat ttcggccttg cccatgagcc acggcggcgc gggaggcgtg
     4561 gtggtggcga tccagccgtt gtgatagatg gcgcggttgc cgaagatttc aaagtattgc
     4621 gtgtcatgcc tgctggttgc atttgcatta gccttgtcga aggtgtaagc catgctcacg
     4681 ccttcaatcg gcttttgcgc gattccattc accatgaccg gggcctcaat gcccgtggcc
     4741 tccaggatgg tgggcacgat atcgatcacg tggtggaatt gcgtgcggat gccgcccggg
     4801 tcattgatgt ggccgggcca cgcaatgacc gccccctggc gtgtgccgcc aaagtgcgaa
     4861 gccacctgct tcatccactt gaagggcgag tcaaaggccc acgcccacgg cactgccata
     4921 tgcggctgtg tctgcggcga tccccaggct tccaggaatt tgagctgggg ctgaacaggg
     4981 atgttaattc cctgaagcgg cgccaggtca aacggtgtgc cggtcatgga gccttctgaa
     5041 ctggttccat tgtcaccggt gatgtacacg atcagagtgt tttcgagctt gccctgctcc
     5101 gctacttcct taattacgcg gccaatctcg tagtcggtgt aggcgacaaa tgcggcgtag
     5161 acatcagcct gcttgatgaa caacttcttc tcatcggggc tgagtgtttc ccagcggggc
     5221 agtttcacgc cgttgtattc cggctgcccg tcaggccagt cactgagctt ggtgttgggc
     5281 gggatcacgc ccagcttctt ctggttttca aagatctgct cgcgcactgc attccagcct
     5341 ttgtcaaaaa ggtgaagcgc gctgattttc tggatccact ctttggtggg ctggtgcggc
     5401 gcatgggtgg cgccgggaac gtaatacata aagaacggct tgtcaggcgc ggaggcgttc
     5461 acttcacgca ggtagcgtat ggcatcatcc gccatgccgg tgaccaggtt gtaattggac
     5521 tgctcgcgcc aggggaagat gggcgtggta ttgcggaata gatagggcgt gtactggtcg
     5581 gtctcgccgc ccatgaagcc ataaaaataa tcaaagccca ttccaatggg ccattgatcg
     5641 aagggaccag caaggctgta ttgataatcc ggcgtgttgt ggttcttgcc gaaccaggaa
     5701 gtggcgtaac cgttgttttt caggattgcc ccgatggttg cgttatccgg gccaatgacg
     5761 gagtcgtaac ctggaaatcc ggtcgcctgc tcggccacca cgccgaatcc cacggaatga
     5821 tgattgcggc cagtgatgat ggcggcgcgg gtaggcgagg acagcgctgt ggaatggaac
     5881 tgggtgaagc gaagtcccac acgcgcgagc tggtccatgg tgggcgtggg gatcacgccg
     5941 ccgaaggtgc tggagacgcc atagccggcg tcatcggtca tgatgagcag cacgttggga
     6001 gcgccttttg gaggaacaac tcgcgggtcc caatatggcc gggacgtttt ggcatccagg
     6061 ctgatctcgc cgccaaattg agtgggcggc gcgggcagat atctgccgtc aatagtggtg
     6121 gtggcgtttg gggctccggg tgtaccggtg gtctgctggg caatggccgg aactgtggcc
     6181 accagcagcg ctcctccaaa cacctgcaaa gtttttgctg aggtcatctt cgagcactcc
     6241 tttctgactg ggcgcagatg ttcacgggag ggacgaggtg cgcgccaagc ggggcagggc
     6301 atgcctctaa ttcacttata gggtgggaac aaatcagatg cgactggcag aagtgacagc
     6361 aatcgccgac atcgtcgtca tcgccgggac ggagcagcca acgtccagtt gtggaaatgt
     6421 agctgcaaac ggagaaacag tctttcgtga tgtcagttgg aagattcctg ta
//
LOCUS       DASQYP010000344         5175 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_97361, whole genome shotgun sequence.
ACCESSION   DASQYP010000344 DASQYP010000000
VERSION     DASQYP010000344.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 5175)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5175)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5175
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_97361"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(167..1042)
                     /gene="proC"
                     /locus_tag="VE783_11175"
     CDS             complement(167..1042)
                     /gene="proC"
                     /locus_tag="VE783_11175"
                     /EC_number="1.5.1.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR00112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004735 - pyrroline-5-carboxylate
                     reductase activity [Evidence IEA];
                     GO_process: GO:0006561 - proline biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyrroline-5-carboxylate reductase"
                     /protein_id="HYX54003.1"
                     /translation="MPNPATSSAIQAQPKKSAVSGAQKKIAVLGCGKMGTILLQGFLQ
                     QGLMQKEEVIATVQHEEHRRELARELHGVTVSTDNRAAVTGAPIVLLGLKPQALPQVL
                     EEIAPVLAPETLLISIAASTTTSFIQEHVNKNVHVVRAMPNTPAMVRAAMTAICAGPS
                     ARQEHLEITKNLFESIGRVAIVDEKHMDAITALSGSGPAFAFVILESLAEAGVKVGLP
                     RDMATTLAAQTLFGASKLALETGHHPALLKDAVTTPAGCTIEGLIELEKGGLRVTLIN
                     AVIKTTSRARELMTS"
     gene            1214..2512
                     /locus_tag="VE783_11180"
     CDS             1214..2512
                     /locus_tag="VE783_11180"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar MFS transporter"
                     /protein_id="HYX54004.1"
                     /translation="MVIANTSPVVHSDSAFSAPVKTDKAAMAMVSSLFFAWGFLTCLN
                     DILIPHLKNIFDLNYAEVMLVQFAFFSSYFVFSMPAGRIVEWLGYKRAMVTGLLTMAC
                     GALLFVPAASIPAFALFLTALIVLAAGMTVLQTSANPYVAILGPPRTASSRLNLTQGF
                     NSLGTTLAPWFGSWLILGAAAVAVNEDTMHAMNTAQLHAYRLQQAATVKMPYVGLSVA
                     LVVLAVIVGMFKLPVMEYAEAHGHVTESVWQHRRLVLGAVGIFVYVGAEVAIGSLMTN
                     YFSQREIGNMSLASAAWYLQFYWGGAMLGRFAGSALLQRLRTQKLLAFNATVAAALVV
                     ASMLTVGHWAMWTLIAVGLFNSIMFPSIFTLAIERLGPLTGKGSGLLVAAIVGGAIVP
                     ELQGVLADRIGIHHAFVLPVLCYAYIVYYAVRGARESVEV"
     gene            complement(2829..3962)
                     /gene="nadA"
                     /locus_tag="VE783_11185"
     CDS             complement(2829..3962)
                     /gene="nadA"
                     /locus_tag="VE783_11185"
                     /EC_number="2.5.1.72"
                     /inference="COORDINATES: protein motif:HMM:NF006883.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quinolinate synthase NadA"
                     /protein_id="HYX54005.1"
                     /translation="MSTALAPVIERPPVCSLENYLVLPDRTMDQRIADAKRALGDRLV
                     VLGHHYQRDEVIRFADFRGDSYKLSQEAARTKAEYVVFCGVHFMAESADVLGTSGQQV
                     VLPDLNAGCSMADMAEIGQVEACWEELVKLGLTDETGHGITPLTYMNSTAAIKAFCGE
                     RGGLVCTSSNAGAAFDWAFKRNEKILFLPDQHLGRNTASAMGIPLDQCVVWDPFQVMG
                     GATPEELRQAKVILWKGHCSVHQRFLPEHVDRVRSNHPGIQVIVHPECRWEVCQKADG
                     IGSTEVLIKMIEKSPAGTSFAVGTEIHLVNRMAKEFAAQNKTVISLDDSGCLCTTMFR
                     ISPQHLCWALENLVDGNVVNQIKVSPEVKHWARVALDRMLEIQ"
     gene            4391..4849
                     /locus_tag="VE783_11190"
     CDS             4391..4849
                     /locus_tag="VE783_11190"
                     /inference="COORDINATES: protein motif:HMM:NF025819.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M67 family metallopeptidase"
                     /protein_id="HYX54006.1"
                     /translation="MLQISKADYDLIRWEAERGYPHECCGILLGKIIGTDRMVTLTVP
                     CENVRSDSPGNRYRIDPQKVIAALKLARSRSETIVGFYHSHPDHPAQYSETDLTEAHW
                     FDCSYVITSVERRHATAINSYVLTGTEQHKGFEPEEIEILAYERALPIAL"
     gene            4988..>5175
                     /locus_tag="VE783_11195"
     CDS             4988..>5175
                     /locus_tag="VE783_11195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_257790190.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008641 - ubiquitin-like modifier
                     activating enzyme activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ThiF family adenylyltransferase"
                     /protein_id="HYX54007.1"
                     /translation="MATTLAPELPTLSNEEVLRYSRHLIMPEVGMEGQQKLKAAKVLC
                     IGTGGLGSPLALYLAAAGV"
BASE COUNT          978 a         1411 c         1673 g         1113 t
ORIGIN      
        1 agaccgttag caaagtacag atcgaaaagg ctcagtaaga acaggagcca cttcattagg
       61 atgagaacct ccttctcacc ggaatacgct gctccccccg caacagggta ggttggacaa
      121 ccggccagcg gtggagtgcc gcaacgagag tcgcagacaa ccagcgctag ctggtcatca
      181 gctcccttgc ccggctggtg gtcttgatca cggcgttgat cagcgtgacg cgcaggccgc
      241 ctttctcgag ttcgatcagg ccttcaatgg tgcagccggc cggggtggtg acggcgtctt
      301 tgagcagggc cggatggtgg ccggtttcga gcgccagctt ggaggcgccg aagagagtct
      361 gggcggcgag ggtggtggcc atgtcgcggg gcaagccgac cttcacgccg gcttcagcca
      421 gcgattccag gatgacgaag gcgaacgccg ggccgctgcc ggaaagcgcg gtgatggcgt
      481 ccatgtgctt ttcgtcgacg atggcgacgc ggccaatgct ctcaaagagg ttcttggtga
      541 tttccaggtg ctcctggcgc gcggaagggc cggcgcaaat agccgtcatg gcggcgcgga
      601 ccatggccgg tgtgttgggc atggcgcgga ccacatgcac gtttttattt acgtgttcct
      661 gaatgaagct agtggtcgtg gaagcggcaa tggagatgag cagcgtttcc ggggcgagca
      721 cgggagcgat ttcttccagc acctgcggca gcgcctgcgg cttgaggccc agcagaacaa
      781 tcggtgcgcc ggtgacagcg gcgcgattgt cagtggagac ggtgacgccg tggagttcac
      841 gcgccagctc gcggcggtgc tcctcatgct gcacggtggc gatgacttct tccttctgca
      901 tcaggccctg ttgcaggaag ccctggagaa ggatggtgcc catcttgccg cagccgagca
      961 cggcgatttt tttctgcgcg ccggaaacgg cagatttttt tggttgcgcc tgaatggcgg
     1021 acgaggtggc tggatttggc atggtcggct cttccttttt atagggagtt ttcccgctcc
     1081 gcgagtttgc cctccggggg aaaacaaaac ccgctgcgcg gagcagcggg ccgatcacca
     1141 gattctgggg gcaatatagc ccagttatgg tgcagaggca acaggcgaag gtaactggta
     1201 gtctttagct cgcatggtca tcgcaaacac cagcccggtt gtgcattcag acagcgcttt
     1261 cagcgccccg gtgaagacag acaaggccgc catggcgatg gtatcaagcc tgttctttgc
     1321 ctggggattt ctcacctgcc tcaatgacat tctgatcccg cacctgaaga acatctttga
     1381 cctgaactac gccgaggtga tgctggtgca gtttgcgttc ttctcgtcgt actttgtgtt
     1441 ctccatgccg gcggggcgga ttgtggaatg gctcggctac aagcgcgcca tggtaaccgg
     1501 actcttgacc atggcctgcg gcgcgctgct gtttgtgcct gcagcttcca ttccggcgtt
     1561 cgcgctgttt ttgacggccc tgattgtgct ggccgcgggg atgactgtgc tgcagacgtc
     1621 ggctaatccg tatgtagcga ttcttggtcc gccgcgaacc gcgtccagca ggctgaacct
     1681 gacgcaggga ttcaactcgc tgggcaccac gctcgccccg tggtttggaa gctggctgat
     1741 tctaggcgct gcggcggtgg cggtgaatga agacaccatg cacgccatga acacggcgca
     1801 gctgcatgct tatcgattgc aacaggcggc cacggtgaag atgccgtacg ttggactgag
     1861 tgtggcgctg gtggtgctgg cggtaatcgt ggggatgttc aagctgccgg tgatggaata
     1921 tgccgaagcg cacggccatg tgacggagag cgtatggcag catcggcggc tggtgctggg
     1981 agctgtgggc atctttgttt atgtaggcgc ggaagtggcg atcggcagcc tgatgacgaa
     2041 ctacttcagc cagcgcgaga tcggcaacat gagtctggca tcggccgcgt ggtacctgca
     2101 gttttactgg ggtggagcga tgctgggccg ctttgccggg tcggcacttc tgcaacggct
     2161 gcgcacgcag aagctgctgg cgttcaacgc gacggtggcc gccgcactgg tggttgcctc
     2221 aatgctgacg gttgggcact gggcgatgtg gacgctgatc gccgtggggc tgttcaactc
     2281 catcatgttt cccagcattt ttacgctggc gattgaacgg ctgggaccgc tgacggggaa
     2341 aggatcaggc ctgctggtgg cggcgattgt cggtggtgcg attgtgccgg aactgcaggg
     2401 cgtgttggcg gaccggattg gtatccatca cgcgtttgtg ttaccggtgt tgtgctatgc
     2461 gtacattgtt tattacgcgg tcaggggagc aagggagagc gtggaggtgt gagttttctg
     2521 gtgtcgcacc tacggcgctc aaccatcgtt ttgacgacca cccccggttt cgcttcgctt
     2581 caccgggggc taagctcatg gcgcgcctac cggcgctcgg agcaacgctt agcgggagag
     2641 tgtattaacc ctcggcactc aggatgacgg aagatcggcc ggggattgat gtgagtggca
     2701 gtgcagtgct caggtgcaag ggtcagtaaa tcatcggtcg accctcgcac ctataagcag
     2761 tttcgctctt tgacaactta aaaacgcaag ttactcgttc tggtgcggct ccgtggtaaa
     2821 tagcgtcgct actggatttc cagcatgcgg tccagcgcca ctcgggccca gtgcttcact
     2881 tccggcgaga ctttgatctg gttgaccacg ttgccgtcca ccagattttc cagcgcccag
     2941 cacaggtgtt gcggcgagat gcggaacatg gtggtgcaga ggcagccgga gtcgtcgagc
     3001 gagatcacgg ttttgttttg cgcggcgaac tctttggcca tgcggttgac gagatggatc
     3061 tccgtgccca cggcgaagct ggttccggcg ggcgacttct cgatcatctt gatcaggact
     3121 tccgttgagc cgatgccgtc agccttctgg cagacctccc agcggcactc gggatgcacg
     3181 atcacctgta tgcccgggtg gttggagcgt acgcgatcga catgttcggg caggaagcgc
     3241 tgatggaccg agcaatggcc cttccagaga atgactttgg cttggcgcag ttcttccggc
     3301 gtggcgccgc ccatgacctg gaatggatcc cagaccacgc actggtcaag cggaatgccc
     3361 atggccgaag ctgtgttgcg accgagatgc tggtccggca gaaagaggat tttctcattg
     3421 cgcttgaatg cccagtcaaa agctgctccg gcattcgatg atgtgcagac caaaccgccg
     3481 cgctcgccgc agaaggcttt gatggccgcg gtggagttca tgtaagtgag cggcgtgatg
     3541 ccatggccgg tttcgtcggt gagccccagc ttgaccagct cttcccagca ggcttccacc
     3601 tggccaatct ctgccatgtc tgccatggag cagccggcgt taaggtcggg cagcaccacc
     3661 tgctggccgc tggtgccgag cacgtcagcg gattcggcca tgaagtggac gccgcagaag
     3721 accacgtatt cggccttggt gcgcgcggct tcctgcgaga gcttgtagga gtcgccgcga
     3781 aaatcggcga agcggatcac ctcgtcgcgc tggtagtggt gtcccagaac aaccaggcgg
     3841 tcgccgagtg cgcgtttggc atcggcaatg cgctggtcca tggtgcggtc cgggagtacc
     3901 agatagtttt caagcgagca tacgggtggc cgctcgatga cgggagcaag tgctgtcgac
     3961 atgtatgtgc cgccttcagt tccataggaa cggggatgtt gaaagcatcc gcaggctcca
     4021 gtgggttcgc tgcaccagtt tcggttcggt gcccaatcca cggggatgtt gaagcccgca
     4081 gccttacctt attgatgctc tggaaaccgc ggggacgcaa aaactaagag ctgacgcatc
     4141 cccttcagag caatacatta ttgtggcact caggcggcgg gaagggcaag taggcgaggt
     4201 tttaagcggc tttcagacga atgcaccgtt cgcggtgcag cgtaggtgac aaaaaaatct
     4261 gcaacagcga tgatgcaaaa actctgagaa tcgtctaaga ttggcttcct tcgtcggtac
     4321 ggccagcttc agagaagagg cgtttcatcc gggaaacagc ctcacaagcg ccacttccca
     4381 ggagacccct atgctgcaga tcagcaaggc ggattacgac ctgatccgct gggaggctga
     4441 acgcggttat ccccatgagt gttgcgggat actgctggga aagatcattg gaactgaccg
     4501 catggtgacc ctgaccgtgc catgcgagaa cgtgcgtagc gattcgcccg gaaaccgcta
     4561 tcgcattgat ccgcagaaag tgattgccgc gctcaagctg gcgcgcagcc gctcagagac
     4621 gattgtcggg ttctatcact cgcatcctga ccatccggcc cagtattcgg agactgacct
     4681 gacggaagcc cactggtttg actgctcgta tgtgatcacc agcgtggagc gccggcatgc
     4741 aacggccatc aactcttatg tgctcaccgg taccgagcag cacaagggat ttgagccgga
     4801 ggagattgag atcctggcgt acgagcgggc gctgccgatc gcgctctgag tggttataat
     4861 aagtaaccat gtttctgccc tgcctgcgaa tgtgcctctg ccgcggctgc tagcgccggt
     4921 ctgcccttct tgcgtttagc aagctcctgt tacgtggtta cgtacaatct aacgaaagga
     4981 tttttccatg gccaccactt tagcccccga actgccgaca ttaagcaatg aagaagtgct
     5041 gcgctactcg cgccacctga tcatgccgga agtgggcatg gaaggtcagc aaaagctgaa
     5101 agccgcgaag gtgctgtgca tcgggaccgg tgggttgggc tccccgcttg cgctttatct
     5161 tgccgccgcc ggcgt
//
LOCUS       DASQYP010000345         3344 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_312093, whole genome shotgun sequence.
ACCESSION   DASQYP010000345 DASQYP010000000
VERSION     DASQYP010000345.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 3344)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3344)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3344
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_312093"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(223..1914)
                     /locus_tag="VE783_11200"
     CDS             complement(223..1914)
                     /locus_tag="VE783_11200"
                     /inference="COORDINATES: protein motif:HMM:NF019604.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HYX54008.1"
                     /translation="MSAALTSANLPHLSALDERTQSFPILTEAQIARIRPAAKLRKVS
                     PGEILFEPGDTEIPFFVLLSGKMDIVQPDYSGERAVATHDPGEFTGEITMISGRRSLV
                     RGRVTEAGEFLQMSNDELRALVGRDAELSEIIMRAFILRRLQLISRGLGNVILMGSRH
                     SANTLVLREFLTRNGHPYTYVDLDTDKTSQELLDRFHVKLEDVPVIICNVGGNVMKNP
                     TIQKLAECLGFNPAVNQSQVRDVVIVGAGPSGLAAAVYAASEGLDALVIETSFPGGQA
                     GSSSKIENYLGFPTGVSGNELAARATAQAQKFGAHMVVARSVVKLECSGRPYKVVLDN
                     GDVILTRAVVISTGAQYNKPAIPNLQKFEGQGIYYGATYIEAQLCGDDEVIIVGGGNS
                     AGQAAVYLAQTAKKVHILVRSGGLADTMSRYLIQRILENPQIELHTKTEIVALEGDTR
                     LERVTWLDKATGKKSTHEIPHVFIMTGASPRTEWLQGCVAMDDKGFILTGRDLEALNN
                     GFGWHLQRSPQMLETSLPGVFAVGDVRSGNVKRVASAVGEGAISVHMVHRVLAEL"
     gene            complement(2087..2389)
                     /locus_tag="VE783_11205"
     CDS             complement(2087..2389)
                     /locus_tag="VE783_11205"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX54009.1"
                     /translation="MSDLCYMVSVSSLKEILATQATEQARYKVIMGLDMVTVIHYGVT
                     GVLHQVAFPIAYEIPEIDPEEGTMVLMVATERSREWESFWMPVEKRLTHCSTTAPA"
     gene            2987..>3344
                     /locus_tag="VE783_11210"
     CDS             2987..>3344
                     /locus_tag="VE783_11210"
                     /inference="COORDINATES: protein motif:HMM:NF014215.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CocE/NonD family hydrolase"
                     /protein_id="HYX54010.1"
                     /translation="MKLSFIAVLLLASISFAQTPSPTPAATPQYPNYPSETPADFKPA
                     TSTWDYERREAEIPMRDGVKLHTVILVPRSATKSAQAPILLTRTPYNADELTSYTGSP
                     HLGPIIAGYDNAVEPIV"
BASE COUNT          643 a         1087 c          892 g          722 t
ORIGIN      
        1 aacgccacat cgttggcgcc cgcccggcca gagactcagg cgtgaacttg cctttcagcg
       61 ccgccagatc gaaccgtaca tacaatgagc cgccgtcttt ggggcagata gtctgcggct
      121 ggttggggtc aatgtgatca ccgcatttgg tgcattcgag ataagcaatc cgtgccatgg
      181 aaaaagtcta acaaacacct cttatagcga tgttcctgct catcacagct ccgccagcac
      241 tcgatgcacc atgtgaaccg atatggcgcc ttcacccacg gctgaagcca cgcgcttcac
      301 gttgcccgat cgcacgtcgc ccaccgcgaa cactcccggc aagctcgtct ccagcatctg
      361 cggcgaccgc tgtagatgcc agccgaagcc gttgttcagc gcctcgagat cgcggccggt
      421 caggatgaag cctttgtcgt ccatggcaac gcagccctgc agccactctg tgcgcggcga
      481 agcgccggtc atgatgaaga catgcggaat ctcatgcgtt gatttcttgc cagtcgcttt
      541 gtcaagccac gtcacgcgct ccagccgcgt gtcgccttcc aacgctacga tttcggtctt
      601 ggtgtgcagc tcaatctgcg ggttttccag aattctttgg atcaggtagc gcgacatcgt
      661 gtccgccagc ccgccggagc gaacaagtat gtggaccttc tttgccgtct gcgccagata
      721 aaccgctgcc tgccccgctg aatttcctcc gcccacgata atcacttcat catcgccgca
      781 gagctgcgcc tcaatgtagg ttgcgccgta gtaaattccc tggccttcaa acttctgcag
      841 gttcggaatc gccggtttgt tgtactgcgc gccggtggag atcaccaccg cgcgcgtcag
      901 gataacgtcg ccgttatcca gcacaacttt gtacggacgg cccgaacact ccagcttgac
      961 cacgctgcgc gccaccacca tgtgcgcgcc gaatttttgc gcctgcgccg tggcccgcgc
     1021 ggccagttca ttgccggaaa cgcctgtcgg aaagccgaga tagttttcaa tctttgaact
     1081 tgatcctgcc tgcccaccgg gaaatgaggt ctcaatcact agcgcatcca gcccttcaga
     1141 agccgcatac accgcggcgg ccaacccaga cggtccggcg cccacaatca ccacgtcgcg
     1201 tacctgtgac tggtttaccg ccggattaaa gcccagacac tcggccagct tctggatggt
     1261 ggggttcttc attacgttgc cgcccacgtt gcagatgatc accggcacgt cttccagctt
     1321 cacgtggaag cggtccagca gctcctggct ggtcttgtcc gtgtccagat caacgtatgt
     1381 ataaggatgg ccgttgcgcg taaggaactc acgcagcacc agcgtattcg ccgagtggcg
     1441 cgagcccatc aggatcacgt tgcccagccc gcggctgatc agctgcaagc gccgcaggat
     1501 gaaggcgcgc ataatgatct cgctcaactc ggcgtcgcgg cccaccagcg cgcgcagctc
     1561 atcattcgac atctgcagga actcgcccgc ctcggtcacg cgccctcgca ccaggctgcg
     1621 acgtccggag atcatggtga tctcgccggt gaattcgccg ggatcgtgcg tggccaccgc
     1681 gcgctcgccg ctgtaatccg gctgaacgat atccatcttc ccggagagca gcacaaagaa
     1741 cggaatctcc gtgtcgccgg gctcgaacag gatttcaccg gggctgactt tgcgaagctt
     1801 cgccgcgggg cgtatccgcg caatctgcgc ttccgtcaaa atgggaaatg attgcgtgcg
     1861 ttcgtcgagt gcgctcaggt gtggcaggtt ggcgctggtc agtgcggcag acatgcgggc
     1921 ctcccaatcg gcgatttccg tgcggccata atagatgata cggggccgcc gttgggttca
     1981 ggcgcgctgt gcgaggcgtt tatgccgtcg cgcgaaggtc gtctggcgcc gccttggcag
     2041 gcgccagcat tcggaaagac tccagcgttc gcggagagga aagagtttac gcaggagccg
     2101 tcgtcgagca gtgggtgagg cgcttttcca ccggcatcca gaagctctcc cactcgcggc
     2161 tgcgctcggt ggcaaccatc agcaccatgg tgccttcttc cgggtcgatt tcgggaatct
     2221 cgtaggcgat gggaaacgcc acctggtgaa gaacgcctgt cacgccgtag tggatcacgg
     2281 tgaccatatc caggcccata atcactttgt agcgcgcttg ttcggttgct tgcgtggcca
     2341 gaatttcttt cagtgagctc acgctcacca tgtaacaaag gtcgctcatc gtgtcctccg
     2401 gaataggaca gaaaccgctt gacttcggca gatccgtcat ccgccttggc tattatttct
     2461 attcctgcag tcttaaccga ttcttggagc aacattagat tgactaatct tttggtcacg
     2521 taccaactcc ctaactgctt tgtttccagc cgttttaccg cagagaacgc agagagcgca
     2581 gaggaatgaa ctttctgtgc gatctctgcg ctctctgccc tgaaatagac ccaaccttgc
     2641 catgcccgtc gccgacttgc cagaatcttt cccactgaag gacccacccc gacagagtgc
     2701 gacgccgagc ttgcgaggcg agcaggacga ggggccggct ccgctgccgc ctcgcgtgag
     2761 cccagatcaa atcggccttt cagctatcac gctcaatcat caatcccggc gatcatggca
     2821 atcctggcaa ttcttcaatc tgtgttcatc tgtgttcgtc tgtggcgaat cccccttttc
     2881 tgattcgtgt tcttccgcgt tcattcgcgg cgaatcccat cttttctctg cgacctctgc
     2941 gtcctctgcg gtaaaacgct cccgcattta taatttcgcc ttcgccatga aactctcatt
     3001 catcgccgtc ctgctcctcg cctccatctc attcgctcaa acgccgtcgc ccactccggc
     3061 agccacgccg cagtatccca actatcccag tgagacgccg gctgacttca agcctgccac
     3121 ctccacctgg gactacgagc gtcgagaagc cgagatcccc atgcgagacg gcgtgaagct
     3181 gcacacggtg atcctcgtcc cgcgctcagc caccaagtct gcgcaagcgc ctatcctgct
     3241 cacacgcacg ccttacaatg ccgacgagct caccagctac accggcagcc cgcatcttgg
     3301 gcccatcatc gccggctatg acaacgcggt tgagcctatc gttg
//
LOCUS       DASQYP010000346        10871 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_123728, whole genome shotgun sequence.
ACCESSION   DASQYP010000346 DASQYP010000000
VERSION     DASQYP010000346.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 10871)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10871)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10871
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_123728"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1353)
                     /locus_tag="VE783_11215"
     CDS             complement(<1..1353)
                     /locus_tag="VE783_11215"
                     /inference="COORDINATES: protein motif:HMM:NF040138.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PKD domain-containing protein"
                     /protein_id="HYX54011.1"
                     /translation="MRFLMRALAVVLLGTCFSVTALAGTDPQPVSSATETADGNFRPA
                     QPWFGHYSALTPPSNALPAPSSSDEDFPRVELFGGYSYIRLNVKGLTPALNQNFNNHG
                     GTGAVALNVNRWFGLVADFGAYRVSDLPSGVSGSQYTFLFGPQFSFRHERWTPFLHAL
                     FGADRVASKVTGTNTGFFNSTFNENKFAMALGGGFDLNLGKHLAWRVVQAEYLLTKFV
                     DANNNQQNNIRAATGLVVRFGGAAPPPPAPVNHPPTISITPNPSKLTEGSGDSSVIQA
                     KAQDPDNDTLTYTWSATGGTIEGSGPEVHWNPAGLKPGTYTITSKVDDGKGGTASSSA
                     DVTIEARPNRNPTVTCAAAPPSVTAGQPVTITATGSDPDNDPLTYSYSATGGTVSGTG
                     PSGNFNTTGLKPGNYTVTCKADDGRGGTAQSTTNVEVQAPAEQKQLEVRLSLHSIYFP
                     T"
     gene            1465..1884
                     /locus_tag="VE783_11220"
     CDS             1465..1884
                     /locus_tag="VE783_11220"
                     /EC_number="3.1.2.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR00369.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047617 - acyl-CoA hydrolase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PaaI family thioesterase"
                     /protein_id="HYX54012.1"
                     /translation="MESEANPRLQEFQQFMADAIPYWKTLGLRLVEVAPGHAVFEADV
                     SPGMMQNGVVHGGVLASIADSACAVAGISHVFPKSYATTVNLQVAYLKPLREGRFRAE
                     GKCVKPGRSVLFCEARVVDQQGTPICTASSQLLVVSR"
     gene            2208..2435
                     /locus_tag="VE783_11225"
     CDS             2208..2435
                     /locus_tag="VE783_11225"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX54013.1"
                     /translation="MARRRGNPNWGKPEPIGPIVPVVTSFEQAVKEFKLTPDQYIRST
                     RLREWARRNKNSKYIPEPLLEAWGFEIESTL"
     gene            2486..3100
                     /locus_tag="VE783_11230"
     CDS             2486..3100
                     /locus_tag="VE783_11230"
                     /inference="COORDINATES: protein motif:HMM:NF024937.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4126 domain-containing protein"
                     /protein_id="HYX54014.1"
                     /translation="MPAFSHQDILAIVVAASFASGLNVYATVATLGLLSHAGAFHLPP
                     ALHLVDSWTVIIISGALFALEFFADKIPVFDLLWNALHTFVRVPIAALLSYGAAQHLS
                     PPAQIAAAGLGGLIALAAHGGKTAVRAAVTPSPEPFSNMALSLGEDVAAVSLTWFASK
                     HPVVAAVLVLIAVIVIIFSIRFVIRALRKLFRRARGTLADTPAV"
     gene            3200..3817
                     /locus_tag="VE783_11235"
     CDS             3200..3817
                     /locus_tag="VE783_11235"
                     /inference="COORDINATES: protein motif:HMM:NF013982.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF47 family protein"
                     /protein_id="HYX54015.1"
                     /translation="MVRLIPRDTKFFEMFADMANNLGDGARLLRAMLEDFKDIETRVG
                     QLKAVEHKGDDLTHGILTKLNQTFITPFDREDIYRLASSLDDVLDFVYAAGVRLTMYK
                     ITSAPSAAYKLADLIVSQAEQLSQALSKLEKKNEHVLDHCVEINRLENEADHIARSAI
                     AALFDKERDPISLIKLKELYEVLETATDKAEDAANVLEGVVLKST"
     gene            3851..4924
                     /locus_tag="VE783_11240"
     CDS             3851..4924
                     /locus_tag="VE783_11240"
                     /inference="COORDINATES: protein motif:HMM:NF013543.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anion permease"
                     /protein_id="HYX54016.1"
                     /translation="MNTSLLLVVVSIFIALSFDFINGFHDAANSIATVVSTRVLSPKL
                     AVLWAAFFNFVAAFIFGTAVAKTISSGLVDPKQVTQYVILTALAGAIIWDLLTWWWGL
                     PTSSSHALIGGLAGAAVTRSGWHVLVTQPKLHWPMVGTIPGLGEKWMSTLIFIVLAPL
                     IGMVLGLSLMVLVSWIFQRSAPRTVDSLFRRLQLLSAACYSLGHGGNDAQKTMGIMAG
                     ALLAGGYLTPAQFAQGWGHFKWPIILSAHLAMGLGTYLGGWRIVHTMGSKITKLKPVG
                     GFCAEGAGAMTLFFLAFHGIPVSTTHTITGAIVGVGSTQRLSAVRWGVARQIVWAWVV
                     TIPASAIMAAVCFYLVKLFLPGA"
     gene            complement(4938..5369)
                     /locus_tag="VE783_11245"
     CDS             complement(4938..5369)
                     /locus_tag="VE783_11245"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HYX54017.1"
                     /translation="MIQRMSHSAIFVMDQDVAKDFYVNKLGFELKMDQSMPNGFRWLT
                     VSPKGQPDLEIILMKVAPSHTMPGNTAKVQPQDVDTIAELMKKGAFGAGVFQTADCRK
                     TYEELKGKGVEFVSAPKDQFYGVEAVFKDPFGNWFSMTQPK"
     gene            complement(5438..5875)
                     /locus_tag="VE783_11250"
     CDS             complement(5438..5875)
                     /locus_tag="VE783_11250"
                     /inference="COORDINATES: protein motif:HMM:NF024242.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family transcriptional regulator"
                     /protein_id="HYX54018.1"
                     /translation="MPRFTPAPLLNDDTFRRLCRARDLLASEFQSQVQLSHAAREACL
                     SPFHFHRLFRTAFGETPHDFITGIRIDRARQLLARGEMSVTEVCMDVGYSSLGSFSSK
                     FQALVGQAPSAYERQIRRIFGYSRPWNIILVPACFLSAFAGSE"
     gene            complement(5912..7510)
                     /gene="bshC"
                     /locus_tag="VE783_11255"
     CDS             complement(5912..7510)
                     /gene="bshC"
                     /locus_tag="VE783_11255"
                     /inference="COORDINATES: protein motif:HMM:NF021586.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0071793 - bacillithiol biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bacillithiol biosynthesis cysteine-adding enzyme
                     BshC"
                     /protein_id="HYX54019.1"
                     /translation="MESQCVSFASIPHTSRLFEDYLHHFDRVQRFFARPPLKQDWWKD
                     EISQIQYPPDRRAQVADILEKQNRDFGAGEKTLSNIQRLRQGAPAVLTGQQVGLFGGP
                     LYCVLKAVAAAIYAEKAGAVPVFWLATEDHDFAEISSVNLPEGDHLKKFAVSMPHVEG
                     APVGNIALGDETTVAVQQIQSIFGQSEVGDTLAATYRKGETFGTAFGKFYARIFAELG
                     IILLNPLDPALHRIAGSLFHSALEKSGEINAALTTRGHELEQAGYHAQVNVTPSHTPC
                     FYIDEKGMRTPIRSDGETFIADERKFSRAEILGEVERCPERFSANVLLRPVVQDYLLP
                     TLLYLGGPAEVAYFAQIETVYRSLASRVTPILPRLFATLVEPRQAKLMQRYGFTLTDM
                     FVTPEKLREEVGTRALPDSIMKSFDAAAEHLEQAVAVIHDPLQKLDRTLVDAAENAAS
                     KMRYQLQGLRDKAARAESRKNGELQRHADELSTLLYPNKELQEREVGALYFLLRYGVG
                     VLTQIKEAAQTGCAEHQVIYLQPS"
     gene            complement(7988..9877)
                     /locus_tag="VE783_11260"
     CDS             complement(7988..9877)
                     /locus_tag="VE783_11260"
                     /inference="COORDINATES: protein motif:HMM:NF021355.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-propeller domain-containing protein"
                     /protein_id="HYX54020.1"
                     /translation="MNRLLLCTALTLATLGCAIPAQTVAADSQRKSIPSKKTMQAFKS
                     EAELRLYFSEFNKNQRARQQGMAFNAAAPATPAPAKAAAEATDSVTNVQTAGVDEGGI
                     VKVHGNHLVMLRRGRLFTVAIGDKALEPVAMLDAYAPDMDPSGAWYDEMLISGDTIAV
                     IGYSYQRGGTEVNLFNIDQFGGLTYKSTYHLRSNDYYSSRNYASRLIGTKLIFYSPLY
                     YYGGGDPLASFPAIRKWHKNAGNGEFRPILAPTNVYHPERPITGGYSLALHTVTTCDL
                     ARGEFDCTATSVVGPPGRVFYVSADSVYVWMTEWNGWDKSASGHSMLYRMPLDGAAPS
                     ALNVAGSPVDQFSFLESDDHHLNVLVRSDGRGDGMWRAEHGAGDIALMRIPLSSFGDG
                     SGTVPESRYRNLPRPAGYTLQNRFVGAYLLYGAGSGWGYPQKTSSGRIYVVRWASGDE
                     HELILNHGVDRIEQLGRDAIIVGASGNDLHFTSVRLNRHPEAADEYVREAASQGELRS
                     HGFFYKPDGPDTGILGLPISTPGRPGYKNLREGSAGILFLRNKSLHFEEVGELSAEST
                     RVSDDNCHASCVDWYGNARPLFVRGRVIALLGYELVEGSLDRGKFEELRRVSYAPNRE
                     NAIKR"
     gene            10089..10304
                     /locus_tag="VE783_11265"
     CDS             10089..10304
                     /locus_tag="VE783_11265"
                     /inference="COORDINATES: protein motif:HMM:NF016167.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF433 domain-containing protein"
                     /protein_id="HYX54021.1"
                     /translation="MSRITVEPGKCGGRPCIRGYRIRVTDVLELLASGATENEILAEY
                     PFLEQADIRAALNYAAHQTDHVVLNAQ"
     gene            10649..>10871
                     /locus_tag="VE783_11270"
     CDS             10649..>10871
                     /locus_tag="VE783_11270"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX54022.1"
                     /translation="MARMRWPLILLLASSLPFCSRAQSKEGQISSDEAESLVQLVLRH
                     QKIRLDPHYCGIELLKGFVPDQYSFSVACD"
BASE COUNT         2316 a         2897 c         3308 g         2350 t
ORIGIN      
        1 ggtcgggaag tagatgctgt gcagcgaaag acgaacctcc aattgcttct gctccgcagg
       61 cgcctgaact tccacatttg tagtggattg agcagtaccg ccacggccgt cgtctgcctt
      121 gcaggtaact gtgtaattgc ccggtttcag cccggtcgtg ttgaagttcc cggatgggcc
      181 cgtgccgcta accgtcccac ccgtggccga atagctgtag gtcagcgggt cattatcggg
      241 atcgctgccg gtagcggtga tggtgactgg ctgacctgcc gtcacactgg ggggagcagc
      301 ggcacaggtc accgtgggat tgcgattggg acgcgcttcg atcgttacgt cagcagaaga
      361 gctggccgtg ccacccttac cgtcgtccac cttggaggtg atggtatagg ttcccggctt
      421 gaggcccgcg gggttccagt gaacctcagg gccgctacct tcaattgtgc cgcccgtggc
      481 cgaccaggtg taggtcagcg tgtcattatc aggatcctgc gctttcgcct gtatcacaga
      541 gctgtcaccg gagccctccg tcagtttgct ggggttcggc gtgatggaaa tcgtcggcgg
      601 atggtttaca ggagcgggtg gcggcggcgc agcgccacca aaacggacga caagaccggt
      661 ggcggcccgg atgttgtttt gctggttgtt gtttgcatcg acgaacttgg tcagcagata
      721 ttctgcctgc accactcgcc aggcaaggtg cttgcccagg ttgagatcga aaccaccacc
      781 cagggccatg gcgaatttat tttcattgaa ggtgctattg aagaagccgg tattggtccc
      841 cgtcaccttt gaggcaacgc ggtcagcgcc gaagagggcg tgaaggaacg gagtccagcg
      901 ctcatgccga aaagaaaact gcggaccgaa aagaaatgtg tactgagatc cgctcacgcc
      961 gctcggcaga tcagaaactc tgtaagcgcc aaaatcagcc accagaccga accaccggtt
     1021 cacgttcaaa gcgacggcgc cggttccgcc atggttattg aaattctggt ttagcgccgg
     1081 cgtgagtcct ttaacgttca aacgaatgta ggaatatccg ccaaagagct ccacgcgcgg
     1141 aaaatcctca tcggaagatg aaggagcagg caaagcgttg ctcggtggcg tgagggcaga
     1201 atagtggcca aaccaaggct gagcaggacg gaaattgcca tcagcggttt cagtcgctga
     1261 gctaactggc tgaggatcag tgccggccag agccgttacg gagaaacaag tcccaaggag
     1321 aacgactgcg agagcacgca taagaaaacg catcttcact ccttcaacag attgggcttt
     1381 gggggtttta ttaacgacgt atgataacag agtagttaaa tgccagcagc gcatagcgtc
     1441 gcgaaaataa gagttggtgc cgaattggaa tcagaagcaa atccccggct gcaagaattc
     1501 cagcaattca tggccgacgc gattccctat tggaagacgc tgggactgcg cctggtggaa
     1561 gtggcgccgg gacatgccgt cttcgaggcc gacgtgagtc cgggcatgat gcaaaatgga
     1621 gtggtgcatg gaggagtgtt ggcctccatc gccgattcgg cgtgcgccgt ggcagggatt
     1681 tctcacgttt ttccaaaaag ctacgccaca acggtgaatc tgcaggtcgc gtacctgaaa
     1741 cctttacgag aaggccggtt cagggccgaa ggaaaatgcg tgaagccggg caggagcgtt
     1801 cttttttgcg aggcgcgcgt ggttgaccag caaggcactc caatttgcac cgcgagctca
     1861 cagttgctgg ttgtaagccg ctgaaggcaa tcagagtatc gcagtgcacc gctgatactg
     1921 taccagtgga cactggctcc actgtactaa ggtaccatcc tgggtcaagg aaaagtaatt
     1981 tcatcgtaaa aacctgtgaa tttggcgctt tctttgttgc gcctaaagcc ctttccgcct
     2041 agactattcg gtttgcatgt gccccacaag agacactgta aagggctcag caaaacatgg
     2101 atttttccga aaaactgaaa ccattgacag ttgtcgggaa tccaaaactc aaataattgt
     2161 gtttttgtaa gcactcttca taacagacaa aggcaggaat cactgagatg gcaagaagac
     2221 gcggtaatcc gaattggggc aagcctgagc cgatcggccc catagtgccc gtggtgacct
     2281 ctttcgagca ggcggtaaag gaattcaagc tgaccccgga ccagtacata aggtccactc
     2341 gcctgcggga atgggcgcgc cgaaacaaga acagcaaata tatccctgag ccccttcttg
     2401 aagcctgggg ctttgagatt gaatcgacgc tgtaaacggg aacccagaac aagactgagg
     2461 ccgccggatg gcggcctttg cttttatgcc agctttctca catcaagaca ttctggccat
     2521 tgtggtggcc gcgagcttcg cctccgggtt gaacgtctac gcaactgtgg cgacgctcgg
     2581 cctgctgtcg catgcagggg cgtttcatct ccctccggcc ctgcacctgg tcgattcgtg
     2641 gacggtcatc attatttccg gggcgctttt tgcgctggaa ttctttgccg acaaaatccc
     2701 cgtattcgat cttttgtgga acgctctcca tacttttgtg cgggtgccga tcgccgcgtt
     2761 gctttcctac ggagcagcgc aacatctctc acctccggca caaatcgcag cagccggcct
     2821 gggcggattg atagccctgg cggcccacgg gggcaagacc gcggttcgcg cagcggttac
     2881 gccctctcct gagccatttt ccaacatggc tctgagctta ggagaagatg tggctgcggt
     2941 gtcactgacc tggttcgcga gcaagcaccc ggtagtagca gccgtgctgg tgctgatagc
     3001 cgtaatcgta atcatcttct ccattagatt tgtgattcgc gctttgcgaa agctatttcg
     3061 ccgcgcaaga ggcaccctgg ctgacacacc cgcggtctga cattgcgttt gaccagactg
     3121 cacaccgcat gcgatagttt tctgtttgtt aacgtcctgt taaaagcctc tgtgcgccct
     3181 tggagatcag ctcgcattta tggtccgcct tattccgcgt gacaccaagt tttttgaaat
     3241 gtttgccgat atggcaaaca atctgggcga cggcgcccgt cttctgcgcg ccatgctgga
     3301 ggatttcaag gacattgaaa ccagagtggg ccagctcaag gccgtggaac ataagggcga
     3361 cgacctgacg catggcattc tgacgaagct gaaccagacc ttcattacgc cctttgatcg
     3421 cgaggacatt taccgcctgg cctcttcgct ggacgacgta ctcgactttg tttatgcggc
     3481 aggtgtgcgc cttaccatgt acaagatcac cagcgcaccc agcgcggctt acaagcttgc
     3541 cgacctgatc gtgagccagg cagaacagct ctcccaggca ttgagcaagc tggaaaaaaa
     3601 gaacgaacac gtgctggatc actgcgtgga aatcaaccgg ctggagaatg aggcagatca
     3661 cattgcccgc agtgccattg ctgcactgtt cgataaagag cgagacccga tctcgctgat
     3721 caagctcaaa gagctgtacg aagtgctgga aaccgcaacc gacaaagccg aagacgccgc
     3781 caacgtactg gaaggcgtgg tgctgaagag cacttagcga cagcatgcat tccactgagg
     3841 caaacctcgc gtgaacacga gccttctgct ggtggttgta agcattttca tagccctgtc
     3901 ttttgatttc atcaatggct ttcacgatgc ggccaatagc attgcaacgg tagtttccac
     3961 ccgcgtgctc tctccgaagc tggcggtatt gtgggctgcg ttcttcaact tcgtggctgc
     4021 gttcattttt ggaacggccg tggcgaaaac gattagcagc ggactggtag atccaaaaca
     4081 ggtcacgcag tacgtgatcc tgactgcgct cgcgggcgcg atcatctggg acctgctcac
     4141 atggtggtgg ggtctgccga cgtcttcatc ccacgcactg atcggcggac tggcaggcgc
     4201 ggcggtcacg cgatcgggat ggcacgtatt ggtcacgcag ccgaaactgc actggcccat
     4261 ggttggcacg atcccaggtc tgggcgagaa gtggatgtca acgctgatct ttatcgtgct
     4321 tgcacccttg atcggcatgg tacttgggct gtcgctgatg gtgctcgttt cctggatttt
     4381 ccagcgaagc gcgccgcgga cggtcgattc tctgtttcgc aggctgcagc ttctttccgc
     4441 agcttgttac agccttggcc acggaggcaa tgacgcgcaa aagaccatgg gaataatggc
     4501 cggcgctctg cttgcaggcg ggtatctcac gccggcgcag tttgcgcagg gatggggaca
     4561 cttcaagtgg ccgattattc tctccgcaca cctggcaatg gggttgggga cttatctagg
     4621 cggttggaga atcgtgcaca ccatgggatc aaagatcacc aagctcaaac cggtgggcgg
     4681 cttttgtgct gagggcgccg gcgccatgac gctttttttc ctcgcctttc acggcatccc
     4741 ggtgagcact acgcatacga tcacaggagc aatcgtgggc gtgggttcaa cgcaacggct
     4801 ttcagcagta cgctggggcg tggcgcgaca aatcgtgtgg gcatgggtgg tgacgattcc
     4861 ggccagcgcg atcatggctg cagtatgttt ctatttagtg aagctgttcc tgcctggcgc
     4921 gtgagcaggc gatttttcta tttcggttgc gtcatgctga accagttgcc gaacggatcc
     4981 ttgaatacgg cttccacacc gtaaaactgg tccttaggcg ctgagacgaa ttcaacacct
     5041 ttccctttca actcttcata ggtcttccgg cagtctgctg tctgaaagac accggcgccg
     5101 aaagcgcctt ttttcatcag ttctgcaatc gtatccacgt cctgcggctg aactttggcc
     5161 gtgtttccag gcatggtgtg cgagggggcg actttcatca ggataatttc cagatcaggc
     5221 tggcctttag gcgagacggt aagccagcgg aagccgttgg gcatggattg atccatcttg
     5281 agttcaaagc cgagcttgtt tacgtaaaag tccttggcga catcctggtc catgacgaag
     5341 attgcggaat gcgacatgcg ctgaatcatc ggggaagcct ccgtggaagt acatggtatg
     5401 tgcgggacgg caggaatgct tcttcattct tgctgtgtta ctcgcttccg gcgaatgctg
     5461 agaggaagca agcgggaaca agaatgatgt tccagggccg ggaatagcca aagatacgcc
     5521 tgatctgacg ctcataggcg gaaggcgcct gcccgaccag cgcctgaaat ttggagctga
     5581 atgagccgag gctggaataa ccgacgtcca tgcagacttc cgtcacgctc atctcaccgc
     5641 gagccaggag ttggcgggca cggtcgatgc gaataccggt gatgaagtcg tgcggcgttt
     5701 cgccgaaggc ggtccggaaa agacgatgaa agtggaacgg cgagaggcag gcttcgcgag
     5761 ctgcgtggga aagctgaact tgtgattgga attcggaagc gagaaggtcg cgagcgcggc
     5821 agagacggcg aaaggtgtcg tcgttgagca gcggcgctgg cgtgaaacgt ggcattcggc
     5881 ggtattttac ccggtaagtg cgcccgcgat gctacgaagg ctgcagatag ataacctgat
     5941 gctcggcaca gccggtctgc gcggcttcct tgatctgcgt caacactccg actccatacc
     6001 tcagcagaaa gtagagtgca cccacttccc tttcctgcag ttccttgttg ggataaagca
     6061 gcgtggagag ttcgtcagca tggcgctgga gttcaccgtt tttgcgcgat tccgcgcggg
     6121 ctgctttgtc acgcaacccc tgtaactggt aacgcatttt tgaggcagcg ttctcggctg
     6181 cgtctacgag cgtgcggtcc agcttttgca gaggatcgtg gatcacggca accgcctgct
     6241 ccagatgttc ggcggcggca tcgaagctct tcatgatgga gtccggcaga gcgcgcgtgc
     6301 caacctcttc cctcagcttt tccggagtga cgaacatgtc cgtgagggtg aagccgtagc
     6361 gctgcatcag cttggcctgg cgaggctcaa ccagtgtggc gaacaggcgt ggcaggatag
     6421 gagttacgcg gctggcgagg ctccggtaga ccgtttcaat ttgtgcgaag taggcgacct
     6481 cagcgggtcc gccgaggtaa agaagggtgg gcagcaggta atcctgcact accggacgca
     6541 gcaggacgtt ggcgctgaag cgctccggac atcgctcaac ctcgccgagg atttccgctc
     6601 gggagaactt tcgctcgtcg gcgatgaatg tttctccgtc gctgcgaatc ggggtgcgca
     6661 tgcctttttc atcgatatag aagcacggag tgtgcgaggg cgtaacgtta acctgggcgt
     6721 gatatccggc ctgttccaac tcatgaccac gcgtggtcag cgccgcattg atctcgcccg
     6781 atttctccag cgctgaatga aacagcgacc cggcaatgcg gtgcaatgca ggatcaagag
     6841 ggttcagcag aatgatgccg agttcggcaa agatgcgggc gtagaacttg ccgaatgcag
     6901 tgccaaacgt ctcgcccttt ctgtaggtgg ctgccagagt gtcgccgact tccgattggc
     6961 cgaagattga ctggatctgc tgcaccgcga ccgtggtctc atctccaaga gcgatgttgc
     7021 ccacgggcgc gccttccacg tggggcatgg agacggcgaa tttcttgagg tggtctcctt
     7081 ccggcagatt gaccgagctg atctcagcga aatcatggtc ttcggtggcc agccagaaca
     7141 ccggaacggc gccggctttc tccgcgtaaa ttgccgcggc cacggccttg agaacacagt
     7201 agagcggccc gccgaagagg ccgacctgct gaccggtaag tacagccggc gcgccttgcc
     7261 gcaggcgctg gatgttggag agagtcttct ctccggcgcc gaagtcgcgg ttctgcttct
     7321 cgaggatatc ggcgacctga gcgcgacggt caggcgggta ttgaatttgg ctgatttcat
     7381 ctttccacca gtcctgcttg aggggtggac gggcgaagaa gcgctgcacg cggtcaaaat
     7441 gatggaggta gtcctcgaac aggcggctgg tatggggaat gctggcgaat gagacgcact
     7501 gtgattccac gttcggggac tccaccattg gcataagaag attggacgca caagcacaga
     7561 actggttgca gaaaatgttg cgcgagcgag tacggagtga ttgtaacgga atggaggggc
     7621 ggggatttgg tacttgatag tgggtttttg gtgcttggta cgccaggttt gatggggaga
     7681 atcgctgaag aggctcttga ttcagtttgt gtgatcatgc gttcgatttg tgccactggt
     7741 ttggatcggc gtcacagtga gacggcggca tgcccgtctg tacgctgaga tcatggctcg
     7801 gcgcgggcga gcggacgcga tccacgagtt atagaagaaa agcgcaggcg agggcggccc
     7861 attcgactcc ttcgcctagc tcagtcgctt agggcatgct ctgcgcttcc aggttgactg
     7921 cacgcgaaga gcgcagccca aaggctgcgc tcagaccaaa ataccaagcc ccattacaaa
     7981 gcagcttcta ccgctttatc gcattctccc gattgggggc gtagctgacg cggcgcagct
     8041 cttcgaactt gccgcgatcc aggctacctt ccaccagttc gtagccgaga agggcgatga
     8101 cgcgtccacg gacaaacaga ggacgcgcgt tgccgtacca gtcgacgcag gaagcatggc
     8161 agttgtcatc gctgacgcgt gtagattccg cgctgagctc gccgacctct tcaaagtgca
     8221 atgacttgtt acgaaggaag aggattccag cagagccctc gcgcaggttt ttgtagcccg
     8281 gacgcccggg cgtgctgata ggcaagccga ggatgccggt gtcggggcca tcaggcttat
     8341 agaagaagcc gtggctgcgg agttctccct gagaggcggc ttcgcgaacg tactcgtcag
     8401 ccgcttcagg gtggcggttc aggcgcactg aggtgaaatg cagatcattg ccgctggcgc
     8461 cgacgatgat ggcgtcgcga ccgagctgct cgatgcgatc gacgccgtga tttaggatca
     8521 gctcgtgctc gtcgccgctg gcccaacgca ccacgtagat ccttccgctg ctggtcttct
     8581 gcggataacc ccagccgctg ccggcgccat agagaaggta agcgccgaca aagcggtttt
     8641 ggagtgtata tccggcaggt ctcggcaggt tgcgatagcg ggattcgggc acggtgccgc
     8701 tgccatcgcc aaagctggag agagggatgc gcatgagtgc gatgtcgccg gcgccgtgtt
     8761 ccgctctcca catgccgtcg ccccggccat cggagcgtac caagacgtta agatggtggt
     8821 cgtcgctctc gaggaatgag aactggtcta ccgggcttcc agcgacatta agagcgctgg
     8881 gagcggcgcc atcgagcggc atgcggtaga gcatcgaatg gccgctcgcc gatttgtccc
     8941 acccgttcca ctcggtcatc cagacgtaaa cggaatcagc ggagacgtaa aacactcgcc
     9001 ccggaggtcc gactaccgaa gtcgcggtgc aatcgaattc gccgcgcgcg aggtcgcagg
     9061 tggtcaccgt gtgcagggcc aggctgtaac cgccggtgat ggggcgctca gggtgataga
     9121 cgtttgtggg cgcgagaatg ggacgaaact caccgtttcc tgcatttttg tgccatttgc
     9181 ggattgccgg gaagctggcc agtgggtcgc ctccgccgta gtaatagagg ggcgagtaaa
     9241 agatgagctt ggtgccgatc agccggctgg cgtagttgcg cgaagagtaa tagtcgttcg
     9301 agcgcagatg gtacgtggac ttgtaagtga ggccgccgaa ctggtcgatg ttgaacagat
     9361 tgacctccgt cccgccacgc tggtagctgt agccgatcac ggcgatggta tcgccggaga
     9421 tgagcatttc gtcataccaa gcgccgctag gatccatgtc cggcgcatag gcgtcgagca
     9481 tggcgacagg ttcaagagct ttgtcgccaa tggcgacggt gaagaggcgt ccgcggcgca
     9541 gcattaccag gtggttgccg tggactttca cgatgccgcc ttcgtcaacc ccggcggtct
     9601 ggacattggt aaccgaatca gtggcttctg ccgcagcctt ggcaggagcg ggagtggccg
     9661 gggcggccgc gttgaatgcc ataccctgct ggcgggcccg ctggttctta ttgaattcac
     9721 tgaaatacag gcgaagctca gcctccgact tgaaggcctg catggtcttc ttcgaaggaa
     9781 tggatttgcg ctgcgaatca gccgcgacgg tctgggccgg aatggcgcag ccaagtgttg
     9841 ccagagtcaa agccgtacat aaaagcaagc ggttcactac gtcacctccg caggttcccc
     9901 acgtactctg aacgtggagg ttggaggagt ttgcgtggca ttttcggaca gaggggtaga
     9961 cacggaagaa agcgaatctg gtggccgtga ctcaacaaac ccggctcttt ggcgtgcgca
    10021 gcaccgcaaa acctgttgat ttcctctgcg aaggcatcgt atttttaagt catatggaag
    10081 ctgactacat gagtagaatc actgtggagc ccgggaaatg cggagggcgg ccctgcatac
    10141 ggggttaccg cattcgcgtc accgatgtgc tcgagcttct tgcttctggc gcgaccgaga
    10201 acgagattct ggctgaatac cctttcctgg aacaggctga tatccgagcg gcgctgaact
    10261 acgctgccca ccagactgat cacgttgtcc tgaacgcaca gtgagattcc tgatcgacaa
    10321 tcagctgccg ctaaagctgg cacgcttcct ccaagagaac ggccacgatg ttgaacacgt
    10381 tttgagattg gactggcgca gacagatgac aaagtcgtcg ccgagtacgc aatctctcac
    10441 gaacggatct tgatcagcaa agatcaggac ttcgtttacc tggctgctcg acgtgaatcg
    10501 acattggtac tcatttgggt gcgactcgga aactgcagga cctcaaagct gctcgaagcc
    10561 ttcaaacggc tctggaacga ggttgaagct gcaataaccg ccggagagag cgtaatcgag
    10621 attcgttaaa aaggagcatc ggcgggaaat ggcgaggatg agatggccgc tgattcttct
    10681 gctggccagc agtttgcctt tctgttcccg agcccagagc aaagaaggcc agatcagcag
    10741 cgatgaagcc gagtcgctcg tgcaactggt tctccgtcat caaaagatcc gccttgatcc
    10801 tcattattgc ggaatcgaac tactgaaagg gttcgttcca gatcagtact cgttcagcgt
    10861 ggcatgcgat t
//
LOCUS       DASQYP010000347         5776 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_270178, whole genome shotgun sequence.
ACCESSION   DASQYP010000347 DASQYP010000000
VERSION     DASQYP010000347.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 5776)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5776)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5776
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_270178"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(2..739)
                     /locus_tag="VE783_11275"
     CDS             complement(2..739)
                     /locus_tag="VE783_11275"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX54023.1"
                     /translation="MVSPGNLELALASAAILGFRHGFDYDHIAAISDITSVQATSRKA
                     MQLGLLYAVGHAATVAMLGSAVIFFQLSLPHGIDRFAERLVGLTLVLLGIYVLGSMFR
                     GNYVPRSRFVLLVNGLRWLHWKLRSLWHNHEHARPAVFGYDGRSAFTIGIVHGLGAET
                     PSQLMIFLLAANLGGLSKGFLGLGIFIVGLLAMNTLMTAMAAGLFGFSSRIPRFQYAI
                     TAVTAVYSLIVGAIFLLGSAARLPALG"
     gene            1190..1265
                     /locus_tag="VE783_11280"
     tRNA            1190..1265
                     /locus_tag="VE783_11280"
                     /product="tRNA-Ala"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1223..1225,aa:Ala,seq:cgc)
     gene            1396..2742
                     /locus_tag="VE783_11285"
     CDS             1396..2742
                     /locus_tag="VE783_11285"
                     /inference="COORDINATES: protein motif:HMM:NF014081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HYX54024.1"
                     /translation="MLKRLSVSLFLLSLISGLGLAQNIAEDSANAPRPVTLVPAPPAA
                     TVYIRCGTLFSGKSDQLEQNVVIAIEHDRIKQVSRLSPPAGAQVINLSNLTCLPGMVE
                     SHTHVFLQGDRKPGQYDAQLLKQSVAYRAIEATTAAHAALDWGFTTIRDLETEGAGYA
                     DVDVRNAVNNRLVWGPRMQVVGRAMDVTGSYPLQPAYAWDVTVPIGVQIVDGVEGARK
                     AVREQLSHGTDWVKIYADRGGRIHDNILDTIPTFTLDELRAIVDETHRERHRVAAHAT
                     GLLGVHNAVEAGVDTVEHGNYIAPEDMKTMVAKGIWFVPTPYVAEYDAQWRAERAGTQ
                     PQESPGLKIEEDTFRRALQAGVKIAFGTDVGAFEWDMSPARQLVTMVKWGMTPAQALR
                     AATIGGAELMQMQNDIGTLEAGKYADIIAVQGNPLADISVMQKISFVMKGGVKFKQ"
     gene            complement(2756..4954)
                     /locus_tag="VE783_11290"
     CDS             complement(2756..4954)
                     /locus_tag="VE783_11290"
                     /inference="COORDINATES: protein motif:HMM:NF013927.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0017000 - antibiotic biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin acylase family protein"
                     /protein_id="HYX54025.1"
                     /translation="MNPKPYLIPLSIFLVIAVHSLGAAPPQDKDAARWKQQAANVTII
                     RDDWGIAHVYGKTDADAVFGAEYAQAEDDFNRVETNYINAMGRLAEAEGDSKIYQDLR
                     MKLFIDPEALKKQYTESPEWLQKLMNAFADGLNYYLYKHPEVKPRVITRFEPWMALSF
                     TEGSIGGDIERVNLTQLEAFYGNSPAAQSARLSIPVNDELAEPTGSNGMAVEPSNTAN
                     HHALLLINPHTSFFFRSELQMVSDEGLHAYGASTWGQFFIYQGFNPHVGWMHTSSGVD
                     AVDEYLETVTKKDSRYYYKFGNEERPVTVRNIVIPYKTANGMAQKTFTAYFTHHGPVI
                     REENGRWVSIRLMQKPIEALSESFLRTKATDYKSYRKTMELKANSSNNTIFADADGDI
                     AYFHGNFIPRRNTKFDFTKPVDGSNPETDWQGLLSADEAPHLLNPKSGWLYNSNNWPW
                     SCCGASSLKKADYPAYVEMGGETARGLHAIRVLENKKDFTLESLMAAAYDSYLTWFDK
                     PLPALLKAWDDAPASSPFKQKLAAQITALRGWDHRWSVSSVPTSLAIFWAEEIQKRVR
                     PDAKKAGISVEDYVGGKAQPEMLLDALAAASDKIQASFGTWKTPWGDINRFQRVNDNI
                     DPSFNDADPSIPVGFTSGIWGSLASFGAKAYPNTRKWYGTSGNSFVAVVEFGDRVRAK
                     AVTAGGESGHVNSRHFDDEAVRYSKGNLRDVYFYRSDLKGHIEREYHPGS"
     gene            complement(5323..>5776)
                     /locus_tag="VE783_11295"
     CDS             complement(5323..>5776)
                     /locus_tag="VE783_11295"
                     /inference="COORDINATES: protein motif:HMM:NF045432.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX54026.1"
                     /translation="SRHPDRVVSDMKKSLRVNKVFVDWSQNDDYKTTVCVYSLRAKEQ
                     PTVSTPVTWKEVESCLKKQDPELLVFTSDQTLARVEKMGDLFEPVLKLKQKLPKLDSL
                     EASRSSEPDAASAEPVNKSIAIKPTKANLARRRAATKSSSRRSGRQRA"
BASE COUNT         1200 a         1586 c         1729 g         1261 t
ORIGIN      
        1 gtcagcccag agccggcagt cgcgcggccg aacccaacag gaatatggcg cccacaatca
       61 ggctgtacac agcagttact gcggtgatcg catactgaaa gcgcggaatg cgcgagctaa
      121 agccgaacag tccggcggcc attgcggtca tgagggtgtt catagcaagc aggccgacga
      181 tgaatatgcc gagtccgaga aatcccttgc tcaatccgcc aaggttggcg gcgagaagaa
      241 agatcatgag ctggctcggc gtttctgcgc ccagtccgtg gacaatgccg atggtgaatg
      301 ccgaacggcc gtcgtagcca aagaccgcag gacgcgcatg ctcgtggtta tgccagagcg
      361 agcgcagctt ccagtgcagc cagcgcagcc cgttcaccag caagacaaag cggctgcgcg
      421 gaacataatt gccgcgaaac attgagccca gaacgtagat tccaaggagt accagcgtca
      481 gcccgacgag ccgttccgca aagcgatcaa tcccatgtgg caatgagagc tggaagaaaa
      541 tcacggcact acccagcatg gccacagtcg cggcgtgccc aacggcatag agcagcccaa
      601 gctgcatcgc tttacggctg gttgcctgaa cgctggtgat gtcactgatg gcggcaatgt
      661 gatcgtaatc gaagccgtgg cggaagccaa ggatggctgc tgacgccagt gccagttcga
      721 gattgccggg cgagaccatt tgcaaatgtg accttccact ttacctgaaa aaagccgcgc
      781 cgagacatca tatccgcgga tgtgagcgcc tgactttgat ttaacgcaca ccgcaatggc
      841 aggacggcct gcgcgggttg tgatctggat cacagtttcg cagctaccag ggagagtata
      901 gatggaactt ctttgatggc ggcttcgggg ctgcgttcag aaggtccgac agcagctatc
      961 gcctgagtca agctggggcg ctggaacccg cacgcgccca cgtgcaagac ttgacgccac
     1021 agccggcccc ggttgtggcg ttttattgcg agccacatct tttagccgat tgttgcgtac
     1081 acgagttcgc ttgcccatat gctaacgaga ggtttctcaa ctcgtggcct gctattttgc
     1141 tgatctcttc atcattggta aaatgaaaag gttcttccct tccacttgtg gggctatagc
     1201 tcagctggga gagcgcatcg ttcgcaacga tgaggtcgtc ggttcgatcc cgactagctc
     1261 caccattcgc aactcctgaa gagcgatccg ggcactatac cagcgcgcct aatcgaggca
     1321 tctcgtgtgc tcggcgggca tttatcatgg tcagctgctt cccggcagag ttcatcccga
     1381 tcaggagtcg ccgacatgct gaaacgcctt tccgtatccc tctttttgct ctcattgata
     1441 tccggacttg gtcttgcgca aaacattgcc gaagactcgg ccaacgcgcc caggccggtg
     1501 acactggtgc ctgcaccgcc ggcggcgacg gtgtatatcc gctgcggcac cctgtttagc
     1561 ggcaagtccg atcagcttga gcaaaatgtg gtcatcgcga tagagcacga ccgcatcaag
     1621 caggtgagca gactttcgcc acctgcaggc gcacaggtga tcaacctttc aaatttgacg
     1681 tgcctgccgg gaatggtgga gtcgcatact cacgtctttc ttcagggcga tcgcaaaccg
     1741 ggacagtacg atgcgcagct tctcaagcaa tcggtggcgt atcgcgcgat tgaggcgaca
     1801 actgcagcgc acgcggcact ggattggggc ttcaccacca tccgcgacct tgaaaccgaa
     1861 ggcgcaggct acgccgacgt ggacgtgcgc aatgccgtca acaacaggct ggtctggggg
     1921 ccgcgcatgc aggtggtggg gcgtgccatg gacgtaaccg gctcttatcc gctgcagccc
     1981 gcgtatgcct gggatgtgac agtgcccatt ggagtgcaga tagtggatgg agtggagggt
     2041 gcgcgaaaag ctgtgcgcga acagctttct catggcaccg actgggtcaa gatctacgcc
     2101 gaccgcggcg gcaggatcca tgacaacatt ctggatacca tcccgacttt tacgctggat
     2161 gaactccgcg ccattgtgga cgaaacgcac cgtgagcgcc atcgcgtggc ggcgcatgcc
     2221 accgggttac tgggcgtgca caacgccgtg gaagccggag tggacacggt agagcacggc
     2281 aactacattg ccccggaaga tatgaagacg atggtcgcca agggcatctg gtttgtgcct
     2341 acgccttatg tcgccgaata cgacgcgcaa tggagggccg agcgcgcagg cacccagccg
     2401 caggaatcgc ccggtctaaa aattgaagaa gatacttttc gccgcgcgct gcaggcggga
     2461 gtgaagatcg cgtttggcac ggacgtaggg gcgttcgagt gggacatgag tcccgcgcgg
     2521 caactcgtga ccatggtgaa gtggggaatg acgccggcgc aggcgttgcg cgctgccaca
     2581 atcggcggcg cggagctgat gcagatgcag aatgacattg gcacgctgga agccgggaag
     2641 tacgccgaca tcattgctgt ccagggcaat ccgctcgctg acatctcagt aatgcagaag
     2701 atcagttttg tgatgaaggg cggcgtgaaa ttcaaacaat agcgccttgc ccggttcagc
     2761 ttccaggatg gtactcgcgt tcaatgtgtc ccttgaggtc tgagcgatag aaatagacat
     2821 cgcgcaggtt gcctttgctg taacgcacgg cttcatcgtc aaagtggcga gagttcacat
     2881 ggccgctctc accgccggcg gtgacggctt tggcgcgcac gcgatcaccg aactccacca
     2941 cggcaacaaa gctgtttccg ctggtgccgt accatttcct ggtattgggg tacgccttgg
     3001 ccccaaacga ggcgagtgag ccccatatcc cagaagtgaa gccgacaggg atactcggat
     3061 cagcatcgtt gaatgaaggg tcaatattgt cgttaacgcg ctggaaacga ttgatgtcgc
     3121 cccagggagt tttccacgtt ccgaatgagg cctgaatttt gtcggaagct gcggcgagag
     3181 cgtccaggag catttctggt tgtgccttgc caccgacgta atcttctacc gagatgccgg
     3241 ccttctttgc gtccgggcgc acacgcttct gaatctcttc tgcccagaat atggccaaag
     3301 acgtggggac ggagctgacg gaccagcgat gatcccaccc gcgaagcgcc gtgatctggg
     3361 cggccagctt ctgtttgaac gggctcgacg ccggagcgtc atcccacgcc ttcagcagcg
     3421 caggcagcgg cttatcaaac caagtgagat agctgtcgta ggctgcggcc atgagagatt
     3481 ccagcgtgaa gtctttcttg ttttccagga cgcggatggc gtgcaatccg cgcgctgttt
     3541 cgcctcccat ctccacatag gcgggatagt ccgctttctt caggctgctg gctccgcaac
     3601 aagaccacgg ccagttgttg gagttataaa gccagccact ctttgggttc agcagatgcg
     3661 gcgcctcgtc agcagaaaga agaccctgcc aatctgtctc aggattgcta ccatcgaccg
     3721 gcttggtgaa gtcgaatttg gtgttgcgcc tgggaatgaa gtttccgtgg aagtaggcga
     3781 tgtcgccgtc cgcatcggca aagatggtgt tgtttgagga gttagctttg agctccatgg
     3841 tcttgcggta tgacttgtaa tcggtggctt tcgtgcgcag gaacgattcg ctcagggctt
     3901 cgatcggttt ctgcatcagg cggatgctca cccatctacc attctcttcg cgaattacgg
     3961 gaccatggtg ggtaaagtaa gcagtaaacg tcttctgggc cattccgttg gcggttttgt
     4021 aggggatgac gatgttgcgc acggtcacgg gccgttcttc gttaccaaac ttgtagtagt
     4081 agcgactgtc cttctttgtc acggtttcca gatactcgtc caccgcatcc acgccgctgg
     4141 aggtatgcat ccagccaaca tgcgggttga atccctgata gatgaagaac tgtccccagg
     4201 ttgatgcgcc gtaggcgtgc aggccctcat cgcttaccat ctgcagctcg gaacgaaaga
     4261 agaaagaggt gtgcggattg atcagcagca gcgcgtgatg gtttgcggtg ttggagggct
     4321 caacggccat gccattggag ccggtgggct ccgccagctc atcattgacg ggaatagaga
     4381 ggcgcgcaga ttgggcggcg gggctgttgc cgtaaaaggc ttcgagctgc gtcagattca
     4441 cacgttctat gtctccgccg atgctgcctt cggtgaaaga cagcgccatc cacggttcga
     4501 accgcgtgat gacgcgcggc ttcacctcag gatgcttata caggtagtag ttgaggccgt
     4561 cggcaaacgc gttcatcagc ttctgcagcc actccgggct ctcagtgtat tgcttcttca
     4621 gagcctcagg atcaatgaag agcttcatgc gcaggtcctg ataaattttt gagtcgcctt
     4681 ccgcttcggc cagccttccc atggcgttga tgtagtttgt ctcgacgcgg ttgaagtcgt
     4741 cttcggcctg cgcatattcc gcgccgaaga cagcgtcggc gtcggtctta ccgtaaacgt
     4801 gtgctatacc ccagtcgtca cgaattattg tcacgttggc ggcctgttgc ttccagcgag
     4861 cggcgtcttt gtcctgaggc ggtgcggcac ccaggctatg aacagcgata acaagaaaaa
     4921 tggaaagtgg aatcaagtaa ggtttgggat tcaagacagt tccttcgcta atgaagagca
     4981 gccgaacatg ttagcagatt gcgggatggc gccagcgcgg gcaaagcagt tgacgtccag
     5041 atatcgccag gaagttactt ctttttttgt cgcttcgcct aacggctccg ctccggccta
     5101 cggcagtgcg gagttgcagt ttgggcagcc tacccagccc ttattcttca gctcgctcac
     5161 gctcgcctcg gaagcgggct gggctaactc atgccccgcc tacggcgctg cagcattgtg
     5221 agctagagag tttcgctctg ccttgttcta ccgcagagtt gccccaagaa gtacggtctg
     5281 cggcttttcc agttcgtgct gcacgtggga ggcgcacgcg gttcaggctc gctggcggcc
     5341 ggagcgtctg ctgctggatt tggtggccgc gcggcggcga gccagattcg ctttggtcgg
     5401 cttgatggca atggacttgt tcacaggctc ggctgacgcg gcgtcgggtt ccgatgatct
     5461 tgaggcttcc agcgagtcca gtttgggaag cttttgtttc agcttgagaa ccggttcaaa
     5521 tagatctccc atcttctcca cacgcgcgag tgtttgatca gaggtgaaga ccagcagttc
     5581 aggatcctgt tttttcaggc agctttcaac ttctttccac gtgaccggag tggagacggt
     5641 gggctgctcc ttggcgcgca gagaataaac gcagacagtg gttttgtagt cgtcgttctg
     5701 gctccagtcg acaaagactt tattcacccg cagactcttc ttcatatcag aaaccacacg
     5761 gtccggatgg cgtgat
//
LOCUS       DASQYP010000348         3271 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_15632, whole genome shotgun sequence.
ACCESSION   DASQYP010000348 DASQYP010000000
VERSION     DASQYP010000348.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 3271)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3271)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3271
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_15632"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..382)
                     /locus_tag="VE783_11300"
     CDS             complement(<1..382)
                     /locus_tag="VE783_11300"
                     /inference="COORDINATES: protein motif:HMM:NF013482.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX54027.1"
                     /translation="MSDFSIIGKRVALVDSAGKTTGQGKYADDLSLPGMLYGKILHSP
                     VPHALIKKIDASRAEALDGVVCVVTGPDAPNKYGILPVGHDETALAVEKVRYVGDNVA
                     CVVANSEAIAEKAIELVDVEYESLP"
     gene            complement(494..988)
                     /locus_tag="VE783_11305"
     CDS             complement(494..988)
                     /locus_tag="VE783_11305"
                     /inference="COORDINATES: protein motif:HMM:NF013923.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(2Fe-2S)-binding protein"
                     /protein_id="HYX54028.1"
                     /translation="MKKELIELRVNGRRHELAIEPSELLLDVLRRELQLTGSKRGCDD
                     SSCGACTVLVDGVPALACTMLAMSLASNGPTTPEITTVEGIADHGALAAIQKAYGDWG
                     GAQCGYCTPGFMVTVKALLERNPEPTEEDIRHALSGNLCRCTGYNQMYQAIKAAIAAE
                     QQRR"
     gene            complement(1125..2054)
                     /locus_tag="VE783_11310"
     CDS             complement(1125..2054)
                     /locus_tag="VE783_11310"
                     /EC_number="2.8.3.-"
                     /inference="COORDINATES: protein motif:HMM:NF013323.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008410 - CoA-transferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA-transferase"
                     /protein_id="HYX54029.1"
                     /translation="MAKLTTMRAAIADHIPDGSSVALGLQLEQMIPFAAGHEIIRQKK
                     RELRLIGPISDILFDQMIGAGCVRDVVAAWVGNVMMGSAYNFRHATEVENPGTPGEKL
                     RVFNMTNFSIALALQAGALGVPFLPTRTAMGSDVPKGNHFFYQIISPFEPKETLLAVR
                     AIVPDVTIVHLQRADKHGNSHCWANFGVMIEAVRAAKKVIVCAEEIVDEEMIASDPNR
                     TVIPGFLVSAVVECPLGAHPSPVQGYYKRDDAFFQQYHAETKTRADFEQWAAKWIHRV
                     EDRAAYGRELGSTRVDDLRVKQHAYAAETDYGY"
     gene            2202..2750
                     /locus_tag="VE783_11315"
     CDS             2202..2750
                     /locus_tag="VE783_11315"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX54030.1"
                     /translation="MAQSQDPPKSLAEIARQAKNEAGKEHARIVLTEDSPQAERPLIP
                     DVFSGGFDNTDEILKSIDSYRLSHNPKETEQVVRIWFEKHDAMLASAIEQNRQIDQHE
                     KDRQMGYLASDAQPRSQQEYVEAQRIEIISRREDSKRKQENGLLSARIQQTFTRVRAS
                     LAGKGMKYEWFKIRCGNGNCSY"
     gene            2796..>3271
                     /locus_tag="VE783_11320"
     CDS             2796..>3271
                     /locus_tag="VE783_11320"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX54031.1"
                     /translation="MKILRRVLLVLVVLVLVAWAFVPGIVERRMNKVLNPPPYHASAA
                     AEALHKKLLVADLHADSLLWKRNLLERSSRGEVDLPRLQDGNVGIQAFTLVTTSPRGL
                     NIYKNSDDTDQIQLLAIAQGWPPPTWNSPKMRALYEASKLQRFAEDSQGKLVVIKS"
BASE COUNT          719 a         1047 c          837 g          668 t
ORIGIN      
        1 ccggaagcga ttcgtactcc acatccacca actcgattgc cttttccgcg atggcctctg
       61 aattcgccac cacgcaagcc acgttatcgc ccacgtagcg caccttctcc accgccagcg
      121 ccgtctcatc gtgcccgacc ggcaggatgc cgtatttgtt cggcgcgtct ggcccggtga
      181 ccacgcagac cactccatcc agcgcctcag cgcgtgaagc atcaatcttc tttatgagtg
      241 catgcggtac aggcgagtgc agaatcttgc cgtacagcat gcccggcagt gagagatcgt
      301 ctgcatactt gccctgcccg gtggtcttgc ccgccgagtc aaccagagca acgcgtttac
      361 caatgatgga aaaatcagac attgttttta aaatcccgag cgtagcgcag gatccctaac
      421 aaaataaagc tgctagcgac cagcctctag cttttgtttc tctgcggtct atgccaactc
      481 tgcggtaaaa ctcttaacga cgctgttgct ccgctgcgat cgccgccttg atcgcctgat
      541 acatctggtt ataaccggtg cagcgacaca ggttcccact cagcgcgtgc cgaatatctt
      601 cttccgtcgg ttccggattg cgttcgagga gcgctttcac cgtcaccatg aatcccggcg
      661 tgcagtaacc acattgcgcg ccaccccagt cgccgtaagc tttctggatc gccgccagcg
      721 ccccgtgatc ggcgatgccc tccaccgtcg tgatctcggg cgtagttggc ccgttcgaag
      781 ccaacgacat tgccagcatc gtgcatgcaa gcgccggaac tccgtccacc agcacggtgc
      841 aggccccgca ggacgagtca tcgcagcccc gcttggagcc agtgagctgc aactcacgac
      901 gcagcacatc cagcagcagt tcgctgggct ctatggccag ctcgtggcga cggccattga
      961 ctcgaagttc aatcagttcc tttttcatga tcagctgcta gcttctagct cctggctatg
     1021 gctccatccc ccaaacgctc ccgcgagcat atcggcttga agttttctgc gctcctcggc
     1081 ttcgccggct agtggctaga agctagcagc tcaggcgttg gcagttagta tccgtaatcc
     1141 gtttccgccg catacgcatg ctgcttcacc cgcaaatcat ccacgcgagt gctcccgagc
     1201 tctcgcccat aggcagcacg atcttcaacc cggtgaatcc actttgctgc ccactgctca
     1261 aagtctgctc gcgtcttcgt ttccgcgtga tactgctgaa aaaatgcatc atcccgcttg
     1321 taatacccct gcaccggcga tggatgggcg cccagcgggc attcaaccac cgctgaaacc
     1381 agaaagcccg gtattaccgt gcgattcggg tcgctggcta tcatctcttc atccacaatc
     1441 tcttccgcgc aaacgatcac ctttttggcc gcgcgcacgg cttcaatcat tacaccgaaa
     1501 ttcgcccagc aatgcgagtt gccgtgcttg tccgcgcgct gcagatgcac aatcgtcaca
     1561 tccggcacaa tcgcacgcac cgcaagcaga gtctctttcg gttcgaacgg agagatgatc
     1621 tggtaaaaaa agtggttccc cttcggcacg tcgctgccca tcgcggtacg cgtcggcagg
     1681 aacggcacac ccagcgcccc tgcctgcaga gccagcgcaa tcgagaagtt ggtcatgttg
     1741 aagacgcgca gcttctcacc cggtgtgccc ggattctcca cttcagtcgc atgccggaaa
     1801 ttgtaagccg agcccatcat cacgttcccg acccaggcag ctaccacgtc tcttacgcac
     1861 ccggccccga tcatctggtc gaacagaatg tcggaaatcg gcccaatcag ccgcagctcg
     1921 cgcttcttct gccggatgat ctcgtgtccg gcggcaaacg ggatcatttg ctccaactgg
     1981 aggcccaggg ccacgctgct gccatcggga atatggtcag cgattgccgc ccgcattgtg
     2041 gtgagtttcg ccatggtcgc agcagaccag tataaaggaa gctctcaccc aattactttc
     2101 gtcacagctt gcccgccgca caaacagact acaatccgca gatcatggcg agagcaaacc
     2161 tcccttcaac cctgtttttt atcttcatcg catcattttg catggcgcag agccaggacc
     2221 cacccaagtc tctcgccgag atcgctcgcc aggcgaaaaa tgaggcgggc aaggaacacg
     2281 ccaggatcgt gctcacggaa gactctccgc aagcagaaag gccgttgatc cctgacgttt
     2341 tctccggcgg gttcgacaac actgacgaaa tcctcaaatc gattgatagc taccggctca
     2401 gccacaatcc gaaggaaaca gaacaggtag tccgaatctg gtttgagaag catgatgcca
     2461 tgctggcctc cgcaattgag cagaacaggc aaatcgatca gcacgaaaag gaccggcaga
     2521 tgggctatct cgcaagcgac gctcagcccc gcagccagca ggaatacgtg gaggcacagc
     2581 gcattgagat catctctagg cgtgaagatt cgaaacgaaa acaggaaaac gggctgcttt
     2641 cagcgcgaat tcagcagaca tttactcgag tgcgtgcttc tctcgccggc aaaggcatga
     2701 aatacgagtg gttcaaaatc cgctgcggga acggaaactg cagctactaa gaacgcctca
     2761 gcacaccctg tcggcgtgtt actctttcac gccatatgaa aatcctgcgc cgcgtgcttc
     2821 tggtcctggt cgtcctggtg ctcgtagcct gggctttcgt tcccgggatc gtagaacggc
     2881 ggatgaacaa ggtactcaac ccaccgccgt atcatgcttc cgccgcggcg gaagcgctgc
     2941 ataaaaaact tctggtggcc gacctgcacg cggacagcct gctctggaaa cgcaacctgc
     3001 tggagcgcag cagccgcggt gaagtagacc tgccacgact tcaggacgga aacgtaggca
     3061 ttcaggcctt tacgctcgtc accaccagcc cgcgcggcct gaatatctac aagaactctg
     3121 acgatactga ccagatccag cttctcgcga tcgcgcaggg ctggccgccg cccacctgga
     3181 acagccccaa aatgcgtgcg ctttacgaag cctcgaagct gcagaggttc gccgaggact
     3241 cccaggggaa gctggtggta atcaagagca a
//
LOCUS       DASQYP010000349        11286 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_83673, whole genome shotgun sequence.
ACCESSION   DASQYP010000349 DASQYP010000000
VERSION     DASQYP010000349.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 11286)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11286)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11286
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_83673"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            268..1710
                     /locus_tag="VE783_11325"
     CDS             268..1710
                     /locus_tag="VE783_11325"
                     /inference="COORDINATES: protein motif:HMM:NF012398.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HYX54032.1"
                     /translation="MSAHTPVATSFGYLLNGRWITRGSVSEVRSPFTGEVVAEVIMAT
                     RHEAEEAIAAAQAAFAITRKLSSAERQRVLEKISAAIVARTEEFAHIMALEAGKPIRT
                     ARAEVGRAVFTFKVAAEESTRIYGEYLPLEGLETARGRWGLVRRFPLGPLAAITPFNF
                     PLNLVAHKIAPAIAAGCAMVLKPAMQTPVTALMLAKIVQESGWPAGALNVLPLSNDDA
                     APLVEDPRIKMLTFTGSGPVGWALKSRAGKKRVTLELGGNAAVVVHSDADLEYAADRC
                     VTVGFGYSGQSCISAQRILVHQPVYDRFLQMVLERVAKLKVGDPLNEATDIGPLIRES
                     DAVRVDAWINEATAAGATLRCGGKRKGSVVEPTILTNTNAHMKVNCQEVFAPVKTVEP
                     YSTYEEALTRVNDSAYGLQAGIFTADVRRIFQAFEELEVGGVMANEVPTWRADQMPYG
                     GVKESGLGREGLRYSIEEMTEPKLLVLDQR"
     gene            1916..4450
                     /locus_tag="VE783_11330"
     CDS             1916..4450
                     /locus_tag="VE783_11330"
                     /inference="COORDINATES: protein motif:HMM:NF013508.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SBBP repeat-containing protein"
                     /protein_id="HYX54033.1"
                     /translation="MSSARILPALTLFLAACFGFAVAQQQKTAPVTFPLAFEVNRGQT
                     APQVHYLARSREGMLFFTEDGVTVSVPQTGVVRMVFENSLTPLISGEDKLIARSNYLS
                     REPGKSISNVENFNAVRYSKLYPGIDVRFYGRERHLEHDFILSPGADANRISLRLDGI
                     GRARLLADGSVELMLGQRKLYESQPIAWQNVKGKKVAVAADWKIVGENRLGVTLGSYD
                     HNLPVTIDPVLAYSTHLGGTTGEDLDLQTTFPADTSIRHIGLDSSRNVYVGGSTSATD
                     FPTTAGAFDRTPNSQGIFHSDSTTQSGFVSKFDKTGRILIYSTFIRDFVDAMAVEPSG
                     HVYTSEAQFDEDPGPNFGSDEGFWLDKISLDGSHLLFSRLFAQTTSSASNCQAFSSSF
                     PSGLAVDNSGHAWVVGNTANPCLPASSGAFQKTMPNTNSTGFVVKFNTNVAPSSSVVF
                     STYLGGNNLDGAQAVTIDSSGNAYVAGTTQSSNFPHTAAFGTDTSTAVFVTKLNATGS
                     GLIFSTLLRGGGSGQGIFNGAGGIAVDASHNVYVGGITTSTTFPTTSGAFDRTFGGGT
                     CNTFGSGPCLDSFVSKISSGGGTLIYSTYLGGSGSDGISGLAINSAGMAFVTGSTTST
                     DFPTTPNAFKRTLPAGATNAFVTALQPNGSSLYYSTLLGGSHNTAAGAIAVDPAFNAW
                     VGGNTSDADYPVTADAFQPGLKGNSDGFIAKVVIAADLKVTLSSNVSSVAHNGNVILL
                     GNVANLGPDGSDNVVFTEPLAAGYQFQGVSTNATSCSKPAAGATSGTITCIKTRLENG
                     QTFFVNVFVKAIAASGHNITSTAKVSAKTQDLKTTNNTATRTVHVN"
     gene            complement(4535..6295)
                     /locus_tag="VE783_11335"
     CDS             complement(4535..6295)
                     /locus_tag="VE783_11335"
                     /inference="COORDINATES: protein motif:HMM:NF014794.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /protein_id="HYX54034.1"
                     /translation="MAKTAADVMIETLIDWGVDTIFGLPGDGINGIMESLRTHQEQIR
                     FVQVRHEEAAAFMACAYAKYTGRLGVCLATSGPGGIHLLNGLYDAKLDGQPVLAITGL
                     PFHDLNDTHTQQDVALDRVFMDVAAYSTRVMGPAHVENVTELACRVATTYRKVAHITF
                     PTDFQDMKASRKNASKRNTEGHVSLIHADSGHLPSEADLRRAAEILNTGGKIVILAGQ
                     GALHATDELEQTADKLGAPIVKALLGKAAVPDNSPFTTGGIGLLGTKPSQEAMESCDT
                     LLIVGSSFPYMEFLPKPGKAKAVQIDYDPIKIGLRYDVEVGLVGDSRRTLEGLLPLLT
                     RKQDRGFLEKAQKGMKNWNEMMLTRATNDAKPMKPQVIAHELGKRLRNDAIVSSDSGT
                     ITTWWARHVPAQRGQLYSCSGTLATMACGLPYTIAAQIAHPNRQCVAFVGDGGFTMLM
                     GELVTAVKYKLPIIVVVIKNNTLGQIKWEQMVFLGNPEFGVDLQPIDFVKYAEACGAV
                     GVRIDDPKECGALLDRALAANTAGPVVIEAVVDPFEAPMPAKVTLEQATKFAESLMRG
                     EPNRDKIVATTIADKVRELV"
     gene            6611..7309
                     /locus_tag="VE783_11340"
     CDS             6611..7309
                     /locus_tag="VE783_11340"
                     /inference="COORDINATES: protein motif:HMM:NF025875.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c3 family protein"
                     /protein_id="HYX54035.1"
                     /translation="MAQIFHRSANTLARASILGLVLLLSAVGAALMQLQRSPYVTNQH
                     IAPDQPIPFSHQHHVAGLGLDCRYCHTSVEESSFAGIPPTKTCMNCHAQLWTSAQLLE
                     PARYSYRTGKSLEWSRVHDLPDYVYFNHSIHIAKGVGCFSCHGPVDQMPLMYEENSLQ
                     MEWCLNCHRQPEKFLRPREEVFNMTYLQPDRDHPVTFEGRQYLSQVDLGTVLREKYHL
                     RTPQDITSCSTCHR"
     gene            7335..10445
                     /locus_tag="VE783_11345"
     CDS             7335..10445
                     /locus_tag="VE783_11345"
                     /inference="COORDINATES: protein motif:HMM:NF024247.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TAT-variant-translocated molybdopterin
                     oxidoreductase"
                     /protein_id="HYX54036.1"
                     /translation="MSNNSDSHPGLIPASEIKPASMELEAVRKKLADAKGPKYWRTME
                     ELVDQQAFGDLLEREFPRQASEWLDPVSRRGFLKLAGASLALAGLTGCTKQPLEQILP
                     YVRQPEELVPGRPIYYATAMPFNGHALPLLVETHEFRPTKVEGNPQHQASLGSADLFA
                     QASILDLYDPDRSVGVTYKGEPRPWGEFLGSIRGRVQYHKSNQGAGLRFLTGAVASPT
                     LGSQMRAVLQLFPQAKWHRWEPIHRDGIRQGSKAAFGNYYDPIYKFASADVVVSLDAD
                     FLSGSWFPGFLSYSRDFMSRRKDPKEGMNRLYVTESAPSTTGAKADHRLPARNSEIEK
                     IARALAAKVSAGGGGGEQLTPEQQKWVNSAAGDLTRSKGKCLVVPGVFQSASVFALAQ
                     AMNAALGNVGQTVTYIDPVEIDPVEHVQSIRELADDLRGGKVQTLVVMGGNPVFDAPA
                     DVQFKDALEKFASNQENQLIQLAFYRNDTTDFATWHVPEAHYLESWGDVRSYDGTVSI
                     VQPMIAPLFDGHTAGELVAIFTDQAGTSGHELVQSYWRSQHPGDDFESWWRRALHDGF
                     IANSAFTGRQVTAKAGALPAPAGQTGGVEIVFRPDPTIFDGTFVNNAWLQETPKPLSR
                     TTWDNIAFISPATAAQYGLLRLEKGTIAESDLEKNVNSDHQSDAQNVIEVNIGGRKVK
                     VPTWTQPGHPDGAITLFMGYGQKRTGRVGAGYGYDAYLVRPADAQYVANGSFELTREH
                     WNIAVQQGHFTMDTREPVKRANLEEYEKNQNFAHENKDEEPAENDTLYPDYRKSGWYQ
                     QHAWAMAIDLNSCIGCQACTVACYAENNISVVGKEQVQRGREMLWLRIDAYYEGDPAN
                     PTVHFQPVPCMQCENAPCEPVCPVGATVHSTEGLNDMVYNRCVGTRYCSNNCPYKVRR
                     FNFMLYADYETPIKKLGRNPDVTVRSRGVMEKCTYCVQRINAARITAEKEDRRVRDGE
                     VKTACQQSCPTEAIYFGDMNDPSSKVAKWKNDSRNYAMLAELNTRPRTTYIAAVKNPN
                     PEFEKA"
     gene            10449..>11286
                     /gene="nrfD"
                     /locus_tag="VE783_11350"
     CDS             10449..>11286
                     /gene="nrfD"
                     /locus_tag="VE783_11350"
                     /inference="COORDINATES: protein motif:HMM:NF015851.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NrfD/PsrC family molybdoenzyme membrane anchor
                     subunit"
                     /protein_id="HYX54037.1"
                     /translation="MAPQVQDEIDVLPPKGVRPPVIGPGQTLRTVTDRIGGVVLQKHT
                     PVFWLLIVALAVAITGMLNTAIGYLLMKGVGIWGINIPVGWGFAIVNFVWWIGIGHAG
                     TLISAILLLFKQTWRTSINRFAEAMTIFAVMQAGLFPLIHTGRPWLAAYWLFPIPLTM
                     GVWPQFRSPLIWDVFAVSTYFTASFLFWGIGLIPDFATLRDSAKTLVVRRIYGMLAMG
                     WRGSAKHWNRYETAYMLLAGLCTPLVLSVHSVVSLDFAVSVVPGWHTTFFPPYFVAGA
                     IYS"
BASE COUNT         2389 a         3329 c         3193 g         2375 t
ORIGIN      
        1 gcgctcaaga actacggaca agacagcagc gcgccgcacg ccaaagacgc gtccaatctg
       61 agcagccaga tcaactctgc cgcagcgaag gtaaagagtg atcacaccat ggccacccag
      121 aacattgata agtggtggaa ccagatcgcc gattggacag gacagaagtc cagttgacaa
      181 ccggattgag gcgactccgc tcctcgagcg gagtgcgccc catcctgctg cgttgaactg
      241 aactagggct ggtgaaacaa tgaattcatg tcagcgcata caccagtggc aacctcattc
      301 ggctatctgt tgaacggaag atggattacc cgcggttcgg tttcggaagt caggtcgcct
      361 ttcaccggag aggttgtggc tgaggtgatc atggcgacgc ggcatgaagc tgaagaagcc
      421 attgccgccg cgcaggcggc gttcgccatc actcggaagc tctccagtgc agaacgccag
      481 cgcgtgcttg aaaaaatctc agccgcaatc gtcgcgcgga ccgaagagtt tgctcacatc
      541 atggcactgg aggcgggcaa gcccattcga accgcgcgcg ctgaagttgg acgggcggtg
      601 ttcaccttca aagtcgccgc cgaagagagc acccggattt atggcgagta cttgccgctg
      661 gagggacttg agactgcccg ggggcgctgg ggattagtgc gccgctttcc gctcggaccc
      721 ctcgcggcga tcacgccgtt caatttcccg ctcaatctgg tcgcccacaa aattgctccc
      781 gccatcgctg ccggatgcgc catggtcttg aaacccgcga tgcaaactcc ggtcacggca
      841 ctcatgctcg ccaagatcgt tcaggagtca ggctggccgg ccggtgcact caacgtgctg
      901 ccactgagca atgacgatgc cgcgccgctg gtggaagatc cacgcatcaa aatgctgacc
      961 ttcacgggca gtggacccgt gggatgggcc ctgaagtcaa gggcaggtaa gaaacgcgtg
     1021 acgctcgagc tcggcggcaa cgccgcggtg gtggttcaca gcgatgccga ccttgaatat
     1081 gcggccgacc gctgcgtcac cgttggcttc ggctactccg gccagagctg catctcggct
     1141 cagcgaatcc tggttcacca gccggtttac gatcgtttct tgcagatggt gcttgagcgc
     1201 gtcgcgaagc tcaaagttgg cgatcctctg aatgaagcca ccgatatcgg tccactcatc
     1261 cgcgaatcgg acgcggtgcg cgtagatgcc tggatcaatg aagcgactgc agccggcgct
     1321 actctgcgtt gcggcggcaa acgcaaaggc tccgtcgtgg agccgaccat cctcaccaac
     1381 acaaatgctc atatgaaagt caactgccag gaggtgtttg cgccggtgaa aaccgtggag
     1441 ccctattcca cttacgagga agctctgacc cgcgtgaacg attctgctta cggacttcaa
     1501 gccggcattt ttaccgcaga cgtgcgtcgg attttccagg cgtttgaaga actagaggta
     1561 ggcggcgtga tggccaatga ggttcccaca tggcgcgccg accagatgcc ctacggcggt
     1621 gtgaaggagt ccggactcgg acgcgaaggg ctacgctact caatcgaaga aatgaccgaa
     1681 cctaagttgc tggtgctgga ccagcgctag ttaatcttcg cgggtgatta aaaaattcac
     1741 atctgtttaa aactgcttcc cagagctgcg ggttaaggca aaatattttc ggcttcctct
     1801 ctgcccgttc gggccaccac tggcaacatc ggctgcggca gcttacatct ttcccagcag
     1861 cacacccaag accggacccc ctgtacggaa tcaagtgctt gttcacagga gaactatgtc
     1921 aagcgcccgc atattaccag ctctcacctt gtttcttgca gcctgtttcg gattcgccgt
     1981 cgcgcagcaa caaaaaaccg cgccggtcac attcccgctc gcctttgaag tcaaccgcgg
     2041 acagaccgcg ccacaggtcc actaccttgc ccgcagccgt gaaggcatgc tgttcttcac
     2101 cgaggatggc gtgaccgttt ccgtgccgca gaccggcgtg gtgcgcatgg tgtttgaaaa
     2161 ctcgttgacg ccgctgatca gcggcgaaga caagttgatt gcacgcagta actatctttc
     2221 tcgtgaaccg ggtaaatcga tcagcaacgt agagaatttc aatgctgtgc gatactcgaa
     2281 gctctatccc ggaatcgacg tcaggttcta cggacgcgag cggcatctgg aacatgactt
     2341 tattctctcg cccggggccg acgccaatcg catctcgttg cggctcgatg gaatagggcg
     2401 cgctcgtttg ctggccgacg gatcagtgga gcttatgctt ggtcaacgca agctctatga
     2461 gtctcagcca atcgcgtggc aaaacgtgaa gggcaaaaag gtagcggttg ccgcggattg
     2521 gaagatagtg ggcgaaaatc gtctcggtgt gacgctcggc agctatgatc acaacctgcc
     2581 cgtcaccatc gatcctgtgc ttgcctattc gactcatttg ggtggaacca ccggtgaaga
     2641 tctggacctg cagactacct tcccggcaga tacatccatc cggcatatcg gacttgactc
     2701 ttcgcgcaat gtctatgtcg gcggaagcac atcagcaaca gatttcccaa ccacagccgg
     2761 agcgttcgat cgcaccccga actcccaggg aatcttccat tccgattcca caacccagag
     2821 cggcttcgtc tccaagttcg acaagaccgg gcgcatcttg atctactcca ccttcatacg
     2881 tgatttcgta gacgccatgg cggtggaacc gtcgggtcac gtttacacat ctgaagcgca
     2941 gttcgacgaa gacccaggcc cgaacttcgg ctctgacgag ggattctggc tggacaagat
     3001 cagtctggac ggctcgcatc ttctgttctc acgtctgttc gcacagacca ccagcagcgc
     3061 cagcaactgc caggcttttt ccagctcttt cccaagcggc ctcgcggtag ataactccgg
     3121 tcacgcatgg gtcgttggca atacagccaa cccatgcctg cccgccagct ccggtgcttt
     3181 tcagaaaaca atgccgaaca cgaactccac cggctttgtg gtgaagttca ataccaatgt
     3241 cgcgccatcc agttcggtgg tgttcagcac atatctcggc ggcaacaatc ttgatggcgc
     3301 gcaggcggtc accattgatt cctccggtaa cgcctacgtg gccggaacca cacaatccag
     3361 caacttcccg cacacagcag cgtttggaac tgacaccagc acggccgtct tcgtcaccaa
     3421 actcaacgcc accggctccg gcctgatctt ctccaccttg ttgcgtggcg gtggctcagg
     3481 gcagggaatc tttaacggag cgggaggaat cgccgtcgat gcctcgcata acgtctacgt
     3541 gggcggaatc acaacctcca ccacattccc aacaacttca ggggccttcg accgtacctt
     3601 cggtggcggg acctgcaaca ccttcggcag cgggccgtgc ctggacagtt tcgtctcaaa
     3661 gatcagctcc ggcggtggca cgctgatcta ttccacttat ctcggcggca gcggcagcga
     3721 cggaatatcc gggctggcga tcaacagcgc aggcatggca tttgtaaccg gtagcactac
     3781 gtcaaccgat tttccaacca cgccgaacgc tttcaagaga actcttccgg cgggagcgac
     3841 gaatgctttt gttaccgcgc tgcagcctaa cggcagctct ctttattact ccacgttgct
     3901 tggtggcagt cacaacactg ctgcgggagc catcgcggtg gatccagcat tcaatgcctg
     3961 ggtgggcggc aatacttctg acgccgacta ccctgtaacc gctgatgcgt ttcagcctgg
     4021 cctgaagggg aactcggatg gtttcatcgc gaaggtggtc attgccgctg atctaaaggt
     4081 cactctgagc agcaacgttt ccagcgttgc tcataatggg aacgtcatcc tgttaggtaa
     4141 cgtggccaac ctgggacctg atggaagtga caacgtggta tttacagagc ccctggctgc
     4201 tggatatcag ttccagggcg tctcaacaaa cgcaacctca tgttcaaaac ccgcagcggg
     4261 agccaccagt ggaacgatta cttgcatcaa gaccagactg gagaacggcc agactttctt
     4321 tgtaaatgtt ttcgtgaaag ctatcgccgc ctccggacac aacatcacca gcacagccaa
     4381 ggtcagcgca aaaacgcaag acctgaaaac caccaataac acagcgaccc gaacggtcca
     4441 cgtgaactga acttaggtca ggcaaaaact gaaagcggcc tcatcaaggg gccgctttct
     4501 tttgagtcgt tggtgtcgat ggcggaactg ccggctaaac cagctctctg actttgtctg
     4561 cgatcgttgt ggccacgatc ttgtctcgat tcggctcacc cctcatgagc gactcggcaa
     4621 acttggtcgc ctgctccagc gtgaccttcg ccggcatggg ggcttcaaac ggatccacca
     4681 cggcttcaat caccaccggg ccggcggtat tggcagccag agcgcggtcc agcagcgcgc
     4741 cgcattcttt ggggtcgtca attcgcacac ccaccgcccc gcatgcctcc gcgtatttga
     4801 cgaagtcaat cggctgtaaa tcaacgccga attccggatt tccgagaaaa accatctgct
     4861 cccacttgat ctggccgagg gtgttgttct tgatgaccac aacgatgatc ggcagcttgt
     4921 atttcaccgc cgtaaccaac tcgcccatga gcatggtgaa acctccgtca ccaacaaagg
     4981 caacgcactg ccggttcggg tgcgcaatct gcgcggcaat agtgtatgga agcccacacg
     5041 ccattgtggc cagcgtgccg gaacaggagt agagctgacc ccgctgcgcc gggacgtgcc
     5101 gtgcccacca tgtagtgatg gtgccgctgt ccgagctgac aatcgcatca ttgcgcagcc
     5161 gctttccaag ttcatgtgcg atgacctgcg gcttcatcgg cttcgcatcg ttggttgcgc
     5221 gggtaagcat catctcgttc cagttcttca tgcctttctg cgctttttcc aggaagccgc
     5281 ggtcctgctt gcgcgtgagc agaggcagga gcccctccag ggtccgacgg ctgtcgccta
     5341 ccaaccccac ttccacgtca tagcgcagcc cgattttgat cgggtcatag tcaatctgca
     5401 ccgctttggc ttttcccggc ttgggaagaa attccatgta ggggaatgac gaaccgacga
     5461 tgaggagggt gtcgcagctt tccatcgcct cctgcgatgg cttggttcca agcagtccaa
     5521 tcccgcctgt ggtaaacggg ctattgtcag gaacggccgc cttgcccagc agcgccttta
     5581 cgattggcgc gcccagttta tcggcggttt gctccagttc gtcggttgcg tgcagtgcgc
     5641 cctgacctgc caggatcaca atcttcccgc cggtattgag aatctcagcc gcgcggcgca
     5701 ggtccgcttc gctgggcagg tgcccactat cggcatggat gagcgaaacg tgtccctctg
     5761 tgttgcgctt cgaagcgttc ttacggctgg ccttcatatc ctgaaagtca gtagggaagg
     5821 tgatgtgcgc cacctttcta tatgtggttg ccacgcgaca ggccagctcc gtcacgtttt
     5881 ccacgtgggc cggacccatg acgcgagtac tgtaggcggc cacgtccata aatacacgat
     5941 cgagcgccac gtcctgctgc gtgtgcgtgt cattcagatc gtgaaaaggc aaaccagtaa
     6001 tcgccaatac cggctgaccg tcgagcttgg catcgtacaa accgtttaga aggtggattc
     6061 cccccggccc ggacgttgcc aggcagacgc cgagtctgcc cgtgtactta gcataggcgc
     6121 acgccatgaa ggcggcagct tcttcgtgcc gcacctgcac aaaccgtatc tgctcctggt
     6181 gcgtgcgtag cgattccatg attccgttga ttccatcacc cggcagacca aaaatcgtat
     6241 cgacgcccca atcgatcagg gtttcaatca ttacgtcagc ggcagtcttc gccataaaag
     6301 aaaatttctc ctcatcatca atcactcttt taagtaggat gccaacggta tttgagctgg
     6361 ttttcgagca agcgaagggc gcgagagctg ctcaccgact tgcagcagct tgcgacgggg
     6421 cagcgccaat cgacgccaag aaactttttt gcaactttcc gaagctcagg ctagctgaat
     6481 tgccgttcgt ctgtttataa tcatccgttt catcgcaggc tcctgcagtc tgctggtgac
     6541 tcggggaaac cgcccctcca gtgccttgag taagcgctgc gggtgagctt ttcgccggga
     6601 ctaatattcc atggcacaga tttttcaccg cagtgcaaac acactggccc gcgccagcat
     6661 cctgggcttg gtccttctac tttccgcggt aggcgcggcg ctcatgcagt tgcagcgctc
     6721 gccttatgtc accaaccagc acattgcgcc ggaccagccg attccattca gccatcagca
     6781 ccatgtggcc gggctcggtc ttgactgccg ctactgccat acttcagtag aagaatccag
     6841 cttcgccggg attcccccca ccaagacctg catgaactgc catgcgcagc tctggaccag
     6901 cgcgcagctt ctggaaccgg cgcgctacag ctataggacc ggaaagtctc tggagtggag
     6961 ccgcgttcac gacctgcctg attacgttta tttcaatcac agcattcaca ttgccaaggg
     7021 agttggttgc ttcagctgtc atggtccggt tgaccagatg ccgctgatgt atgaagagaa
     7081 ctccctgcag atggaatggt gcctgaactg ccatcgccaa ccggagaagt tcctgcggcc
     7141 gcgcgaggaa gttttcaaca tgacgtatct gcagccggac cgcgatcacc cggtgacgtt
     7201 tgaaggcagg cagtacctga gccaggttga ccttggcacg gtgctccgcg aaaaatatca
     7261 cctgcgcacg ccgcaggaca ttaccagttg ctccacctgc caccgctaag tggcggaaat
     7321 aaaaacggaa gcgaatgtcg aataacagcg attcacatcc tggactgatt cccgcaagcg
     7381 agatcaagcc ggccagcatg gagctggaag cggtgcgcaa gaagcttgcc gatgccaaag
     7441 gcccaaaata ctggcgcacc atggaagaac tggtggacca gcaggcgttc ggcgacctgc
     7501 ttgagcgcga gtttccccgc caggcatccg aatggcttga cccggtttcg cgccgcggct
     7561 tcctcaagct tgcaggcgca tcgctggctt tggccgggct caccggatgc accaagcagc
     7621 cgctggagca gattcttcct tatgtccgcc agcctgaaga gctggttccc gggcggccta
     7681 tttattacgc caccgcgatg ccgttcaacg ggcacgcgct gccgcttctg gtggaaaccc
     7741 atgaattccg acccaccaag gtggaaggca atcctcagca tcaggcaagt cttggctccg
     7801 cagacctctt tgcgcaggcc tccattctgg atctgtatga cccagaccgg tcggttggag
     7861 tcacatataa aggagagccg cggccctggg gagaattcct gggatcgatc cgtggacggg
     7921 ttcagtacca caagtccaat cagggtgcgg gactgcgctt ccttacgggc gcggtcgctt
     7981 cgccaacgct cggttcgcag atgcgcgcgg tgctgcagct tttcccgcag gcgaagtggc
     8041 atcgctggga gccaatccac cgcgacggta tccggcaggg ttcaaaggcg gcttttggga
     8101 attactacga cccgatctac aagtttgcgt cagcggatgt tgttgtttcg ctcgatgcag
     8161 acttcctctc gggctcgtgg ttcccgggct ttctctcgta ttcgcgcgac ttcatgagtc
     8221 gccgcaaaga tcccaaagag ggcatgaacc ggctttatgt gaccgagtct gcgccatcca
     8281 ctacgggcgc caaggcggat catcgtcttc ccgcgcggaa ctcggagatt gaaaagattg
     8341 ctcgtgctct tgctgccaag gttagcgcag gtggtggagg cggagagcaa ctcactcccg
     8401 aacagcagaa gtgggtgaac tccgcggctg gggatctcac caggagtaaa ggcaagtgtc
     8461 tcgttgtgcc gggtgtcttc cagagcgctt cagtgttcgc cttggcgcag gcgatgaacg
     8521 ccgcgctggg caatgtcggc cagaccgtca cctacattga tcctgtcgaa atcgatccgg
     8581 tcgagcacgt gcagtcgatt cgcgaactgg ctgatgattt gcgcggcggc aaagttcaaa
     8641 cgctcgtcgt gatgggcgga aatcccgtat ttgacgcgcc tgccgacgtt cagttcaaag
     8701 acgcactgga aaagttcgct tccaatcagg aaaaccagct gatccagctg gcgttctatc
     8761 gcaacgacac cacggatttt gctacgtggc atgttccgga agcgcactat ctggaatcct
     8821 ggggtgatgt ccgctcttac gatgggaccg tcagcatcgt ccagccgatg attgcgccgc
     8881 tcttcgatgg ccacacggca ggcgagttgg ttgctatctt taccgatcag gccggcacgt
     8941 caggccacga gcttgttcaa agctactggc gctcccagca cccgggggac gatttcgaga
     9001 gctggtggcg tcgcgcgctg catgacggct ttattgctaa cagtgctttc acgggccgtc
     9061 aggtaaccgc gaaggccgga gccttgcctg ctcccgccgg acagactggt ggggtggaga
     9121 ttgttttccg tcccgatccc acgatcttcg atggcacgtt tgttaacaac gcgtggctgc
     9181 aggagacgcc taagccgctg agccgcacaa cctgggacaa catcgcgttc atcagcccgg
     9241 caaccgcggc gcagtatggt ctgcttcggc tcgaaaaggg caccatcgcc gaatcggacc
     9301 tggagaaaaa cgtcaatagc gatcaccagt ccgatgctca gaatgttatt gaagtgaaca
     9361 tcggcggtcg caaggtcaag gtgcccacct ggactcagcc cggccatccg gacggagcca
     9421 tcacgctgtt catggggtac ggacaaaagc gcaccggaag agtaggagcc ggctatggat
     9481 atgacgctta tttggttcgg ccggcggacg cgcagtatgt agcaaatggc tcctttgagc
     9541 tcaccaggga gcattggaat atcgcggtcc agcaaggtca tttcaccatg gacacgcgcg
     9601 agccggtgaa gcgagccaat cttgaagagt acgaaaagaa ccagaatttc gcgcacgaaa
     9661 acaaggatga agagccggca gagaacgaca ctctctatcc cgattaccgc aaaagcggct
     9721 ggtatcagca gcacgcgtgg gcaatggcga ttgatctgaa ctcctgcatc ggctgccagg
     9781 cgtgcaccgt ggcctgctat gcagagaaca acatttcagt cgtgggtaaa gagcaggtgc
     9841 agcgcggccg cgaaatgctc tggctgcgta ttgatgctta ctacgaaggt gatccggcga
     9901 atcccacagt tcattttcag ccggtaccat gcatgcagtg cgagaacgcg ccctgcgagc
     9961 cggtctgccc ggtgggagcc acggtccaca gcacggaagg cctgaatgac atggtctata
    10021 accgctgcgt gggaactcgt tattgctcca ataactgtcc ttataaggtg cggcggttta
    10081 atttcatgct gtacgcggat tacgaaacac cgatcaagaa gctgggccgc aaccctgacg
    10141 ttacggtgcg aagccgcggc gtgatggaaa agtgcaccta ttgcgtgcag cgcatcaatg
    10201 cagcgcgcat taccgcggag aaggaagacc gccgcgtgcg tgatggcgaa gtgaagactg
    10261 cctgccagca gtcgtgcccg acggaggcga tctatttcgg cgacatgaat gatccgagta
    10321 gcaaggtcgc gaaatggaaa aacgactcgc gcaattacgc aatgctggcg gagctgaaca
    10381 cacgcccgcg gaccacgtac attgcggccg tcaaaaatcc caaccccgaa tttgagaagg
    10441 cgtagcgaat ggctccacag gtccaagacg aaattgatgt actgccgccg aaaggcgtaa
    10501 ggccgccagt tattggcccc ggccagacgc tgcgcacggt cacggaccga atcggcggcg
    10561 tggtgctgca gaagcacacc ccggtgttct ggctgttgat tgtcgcgctc gcggtggcaa
    10621 tcactggcat gctgaacacg gcgattggct atttgctgat gaaaggcgtc ggcatttggg
    10681 gtatcaacat cccggtcggc tggggctttg cgatcgtcaa cttcgtgtgg tggatcggta
    10741 tcggccacgc gggcacgctg atctccgcca ttttgttgct gttcaagcag acctggcgta
    10801 cctcgatcaa ccgctttgcc gaggccatga caatttttgc cgtcatgcag gccggcttgt
    10861 tcccgctgat tcataccggg cgtccgtggc tggcggctta ctggctgttt cctatcccgc
    10921 tcacgatggg agtatggccg cagttccgca gcccgctgat ctgggacgtg ttcgccgtat
    10981 cgacatactt caccgcgtcg ttcctgttct ggggcatcgg gctcattcct gacttcgcca
    11041 cgctgcgcga ttccgccaag acgctggtcg tccggcgcat ctacggcatg ttggcgatgg
    11101 gctggcgcgg ctcggccaaa cactggaacc gctatgagac cgcgtacatg cttctggccg
    11161 gtctctgcac cccgctggta ctttcagtgc atagcgtggt gtcgctggat ttcgcggtat
    11221 cggttgtgcc tggatggcac accacattct tcccgccata ctttgttgcg ggtgcaattt
    11281 attccg
//
LOCUS       DASQYP010000350         2010 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_97520, whole genome shotgun sequence.
ACCESSION   DASQYP010000350 DASQYP010000000
VERSION     DASQYP010000350.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 2010)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2010)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2010
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_97520"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1258
                     /locus_tag="VE783_11355"
     CDS             <1..1258
                     /locus_tag="VE783_11355"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX54038.1"
                     /translation="SKQPVYSEPQPGRALLYVARPAHARMISMPDFKIFVDDKPAGWL
                     PKRCYLAVQVEPGRRLLWGPSPNESERYDFEAGKTYLLVLEEVYKRANANAYLDTSRW
                     IKADPAAFKELVSAGKLEYVTASAQAMAELGKDASRKYAKINEKTRDIAGPSNLPATF
                     ENVWYRPEKKKVLFKGYEASGTLTINADTLEYKSEKKNLSVPLKSLISISQGSFNTFG
                     DDAPWDIVVFTTDAGEEVAAFRDGRSVSAGGATGLILRTLAAAAQRTQKTSVTEAQAS
                     ATAGDPNPTAAQPRTGEAGQAPAASPASSSAAPQGSTLASPVLQHDTLSTISSMDEAM
                     ASECKAPRRILHMEVTAKPSGVKMKHERMVAGWWGERWILDRCGAEVSYDITFTSDGH
                     GGTNINFKTSPAVEQPGKAEAAAPPP"
     gene            1434..1838
                     /locus_tag="VE783_11360"
     CDS             1434..1838
                     /locus_tag="VE783_11360"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX54039.1"
                     /translation="MRPESKLCLRYRVVLCGVLFAVSVVSQSQISESPEQYISRLVRE
                     ANGQQHRTGGAPVLHAFIRSRHLPQSKETSFLAATAHYTETQRSRAGAAGMGHDDGFH
                     DGTGPINEADVGAATELIFIDQPSARTFFQGS"
BASE COUNT          456 a          537 c          611 g          406 t
ORIGIN      
        1 gagcaagcag ccggtttatt cggagcccca acctggccgg gcgttgcttt atgtggctcg
       61 gccagcccat gcgcgcatga tttcgatgcc cgatttcaag atttttgttg atgacaagcc
      121 agcaggatgg ttgccgaagc gctgctatct tgccgtgcaa gtggagcccg ggcgccgtct
      181 gctgtggggg ccttcaccga atgaatccga gaggtacgat tttgaggccg gtaagacgta
      241 cctgctcgtg ctggaggagg tttacaagcg ggcgaacgca aatgcatatc tggatacctc
      301 ccgctggatc aaagccgacc ctgccgcttt caaggagctg gtttctgccg gcaagctgga
      361 atatgtgacc gcatcagcac aggcgatggc cgaactgggc aaagatgcct cccggaaata
      421 tgccaagatc aacgagaaga cacgcgatat tgccggccct tccaacctgc cagcgacatt
      481 tgaaaacgtg tggtatcgtc ccgagaagaa gaaggtcctg ttcaaaggct atgaagccag
      541 tgggacgctc accatcaatg cggacaccct cgagtacaag agcgaaaaga agaacctatc
      601 cgttcccctg aaaagcctga tcagcatcag ccagggatcg tttaatacgt ttggcgacga
      661 cgcaccgtgg gacatcgtgg tatttaccac cgatgccggc gaagaagtgg ctgcctttcg
      721 cgatggccgc tctgtgagcg caggcggggc aaccgggctg attctgcgca cgctggcggc
      781 ggcagcacaa cggacgcaga agacttctgt aacggaagcg caggcttcgg ccaccgctgg
      841 tgatccgaat ccaacagccg cgcagccgag gaccggcgag gccggccagg cgccggctgc
      901 ttcgcctgct tcatcctctg ctgctccgca aggatcaacg ctggcttcac cggtgcttca
      961 gcacgacacg ctcagcacta tttcttccat ggacgaagcc atggcctcag agtgcaaggc
     1021 gccaaggcga atcctgcaca tggaagttac cgccaaacct tccggcgtga agatgaagca
     1081 tgagcgtatg gtggcgggct ggtggggaga acgctggatc ctcgatcgct gcggcgcgga
     1141 agtctcctat gacattacgt ttacctcaga cggacatggt ggaaccaaca tcaatttcaa
     1201 gaccagtccg gctgtggagc agccggggaa agcggaagct gcggccccgc cgccatagca
     1261 gatgatggcg gggcgaccca ccccgcggat gagaattacc aaatgagaag catctagctg
     1321 ctggctgcga gcttgaggcg tttggatcca atgcccggat gtatatcttt tctgttcagt
     1381 cgtacgatgt atatcttttc tgttcagtcg tactttgata taagttccag cctatgagac
     1441 ccgagtcaaa gctttgcttg cgctaccggg ttgtgctgtg cggagttctg tttgccgttt
     1501 ctgtggtgag ccaatcgcaa atcagtgaat cgccggagca gtacatcagc cggctggttc
     1561 gagaggcgaa tggccagcag caccgcacag gaggggcgcc tgtgctacac gcttttataa
     1621 gatcgcgaca tttacctcag agcaaggaaa ccagcttctt agcggcaacg gcgcactaca
     1681 cggaaacgca gcgatcacgc gctggggcag ccggtatggg gcacgatgat ggattccatg
     1741 atggcaccgg acccatcaat gaggccgatg tgggcgccgc gacggaactg atatttattg
     1801 accagccgtc agcacggacg ttttttcagg gcagttgagc gcagataggc gctgatggga
     1861 aagagattgc caggcgtgcc aaaactgcca aagaagtatg attgcacagc ccggggatag
     1921 cttcgttctg gatagaaggg tggatcgatg gtaaggctag acagcgttat tcaggcatgc
     1981 acaacggtgc tttgctgcgg agtggtcacg
//
LOCUS       DASQYP010000351         5710 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_56242, whole genome shotgun sequence.
ACCESSION   DASQYP010000351 DASQYP010000000
VERSION     DASQYP010000351.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 5710)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5710)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5710
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_56242"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..492)
                     /gene="rpsE"
                     /locus_tag="VE783_11365"
     CDS             complement(<1..492)
                     /gene="rpsE"
                     /locus_tag="VE783_11365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004074875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000312 - plastid small ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S5"
                     /protein_id="HYX54040.1"
                     /translation="MATTAIRKKLDAGGYNLKDQVVAINRVTKVVKGGKNMSFAALVV
                     VGDPSAGVVGYGSGKAKEVPQAIRKGIESAKKNLVKVNLTQTSIPHQVLGKYASSQVL
                     LKPAPEGTGVIAGGAVRAVMTSAGVQNVLTKSIGTANPHNVIKATFDALNRLRDKQEV
                     ATMR"
     gene            complement(493..861)
                     /gene="rplR"
                     /locus_tag="VE783_11370"
     CDS             complement(493..861)
                     /gene="rplR"
                     /locus_tag="VE783_11370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015302640.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L18"
                     /protein_id="HYX54041.1"
                     /translation="MIPNISKDSIRRRIHDRLRQRMTGSAERPRLNVYRSLNHIYAQL
                     IDDGSGATLVSASTVQGRKKGDKKTGGNVASAKEVGKLIAERAKEKGIKKVVFDRGGY
                     LYHGRIKALADAAREAGLEF"
     gene            complement(1029..1568)
                     /gene="rplF"
                     /locus_tag="VE783_11375"
     CDS             complement(1029..1568)
                     /gene="rplF"
                     /locus_tag="VE783_11375"
                     /inference="COORDINATES: protein motif:HMM:TIGR03654.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_function: GO:0019843 - rRNA binding [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L6"
                     /protein_id="HYX54042.1"
                     /translation="MSRIGKKPIPLPSGVKFEVKGNTVVVNGPKGQVQTHLPAGVKLQ
                     TQDGHINVTRENDDFAAVHGLARALVNNAVEGVTKGWNKDIEIVGIGYRAELKGKNTV
                     VFTLGYSHPIEYPLPTGVTVAIDPKQTKLTVSGIDRQKVGQVAAEMRQLRPPDPYKQK
                     GVRYAGERLKKKVGKTGAK"
     gene            complement(1697..2095)
                     /gene="rpsH"
                     /locus_tag="VE783_11380"
     CDS             complement(1697..2095)
                     /gene="rpsH"
                     /locus_tag="VE783_11380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002857494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S8"
                     /protein_id="HYX54043.1"
                     /translation="MSLTDPVADLLARIRNAIHARHQKLDVPASKLKLEIARILKEEG
                     YVANFKATEEDGRKVLRIYLKYGNDNAAAISNLQRVSRPGCRVYVGRNEIPRVLGGLG
                     INILTTPKGVMTGRQARKEGVGGELLCEVW"
     gene            complement(2289..2474)
                     /locus_tag="VE783_11385"
     CDS             complement(2289..2474)
                     /locus_tag="VE783_11385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003948630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type Z 30S ribosomal protein S14"
                     /protein_id="HYX54044.1"
                     /translation="MATTGKIAKTNKKPKFSTQHRNRCSICGRPRAYLRKFGLCRLCF
                     RGLALKGEIPGVSKSSW"
     gene            complement(2536..3099)
                     /gene="rplE"
                     /locus_tag="VE783_11390"
     CDS             complement(2536..3099)
                     /gene="rplE"
                     /locus_tag="VE783_11390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018376779.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L5"
                     /protein_id="HYX54045.1"
                     /translation="MATAKTKTNARLRERFHKEIAPALAKELGLTNPMAVPRLHKVVV
                     NMGVGEATQNTKMLDPLVRDLGEITGQKPVVTKAKKSIAAFKVREGMSIGAMVTLRGD
                     RMYEFLDRLINIALPRVRDFRGVSTKSFDGRGNYTLGLRDQLIFPEIDYAKVDKLKGM
                     NVTIVTTARDDNQARALLKHLGMPFRQ"
     gene            complement(3265..3588)
                     /gene="rplX"
                     /locus_tag="VE783_11395"
     CDS             complement(3265..3588)
                     /gene="rplX"
                     /locus_tag="VE783_11395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009607843.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L24"
                     /protein_id="HYX54046.1"
                     /translation="MHTRIDIKRNDQVKVITGRDKGKQGRVLRVFPEKGTVLVEHVMM
                     VKKNVRPNPQRNIKGGIAEQESPISISNVMVVCPSCGPSRVGHHREGGKSVRICRRCD
                     AALDK"
     gene            complement(3613..3984)
                     /gene="rplN"
                     /locus_tag="VE783_11400"
     CDS             complement(3613..3984)
                     /gene="rplN"
                     /locus_tag="VE783_11400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005501250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L14"
                     /protein_id="HYX54047.1"
                     /translation="MAVMMRTILDVADNSGARRLQMILPLGGHTGLNAGLGDVVTAAV
                     KEAAPDGTAKKGSVVKCVIVRQRKEHRRRDGTYIRFDQNAAVLINDAGEPVGTRVFGP
                     VARELREKKFLKIVSLAPEVL"
     gene            complement(4210..4524)
                     /gene="rpsQ"
                     /locus_tag="VE783_11405"
     CDS             complement(4210..4524)
                     /gene="rpsQ"
                     /locus_tag="VE783_11405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011983253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S17"
                     /protein_id="HYX54048.1"
                     /translation="MAETTATTEKKQGRRATKIGEVVSTKMAKTIVVQVSMKKAHPLY
                     RRVIAKAKKFYAHDEKNTARVGDFVEIEETRPLSKLKRWKLKSVIRKAKLVAGEEQQA
                     AS"
     gene            complement(4525..4878)
                     /gene="rpmC"
                     /locus_tag="VE783_11410"
     CDS             complement(4525..4878)
                     /gene="rpmC"
                     /locus_tag="VE783_11410"
                     /inference="COORDINATES: protein motif:HMM:NF013027.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L29"
                     /protein_id="HYX54049.1"
                     /translation="MDAEKLRNLTDNELQHQQQELNDQLFRLKFQMKMGQTESLNKVR
                     GLRKDVARIQTIIREKELGLNGDKAAATEGATPAEKKAAAPAKKAGKKKAAKKKSPAK
                     KAAAKKSSGAKARKK"
     gene            complement(4992..5411)
                     /gene="rplP"
                     /locus_tag="VE783_11415"
     CDS             complement(4992..5411)
                     /gene="rplP"
                     /locus_tag="VE783_11415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002633601.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L16"
                     /protein_id="HYX54050.1"
                     /translation="MLMPKKVKYRKQQRGRMRGKAWRGSELSFGEYGLKVLEPGWITD
                     RQIEACRVAMTRFIKRNGKIWVRLFPDKPVTKKPAETRMGKGKGAPDHWVAVVRPGKV
                     LFEMEGVSRTDAMEAMRLASHKLPLRTKFVGRHEATA"
     gene            complement(5547..>5710)
                     /locus_tag="VE783_11420"
     CDS             complement(5547..>5710)
                     /locus_tag="VE783_11420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016293501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="30S ribosomal protein S3"
                     /protein_id="HYX54051.1"
                     /translation="GRLPLHTLRADIEYGFSEARTTYGVIGVKVWIYRGDILPQKKRT
                     SERVGAGAF"
BASE COUNT          960 a         1903 c         1402 g         1445 t
ORIGIN      
        1 gcgcatggtc gccacttcct gtttgtcgcg cagccggttg agcgcgtcaa acgtggcctt
       61 gatcacgtta tgcgggttcg ccgtgccaat tgacttggtc agcacgttct gcacacccgc
      121 tgaagtcatg accgcgcgca cggcaccgcc ggcaatcacg ccggtgcctt ccggggcggg
      181 cttcagcagc acctgtgagc tcgcgtactt gcccagcacc tggtgcggaa tcgaagtctg
      241 ggtcaggttc accttcacca ggttcttctt ggcgctttcg atgcccttgc ggatcgcctg
      301 cggcacttcc ttcgccttgc ccgatccata gccgaccacg cccgcactgg gatcgccgac
      361 caccaccagc gccgcgaatg acatgttctt gccgccttta accaccttgg tcacgcggtt
      421 gatggccaca acctggtcct tcaggttgta gccgccggca tcgagtttct ttcggattgc
      481 tgttgtcgcc atttagaact ccagacctgc ttcacgcgcc gcatcggcca gcgccttgat
      541 tcttccgtga tagagatacc cgccgcggtc gaacaccact ttcttgatgc ccttctcctt
      601 cgcgcgttcc gcgatcagct tgcctacttc cttcgcgctc gccacgttgc cgccggtctt
      661 cttgtcgcct tttttacggc cctgtaccgt gctcgctgaa accagtgtcg ctccgctgcc
      721 gtcgtcaatc agttgcgcat aaatatggtt gagcgaccgg taaacgttca gccgcggacg
      781 ctccgcgctg cccgtcatcc gttgccgcag gcgatcgtgg atccgccggc ggatactgtc
      841 tttcgaaata tttggaatca tgtcgttacc ctttgcttcg tacagtccct gactgcacga
      901 tcaaatcgaa atccttcctt ggttcaaaat tgggtaattt tgtaatttga aattttgtaa
      961 ttgaaagctt tgagctctcg tcaatcggaa caaaattacc caattaccaa atttcccgat
     1021 tacccaatct atttcgcgcc tgtctttccg accttcttct tcagccgctc gcccgcgtag
     1081 cgcacaccct tctgcttgta aggatccggt ggcctcaatt gccgcatctc agccgcaacc
     1141 tgtcccacct tctgccggtc aatgccgctt accgtcagtt tggtctgctt ggggtcgatc
     1201 gcaacggtca cgcctgtcgg cagcggatat tcgatcgggt gcgagtagcc gagggtgaac
     1261 accaccgtgt tcttgccctt cagttcagcg cggtagccga tccccacgat ctcaatatcc
     1321 ttgttccagc ccttcgtcac gccttccacg gcattgttga ccagcgcgcg tgcaagaccg
     1381 tgcaccgctg caaagtcgtc attctctcgg gtcacgttga tgtgaccgtc ctgcgtctgc
     1441 aacttcacgc cggcaggcaa atgcgtctgc acctggccct tggggccgtt caccaccacg
     1501 gtgttgccct tcacttcaaa cttcactccc gaggggagcg gaatcggttt ctttccgata
     1561 cgagacattt ttgaaaccct tctctcttaa gcgagtcctt cacaccctcg caggctgaat
     1621 tccacgctgg tagcttggct gctggcttta gctcgtagct agaggccagt agctggtatt
     1681 tcgagcgccg cgcaaattac catacttcgc acagaagttc gccgcccacg ccttctttac
     1741 gcgcctggcg cccggtcatc acgcccttgg gcgtggtcag gatgttgatt cccagcccgc
     1801 ccagcacgcg tggaatctca ttgcggccaa cataaactcg gcagcccgga cgcgacacgc
     1861 gctgcaggtt cgagatcgcc gcggcgttgt cattcccgta cttcaggtaa atgcgcagga
     1921 cttttctacc gtcctcttcc gtcgccttga aattggcaac gtagccttct tccttcagaa
     1981 tgcgtgcgat ctccagcttc agcttggaag ccggcacatc gagcttctgg tgacgcgcgt
     2041 ggatggcgtt gcggatgcgc gccagcaaat ctgcgaccgg atcggtcaaa ctcattcgtt
     2101 catctcctct tatcgtcacc cgtttgctcc ggcccgccgg agaacctgcc gtgacgtact
     2161 gcgaaaaccg gccattagta ctgggtacct ggcctttggc tcggctcgcc cgccgagtga
     2221 agccttttcg gcttcgcaat gccctgcccg cgatcagctc tggccaaata ccaatggcca
     2281 aataccaact accacgagct ctttgacact cccggaatct cacccttcag cgccagtccg
     2341 cggaagcaca agcggcaaag gccaaacttg cgcaggtaag cccgcggacg cccgcaaatc
     2401 gaacagcggt tccggtgctg tgtggaaaac ttcggtttct tgttcgtctt ggcaatcttt
     2461 cctgttgtcg ccattgtttc cttctctact caccaaatac caagtaccta ttaccaagta
     2521 ccggttcgaa tctcgttatt gcctgaaagg catgcccagg tgcttcagca acgcccgcgc
     2581 ctggttgtcg tcacgcgccg tcgtcacgat ggtcacgttc atgcccttca gcttgtccac
     2641 tttcgcgtaa tcaatttccg ggaagatcag ctgatcgcgc agtcccagcg tgtagttgcc
     2701 gcgaccgtca aacgacttcg tcgaaacgcc gcggaagtca cgcacgcgcg gcagggcgat
     2761 gttgatcagg cgatcgagaa attcatacat gcggtcgccc cgcaacgtca ccatggcgcc
     2821 aatcgacatg ccttcgcgca ccttgaacgc cgcaattgac ttcttcgcct tggtcaccac
     2881 cggcttctgt ccggtgatct cgcccaggtc gcgaaccagc gggtccagca tttttgtgtt
     2941 ctgggtcgcc tcgcccacgc ccatgttcac cacgacttta tgcagccgcg gcaccgccat
     3001 gggattagtc aggcccagtt ccttcgccag cgctggagca atctccttgt ggaagcgttc
     3061 gcgcaatctg gcattcgttt ttgtctttgc tgttgccatt cctatgttct gcctttctca
     3121 cggtatccgg gttaggccag gcctctacgg tttcgtgagt gaaccctagc ttctagctgc
     3181 tagcctttgt ctctaaattc tccgctactg ctagccgcgg acatctttca tgcacaagcc
     3241 agtagctagc ggccaggagc ttgattattt atccaatgcc gcatcgcaac gccggcagat
     3301 ccttacgctc ttgcctcctt cgcgatgatg tccaacccgc gaaggtccgc aactcgggca
     3361 caccaccatc acgttcgaga tggagatcgg cgattcctgc tcggcgatgc cgcccttgat
     3421 attgcgctgc gggttgggac gcacgttctt cttcaccatc atcacgtgct ccaccagcac
     3481 cgttcccttc tcgggaaaca cgcgcagcac gcgtccctgc ttgcccttgt cgcgcccggt
     3541 gatcactttc acctggtcat tgcgcttgat atcgattctc gtgtgcatct cagtcagcct
     3601 tttcccgttc gcttacagca cctcaggcgc cagcgacaca atcttcaaaa acttcttttc
     3661 gcgcagttcg cgggccaccg gaccaaagac gcgcgtcccc accggctcgc ctgcatcgtt
     3721 gatcagcacc gccgcgttct ggtcaaagcg gatataagtc ccgtcccgac ggcgatgctc
     3781 cttgcgctgc cgcacaatca cgcatttgac cacgctgccc ttcttcgcag tgccatccgg
     3841 cgcggcttcc ttcaccgccg cggtgaccac gtcacccagc ccggcattca gccccgtgtg
     3901 cccgcccagc ggcagaatca tttgcaggcg gcgcgccccg ctgttatccg ccacatccag
     3961 gatggtcctc atcatgactg ccatggttgt ttctccctct gacttcttcg ttcagcgatt
     4021 cggcccttca ggtcgccgaa ccgcgctgct gcaggcgctg gaataatgcg cccatgatcc
     4081 atatcctcga gcggttttcg aaaccaaagc cgctagcttc tatctgctag ctcgtatttc
     4141 gatctttccg cagcctctcc gggcctcaat gccttcagcc cacaccgttt cagggctgaa
     4201 tgctcagtgc tagctggctg cctgctgttc ttctcccgcc accagcttcg ccttccggat
     4261 cacgctcttc agcttccaac gcttcagctt ggaaagcggc cgggtctctt cgatctccac
     4321 aaagtcgccc acgcgcgccg tgttcttttc gtcgtgcgcg tagaacttct tcgccttggc
     4381 gatcacgcgg cgatacagcg ggtgtgcctt tttcatggaa acctgcacca caatggtctt
     4441 ggccatcttg gtggaaacca cctcgccgat cttggtcgcg cggcggccct gttttttttc
     4501 cgttgtcgct gtggtttctg ccatttactt cttcctcgct ttcgcgccgg agctcttctt
     4561 tgcagccgcc ttcttcgccg gagatttctt tttcgcggct ttcttcttcc cagctttctt
     4621 cgccggagca gcggccttct tctccgccgg agtggcgccc tcggtcgctg ccgccttgtc
     4681 tccgttcagt cccagctcct tctcgcgaat gatcgtctgg atccgcgcca cgtccttgcg
     4741 cagcccccga accttgttca ggctctccgt ctgccccatc ttcatctgga acttcaggcg
     4801 gaagagctgg tcattcagct cctgctgctg gtgctgcagt tcattgtccg ttaggtttct
     4861 aagcttttct gcatccatct tgtttgtctc ttttgtcagc tctcagcctt ccgggggtct
     4921 tcctgagtta ttacaggccc ttcaacccgc catgcaaaag ccaattgcta tttgctaatt
     4981 actaattgct actaagctgt cgcctcgtgg cggcccacaa atttcgtccg cagcggcagc
     5041 ttgtgtgagg ccaggcgcat ggcttccatt gcatccgtgc ggcttacgcc ttccatctca
     5101 aacagcacct tgcctggacg aaccaccgca acccagtgat caggagcgcc tttgcccttg
     5161 cccatacggg tttcggccgg cttcttcgtc actggcttgt ccggaaacag ccgcacccag
     5221 atcttgccat tgcgcttgat gaagcgcgtc atggccacgc ggcaggcttc aatctggcga
     5281 tcggtgatcc agcccggctc cagcaccttg agcccgtact ctccaaagga gagctctgac
     5341 ccgcgccacg ccttgccacg catgcgcccg cgctgctgct tgcggtactt aacttttttc
     5401 ggcattaaca tatgtcgatt ccttctatgc cgctaacagc atctttagcc gttagccgtt
     5461 agcctttggc ccttagctct gctgcaccgt cgccttcttc catgcttgag ctaaaggcta
     5521 agcgctaatg gctaaaggct cgatttctaa aatgctcctg cgcccacccg ctcgctggtg
     5581 cgcttcttct gcggcaggat gtcgccacgg tagatccaca cctttacgcc gatcacgcca
     5641 tacgtcgtgc gcgcttcgga gaatccatac tcaatgtccg cacgcagcgt gtgcagcggc
     5701 agccgtccct
//
LOCUS       DASQYP010000352        15003 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_56268, whole genome shotgun sequence.
ACCESSION   DASQYP010000352 DASQYP010000000
VERSION     DASQYP010000352.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 15003)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15003)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15003
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_56268"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(37..1263)
                     /locus_tag="VE783_11425"
     CDS             complement(37..1263)
                     /locus_tag="VE783_11425"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HYX54052.1"
                     /translation="MALLAIALGMCIATAMIAVGNDVGDKINEDLRRNGGNLVLTPIE
                     DTLDVNLGGVDLKPASEGAYIPEADLLKLKGIFWGHNIKGFVPYLTDQKDVAFNGGTF
                     QADLIGTYFDQPLRYGKDDFSTGARTVNGWWKVDGAWPKDDQPASGPVEVLAGSRLAQ
                     EKGLKNGSEVEIAGRKLQVTGILNTGGAEDQAIVAPLHVVQQIAGEPGKVRRVVVSAL
                     TKPEDAFARRDPDKMKPTDHDRWYCTPYANSIAFQIHEALPNVRVEQIRQVEQNQGKV
                     LSRISGMMLLLTLAALLASALAVSAAMAATILERRHEVGLMKSLGASNGSVASLFLTE
                     AAFLALAGAVIGFFGGAALAHRIGQTVFGSAIAVQPIVLPLVICAALTVTLVGSIGAV
                     RKAMQFDPAVVLRGDA"
     gene            complement(1318..2589)
                     /locus_tag="VE783_11430"
     CDS             complement(1318..2589)
                     /locus_tag="VE783_11430"
                     /inference="COORDINATES: protein motif:HMM:NF015213.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S-containing protein"
                     /protein_id="HYX54053.1"
                     /translation="MFQALVVTLREGVEAALIVGITLVYLSKIGRPDLRKTVYAALIS
                     AFLGSVAGAVLLSYLPITQDTFEGWVMLIAAVLVIGMVVFMMRTARRLKGEIETKVGE
                     FAGGGSKWGLFAFIFLMVFREGIETVVILSGVTLNSTELMSFLGTLIGVALAVVFGVM
                     FVKGSVRIDLRKFFRVTTIILFFVAAQLVLSGLHELSETGVLPSSKAEMAMIGPIVRN
                     DYFFPITMLALVALMILLEYKRRQVAPAAAGAGAVPASKAEERMQQHAARRERLWANL
                     VVISAFAFILMVTAEFVYTKSVTALSPAAEVTFDSSGKTVIPTKDLAEGELRRYSATV
                     NGTKVRFLLYRKPDGKIASIFDACQICGSVGFYKSGSGIVCKNCAAPINPQSVGQPGG
                     CNPIPLQSTQDGDSVVINITDLGTQVAQFSH"
     gene            2787..3725
                     /locus_tag="VE783_11435"
     CDS             2787..3725
                     /locus_tag="VE783_11435"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF024871.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HYX54054.1"
                     /translation="MVALRPIWEELLGQQEGTIFQSFDWNLLAARMFAEREEPRVVFV
                     RTSYGMAIIPAARRSADRTIRFLGEELFDYRCPLFVGDPEIVNQAFSFLSASGDPLEV
                     AAVRDRARKFFPPDITLEPFCHAPCVRHKHVSPEQFMLHHSRLPRNLRRLERLGFELK
                     HYSGDASRLIRTIYQRKAEQDRNSLFTDPLRVEFMVNAALLAPEAMDVFTLEWGSELG
                     AALVTLREPQTRRFYTCWFDGASPTIAKHSPSLSLIHEVTRRSLEEGLDCDYMTGEQP
                     YKLRLATDSVPLFRARASAEQLELLAESRTAGLRVA"
     gene            complement(4187..4873)
                     /locus_tag="VE783_11440"
     CDS             complement(4187..4873)
                     /locus_tag="VE783_11440"
                     /inference="COORDINATES: protein motif:HMM:NF021759.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SprT-like domain-containing protein"
                     /protein_id="HYX54055.1"
                     /translation="MQHRLGELFDIVYRELRPRASMPEHEIRFYPFSNLNNTIRLRRG
                     KIFVRLSDLLEGAPEPVLHAILHILIAKLYRKEIDSGHAARYRKHAGSPAVAKKMHLI
                     RQMRGRKRIDTPKGEHYHLEEIFEDLNRRFFHGLMARPQMTWSGNHSRQSLGHYDPAH
                     NTIVVSRVFDRPEVPKYAIEYLVYHEMLHLRHPVKMRGSRRCVHSREFQADEKLFPQL
                     EEAKKFLKGL"
     gene            complement(4984..5523)
                     /locus_tag="VE783_11445"
     CDS             complement(4984..5523)
                     /locus_tag="VE783_11445"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX54056.1"
                     /translation="MKFWTSILLGIALLTSAAVARKRDPLTDAEADKIRQVRLEPYKR
                     LKLYAEFTEARLDKIDSVRNDPKEATERGVKIHDLLEDFSALIDEINENIDMYQSEPL
                     DKDQLKDYKKGLRELTAAENRFGARLRALKNDVSNDPQAKAELPHYQFVLQDAQDAVK
                     SSLETVKEYAAEKKDEKAK"
     gene            complement(5520..6050)
                     /locus_tag="VE783_11450"
     CDS             complement(5520..6050)
                     /locus_tag="VE783_11450"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX54057.1"
                     /translation="MRLYISLVITGLLFTPLSLVRAQQPAPQESPSPQPAQATQQHRV
                     SQQEIDRLKSEIGRSGHGRRAQLNGELADKLVDVADQQFAAGESVKAHGTIKEAFDHA
                     TEAHDEALHTRKKLKEVEIHLRETQRHMEVVRRTLAADDRPALEAMEKKLADYRQDLL
                     DAMFSPKKTAEKEQAK"
     gene            complement(6050..7297)
                     /locus_tag="VE783_11455"
     CDS             complement(6050..7297)
                     /locus_tag="VE783_11455"
                     /inference="COORDINATES: protein motif:HMM:NF025910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HYX54058.1"
                     /translation="MGIIKLAFLLLQAASTLPQRPATDPVAQAEAMLQQQQYAQAEEK
                     LQGIIAMQEKNPQAWFDLGFAESHLGKTAEAIAAYRKATEIVPAWFEANLNLGVALAK
                     SGDSAEAIPVLKHATELKPMTGGQQAVGKAWLSLAEIDEASDPKSAAAAFDKANELTT
                     PDPQLWVRAGEGLMKANDTAGAEQHFLKAANAGNTAGMARLVSLMAKQKRYQEAQPWL
                     MKYLEMQPGDANGHLELARLLSDQGKKSEAIAELEKINKPGVDPAIPMELGEMYLAAN
                     KFGEAELAFRQALPAKAKDPEVHLGLGQALLFQQKYSEAENELGRAIQLKPDFGDAYD
                     YLADAARQNQHYELSIRVLDARAKYLPDNAKTYFLRAISYDHLHATKPALEYYKKFLS
                     VAGDSYPDQQFQARHRIIALQPQ"
     gene            complement(7284..10247)
                     /gene="uvrA"
                     /locus_tag="VE783_11460"
     CDS             complement(7284..10247)
                     /gene="uvrA"
                     /locus_tag="VE783_11460"
                     /EC_number="3.1.25.-"
                     /inference="COORDINATES: protein motif:HMM:NF001503.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006289 - nucleotide-excision repair
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrA"
                     /protein_id="HYX54059.1"
                     /translation="MSLSPNEQIVVRGARVHNLKNIDLEIPHNALTVVTGVSGSGKSS
                     LAFDTIYAEGQRRYVESLSAYARQFLERIEKPDVDLIDGIAPAIAIRQKNTTRNPRST
                     VATATEIYDYLRLLYARAGRTYCSVCGEEVKKDSIDEIAQAVLALGEGTRVNVLFPVR
                     GLNAAPTHEKKKRGRKAKVEAEAQAASANAAMRERLFDLRKKGFNRLFQNNQLFEFST
                     PESLLDIDFNQPLFVLVDRIAVAADQRSRIVESAEQAMRESGEVIFQTAPREEGEEPK
                     RYRFSNKFECKNCHTAYQEPEPRLFSFNNPFGACPRCQGFGNTIDYDLNLVIPDSSKT
                     LSEGAIEPWTKPKYRPLQSDLRKFARAHEIPMDVPWAEMEREHRQMVLDGGDKFPGIQ
                     GFFEWLERKKYKLHVRVFLSRYRGYAQCPDCKGGRLRREALQVKLEGKNICQTSAMTV
                     EQAAEFFNSLSLSPEKKEIAEKILEQVRERLKFLNDVGLEYLTLDRLASTLSGGEAQR
                     IQLATSLGSRLVGALYVLDEPSIGLHSRDTERLVNILHELRNLGNTILVVEHDPDVMR
                     AADRILDLGPGAGENGGRVMAAGAYDEISKLSTSLTGRYLSNELQIQIPVNRRQPGTP
                     MIRVEGARAHNLHNINVEIPLGMLVAVTGVSGSGKSTLVHEVIYQALAAEKGITAGLG
                     PAAGGFRRVTGGQFVADVVLVDQSPIGRTPRSNPVTYIKAFDAIRDVFASVPEATKRG
                     YSAGHFSFNIPGGRCETCQGDGTVTVEMQFLADVELICEDCKGTRYKPTVLEVRYKGK
                     NIHDVLNLTVREAMHFFSGQPKIIDKLRVLEEVGLGYLRLGQSATTLSGGEAQRMKLA
                     AHLVPAGRQRDFEPETEEEKEQRKRARAGKGMLYIFDEPTTGLHFDDVSKLLAAFRKL
                     IEAGGSVLVIEHNMEVIKTADWIVDLGPEGGDKGGQVVVTGSPEVVAQCSKSHTGKWL
                     KRILKTESSHSNGHH"
     gene            complement(10459..10872)
                     /locus_tag="VE783_11465"
     CDS             complement(10459..10872)
                     /locus_tag="VE783_11465"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX54060.1"
                     /translation="MKNRKLIVLTLISFVLALAAAAREDKLTNTGAAPAAEGKVITSN
                     DRNGNTEVEVQVKHMATPQSLTPPRQTYLVWVQPRGQAAELLGALRVNSDSLEGSLKA
                     STTYKDFEVLVTAEDQVHADQPSSTVILKGTVERK"
     gene            11330..11620
                     /locus_tag="VE783_11470"
     CDS             11330..11620
                     /locus_tag="VE783_11470"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX54061.1"
                     /translation="MVTAADCPELINKLFKSDFDLVLLCDSLREEEQRRAIGLIKLYT
                     PSIPVILISSFEGRQYPYADLTVPNNPSAIVAAVDMAASMPLRGRTRANSAA"
     gene            11632..12003
                     /locus_tag="VE783_11475"
     CDS             11632..12003
                     /locus_tag="VE783_11475"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HYX54062.1"
                     /translation="METALARKILVIDDEASVADSLAAILKLNGYCVRACYSGEMAVR
                     TAAEFVPDAIVCDVLMPDLDGIRAARAIRAMLPQCRVLLISGRPDAARVVEAGDHPFE
                     LLMKPFQAGDVLARLQAFALI"
     gene            complement(12016..12501)
                     /locus_tag="VE783_11480"
     CDS             complement(12016..12501)
                     /locus_tag="VE783_11480"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX54063.1"
                     /translation="MKARILLSILGALTISASGWSATGAASGFATLKTLAGEWEGRIE
                     DGKPHITVWKVISGGSAMIEEMPHDSMVTMYHLDNDRLLMTHYCSAKNQPRMQAEISP
                     DGKTITFNFLDITNLAKPSDGHMQKMVLTIVDADHITESWTFRQDGKDASHTFEYTRK
                     K"
     gene            12818..13288
                     /locus_tag="VE783_11485"
     CDS             12818..13288
                     /locus_tag="VE783_11485"
                     /inference="COORDINATES: protein motif:HMM:NF024803.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MerR family transcriptional regulator"
                     /protein_id="HYX54064.1"
                     /translation="MEKQFTSAEVVALTGITPRQLQWWDERGIVVPQREGRRRMYSHD
                     DLTEVAVICALRKKGFPLQRVRRIMKFLQKEFGRRLAATVSSGSDYHLLTDGRRIYLE
                     NSQRQVIDILKNSRQPLLGICLSDAVRDLRAELLGRRPAQRQAVRRNGRRRKSS"
     gene            13379..13642
                     /locus_tag="VE783_11490"
     CDS             13379..13642
                     /locus_tag="VE783_11490"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX54065.1"
                     /translation="MVANLNIVTDWLPEEMSPGSIFVLENAGEVGDQDDPYWAVLSCP
                     ECGTLGLITRKQMRGVMPVICGSNCCPAQFMIQDEEVLPKKPN"
     gene            complement(13639..>15003)
                     /gene="ribB"
                     /locus_tag="VE783_11495"
     CDS             complement(13639..>15003)
                     /gene="ribB"
                     /locus_tag="VE783_11495"
                     /EC_number="4.1.99.12"
                     /inference="COORDINATES: protein motif:HMM:TIGR00506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008686 -
                     3,4-dihydroxy-2-butanone-4-phosphate synthase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3,4-dihydroxy-2-butanone-4-phosphate synthase"
                     /protein_id="HYX54066.1"
                     /translation="SEKVLGLIGATCEITARVEGSTFNTAVQQGQETSKGSEEDLAIM
                     GNCKPIVRLQASSAQLPLLLESLSTPMTADSAIFTDVPTALAEIRAGRMIVVVDDEDR
                     ENEGDLTLAAEKVTPEAINFMAKFGRGLICLAMTSERLDYLRIGPMTRENTSPYGTAF
                     YESVEARDGVTTGISAHDRARTIQVAIDPSSRASDLVRPGHVFPLCARKGGVLVRAGQ
                     TEASVDLARMAGLIPAGVICEIMNEDGTMSRVPDLKIFCEQHAVKMLTVAELIRYRMQ
                     NEHLVVRKGEAVLPTRHGEFRMIAFESQLDGSSHVALVRGEVEKTDGPVLVRMHSHCL
                     AGDVFGGSLCDCQRVLDRSLEMIARNGTGALIYLHQTSRGYSVDDAQRLVFHRESPKL
                     ATPAHQRKTQREIGVGAQILNNLNIHEIRLLTNHPKRVAALEGFGITIIEHVPVPTVN
                     SMAG"
BASE COUNT         3062 a         4480 c         4021 g         3440 t
ORIGIN      
        1 ctttgaccag tatgcgaagg aaaagctgct ggcggctcat gcatcacctc gcagcaccac
       61 cgcgggatca aactgcatgg ccttgcgaac ggctccgatg cttccgacca gcgtcaccgt
      121 gagagcagcg cagatcacaa gtggcagaac aatcggctgc actgcgattg ccgagccaaa
      181 caccgtctgg cctatgcgat gcgccagagc tgcgccgcca aaaaatccaa tcaccgcacc
      241 ggccagggcg agaaaagcgg cttccgtcag gaacagggac gccacggacc cgttgctcgc
      301 gcccagagat ttcatgagtc ctacttcatg ccggcgctca agaatcgttg cggccattgc
      361 cgccgagacg gcaagtgcag atgcgagcag tgcggccagc gtaagcagca gcatcatgcc
      421 ggagatacgg gaaagcacct tgccctggtt ttgttccacc tgccggatct gctccacacg
      481 cacattcggc aaagcttcat ggatctgaaa cgcgatggag tttgcgtacg gcgtgcagta
      541 ccaccgatcg tggtcggtgg gcttcatctt gtcgggatct cggcgcgcaa acgcatcttc
      601 cggcttggtc agggcactca ctaccactcg gcgaaccttg cccggctcgc ctgcaatctg
      661 ctggaccaca tgcagcggcg caacgatcgc ctgatcttcc gcgcctcccg tgttcaggat
      721 tccagtcact tgcagcttgc ggccggcgat ctcaacttca ctgccgtttt tgagcccctt
      781 ctcctgcgcc agccggctgc cggccagtac ttccacaggc ccgctcgccg gttggtcgtc
      841 ctttggccac gcgccgtcta ccttccacca gccatttacg gtgcgtgctc cggtcgaaaa
      901 atcatctttt ccgtaccgaa gcggctggtc aaaataggtg ccgatcaggt cggcctggaa
      961 agtgcccccg ttgaacgcaa catctttctg atcagtcagg tagggaacaa agcctttgat
     1021 gttgtgcccc caaaagatcc ccttcagctt gaggagatca gcttcaggga tataggcgcc
     1081 ctcgctggcc ggtttcaggt caacgccgcc caggttcacg tccagcgtgt cttcgattgg
     1141 ggtaagaacc aggtttccgc cattgcgccg caggtcttcg ttaattttgt cgcccacgtc
     1201 attgcccacg gcaatcatgg ccgtggcgat gcacattcct aaagcgatgg ccagcagggc
     1261 catgcttttg cgtctcttct ggcggcgaaa tgactcaaaa agcaggcgga aaaacatcta
     1321 gtgagagaat tgcgcaacct gggtgcccaa atccgtgata tttatcacca ccgagtcacc
     1381 atcttgcgtg gattgcaggg gtatcgggtt gcagccaccg ggctgcccaa cactctgcgg
     1441 gttaatgggc gcggcgcagt tcttgcaaac aatgccgctg cccgacttat aaaagccaac
     1501 cgagccgcaa atctggcagg catcgaaaat cgaggcgatt ttgccgtctg gcttccgata
     1561 aagcaggaag cgcaccttgg ttccgttgac tgtcgcgctg taccgtctaa gctcgccttc
     1621 cgccaggtct ttggtcggga tcaccgtttt gcctgagctg tcgaatgtca cctcggcggc
     1681 aggtgagagc gcagtcacgc tcttggtgta aacaaattct gcagtgacca tcaggatgaa
     1741 cgcaaaagct gaaatcacca ccaggttggc ccagagccgc tcccgccgcg ccgcatgctg
     1801 ctgcatgcgc tcctccgcct ttgacgccgg gaccgccccg gccccggcag ccgcaggcgc
     1861 aacctgacgc cgcttgtatt ccagcagtat catcagcgcc accagcgcca gcatggtgat
     1921 agggaagaag tagtcattgc ggacgatcgg cccaatcata gccatttcag ccttgctgga
     1981 gggcaaaacg ccagtctcag acagctcatg caatcccgaa aggaccaact gcgcagctac
     2041 aaagaacagg atgatagtgg tcacgcgaaa gaacttgcgc aggtcaatgc gcacgctgcc
     2101 cttcacaaac atcactccga acaccacggc cagggccacg ccgatcagcg tgcctagaaa
     2161 gctcatgagc tcagtcgagt tcagcgttac gccggaaaga atcaccaccg tctcaattcc
     2221 ttcgcggaag accatcagga agatgaaggc aaacagcccc catttcgacc cgccgccggc
     2281 gaactccccg actttggtct cgatctcgcc cttcagcctg cgggccgtgc gcatcatgaa
     2341 caccaccatg ccgatcacca gcacggcggc aatcagcatg acccagcctt caaaggtgtc
     2401 ctgggtaatg ggcaggtaag agagcagcac cgcgccggct acactgccga gaaaggcgga
     2461 aatcagagct gcgtaaacag tcttacggag gtcaggacgg cctatcttag aaagatagac
     2521 caaggtaatg ccgacaataa gcgcggcttc aacgccctcg cgcagggtga ccactaaggc
     2581 ctgaaacatg gtggctcaat cttgaaaatg aatttcaatt tcaatttcaa ttgtacgcag
     2641 ctccaaaact cgagtcaatc aaatgaaaat acaagctctt taaccatttc aggcctctga
     2701 cgcaagccgc tggaacatct cacgcggatg tttttcgcgt ctaaacagcc gtgctaaggg
     2761 ttcaggtctg tcgctctccg caggacatgg tcgcgctccg gcccatatgg gaggagctgt
     2821 tggggcagca ggaaggcacc atattccaga gctttgactg gaacctgctg gctgcccgga
     2881 tgttcgccga aagggaagag ccgcgagtcg tctttgttcg gacgtcttac ggaatggcga
     2941 ttattcccgc agcccggcgt tccgctgatc gcacaatccg gttcctggga gaggagctgt
     3001 ttgactatcg atgtcctctc ttcgtgggcg atcccgagat cgtcaatcag gctttctcgt
     3061 tcctttcagc ctccggcgat ccgctcgaag tagctgctgt ccgtgatcgg gcacgaaagt
     3121 tcttcccgcc agacatcact cttgagccct tctgccacgc accctgtgta cgccataagc
     3181 acgtatcccc ggaacagttc atgctccacc attcgcgcct tccccgaaat ctgcgccgcc
     3241 tggaacggct gggctttgaa ctgaagcact actccggcga tgcaagccgg ctcattcgca
     3301 ccatctacca gcgcaaagcg gagcaggatc ggaacagcct gttcaccgat ccacttcgcg
     3361 tcgaattcat ggtcaatgct gcgttgctcg cgcctgaagc aatggacgtt ttcacgttgg
     3421 agtggggcag cgaacttggc gccgccctcg tcaccttgcg cgagccgcag acccgccgct
     3481 tctatacatg ctggttcgac ggcgcgagtc ccactattgc caaacactca ccctcactga
     3541 gcctgatcca tgaggtcact cgacgctcgc ttgaagaggg gctcgactgc gactacatga
     3601 cgggggaaca gccgtataag ctccgtctcg ccaccgattc ggtcccgctg ttccgcgccc
     3661 gcgcatcggc tgaacaactg gaactgctgg ccgagagcag aaccgccgga ctcagagtcg
     3721 cctgattttt gactccgtgt gcgattgagt tcatcccatt catgaaataa ctagcctccg
     3781 cgttccggat cacccgatct cccgatccgg taccccctct accccctccc cctttcatcc
     3841 caatccatcc cgagttatcc cgaccccatc ccaacctcat cccgccgcga tccacaccgc
     3901 catcccaacc catcccaacg cggggcgctg gcgttcatag tcgtgacaaa ctcaaaaatt
     3961 gaatgactca tgggcacact tatccgtgac gaataaagag gaaattttgt aatatattcg
     4021 ccctgctgtc aagatgatcg ttaggcccat aaatcgtctt ttgctcaatg ccagccggta
     4081 gagctgcggc atgccgcggc tcactctcag gttagagagg gtcgtaagct cgtcgcgaat
     4141 ccggtggaga gcaggtactt tagcgcgcag acttgcctcg tccacactac agccccttca
     4201 aaaatttctt cgcctcttcc agctgcggga acagcttctc atctgcctgg aactcgcgag
     4261 aatgcacgca cctacggctc ccacgcattt ttaccggatg ccgcagatgc agcatctcgt
     4321 gatagaccag atattcaatc gcatatttcg gcacttcagg gcgatcgaac acccggctca
     4381 ccacgatagt gttgtgcgcc gggtcgtagt gccccaggct ctgccgggaa tggttgccgc
     4441 tccacgtcat ctggggacgc gccatcagcc cgtgaaagaa gcgccggttc agatcttcga
     4501 agatttcttc caggtgatag tgctctcctt tgggagtatc gatgcgcttg cgtccgcgca
     4561 tctgccggat caggtgcatc ttcttcgcga cggctggact tcctgcgtgc ttccggtatc
     4621 gggcggcatg cccggaatca atctctttgc gatagagttt tgcgatgagg atatgcagaa
     4681 tcgcatgcag caccggctcg ggcgcgcctt ccagcaggtc tgaaagtcgc acaaagatct
     4741 ttccccggcg gagccggatg gtgttgttca gattgctaaa ggggtaaaag cggatttcat
     4801 gctccggcat ggatgcgcgc ggccgcagct cgcgataaac aatatcaaaa agttctccaa
     4861 gacggtgctg cataagatgg caggtgcttc aatatcttgc tgagctttga agtgaagtgt
     4921 tcttaccggt gtagtcacca cgttttctta tcttgcgtgc atctgcgtca atctgcgtca
     4981 aaactacttg gccttctcat ccttcttttc tgccgcatac tccttcacgg tttcaagact
     5041 cgatttcact gcgtcctggg cgtcctgtaa tacgaattga taatgcggca actccgcctt
     5101 ggcttgcgga tcgttgctga cgtcgttctt tagcgcgcgc aggcgtgcgc caaaccgatt
     5161 ctccgccgca gtaagctccc tcaaaccttt cttgtaatct tttagctggt ctttatccag
     5221 tggctcactc tgatacatat caatgttctc gttgatttca tcaatcaggg cagagaagtc
     5281 ttccagaagg tcatgaatct tcactccccg ttctgtagct tctttcggat cattccgtac
     5341 ggaatcgatc ttatccaggc gcgcctccgt gaattcggca taaagcttga ggcgcttgta
     5401 cggctccagc cgaacctggc ggatcttgtc agcctcggcg tcggtcagcg gatcccgttt
     5461 cctcgccact gctgccgacg tcagcagagc aatccccaga agaatacttg tccagaattt
     5521 cattttgcct gttccttctc ggcagtcttc ttcggcgaga acatcgcgtc cagcaggtcc
     5581 tgtcgataat cggccagctt cttttccatc gcttccagcg caggacggtc gtctgccgcc
     5641 agagttctgc gtaccacttc catgtgtcgc tgcgtctccc tgagatggat ttccacttct
     5701 ttcagcttct tacgcgtatg cagcgcttca tcgtgtgctt ccgttgcatg atcgaacgcc
     5761 tctttgattg tgccgtgcgc cttcactgac tcgccggcgg cgaactgctg gtcggcaacg
     5821 tccacaagct tgtctgcgag ttcgccgtta agctgcgcac gccgtccgtg gccggacctg
     5881 ccgatctcgg atttgagacg gtcgatctcc tgttgcgaaa cccggtgctg ctgagtcgct
     5941 tgcgccggct gcggcgaggg tgattcctgc ggcgcgggct gctgcgcccg gaccaatgag
     6001 agcggcgtaa acaacagacc ggtaattaca agcgaaatgt agagtcgcat cactgtggtt
     6061 gcagggcaat gattctgtgg cgcgcctgga actgctggtc aggataactg tctcccgcaa
     6121 cggatagaaa ctttttgtaa tactcgagcg ccggcttggt ggcgtgcaga tggtcatacg
     6181 agatggcccg caggaaatag gttttggcat tatcgggcag atatttcgcc cgcgcatcca
     6241 acacccggat tgagagttca tagtgctggt tctgccgggc cgcatcggcc aggtaatcgt
     6301 acgcgtcccc gaaatccggc ttaagttgaa tggccctgcc aagttcgttc tccgcttccg
     6361 aatatttctg ctggaagagg agtgcctggc ctagtcccag gtgcacttcc ggatctttgg
     6421 cctttgccgg caatgcctgg cggaaagcca gttccgcttc cccgaatttg ttggcagcca
     6481 gatacatttc ccccagctcc atcgggatcg ccggatcaac tcctggcttg ttgattttct
     6541 cgagttcggc aatcgcctca ctcttcttcc cctgatcgga gaggagccgg gcaagctcga
     6601 gatgaccatt ggcatcgccg ggctgcattt caagatactt catcagccac ggctgggctt
     6661 cctgataccg cttctgcttt gccatcaggc tcaccagccg cgccatgccc gcggtgtttc
     6721 ccgcgttcgc tgctttaaga aagtgctgtt ccgcaccggc cgtgtcattg gctttcatga
     6781 gcccttcacc agcccgcacc caaagctgcg gatcaggggt tgtgagctca ttggctttat
     6841 cgaaagctgc tgcagcgctt ttgggatcgc ttgcctcgtc aatttcagcc agtgacagcc
     6901 acgctttccc gactgcctgc tgtcctccgg tcatcggctt gagttcggtg gcgtgcttca
     6961 gtacaggaat ggcttcggct gagtcgccgc tctttgccag tgcgactcca agattcaggt
     7021 tcgcctcaaa ccacgcaggc acaatctcag tggctttgcg ataagccgcg atggcctctg
     7081 ccgttttgcc caggtggctt tcggcgaatc ccaggtcaaa ccatgcctgc ggattcttct
     7141 cctgcatggc aattatgcct tgaagttttt cttccgcctg agcgtattgc tgctgttgca
     7201 gcatggcttc tgcttgcgcc accggatcgg tggccggccg ctgcggcagc gtggaggccg
     7261 cctgcaatag caggaacgcg agtttaatga tgcccattcg agtgggaact ctcagttttt
     7321 aagatgcgct tcaaccactt tcccgtatgg gatttggagc attgtgccac aacttccggc
     7381 gaccccgtca caacaacctg tccacccttg tcgccgcctt ccggacccag gtccacgatc
     7441 cagtccgccg tcttaataac ctccatgttg tgctcgatca ccagcacaga tccgccggcc
     7501 tcaatgagtt tgcggaaagc agcgagcagc ttgctcacgt catcaaagtg cagccccgtt
     7561 gtcggctcat caaaaatgta gagcatgccc ttaccggcgc gtgcacgctt gcgctgctct
     7621 ttctcttctt cggtctccgg ttcaaagtcg cgttggcgtc cagcaggcac caggtgggct
     7681 gccagtttca tgcgttgtgc ctcaccgccg ctcaacgtgg tcgcggattg tcccagcctc
     7741 agatatccca gccccacctc ttctaaaacc cgaagcttgt caatgatctt cggctgtccg
     7801 gagaaaaagt gcatggcttc acgcacagta aggttcagca catcgtgaat gttctttccc
     7861 ttataacgaa cttccagcac agtgggctta tagcgcgtac ctttgcaatc ttcacaaatg
     7921 agttccacat ctgccagaaa ctgcatctcc actgtcaccg tgccatcgcc ctggcaggtt
     7981 tcacagcgac cgccgggaat gttgaacgaa aaatgtcctg cgctgtagcc gcgctttgta
     8041 gcttcaggta ccgatgcgaa cacatctcgg atggcgtcaa acgccttgat ataagtgacc
     8101 ggatttgacc gtggcgtcct gccaatgggc gactggtcca ccagcaccac atccgccacg
     8161 aactggcctc cggttactcg cctgaaaccg cccgcggctg gtcccagccc ggcagtaatt
     8221 cctttttccg ccgccagcgc ctggtaaatc acttcgtgaa ccagcgtgga tttgcccgag
     8281 ccggatactc ctgtaaccgc aaccagcatt cccagcggaa tctccacgtt gatgttgtgc
     8341 aagttgtggg cgcgtgcacc ttccacgcgg atcatcggag tgccaggctg tcgccggtta
     8401 accgggatct ggatctgaag ctcgttgcta agatatcgac cagtgaggga agtgctcagc
     8461 ttgctgatct cgtcataggc tccagcggcc atcacccgtc cgccgttttc acccgcaccg
     8521 ggaccgagat caagaatccg gtcagccgcg cgcataacgt ccggatcgtg ctccaccacc
     8581 aaaatggtgt ttcccaggtt tcgcagttca tgcaggatgt tcaccagccg ctcggtatcg
     8641 cggctgtgca gcccgattga gggttcatcc agcacataaa gggcgccgac cagccgtgat
     8701 cccagtgaag tcgcgagttg aatgcgctgt gcttcaccgc cagagagagt ggatgccaag
     8761 cggtccagag taaggtattc cagacccacg tcattcagga acttcagccg ctcgcgcacc
     8821 tgctccagga ttttctctgc gatttccttc ttttccggcg ataagctcaa gctgttgaag
     8881 aactctgccg cttgctcaac tgtcatcgca ctcgtctggc agatattttt accctcaagc
     8941 tttacttgaa gtgcctccct cctcaggcga ccgcctttgc agtcggggca ctgcgcgtac
     9001 ccgcgatacc ggctcaggaa cacccggacg tgtagcttgt atttcttgcg ttccagccac
     9061 tcgaagaagc cctgaatacc aggaaatttg tcgccgccat ccagcaccat ctgccggtgc
     9121 tcgcgttcca tctccgccca cggcacgtcc atgggaattt catgtgcccg agcaaacttc
     9181 cgcaggtcgc tttgcagggg ccggtatttg ggtttggtcc agggctcaat cgcgccttca
     9241 ctcagggtct tgcttgaatc cggaatcacc aggttcagat cgtaatcaat cgtgttgccg
     9301 aacccctggc accgcggaca cgcaccgaac gggttattga atgaaaacag ccggggctct
     9361 ggttcctgat aggcggtgtg gcagttcttg cattcgaact tgttggagaa gcgataccgc
     9421 ttcggctcct cgccttcttc gcgcggcgcg gtctgaaaaa tcacttctcc cgactcgcgc
     9481 atggcctgct cagcgctctc cacgatccgg ctgcgctggt cggccgcgac ggcgatacga
     9541 tccaccagca caaacaaggg ttgattgaag tcgatgtcca gcaacgactc cggcgtggaa
     9601 aattcaaaga gctgattgtt ctggaacagc cggttgaaac cttttttgcg cagatcgaag
     9661 agccgttcgc gcatggcggc gttcgccgag gcagcctgcg cttcagcttc tactttcgct
     9721 ttgcgcccac gcttcttctt ttcatgggtg ggagcagcgt tcagcccgcg aaccgggaaa
     9781 agcacattca cccgtgtacc ttcacccaga gccaggactg cctgcgcgat ctcatcgata
     9841 ctgtcttttt tcacttcctc gccgcacaca gaacagtaag tccggccggc gcgggcatag
     9901 agcagacgca ggtagtcata gatctcggtg gcagtggcta ccgtggagcg tggattgcgc
     9961 gtcgtgttct tctgccggat ggcgatcgcc ggagcgatgc cgtctatcaa gtcaacgtct
    10021 ggcttctcaa tacgttcgag aaattgccgc gcgtaggcgg aaagtgattc cacgtaccgc
    10081 cgctgccctt cggcataaat agtgtcaaaa gccagggaag acttgcctga ccctgaaacc
    10141 ccggtcacca ccgtgagggc gttgtgtggg atttcaaggt cgatattttt aaggttatgg
    10201 acccgggcgc cccggactac gatctgttca ttgggagaaa gagacatcgt caccaaacca
    10261 gccatcgcgt gccttaccgg aaggcccagc aatgtggctg aatccttcta ttatagcggg
    10321 tcaggaaagt tctctcgtgc ctccaacatc gccagtccgg cacccgcgaa tcgccatgtg
    10381 cctgtgcctc catctcgtcg ccaaatgaaa aaagcgggcc cgttcagacc cgcttcagga
    10441 gcttaacatt cgggccggct attttcgttc cactgttcct ttcaggatta ccgtgcttga
    10501 gggctgatcg gcgtggacct gatcttcggc tgtcaccagc acctcgaaat ctttataagt
    10561 agtggacgcc ttcagactgc cttccaggga atcggaattt actcgtaaag cgccaagcaa
    10621 ctcggcggcc tggccccgtg gctgcaccca caccagataa gtctgtcgtg gaggcgtcag
    10681 agactgcggc gtggccatgt gcttcacctg tacctccacc tcagtatttc cattgcggtc
    10741 attactggta atgactttgc cttcggccgc cggagcagcc cccgtattgg tcaatttgtc
    10801 ttcgcgcgcg gccgccgcaa gcgccagcac gaagctgatg agcgtgagaa caatcagctt
    10861 gcgattcttc atgtatttcg tcccccaagg tgcatttttc aatttgaaaa atgtgatgaa
    10921 cattcctttc accatgttgc tgccgaaaca ggcaagacgg gcagaatcgc gttcagattc
    10981 aggagttctc gccagcggca ctggcctgca atcttcgtcc ggccttggcg caagttgacg
    11041 cgctgctctg gtcaacgttt gcggcgccgt ctgcttctta ctctccgtag gttcgccggc
    11101 tggagcagta atgctcacgg caggcagccg gtgaacctct tattaatttt ttctcagctt
    11161 ctggttagcc cctttcctcg ttacctctcc agagtggccg aacttggcgt tttgagcagc
    11221 actgcatccc aactacctta aaatcatggc ttttctgatt ctttgcgccg ggcgcgaccc
    11281 ccacgcactc cggttccgca gtacattttt gcgcgaagca ggattccaag tggtcacggc
    11341 agccgattgc cccgaactga ttaacaagct ttttaagagc gactttgatc tggtgttgct
    11401 ctgcgattcg ttacgcgagg aagaacagcg ccgtgccata ggcctcatca agctgtacac
    11461 gccttccatc ccggttatcc ttatctccag ctttgaaggc cggcagtatc cctatgccga
    11521 tctcacggtc cccaacaatc cgtcagccat tgtggctgcc gtcgatatgg cagccagcat
    11581 gccattaagg ggcaggacgc gcgctaacag cgctgcgtag ctgttagccg tatggaaact
    11641 gcactcgcca ggaaaatcct tgtgatcgac gacgaagctt cagtggcaga cagtctcgcg
    11701 gccatcctga agctgaatgg gtattgcgta cgcgcctgct actcgggtga gatggcggta
    11761 agaactgctg ccgaattcgt ccccgacgcg atcgtctgtg atgtacttat gcccgatttg
    11821 gacggtattc gggccgccag ggccattcga gccatgctgc cccaatgcag agttctgttg
    11881 atctccggtc gtccagatgc cgcccgagtt gtggaagccg gtgatcaccc attcgaactg
    11941 ctcatgaagc cgttccaggc cggtgatgtg ctggcacgat tacaggcatt cgccctgatc
    12001 tagaactgca gccttctatt tcttccgggt gtactcaaac gtgtgcgagg cgtctttccc
    12061 atcctgccga aaggtccagc tctcggtgat atggtcggca tccacaatgg tcagcaccat
    12121 tttctgcatg tgcccgtcag aaggttttgc caggttggtg atgtccagaa agttgaatgt
    12181 gatggtcttc ccatctggtg aaatttccgc ctgcattcgg ggttggtttt tggcgctaca
    12241 atagtgggtc atcagcagcc gatcgttgtc caggtgatac atcgtgacca tgctgtcatg
    12301 cggcatctct tcgatcattg ccgaaccgcc ggaaatcacc ttccagacag ttatgtgtgg
    12361 tttcccatct tcaatccggc cttcccactc gccggcgagc gtcttcagtg tcgcgaatcc
    12421 ggacgcagca ccggtggcgc tccaaccgga agcgctgatc gtaagggcac ccaggatcga
    12481 cagcagaata cgagctttca ttgaaaaatc ctcctgtgcg gcggggccgc tcctgaaata
    12541 gtggcttttc attctattac ccacaaagcc gaattccttt acaagttttt tgctcgtgag
    12601 aggcagcggg aaacttcggc tgagctcgcc cgacgggctt tcagctgaat tatgctcccg
    12661 ccgggtgcac cgagcgcgtc agatcaagca tcatcaggct gcatgtctca tctcgcatga
    12721 gcaaaattcc acttagcaga gttgactttc atggttctgc acgtaaaatg atgcaaacat
    12781 ttagctcagg aaatgtttaa aacatttcct gaagagtatg gaaaagcagt tcacgtcagc
    12841 agaagtggtt gcactgaccg gaattactcc gcggcagttg cagtggtggg acgaacgagg
    12901 cattgtggtc ccgcagcgtg aaggccgtcg caggatgtac tcgcacgacg atctcacgga
    12961 agttgcggtg atctgcgcgc tgcggaagaa aggcttcccg ctgcagcggg tgcgccggat
    13021 tatgaagttc ctgcagaagg aattcggacg ccggcttgcg gccaccgtga gcagcggttc
    13081 ggattatcat ctgctgactg acggccggcg aatttatctg gagaactcgc agcggcaggt
    13141 gattgatata ttgaagaact cgcgccagcc attgctcggc atctgcctga gcgatgcggt
    13201 gcgcgacctt cgggcggagc ttttggggcg tcgcccggca cagcgacagg cggtgcgccg
    13261 taatggacgc cgccggaaga gttcgtgacg gcaaccacga acccgctata cacaatcgaa
    13321 ctaagtacgt aggtgacgag caagcaaggg agaacagggc atttagacgg aggagaccat
    13381 ggtggcaaac ctgaatatcg tgaccgattg gcttcccgaa gaaatgagtc cgggcagcat
    13441 cttcgtactc gagaacgcgg gtgaggttgg tgaccaggac gatccatact gggccgtgtt
    13501 gagctgtccg gaatgcggga ctctgggact gattaccaga aagcagatgc gcggggtgat
    13561 gccggtgatc tgcggatcaa actgctgccc ggcgcagttc atgatccagg atgaggaagt
    13621 tttaccgaaa aagccgaact aaccggccat tgagttcact gtaggcaccg gcacatgttc
    13681 gatgatggtg atgccaaacc cttccagcgc ggccacgcgc ttgggatggt tggtgagtaa
    13741 cctgatctca tggatgttca ggttgttaag aatttgcgcg cctactccga tttccctttg
    13801 cgtctttctc tggtgtgccg gggtggcaag cttgggcgat tcgcgatgaa aaaccagccg
    13861 ttgcgcatcg tccacactat atcctcgcga ggtctggtgc aggtagatca gagcgcccgt
    13921 tccgttgcgg gcaatcatct ccagagaacg gtccagcacc ctctggcaat cgcacaatga
    13981 tccgccaaat acatcgcctg ccaggcaatg cgaatgcatg cgcaccagca ccgggccatc
    14041 tgttttttct acttcgcccc gcaccaatgc cacgtgcgat gagccgtcca attggctttc
    14101 gaaggcaatc atgcggaact cgccgtgtct ggttggaagc acggcctcac ctttgcgtac
    14161 caccagatgc tcgttctgca tgcgatagcg gatcaactcc gcaaccgtga gcatcttgac
    14221 ggcgtgttgc tcgcagaaaa ttttcaggtc cggcacgcgt gacatggtgc catcttcatt
    14281 catgatctcg cagatcaccc ctgcgggaat caggccggcc atgcgcgcca ggtccacgga
    14341 agcctcggtc tggccggcgc ggaccagcac gccgccttta cgagcgcaca gcgggaatac
    14401 gtgcccggga cgaaccaggt ctgacgcgcg gcttgaggga tcaattgcta cctgtatggt
    14461 gcgagcgcga tcatgcgcag aaattcccgt ggttacgcca tcccgcgcct caacgctttc
    14521 ataaaacgca gttccatacg gcgaggtgtt ctcacgggtc atggggccga tgcgcaagta
    14581 gtccagccgc tcggaagtca tggccaggca aatcaggccg cgaccgaact tcgccatgaa
    14641 gttgatagct tccggggtga ctttctcggc cgccagcgta aggtcgcctt cattttcgcg
    14701 atcctcatcg tcaaccacca cgatcatccg accggcacga atctctgcga gagccgttgg
    14761 aacgtcagta aatatggcag aatcggcggt cataggcgtg ctaagagatt ctaacaaaag
    14821 gggtagctgg gctgaactgg cctggagtcg cacaataggc ttacaattcc ccattatggc
    14881 caagtcttct tctgagcctt ttgaggtttc ctgcccctgc tgcaccgcag tgttgaaggt
    14941 ggacccttcc acccgagcgg taatttcgca cgtggcgccg atcaagccca aaactttttc
    15001 tga
//
LOCUS       DASQYP010000353        10902 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_247663, whole genome shotgun sequence.
ACCESSION   DASQYP010000353 DASQYP010000000
VERSION     DASQYP010000353.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 10902)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10902)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10902
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_247663"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1468)
                     /locus_tag="VE783_11500"
     CDS             complement(<1..1468)
                     /locus_tag="VE783_11500"
                     /inference="COORDINATES: protein motif:HMM:NF012958.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase-fold protein"
                     /protein_id="HYX54067.1"
                     /translation="MRKILSISILLLCPLLGLSAVSSAAELQVGKMQEGTVHDGKGPG
                     YTLPLKAGDYVEAELNLGKTELVITIYDPAGSKCRAFRLDEDYGAQLRFVAEATGIYR
                     LEVAGRKASETGKFSLTLSKVVPLEQRLAAAPGPNHYESTRIKQLNAEVKAGKQDAVA
                     RFWEEARAKGTPLLEPIAGDSRFMLATFLWQGDQTTKNVFVELFPYVLAWPVDYSMVR
                     LGETDVWYKTIKMHRQTRCVYRLAANASYFNPGRDRDQVRTTMFFASGRTDPLNPRHW
                     LHDPENPDNVNYTDFSVLELPDAPAQPWTKPRPGVPSGAAETHRFKSTMLNNERDLII
                     YLPAGYDKNARQPYGLIVFFDGYAYMAKGTEAPWIPGSTTLDNLIAEKRIPPVVGLFI
                     DNPPGMRNPELACNLKFLDSLNSEMVPWVRKHYNVTRDAKNTLAGGLSFGGLSAACAA
                     LHHPETFGNVLAQSGGFAWSPPRSGEDLFARMRAYDPDD"
     gene            1649..3157
                     /locus_tag="VE783_11505"
     CDS             1649..3157
                     /locus_tag="VE783_11505"
                     /inference="COORDINATES: protein motif:HMM:TIGR00273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0019516 - lactate oxidation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LutB/LldF family L-lactate oxidation iron-sulfur
                     protein"
                     /protein_id="HYX54068.1"
                     /translation="MSTPPQSRATPSADNVRAHDEGKSAQAQKRHDVSAAQQFLRDAA
                     IKSADLVHREIIRKNMDSYHVAHDRGRSRFANWEAARQRCQEIKREAINNLEKYLLQF
                     EENVIANGGKIFWAATSEEACQYVTELAVRHRVKTVVKSKSMVTEEIHLGAALEKVGC
                     DVWETDLGEYIVQLRNEGPYHIVTPAMHLNRTQIAELFRDKFNEPNLTEEPEDLVAAA
                     RRKLRKAFFAAEMGISGANFLIADSGVIAVSTNEGNGRLTTSLPKIHVAVTGIEKILP
                     RLEDLATFWPVLATSGTGQPITTYGTLVGGPRRQGEVDGPEEFHVVLVDNGRSNLLAH
                     KEEREVLHCIRCGACLNICPVYRHVGGHAYGTPYPGPIGSVLVPRLEGKKFEHLSYAS
                     SLCGACTSVCPVKIDLHHHLLHNRRDFTEKGSASPAERVQFKLWRMAMQSPKLYAIGG
                     WLMRRSLKAIYGFGLSGSMLDPMRAWNKGRAAVPLPPQSFREQWKKGLKNGS"
     gene            3147..3791
                     /locus_tag="VE783_11510"
     CDS             3147..3791
                     /locus_tag="VE783_11510"
                     /inference="COORDINATES: protein motif:HMM:NF014628.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LUD domain-containing protein"
                     /protein_id="HYX54069.1"
                     /translation="MAANGSRELILQRIREGLKVAVPGPPPPTDTAPIFEPITNPLER
                     FAAECKGNLIALSIARDAAESRAQLKAELDSLPEGQIHIQDAPVLRQMIDAIQLNRSV
                     FWSSQGAPPESAQATISLAEAFVAQTGSIFVSAACGGRGESVVAPCHVVFGTVAQLVP
                     DLTTALRNAAQQGTVRKNSYACMISGSSRTADIEKILVQGAHGPRRLAVILQQS"
     gene            complement(3818..4762)
                     /locus_tag="VE783_11515"
     CDS             complement(3818..4762)
                     /locus_tag="VE783_11515"
                     /inference="COORDINATES: protein motif:HMM:NF012955.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HYX54070.1"
                     /translation="MAKSQLIAPGVVRVPTGIANAYLVGSATRWLLIDTGTPGNTANI
                     LRAVEKHFHNAAPPVAIILTHGHFDHAGSASTLAEHWGVNIYVHPLETPFVNGDSEYP
                     PPDPTVGGFMAQVIRFVPNAKFDLRPHLRELEPGEIPWLNGWEIVETPGHTAGHISLF
                     RPRDKVLLAGDAFTTVNQDNMIGMLSQKPQVWRPPTYYTPDWQSARQSVRKLASLRPL
                     VLGAGHGRPMAGYAALDQLQQLAEDFPIPDYGRYVQEPARSDRHGLTYVPPPVPDPVK
                     RTATVVGAGVAVGTGAIWLMRRNRASRSTGDVEIDRAA"
     gene            complement(4848..5588)
                     /locus_tag="VE783_11520"
     CDS             complement(4848..5588)
                     /locus_tag="VE783_11520"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR00050.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008173 - RNA methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0009451 - RNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TrmJ/YjtD family RNA methyltransferase"
                     /protein_id="HYX54071.1"
                     /translation="MVTTVSSALSRLSVVLVRTRNPLNIGAAARAMSNFGFSDLRLVE
                     AYAPSLDEARSAVGATELLKTARNFSSVSDAVADCNLVVGTTAGRNRELHQPLRDLPS
                     AVPELIEALASGRVAVLFGSEKIGLKNEELSYCQQVLRIPTVETNVSMNLGQAVAVCL
                     YQLSAYRTPDVLSKPRSSELAASGQLERISHLLLELLLETDYTQPHTQSAVEEKVRRL
                     IRRMQLNHEDAELWMGMLRQIQWRIRKP"
     gene            complement(5590..6582)
                     /locus_tag="VE783_11525"
     CDS             complement(5590..6582)
                     /locus_tag="VE783_11525"
                     /inference="COORDINATES: protein motif:HMM:NF000689.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004325 - ferrochelatase activity
                     [Evidence IEA];
                     GO_process: GO:0006783 - heme biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ferrochelatase"
                     /protein_id="HYX54072.1"
                     /translation="MSSFHALLVISFGGPEKKEDVLPFLENVLRGKNVPQERMLEVAE
                     HYYHFGGRSPINDQNRALIAALEQEFASHGLKLPIYWGNRNWQPLVGDTIRQMHNDGV
                     RHAVALATSAFGSYSGCRQYRQDIGTALEEAAAQDLVIEKLDNFCDRPEFIEVMAERV
                     RSASAQLPDAEQIVFTAHSVPISMAQSSPYVRQLELASEKVARECGMRQWALVYQSRS
                     GPPSQPWLEPDICDYLRAQHAAGVRSVIVCPIGFISDHMEVLYDLDTEARALCDELGL
                     RMVRAGTAGPHPLIASMVREMILQCQTTPVMAHCEPGCCPTPQRPAVKPLTTAG"
     gene            6882..8186
                     /locus_tag="VE783_11530"
     CDS             6882..8186
                     /locus_tag="VE783_11530"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF024871.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HYX54073.1"
                     /translation="MPLKQPPEISPDTAAAAGRLARDESFQVLTLGTADELSSHVAAI
                     EDLACSVVEANVFYEPWMILPALKAFGKSKNLIFVLLYLQGTNERGGQLCAFFPFERR
                     TRFARLPARTLILWQYQECYLSTPLLRRGYELPAIRALVQWARNSPMGADVIEGIEMG
                     GDGVVHSSLLRTLQSLGLKSLAAWRDRPLMVPRASCEEYMRQAISGDRRRVLRSRQRN
                     LEKLGPIHYTEPMETTLDSWIDNFLDIEASGWKGRQKVAAVCHENTREFFRTVIREAC
                     RRGRLEAFTLNCGAVPVAARCSFMARPGAFLYKSAYQEQYARYSPGALLELERIRRAH
                     ENKEIHWVDSCVSASFDHYLPWIDRRSIADIAWSTGTLRGNLILRLAPLVRRLKEWLA
                     NRKPAVNPKGELVAQKPAQLAPKNVLEMPVDATRKLKAGGGE"
     gene            8183..9223
                     /locus_tag="VE783_11535"
     CDS             8183..9223
                     /locus_tag="VE783_11535"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF025025.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HYX54074.1"
                     /translation="MTANIDLRVSVVIPTFNRAELLKFSVDSVLAALEPGDEVIVVDD
                     GSTDHTEQLVASFGSPVRYLKTENRGAGAARNAGIAAANHDLVAFNDSDDVWLPNHLR
                     LQRQIMAARPDVLFCFSNFGGITAEQEHVHDSLGYWLEEFGYSRTCPWDRLIGAGVPF
                     SSIGQLAQGEADFKVHLGDIYPTELDFNYISVITLLVRRRAAGKALHFPEDLNWGEDW
                     ECMARLSRAGLAAYLDCETAEQRVHSGPRLTKADWVNKAALQLKLIERVWGSDAGFMR
                     QNRSRYQAAAARIHLVRARALIVQGSTSEAREELRLAGAAPFSYHALAALPGSLVRGL
                     LNARREVLGWVR"
     gene            9220..10353
                     /locus_tag="VE783_11540"
     CDS             9220..10353
                     /locus_tag="VE783_11540"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF024871.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HYX54075.1"
                     /translation="MTQTYPIQVEVVRGGMEQLDALAPEWRALCDINAKSEPFVRPEF
                     IRAYLKAFEPEASLVIFTASCRGELLALLPMIEEKVRFAGLPARTLRGAAGTHSARFD
                     LVCAHGEAGQKAIAAIWEELKQQHDWDMIELPLIAEPAEARTLVAMAAESGFPSGWWD
                     AHPGPYVQINGENPDLEPWLQATSANFRQRVRRLRRKAQTEGVLELKSFSLPNDGVLE
                     KFYALESSGWKGKHGTAIVCDPNTRQFYDEVARVAGEQGYFRCYFLTLEDRVLAGFLG
                     LSDGKRFFMLKPAYNEEFSHYSPGHLLAASVIKDCAEHGFQEFDFMPPALRWKTDWSS
                     QVRPSGYGYIFRKGFYGEMLWGMKFRLRPWAKQVVNSIRKKAS"
     gene            complement(10361..10867)
                     /locus_tag="VE783_11545"
     CDS             complement(10361..10867)
                     /locus_tag="VE783_11545"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX54076.1"
                     /translation="MPSRALWISSLFALCIVTAQAQVIVEQKASCFSPACTDVPVTSN
                     APIFPSKPTNGKWEVEDYKRSKDASISCAIVKYQADNKPQVHLLCPGPEIYAPLRVYL
                     ALTWNEAKDVPSSLKNLQVDTNAAVRFKSRPGNPMAELTLRDAARSQKEWVSFNKINV
                     SLVLEKAK"
BASE COUNT         2272 a         3105 c         3250 g         2275 t
ORIGIN      
        1 cgtcgtctgg atcataggcg cgcatgcgtg caaaaagatc ttcgccgctc cggggcgggc
       61 tccaggcgaa gccgcctgac tgagccagca cgttgccaaa tgtttccgga tgatgcaatg
      121 cggcacacgc ggctgacaag ccgccaaaac tcagcccgcc ggccagagta ttcttcgcat
      181 ccctggtcac gttgtagtgc ttgcggaccc acggaaccat ttccgaattc aatgaatcca
      241 gaaatttcag attgcaggca agctccggat tgcgcatgcc tggcgggtta tcgatgaaca
      301 gaccgactac cggcggaatc cgcttctcgg cgatcagatt gtcgagtgtc gtcgatcctg
      361 gaatccaggg agcctccgtt ccctttgcca tgtaggcgta gccgtcaaaa aatacgatca
      421 gcccgtaagg ctggcgcgcg ttcttgtcgt aacctgccgg caaatagatg atgagatcgc
      481 gttcattgtt cagcatcgtg ctcttgaacc ggtgcgtctc agcggcgccg gaaggaacgc
      541 ccggccgcgg ctttgtccag ggctgtgccg gcgcatcggg cagctccaac acggaaaaat
      601 cagtgtaatt cacattgtcc gggttctcag gatcgtgaag ccaatgcctg gggttcagcg
      661 gatcggtccg tccgctggca aagaacatag ttgtccttac ctggtcgcgg tctctgcctg
      721 gattgaagta cgacgcgttg gcggccaggc gatacacaca gcgtgtctgg cggtgcatct
      781 tgatggtttt gtaccagacg tctgtctcac ccaggcgcac catgctgtag tcgacgggcc
      841 aggccagcac gtaagggaac aattccacga aaacgttctt cgttgtctgg tcgccttgcc
      901 acagaaaagt tgccagcatg aagcggctgt cgcctgcgat gggctccagc agcggagtgc
      961 ccttggcccg cgcctcttcc caaaagcgcg caacggcatc ttgcttgccc gctttcacct
     1021 cggcattgag ttgtttgatc cgggtgcttt catagtgatt gggacctgga gcggcggcta
     1081 atcgctgttc cagaggcaca actttgctga gcgtaaggct gaattttcca gtttcactcg
     1141 ccttcctgcc cgccacttcc agccggtaga ttcctgtcgc ttcggcgacg aatctgagct
     1201 gcgctccata atcctcatcc aaccggaagg cgcggcactt gcttcccgca ggatcataga
     1261 tggtgatgac cagctccgtt tttccgagat tgagctccgc ttccacatag tcgccggctt
     1321 taagcggaag cgtatagcca gggcctttgc catcgtgcac cgtaccttcc tgcattttgc
     1381 cgacttgcaa ctcagccgcg ctgctcacag ctgaaaggcc caggagcgga cacagcagca
     1441 agatcgagat cgaaagtatt ttgcgcaaga gagtgctcct tcactccgca gggtgatttg
     1501 ttccgctagc ttaacccacg gagcaaccgt tcgcgatcgg cgggcacctg tgtttgctaa
     1561 actcaatacc tagcccagat ggctgcggat aaagttttgg attgggtgag actgaaacag
     1621 tattccaggc atttgataag caaaggacat gagcacacct ccgcaatctc gtgcaactcc
     1681 cagtgctgac aatgttcgcg cccacgatga aggcaagtcg gcgcaggcgc agaagcgcca
     1741 cgatgtcagc gcggcacagc agttcctgcg cgatgccgcg atcaaatccg ccgatctggt
     1801 gcatcgcgaa atcattcgca agaacatgga cagctaccat gtggcgcacg atcgtggacg
     1861 ctcccgtttc gccaactggg aggccgcccg gcagcgctgc caggagatca agcgcgaagc
     1921 catcaacaac cttgaaaagt acctgctcca gtttgaagaa aacgtaattg ccaacggcgg
     1981 caagatattc tgggcggcga cgagcgaaga agcgtgccag tatgtaacgg aacttgccgt
     2041 ccgccacaga gtgaaaacgg tggtcaagtc caagagcatg gtgaccgagg aaattcatct
     2101 cggggccgcg ctggagaagg ttggctgcga tgtttgggag accgacctgg gcgagtacat
     2161 cgtccagctt cgcaatgaag ggccatacca tatcgttacg ccggcgatgc acctgaatcg
     2221 gacgcagatt gctgagctct tccgcgacaa gttcaacgaa cccaatctca ccgaagagcc
     2281 ggaagatctg gtagctgctg cacgacgcaa gctgcgcaaa gccttcttcg ccgcggaaat
     2341 gggaatctcc ggcgcgaatt tcctgatcgc cgatagcggc gtgatcgctg tctccaccaa
     2401 cgaaggcaac gggaggctga ccaccagcct gccgaagatt cacgttgccg taaccggaat
     2461 tgagaagatc ctgccgcggc tggaagacct tgcaacgttc tggccggtgc tggccacctc
     2521 cggcacggga cagccaatca ccacgtatgg aacattggtc ggcggccccc ggcgccaggg
     2581 tgaagtcgac ggaccggaag agttccatgt tgtgctggtc gataatgggc gcagcaacct
     2641 tctcgcgcat aaagaagagc gtgaggtact gcactgcatc cgctgcggcg cgtgcctgaa
     2701 tatctgcccc gtgtatcggc atgtaggcgg gcatgcctat ggcacgccgt atccgggccc
     2761 aatcggcagc gttctggttc cacgccttga ggggaaaaag tttgagcacc tttcttatgc
     2821 gtcgtcactg tgcggcgcgt gcaccagtgt gtgcccggta aagattgatc tgcatcatca
     2881 ccttctacat aaccggcgcg atttcacgga aaagggaagc gcgtccccgg cggaaagggt
     2941 acagttcaag ctctggcgca tggccatgca aagcccgaag ctgtatgcga tcggcggatg
     3001 gctgatgcgc cgcagcctta aggcgattta cggctttgga ctctccggga gcatgctgga
     3061 cccaatgcgc gcctggaaca aaggtcgcgc ggctgtgccg ctgccgccgc aatcattccg
     3121 ggaacaatgg aagaaaggct tgaagaatgg cagctaacgg cagcagagag ctgatcttgc
     3181 agcgcatccg cgaagggctg aaggtggccg ttccaggacc tccgccgccg accgacactg
     3241 cgccaatttt cgagccgatc accaatccac ttgagcgttt tgcagccgag tgcaagggca
     3301 atctgattgc attgagcatc gctcgcgatg ctgctgaaag ccgggcacaa ctcaaagcag
     3361 agctggactc gctgcccgaa ggccagattc acattcaaga tgcgcccgtg ctacggcaga
     3421 tgatcgatgc catccagctc aatcgttcgg tgttttggtc gagccaggga gcgcctccgg
     3481 aaagtgcaca ggccaccatc agcctggcgg aagccttcgt cgcccagaca ggttcgattt
     3541 ttgtgagtgc tgcctgtggt ggccgaggtg aatccgtggt cgcgccctgc cacgttgtct
     3601 ttggaacggt cgcgcaattg gtccctgatc tcacgaccgc cttgcgaaat gccgcgcagc
     3661 agggcaccgt ccgcaaaaac tcgtacgcct gcatgatcag cggttccagt cgtacagccg
     3721 acatcgagaa gattcttgtc cagggcgcac acggaccgcg ccggctggct gttatccttc
     3781 agcaatcctg atacgatcag aagtctgaat ctcggagtta agcagcccga tcgatctcca
     3841 catcccctgt actgcgggac gcgcgattgc ggcgcattaa ccaaatcgcg cccgtgccta
     3901 ccgctactcc cgcacccacc actgtggccg tcctcttcac tggatctgga accggtggcg
     3961 ggacgtaagt gaggccatgc cgatcgcttc gtgcaggctc ctgcacatag cggccatagt
     4021 ccggaattgg aaagtcttct gcgagttgct ggagttggtc gagtgcggca tatcccgcca
     4081 tcggtctgcc gtgtccagcg ccgagcacca gcggcctgag tgaagcaagc ttccgtaccg
     4141 attgacgcgc agattgccag tcaggagtgt agtaggttgg aggacgccac acctgcggct
     4201 tctgcgatag catgccgatc atattgtcct gattcaccgt ggtgaacgcg tcgcccgcga
     4261 gaaggacttt gtcacgcggc cgaaacagag agatgtggcc ggctgtgtgt cccggggttt
     4321 ctacaatctc ccagccgttc agccatggta tttcgccggg ttcaagttca cgcaaatgcg
     4381 ggcgcaggtc aaacttcgcg ttcggcacaa atcggatcac ctgcgccatg aacccgccca
     4441 cggttgggtc aggcggcgga tactctgagt cgccgtttac aaacggggtc tccagcggat
     4501 gtacgtagat gttcacgccc cagtgttccg ccagggtgga agcggaaccg gcgtgatcaa
     4561 aatggccgtg tgtaagaatg attgccaccg gcggcgccgc attatgaaaa tgcttttcca
     4621 ccgcgcgaag tatgttggct gtgttgcccg gcgtgcctgt atcgatcagg agccagcgcg
     4681 tggctgagcc aaccagatag gcgttggcaa ttcctgtggg aacacgaacc actcccggag
     4741 caatcagttg agacttggcc attaatgcac ctctcgattg tgcttgagat gccttggccc
     4801 ttcgatgcgt tgcggatcgc agcccggaga acgaggcgga gatgcggtca gggtttccgg
     4861 atgcgccact ggatctggcg tagcataccc atccagagct ctgcgtcctc atggttgagc
     4921 tgcatccgcc gaataaggcg acgcaccttc tcctcaactg cggattgggt atgcggttgc
     4981 gtgtagtcgg tttccagcaa gagctcaagc aataaatgag agattcgctc cagctgcccg
     5041 ctcgcggcaa gttcagagct tcgtggtttg ctcaacacgt cgggcgttcg atacgcgctt
     5101 agctgataga ggcagactgc cacagcctga cccaggttca tggagacatt ggtttccact
     5161 gtgggaatgc gcaagacttg ctggcagtaa gagagctctt cgtttttcaa gccgatcttt
     5221 tctgacccaa agagcacggc gactctgccg gaagcgagcg cctcgattaa ttccggcact
     5281 gccgacggga gatcgcgcag aggttggtgc agttcgcgat ttcggcctgc ggtggttccc
     5341 acaaccaggt tgcaatcggc caccgcatca gagacggagg aaaaattccg ggcagttttg
     5401 agcagctccg ttgctccgac cgccgagcgc gcctcgtcca gagatggagc ataggcttcc
     5461 accagccgca gatcagaaaa gccgaagttg ctcatggccc gcgctgcagc tccaatgttg
     5521 agcggattgc gcgtgcgaac cagcaccacg gagagccggc tgagtgcaga ggatacggtg
     5581 gtcaccatgt cagcccgcgg tggtcaaagg tttgactgcg ggccgctgcg gggtggggca
     5641 gcagcccggc tcgcaatgcg ccatcacagg agtggtctgg cactgcagga tcatctcgcg
     5701 caccatgctg gcgatcaacg gatgagggcc ggccgttccg gccctgacca tgcgcagccc
     5761 aagctcatcg catagagcgc gtgcttcggt gtcgaggtca tagagcacct ccatatgatc
     5821 ggaaataaag ccaatggggc agacaatcac gctgcgcacg cccgcagcat gctgcgctcg
     5881 aagataatcg cagatatcag gctcaagcca cggctgcgat ggtgggccgc tgcggctctg
     5941 gtagaccagg gcccactgtc gcatgccaca ctcccgcgcc accttttcac tggcaagctc
     6001 aagctgtcgc acgtagggcg aactctgcgc catgctgatg gggacgctgt gcgcggtgaa
     6061 gacaatctgc tctgcatccg gaagctgcgc cgaggcgctc cgcacgcgtt ccgccatgac
     6121 ttcaatgaac tctggccggt cgcagaagtt atccagcttc tcgataacca ggtcctgcgc
     6181 ggcggcctcc tcaagcgctg tgccgatgtc ctgacgatac tgcctgcatc ctgaataaga
     6241 tccgaatgcc gatgtggcca gcgcgactgc atggcgcaca ccatcgttgt gcatctgccg
     6301 gattgtgtca ccaaccagag gctgccaatt ccgattgccc caatagatgg gaagcttgag
     6361 gccgtgggat gcgaactcct gttccagagc tgcgatcaac gcgcggttct ggtcattgat
     6421 ggggctgcgc ccgccaaagt ggtagtagtg ctccgctact tccagcatcc gctcttgagg
     6481 tacgttcttt ccgcgcagca cgttttccag aaacggcagc acgtcttctt tcttctccgg
     6541 gccgccaaat gagatgacca gcagggcatg gaatgaggac ataaatgatc tcattctaga
     6601 gcacaggagc gccttggaaa gccgccgcga atggaaatag acgtgctcat ttttcggtaa
     6661 gaaagtttct ggctcgaaaa attctcccag gtaatacaca ttctttattg gctctagcag
     6721 cagtaaagcg tccactttat cgagacttcg cgggtcacag cgtgagatgg ctgagtgcga
     6781 ccgcagggcc ggagggtggg cattacagcg caaaagtttg cacactcatg ttgcgccggg
     6841 acgcgaaagg cacaacaggt gatttggcct tgagaaccgg aatgcccctt aagcaaccac
     6901 cagaaatttc gcctgacact gcggctgcgg cgggccgact cgccagggac gaatctttcc
     6961 aagtgctgac cctcggcacg gccgacgagc tctcatctca cgtggcagcc atcgaggatc
     7021 ttgcctgttc cgtcgtcgaa gcgaatgtct tctatgagcc ctggatgatc ttgcctgccc
     7081 tgaaagcttt cggcaagagc aagaacctga tcttcgtact gctctacctg caggggacta
     7141 acgaaagggg gggccagttg tgcgccttct ttccgtttga acggcgcacg cgattcgcgc
     7201 ggctgccggc gcgcacactg atcctgtggc aataccagga atgctacctc agtactccac
     7261 tactgcgccg cggatatgag ttgccggcaa ttcgtgctct ggtccagtgg gcgcgcaaca
     7321 gtcctatggg cgcggacgtt attgagggaa ttgagatggg cggcgatggc gtagttcatt
     7381 cgtcgctgtt gcggacgctg cagtcgctcg ggttgaagtc tctggctgcg tggcgtgatc
     7441 gtcctctcat ggtgccgcgg gcctcttgcg aagagtatat gcggcaggca atctccggcg
     7501 atcgacgccg ggtgctccgg tcgcggcaga gaaatcttga gaagctgggg cccatccact
     7561 acacggaacc gatggagacc actctggatt cgtggatcga taattttctg gatatcgagg
     7621 ccagcggctg gaaagggcgg caaaaagtag ctgcggtttg ccacgagaat acccgggaat
     7681 ttttccgcac cgtgatccgc gaagcttgtc gtcgtggccg ccttgaggca ttcaccctga
     7741 actgcggggc cgttccggtg gctgcgcgct gctcattcat ggcccggcct ggggctttcc
     7801 tgtacaagag cgcgtatcaa gagcagtatg cgcgctactc gcccggagca ctgctggagc
     7861 tagagcgcat tcgccgtgca cacgagaaca aggagatcca ctgggtagat tcctgtgtct
     7921 cggccagctt cgatcattat ctgccgtgga tcgaccgccg cagcatcgcc gatattgcat
     7981 ggagcacggg aacattgcgc ggcaatctga tcctgcggct tgctccattg gttcggcgcc
     8041 tgaaggagtg gcttgccaat cgtaaaccag ccgtgaatcc caagggagag ctggtcgctc
     8101 aaaaacctgc gcagctggcg ccgaagaacg tgcttgagat gccagtagat gcgacgagaa
     8161 aactcaaagc aggcggtggc gaatgactgc aaacatcgat ctgcgtgtaa gtgtggtgat
     8221 ccctacattc aaccgcgccg agctgctgaa gttctcagtg gattcggtgc tggccgctct
     8281 ggagcccggt gatgaagtga ttgtggtgga tgatggctca accgaccaca ctgagcaact
     8341 ggttgcgagc tttggttctc cagtccgata tctcaagact gaaaaccggg gagccggcgc
     8401 agcgcgcaat gctggtatcg ccgcggccaa tcacgacctg gtcgcgttca atgactctga
     8461 cgacgtgtgg ctacccaatc atctacggct tcagcgccag atcatggcgg cgcggccgga
     8521 cgtcctgttt tgcttcagca actttggtgg cattacggcg gaacaagagc acgttcacga
     8581 ttcactgggc tattggctcg aagaattcgg ctacagccgc acctgtccct gggaccgttt
     8641 gatcggcgcg ggcgtgccgt tctcgtcgat agggcagctt gcacagggcg aggctgactt
     8701 caaggtgcac ttgggcgata tctaccccac cgaactcgat ttcaattaca tctccgtgat
     8761 cacacttctg gtgcggcgca gagccgccgg caaggcattg cactttcccg aagatctcaa
     8821 ctggggagaa gactgggagt gcatggcacg gctctcacga gcggggctgg ctgcttatct
     8881 cgactgtgag acggccgagc agcgagtcca ttctggtccg cggcttacaa aagctgactg
     8941 ggtgaacaag gcggcacttc aattgaagct gatcgaaaga gtgtggggaa gcgatgccgg
     9001 tttcatgagg caaaaccgga gccgatatca ggcggctgcg gcgcgtattc atctggtcag
     9061 ggcgcgcgct ctgatcgtgc agggatccac cagtgaggca cgcgaggaac tcaggttggc
     9121 gggtgcagcg ccattttcct atcacgcact cgcagcgttg cccggatccc tggttcgcgg
     9181 actgctgaat gcgcgcaggg aagtgctggg gtgggtgcgg tgacccagac ctacccgatc
     9241 caagtggagg ttgtgcgcgg cggcatggag caattggacg cgcttgcccc tgagtggcgc
     9301 gctctgtgtg acataaacgc caaatcagaa cccttcgttc gtcctgagtt tattcgcgct
     9361 taccttaaag ccttcgaacc ggaagcatca ttggtcattt tcactgccag ttgccgtgga
     9421 gaattgctcg ccctgctacc gatgattgag gagaaggtcc ggttcgccgg ccttccggcc
     9481 cgcacattgc gcggcgcggc cggaacgcac tctgcacgct tcgatctggt ttgcgctcac
     9541 ggcgaagcag ggcagaaggc aatcgcagcc atctgggaag aactcaaaca gcagcacgat
     9601 tgggacatga tcgagcttcc actcatcgct gagccggctg aagcgcgaac gctggtggcc
     9661 atggcagccg aaagtggttt tccctcaggc tggtgggacg cgcatccggg tccgtacgtc
     9721 caaatcaatg gcgagaatcc tgacctggaa ccctggctcc aggcaacgag cgctaacttc
     9781 cgccagcgcg tgcgcaggtt gaggagaaaa gcccagacgg aaggcgttct cgaactcaaa
     9841 agctttagcc tgccaaatga tggcgtgctg gagaaattct acgcgcttga aagctccggg
     9901 tggaaaggga agcatggcac ggccattgtg tgcgatccca acacgcggca gttctacgat
     9961 gaagtggcgc gtgtggcggg cgagcaaggc tatttccgtt gctacttcct tacactcgaa
    10021 gaccgtgttc tggccggctt tctcggtctc tcagacggca agcggttctt catgctgaag
    10081 cctgcttaca atgaagagtt ctcgcactac tcgccggggc atctgctggc agcttcagtg
    10141 atcaaagact gtgccgagca tggtttccag gagttcgatt tcatgccgcc tgcgctccgc
    10201 tggaaaacgg actggagttc gcaggtgcgt cccagcggct acggttatat cttccgaaaa
    10261 ggcttttacg gcgagatgct ctggggcatg aagtttcggc tgcgtccatg ggccaagcag
    10321 gtggtcaact caatccgcaa gaaagcgagc tgagtctggc tcacttcgcc ttttccagca
    10381 ccagcgaaac attgatcttg ttgaagctga cccattcctt ctgcgatcgt gccgcgtcgc
    10441 gcaacgtaag ttctgccatc ggattgcccg gcctggactt gaagcgcacc gcggcatttg
    10501 tatccacttg aaggttcttc aggctcgatg gaacgtcttt ggcttcattc caggtcagcg
    10561 ccagataaac gcgcaatggc gcatagatct ccgggccagg acacaataga tgcacctgcg
    10621 gcttgttgtc cgcctggtat ttcacgatgg cgcaggaaat tgaagcatcc ttgctccgct
    10681 tgtaatcctc aacttcccac tttccgttgg tgggtttact gggaaagatc ggagcgttgg
    10741 aggttacagg aacatctgta catgcgggag agaagcagga tgctttctgc tccacaatga
    10801 cctgagcctg tgcggtgaca atgcataagg caaacaggga ggagatccag agggcgcgtg
    10861 acggcatgag aacccctttt cagcatggga ttccggtctc aa
//
LOCUS       DASQYP010000354         4181 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_15946, whole genome shotgun sequence.
ACCESSION   DASQYP010000354 DASQYP010000000
VERSION     DASQYP010000354.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 4181)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4181)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4181
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_15946"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..589)
                     /locus_tag="VE783_11550"
     CDS             complement(<1..589)
                     /locus_tag="VE783_11550"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX54077.1"
                     /translation="MNPNPPEMQQEPLQVPQAPVPPAPVAFNGVPAELPATVPHPLTG
                     SVVDFADVLTVSTIAFLGLVISNVAIGAIFVIRNGGRPLAVAELTSNVFFLILVQLCG
                     YAIAGAGMAFLVSVRHRTEFWTGISWNTPSSRGNAAAWFGGGAFLGLLSLIASNVLEP
                     WIPKSLPINELFRTTSAAYILTAFGVLVAPLVEELF"
     gene            complement(825..3617)
                     /gene="uvrA"
                     /locus_tag="VE783_11555"
     CDS             complement(825..3617)
                     /gene="uvrA"
                     /locus_tag="VE783_11555"
                     /EC_number="3.1.25.-"
                     /inference="COORDINATES: protein motif:HMM:NF001503.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006289 - nucleotide-excision repair
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrA"
                     /protein_id="HYX54078.1"
                     /translation="MPISNITVRGARQHNLKNISVEIPRNTLTVITGLSGSGKSSLAF
                     DTIYAEGQRRYVETLSAYARQFLDQMERPDVDSIDGLSPAISIEQKTTSRSPRSTVGT
                     ITEIYDYLRLLYSSVGVPHCPNCGKPITRQSAEQIVQRVMQLKAEERVMVMAPLVRGR
                     KGEFKQELAKLAQHGFVRARIDGELRHLDEELDDIQLDKRKNHTIEVVIDRLLVKPGI
                     EKRLEQSVATAMKLGNGLVQVAVVGGEEQLYSARMACPDCGINIPALEPRSFSFNSVY
                     GACTECNGLGSKYDFDPAKVVVDWSKPLMDGALGPGSGSSYLQRMVELVAAAYKIDLS
                     TPFEKLAQKYQTLLLYGPEEKEAPKLGFRGVLGFLKQNLEESTSDSYREWLLGYMSAT
                     QCPVCHGRRLRPESLAVKVNGLSIADFTWLPVARAVDVAAKIELSERERIIAARVLHE
                     IRERLQFLNAVGLGYISLNRSAATLSGGEGQRIRLATQIGSRLRGVLYVLDEPSIGLH
                     HRDNNRLLQALESLRDLGNTVLVVEHDEETIRRADYVIDLGPGAGLHGGEVVAAGTPA
                     QITGEAGSLTGQYIAGKRSIATRFEPRATNGKAVTILGARENNLRSVDVTFPLGVITV
                     VTGVSGSGKSTLVNDILYKALAKRLYRSREEPGAHKSISGFEHIDKVIRIDQSPIGRT
                     PRSNPATYTGVFTHIRDLYAMLPESRERGYKAGRFSFNVSGGRCEHCQGEGERRIEMN
                     FLPDVYVLCEVCGGKRYNAETLAVKFKDRSIADLLEMAVSDVLPILEDIPQIRQRLQT
                     LEDVGLGYIKLGQSAVTLSGGEAQRMKLAKELSKRQTGRTLYLLDEPTTGLHFEDVSK
                     LLEVIHRLTDLGNSVIIIEHNLDVIRNADWIIDLGPEGGEDGGRIVAQGTPDQVSKIK
                     KSFTGQALTEYLKARK"
     gene            3921..4106
                     /locus_tag="VE783_11560"
     CDS             3921..4106
                     /locus_tag="VE783_11560"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX54079.1"
                     /translation="MRTVLASSTVLITIALSLAFGIACGYAVIYGILHAFAVRRENAK
                     AVATAPATAVIAGLGGR"
BASE COUNT          872 a         1315 c         1121 g          873 t
ORIGIN      
        1 agaaaagttc ttccaccaga ggcgccacca gaacaccaaa ggctgtgagg atgtatgcag
       61 ccgaggtcgt gcggaagagc tcattaatag gcagcgattt gggaatccac ggctccagaa
      121 cattcgaagc aatcaatgac agcaggccca gaaaagcgcc cccgccaaac catgcggcag
      181 catttccgcg agatgatggc gtattccagc taatccccgt ccaaaactct gtccggtgcc
      241 gtacggaaac aaggaatgcc atcccggccc cagcgatcgc ataaccgcac aactgcacca
      301 ggatcaagaa gaacacgttg cttgtgagct ctgccacggc cagcggtctg ccgccattgc
      361 gaattacaaa gattgcacca atcgcgacat tgctgatcac cagtcccaga aaagcgatgg
      421 tcgaaactgt tagaacgtca gcgaaatcca ccacgctgcc ggtcagcgga tggggcacag
      481 ttgctggcag ttcggccgga actccgttga atgcaaccgg agcaggcgga accggagctt
      541 gcggcacttg cagtggctcc tgctgcatct caggcggatt ggggttcatt gcgtccaagc
      601 aaagctctgg cgggcgcgcg tctcttccaa tgtatcagtg aagttttcca agagaaaatt
      661 aaaggggtgg cgtagcgttg gaagccaaag tgtgccaccc cttatttgtg cccaggtata
      721 aggagaaggt tgaacacact ctaagctcaa aatgagaaag tcaaacttct tgcgaatttt
      781 tttctgaaat ccgaacacgc tgacttaatt tcctttaatt tctgctattt gcgcgccttc
      841 aaatattcag taagagcctg cccagtgaat gacttcttga ttttagaaac ctggtctggc
      901 gttccctggg ccacaattcg cccgccatcc tcgccgcctt cagggccaag atcaatgatc
      961 cagtctgcgt tgcggatcac gtcaagattg tgctcaatga tgatcacgga attcccaaga
     1021 tccgtgagcc gatggatcac ttccagcagc ttgcttacgt cttcaaagtg caatccggtc
     1081 gttggctcgt ccagcaggta aagcgtgcgt cccgtttggc gcttggaaag ctccttggcc
     1141 agcttcatgc gctgggcttc gccgccggag agcgtgactg cggattgccc cagcttgatg
     1201 tagcccagtc ccacgtcttc cagcgtttgc agccgctgcc ggatttgcgg gatgtcttca
     1261 agaatcggca gaacatcact taccgccatc tccagcaaat cggcgattga ccggtctttg
     1321 aacttcaccg ccagggtttc cgcgttgtac cgcttcccgc cgcaaacctc gcacagcaca
     1381 tagacgtccg gcagaaaatt catctcaatg cggcgctcac cttctccctg gcagtgctcg
     1441 catcgaccgc cggagacgtt gaaggaaaag cgtcccgcct tatatccccg ctcgcgcgat
     1501 tccggcagca tggcatacag atcgcggatg tgggtgaaca ctccggtgta agtggccggg
     1561 ttcgatcgcg gcgtcctgcc gatcggcgac tggtcgatgc ggatcacctt atctatatgc
     1621 tcgaacccgg aaatgctctt gtgcgctccg ggctcttcgc gtgaccgata gagccgcttg
     1681 gccagcgcct tgtacagaat gtcattcacc agagttgact tgcccgagcc gctcactccc
     1741 gtcaccactg tgatcacgcc cagcgggaag gttacatcca cactgcgcag gttgttttcc
     1801 cgcgccccca gaatcgtcac cgccttaccg ttggtggcac gcggctcaaa gcgcgtggcg
     1861 atgctccgct ttccggcaat gtattggccg gtgagcgaac cagcttcccc ggtgatctgc
     1921 gccggcgtgc ccgcggccac cacttcgccg ccgtgcagcc ccgcgccggg gccaaggtct
     1981 atcacgtaat cagccctccg gatggtctct tcatcgtgct ccaccaccag caccgtgttt
     2041 cccaaatcgc gcagtgactc caaagcctgc agcagccggt tgttatcgcg atggtgcagc
     2101 ccaattgagg gctcatccag cacgtacagc acgccacgca accgcgaacc aatctgcgtt
     2161 gccagccgga tccgctggcc ttcgccgccg gaaagcgttg ccgccgagcg attcagcgag
     2221 atgtagccca accccacggc gttcaggaac tgcaggcgtt cgcgtatctc gtgcagcact
     2281 cgtgcggcga tgatgcgctc gcgttcgctc aactcaatct tggctgcaac gtccacagcc
     2341 cgtgccaccg gcagccaggt aaagtcggcg attgagagcc cgttgacttt caccgccagg
     2401 ctctccggcc gcagccgcct gccatggcac accggacact gcgtggctga catgtatccc
     2461 agcagccatt cgcgatagct gtcggaggtc gactcctcca gattctgctt caggaacccg
     2521 agcaccccgc ggaagccgag ctttggggct tccttctctt ccggcccgta aagcagcagg
     2581 gtctggtact tctgcgccag cttctcaaac ggcgttgata aatcgatctt gtaggccgcg
     2641 gccacaagct ccaccatgcg ttgcaggtag ctcgatccgg accccggacc cagtgcgccg
     2701 tccatcagcg gctttgacca gtccacaact actttggccg ggtcgaagtc atatttgctt
     2761 cccaggccgt tgcattccgt gcacgcgcca taaacgctgt tgaatgaaaa cgatctcggc
     2821 tccagcgccg gaatgttgat gccgcaatcc gggcacgcca tgcgcgccga ataaagctgc
     2881 tcttcacccc cgaccaccgc cacctgcacc aacccgttgc ccagcttcat tgccgtggcc
     2941 actgactgtt ccagccgctt ctcaatcccc ggcttcacca gcaggcgatc aatcaccact
     3001 tcaatcgtgt ggtttttgcg cttatccaac tggatgtcgt ccagctcttc gtccagatgg
     3061 cgaagctcac cgtcaatgcg ggcacgcaca aagccgtgct gcgccagctt ggccaattcc
     3121 tgcttgaatt ctcccttgcg gccgcgcacc agcggcgcca tcaccatcac gcgctcttcg
     3181 gctttgagct gcatcacgcg ctgcacaatc tgctccgcgc tctgccgggt gattggctta
     3241 ccgcagttcg ggcaatgcgg cacacccact gatgaataga gcaagcgcaa atagtcgtaa
     3301 atctcagtga ttgtcccgac tgtcgacctt gggctgcgcg atgtagtctt ctgttcaatg
     3361 gagatggcag ggctcaggcc gtcgatcgaa tccacgtccg ggcgctccat ctggtccaga
     3421 aactggcgtg cgtaggcgga aagcgtttcc acgtaccggc gctggccttc cgcgtaaatc
     3481 gtgtcaaagg ccagggaaga cttgcctgac ccgctcagtc cggtaatcac cgtgagcgtg
     3541 ttgcgcggga tttccactga gatgtttttc aggttgtgct ggcgggcgcc gcgcacagtg
     3601 atgttactga tcggcatgta tggcttaggg tcccttgcac tcaacgcact gcaaccccta
     3661 cagaacggtc cggagaggtg aatacgcagc tctactccgt atgttatcgg cggcagggca
     3721 gcacggtcaa tgttgggcga aagcgtgaat ggttgcccat gtaagggcaa tcacttacgc
     3781 cggcgatgac caaggcgcag cagcccctta cttcagggca gtgccagcgg taatcgagac
     3841 aataaacaga aggtgaagca caatcacagt cgccgggtaa ccggcaagaa acagaaccca
     3901 tctaagaagt agtcgaaacg atgagaacag tcctggcatc ctccaccgtc ctgatcacca
     3961 tagcactctc cctcgccttt ggaatcgcct gcggctacgc cgtaatttat ggcatcctgc
     4021 acgccttcgc cgtccgtcgg gagaatgcca aggcggtcgc aactgccccg gccactgccg
     4081 ttatcgccgg cctcggcggg cgatagcaac ccggatttca tccggccctg ccggggacac
     4141 cattcagtcc ttgcagccga ctgcgcatcc gaaaatttcg c
//
LOCUS       DASQYP010000355         5252 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_124477, whole genome shotgun sequence.
ACCESSION   DASQYP010000355 DASQYP010000000
VERSION     DASQYP010000355.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 5252)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5252)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5252
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_124477"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1381
                     /locus_tag="VE783_11565"
     CDS             <1..1381
                     /locus_tag="VE783_11565"
                     /inference="COORDINATES: protein motif:HMM:NF013508.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="fibronectin type III domain-containing protein"
                     /protein_id="HYX54080.1"
                     /translation="FVSASATANAAMVNWVPTPNGQALSTYVVRTLLAGGSPSGIADV
                     TVNPGANGTLPTSVSITGLANGVAVEFVVQACNASGCSAFSAPSGVVTPQQLTIPAAP
                     SGVVATAGNKAATIAWTAPANTGGSPLISYTITANPGALVLTVPATQTGANFTGLTNG
                     STYTFTVHATNASGNSVESPASNAVTLLVVQAVDIGISMTAPASANAGAFVTFTMTLA
                     NNGPGDAAMVTLTDTLPGTFVSSSTTQGVCAQNVATFTCNLGGLLAGAKAVVKVTVAA
                     GNQAITNTASVQLRDAFGNLINETVGANNVASATININPPVGGGGGGGVGVGGAGASA
                     DVQVTGSARNGGPNAGTGDTFVWQIKNNTGNATAQNVVFTLQLPSNFQFLDAAASQGT
                     CSGISQGSTGGTLTCNLANLPGGQTMLVNVDFVPLIAGTFSATGSATFGGTDTQTTNN
                     SFSVTIRPR"
     gene            2000..4078
                     /locus_tag="VE783_11570"
     CDS             2000..4078
                     /locus_tag="VE783_11570"
                     /EC_number="1.11.1.5"
                     /inference="COORDINATES: protein motif:HMM:NF015131.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c peroxidase"
                     /protein_id="HYX54081.1"
                     /translation="MSGEFKRRLLALICCAAIVSNALGSGSGKGSGGGGNSGGGSGSG
                     SGSSSSGGSGGSGRGGGGGNDDTANNNNAAQGGGQIQGFERKLGSLRTVAVPGPTDAE
                     LGDVVRNKAAAIALGKAFFWDMQFGSDGFTACATCHFNAGADSRTMNQTDPGLRRVDG
                     AGNSSADSTTYVPGFGPNHQLAFSDFPLHKLADITRSNSAVLSDNNNIVGSQGVFKND
                     FNDVVLGLGPEDETPSPDSVFSIRDMAGNPMNVRRSTPRNAPPVINAVFNYRNFWDGR
                     AQNIFNGVNPFGTGDPNAALLQTDSVDPNTVHEVKLHLSNSALASQAVGPPGSDVEMS
                     ATGRPFVKMGKKMLSVTPLVLQQVSLNDSVLGSYSAAPFTGLNTDYVTMVQAAFQPKW
                     WNSNVVVDKDSNFVRLGRPQSTDEYSQMEYNFSMFWGVAIQMYESTLVSNQSRFDQFI
                     EGNRGALTALEQRGLDRFQGKGGCTNCHNGAEFTDIAISNISRRGLVEKLANGSWHDV
                     GFHNIGLRPVNDDLGIAAGDPSGLASLSAAQLASLGQLTGTAVPVGAPVSVRGAVKTP
                     SLRNVELTAPYFLNGGQATLDQLVDFYSRGGDFPSADVDPSLKRAGFSADDKAAVVAF
                     LKSLTDERVRSQSAPFDHPSLIVPNGIVLNNGVLLEQTITIPATGASGGAPLQKFCEG
                     LAGGPGQGCN"
     gene            complement(4573..>5252)
                     /locus_tag="VE783_11575"
     CDS             complement(4573..>5252)
                     /locus_tag="VE783_11575"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX54082.1"
                     /translation="QTAPVYSSEEGEVKMKRLLLVTLLNLSLSVPVALTAQTTVFKFN
                     QDGEFASFSQSTDQNSSISLSVSRNFSTGTATTASISYVAFTFDTANNLLTVSQVVGS
                     IPAGDFTGQNVQNLTLSFNTGDLDPTTSFSQTCVIDLTNTANTTCGAGPTGSISVSFT
                     QNGATRTRVLALGEEVTVGNFTTRIHQRSDNASANVSGSVFGTSVSGGGATVGINHNS
                     SLEFVRN"
BASE COUNT         1107 a         1534 c         1520 g         1091 t
ORIGIN      
        1 gttcgtttcg gccagcgcca cagccaatgc ggcgatggtg aactgggttc cgaccccgaa
       61 cggccaggct ctcagcacct atgtggttcg caccctgctg gctggcggtt ctccttctgg
      121 tattgccgat gtgacggtga atcccggagc aaacggaacg ctgccaactt ccgtgagcat
      181 cacggggctg gcgaacggtg ttgccgtgga gttcgtggtg caggcgtgta acgcaagcgg
      241 ctgcagtgcg ttctccgctc ccagcggtgt ggtgactcct cagcagctca ccattcctgc
      301 agctccatcc ggagtggttg ctacggcagg gaacaaagcc gcgaccattg cctggactgc
      361 gcctgcaaat accggaggct cgccgctgat cagctacacc atcacagcga atccgggcgc
      421 gctggtgctt accgttcccg caactcagac cggcgcaaac tttaccggcc tgaccaacgg
      481 cagtacttac actttcaccg tgcatgcaac taacgcatct ggcaacagcg tggaatcacc
      541 ggcctctaac gcggtcacgc tcctggttgt acaagcggtg gatattggaa tttccatgac
      601 ggcgccggcc agcgcgaatg ccggagcgtt tgtgaccttc accatgaccc tcgccaacaa
      661 tggccccggt gatgccgcga tggttacgct caccgatacg ctgcccggaa cattcgtctc
      721 ttccagcaca acccagggtg tctgcgcaca aaacgtagct accttcacct gcaacctagg
      781 cggattgctc gccggggcaa aggctgtagt gaaagtgacg gtcgcagcag ggaaccaggc
      841 catcacgaat acggcctcag tccagttgcg agatgcgttc ggcaacctga tcaatgaaac
      901 agtaggcgcc aacaacgttg ccagtgccac aatcaacatc aatccgccgg ttggcggagg
      961 cggtgggggt ggcgtcggag ttggcggagc cggagcgagc gccgatgttc aggtaactgg
     1021 atcagcccgc aatggcggac ccaacgccgg caccggtgac acgttcgtct ggcagatcaa
     1081 gaacaacaca ggaaacgcga cagcacaaaa cgtggttttc acgcttcagt tgccgtcgaa
     1141 tttccaattc cttgatgccg ctgccagcca gggcacctgc agtgggattt cgcagggaag
     1201 caccggcgga acgctcacct gcaacctggc aaacctgccc gggggccaaa ccatgcttgt
     1261 gaatgtggat ttcgtcccct tgattgcggg cacgttctcc gccacaggtt cggcgacctt
     1321 cggcggtacg gacacgcaaa ccaccaacaa ctcgttctct gtaacgattc ggcctagata
     1381 aggccggaaa cggctgcctg cttctgcccg aagaagcagg cagctattct cgatctcata
     1441 accaggaaca attcaagttt tggtttcctg cgccatagcg atttccctgt gacggacagg
     1501 ggctgagagg tcgccatgga ccctcgcggg agcctggaag ttgggtattc ccccgctaga
     1561 gtacccaact tcaccctttc cctcggcgag cgctgagaac cagatcctgc aacgatggcc
     1621 gcgcgctgta ggcgcagtga gccggaggcg aaatgtcgcc ccggccactg ctttttttat
     1681 ggactgtctt tttcttcccg ccatgaatgg aaatcgggtt ccactccggc tctggaaccg
     1741 aacttccacc gcctccattt ttcgctgatt ttcccgaccc tgagttttcg agagaatggt
     1801 tcataaacta ttgcaagata aactatttac gcgaatgttg cgtccgcccc aggcgtggct
     1861 cgtcccgcct ttccctcgtg gcattacaga tgcttttctg gagagcgttc attgcattga
     1921 cgcgcgatga atgcgatcga ccagccgggc gcttgaactc ggctggtctt ccaaaattcg
     1981 tacggaggaa gttatgtgga tgagcggcga atttaagaga cgactactcg cgctgatatg
     2041 ctgcgcggca atcgtctcca atgccctggg atcaggctca ggcaaaggta gtggtggcgg
     2101 cggaaacagc ggcggcggct ccggttccgg aagcggaagc agctccagtg gtggcagcgg
     2161 tggaagcggt cgcggcggcg ggggcggaaa tgatgacacc gccaacaata acaacgcggc
     2221 gcagggcggc ggacagatac aggggtttga acgtaagctt ggttcgctgc gtaccgtggc
     2281 tgttcctggg ccgaccgacg ctgagctagg tgatgtagtc cgcaacaaag cggccgccat
     2341 tgcgctgggc aaggctttct tctgggacat gcagtttggc agcgacggat tcacggcttg
     2401 tgccacctgc cacttcaatg ccggcgcaga cagtcgcacc atgaaccaga ccgatccagg
     2461 acttcgccgt gtagatggcg ccgggaactc atcggcagat tccaccactt atgtgcctgg
     2521 tttcggaccc aatcaccaac tggctttctc tgatttcccg ctgcacaagc tggctgacat
     2581 aacgcgttcc aactcggccg tgctgagcga caacaacaac atcgtaggct cacaaggcgt
     2641 gttcaaaaat gatttcaatg acgtggtgct tggtctgggt ccggaagacg aaacgccttc
     2701 cccggacagc gtgttcagca ttcgcgacat ggccggtaat cccatgaacg tgcggcgctc
     2761 cacgccacgc aacgctccgc cggtgatcaa tgcagtcttc aactatcgca acttctggga
     2821 cgggcgcgcg caaaacatct ttaacggcgt gaatccgttc ggtacgggcg atcctaacgc
     2881 tgcgttgttg cagaccgact ccgtggaccc gaataccgtg catgaagtca aactgcacct
     2941 gtctaactcc gcactggcct cgcaggccgt ggggccgccg ggaagcgacg tggagatgtc
     3001 tgccactggc cgtccgttcg tgaagatggg caagaagatg ctctcagtca cgccgctggt
     3061 cctgcagcag gtctcgctga atgacagcgt tcttggcagt tacagcgcgg ctccgttcac
     3121 cgggctcaac acggattacg taacgatggt gcaggcggca ttccagccga aatggtggaa
     3181 ttccaatgtg gtggtcgaca aggacagcaa ctttgttcgc ctcggccggc cacagagcac
     3241 tgacgagtat tcgcagatgg aatacaactt ctccatgttc tggggcgttg ctatccagat
     3301 gtacgagtcc acgctggtct ccaatcagtc acgctttgac cagttcatag aaggcaatcg
     3361 cggcgcgcta acggcgctgg agcagcgcgg ccttgatcgc ttccagggga agggaggctg
     3421 caccaattgc cacaacggag cagagtttac ggacatcgca atctcgaaca tctcccgccg
     3481 tggcttggtg gaaaagctgg ccaatggctc atggcacgat gttggcttcc ataacatcgg
     3541 gctccggcct gtgaatgatg accttggcat agccgctggc gatccctccg ggctagcttc
     3601 gctctcggct gcgcagcttg cctcactcgg tcagcttacg ggcacggctg ttccggtcgg
     3661 tgcgccggtc tcggtgcgcg gagcggtcaa gactcccagc ctgcgcaacg tcgaactcac
     3721 ggcgccctac ttcctcaatg gcggccaggc cacactggac cagctggtgg atttctacag
     3781 ccgtggcggt gatttcccct cggctgatgt tgatcccagc ctgaagcgcg ccggcttcag
     3841 cgccgatgac aaagctgccg tggtggcatt cctcaagtca ctcaccgatg agcgcgtcag
     3901 gtcgcagagc gcgccctttg accatccctc attgatcgtt cccaacggca ttgtcctgaa
     3961 caacggcgtg ctgctggagc agacgatcac cattcccgcc accggcgcct caggcggagc
     4021 gcctttgcag aaattctgtg aaggtctggc gggaggccct ggccagggct gcaactgagc
     4081 cgctgaacca cgatcggcgt gttgtaaacg ctcgcaacac gccgacggct cacacccaat
     4141 tttcttcagg atctgtacga cagagccagc cacagactcg gtaactgctc accaagtcca
     4201 tcctcgaaac aactggctct gataaggact gagaggctca ccccgggcct cagtccttcc
     4261 gaattcagaa tggaaggagg tacggcggcg gtaaaaacga tgaaaaataa tgccttcctg
     4321 aaaatcagct cagagaaaag gaccggctac gctctcctgc gttgccggtc catattgtgt
     4381 agatagaccc ctccagacgg cgcgcacgcc atactccacc ttctagatga ttgtcacgac
     4441 tgcttcgctc atctgcacat ggctgaggcg cgccaacgct tgcgccaggc ggttacgatg
     4501 tgctcgagtt ttccgtcggc cggggaaagc tgatattcac gcaacaactc agggccgctt
     4561 ttgaaacggt tgctaatttc tgacgaactc caggctggaa ttgtggttga ttccaaccgt
     4621 cgcaccgcct ccggagactg acgttccaaa aacagagcca gacacattag cgctggcatt
     4681 atcggaccgc tggtggatgc gcgttgtgaa gtttcccacg gtgacttcct cacccagagc
     4741 caacacgcgt gtgcgcgtcg ctccattctg agtgaagctg actgagatgc tcccggtggg
     4801 tcctgcgccg caagttgtgt tggccgtatt cgtcaaatcg ataacgcagg tttgactaaa
     4861 ggatgttgtg ggatccagat cgccggtatt gaaactcaga gttagatttt ggacattctg
     4921 gccggtgaag tcgccggcgg gaatggaacc cacaacctga gagacggtga gcagattgtt
     4981 ggcggtgtcg aacgtaaaag ccacgtagga aatgcttgca gtcgtcgccg ttcccgtact
     5041 gaagttgcgg gagacactca agctgatgct ggaattctgg tccgtggact ggctgaagga
     5101 cgcaaattcg ccgtcctggt tgaacttgaa cacagtggtc tgggctgtca gtgcgacagg
     5161 tacagacaat gagaggttta gcagggtaac caacaagaga cgcttcattt ttacttctcc
     5221 ttcctcgctt gaataaacgg gagcagtttg gg
//
LOCUS       DASQYP010000356         8643 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_140886, whole genome shotgun sequence.
ACCESSION   DASQYP010000356 DASQYP010000000
VERSION     DASQYP010000356.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 8643)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8643)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8643
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_140886"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(96..539)
                     /locus_tag="VE783_11580"
     CDS             complement(96..539)
                     /locus_tag="VE783_11580"
                     /inference="COORDINATES: protein motif:HMM:NF014668.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006282 - regulation of DNA repair
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="regulatory protein RecX"
                     /protein_id="HYX54083.1"
                     /translation="MAELKRLMRQRTTDEKMIDGIILVLKEQKYLNDSAYASAYSSLR
                     RDNAKFGRRRVITDLKVKGVHGDLIEKAVQEAFTDVNEEQQARAFLQRKRLKEPTNEK
                     EAARIFRALMRAGFGSGTAVRILKNWKVDDEVLTALQEEDTQAES"
     gene            complement(762..1889)
                     /locus_tag="VE783_11585"
     CDS             complement(762..1889)
                     /locus_tag="VE783_11585"
                     /inference="COORDINATES: protein motif:HMM:TIGR01420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0043107 - type IV pilus-dependent motility
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type IV pilus twitching motility protein PilT"
                     /protein_id="HYX54084.1"
                     /translation="MHIDDLLRIAMERKASDLHLKVGNYPHVRVDGELVPLTDQPRIS
                     AEDMLNMAFSMMSNRQKQKFKESAELDMAYGVAGLGRFRVNVFQQRGNVGLVLRVIPT
                     KIRALEELYLPKVIEHVCEEARGLCLVTGVTGSGKSTTLAAMLDRINSSRPEHIITIE
                     DPIEFLHRDKKGFVNQREVEVDTPSFASALRASLRQDPDVILVGEMRDLETISTALHA
                     AETGHLVFSTLHTLDAVETINRIIAVFPPPEQKQVRMQLGATLRAVVSQRLVKRADGA
                     GRVPACEVLISTAFVRECIMVPEKTRMIHEAIAAGTSQYGMQTFDQSLYDLYSQGLVS
                     YETALENASNPDDFKLKVQGIHSTADAAREQMEQAGFSAGR"
     gene            2098..3462
                     /locus_tag="VE783_11590"
     CDS             2098..3462
                     /locus_tag="VE783_11590"
                     /EC_number="1.6.5.-"
                     /inference="COORDINATES: protein motif:HMM:NF019604.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HYX54085.1"
                     /translation="MTQNDKFARVVVVGAGFAGLNAAKALANAAVQVTVLDRKNHHTF
                     QPLLYQVALAALSPAEIASPIRNVLRGAKNTEVLLGEVSAFDLERRVVTTHAAGDSDA
                     LEIPYDYLILAAGATHAYFGHAEWEQYAPGLKTIEDATEIRGRVLLAFEHAEREAFAH
                     NVTPQLNFVVVGAGPTGVELAGAISDISREYLQKDFRTIDPSKSRIILIEGGPRVLAA
                     YPPDLSASAQKQLEEMGVEVRTGAMVTNIELGMVTVGKEKIAAAVILWGAGVSASPLG
                     RMLGVPVDRAGRVLVEQDLTIPGHPEVFIIGDLAAAEEPGETAQSRPGATVSDEDKHT
                     KYVPGVAPAAIQMGKFAARQIRRSVNGEAREVFRYRDKGSLATIGRSHAVGDLGRFHI
                     SGYFAWLAWLFIHLFFLIGFRNRIMVMMEWAWAYISFNRSARLITEPKESVMEEERPV
                     ARVG"
     gene            complement(3573..5021)
                     /locus_tag="VE783_11595"
     CDS             complement(3573..5021)
                     /locus_tag="VE783_11595"
                     /inference="COORDINATES: protein motif:HMM:NF018269.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="di-heme oxidoredictase family protein"
                     /protein_id="HYX54086.1"
                     /translation="MFVCSLVAVSLLLGMSTLPAHAQNNPLAIDPGPRPGPQPPSGAG
                     NPIPGLPPDQVTFWFDALNLFGESVSVKGTLNGEPLAGLGPAFNGNSCLLCHSQPVIG
                     GSSPTPNPQIGVANLDNASNIIPSFVTQNGPVVEARFIKNPDGSLDGGVHDLFTITGR
                     VDAPNGCALQQPDFATQLKNGNVTLRIPIPTFGEGFVENASEDILNQNLALLAAAKAT
                     LGIKGRFNTSGNDGTITKFGWKAQNKSMLMFSGEAANVEMGVTNELFTNERTNGGCAT
                     NPTPEDNTHVIIPTGGNAGNDASQISSLIENFTIFMRLNAAAVPCDFFTSQNSCQPLG
                     DSAKRGQALFGTVVPSVSGGTANTGIGCVLCHTDSLHTAKSNLTPLSQVEFHPFSDFA
                     LHHMGAGLADGVNQGQAGSDEFRTAPLWGVGQRLFFLHNGMTNNIVSAIELHASTCAT
                     GQVCSEANQVINKFNALTQQQQQDLVNFLRSL"
     gene            5393..5629
                     /locus_tag="VE783_11600"
     CDS             5393..5629
                     /locus_tag="VE783_11600"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX54087.1"
                     /translation="MVPNLGPGEIQPPRPGKGKTKGRRELMSDKREENRVLSRTGARQ
                     IKQDELNKVTGGRNTRLSQIITGSSSDPDTGFDT"
     gene            5743..5895
                     /locus_tag="VE783_11605"
     CDS             5743..5895
                     /locus_tag="VE783_11605"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX54088.1"
                     /translation="MESNNENRVLMRMGARNLSENETDQVTGGLIPTLLSVIFTNGGT
                     DHSLDS"
     gene            5977..7122
                     /locus_tag="VE783_11610"
     CDS             5977..7122
                     /locus_tag="VE783_11610"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX54089.1"
                     /translation="MKILLLAHEKDDHAAPVRWALTQARYEAECRGGVSAAVGEHASL
                     FLTPGVFNPGMFNSSGISNPEVFSAANCKLEPAVVLGKMVVKRGDTVWFRQPALDLEQ
                     SQSSKFSSFWNEIVAIFELLPARCVNKPSASKLVTNKAVQLRLAGEAGLRVPETVMSN
                     APTAVRELFDRYSEGAVCKPFVPHIWQRQGLKGAAVAETFTLTRAQLPANEVFTYAPA
                     IYQRRIQKQLDVRAVLLGNRVYSFALRTPGNALDWRFDAARRNLDVEMVATPADVEKA
                     LLSFAEDSGVCFGSVDFAVDQRGDWWFLEINEQGQFLWLEEFCPRAALLQKFCAFLTA
                     DEHTAESLEAREQLFPSLADYDRAHPQREHLDFTHASADSSFKSVEP"
     gene            complement(7357..8313)
                     /locus_tag="VE783_11615"
     CDS             complement(7357..8313)
                     /locus_tag="VE783_11615"
                     /EC_number="2.6.1.42"
                     /inference="COORDINATES: protein motif:HMM:NF005146.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004084 - branched-chain-amino-acid
                     transaminase activity [Evidence IEA];
                     GO_process: GO:0009081 - branched-chain amino acid
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid transaminase"
                     /protein_id="HYX54090.1"
                     /translation="MAIQATEKIWHNGKFIRWEDATMHVMSHVINYGSSVFEGIRCYS
                     QPEGPAIFRLREHMQRLLDSAKIYRIETPFSLDQLCEAACDLVATNGVWPCYVRPIVM
                     RGYGEAGVNPFNSPTEVYMTNYPWGKYLGKGDVSEGVEACVSSWSRIAPNTMPAMSKA
                     GANYMNSQLIKMEAIVNGYVEGIALDVNGYVSEASGANIFIVRRGKLMTPPLGNSVLP
                     GITRDAILTLAQDIGVEVIEQMIPREMLYISDEVFFCGTASEITPISTIDKIKVGTGI
                     TGPVTLALQREFFGIVNGKSKDRHGWFTPVPVKNHSKQPVGV"
BASE COUNT         1801 a         2323 c         2650 g         1869 t
ORIGIN      
        1 agacagttag actcggcatg ccgcgtctgt acgcctggat tttgggaagc ccttcgaatg
       61 cactagaggc ttgaaatgca gtaaaaaaag ggctgttaac tctcagcttg cgtgtcttct
      121 tcttgcaaag cggtcagcac ctcatcatcc actttccagt ttttgaggat acgcactgcc
      181 gtgccggagc cgaagccggc gcgcatgagc gcacgaaaga tgcgggcggc ttccttttca
      241 tttgtcggtt ctttaaggcg tttgcgttgc aggaaggcgc gggcctgctg ttcttcattt
      301 acgtcggtga aggcttcctg aacggctttc tcgatcaggt cgccatggac gccctttact
      361 ttcagatcag tgatcacgcg gcggcggccg aatttggcat tgtcgcgacg caaactggag
      421 taggcggagg cataagcgga gtcgttcagg tacttctgtt ctttcaggac gaggataatg
      481 ccgtcgatca ttttttcatc cgtggtgcgc tggcgcatca ggcgcttgag ttcggccacg
      541 gagcgcattt ttcgtgtgag cgcgccgatg gcgtagttgt agagatcgag ttcgttgtag
      601 gtctttttag tcttgcggaa aggcacgggg aaagaatagc agaaatgggt ttagccgcga
      661 atgaacgcga atgcacacga atgaagaagg gggccaactg gcccccttga gtatcgttgc
      721 tatagggttc cctcgcttcg ctcgggacaa ggcaacaaca actaccttcc cgcgctaaac
      781 ccggcctgtt ccatctgctc gcgggcggcg tcggcggttg agtggatgcc ctgcaccttg
      841 agtttgaagt cgtcagggtt gctggcgttt tcaagcgcgg tttcatagct gaccaggccc
      901 tgcgagtaga ggtcgtagag tgactggtca aaggtctgca tgccgtactg cgaggtgccg
      961 gcggcaatgg cttcatggat catgcgggtt ttttccggca ccatgatgca ctcgcgcacg
     1021 aaggcggtgg agatcagcac ttcgcaggcg gggactcggc ctgcgccgtc agcgcgcttg
     1081 acaagtcgct gcgagacaac tgcgcgcagc gtggcgccaa gctgcatgcg cacctgcttt
     1141 tgctccgggg gcgggaagac ggcgatgata cggttgatgg tttccacggc gtccagggtg
     1201 tgcaacgtcg agaagacgag gtggccggtc tcggcggcgt gcagcgcggt ggagatggtt
     1261 tccaggtcgc gcatttcgcc caccaggatt acgtccgggt cctgacgaag gctggcgcgc
     1321 agtgccgagg cgaacgacgg cgtatcgact tccacttcgc gctggttgac gaagcctttt
     1381 ttgtcgcgat gcaggaactc gatgggatct tcaatggtga tgatgtgttc cgggcggctg
     1441 gagttgatgc ggtccagcat ggcggccagc gtggtcgact taccggagcc ggtgacgccg
     1501 gtgacaaggc agaggccgcg ggcttcttcg caaacgtgtt cgatgacctt cggcaaataa
     1561 agttcttcca gcgcgcgaat cttggtggga atcacgcgca gtaccagtcc aacgttgcct
     1621 cgctgctgga agacgttcac gcggaatcgt cccagtccgg cgacaccgta cgccatatcg
     1681 agttcggcgg attccttgaa cttctgcttc tgccggttgg acatcatgct aaaggccatg
     1741 ttcaacatgt cctcggccga aatacgtggc tggtcggtca ggggcacaag ttcaccgtcc
     1801 acacggacat ggggatagtt gccgaccttc aggtgcaagt ctgacgcctt gcgctccatg
     1861 gcaatgcgca gaagatcatc aatatgcata gcgctctctc aagcttaaaa taccgcaaac
     1921 gggcttgctg gctgggctga accgtatcac gcacttaact gccgtgcaat caggcgagtg
     1981 cccggagtgt tactttcttg ctattgccct ggagccccgc aaaaacggtt ctgaatcctc
     2041 gtaacccatt gtgcatcaat agagtagggc caagtacgga ggactacaat gttaccgatg
     2101 acacagaacg ataagttcgc tcgtgtcgtg gtggtggggg ccggtttcgc cggtttgaac
     2161 gccgccaaag cattggccaa tgcggcggtt caggtcaccg ttctggatcg aaaaaatcac
     2221 catacctttc agccgttgct ctatcaagtg gcgctggcgg cgctttcccc ggcggagatc
     2281 gcttcgccca tccgcaatgt gttacgcggg gcgaagaaca cggaagtgct gctgggcgaa
     2341 gtgagcgcat tcgatctgga gcggcgggtc gtgactacgc acgcggccgg cgacagcgac
     2401 gccctggaga ttccttacga ttacctgatc ttggcagccg gagccacgca tgcgtatttc
     2461 ggccatgctg agtgggagca gtacgcgccg ggattgaaga cgattgaaga cgcgacggag
     2521 atccgcggcc gggtgctgct ggcgtttgaa cacgcggagc gcgaggcctt tgcgcacaac
     2581 gttacgccgc aactcaactt cgtggtagtc ggcgctggac ccacgggcgt ggaactggcc
     2641 ggagcgatat ctgatatttc gcgggagtac ctgcagaagg acttccgcac catcgatccc
     2701 agcaagtcgc gaatcattct gattgaaggt ggcccgcgtg ttctggccgc atatccgccg
     2761 gacctttcgg ccagcgcaca gaaacagctt gaagagatgg gagttgaagt ccgtacgggg
     2821 gcgatggtca ccaacattga gctggggatg gtcacggtcg gaaaagaaaa gattgcggcc
     2881 gcggtgattc tgtggggcgc cggagtctcg gcgtcgccac tggggcggat gctgggtgtg
     2941 ccggtggatc gcgccgggcg tgtgctggtc gaacaagatc tcacgatccc cgggcatccg
     3001 gaagtattta tcatcggcga tctggctgcg gcggaggagc ccggcgagac ggctcagtct
     3061 cgaccgggcg caaccgtgag cgacgaagat aagcacacaa aatatgttcc gggcgtggcc
     3121 ccggcggcca ttcagatggg caagttcgcg gcgcggcaga ttcgccggtc agtgaacggc
     3181 gaggcacggg aagtgttcag gtatcgcgat aaggggagcc tcgccacaat cggccgctct
     3241 cacgcggtgg gtgaccttgg caggtttcat atctccggct attttgcatg gctggcgtgg
     3301 ctgtttatcc acctattctt cctgatcgga ttccgaaacc gcatcatggt catgatggaa
     3361 tgggcgtggg cgtacatcag cttcaaccgc agcgcgcggt tgatcaccga accaaaagag
     3421 agcgttatgg aagaggagcg gcccgtcgcc agggttggct agctggcgga tgatctgatc
     3481 agcgcgccgg atagcggtgc gcgttcagat atcggggagg ggattcataa gcgggtgaac
     3541 gcgagggttc acccgctttc ttttgagcag aactacagag agcgcaggaa gtttacgaga
     3601 tcctgctgtt gttgctgcgt gagagcgttg aatttgttaa tgacctggtt ggcctcagag
     3661 cagacctgtc ccgtggcaca ggttgaggca tgaagttcaa tggcgctcac aatgttgttg
     3721 gtcatgccgt tgtggagaaa gaagagtctc tggccaacgc cccagagcgg cgcggtgcga
     3781 aactcatcac tgccggcctg tccctggttg acgccgtccg ccagccccgc tcccatgtga
     3841 tgcaacgcaa aatcagagaa gggatgaaac tccacctggc tcagcggagt aaggtttgac
     3901 ttggcggtgt gaagagagtc tgtatggcaa agcacacatc caatgccggt attcgcggtg
     3961 cctccggaaa ccgacggcac caccgtgcca aagagcgcct ggccgcgctt ggctgagtcg
     4021 ccaagaggct gacagctgtt ctggctggtg aaaaaatcac acggcaccgc cgctgcgttc
     4081 agccgcatga agatggtgaa gttttcaatc agggaagaga tctggctggc gtcattgccg
     4141 gcattgccac cggtaggaat gatcacgtgc gtgttgtctt ccggagtggg attggtggcg
     4201 cagccgccat tggtgcgctc gttggtgaac agttcgttcg taacacccat ctccacgttg
     4261 gctgcttcgc cggagaacat cagcatggat ttgttctgag ccttccagcc gaacttggtt
     4321 atggtgccgt cattgccgct ggtgttgaaa cgccctttga ttcccagcgt agccttggcg
     4381 gcggcaagca aggcgagatt ctgattgagg atgtcttcgg aggcgttctc cacaaatcct
     4441 tcaccaaagg tgggaatggg aatgcgcagc gtcacgttgc cattcttcaa ctgagtggcg
     4501 aagtccggct gctggagcgc gcacccgttg ggcgcatcga cgcggccggt gatggtaaag
     4561 aggtcatgaa cgccgccatc aagagagccg tcaggattct tgataaaacg ggcctccact
     4621 acggggccat tctgtgtaac aaagctgggg atgatgttgc tggcattatc aagattggcg
     4681 accccgattt gcggattcgg tgtggggctg ctaccgccga tcaccggctg agagtggcac
     4741 agcaaacagc tattgccgtt gaaagccggc cccaagcctg cgagcggctc tccgttgagc
     4801 gtacctttca cggaaacgct ctcgccgaag aggttcaaag cgtcaaacca gaaagtgacc
     4861 tgatccggag gaagcccggg aatgggattg ccagctccgc tgggtggctg agggccggga
     4921 cgcggcccgg ggtcgattgc caggggattg ttctgggcgt gcgcaggtag cgtgctcatg
     4981 cccagcagca aagacactgc aaccagggag cacacaaaca ttctcgataa cacacttttc
     5041 ctggtggtat accgcatttg agctttcata tttttctttc tttcctttcc agaactttct
     5101 tgttgaggca ttgcagagag cttgcaaaga agctcgccgc aaccaggagg cttacaggca
     5161 agcagggacg cccagagctt ccgcgggcaa ggattgtgag ctggatttac gccgtgacgt
     5221 gttaaaacgc aaaactttcc ggattgtcga aatgaaactg tttggttcca aaatgggagt
     5281 cacgttggtt ccattttgga acaccattcc gcgcataatc agcatgctgc gttgaacagc
     5341 gcggaggtgt tctataggct ttttaaggtt cagttgtctt ccgccggtcg caatggttcc
     5401 gaatcttggt ccgggagaga ttcagccgcc gcgtcccgga aaagggaaga ccaaaggaag
     5461 gagagaactg atgtcagaca agcgcgagga aaatcgcgtc ctgagccgca cgggcgctcg
     5521 acagatcaaa caggacgaac tcaacaaggt cactggaggc cgcaacacgc gtttgagcca
     5581 gattattacg ggatcttcca gtgatcctga taccggcttt gatacctaag ttgaagctat
     5641 ccggcttgcc agagctgcga taacgaaact cgagttctag gtgcaaatgg gtttcatgcc
     5701 agcacgttcg gagaaggcac aaatctgcaa aaggagatgt tcatggaaag caacaatgaa
     5761 aaccgggtac tcatgcgcat gggcgctcgc aacctctcag agaacgagac cgaccaggta
     5821 acaggcggtc taatccccac tctgctcagc gtgattttca ccaacggtgg cactgatcac
     5881 agccttgatt cctagttgag gcaggtaaac aaagaaccag ggtggccaag agtgccaccc
     5941 tttccattgc acaagcttcc tccggagaac gcccgaatga agatcctgct gctggcgcac
     6001 gaaaaagacg atcacgcggc tcccgtacgc tgggcgctga cgcaggcccg ctacgaggcc
     6061 gaatgccgcg gcggagtgtc ggcggctgtg ggggagcatg cgtcgttatt cctcacccct
     6121 ggagtcttca accccggaat gttcaacagc tcgggaatct ctaacccgga agttttcagt
     6181 gcggcaaact gcaaactgga acctgccgtg gttctgggca agatggtggt gaagcgtggc
     6241 gatactgtct ggtttcgcca gcccgcgctc gacttggagc aaagccagtc atcaaagttt
     6301 tcgagctttt ggaatgagat cgtcgccatc ttcgaactgc tgccggcgcg ctgtgtcaac
     6361 aaaccttcag cttcgaagct ggttacgaac aaggcagtgc agttacggct ggccggcgag
     6421 gctggattgc gcgtgccgga gacggtgatg tcgaacgcgc caacggcggt gcgggaattg
     6481 ttcgaccgct attccgaagg cgcagtttgc aagccgtttg tgccgcacat ctggcagcgg
     6541 cagggcttga aaggcgccgc agtagcggaa acattcacac tgacgcgcgc gcaacttcct
     6601 gcgaatgagg tcttcaccta cgcgccagcc atttaccagc ggcgaatcca aaagcagctt
     6661 gacgtgcgcg cggtgctgct gggcaatcgc gtctactcat tcgccctgcg cacgcccggc
     6721 aatgcgttgg actggcgttt tgacgctgcc agacgcaacc tggatgtgga gatggtcgct
     6781 acgccggctg acgtggagaa agcgttgctg agttttgcgg aagactccgg cgtttgcttt
     6841 ggttcggtgg attttgcagt ggaccaacgt ggcgactggt ggttcctgga gatcaatgag
     6901 cagggccagt ttctctggct ggaagagttc tgcccgcgag ctgcgttgct gcagaagttc
     6961 tgcgctttcc ttactgctga cgagcatacc gccgaatcgc tggaagcgcg tgagcaactc
     7021 tttccatcgc ttgctgatta cgacagagcg caccctcaac gtgaacacct ggactttact
     7081 cacgcgagcg ctgactcatc gttcaagtcg gttgaaccat aactcgttcg ccagcgacgg
     7141 cgctgaacgc tgctgaagat ggcaggaaag ctatgcgtgg ccatgaactc gggcgcgcta
     7201 agctgatgcg aacgtatcaa aagcacagcg cgagtgcggt atagctttca gctctcatcg
     7261 ctcataaatc gcagtgcccg cgccgctcag gtctttgcat aaacagaaaa gccgcgctaa
     7321 ccaacgcggc tttccgaaga gaactcgcct tttgcgctaa acgcctacgg gctgtttaga
     7381 gtgattcttt accggaacgg gcgtgaacca gccgtggcgg tccttgctct tgccgttcac
     7441 gatgccgaag aactcgcgct gcagagccag cgtcacaggg ccggtgatgc cggtgccgac
     7501 cttgatcttg tcgatggtgc tgatcggtgt gatttcggaa gcggtgccgc agaagaagac
     7561 ttcatcagat atatagagca tctcgcgcgg aatcatctgc tcaatcactt ccacgccaat
     7621 atcctgcgcc agggtgagaa ttgcgtcgcg ggtaatgccc ggaagcaccg agttacccag
     7681 cggcggcgtc atgagcttac cgcgtcggac gataaagata ttcgcgccgg aggcctcgct
     7741 cacatagcca ttcacgtcca gggcaatgcc ttccacgtag ccgtttacga tcgcttccat
     7801 cttaataagc tgcgagttca tgtagttggc gccggccttc gacatggcgg gcatggtgtt
     7861 cggcgcgatt cgggaccacg aagacacgca ggcctcaacc ccctcactca cgtcgccttt
     7921 gcccaggtac ttgccccacg gatagttggt catgtagacc tcagtgggtg agttgaaggg
     7981 attcacgccg gcttcgccgt atccgcgcat cacgatcggc cgcacatagc agggccacac
     8041 gccgttggtg gccaccaggt cgcaggcagc ttcacagagc tggtcgagcg agaaaggtgt
     8101 ttcaatgcgg taaattttgg cggagtcaag caggcgctgc atgtgctcac gcagccgaaa
     8161 gatggccggc ccttcaggct gggagtagca gcggatgcct tcaaacaccg acgaaccata
     8221 gttgatcacg tgagacatca cgtgcatggt ggcgtcttcc cagcgaatga acttcccgtt
     8281 gtgccagatc ttctcagttg cctggattgc cattgattta ggggctcctt cttgtcagat
     8341 gaacggttac gctctggtgc tgccgcggag gtccgcccca catctcaagc gtgggctacg
     8401 ggaaaccact taccattaga catgatttcc cgcgcgaacg gcacattata tctgacgaaa
     8461 aaatcagcgg ccagcattag attctctgcg tgacgcgcgt cacggaatcc atgctggccg
     8521 ttgagccttc gatccttgtc cctcggcgat tgctcgccgc ctgatctgtt actggcgttt
     8581 tgctgaagcc gagctacttg tcgaaccgct gctttcatta gcgtgcgcag ccgcgggcac
     8641 ttg
//
LOCUS       DASQYP010000357         9664 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_292677, whole genome shotgun sequence.
ACCESSION   DASQYP010000357 DASQYP010000000
VERSION     DASQYP010000357.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 9664)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9664)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9664
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_292677"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(75..926)
                     /gene="ccsA"
                     /locus_tag="VE783_11620"
     CDS             complement(75..926)
                     /gene="ccsA"
                     /locus_tag="VE783_11620"
                     /inference="COORDINATES: protein motif:HMM:NF013725.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_process: GO:0017004 - cytochrome complex assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c biogenesis protein CcsA"
                     /protein_id="HYX54091.1"
                     /translation="MKSKFFYLLLVVDVGLLAWGTYAGLKLAPTEQTMGDVQRIFYCH
                     VPSAVTGFTLFFLNFIASVMYLWKKSPAADAWALSTAEVGVVFCTVVLVTGPIWARYA
                     WGTWWVWDMRLTTTLILWLLYVSYLVLRKSSEAGSTSVLAAALAIFAFLDVPIVYMAN
                     RWFRTNHPQPMIGTPNLDPRMQNILFFNMFAFLIFGLLIAWFRYDLERMAQKLATLHI
                     QRAARGVMAGLVPAMFLQMPTHSGWAPNTYLVTAYVACWSIYVIYLLMLMSKLKGLQR
                     EQLELGR"
     gene            complement(1677..2522)
                     /gene="ccsA"
                     /locus_tag="VE783_11625"
     CDS             complement(1677..2522)
                     /gene="ccsA"
                     /locus_tag="VE783_11625"
                     /inference="COORDINATES: protein motif:HMM:NF013725.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_process: GO:0017004 - cytochrome complex assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c biogenesis protein CcsA"
                     /protein_id="HYX54092.1"
                     /translation="MNSKLFYAWCGLTVLPLAFAAYLSAVVAPPEATMGAAQRIFYYH
                     APAAAASFSLFIVNCIASICFLVKRTSASDALAVSAAEVGVVFCLVVLVTGPIWARYA
                     WGTWWVWDARLSTTLLLWLLYMSYLILRRAAEPGSSNVLAACLAIFASLDIPLVYMSN
                     RWFRTNHPQPVIGNGLDPDMARVLNWNFLAFLAFAVLICWFRYSIERLAQRVNTAHLR
                     QAARGATAMLALPGSFAFATFKATPSTYFHAGAVAAWSIYGLYVLSLLFKLRNLRREE
                     AELAI"
     gene            complement(2519..3253)
                     /locus_tag="VE783_11630"
     CDS             complement(2519..3253)
                     /locus_tag="VE783_11630"
                     /inference="COORDINATES: protein motif:HMM:NF015344.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015232 - heme transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015886 - heme transport [Evidence IEA];
                     GO_process: GO:0017004 - cytochrome complex assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="heme exporter protein CcmB"
                     /protein_id="HYX54093.1"
                     /translation="MSATMAPETGAAQARSEAPNLGIMRLLLVNVRKDLRLEWRSRDV
                     FNSMLFFALLVVVVFSFAFDPNVEESRRMAGGLIWIAFLFSATMALNQSWARELRNGV
                     LDAYRVSPAPAEALFMGKALGNFIFVLLLECLMAPLFLIFYNLTPVAPFWQLVVISLL
                     GTWALVVNGTFFAVMSIRTRSRELMLPLLLLPISIPAVLMMVTATTAVLTGEGDPWPQ
                     VKFLAAYCIIFTTTCFLLFDTVLNAE"
     gene            complement(3250..3999)
                     /gene="ccmA"
                     /locus_tag="VE783_11635"
     CDS             complement(3250..3999)
                     /gene="ccmA"
                     /locus_tag="VE783_11635"
                     /EC_number="7.6.2.5"
                     /inference="COORDINATES: protein motif:HMM:TIGR01189.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0015439 - ABC-type heme transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015886 - heme transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="heme ABC exporter ATP-binding protein CcmA"
                     /protein_id="HYX54094.1"
                     /translation="MRLQVREHGEGPAARRSRSAALQRLLRRPLTPQASPVEVKNVSK
                     VYGRTAAVRNLSLQLEPGKFYVLRGENGAGKSTLLRMIAGLNEPTEGHIFIYGLKNKE
                     ASQHMGYMAHAPLLYEELSGMENLRFFAHLYGVTSESALVEAMRRVGLDPDLQRRVGQ
                     YSQGMRQRLSLARAIFHAPDLLLLDEPFSNVDPDSAAAIAKLLASMRDEGKTIVLVTH
                     QLGLLASLADEYILMSHGALVERGDMKQVRA"
     gene            complement(3921..4379)
                     /locus_tag="VE783_11640"
     CDS             complement(3921..4379)
                     /locus_tag="VE783_11640"
                     /inference="COORDINATES: protein motif:HMM:NF015085.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c maturation protein CcmE"
                     /protein_id="HYX54095.1"
                     /translation="MSQSRSKFFKFGAAIVVIVMSLGYLAWTGVKESQSFYVTIKEMQ
                     GMGDNAYTRTLRVEGIVKPGSIQRSGAHADFVIQDGEGGNLLLPVSYKGSQPPPDTFK
                     DHAQALVIGNMGRDGTFHAKEVQAKCASKYENMEKAQPQGGAAPQPSKGY"
     gene            4801..6246
                     /gene="thiC"
                     /locus_tag="VE783_11645"
     CDS             4801..6246
                     /gene="thiC"
                     /locus_tag="VE783_11645"
                     /EC_number="4.1.99.17"
                     /inference="COORDINATES: protein motif:HMM:NF006763.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0009228 - thiamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphomethylpyrimidine synthase ThiC"
                     /protein_id="HYX54096.1"
                     /translation="MSENGHKSSQPKPREEWIARRREEAARTGNDNFSQMHYARKGLI
                     TEEMVYVAEKEKITPQQVRDEVAAGRMIIPANINHPELEPMAIGVESLCKINANIGNS
                     AITSDVDEELKKLHTAVHFGADTVMDLSTGGGIREIREAILRHSPVPIGTVPIYEAVS
                     RIKRIEDLSADLMLEVIEEQAQQGVDYMTIHAGVLVQYLPLVSKRITGIVSRGGAIMA
                     QWMAHHHKQNFLYERFDDITKIMKKYDVSYSLGDGLRPGCIADASDEAQFAELRTLGE
                     LTKKAWAHDVQVMIEGPGHVPLDKIKEQVDKEVEWCYGAPFYTLGPLVTDIAPGYDHI
                     TSAIGAAMIGWHGASMLCYVTPKEHLGLPNEKDVKDGIIAYKIAAHAADVARHRPGAQ
                     DRDNALSYARYTFDWEKQFALSLDPETARSMHDETLSDDYYKEAKFCSMCGPKFCSMN
                     YSQKVDEFNKQVYGVEKTDYSQLVEKIAAAK"
     gene            6358..7230
                     /locus_tag="VE783_11650"
     CDS             6358..7230
                     /locus_tag="VE783_11650"
                     /inference="COORDINATES: protein motif:HMM:NF012791.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0032559 - adenyl ribonucleotide binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HYX54097.1"
                     /translation="MAAPVFSAPAAAGLKNVLFTTDFSDESLKALPFAGCITRAFRSR
                     LHLLHIEAAAPLTAGLSDTRLYETAGRNAAGQLSSLRNSPAIQGLDPALVLAEGDIKA
                     QLLKTIGDRRIDLVIAGTRGRTGVRKMLLGSALEEMCRASTCPILTVGPEAVFHPEAP
                     FQRILFPTNLSEESRKAVPYIAMLAAEFGSRVTVLKVLSENEATKSDLSSVINSTRAK
                     MTEMFGPELGKFGIEYQVSFGATAEAVLHLARLKGAGLIAMAIRNAFRPGILRQRTAY
                     QIMAGAPCPVLTVP"
     gene            complement(7430..8923)
                     /locus_tag="VE783_11655"
     CDS             complement(7430..8923)
                     /locus_tag="VE783_11655"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX54098.1"
                     /translation="MPVARILTRFPERTSALVGNLQHHGYTVEIMRPGEAVLRPADLE
                     IDFEICNNEDALQRASELAQQWGTDVAVSPGLGELAPEPLADVVERPMAEAMRDEDEI
                     VVIPPLTETAPATATMQQEEELAPQQPQAALEQPLNFEQPLNMEESVPERGAANFEQE
                     NAHEALQPGDMNARREAEPVEISRDPRDLRLPPEEIAEPAEPRPDYAQKAGEFAAATL
                     NSAKALGARSGEWLHQNSELLRQRLDLKLAEMRARREIRQEQQAKRKALAQERAAELE
                     AARQAAALRLQELLRERGGLTDTQPTPPRVEPGDAQPERRTAVAGAASFFRKHLGFSF
                     HSGISPQLEAVLMGVAAACALFVLGLAVASFHATPAISSTVNAQQPYKGATVQAGGVT
                     LKPAAAATAASAAATNAAPASNAPSATTHASAERPSPVVRSSTAKPPSQQQGNVRRIG
                     SDVLIRRLDQPKTHTGGGDVTIRQLGAGKPATAQSTPGPRRISDLDQ"
     gene            complement(9131..9334)
                     /locus_tag="VE783_11660"
     CDS             complement(9131..9334)
                     /locus_tag="VE783_11660"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX54099.1"
                     /translation="MNTVVNKFVEAHDRYLELDRMRTECINPAERESMHIAILRAYLE
                     VQFHARQIAGLQYADGMDFADVN"
BASE COUNT         2106 a         2776 c         2921 g         1861 t
ORIGIN      
        1 ttacgagcag tttaaatgaa gtctcctgct cggcaagtca acatttcgac aatcgaatac
       61 ggcgttcact taacctagcg gccgagttcc agttgttcgc gctgcaagcc cttcagcttg
      121 ctcatcagca tcagcaggta gatcacgtaa atcgaccagc aggccacata ggcggtgacc
      181 agatacgtat tcggggccca gccgctgtgc gttggcattt ggaggaacat ggcgggaaca
      241 aggccggcca tgacgccgcg ggcggcgcgc tggatatgga gagtcgccag cttctgggcc
      301 atgcgctcaa gatcgtaacg gaaccaggca atgagcagtc cgaagatcag gaaggcgaac
      361 atgttgaaga acaaaatgtt ctgcatgcgc ggatcgaggt tgggagtgcc gatcatgggc
      421 tgcgggtggt tggtgcggaa ccagcggttg gccatgtaga cgattggcac atcgaggaag
      481 gcaaagatgg ccagcgcggc ggcgagcacg gaagttgacc ccgcttccga cgacttgcgg
      541 agcaccaggt agctcacata aagcagccag aggatgagcg tggtggtgag gcgcatgtcc
      601 cagacccacc aggtgcccca ggcgtaacgc gcccagatgg ggccggtgac cagcaccacg
      661 gtgcagaaga ccacgccgac ttcagcggtg gagagcgccc aggcgtccgc cgcggggctc
      721 ttcttccaga ggtacatgac ggaggcgatg aagttcagga agaacaaggt gaagccggtg
      781 acggccgagg gaacgtggca gtaaaagatg cgctgcacgt cacccatggt ctgctcagtg
      841 ggcgcgagtt tcaggccggc gtaagtgccc caggcgagca ggcccacgtc tacgaccagc
      901 aaaagataaa agaatttcga tttcatggct ttaataaata cggtaccaaa atagcgccga
      961 ttggaaatgt ggcaaatatc acaaaaggga cagacgaggg ccttagcacc agaggggaag
     1021 accgagggcg aattggtaat tgagtaatct ggtaattggg taattggaag acctgtaccc
     1081 acccctccgc cttcggtcgc tacgctcccg tgcggctccg gaggtggcct cacttcttga
     1141 cgggccaagc gccctgttcg tgaaaggctc gagaagtagt cagccatgaa tgcatggtga
     1201 caaagcatgc cagttacgaa acggttgccc gatttggtaa gtgggtaatt tggtgagttg
     1261 gtaattggaa acgcggcacg ccgcgacatt aatttctgtg tcgcccctat acggggctcg
     1321 gtttctcttt gaacaacgcg agcagcattc attccatgtg tgcatggtga cagaactcgc
     1381 cagtggctgc ggggcgcgtg attgtcacaa tcccaccgat gccaggaaca actacgactt
     1441 gaagccactt tggtacggaa cggtgatcga gtaaaagtat atgaaccctt ctttgcacta
     1501 cggcggcaag cgctgcgaac tggagtgggt gtggtgatga atacagggaa tgtaaccggc
     1561 acaggcgggg cgcctgtgct agagacgtgt aaccgattga gtcatttaaa gacagctttt
     1621 cgtcgacgcc gacatggccc ttgagaaccg ctccgtgcgc catctcacat tgcgagtcag
     1681 attgccagtt cggcttcttc gcgcctgagg ttcctcaact tgaagaggag tgagagaaca
     1741 taaaggccat agatggacca tgccgcgacc gcgccagcat ggaaatacgt gctcggcgtg
     1801 gctttgaacg tggcaaaggc aaagctgcca ggcagggcca gcatggcagt cgctccgcgg
     1861 gcagcctgcc gcaggtgagc ggtgttcacg cgctgcgcaa gccgctcaat ggagtagcga
     1921 aaccagcaga tcagaacggc aaaagcaagg aaggcaagga aattccagtt caggacacga
     1981 gccatgtcgg gatccaggcc gttgccgatt accggctgag gatggttggt gcggaaccag
     2041 cggttggaca tgtaaaccaa gggaatatcg agggaggcga agatggcgag gcaggcggcc
     2101 agaacgttgc tggagcctgg ctccgcggcg cgacgcaaaa tcagatagct catgtagagc
     2161 agccagagca gtagagtggt gctgaggcgc gcgtcccaca cccaccatgt gccccaggca
     2221 taacgagccc agatgggccc ggtgacaagc acgacgaggc agaagaccac gcctacttcc
     2281 gcggcgctta cggcaagagc gtcagatgcg gaagtgcgct tcacaaggaa acagattgag
     2341 gcaatgcagt tgacgatgaa caggctgaac gaggctgcag cggccggcgc gtgatagtaa
     2401 aaaatgcgct gcgctgcccc catggttgcc tcaggcggcg ccaccaccgc cgacaggtac
     2461 gcagcaaatg cgagcggcag tacggtaagg ccgcaccagg cgtaaaagag tttagagttc
     2521 attccgcgtt cagcaccgta tcaaacagca aaaagcaggt ggtggtaaag atgatgcaat
     2581 aggccgccag aaactttact tgcggccagg ggtcgccttc gccagtaagc acggcggtgg
     2641 tggcggtgac catcatgagc acggcgggaa ttgaaatggg gaggagcagc aggggaagca
     2701 tgagttcccg gctgcgcgtg cggatggaca tgacggcgaa aaacgttccg ttcaccacca
     2761 gcgcccaggt gcccagcaat gagatcacca cgagttgcca gaacggcgca accggagtga
     2821 ggttgtaaaa gatcaggaac agcggggcca tcaggcattc cagcagcagg acgaagatga
     2881 aattgcccag cgccttgccc atgaagagcg cttcggccgg cgccggcgac acgcgatagg
     2941 cgtcgagcac gccgttgcgg agttcgcgcg cccatgactg gttgagcgcc atggtggcgg
     3001 agaagagaaa ggcgatccag ataaggccgc cggccatgcg ccgcgattct tccacgttgg
     3061 gatcaaaggc gaagctgaaa accaccacga ccagaagcgc aaaaaacagc atggagttga
     3121 agacgtctcg cgagcgccac tccaggcgca ggtctttgcg gacgttgacc agcaggagcc
     3181 gcatgatgcc gaggttcggg gcttcactgc gcgcctgagc ggcgccggtt tcgggagcca
     3241 tggtggcgct cacgcgcgca cctgcttcat gtctccgcgc tccaccagcg cgccgtgcga
     3301 catgagtatg tattcgtcag ccaggctggc gagcaggcca agctgatgcg tgaccagcac
     3361 aatggtcttg ccttcgtcgc gcatgctggc cagcagcttg gcgatggccg cggcggaatc
     3421 agggtcaacg ttggagaaag gctcatcgag cagcaggaga tcaggagcgt gaaagatggc
     3481 gcgagccagg gaaagccgct ggcgcatgcc ctgcgagtac tggccaaccc ggcgctggag
     3541 atcggggtcg agtccgacac ggcgcatggc ttcaaccagc gcggattctg aagtcacgcc
     3601 atagagatgg gcgaagaagc gcaggttttc catgccggaa agctcttcat agagcagcgg
     3661 cgcgtgcgcc atgtaaccca tatgctgcga ggcttctttg ttcttgaggc cgtaaataaa
     3721 gatgtggcct tccgtaggct cattgaggcc ggcgatcatg cgcagcaggg tggattttcc
     3781 ggcgccgttt tcgccgcgca gcacgtagaa tttgccaggc tccaattgca gtgagaggtt
     3841 gcgtacggcc gcggtgcgac cgtaaacctt ggaaacgttt tttacctcaa cgggagaagc
     3901 ttgcggggtc agcggacgcc tcagtagcct ttggagggct gcggagcggc tccgccttgc
     3961 ggctgggcct tctccatgtt ctcgtacttg gaggcgcact tggcctgtac ttccttggca
     4021 tggaaggtgc cgtcgcggcc catgttgccg atgaccagcg cctgcgcatg gtctttgaag
     4081 gtgtccggcg gaggctggct gcctttgtag ctgacgggca ggagcaagtt gccgccttcg
     4141 ccatcctgga tcacgaaatc agcatgcgcg ccgctgcgct ggatggagcc gggctttacg
     4201 atgccctcaa cgcgcaatgt gcgcgtatag gcgttgtcac ccatgccctg catttctttg
     4261 atggtgacgt aaaaactctg gctctctttt actccggtcc aggccagata gccgagtgac
     4321 atgacgatga cgacaatggc cgcaccaaac ttgaaaaact tgctccgcga ttgcgacata
     4381 taagaagggt agcctcgttt gacattgtat tcaagagcga acactggatg tgtgacatag
     4441 gtcacgagga taggaagcga gcagaaacac agtattttca gccatttgca aggatgctgc
     4501 gggttggaaa tgaaggtgca actttgcact gaagtcacta ggcaacggaa tccagaattg
     4561 ggcggcgtca tggcggccca atcacgagcg gcgcagccga ccggacatgg agaggcggtc
     4621 ggcttgaacg cgagattcga ggggcgggta gtcgccccgc caaggttaat ggggctgtga
     4681 aggcagggag gcacgccagg taatgcgagt gtcccagcca gtgaggtgcg ccagggcgct
     4741 catcttcgag aaatccggcg cgtataatga taagtttagg cagatcccta aggtgaaatc
     4801 atgagtgaga acggccacaa gagctcccaa cccaagccca gagaagagtg gattgcgcgc
     4861 agacgtgaag aagcagcgcg taccggcaat gacaactttt cgcaaatgca ttacgcccgc
     4921 aagggcctga tcaccgaaga gatggtctat gtggcggaga aggaaaagat cacgccgcag
     4981 caggtccgcg atgaggtggc cgcgggaagg atgattatcc cggccaacat taaccatccg
     5041 gagctggagc ccatggcgat aggcgtggag tcgctgtgca agatcaacgc gaatatcggg
     5101 aattcggcga ttacttcgga tgtggacgaa gagctgaaga agctgcacac ggcagtgcac
     5161 tttggggccg acaccgtgat ggatttgtcg acaggtggag ggattcgcga gatcagagaa
     5221 gccatcctgc ggcactcgcc ggtgccgatt ggtacggtac cgatttacga agcggtttcg
     5281 cggataaaac ggattgaaga cttgagcgcc gacctgatgc ttgaagttat tgaagagcag
     5341 gcccagcaag gcgtcgatta catgacgatc catgccgggg tcctggtcca gtatctgccg
     5401 ctggtatcaa agcgcattac tggaatcgtg agccgcggcg gcgccatcat ggcccagtgg
     5461 atggcccatc accacaagca gaacttcctt tacgagcgct ttgatgacat cacgaaaatc
     5521 atgaagaagt atgacgtctc ctactccctg ggagacggcc tgcgcccggg ctgcatcgcc
     5581 gacgccagcg acgaagccca gttcgccgaa ctccgcaccc ttggtgaact cacgaaaaaa
     5641 gcttgggcgc atgacgtaca ggtgatgatt gaaggccccg gccacgtgcc gctcgacaaa
     5701 atcaaagagc aggtcgacaa ggaagtggag tggtgctacg gcgcgccctt ctacaccctc
     5761 ggccccctcg tgaccgacat cgctcccggc tacgatcaca tcacctccgc catcggcgcg
     5821 gcgatgatcg gctggcatgg cgcctccatg ctctgttacg tcaccccgaa agagcacctc
     5881 ggcctgccaa acgaaaagga cgtcaaggac ggcatcatcg cctacaagat cgcggcccac
     5941 gccgcagatg tcgcccgcca ccgccccggc gcgcaggacc gcgacaatgc ccttagctac
     6001 gcccgctaca ccttcgactg ggaaaagcag ttcgccctct cgctcgatcc cgagaccgcc
     6061 cgctccatgc acgacgaaac gctttccgac gactactaca aagaggcgaa gttctgctcc
     6121 atgtgcggcc ccaagttctg ctccatgaac tactcgcaaa aggtcgacga gttcaataag
     6181 caggtttacg gcgtagaaaa aaccgactac tcgcagttgg tcgaaaaaat cgcggccgca
     6241 aaataacttt ccggcgcaaa cccatctcac acctgcagcg tgattccgct gccggttact
     6301 tttgcgcaga cgccttttgc ccctccggcg tatctaaatg tgttacgggg gtgaattatg
     6361 gcagcacccg tcttttccgc accggcagcc gccggcctga aaaacgtcct cttcaccaca
     6421 gatttttctg atgaatcgct caaagccctg ccgttcgccg gctgcatcac gcgggcgttc
     6481 cgctccaggc tgcatctcct gcacattgag gctgccgcac cgctgaccgc cgggctctct
     6541 gatacacgcc tctatgagac agccggacgc aacgccgccg gtcaactatc atccctgcgc
     6601 aactcgcccg cgattcaggg tctggatccc gcgctggtcc tcgctgaagg cgatatcaaa
     6661 gcccagctgc tgaaaaccat cggcgaccgt cgcattgatc tcgttattgc cggaacgcgc
     6721 ggccgcaccg gcgtacgcaa aatgctgctc ggatcggcgc tggaagaaat gtgccgcgcc
     6781 agtacctgcc ccattctcac cgtcggccct gaagccgtgt tccacccgga agcgcccttc
     6841 caacgcatcc tgtttccaac caatctgtca gaagaaagca gaaaggccgt gccttacatc
     6901 gccatgctgg ctgcggagtt tggatcgcgg gtgaccgttt tgaaggtgct gtccgaaaac
     6961 gaagccacca agagcgacct tagctccgtg atcaactcaa cccgagcgaa gatgacggag
     7021 atgttcggcc ccgaactcgg caagtttggc attgagtatc aggtttcctt tggcgctaca
     7081 gcagaggccg ttctgcatct cgccaggcta aagggtgcag gcctcatcgc catggccatc
     7141 cgcaatgctt tccggccagg tatcctgcgg cagcgcaccg cttaccagat catggctggc
     7201 gcgccctgcc cggtgctcac ggtgccgtaa ggagagagcg gctaccgggc cgcagcagac
     7261 agaacttctc accgccggct ctcgtcaggc gcgccgaaag aggaagtctg gaagtagcct
     7321 gctttgcatt gtccagaact gcaaagacac actcttccac tctgtttcgt gttcctctgt
     7381 gttgcgaagc tactcgtttg aaaagctgcg ctcgtgcaac atccgttgct tactgatcaa
     7441 gatcagaaat ccgccttggc cccggcgtgc tctgggccgt agccggtttc cccgccccca
     7501 gttgccggat cgttacgtcg cctccgccgg tgtgcgtctt aggctgatca agcctgcgga
     7561 tcaacacgtc gctgccgatc cttcgtacgt ttccctgctg ctgcgaaggg ggcttcgcgg
     7621 tcgacgatct caccaccgga ctcggccgtt ccgcggaagc gtgcgtcgtc gcgcttggcg
     7681 cgttcgaggc aggggctgca ttcgtcgccg ccgcgctcgc cgcagttgct gcggcggccg
     7741 gcttcagtgt cacgccaccg gcctgtaccg ttgcgccttt ataaggttgc tgggcattca
     7801 cggtacttga aatcgccgga gttgcatgga aagaagccac tgccagcccc agcacgaaca
     7861 aggcgcatgc ggctgccaca cccatcaaca ccgcttcaag ctgcgggctg atgccgctgt
     7921 ggaacgaaaa tcccaggtgc tttctgaaaa agctggctgc tccggccacc gcagtgcggc
     7981 gctcgggttg cgcatctccc ggttccacgc gcggtggcgt cggctgggtg tccgtcaatc
     8041 cgccgcgttc gcgcagaagc tcctggagtc ggagtgctgc ggcttggcgc gctgcctcaa
     8101 gttcagccgc ccgctcctgg gccagcgcct ttcgctttgc ctgctgctcc tgccgaatct
     8161 cccgccgggc ccgcatctct gccagcttca ggtcaaggcg ctggcgtaat aactcagaat
     8221 tctggtgcag ccactcgcct gatcttgcgc ccagagcctt ggcggagttc aacgttgccg
     8281 cggcaaactc acccgccttc tgcgcataat ctggcctcgg ttcggccggc tccgcgatct
     8341 cttccggcgg caatctcaaa tcacgaggat cacgtgaaat ttcaaccggc tctgcttcgc
     8401 gcctcgcgtt catgtccccc ggttgcagcg cctcatgagc gttctcctgc tcaaaattcg
     8461 ccgcccctct ctccggtacg ctctcttcca tattgagggg ctgttcaaaa ttgaggggct
     8521 gttctaacgc ggcctgcggc tgctgcggag caagttcctc ttcctgctgc atcgttgccg
     8581 tagctggcgc agtttccgtc aggggcggaa tcaccacaat ctcgtcttcg tcccgcatgg
     8641 cctcggccat aggccgctcc accacatccg ctaagggctc cggcgcaagc tctcccaggc
     8701 cgggagagac tgccacgtcg gtgccccact gctgcgccag ttcgctggcg cgctgcagcg
     8761 catcttcgtt attgcagatt tcaaaatcga tttccaggtc ggcaggcctg agtacagcct
     8821 cgccgggccg catgatctct actgtgtagc catgatgttg aaggttgcca acaagagcgc
     8881 ttgtgcgctc ggggaaacgg gtcagaatac gagccaccgg cattgaacca gctccgggcc
     8941 agaatattta tgggactttt cccagagccg cctggctcgg ctcgtgggca caaaagtggc
     9001 gtgtgtattt tgacgcaaat tatacgcgca gaggtggcct gggagtagta cgaagttctt
     9061 cttagtctct tgccgattgg tccgtcagcg acatctgtcg cagggagatg gggtgcgccc
     9121 gttcagccgc ttagttaacg tcggcgaaat ccataccgtc ggcgtactgc aggccggcaa
     9181 tctggcgggc atggaactgc acttccaggt acgcgcgcaa aatggcaatg tgcattgatt
     9241 cgcgctccgc cgggttgatg cattcggtgc gcatccggtc cagttccaaa taacgatcgt
     9301 gcgcttccac aaatttgttg accacggtgt tcatggcgtt acattgttcc cggcgtgagc
     9361 atcctcacga atcgctcaaa acacttagga acaatccttt ctgtgcttag tccggtaacg
     9421 ttacttgaat aacgttacca acacctcctt tttacgcgca caccaggcga gtgactgtga
     9481 gtggtatcac actgcttgga actaagtgcc gaagggcgct gtacacgacg tcaggctgcg
     9541 cgacgaggaa agtcaggcgg gacgggattc tccgctcaga aacgtagtct ggaccacaat
     9601 gaatcgatgt gggcgaaacg tcgtctgtac cacaatgatc gatatgggcg gcctcaagcc
     9661 tcca
//
LOCUS       DASQYP010000358         2098 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_124763, whole genome shotgun sequence.
ACCESSION   DASQYP010000358 DASQYP010000000
VERSION     DASQYP010000358.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 2098)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2098)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2098
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_124763"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..907
                     /locus_tag="VE783_11665"
     CDS             <1..907
                     /locus_tag="VE783_11665"
                     /inference="COORDINATES: protein motif:HMM:NF012798.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="site-specific integrase"
                     /protein_id="HYX54100.1"
                     /translation="SGHEEVPMTRLRKIMLEELQRRNYAEGTTRSYVRAVQQFAQYFG
                     KSPDKLGPSELRSYQAYLLKERKLAVGTVVARVAALRFFFVRTLKRHQFREDLPYPKK
                     QRRLPTVLSLEEVAQLINAAGNLMQRALLMTLYGTGMRRTEVSQLKVRDVDSKRMMIR
                     VEHGKGGVSRDLPLSPALLETLREYWRWKKPRTHLFPAQQRGKEGPISDKTVWYACSE
                     AARHAGITKHVTPHTLRHSWATHLLEAGTDLRTIQILLGHGDLETTAKYLHLSQRHLQ
                     AVANPLETLCLSSVQEASRSYHRKK"
     gene            910..2085
                     /locus_tag="VE783_11670"
     CDS             910..2085
                     /locus_tag="VE783_11670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015934105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS91 family transposase"
                     /protein_id="HYX54101.1"
                     /translation="MTRPALEVADILRARGDHFLDRYRSSFDFQQRKAFRAIQRCRTA
                     ALGGHVDVCSQCGRQEISYNSCRNRNCPKCQTQARQHWLAARERELLATDYFHVVFTV
                     PHELNALALHNPRLFYDLLFTASAQTLLEVAADPHHLGAEIGVISILHTWGQNLLLHP
                     HIHCAIPAGGLSPDRKRWIRSRDRFFLPVKILSRAFRGKFLAGLKRLYRNKELHCAGP
                     SATLAEPEPFMQLLRRLYRQDWVVYAKPAFGGPMQVLRYLGRYTHRVAISNHRLLAFD
                     GEHVTFRWKDYAHGGKHGQMKLRAGEFLRRFFLHVLPKAFVRIRHFGFLANRFRAARV
                     SLCRQLLTPLSPTADTKTTPAACENSLWQCPSCGAPMIILQRFTAAELALCVRLDSS"
BASE COUNT          422 a          654 c          572 g          450 t
ORIGIN      
        1 gtcgggtcat gaggaggtcc ccatgacccg acttcgcaaa ataatgctgg aagaactcca
       61 gcgacgtaat tatgcagagg gtaccacacg tagctacgtt cgagcggtgc aacagttcgc
      121 gcagtacttc ggaaagtctc ccgacaagtt agggccaagc gagcttcgca gctatcaggc
      181 ctacctgctc aaagagcgca agctggctgt gggcacggta gtggctcgcg tggccgcgtt
      241 gcggtttttc tttgtgcgca cgttgaagcg gcaccagttc cgggaagacc tgccctatcc
      301 caaaaaacaa cgtcgcctac cgacggtgct gagtttggaa gaggtcgccc agcttatcaa
      361 tgcggcgggt aatctgatgc agcgcgccct gctgatgacg ctctacggca cgggcatgcg
      421 acgcaccgaa gtgtcccagc taaaggttcg ggacgtcgac agcaagcgca tgatgattcg
      481 ggtggaacac gggaagggcg gtgtcagccg ggaccttcca cttagtcccg ctttgctcga
      541 gacactccgg gaatactggc gttggaagaa gccccgaacg cacttgtttc ccgcgcagca
      601 acgcggcaag gaggggccga tctccgataa gaccgtgtgg tatgcctgca gtgaagcggc
      661 ccgccatgcc ggcatcacca agcatgtgac accgcacacc ctgcgtcaca gctgggctac
      721 tcacttgctc gaagcaggca ctgatctgcg caccatccag attttgctcg gccacggcga
      781 tttggagact accgccaagt atctgcactt gtcacagcga cacttgcagg ccgttgcgaa
      841 cccgctggag actctgtgtc tttccagcgt tcaagaagct agccgcagtt atcaccgcaa
      901 aaagtagaga tgacgcggcc ggccctcgag gtggccgata tcctacgcgc tcgcggcgac
      961 cacttcctgg atcgctatcg atccagcttt gattttcagc agcgcaaagc gtttcgtgcc
     1021 attcaacgct gtcgcacggc agcgctgggc ggtcatgtgg atgtgtgttc tcagtgtggc
     1081 cgccaggaga tctcgtataa ctcctgccga aatcgaaact gtcccaagtg tcagacgcaa
     1141 gcacgccaac actggctggc ggcacgagaa cgagaactcc tggccaccga ctacttccac
     1201 gtggtattca ccgtgcccca cgagctgaat gcgctggctt tgcacaaccc ccgtttgttt
     1261 tacgatctgt tgttcactgc cagcgctcag accttactcg aagtagccgc cgatcctcat
     1321 cacttgggag cagagatcgg cgtgatcagc atcttgcaca cctggggaca gaacctgctg
     1381 ctccatcccc atattcactg cgccatcccc gctggtggac tatcgccgga ccgcaagcgt
     1441 tggatccgct ctcgtgatcg gttcttcttg ccggtgaaaa tcctcagtcg cgcctttcgc
     1501 ggaaaatttc tggccggtct caaacgcctg taccgcaaca aggaactcca ctgcgctggc
     1561 ccatccgcca ctctggctga gcccgagcca ttcatgcaac tccttcgtcg cctgtatcgc
     1621 caggactggg tcgtctatgc caagccggcc tttggcggtc cgatgcaggt gttgcgctat
     1681 ctgggccgct acacccatcg cgtggccatt tccaatcatc gcttgctggc atttgatgga
     1741 gagcacgtca ccttccgctg gaaagactat gcccacggcg gcaagcatgg tcagatgaaa
     1801 ctccgcgcag gcgagttctt gcgccgcttc ttcctgcatg tgctgcccaa agcgttcgtg
     1861 cgcatccgcc acttcgggtt tctcgctaac cgattccgcg cggctcgagt atccctgtgc
     1921 cgccaactgc tcactccgct ttcccctacc gctgatacaa aaacgactcc ggctgcctgc
     1981 gagaattcgc tttggcagtg tccctcatgc ggtgcgccga tgatcatcct gcaaagattc
     2041 acggcggcag aattggctct atgcgttcgt ctcgattctt cttaagactt caaccaac
//
LOCUS       DASQYP010000359        14976 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_163469, whole genome shotgun sequence.
ACCESSION   DASQYP010000359 DASQYP010000000
VERSION     DASQYP010000359.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 14976)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14976)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14976
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_163469"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..275)
                     /locus_tag="VE783_11675"
     CDS             complement(<1..275)
                     /locus_tag="VE783_11675"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX54102.1"
                     /translation="MSRISRIVAIAALISTGMFLSGQRAADSANSQQPSLSVTVKVVN
                     VPATVRDKHGQIMRNLTKDDFILEEDGRAQNIKYFSHDTDLPLTLGLL"
     gene            complement(438..1970)
                     /locus_tag="VE783_11680"
     CDS             complement(438..1970)
                     /locus_tag="VE783_11680"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX54103.1"
                     /translation="MSPELLARSLQEFLSEARSGVALEDDQIIFDLAVAQYSVSADRG
                     RCMLHLWSEERNIVRQVIDAEAKNGSLILSVQRFGQNRPHKLELCRDRDRRSQSARTA
                     ARKSYARLLEHTLRRQFPDWKLDRLSTTMDLERSFSPVYARGLLRKGRSAAAVLGVNQ
                     QETQSSIDAALTFGLLWLDHCREREAGQSVVEGVKLFAPPGSSTTLRIRMAQLNHSAA
                     KFQLHELDELDESLAEIDCADTGNINTRLVRCPDHEKTRSRFHSAIARVLAEVPNAEV
                     AVLSPTEISFRLHGMEFAKARLLNAPGSFDMTEEFVFGVGGYQAPLTGENHDMFRQFA
                     ATIRDARTLDGNRHDPLWRMYPERWLESLVFSNVAAIDGRLDPAHVYAQVPAFSASDR
                     AMIDVLARTRDGRLAVLELKADEDIHLPMQGLDYWSRVKWHHHRDEFQAHGYFAGVEL
                     SPKPPLLMMVAPALRVHPSIDTVLRYFSPEIEWTLMGVDERWREGVKVVFRKHSIRKP
                     MS"
     gene            complement(2015..5383)
                     /locus_tag="VE783_11685"
     CDS             complement(2015..5383)
                     /locus_tag="VE783_11685"
                     /inference="COORDINATES: protein motif:HMM:NF013508.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX54104.1"
                     /translation="MSSGILSLVLCLFGCTLTAQEAPKKGNEDQGTPSETLNKVTGGP
                     VAQSIATLPAGPVHIVPFGRGSQKLKNTFAAAGAHLTYWGGPVISQVHVVAVFWGSGV
                     NSAITGANGIDQFFTDITQSQYYDLLTEYSTTGITGSGVPATSSNQAISRGVFDGKFT
                     ITPALCATTATCSLTDVQIQQELLRQLNNGGLPQPVTDTQGNVNTFYMIYFPPGVSIN
                     VGGTNSCVTNGFCAYHSNTATRLIPYGVQPDFAPPSGCSTGCGAGTLFDQVTAVTSHE
                     LSEAITDPQVGSATTTAPPLAWYDPDPAANPLAEIGDICNGQDTQVSVGRNTYMVQQE
                     FSNLQNDCVAAPPIFKLNAPAGVVPSTAFNVTLTVESSNTLQNLTNYTGTVHFTSSDA
                     NAILPADYTFTSADAGVHTFSVTLATLGQQTLTVTDTRSAGFTATATINVSTAPDLTI
                     SKSHTGNFPAGQTGSYNIVVSNIGLGPTTAAVSVSDSLPAGLTAKTISGTGWTCTLSP
                     LVCTRSDVLAVGNSYPPISLVVDVAFNTATFVTNQATVSGGGETNTANDIALDLTTVN
                     QPIAPDLVIFKNHAGNFSQGQTGAVYNLSVSNQGNAATTGTITVTDTLPQGLTATSLS
                     GTGWTCALATLTCTRSDAFAANALIPAITLIVDVATNAPATVVNSASVSGGGELNTTN
                     DTAQDSTTIVPLVPDLTVTMGNSPLSFLQGQTGSFTITVSNAGAAPTSATVTATVALT
                     AGLSPASLSGVGWTCDLPTVTCSRNDALAGFGSYPAISLSVNVAANAPASATATATVA
                     GGGETNTANDAVSNVVSIFTPVIDLTPQITLITGNVIQGQTNATYRVVIANFGNSGSS
                     GLLTVTHSLPAGLSAVDISGQGWTCTLATTTCTRSDSLGGSQGFSPINVTFNVANNAT
                     ISLVSVSATISGGGDTTPNNNTASAPFNIDPMIQMVPNPVQDTVTAGQAATFGFAVTP
                     AASAGTVTFSCSGLPKGTACGFNPASVTQAGNVTLTVTTTSRAGAFSFRFPQGTMPSM
                     PVVVFAVMALTLLIASQRSRGLRPATAFCALLVIVAITGCGGGGGTNNFVPTPTPAPT
                     PNPNGTPAGTYTVVVTATGSSAGTNSQGFILIVK"
     gene            5764..7191
                     /gene="tldD"
                     /locus_tag="VE783_11690"
     CDS             5764..7191
                     /gene="tldD"
                     /locus_tag="VE783_11690"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: protein motif:HMM:NF008006.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008237 - metallopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metalloprotease TldD"
                     /protein_id="HYX54105.1"
                     /translation="MTNQPIFYQKFGITSNDLQRYLAEALSAGGEYADLYFEYLTTTS
                     ITVDESLVKSAAQGISAGCGIRVLSGERTGYAYTDDLAPEKILRAARTAALIASGPSK
                     EPVQGFKETQGHQLYQVSTPSSDADIAAKLELVVRADRAARAYDARIVQVRASYVDES
                     RQILVVGSDGTFATDVQPLARFSLTTIAKSGPNSARGTAGGGGRVALDFFQTEKTPEY
                     YAHEAARQAIIQLDAREAPAGEMEVVLGPGWPGILLHEAIGHGLEADFNRKGTSAFSG
                     LIGKRVASEKCTVVDNGTLPSRRGSINVDDEGSPTQNTVLIEKGILKGYLSDKLSSKL
                     MKMPDTGNGRRESYEHIPMPRMTNTYMLSGDDAPEDIIRSVTRGVYAVNFGGGQVDIT
                     NGKFVFSTSEAYLIENGKITAPLKNCTLIGNGPDALTKVSMVGNDLQLDEGVGTCGKD
                     GQSVPVGVGIPTIKLDSMTVGGTAR"
     gene            7195..8577
                     /locus_tag="VE783_11695"
     CDS             7195..8577
                     /locus_tag="VE783_11695"
                     /inference="COORDINATES: protein motif:HMM:NF039907.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TldD/PmbA family protein"
                     /protein_id="HYX54106.1"
                     /translation="MATNTETLSGAQASLREVATEIIDRAMKAGATAADALVREGTEF
                     STVVRLGQVETLKEAGSRGAGLRVFMGQRVASTYSSDLSSEGIDYLVKGALELARVTS
                     EDPFVSLPEPSQLGSVSGDLRLYYDDVYSLPPEERIDYARRAERAALESDPRLKNSEG
                     GSFDAATTHRVFANSLGFVGEYSKSNCSIAAVPIAQDEKGAMQRDYWYSSARTLAKLE
                     SPEAVGREAARRTLRRIGARKIASTAATIVLDPQMAGSFLGNIFEAASGDSIYRQSSF
                     LVEKLGKKIAGDNVTVIDDGTMPGGFGTSPFDGEGIPTRKTVVVENGVLNSYLLNTYT
                     ARKLGLKTTGNAVRGLAGNPGIGNGNFYLKPGKHSPQQIIAGVQRGLYVTEFLGFGVN
                     MVTGDFSRGASGQWIENGEFAYPVEEITVAGNLKDMLNNIVEIGDDLVFRSSVACPTL
                     RIQGMTIAGE"
     gene            8631..9158
                     /locus_tag="VE783_11700"
     CDS             8631..9158
                     /locus_tag="VE783_11700"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX54107.1"
                     /translation="MADPQPNPPETEQSSYAPAEPESSSKLPMVIGLAVVIVVIIAFI
                     IFGRGGSSENANQQDPYISKLQISNQHMATAENFAGGSVTYILGTVANTGDKKLSGAR
                     VQVLFKNSLGEIAQKETLPLTVLLPNSPYVDYAPLDRAPLGAGQQRDFRLTLEHVTAD
                     WDGQVPQIKVVSVTY"
     gene            complement(9210..11876)
                     /gene="clpB"
                     /locus_tag="VE783_11705"
     CDS             complement(9210..11876)
                     /gene="clpB"
                     /locus_tag="VE783_11705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016636114.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent chaperone ClpB"
                     /protein_id="HYX54108.1"
                     /translation="MAIRWDKFTVKSQEAIQQGSELASQNGNPELMPVHVLAALVQDR
                     EGIVVPILTKLGANPGNVEQQAQQRVDRLPKVSGSAAQPHLSSPMQKVLDQAFKEADK
                     FKDEYVSTEHLLLAMSASETRDRANEAQEILSAAGVTYDGILKALTAVRGSQRVTDQN
                     PEGKFQALERYAKDLTELARRGKLDPVIGRDDEIRRVIQVLSRRTKNNPVLIGEPGVG
                     KTAIVEGLAQRIINGDVPEILKNKRVVSLDLGSMLAGAKYRGEFEDRLKAILKEIEDS
                     NGQIVLFIDELHTLVGAGAAEGAIDASNMLKPALARGELRAIGATTLNEYRKYIEKDA
                     ALERRFQIVFVGEPNVEDTISILRGLKERYEVHHGVRIKDSAIVAAATLSHRYISDRF
                     LPDKAIDLIDEAAASLRIQIDSMPTEIDQLERKATQLEIEKQALKKEDDPNSRERLAA
                     VERELAQIREQSNALKARWKEEKSGITKIRELKERIEQLKIEEQQAERKGNLEKVASI
                     RYGELRQAEAELTKLNAQADGNAQQNRMLKEEVDEEDVAGIVSKWTGIPVSKMLEGEV
                     KKLVNMEDRLRQRVIGQDIALSRVANAIRRSRAGLSDPRKPIGSFIFLGPTGVGKTEL
                     ARALAEFLFDDEHAMVRIDMSEYMEKHAVARLIGAPPGYVGYDEGGQLTEAVRRRPYC
                     VILFDEIEKAHPDVFNVLLQILDDGRLTDSKGRTVDFKNAVIIMTSNIGASYLQAEGL
                     ASAEAFAEATEHVMEALRQHFRPEFLNRVDDIVVFSPLGEEQLMPIIELRLDDLRRLL
                     ADRKITIELTQAAKELLFMEGFDRAYGARPLKRAIQKLVQDPLALKILEGEVKHGDHV
                     IVDADVPKRQMTFAVSGQSKPEPAAKRPATKK"
     gene            complement(12018..12482)
                     /locus_tag="VE783_11710"
     CDS             complement(12018..12482)
                     /locus_tag="VE783_11710"
                     /inference="COORDINATES: protein motif:HMM:NF012241.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Hsp20/alpha crystallin family protein"
                     /protein_id="HYX54109.1"
                     /translation="MTMITRIDPFRELATLQDRFNSLFENFAEGNGKEQLAAGHFVPP
                     VDVYEDEQNLVLKLEVPGMNEEDLKVSVENNTLTVSGERKFEKEEKEENFHRIERRYG
                     SFTRTFRLPNTVDQDKADASYDKGILKITLGKRAEAKPKQIKVGSSQKTLQG"
     gene            complement(12647..13852)
                     /locus_tag="VE783_11715"
     CDS             complement(12647..13852)
                     /locus_tag="VE783_11715"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF022137.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006364 - rRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent rRNA methyltransferase"
                     /protein_id="HYX54110.1"
                     /translation="MAKSPEIKRVVINDRAAARLRAGHVWAYASDVLNEGGADPGALV
                     HVLNTRGKLLGSAIFSSASQIKVRLVSRDAIQSEAEFQERVRQRLAAAVEYRRRLVRD
                     TDAYRVVFSEADLLPGLIVDRYQDICTFQILAQAWDSDARRKLIVSQIQGLSGVTSIV
                     ERVDARIRELEALPSRESALIAGERSATVFTMNGVQFHYDALSGQKTGAFLDQRENYA
                     AAAHYARGEALDICTYQGGFALHLARRCVRVTGVDISREALEVAEQNEKLNSAAHKNE
                     IEWLEGNAFDLMRDYADAGREYDTIVVDPPAFAKSKKNLPSAMRGYKELNLRALKMLR
                     PGGVLVTCSCSFAVSEQEFLAVLTEAAQDAHRSVTVLETRAQAKDHPVLLGVPETHYL
                     KCVICTVPA"
     gene            complement(13886..14704)
                     /locus_tag="VE783_11720"
     CDS             complement(13886..14704)
                     /locus_tag="VE783_11720"
                     /inference="COORDINATES: protein motif:HMM:NF014630.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C4-type zinc ribbon domain-containing protein"
                     /protein_id="HYX54111.1"
                     /translation="MNSDLHNLIELEKVDREIARLTDEIAALPRRVAEIEGKLADDKA
                     AVEKARQAIKNNEANRRKYESDIQACQQKIVKYRGQSSSVKTNDEYRALMHEVEFAEK
                     EISGCEDKILELMISLENDEKKLKAAEADLKAESVAVEKEKEEARKRTATDEDQLKTL
                     NAQRTQLRGTVGDSALAHYDRVLRQRKTAIAEAREQKCQTCFVMVRPQTWEELKTNEQ
                     IITCSSCGRILYYDPAHAPALPPEAAKKKRSRAADAEPEAEATTETAPEISSAQ"
BASE COUNT         2980 a         4446 c         4273 g         3277 t
ORIGIN      
        1 agcaggccta gcgtgagagg tagatcagta tcgtgcgaga agtattttat gttctgcgcg
       61 cgcccgtcct cttccagaat gaaatcgtct ttggtcaggt tgcgcatgat ctggccatgt
      121 ttgtcgcgaa ctgtcgccgg cacgttcacc actttcactg tgactgagag cgaaggctgc
      181 tggctgtttg ctgagtctgc ggcccgctgc ccgctgagaa acatgccggt ggaaatcagc
      241 gcggcgattg ctacgattct gcttattcga gacattcaac atcctgagcc tgcgtaggcg
      301 tggtttgaaa gagcaggcat atctggagtg cgttctgtct taatgggaac acatgccggg
      361 taggtagttg cgttaagaag tgaaaagcgg gatgtaaaaa ggctgtaagg gaattgagcc
      421 tgggatcgtg cagccaatca gctcattggc tttcgaatcg aatgcttcct gaacaccacc
      481 ttcacgccct cgcgccagcg ttcgtccaca cccatgagtg tccactcaat ctccggcgaa
      541 aagtagcgta gcacggtatc aatcgacgga tgaacacgca gcgccggcgc caccatcatg
      601 agcagcggcg gcttcggcga gagctccacg ccggcgaaat agccgtgcgc ctggaactcg
      661 tccctgtggt ggtgccactt cacccgcgac caataatcga gtccctgcat cggcaggtga
      721 atgtcttcat cggccttcaa ctccaaaacc gcaagtcggc cgtctcgagt tcgcgccagc
      781 acgtcaatca ttgcgcgatc tgacgctgaa aacgctggta cctgcgcgta aacgtgggcc
      841 ggatcaagac ggccgtcaat cgccgccacg ttgctgaaga ccagcgattc caaccagcgt
      901 tcgggataca tacgccacag cggatcgtga cgattgccgt ccagcgtgcg ggcgtctcga
      961 atggtcgcag cgaactggcg gaacatgtcg tggttctcgc ccgtaagcgg cgcctgatat
     1021 ccgccaacgc cgaagacgaa ttcctccgtc atgtcaaaac tgccgggcgc gttcaaaagg
     1081 cgcgctttgg caaactccat gccgtgcaga cggaacgaaa tctccgtggg tgagagcacg
     1141 gccacttcag cattcggcac ttcagccaga actctcgcaa tcgccgagtg aaagcgcgac
     1201 cgcgtcttct catgatcagg gcagcggacc aggcgtgtat tgatgttgcc cgtgtcggcg
     1261 cagtcaattt cggcgagcga ctcgtctagc tcatccagtt catggagctg gaatttggcg
     1321 gccgaatggt tgagctgtgc catacgtatc cgcagagttg ttgaactccc aggcggcgcg
     1381 aacagtttca cgccttccac cacgctctgc ccagcttcgc gctcgcggca gtggtccagc
     1441 cagagcaggc cgaaagtcag cgccgcgtct atggaactct gcgtctcctg ctggtttact
     1501 cccagcaccg ccgccgcgct gcgtcccttg cgaagcagac cgcgcgcgta tacgggagag
     1561 aagctacgct ccaggtccat ggtggtggag agccggtcaa gcttccagtc cggaaactgg
     1621 cgtcgcagcg tgtgttcaag caggcgggcg tagctcttgc gagcggcggt gcgggcgctc
     1681 tggctccggc ggtcccgatc gcgacacaac tccagcttgt gcggacggtt ctggccaaag
     1741 cgctgcacgc tgagaatcaa agatccgttc tttgcctcgg cgtctattac ctgccgcaca
     1801 atgttccgtt cttcggacca caggtgcagc atgcatcgtc cgcggtcggc agagactgag
     1861 tattgcgcaa ccgctagatc gaagatgatc tggtcgtctt ccagcgccac accgctgcgc
     1921 gcttcagaga gaaattcctg cagcgaccgt gctaagagtt cagggctcat tcaggaaggg
     1981 cagcgtgcgg cggttggcct ccgcacgccg gagttcattt cacaatcaat atgaagccct
     2041 gactgttcgt gcccgcggag ctgccagtcg cggtcaccac cacggtgtat gttccagcag
     2101 gcgtgccatt cggattcgga gttggagccg gagtcggagt cgggacgaaa ttattggttc
     2161 ctccaccacc cccgcaacca gtgatggcta cgattacgag caaggcgcag aacgccgttg
     2221 cgggccgcag tccccggctc ctttgcgacg caatcagaag cgtgagtgcc ataaccgcga
     2281 aaacaaccac aggcatggaa ggcattgtgc cttgcgggaa tcggaagctg aatgcaccag
     2341 cgcgggacgt ggtggtcacc gtgagtgtga cgttccctgc ctgagtcacc gacgctggat
     2401 taaagccgca agccgttccc ttgggaagtc cggagcacga gaaggttacc gtgccggccg
     2461 atgcagccgg agttacagca aagccgaacg tcgcagcctg tcctgcggtc accgtgtctt
     2521 gaaccggatt gggaaccatc tggatcatcg gatcaatgtt gaaaggagcg ctggcagtat
     2581 tgttgttggg ggtggtgtcc cctcccccgg aaatagttgc gctcacactt accagcgaga
     2641 tcgttgcgtt gttggctacg ttgaaagtaa cgttaatggg tgagaacccc tggcttccgc
     2701 cgagcgaatc tgaacgagtg caagtcgtag ttgccagagt acatgtccat ccttgtccgc
     2761 tgatatccac cgcactcagg ccggcgggca aactgtgagt cacggtcagc agaccggaag
     2821 acccgctgtt tccgaaattt gcgatcacaa ctctgtacgt ggcattcgtc tgtccctgaa
     2881 tgacattgcc ggtaatcaga gtgatctgcg gagtgagatc gataactggg gtgaagattg
     2941 aaacaacatt acttaccgca tcattcgccg tgttcgtttc tcctccacct gctacggtgg
     3001 cagttgcggt tgcggaagcc ggtgcattag cagcaacatt caccgaaaga gaaattgctg
     3061 gataacttcc aaatccggcc agcgcgtcat tgcgggagca tgtcactgtc ggaaggtcgc
     3121 atgtccagcc cactccgctg agagacgcag ggctcaatcc tgcggtcaaa gctacggttg
     3181 cagtcacggt ggcgctggtc ggggctgcac ccgcgttcga cacggtaatg gtgaagctgc
     3241 ccgtttgacc ctgcaggaag gaaagcggcg agttccccat ggtgacggtc agatcaggta
     3301 ccagcggcac gatcgtggtg ctgtcctgag ctgtgtcatt ggtcgtgttc aactccccac
     3361 cacccgatac agaagcggaa ttcacaactg ttgccggtgc gtttgtggcg acgtcgacga
     3421 taagagtgat cgccgggatc agtgcgtttg cggcgaaagc gtcagatcgc gtacaggtta
     3481 gtgtagccag agcgcaagtc caacccgtgc cgctaagaga agtagccgtg agaccctgag
     3541 gcaaagtatc ggttacggtt atggtgccgg tcgtggctgc attgccctga ttcgaaacgc
     3601 tcaggttata gacagcgcca gtttggccct gggaaaagtt ccccgcatgg ttcttgaaga
     3661 taaccagatc cggcgcaatc ggctggttca ccgtcgttaa atccaatgca atgtcattag
     3721 cggtgtttgt ctctccgccg cccgagaccg tggcctggtt agtcacgaag gttgcggtat
     3781 tgaaagctac atcgactaca agcgatatag gagggtagct gttgcccacc gcaagcacgt
     3841 cacttctggt gcaaaccaga ggactgagcg tgcacgtcca gccagtgcca ctgatagtct
     3901 tggcggtcaa ccccgctggg aggctatcgc tcacagaaac agccgcagtg gtcggaccaa
     3961 gaccaatgtt gctgacgacg atgttgtacg aaccggtctg ccctgcgggg aagtttccgg
     4021 tgtgcgactt gcttatggtc agatccggag ccgtgctcac attgattgtg gcggtcgccg
     4081 tgaagcccgc ggagcgcgtg tccgttacgg tcaaggtttg ttgccccagg gtggccagtg
     4141 ttactgaaaa tgtgtggacg cctgcatcgg cgctggtgaa cgtgtaatcg gccggaagaa
     4201 tcgcgtttgc atccgagctg gtgaagtgca ctgtgccggt gtaattcgta agattctgaa
     4261 gggtattgct gctctcgact gtcagcgtca cattgaatgc ggttgagggt accaccccgg
     4321 cgggcgcgtt cagcttgaag atgggcggtg cggccacgca gtcgttctga aggttggaaa
     4381 attcctgctg caccatgtag gtgttcctgc caacactcac ctgtgtgtcc tgcccgttgc
     4441 agatgtctcc gatttcggcc aacggattgg ctgcaggatc gggatcatac caggccagcg
     4501 gcggggccgt tgtcgtcgcg ctacccactt gcggatcagt gatcgcttca gacagctcgt
     4561 ggctcgtaac cgcggtgact tgatcgaaca gggttcccgc cccgcaaccg gttgagcagc
     4621 cgctcggcgg cgcgaagtct ggctgcacgc catagggaat caggcgggtc gctgtattgg
     4681 aatggtaggc acagaacccg ttcgtaacgc agctgttcgt tcctcccacg ttgatgctca
     4741 cccccggcgg gaagtagatc atgtaaaacg tattcacgtt accctgggta tcggttacgg
     4801 gttgcggaag accgccgttg ttgagctgcc gcagaagctc ctgctgaatc tgcacgtcgg
     4861 taagggaaca ggttgcggtg gtcgcgcaga gtgccggagt aatggtaaat ttgccatcga
     4921 acacgccgcg gctgatcgcc tggttgctgc tcgtcgccgg tactccagat cctgtaattc
     4981 ccgtcgtgct gtactcggtg agcaggtcgt agtactggct ctgagtgata tctgtgaaga
     5041 actgatcaat cccatttgcg cctgtgatgg cactgttaac acccgatccc cagaaaactg
     5101 cgacgacatg cacttgcgag atcaccggac caccccagta ggtcaggtgg gctcccgccg
     5161 cagcgaaagt attcttcagt ttttgcgagc ccctgccgaa cggcacgatg tgtaccggac
     5221 cagcaggaag agtcgcgata gactgcgcga cagggccgcc tgtgaccttg ttcagagttt
     5281 ccgaaggcgt gccttgatct tcgttccctt tttttggcgc ctcctgagct gtgagcgtgc
     5341 atccgaacaa acaaagcacc agtgacagga ttccgctact cacgcatgtc cacctgggaa
     5401 ttgcaaaggg agatcttgaa gtcggccggg cagggtgggg cataaacagc tccttaaact
     5461 aagcgaggtc ttagacagct agagctacgg tggtgcacaa ggggagttgt agtttacgaa
     5521 ccagagttgc tgctcgtcaa tggaaaagac gctgaagcag gctggaaatc tgcgatttac
     5581 gccagttgac gaaacccttg gcggacgttg tgcttcatcc ccaacaggag caatagcttt
     5641 ggcctatgca caaattgcct caagtcgacc ttccgatttt tgcctgtgac cctgaatggt
     5701 gtgacaatag aagtaacaca ggttgggtcg ttcccggccg cgcagtcatc taattgagag
     5761 ttcatgacaa atcagcccat tttttaccag aagttcggca ttacctctaa cgatctgcag
     5821 cgctatctcg cggaggccct ttccgccggc ggcgagtacg ctgacctgta ttttgaatat
     5881 ctgacaacca cctcaatcac ggtggatgag tcgctggtta agtccgccgc gcagggaatt
     5941 tcggcaggtt gcggcattcg cgtgctctcc ggcgagcgca ccggctacgc ctacactgac
     6001 gatcttgctc cggaaaagat cctgcgcgcc gcccgcaccg ccgccctgat tgccagcggt
     6061 cccagcaaag agccagtgca aggcttcaag gaaacgcagg gccaccagct ctaccaggtc
     6121 tccacgccat cgtcagatgc tgatatcgcc gccaaactcg aactggtcgt gcgcgctgac
     6181 cgcgccgctc gtgcctatga tgctcgcatc gtccaggtgc gcgccagtta cgtggatgag
     6241 agccggcaga ttctcgtggt cggctctgac ggcacttttg ctaccgacgt tcagccgctg
     6301 gcccgcttca gcctgactac catcgccaaa tccggaccca actccgcgcg cggaaccgca
     6361 ggcggcggtg gccgcgtggc tctggacttt ttccaaacgg aaaagacgcc cgaatactac
     6421 gctcatgagg ctgcccgcca ggccatcatc cagctcgacg cacgcgaagc gcccgccggc
     6481 gagatggaag tggtcctggg tcccggctgg cccggcattc tgctgcatga agccattggc
     6541 cacggccttg aagcagactt caaccgcaag ggcacgtccg cgttttccgg gctgatcggc
     6601 aagcgcgtgg catcagagaa gtgcaccgtg gtcgataacg gcacgctgcc ttcgcgccgc
     6661 ggctccatca acgtggacga tgagggttcg ccgacgcaga acacggtcct gatcgaaaaa
     6721 ggaattctca agggctacct gagtgacaag ctttcttcca aactcatgaa gatgcccgat
     6781 accggcaacg gccgccgcga aagctatgag cacatcccca tgccgcgcat gaccaatacc
     6841 tacatgctct ccggcgatga cgctcccgaa gacatcattc gttccgttac tcgtggcgtt
     6901 tatgcggtga acttcggtgg cggccaggtg gacatcacca atggtaagtt cgtcttctcc
     6961 acctctgagg cctacctgat tgaaaacggg aagatcactg cgccactcaa gaattgcacg
     7021 ctgattggca atggcccgga cgcgctgacc aaagtctcta tggtgggcaa tgatttgcaa
     7081 ctcgatgaag gcgtgggtac ctgcggcaaa gatggccagt cagtcccggt gggcgtcggt
     7141 attcccacca tcaaacttga cagcatgacc gtgggcggaa cggcaaggta gtagatggcc
     7201 accaacactg aaactctttc cggcgcgcaa gcctctctgc gcgaagtcgc aacagaaatc
     7261 attgatcgcg ccatgaaggc tggcgcaact gcggcagatg ctttggtgcg cgaaggcaca
     7321 gaattctcca ccgttgtccg gctcggccag gttgagaccc ttaaggaagc aggctcccgc
     7381 ggcgctggac ttcgcgtctt catggggcag cgagtcgcca gcacctactc gagcgatctc
     7441 tcctcggagg gaatcgacta cctcgtgaaa ggtgcccttg agctcgcgcg cgtcacctca
     7501 gaagatccct tcgtgagcct tcccgagccg tctcagctcg gctctgtctc cggtgatctc
     7561 aggctgtatt acgacgatgt ttactcgctt ccgccggaag aacgcattga ttacgcccgc
     7621 cgtgccgagc gcgcggccct ggaaagtgat ccgcggctga agaactctga aggcggcagc
     7681 tttgatgccg cgaccaccca tcgcgtgttc gccaactcgc tggggtttgt tggggaatac
     7741 agcaagtcca attgttccat tgctgctgta cccatcgccc aggatgaaaa gggcgccatg
     7801 cagcgcgact actggtactc ttccgcccgg acgctcgcaa agctggaatc gcccgaagcg
     7861 gttggacgtg aagccgcgcg ccgtaccttg cgccgcattg gagcacgcaa gatcgcgtca
     7921 acggccgcca ccatcgtgct ggatccccag atggccggct cttttctcgg caatattttt
     7981 gaggccgcca gcggcgattc catctaccgc cagtcctcgt tcctggtgga aaaacttggg
     8041 aagaagattg ccggagataa cgtgaccgtg attgacgacg gcaccatgcc cggagggttc
     8101 ggcacctcgc cgttcgatgg tgaaggtatt cccacgcgga agaccgtggt agtggaaaat
     8161 ggcgtgctga attcttatct gctcaacacc tacacggcgc ggaaactcgg tttgaagacc
     8221 accggcaacg ccgtgcgcgg cctggcaggg aatccgggaa tcgggaacgg aaatttttat
     8281 ctcaagcccg gcaagcattc tccccagcag ataattgccg gcgtgcagcg cgggctttac
     8341 gtcaccgagt tccttggctt cggcgtaaac atggttaccg gagacttctc ccgcggcgcg
     8401 agcggccaat ggatcgagaa tggcgaattc gcatacccgg ttgaggagat cacggtggcc
     8461 ggaaatctga aagacatgct caacaacatc gtggaaattg gggacgacct ggtgttccgc
     8521 agttctgtgg catgtcccac gctgcgcatt caaggcatga ccatagcagg ggagtaggaa
     8581 cagtagtcgg gttcccggcg tctattcagc agtagtaaaa tcaaccgctg atggctgatc
     8641 cacaaccgaa tccgcccgaa accgagcagt cttcttacgc ccccgccgag ccggagagca
     8701 gcagcaagct gccgatggtc atagggctgg cggtggtgat tgtggtcatc atcgctttca
     8761 tcatctttgg acgtggcggc tcatcagaga acgccaacca gcaggacccc tacatctcca
     8821 aactccagat ttccaaccag cacatggcca cggcggaaaa ctttgccggc ggctccgtca
     8881 cctacatcct gggaaccgtc gccaacaccg gcgacaagaa gctctccggc gctcgcgtgc
     8941 aggtgttgtt taaaaattct ctgggagaga tcgcgcagaa agagacttta ccgctgaccg
     9001 tcctgctgcc gaacagccct tacgtggatt acgctccact cgatcgcgcg ccgctgggcg
     9061 ccgggcagca acgcgacttc cgcctgactc tggagcacgt cacggctgat tgggacgggc
     9121 aggtgccgca gatcaaagtc gtatccgtaa cctactgaac atagaaaacc tgcactggcc
     9181 cgcgccaatg caggtctccg tttcgaagct tacttcttcg tagctggccg tttggccgca
     9241 ggctccggct tgctttgtcc acttaccgca aaggtcatct gccgtttcgg cacatcagca
     9301 tccacaatca cgtggtcacc gtgcttgact tcgccttcca ggatcttcag agccagcgga
     9361 tcctgcacca gcttctggat ggcccgcttg agcggacgcg ctccatacgc ccggtcaaag
     9421 ccttccataa acagcagctc cttggctgcc tgcgtgagct cgatggtgat cttgcggtct
     9481 gccagcaggc ggcgcagatc gtcaagccgc agctcgatga tcggcatcaa ctgctcttct
     9541 cccaatgggc tgaacaccac aatgtcatcc acgcgattga ggaattccgg acggaagtgc
     9601 tgccgcagcg cctccattac gtgctccgtg gcttcggcaa atgcctctgc cgacgccagg
     9661 ccttccgcct gcaagtagct cgcgccaatg ttcgacgtca tgatgatcac cgcgttcttg
     9721 aaatccacgg tgcggccttt ggaatccgtg agccgcccgt catcgagaat ctgcagcagg
     9781 acattgaaga catccgggtg cgccttctct atttcgtcga acaggatcac gcagtaaggg
     9841 cgccggcgaa cggcttcggt cagctgcccg ccttcgtcat agcccacgta tccgggaggc
     9901 gcgccgatga gccgcgccac cgcgtgcttc tccatgtatt ccgacatgtc aatgcgaacc
     9961 atggcatgct cgtcatcaaa gagaaactcc gccagagcgc gcgccagttc cgtcttgcct
    10021 acgccggtcg ggccgaggaa gatgaacgag ccaatcggct tcctgggatc gctcagccct
    10081 gcgcgcgaac ggcgaatcgc attcgcgacc cggctgagtg cgatgtcctg cccaatcacc
    10141 cgctggcgca gccggtcttc catgttgacc agcttcttca cttcgccttc cagcatcttg
    10201 gataccggga tgccggtcca cttggaaacg attccggcta cgtcttcctc gtcaacttct
    10261 tccttcagca tgcggttctg ctgggcgtta ccgtctgcct gcgcgttgag tttggtgagt
    10321 tcggcttcgg cctggcgcag ttcgccataa cgaatggaag ccaccttctc caggttacct
    10381 ttgcgctccg cctgctgttc ttcaatcttg agctgctcaa tgcgctcttt cagctcgcgg
    10441 attttcgtga tgccggattt ctcttctttc cagcgagcct tcagcgcgtt cgactgctcg
    10501 cgaatctgcg ccaactcgcg ttccacggcg gccagccgct cgcgtgagtt cgggtcgtct
    10561 tctttcttga gcgcctgctt ctcgatctcc agctgcgtcg ctttgcgctc gagctggtcg
    10621 atctccgtgg gcatcgagtc aatctgaata cgaagcgatg ccgccgcttc atcgatcagg
    10681 tcgatagcct tgtccggcag gaagcgatca gaaatgtagc ggtgcgaaag cgtcgccgcc
    10741 gccacaattg ccgaatcctt gatccgcacg ccatgatgca cttcgtagcg ctccttcagc
    10801 ccgcggagga tggaaatcgt gtcttccacg ttcggctcgc cgacaaatac gatctggaac
    10861 cgacgctcca gcgcagcatc tttctcgatg tacttgcggt actcgttcaa cgtggttgcg
    10921 ccaatggcgc gcagttcacc ccgcgccagc gccggcttca gcatgttgct ggcgtcaatt
    10981 gcgccttcag ccgctcccgc gccaaccagc gtgtgcagct cgtcaatgaa cagaacgatc
    11041 tgtccgtttg agtcttcaat ctccttcagg atggccttga gccggtcttc gaattcaccg
    11101 cgatactttg ccccggcaag catcgagccc agatcgagcg agaccacgcg cttgttcttc
    11161 aggatctccg gaacatcgcc gttgatgatc cgctgcgcca gaccttcaac gatggccgtc
    11221 ttacccacgc ctggttcgcc gatcagcacc gggttgttct tggtccggcg ggaaagcacc
    11281 tggatgacac ggcggatctc gtcatcccgg ccgatcaccg gatcgagctt gccgcgacgc
    11341 gccagttccg tcaggtcttt ggcatagcgc tccagcgcct ggaacttgcc ttcaggattc
    11401 tggtcggtaa cgcgctgcga gccgcgaaca gccgtcagcg ccttcaagat tccgtcatag
    11461 gtcacacccg cggccgagag aatctcctgc gcttcattgg cgcgatcgcg agtctcgctt
    11521 gcgctcatcg ccagcaacag gtgctccgtc gagacatatt cgtccttgaa cttgtcggct
    11581 tccttgaatg cctgatcgag caccttctgc atcggggaag agagatgcgg ctgcgcggcg
    11641 gagcccgaga ccttcggcag acgatccacc cgctgctgcg cctgctgctc aacattgccg
    11701 ggattcgccc cgagcttggt aaggatgggc acaacaatgc cctcgcgatc ctgcaccagc
    11761 gccgccagca cgtgaaccgg catcagctcc ggattgccgt tctgtgaggc cagctcgctc
    11821 ccctgctgaa tcgcttcctg tgatttgact gtgaatttgt cccaacgaat tgccatataa
    11881 aatccctgcc taaatactta tgacgcgcgc cacgcgttat tcgcgccgct tttttcgcca
    11941 gtttcatgtc tgctcttcaa aaaaaaatcg ggaggcgcac aggcctcccg atccgtttca
    12001 ccggaggtcg cagccaatta gccctgcagg gtcttctggc tggagcccac cttgatctgc
    12061 ttgggcttgg cttccgcgcg cttgcccagc gtgatcttca ggatgccctt gtcatagctg
    12121 gcatccgcct tatcctggtc caccgtgttg ggcagccgga aggtgcgggt aaacgagcca
    12181 taccggcgct caatgcgatg gaagttctct tctttctctt ccttctcgaa cttgcgctcg
    12241 ccgctcacgg tcagggtgtt gttctccacg ctgaccttca ggtcttcttc gttcatgccc
    12301 gggacttcca gcttgagcac cagattctgc tcgtcttcat agacgtccac tgggggaacg
    12361 aagtgcccgg ccgccagctg ctctttgcca ttgccctcgg caaagttctc aaacaggctg
    12421 ttgaaccggt cctgcagcgt tgccagctca cggaaggggt caatgcgggt aatcatcgtc
    12481 atggttctta ggtcctccaa tgaatttgcg tttctaaaat tgccttcact gcatttgatg
    12541 catagttgat tacgaaagaa gcataaaata tgagtgttgt gctgtcaagt gttaaaagac
    12601 agctatattt acttgttttt caatcagtta acggaaagat gttgttttac gccgggacgg
    12661 tgcaaattac gcatttgagg taatgcgtct ctggaacgcc gaggagcaca ggatggtctt
    12721 tggcttgagc ccgggtctcc agcacggtta cggagcgatg ggcgtcctgg gcggcctcgg
    12781 tcagcacggc caggaattcc tgctcgctga cggcaaaaga gcaggagcaa gtcaccagga
    12841 cgccgccggg ccgcagcatc ttgagcgcgc gcaggttgag ctctttatag ccccgcattg
    12901 ccgaaggcag gttcttcttt gacttggcaa acgccggtgg atcgaccacg attgtgtcat
    12961 actcccgccc ggcgtcggcg tagtcccgca tcagatcgaa ggcgttcccc tcaagccatt
    13021 caatctcgtt tttgtgtgcc gcagagttga gcttttcatt ctgctcggcc acctcgaggg
    13081 cctcgcgcga gatgtccacg cctgtcaccc gcacacacct tcgggccaga tgcagggcaa
    13141 atccaccctg gtaagtacag atatccagcg cttccccgcg ggcataatgg gcagcggcgg
    13201 cataattttc ccgctgatca agaaacgcgc cggttttctg gccactgagc gcgtcatagt
    13261 ggaactgcac cccattcatg gtgaatacgg ttgcgctgcg ctcgcctgca atcagcgccg
    13321 actctcgcga aggaagggct tcaagttcgc gaatgcgcgc gtccacccgc tccacaatac
    13381 ttgtgacgcc ggaaagcccc tgtatctggg agacgatgag cttgcgtcgg gcatcgctgt
    13441 cccaggcctg cgcgagaatc tggaacgtgc agatgtcctg gtagcgatcc acaatcagtc
    13501 ccggaagcag gtctgcctcg ctgaagacga cccgataggc atccgtatcc cgcaccagcc
    13561 gtcgccggta ctccaccgca gcggcaagcc tttgccgtac ccgttcctgg aactcggctt
    13621 cgctctggat ggcatcgcgc gacacaagcc gtactttgat ctgggaagca gagctgaaaa
    13681 tggccgaacc cagcagctta cccctggtgt tcagtacatg gacgagtgct ccagggtctg
    13741 cgccgccttc attcagcaca tcagaggcgt aggcccatac gtgcccggcg cgcagacggg
    13801 cagcagcgcg gtcattgatc accactcgtt tgatttccgg agactttgcc atcaggcaag
    13861 aaggataaag gaaagcagaa ctcttttact gagcagatga aatttccgga gcggtttccg
    13921 tggtggcctc agcctcaggc tcagcgtccg ccgcgcgcga gcgtttcttc ttggcagcct
    13981 cagggggcag cgccggagcg tgcgcaggat catagtagag aatccttccg caagagctgc
    14041 aggtgatgat ctgttcgttg gtcttgagtt cttcccaagt ctgcgggcgc accatgacaa
    14101 agcatgtctg gcatttttgt tcgcgcgcct ccgcaatggc agttttacgc tgccggagta
    14161 cgcggtcata atgagccaga gcgctgtctc cgacggtgcc gcgaagctga gtgcgctggg
    14221 cattgagggt tttgagctgg tcttcatccg tggctgtccg cttgcgcgct tcttctttct
    14281 ctttctccac cgccacagac tcagccttca aatccgcttc tgccgctttg agcttcttct
    14341 cgtcgttttc cagcgagatc atcagctcaa gaatcttgtc ttcacagcca ctgatctcct
    14401 tttccgcgaa ctccacctca tgcatgaggg cccggtattc atcgtttgtc ttaacactcg
    14461 aggattgtcc gcgatatttg acgatcttct gctgacaggc ctggatgtcc gactcgtatt
    14521 tccgccggtt ggcctcgttg ttcttgatgg cctgccgggc tttctccacc gcggctttgt
    14581 catcggccag cttaccctca atttcggcca ctcgccgggg cagggcagcg atttcatcgg
    14641 tcaaccgagc gatctcccgg tccacctttt cgagttcaat caggttatgg aggtcagagt
    14701 tcattggggg ctcatgtgat tttagcacgc taaattcgcg cttcagggcc gtattagagc
    14761 catttactag gtttttctcc cgattgtggc gctccagcca gcaccataga gttgacggag
    14821 gatgattgtg gaagtcacaa gattgctgct gggcgtgctg attgcgatat ttcaccgccc
    14881 gctcgcagcc aggatcatgc actacgaacg ctctctggac cacattatcc gcagccgcgg
    14941 ctggaacctt cccgcgccgc ccagtgacgc caccgc
//
LOCUS       DASQYP010000360         8515 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_163504, whole genome shotgun sequence.
ACCESSION   DASQYP010000360 DASQYP010000000
VERSION     DASQYP010000360.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 8515)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8515)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8515
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_163504"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..266)
                     /locus_tag="VE783_11725"
     CDS             complement(<1..266)
                     /locus_tag="VE783_11725"
                     /inference="COORDINATES: protein motif:HMM:NF013253.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-hydroxy-acid oxidizing protein"
                     /protein_id="HYX54112.1"
                     /translation="MKLEELITLGDFEVAAPQHMSPMAHAYVSGGAADELTLRANEED
                     WKRLRLKPRVLVDVSELDLRTEILGQKFELPILLAPAAFHRLCCP"
     gene            366..2798
                     /locus_tag="VE783_11730"
     CDS             366..2798
                     /locus_tag="VE783_11730"
                     /inference="COORDINATES: protein motif:HMM:TIGR03434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HYX54113.1"
                     /translation="MNNLLQDIRYAARRLRKTPGFTTIAVLTLALGIGANTAIFTVIN
                     AVLLKPLPFEDPGRLVLLSERILPQFPILSVSYQNYKDWREQSKSFTGVSAIQNLQMT
                     LTGQGDPERLPAQRANANLFEVLGAEAAKGRAFLPQEDTAGAPGVVLISYSLWQRRFG
                     GSENILGQAITLDNKPFVVVGILPPRLQVLQQSPDVMIPLEPWAKTLPDDRSWHPGIL
                     PIARLKPGVSLEQARAEMETIAKRLEKQYPEFDTGTGANVNLMQDQMVQNVRPALLMI
                     LGAVGFVLLIACTNVANLLLARATARQREIAVRTAIGASRWRVIRMVLTESLLLSISG
                     AVLGLLLAWNSIPALLHLGGTSIPTFGVVHIDTQVLAFTVVLAVFAGLLFGLAPAMHM
                     AGLDLRSALNQTDRGAVGLGVLRARGALVVSEVALAMLLLVGAGLLIRSFARLTNVGP
                     GFSTDHILIADMPVSPGGHANATERMEYFDRVLERAAALPGVRSAGAATFLPVSGTGA
                     VIHFNIQGRPPKSPHEYTMASYRAVAPGYLAAMGIPLLKGRVIVDSDRENAPAVVVIN
                     QTMANTYFPQQSPIGQHLQLGAEPDKSMPQMEIVGVVGDVKQSLASEAPTEMYVPFRQ
                     ADAVLPVFNVSLVLRTAAEPRSLAASLTSAVHEIDANQPLVNIRTMEENVATSVAQPR
                     FRTVLLAILAGLALLIAAVGIYGVMSFAVSQRTREIGTRMALGSSPAQVFQLVIGDGL
                     RLTAIGVVLGLIAGAAFARYLSTLLFQVGAVDPLAIAAVTLLLIVVALIACYIPARRA
                     TRVDPTVALRYE"
     gene            complement(2857..3837)
                     /locus_tag="VE783_11735"
     CDS             complement(2857..3837)
                     /locus_tag="VE783_11735"
                     /inference="COORDINATES: protein motif:HMM:NF015724.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CsgG/HfaB family protein"
                     /protein_id="HYX54114.1"
                     /translation="MPRTIRLICVFAMLCASCMAQKKKRVAVLDFDYGTVTSYVAEIY
                     GTNQDVGKGISDLLVQKLVQDGKYSIIERKALDKILAEQNFNNSERANPATASKIGKI
                     LGVDAIIIGSVTKFGRDDKSKTIGGAALVPHTFGLGGVKRSEAKAVCGISARMVDVTT
                     GEILAAVNGAGESKRSGTSLVGAGGGHGGAGAGIFDTSAKNFGQTLLGEAVMEAVTSV
                     GSKLDDSATNVPAHKSEFSGLVADVSGNTIILNVGSKAGAHVGDKIEISRAVRTVKDP
                     ATGKVLKTITNKVGEATITEVDADSATATFNGSGAAKVGDVAKTPQADND"
     gene            4312..4983
                     /locus_tag="VE783_11740"
     CDS             4312..4983
                     /locus_tag="VE783_11740"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HYX54115.1"
                     /translation="MRILIIEDEPKVARLLTKGLEAEHYAVDLATDGEEGLQLATEID
                     YDAIVVDWNLPKLDGFNVLKKLRRQGSNARIMMLSGRDQIADRVMALQMGADDYVTKP
                     FSFEEVSARLQCLMRRPSEFLDKLCVHDLELDRMRHSVTRGGKPITLTQREYAVLEYL
                     MRNAGRAVTRTMVVEHVWNLGFEGLTNIVDVYINYLRQKIDQGHEKPLIRTERGVGYM
                     ITAEN"
     gene            complement(5057..5497)
                     /locus_tag="VE783_11745"
     CDS             complement(5057..5497)
                     /locus_tag="VE783_11745"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX54116.1"
                     /translation="MATSPPPSSSPSPVPAAGTRRPRRYRRWVILFLLIILVVPALGI
                     AGWTWITLHVSYSTGERVGYIQKISRKGWICKTWEGELAMVNIPGTTPQMFEFSVSDE
                     RIARQIMDAPGQRVALSYAQHKGVPTNCYGDTEYYITAVRVVAP"
     gene            complement(5703..7100)
                     /locus_tag="VE783_11750"
     CDS             complement(5703..7100)
                     /locus_tag="VE783_11750"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX54117.1"
                     /translation="MLHRVTAVLMLLLTLLSPAAGFDSYWHAEASRRIGEEFGFSEDA
                     RKIMQLGNFSPDFFGPVSEFASAKLPGKASDALNQYGQQNAQSRQAAIFLHFDNLSGE
                     LDSNQKFDFVFQHLLLNTQTALSSFGKLQGVDDRTRKTLILITLGASLHAVQDFYSHS
                     DWVHQDFSKFSTTAAAQPQPESMPNDGNTVNPASAFLSSAEALLRAGQTSAAQQATPS
                     PAPSPSPSTMRAPTWFEYREKMGDPAKWPFQIKTGLYPPRPGVLLTHTHMNHDNSRLV
                     YREYETPGQPLVQEAQYHQAGAVPARENDPASAAAHQAYAFNTAAAASSEWVRKIEEN
                     GDARAAIEMAKTWSLKPKEPKLLKELDAGLATEMALSCAAGKWDGEDPPADRGVLCKT
                     IIDQTVTPSSANSAANIEAIITGAITRLAFPLALKYTGKFWDVHRQYHILNTLTQGFA
                     APDGNYSFGATIKNP"
     gene            complement(7132..>8515)
                     /locus_tag="VE783_11755"
     CDS             complement(7132..>8515)
                     /locus_tag="VE783_11755"
                     /inference="COORDINATES: protein motif:HMM:NF024491.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="phospholipase D-like domain-containing protein"
                     /protein_id="HYX54118.1"
                     /translation="MATLPKQPREIPARHQKGKEGEVARALEHYRWLRWFAVISMLAI
                     VSWVAIALFGPVPDYKLRGHLPAQLDSPEFMQQLAALSGAQLQPHTHIEEIPNGVNFY
                     EAEIRAVQSAQKSVDWEAYIFQQGEIAQRIVDALTERARAGVEVNLVLDAVGSLSTPK
                     DFFRTLRLAGGHVTWYHPVRFYNWPRANNRTHRELIVIDGRLGFVGGAGVSDQWWHGE
                     PARHWWSTADPAWRDTMFAITGDAVRQMQGTFTENMLESSGQILAGDKYFSDAANSDG
                     AYSMVIDSSPSEGGSTRARVLFQTLIASAQKTIDVTTPYFLPDDSLRHELARAVRERH
                     VRVRIVVPGKHSDHGMTRSSSRGTYGELLEAGAEIYEYTPAMIHAKLMVVDGEWSVMG
                     STNLDHRSFGLNDEVNVAALDPALAARITADFERDVSASHRVTYQEWKQRPFWERGME
                     WVGWIIEREQ"
BASE COUNT         1760 a         2394 c         2545 g         1816 t
ORIGIN      
        1 gggcagcaga ggcggtgaaa ggcggccggc gcaagcagaa tcggtaactc gaatttctgg
       61 cccaggatct ccgttcgcaa atcgagttcg ctcacatcaa ccagaactcg tggcttgagg
      121 cgaaggcgtt tccagtcttc ctcgttagcc cgcagagtca gttcgtcagc ggccccgccg
      181 gaaacataag catgcgccat gggagacatg tgttgcgggg cggcaacctc gaagtcgccc
      241 agcgtaatga gttcttcaag tttcatgggg acgggaaagt atacgcctct cggggaccac
      301 cctcagatac aattcggagt cgtgttcgtc taaacagaga gcgctcaaat ctcagcttcc
      361 gccttatgaa caacctcctg caggacattc gctacgctgc ccgccgtctg cgcaagaccc
      421 ctggattcac cacgattgcc gtgctcaccc tggcgttggg aattggcgcc aatacggcca
      481 ttttcacggt aattaatgcc gtgctgttga agccgctacc ctttgaagat ccaggacggc
      541 tggtgttgtt aagcgagcgc atcctgccgc agttcccgat tctctctgtc tcttatcaga
      601 actacaaaga ctggcgcgag cagagcaagt ctttcaccgg cgtgagcgca attcagaacc
      661 tgcaaatgac cctcacggga cagggcgatc ctgaacgcct tccggcgcag agggcgaatg
      721 caaacctgtt tgaggttctg ggagctgaag cagccaaggg ccgggcattc ttgccgcagg
      781 aagacacagc gggagctccc ggcgtggttc tgatcagtta ttcgctctgg cagcggaggt
      841 tcggtggaag cgagaacatc ctgggccaag ccatcacgct cgataacaag cctttcgtcg
      901 tggttggtat tttgccgccg cgcttgcagg tactgcagca atcgccggac gtgatgatcc
      961 cgctggagcc atgggccaag acactgccgg atgatcgctc ctggcatccg gggattttgc
     1021 ccatcgcgcg gctgaagccg ggagtgagcc ttgaacaggc gcgcgccgag atggaaacga
     1081 tcgcaaagcg gctggagaaa cagtatccgg agttcgacac aggcaccgga gcaaacgtga
     1141 atttgatgca agaccagatg gtgcagaatg tgcgaccggc attgctgatg atcctgggcg
     1201 ccgtgggatt cgtactgctg attgcctgca ccaacgtggc gaacctgctg ctggcaagag
     1261 ccacggcgag acagcgtgag attgccgtaa ggacggcgat cggtgccagc cgctggcgcg
     1321 tgatccgcat ggtacttacc gaaagcctgc tgctctccat tagcggagcc gtcctcgggc
     1381 ttctgctggc ctggaactcg ataccggcgc tcctgcacct gggcggaacg agtattccta
     1441 cgtttggggt cgtgcatatt gacacacagg tgctggcgtt caccgttgtg cttgcggttt
     1501 ttgccgggct gctgttcggg ctggcacccg caatgcacat ggccggactt gatcttcgtt
     1561 cagcgctaaa ccagaccgac cgaggtgctg tgggactcgg ggtgttgcga gcccgcggcg
     1621 ctctggtggt cagcgaagtt gccttggcga tgctattgct cgtaggcgcc ggattgctga
     1681 ttcgcagctt tgcccgtcta acgaacgttg gcccaggatt ttcaaccgac catattctga
     1741 tcgcggacat gccggtctca cccggaggcc atgccaatgc aaccgagcgt atggaatatt
     1801 ttgatcgagt tctggagcgc gcggccgcac ttccgggtgt tcgctccgcc ggagctgcaa
     1861 ccttcctgcc cgtgagcgga accggtgcgg tgattcactt caatatccag ggacgcccgc
     1921 ccaaatcgcc gcacgagtac accatggcca gctatcgcgc cgtggcacct ggatatctgg
     1981 ctgccatggg gattccgctg ctgaagggcc gagttatcgt tgactctgat cgagagaacg
     2041 cgccggctgt ggtggtgatc aatcaaacca tggcgaacac gtatttcccc caacaatcgc
     2101 ccattgggca acatctgcaa ctcggcgccg agccggacaa atcgatgcca cagatggaaa
     2161 tcgtgggggt tgtcggcgat gtgaaacaat cattggcaag cgaagcgccg acagaaatgt
     2221 atgtgccttt ccgccaggcg gacgcagtgt tgcccgtctt caatgtgtca ctggtcctgc
     2281 gtacggctgc cgagccgcgc agcctggccg cgtcactcac aagcgcggtg catgaaattg
     2341 acgctaacca gcccctggtg aacattcgca ccatggaaga aaacgtggca acttcagtcg
     2401 cgcagccgcg cttccgtacg gttctgctcg cgatccttgc cggactcgca ttgctgattg
     2461 ctgcggtggg catctatgga gtgatgtcgt tcgcagtgag ccagcgcacg cgggaaatcg
     2521 gcacgcggat ggcgttaggc tcatcgccgg cgcaggtgtt ccagctggta attggagatg
     2581 gcttacgact gacggcgatc ggagtggtcc tcgggttgat tgcaggcgca gctttcgcac
     2641 gttatctttc cacgttgctg ttccaggtgg gcgcggtgga cccgctcgcg attgcggcag
     2701 tgaccctgct gctcatagtg gtggcactga tcgcatgtta catcccggca agacgcgcca
     2761 cccgcgtgga tcccacggta gcgctgcgtt acgaatgaaa gctctggaag gcaaaaagcc
     2821 cggcctttgc ggccgggctt ttattgagga agaagtttaa tcgttatcgg cctggggcgt
     2881 tttggccacg tcaccaacct tcgccgcgcc gctgccattg aaagtggcgg tggctgaatc
     2941 tgcgtccact tccgtgatgg tggcctcgcc aactttgttc gtgattgtct tcagcacttt
     3001 gcccgtagcc ggatctttca ccgtgcgcac tgcgcgggaa atttcaatct tatcgcccac
     3061 gtgcgcgccg gctttgctgc caacgttaag aatgatggtg ttgccgctca catccgccac
     3121 cagtccggaa aattctgatt tgtgagccgg cacgttggtt gcggagtcgt caagttttga
     3181 gccgaccgag gtgaccgctt ccatcacagc ctcaccgaga agtgtctggc caaagttctt
     3241 ggcgctggtg tcaaagatgc ccgctcccgc cccgccgtgg ccgccaccgg cgcccaccag
     3301 cgatgtgccc gagcgcttgg attcgccagc gccgttcacg gcggcgagaa tctctccggt
     3361 ggtcacgtca accatgcggg ctgagatgcc acatacggct ttggcctcac ttcgcttcac
     3421 gccgcccaga ccaaaggtgt gcggcaccag agcggcgccg ccgatggtct tggacttatc
     3481 gtctctgcca aatttggtga cggagccaat aatgatggcg tccacgccaa gaatcttgcc
     3541 gattttcgaa gctgtcgcag gatttgcccg ctcgctattg ttgaagtttt gctcagccag
     3601 gatcttgtcc agggctttgc gttcaatgat cgaatacttg ccatcctgca ccagcttttg
     3661 caccagcagg tcagagattc ccttgcccac atcctggtta gttccataaa tctcggcgac
     3721 gtaggacgtc accgtcccgt aatcgaaatc aagtacggca acccgcttct tcttttgtgc
     3781 catacagctg gcgcaaagca tggcaaacac acagatcagg cgaatggtcc gcggcatacg
     3841 aaaggctcct tacggcgatt aattttttgg ccaaaggggg aaaactctgg gcttatcgtc
     3901 cagagacttt aacacaggtc ttgacctgag gaagagtcga agtcgctgac cagggtaccg
     3961 ggaggtaact tgaaaaaacc ggtcagcgta gggaaaagga ccgtggtgaa tgattaaaga
     4021 gtgtgcaaat atttgcgtac aaattgcccg aaatgaaagg caccgcgaga ttttttaatt
     4081 ccgtgtgact gcggtcacat ccctgctgtg cttaagctgt cagactcccc taagaattga
     4141 ttctcgactg ggagcggtca atttccggct ttgccacttc agcatctggg atcaagggcc
     4201 cctccaaatt tccggcaata aggacactca gaagatcgct ccagaggcca agggaaggca
     4261 tgattcgacc cacaacacta agggcgatgc caccctggcg ggaggtggag tttgcgtatt
     4321 ttaatcattg aggatgagcc caaagtcgca cggctactga cgaaaggcct ggaagccgag
     4381 cattacgcgg tagatctggc gactgacggg gaagaaggcc tgcaactggc cacagaaatc
     4441 gattacgatg cgatcgtggt tgattggaac ctgcccaagc tggacggctt caacgtcttg
     4501 aaaaagcttc gccggcaggg ctctaacgca cgcatcatga tgctcagcgg ccgcgaccag
     4561 attgccgacc gtgtaatggc tctgcagatg ggcgctgacg attacgtaac caagccgttc
     4621 tccttcgaag aggtgtcggc aagactgcaa tgcctgatgc gccggcccag cgagtttctg
     4681 gacaagctct gcgtacatga cctggagctc gatcggatgc gccattcggt gactcgcggc
     4741 ggcaagccga tcacgctcac gcaacgcgaa tacgccgtcc tggaatacct gatgcgcaat
     4801 gccggacgcg ccgtaacgcg gaccatggtt gtggagcatg tctggaacct gggatttgaa
     4861 gggctcacca acatcgttga cgtgtacatc aattacctgc gccaaaagat cgatcaaggg
     4921 catgaaaagc cgctgatccg cactgaacgc ggcgtgggat acatgattac cgcagagaat
     4981 tgatttttac tgcgcgaaag ccaattgggg cctcatttgc gggaggcccc aaattgcttc
     5041 ttacggccga tcctatctat ggcgccacca ctctcacagc cgtgatgtag tattccgtat
     5101 ctccgtagca gttggtcggc acgcccttgt gctgtgcgta actcagggcc acgcgctggc
     5161 cgggtgcgtc cataatctgg cgcgcgatcc gttcatcact cacagaaaat tcgaacatct
     5221 gcggcgttgt cccgggaatg ttcaccatag ccaattcgcc ttcccaggtc ttgcatatcc
     5281 aacccttcct ggaaattttc tggatatagc cgacgcgctc gccggttgaa taagagacgt
     5341 ggagagtaat ccacgtccag ccggcgatgc cgagcgccgg aaccacaaga attatcaata
     5401 ggaagaggat gacccagcgg cgatagcgcc gcggacgcct tgtgcccgca gccggaacag
     5461 gcgacgggga tgaagacgga ggaggcgaag tggccatagg ttttctcgcg ggatacgcgg
     5521 tcattatggg gcagtgaata gcaattggca atcggctaaa gaatttcacc gcaaaagcgc
     5581 gcggagaacg caaaggcaag aaagggtcag ttacgtgaga ggctgcgaac ctcttgagta
     5641 atgaggcact cgtgcctgag cgagttcacc agcggccttt gcccccgcaa ttcctttttg
     5701 tcttagggat ttttgatcgt cgcaccgaaa ctgtaattcc catccggcgc ggcgaagccc
     5761 tgagtgaggg tattaagaat gtggtactgg cgatgcacgt cccagaactt gccggtgtac
     5821 ttcagtgcca gagggaaggc caagcgggta atcgcgccgg tgataatggc ctcaatgttc
     5881 gcagcgctgt tggctgacga cggagttacg gtctgatcaa tgatggtctt gcataggaca
     5941 ccgcgatcgg ctggagggtc ttcaccgtcc cacttgccgg cggcgcagga gagcgccatc
     6001 tccgtggcga gcccggcatc cagttccttc agtaactttg gctcttttgg cttgaggctc
     6061 caggtcttgg ccatttcgat tgcggcccgc gcgtcaccgt tctcttctat cttgcgcacc
     6121 cattcgctgc tcgcagcggc cgcagtgttg aatgcgtagg cctgatgtgc tgccgcggag
     6181 gcgggatcgt tctcgcgcgc aggcaccgcg ccggcctggt ggtactgcgc ttcctgaacc
     6241 agaggctgtc ctggagtttc atattctctg taaaccagcc gcgagttgtc atggttcatg
     6301 tgggtgtgcg tgagcagaac gcccggccgc ggaggataca gccctgtctt gatctggaac
     6361 ggccatttgg cgggatcgcc catcttttca cggtattcaa accaggtggg cgcgcgcatc
     6421 gtagagggcg acggcgatgg cgcaggcgag ggagtcgcct gttgtgctgc ggacgtctga
     6481 ccagcccgta acagtgcttc tgcagatgaa agaaacgccg aagcgggatt cacggtgttt
     6541 ccgtcattgg gcatggactc gggctggggc tgcgcagccg ctgtcgtgct gaatttgctg
     6601 aagtcctgat ggacccagtc ggaatgactg taaaaatcct gtacggcgtg cagcgacgca
     6661 cccaacgtga tcaggatgag cgttttgcgc gtgcgatcgt caacgccctg caacttgccg
     6721 aaagaggaga gcgccgtctg ggtgttcagg agaagatgtt gaaagacgaa atcgaacttc
     6781 tggttggaat ccaactcgcc ggagagatta tcaaagtgca gaaagatggc tgcctgccgg
     6841 ctttgggcgt tctgctggcc atactgattc agagcgtcac tggctttgcc gggaagtttg
     6901 gccgaggcaa actccgaaac cgggccgaag aaatccggcg agaagttccc gagctgcatg
     6961 attttgcgcg catcttcact gaagccgaac tcttcgccaa tgcgccgaga agcttccgcg
     7021 tgccagtagc tatcaaaccc ggctgccgga gagagcagag tgagcagcag catcagcacg
     7081 gccgtgacgc ggtggagcat cacaaaaagg tagcacagtt atttagggtg ttcattgctc
     7141 gcgttcgatg atccagccta cccattccat accgcgctcc cagaagggcc gttgcttcca
     7201 ttcctggtat gtcacgcggt gagaggcaga gacgtctctt tcaaaatcag cggtgatgcg
     7261 cgcggcgagc gccgggtcga gcgcggccac gttcacttca tcgttcaacc cgaatgaccg
     7321 atggtcaagg ttcgtggatc ccatcacaga ccattcgccg tccacgacca ttagcttggc
     7381 atgaatcatt gcgggcgtgt attcataaat ctcggctccg gcttcgagca gttctccgta
     7441 ggtgccacgg ctggagctgc gcgtcattcc gtgatcgctg tgttttccgg gaacaacaat
     7501 ccgcacccga acatggcgct cacgaacagc gcgggcaagt tcatggcgca ggctgtcatc
     7561 gggcaggaaa tagggtgtgg tgacgtctat ggtcttttgt gcagaagcaa tcagcgtttg
     7621 gaatagcaca cgggcccggg ttgagccgcc ttctgaggga ctgctgtcaa tcaccatgga
     7681 ataagcgccg tcagagttgg cggcgtcgga gaaatattta tcgccggcaa gaatctggcc
     7741 ggaagattcc agcatgtttt ccgtgaacgt gccctgcatc tggcggacgg cgtcgcctgt
     7801 gatggcgaac atggtgtccc gccaggcggg gtcggcggtt gaccaccagt ggcgcgctgg
     7861 ttcgccgtgc caccactgat cggaaacgcc cgccccaccc acgaacccca gcctgccatc
     7921 gatgacaatg agttcgcgat gcgtgcgatt gttggcccgc ggccagttat agaacctgac
     7981 cgggtgatac caggtcacgt gtccgcccgc aaggcgcagc gtgcggaaga aatcctttgg
     8041 cgtggaaagg ctgccgacgg catcgagcac caggttgact tccacgccgg cccgcgcacg
     8101 ttcggtgaga gcatccacga ttcgctgcgc gatctcgcct tgctgaaaga tgtaagcctc
     8161 ccaatccacg cttttctgtg ccgactgaac ggccctgatc tccgcctcgt agaagttgac
     8221 tccattcggg atttcttcaa tgtgcgtgtg cggctggagc tgcgccccac ttaacgcggc
     8281 aagctgctgc atgaattcag gagaatcgag ctgggcaggc aggtggccgc ggagcttgta
     8341 atcaggaacg gggccaaaca gggcgatagc tacccatgag acgatcgcga gcatgctgat
     8401 gaccgcaaac caacgcagcc agcggtagtg ctcgagcgcg cgcgctacct cgccttcttt
     8461 tcccttctgg tgccgtgccg ggatctcacg cggctgctta ggcaatgtgg ccatg
//
LOCUS       DASQYP010000361        13265 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_39724, whole genome shotgun sequence.
ACCESSION   DASQYP010000361 DASQYP010000000
VERSION     DASQYP010000361.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 13265)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13265)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13265
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_39724"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..845)
                     /locus_tag="VE783_11760"
     CDS             complement(<1..845)
                     /locus_tag="VE783_11760"
                     /inference="COORDINATES: protein motif:HMM:NF012376.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HYX54119.1"
                     /translation="MRTRLLGFISIVQSIIFLGHLFLYMTLVSFFGPGISTPALRMAL
                     AVLSVSFVVASLRGWYAHDPIARAVYVLAAVWLGISSYLLWASLLCWIAFGFSRLLHL
                     GWPPHTIAAVLYGLALLVSFYGVVNASWLRVVRVPVKLPNLPEVWRGRVAALVSDLHL
                     GHVRNGRFIRRVTSKLRELRPDMVLLAGDVYDGVAADFEKLAQPWAEFLDWARDASSF
                     EGVFYIQGNHEEFYSHAEYLPPIARAGVRVLNNEKVDLQGLQLAGVHYRDAINPESFR
                     EILRG"
     gene            complement(888..1682)
                     /locus_tag="VE783_11765"
     CDS             complement(888..1682)
                     /locus_tag="VE783_11765"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HYX54120.1"
                     /translation="MEIRLTGRTAIVSGSTAGIGWAIAAGLAESGAKVIVNGRTQPRV
                     DAAVAQIRKKHTGCLCDGFASDLGTREGAEALTRRIPEADILVNNLGIFEPKKFFDIP
                     DDDWDRFFRVNVLSGVRLARHYTQGMVKRGWGRVMFISSESALQVPAEMIHYGTTKTA
                     QLAVARGLAETVAGTGVTVNSVLPGPTRSEGVERFVEQVGKQTGKSFPEMEKEFFRTM
                     RPSSLLQRFATNEEVANMVVYLASEQASATTGAAVRVDGGVVRSIA"
     gene            1825..2733
                     /locus_tag="VE783_11770"
     CDS             1825..2733
                     /locus_tag="VE783_11770"
                     /inference="COORDINATES: protein motif:HMM:NF012318.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trypsin-like peptidase domain-containing
                     protein"
                     /protein_id="HYX54121.1"
                     /translation="MAERIWAALSKEIAETSAETGKTVVAVLGRRHPSSGVFFSRDAV
                     ITVNHALRRDEDIGVVIAPGKKISASVAGRDPSTDMAVLRLAEPVEAPLVRWASGQAR
                     VGEFVLGLGRSWRGNIVASSGILSGVITAPWKTWQRGELDQFIRPDLTFYPGFSGGPL
                     VASTGEIIGINTAGLHRQVITVPASTVRRVAEELLSKGRIERPWLGLAMQPVPLPESL
                     RSRLNLNASDGLLVAHVEPDGPADKAGVMLGDVLYELAGKSVPDTESVQELLRDTKPG
                     QAMEAKLVRGGGAAGAKITLGARPSR"
     gene            2747..3406
                     /locus_tag="VE783_11775"
     CDS             2747..3406
                     /locus_tag="VE783_11775"
                     /inference="COORDINATES: protein motif:HMM:NF012422.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HYX54122.1"
                     /translation="MHEKTHKLVTFAETPQPEILVVAASARRRGILVDLIRRSSRYRQ
                     AHVTSASLTQLSSAQITVAELETQASADCFLRHAENAPNFAGFVALIDGPPATWLRRE
                     IHAGVNAILGCDVNSDELEFAIEVAEQGLVLLPTEFAQTLATVAAHTLEFSDLVEHLT
                     VREREVLELMGSGLSNKEIATRLGISEHTAKFHTSSVLGKLGAGSRTEAVSRGIRGGL
                     I"
     gene            3701..6274
                     /locus_tag="VE783_11780"
     CDS             3701..6274
                     /locus_tag="VE783_11780"
                     /inference="COORDINATES: protein motif:HMM:NF024583.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HYX54123.1"
                     /translation="MTCLLPLAAWTLTSFSSPLFHPSVGAFFVAAACLSAAIGGLPMA
                     LAAIALNAAALNLFVRLYHPAGVSQGTAGLWTLLLVVVAFMIGYAREKWSAAESLAGR
                     LRSDLARLRDELESQRSDLKRFHELSVRLSSSLELHRLLNDVLSSIATLQKTDLALML
                     VLPERGSKTLRVQAFTGFAPEQIKQFDEFPASFFSPEQRVLIEDIKKETQFPFTGVAE
                     SIGFKALFSMPISNVRNEPLGVVVTFFRKPHSPSERQSRLVELYARQAANALDNAKLY
                     RNSLDTLAAEQARAAVLRALAEASVQINSALTLDSLMQVITDQARSIIGARQAFTTLL
                     ARGGWHQSLTSISTADGQPSSIFPPQTSEMFALACNLNKPMRLSPRGKNGGPWRPMMK
                     PEEAQRGWLAAPLLTRDGRNLGLIQLADKMTGEFSSDDEAILVQLTHMASVAIENVRL
                     YREAQEQIAETRRAQEALERSKESMELAQKYVGIGIWEWDLQTGALVWSDELRRLHGF
                     APESFDGRYESWMESIHSEDRQQVHQAITDAMARSGEYEVQYRVVFPDRSLHWLEARG
                     RTILISETPVRMLGVAMDVTARKASDEALRHSEKLAATGHLAASIAHEINNPLAAVTN
                     ALYILRTHTQTPRNLLDFIRTAEMELSRVVHITRQTLGFYRQISTPVTVDVHSLLDET
                     MGAFESRMEKHKIVLHRRYSAIEALSGYPAELRQVFSNLLLNALEAAPEGGNVSLRTR
                     QVHDREGRLGVRVTIADDGAGIAPENMPHIFEPFFSTKATKGTGLGLWVSQGLVQKHG
                     GTIRLRSSTAANHHGTCFAVFLPFPQAEQPFTVGDLAANTETPPLRREAAASGNDLSA
                     A"
     gene            6529..7071
                     /locus_tag="VE783_11785"
     CDS             6529..7071
                     /locus_tag="VE783_11785"
                     /inference="COORDINATES: protein motif:HMM:TIGR02532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin-type N-terminal cleavage/methylation
                     domain-containing protein"
                     /protein_id="HYX54124.1"
                     /translation="MSPVRINSRSGRTFTGFSLVELMVVVMVILVIAAIAIPSFVQAR
                     MKANEASAVSSLNVIRTAEMMYSSAYPEEGFAPTLAVLGSGGGSGTASNNCQHPTKDA
                     ACLIVDDELASGIKNGYSFDIKTNGIHPANDFTATAVPQASGLSGRCSFALGASADVG
                     IVTPDGSLGHFQMSNGGCGP"
     gene            complement(7098..7634)
                     /locus_tag="VE783_11790"
     CDS             complement(7098..7634)
                     /locus_tag="VE783_11790"
                     /inference="COORDINATES: protein motif:HMM:NF022588.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2911 domain-containing protein"
                     /protein_id="HYX54125.1"
                     /translation="MGKAWMRMLAVAVALMALTLQAQQQDKTKRPSPSGTAEVTLKGK
                     SVKIDYSRPSMKGRKIFGGVVPYGKVWRTGANEATALTTAVDLNIGGAKVPAGSYTLY
                     SLPTESGWKLIINKQTGQWGTEYDEKQDLARVDLKTSKLDKTVEQFTISFEKSGEDSA
                     NLILEWENMRGSVVVKAQ"
     gene            7895..9493
                     /locus_tag="VE783_11795"
     CDS             7895..9493
                     /locus_tag="VE783_11795"
                     /inference="COORDINATES: protein motif:HMM:NF012894.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OmpA family protein"
                     /protein_id="HYX54126.1"
                     /translation="MRKTLALFGSMFFGLCLVAQNPSAAPAQSSNVQRTTKAINYRLR
                     NDAVKVDFHGTELMNNATGEARVTGKKSNVEIDARFENLDDPTKFGLEYLSLVLWAVS
                     PEGRAVNLGELVFDHNSAKLKAITDMQTFGMIVTAEPYFAVNQPGNMVVIENVIPLGT
                     REQNIDAKYELLGRGTYSSTNTHIQDAIFGIDRKTPRSLFEARNAVRIARVAAADKYA
                     ASIISRADQQLRDAEEAYVRKRDKATVETLAREAVGTAEEARVMAVKQKAEEEAQAKA
                     AADKKAAEEREARARADAESEARRRAEAETARVQAEQARQQAEAAKAEAMRMKQEAEK
                     ARQEAEAAKAQAVAQQQALAVEADKARKAADEADRLRQQAEKEKVDLRAQLLQQLNAV
                     LATRDSARGLIANMSDVLFKTGSFELLSGARERLAKVSGIVLAHPGLHLEVEGHTDSV
                     GGDEYNQQLSEKRADAVRTYLVQQGIPDSSIVARGLGKTTPVASNDTPEGRQQNRRVE
                     LVLSGEAIGTTNSARAMPAAAPQQ"
     gene            complement(9579..10226)
                     /locus_tag="VE783_11800"
     CDS             complement(9579..10226)
                     /locus_tag="VE783_11800"
                     /inference="COORDINATES: protein motif:HMM:TIGR03914.1"
                     /note="This protein belongs to the uracil DNA glycosylase
                     superfamily, members of which act in excision repair of
                     DNA. However, it belongs more specifically to UdgX branch,
                     whose founding member was found to bind uracil in DNA
                     (where it does not belong), without cleaving it, appears
                     to promote DNA repair by a pathway involving RecA, rather
                     than base excision; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UdgX family uracil-DNA binding protein"
                     /protein_id="HYX54127.1"
                     /translation="MAKQVYPTANAFMPGKIKLDTLRVAASGCKGCDLYKRGTQTVFG
                     EGSRHARVLLVGEQPGDKEDLAGRPFVGPAGAVLDKALVQAGIGRNEVYVTNMVKHFK
                     WEPRGKRRIHKRPNALEISACRPWLEAEIAVTKPEVVVLMGATAAQGLLGRDFRVTQS
                     RGQWVRSELAAHVLATVHPSSILRAPDDKSRHDEMRRFVADLKVVAAQIRKLKAA"
     gene            10341..10754
                     /locus_tag="VE783_11805"
     CDS             10341..10754
                     /locus_tag="VE783_11805"
                     /inference="COORDINATES: protein motif:HMM:TIGR00149.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="secondary thiamine-phosphate synthase enzyme
                     YjbQ"
                     /protein_id="HYX54128.1"
                     /translation="MKFHIDYLTFNTKRHREYVHITPQVEEILQASGVQQGLVLVSAM
                     HITAGVYVNDNEEGLIHDIDRWLEQLAPFREDYLHHQTGEDNGDSHLKAILVHHQVIL
                     PLTNGKLLLGTWQRVFYAEFDGQRSKRVLVAVMGE"
     gene            complement(10763..12151)
                     /locus_tag="VE783_11810"
     CDS             complement(10763..12151)
                     /locus_tag="VE783_11810"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix domain-containing
                     protein"
                     /protein_id="HYX54129.1"
                     /translation="MAILLADDDVQLATFLSKSLESEGFTVHTALDEGSVIAELKRQN
                     YQLIILDLNLGRSDGVKLLEELRTHGIGTPVMVLSARDRVTDRVQSLNSGADDYVTKP
                     FSFQELAARVKAVLRRKADPALSVLRVEDLELDPAMRRVHRGSREIRLSPKEFELLFV
                     MMRRAGEVVGRQDLLRDCWGGEPDTDSNLVDVYVNYLRKKIDAAEEPKLIQTVRGTGY
                     RLGGPVSAQFAPLPGVQATHAMTVEIPPGMASPVEAIAGSASAPLAALVHSIAHDLAQ
                     PLTTVRCYLEIQNMPAGKAVLDRGDLVTIEQQADRAIALSKGISALVREAPVAPQSWV
                     DLDSLLNEAFAEFATLVHSKLLIVRREWEAAWKVSSNAAFRQLLVFAVCKLVGRNTRP
                     LVITFSPEERDGRTEICIRWAAGDEPAPMPDATSIFAKDLPAMRSLLEHIGASVTIAQ
                     GGCELSLSLPSE"
     gene            12437..>13265
                     /locus_tag="VE783_11815"
     CDS             12437..>13265
                     /locus_tag="VE783_11815"
                     /inference="COORDINATES: protein motif:HMM:NF012398.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HYX54130.1"
                     /translation="MAAKIYKNFIGGEWVESRNGQTYENLNPADTRDVIGVFQRSDSR
                     DVDDAVTAAQTAFQRWRLVPAPKRAEIIFRAAQILSERKEEYARQMTREMGKVLKETR
                     GDVQEAIDTAYYMAGEGRRLFGVTVPSELPNKFAMATRVPLGVCGMIAPWNFPMAIPS
                     WKLLPALVCGNTCVIKPAEDTPLSTFNLVKALTDAGLPKGVVNIVTGFGPDAGAPIVD
                     HPGVSAISFTGSSEVGRMVGEAAARSFKPCSLELGGKNAIIVLDDANLDLAIDGVLWG
                     "
BASE COUNT         2899 a         3885 c         3799 g         2682 t
ORIGIN      
        1 aagccacgca gtatctcccg aaagctttca gggttaatgg cgtcgcgata gtgcacgccg
       61 gcaagctgta gtccctgtaa gtcgactttt tcgttgttca gcacccgcac ccctgcccgc
      121 gcgatcggcg gcaggtactc ggcgtggctg taaaactctt catgattgcc ctggatatag
      181 aaaacgcctt cgaaggacga tgcgtcacgg gcccagtcga ggaactcggc ccagggctgg
      241 gcgagttttt cgaagtctgc ggccacgccg tcatagacat cgcctgccag cagcaccatg
      301 tcaggacgaa gctcgcgcag tttgctggtg acgcggcgaa tgaagcgacc gttgcgaacg
      361 tggcccagat gaagatcgct caccagagcg gcaacgcgtc cgcgccagac ttcgggaaga
      421 ttggggagct tcaccggcac gcgcaccacg cgcagccatg aggcgttcac cacaccataa
      481 aacgagacca gcagcgccag cccgtaaagc actgcggcaa ttgtgtgcgg cggccagccg
      541 agatgcaaca gccgcgagaa accgaacgca atccagcaaa gcagagatgc ccagagaaga
      601 taactggaga tgcccagcca gacagcggca agcacgtaca cggcacgcgc gatgggatcg
      661 tgtgcgtacc acccacgcag tgaggccaca acaaagctga cggaaagaac ggcgagcgcc
      721 atcctcagcg ccggcgtaga aatccccggg ccgaaaaagc tgaccagggt catgtacaag
      781 aacagatggc caaggaaaat gatggattga acaatactga taaagcccag cagacgagtg
      841 cgcactcctc gataaatcct ttattccgat gaaagtatga tgctttacta agcgatcgag
      901 cgtaccacgc cgccatcaac ccgcaccgcg gctccggtgg tagcggaagc ctgttctgaa
      961 gccagataca caaccatgtt tgccacttct tcattcgtgg cgaagcgctg cagcagcgag
     1021 ctgggccgca tagtgcggaa aaattccttt tccatctcag gaaagctctt gcccgtctgt
     1081 ttccccacct gctccacaaa tcgctctaca ccttctgatc gtgtgggacc gggcaaaact
     1141 gaattcacgg tcactccggt gccagccacc gtctctgcca agccgcgcgc cactgccagc
     1201 tgagcggtct tggtggttcc gtaatggatc atctccgcgg gaacctggag cgcggattcg
     1261 ctggagatga acatcacccg tccccagcca cgcttcacca tgccttgcgt gtaatgacgc
     1321 gccaggcgca cgccgctaag cacgttgacg cgaaaaaaac ggtcccaatc gtcgtctgga
     1381 atatcaaaaa actttttcgg ctcgaagatc ccgagattgt tgaccagaat gtcagcttcg
     1441 ggaatcctgc gcgtcagcgc ttccgctcct tcacgtgttc ccagatcgct ggcgaatcca
     1501 tcacacaggc agcccgtatg cttctttctg atctgcgcga ctgcggcgtc cacgcgcggc
     1561 tgcgttcggc cgttcacaat gacctttgcg cctgattccg ccagcccggc ggcgatggcc
     1621 cagccaatac ccgctgtgga acctgaaact atggccgtcc tcccggtaag acgaatctcc
     1681 atggtgtccc tttcttttca gcaggaaaga gtagagatgc cggtgccgtc cggcaggatt
     1741 cattaactgc ctgcccgaat ggcggatgcg ccgccttcct ggaagcggca tattcaggac
     1801 tgaaatcaaa cctggagtac caaaatggca gagagaatct gggcagcatt atccaaggaa
     1861 attgcagaga cgtcggctga aacaggtaag acggtagtcg cggtgctggg acggcggcac
     1921 ccttcgagtg gagtattttt cagccgcgat gcggtaatca cggtaaatca tgctttgcgt
     1981 cgcgatgaag acatcggtgt ggtaattgca ccggggaaaa aaatatcggc gagcgtggcg
     2041 ggccgcgatc ccagcactga tatggcagtg cttcgtctcg ccgagcctgt agaggcgccg
     2101 cttgtgcgct gggccagcgg acaggctcgc gtgggcgagt tcgttctggg actcgggcga
     2161 tcatggcgcg gtaacatcgt ggcgagttca ggaatacttt ccggcgtaat taccgcgccg
     2221 tggaagacgt ggcagcgcgg tgagcttgat cagttcattc gtcctgacct cactttttat
     2281 cccggattct cgggtggtcc actcgtcgcg tcgacgggag agatcatcgg aatcaacacc
     2341 gccgggctgc atcgtcaggt cattactgtt ccggcttcga ctgtgcggcg cgtggctgag
     2401 gagctcttat cgaagggcag gatcgaacgt ccctggcttg gcctggcgat gcagccggtg
     2461 ccgctgccgg aatcgttgcg ttcgcggctg aatctaaatg cgagcgacgg attgctggtg
     2521 gcacacgtgg agcctgacgg accagccgac aaagccgggg tcatgctagg cgacgtgctg
     2581 tacgaactcg cgggcaaatc tgtgcccgat acggagtcgg tgcaggaact actgcgtgac
     2641 accaaacccg gccaggccat ggaagcgaaa ctggttcgcg ggggaggcgc agccggcgca
     2701 aaaataacac tgggggcgag gccatcaaga tagagccagc atcaacgtgc acgaaaagac
     2761 ccacaaactg gtgacgttcg cagaaacgcc gcaacccgag attctggtgg tagcggcttc
     2821 tgcgcgacgc cgtggaattc tggttgacct cattcggcgt tcttcgcgat atcggcaagc
     2881 acatgtaaca tctgcttcac tcacgcagct gagttccgcg caaattaccg tagccgaact
     2941 tgagacacag gcgtcagccg attgctttct tcgccatgcg gagaatgccc caaactttgc
     3001 gggctttgtg gctctgatcg atggccctcc ggcaacatgg ctgcggcgtg agatccatgc
     3061 cggcgtgaat gcaatcctgg gctgtgacgt caacagcgac gaacttgaat tcgcaattga
     3121 ggtggcagaa cagggactgg tgctgctgcc gaccgaattt gcccagacgc ttgccacagt
     3181 cgctgcacac accttagaat tttctgatct tgtggagcac ctcactgtgc gtgagcgtga
     3241 agttctcgag ttgatgggca gtggcttgtc aaataaggag atcgcgacac ggctgggtat
     3301 ttcagaacac acagccaagt tccataccag ttctgttctg ggaaagctgg gggccggcag
     3361 ccgcacggag gcggtgagtc gggggatccg gggcggtctc atctaagcgc cgaagtacat
     3421 atcaggcatg ccattcactg ctgatctcat gtaccttgtg ccactccgga attaggtgat
     3481 ctcttaatcc tgagtagagc ggaaacccgc atcaactctg aatatggaca tcttaattcc
     3541 tgtactctcg aactaggccc aaaggcctgt cggaagccgc gtaaaaccat gctatgctgc
     3601 gctcaacctg caacccgtcg agtgtagtct cacccacgag aggagaccga aagttttgcc
     3661 cccctccccc tttaaacgta tccgtgtagc tgcctgggta gtgacctgct tactaccttt
     3721 agccgcatgg acgctgacca gcttcagctc accgctgttc catcccagtg tgggtgcgtt
     3781 ctttgttgcg gccgcctgcc tctcagccgc gatcggcggc ctgccgatgg ccttggctgc
     3841 catcgctctc aatgctgcag ccttgaacct tttcgtccgc ttgtaccacc cggccggcgt
     3901 gagccaggga acggcgggac tctggacgct cctgctggtg gtggtggcgt tcatgatcgg
     3961 ttacgcccgc gagaaatggt ccgcagcaga gtctctagct gggcgcctgc gctccgattt
     4021 agcccgcctg cgcgatgaac tcgaatcgca acgctctgat ctaaaacggt tccacgaact
     4081 cagcgtaagg ctttccagca gcctcgagct gcaccgcctg ctcaatgatg ttctctcgtc
     4141 tatcgcgacg ctccagaaga ctgatcttgc gctcatgctg gtcctgcctg agcgcggcag
     4201 caagacattg cgggtgcagg cattcaccgg attcgctccg gaacagatca agcaatttga
     4261 cgaattcccg gcttcgttct tctctccgga acaacgggtg ctgatcgaag acataaagaa
     4321 ggaaacgcag ttccccttca ccggcgttgc cgagagcatc ggattcaagg cgctgttcag
     4381 catgcccata tcgaacgttc ggaacgaacc gctgggcgtg gtggtcacat tcttccgcaa
     4441 accgcattct cccagcgagc ggcaatcgcg gttggtggag ctctacgcgc gccaggcggc
     4501 caacgcgctc gataatgcga agctctatcg caattctctg gacaccctgg ctgcggagca
     4561 ggcgcgtgcc gcggtcttgc gtgccctggc ggaagcctcg gttcaaatca attccgcgct
     4621 cacgctcgat tcactgatgc aggtgatcac cgatcaggca aggtcgatca ttggagcgcg
     4681 tcaggcattc acaaccctcc tggcgcgtgg cggctggcac cagagcctca cctccatttc
     4741 caccgctgat ggtcaaccct cctcaatttt tccgccgcaa acctctgaga tgttcgcgct
     4801 ggcttgcaat ctcaacaagc ccatgcgcct cagccctcga ggcaagaacg gcggcccgtg
     4861 gcgacccatg atgaagcccg aagaagcgca acgcggctgg ctggctgctc cgcttcttac
     4921 tcgcgacggg cgcaaccttg gactgatcca gcttgccgac aaaatgacgg gggaattttc
     4981 ctcggatgac gaagccatcc tggtccagct cacgcatatg gcgtcagtgg ccattgagaa
     5041 cgtcaggctt taccgtgaag cgcaggaaca gatcgctgaa accaggcgcg cgcaggaagc
     5101 cctggagcgc agcaaggaga gcatggaact cgcgcagaaa tatgtcggca tcggcatctg
     5161 ggaatgggac ctgcaaaccg gagcgctggt ctggtcagac gagctgcgcc gcctgcatgg
     5221 gtttgctccg gaaagttttg acggccgtta cgagagctgg atggagagca ttcactcgga
     5281 ggatcgccag caggtgcacc aggcgattac ggatgccatg gcgcgcagcg gcgagtacga
     5341 agtccaatac cgtgtggtgt tccccgaccg cagtcttcac tggctggagg cgcgcggccg
     5401 cacgatcctg atttcggaaa ctcccgtacg catgctcggc gttgccatgg atgtgacggc
     5461 gcgcaaggca tccgacgagg cgttgcgcca ttccgaaaaa cttgctgcca cagggcacct
     5521 ggccgcgagc attgcacatg aaatcaacaa tcctctggcg gccgtcacca acgcgctcta
     5581 catcctgcgg acccacacgc agacgccacg caacctgctg gatttcatcc gcaccgcaga
     5641 gatggaactg tcgcgggtgg tgcacatcac gcggcagacg cttggcttct atcgccagat
     5701 ttcaactcca gtcaccgtgg acgtgcactc gctgctcgat gaaaccatgg gcgcgtttga
     5761 gtcgcggatg gagaagcaca aaattgtgct tcacaggcgt tattctgcca ttgaggcact
     5821 ttccggctat ccggccgagt tacgacaggt attttccaac ttgctcctca atgcgcttga
     5881 ggccgcgccg gaaggcggaa acgtgagcct ccgtacccgg caggtacatg atcgcgaagg
     5941 acggcttggg gtgagagtca ccatcgcaga cgacggcgcc gggattgcac cggaaaacat
     6001 gcctcacatt ttcgagcctt tcttcagcac caaagccact aagggtaccg gacttggact
     6061 ctgggtgagc caggggctgg tacagaagca cgggggcaca atccggctgc gttccagcac
     6121 tgcggcaaat catcacggta cgtgttttgc cgtgtttctg ccgttcccgc aggcagaaca
     6181 accgtttacg gtgggggatc ttgcggcaaa caccgaaaca ccaccgcttc ggcgggaagc
     6241 ggccgcctca ggcaatgacc tttccgcagc ttgattgctg tgcaagcagc tgaaaataca
     6301 gcagtaatac ctcgctaggc gatatagcta ctgcaagtgc cagtcctgaa cgatctttgg
     6361 tcagggcttt tgccgatgtt cacgtttact caagtgggct aaaaacacgc atatctactg
     6421 aggaatcgca ttccgcacca gcccggattg agtgcagtta gagaaaatta attaagtgaa
     6481 acgcagtagt cttgcggtat agtttgagaa ccgccttact ttagtcgcat gtcccccgta
     6541 aggataaatt cgcggtctgg ccggaccttt acaggcttct cgctcgttga gctgatggta
     6601 gtggtgatgg tgatccttgt catcgcggcc attgccatcc cgagcttcgt ccaggcccgc
     6661 atgaaggcga atgaagcctc tgcagtctcg tcactgaacg taatccgcac cgcggaaatg
     6721 atgtactcaa gcgcctatcc ggaagaaggc ttcgcgccaa cgctggcggt acttgggtcg
     6781 ggcggcggat ccggaactgc gtccaacaat tgccagcacc ctaccaaaga cgcagcgtgc
     6841 ctgatcgtgg atgacgagtt ggccagtgga ataaagaacg gctattcctt cgacatcaaa
     6901 accaacggca ttcaccccgc caatgatttc accgcgacgg ctgtgcccca ggccagcggc
     6961 ctttccggac ggtgctcttt tgcactcggg gcctcggcag acgtgggtat tgtaaccccg
     7021 gatggttctc tcgggcactt ccagatgtcg aacggcgggt gcgggccgta aataccacag
     7081 cccacaccaa ccaatctcta ctgcgctttc accactactg acccccgcat attttcccat
     7141 tcgagtatca ggttagcgga atcttctccg ctcttctcga atgaaatcgt gaactgctcc
     7201 accgtcttat ccagtttgct ggtcttcagg tccacgcgcg cgaggtcctg cttttcgtca
     7261 tactccgttc cccattggcc ggtctgcttg ttgatgatca gcttccagcc gctctctgtc
     7321 ggcagcgagt aaagcgtata gctgccagca ggcacctttg cgccaccaat gttcagatca
     7381 accgccgtgg tgagcgcggt agcttcattg gcgccggtgc gccagacttt tccgtaaggc
     7441 accacgccgc cgaagatctt gcgccctttc atggaaggac ggctgtaatc gatcttcact
     7501 gatttgccct tcaatgtgac ctcggcagtg cctgaagggc tgggacgttt agtcttgtcc
     7561 tgctgttgcg cctgaagcgt caatgccatc agagcgactg cgaccgccaa catgcgcatc
     7621 catgctttcc ccatcaagaa attctccttt gtgctgctgc ggtgacatta tcgagtaaag
     7681 gatggatggg ttcaaatccg caagccggtt tccagcgaga cgggactcta agtcagtaca
     7741 ctggtcactg cggtcaaaga ccaaaagcgc ggctggcaag cacgaaagta ctagcaaccc
     7801 cttgaaccaa ctgcgtcttt caaatactcc caatcccgac ataaagttag agccgaaact
     7861 ccaccactct ccaccatctg ttgaggcaaa tgccatgaga aaaacactgg cactgttcgg
     7921 atctatgttt tttgggctgt gtctcgtcgc tcagaaccct tctgctgcgc cggcacaatc
     7981 cagcaacgtt cagcgcacca ccaaggcaat caattaccgg ctgcgcaatg atgccgtaaa
     8041 agttgacttc cacggcaccg aactcatgaa caatgccacc ggcgaagccc gcgtcactgg
     8101 caaaaagagc aacgtggaaa tcgacgcgcg gttcgagaac ctggacgatc ccacgaaatt
     8161 cggcctcgaa tacctgagcc tggtgctgtg ggccgtctcg ccggaaggtc gcgcggtaaa
     8221 cctgggcgaa ttggtgttcg atcacaatag cgccaagctg aaggcaatca ccgatatgca
     8281 gacgtttggc atgatcgtta cggccgaacc gtactttgcc gtaaaccagc cgggcaacat
     8341 ggtcgtgatc gagaacgtga tcccgctggg aacgcgcgag caaaatatcg acgcaaagta
     8401 cgaacttctg ggacgcggaa catactcttc gacgaacact catatccagg acgctatttt
     8461 cggtattgat cgcaagacgc cgcgttcgct gtttgaagcg cggaacgccg tgcgcattgc
     8521 ccgggtcgct gctgctgata aatacgcggc cagcatcatc tccagggctg atcagcaact
     8581 gcgcgatgcc gaggaagcat acgtacgcaa gcgcgacaag gcgacggtag agactcttgc
     8641 gcgcgaagca gtagggacgg ctgaagaagc gcgtgtgatg gcggtaaagc agaaggcgga
     8701 agaagaggcg caggccaaag ccgccgccga taagaaagca gccgaggaac gtgaagccag
     8761 ggcccgcgcg gacgcggaat ccgaagcacg gcgtcgcgct gaagcagaga cagcccgggt
     8821 tcaggccgaa caggcccgcc agcaggcgga agctgccaag gctgaggcga tgcgcatgaa
     8881 acaggaagca gaaaaagcgc gccaggaagc tgaagccgcg aaggcccagg cagtggcaca
     8941 acagcaggcg ctggcggttg aggccgataa agcccgcaaa gcggctgatg aggcggaccg
     9001 tctgcggcag caagccgaga aagagaaagt tgacctgcgc gcgcagttgt tgcagcaact
     9061 caacgccgta ctggccacgc gcgatagcgc tcgcggcctg atcgccaaca tgtcagacgt
     9121 gctgttcaag accggcagct ttgagttgct ctctggcgcg cgtgagcgcc tggccaaggt
     9181 ttctggcatt gtattggcgc atccgggact gcacctggaa gtggaaggcc acacagacag
     9241 cgtgggaggc gacgaataca accagcagct ctctgaaaag cgcgctgacg cggtgcgcac
     9301 ttacctggtc cagcagggca tccctgatag ctcaatcgtt gcgcggggtt taggtaagac
     9361 cacccccgtt gcgagcaatg acaccccgga aggacgtcag cagaaccgtc gcgtggaatt
     9421 ggtgctctcc ggtgaagcga ttggaaccac gaactctgcg cgcgctatgc ctgcggctgc
     9481 gccacagcag tagcgcttcg ttgcaaaaaa caaaaggagc ctcaaaccaa ggctcctttt
     9541 ttttcaatat cccggcaagc cgcggccagc tgaatcgttc acgctgcctt aagctttcgg
     9601 atttgcgcgg ctaccacctt caggtcagca acaaagcgcc gcatctcgtc atggcggctt
     9661 ttatcatcgg gtgcgcgcag gatggacgaa ggatgcactg tggccagtac gtgtgcggcg
     9721 agttcagatc gcacccattg tccgcggctc tgcgttacgc gaaaatcgcg gcctagcagc
     9781 ccctgagcag cggtggctcc catcagcacc acaacctccg gtttagtcac ggcaatctcg
     9841 gcctccagcc agggacggca cgcgctgatc tcaagcgcat tgggcctttt atgaatccgg
     9901 cgtttgccac gtggctccca cttgaagtgc ttgaccatgt tggtcacgta tacctcattg
     9961 cggccaatgc ctgcctgaac cagcgccttg tccagcaccg cgcctgcagg cccaacgaat
    10021 ggcctgccgg caaggtcttc tttgtcaccg ggctgctcgc ccaccagcag cacgcgggcg
    10081 tgtctcgatc cttcgccgaa gaccgtctgg gttccgcgtt tgtagagatc gcatcctttg
    10141 cagccgcttg ccgcaacgcg tagcgtatcc agcttaattt tcccgggcat gaaggcattc
    10201 gccgtggggt agacctgttt ggccataact tattggatgc gcggacgccc gccatcgtgt
    10261 gcgtcctgaa gcaaagagca ttcaaccagc agcactcaag ccaacactcg ttcgttacac
    10321 tttactgctg agagcacgcc atgaaattcc acatcgatta tctgactttc aatacgaaga
    10381 gacatcgcga gtatgtgcac atcacgccgc aagtggagga gatccttcag gccagcggcg
    10441 tccaacaggg actggtgctg gtctcagcca tgcacattac tgccggcgtt tatgtgaatg
    10501 acaatgaaga agggctgatc catgacattg atagatggct ggagcagctt gcgcctttcc
    10561 gcgaagacta tctgcatcac caaaccggag aagacaatgg agactcccac ctgaaggcca
    10621 tcctggtaca tcaccaggta atcctgccgc tcaccaatgg caagctcctg cttggaacgt
    10681 ggcagcgcgt cttctacgcg gagtttgacg gccagagatc aaaacgtgtg ctggtggcag
    10741 tcatgggcga gtagatgaat gattattcgc tcggcaatga cagggacaac tcgcaaccgc
    10801 cttgagcaat agtgacactt gccccgatgt gctccagcag agagcgcatg gcaggcaggt
    10861 cttttgcaaa gatgctggtg gcgtcaggca tgggtgccgg ctcgtctcca gccgcccagc
    10921 gaatgcagat ctctgtccgg ccatctcgtt cttccggcga gaaggtaatc accagcggcc
    10981 gagtgttgcg gcctaccagt ttgcaaaccg caaataccag aagctgacgg aaggcggcgt
    11041 tgctgctcac cttccatgct gcttcccatt cgcgtcgcac aatgagcagc ttgctgtgga
    11101 ccagtgttgc gaactcggcg aaggcttcgt tgagcaacga atcgaggtcc acccaggact
    11161 gtggcgctac cggagcttca cggacgagtg ccgagatccc tttggagaga gcaatcgccc
    11221 ggtctgcctg ttgttcaata gtgaccagat cgccgcgatc cagaaccgct ttgccggctg
    11281 gcatattttg tatttccaga tagcaccgaa ccgtagttaa cggctgagcc aggtcatgag
    11341 caatggaatg gacaagcgcg gcaagcgggg cgcttgctga tccagcaatc gcttcaactg
    11401 gcgacgccat ccccggaggg atttccaccg tcatcgcgtg cgtagcctgg actccgggca
    11461 agggcgcgaa ttgggcgctg actggccctc ccagccggta tcccgtgcct cggacggttt
    11521 gaatcagttt cggttcttct gcggcgtcaa ttttcttgcg cagatagttc acgtacacgt
    11581 ccaccaggtt actgtccgtg tccggctcgc cgccccagca atcgcgcaga aggtcctgac
    11641 gaccgactac ctcaccggcg cgtctcatca tcacgaaaag cagctcaaat tctttagggc
    11701 tgagcctgat ctcgcggctt ccgcggtgca cacgtcgcat ggcaggatca agttccaggt
    11761 cttccacgcg caagacgctc agagcgggat cggccttgcg acgaagcacc gcctttacgc
    11821 gagcggcaag ctcctgaaaa gaaaaaggtt tggtgacgta atcatcggcg ccggagttca
    11881 gggattgcac acggtcggtc acccggtcgc gggcgctcaa taccattacc ggtgtgccga
    11941 ttccgtgagt gcgcagctct tccagcagct tcactccgtc actcctgccc aggttgagat
    12001 caagaatgat gagttggtag ttctgccgct tgagttcggc tatgacggac ccttcatcca
    12061 gggctgtgtg gacggtaaag ccttcagact caagtgattt ggaaagaaac gtcgccagtt
    12121 gaacatcatc gtccgcgagc agaatagcca tgtactgcaa ccttccttga acagaaatga
    12181 ctaacgctcc gcgcccggac acggagagtt caagggggtg aaaaattctg acttcaagat
    12241 tgttcctgat tttaactgac aagattaaaa aatcaggaat tttttccgtt tttgtaagat
    12301 gcggcagttc caaaacgggc atacctgctc tgagtagccg ggcgcgtcct tcggtgccgg
    12361 cccgccttgg ccagcggaca atccgtcttg gtaacatgga taattgattc cctgaaagcg
    12421 agcattcaag agcctgatgg cggcaaaaat ctacaagaat ttcattggcg gcgagtgggt
    12481 tgagtcccgc aacggacaga cctacgaaaa cctgaacccg gcagatacgc gtgacgtaat
    12541 cggcgtattc cagcgctccg acagccgcga cgtggatgac gccgtgaccg ccgctcaaac
    12601 ggcctttcag cgctggcggt tggttccggc gcccaaacgg gctgaaatta tcttccgggc
    12661 cgcccagatt ctcagcgagc gcaaggaaga gtacgcccgc cagatgaccc gggagatggg
    12721 caaggtgctg aaagagacgc gcggcgacgt gcaggaagcc attgacactg cctattacat
    12781 ggccggcgaa ggccggcggc tgttcggcgt aaccgtccct tctgagctgc ccaacaagtt
    12841 tgccatggcc acgcgcgtcc cgcttggtgt ttgcggcatg atcgcgccgt ggaacttccc
    12901 catggctatc ccaagctgga agctgctgcc ggcgctcgtc tgcggcaata cctgcgtgat
    12961 caagccagct gaggatacac cgctttccac gttcaacctg gtcaaggccc ttactgacgc
    13021 cggtctgcct aaaggcgtgg tgaacattgt cactggattc ggtcctgatg caggcgcgcc
    13081 cattgttgat cacccgggcg taagtgcaat ctccttcacc ggctcaagcg aagttggccg
    13141 catggtaggc gaggcggccg cccggtcttt caagccgtgc tcactggaat tgggcggtaa
    13201 gaacgccatc atcgtgcttg acgatgccaa ccttgacctt gccattgacg gagtgctctg
    13261 gggcg
//
LOCUS       DASQYP010000362        22027 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_98286, whole genome shotgun sequence.
ACCESSION   DASQYP010000362 DASQYP010000000
VERSION     DASQYP010000362.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 22027)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 22027)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..22027
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_98286"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..933)
                     /locus_tag="VE783_11820"
     CDS             complement(<1..933)
                     /locus_tag="VE783_11820"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX54131.1"
                     /translation="MAPDNDADSADIPPLARGRISQPEYLQLRERHIQTLRGVDDLAR
                     NPKMRSSAIRGMELQEQFYRNFMLPFGATAGPVGFAVPTWTELGPSPLPNGQTDPNLN
                     PANEVPVSGRVTAIAIDPTDANIVYVGAAQGGLYRTLDGGTTWTPLMDAAQSLAIGAI
                     TIDPLNRNTVFIGTGEGNFSADCFFGVGVYVIQNATTTANLSGPFHLSTDATPIDLFT
                     GRSITKILVNPANDNQVMVSTASGFSGLSADVFSVLPTRGVYVSQNALSPTPTFTRLT
                     IQTPTTNQSVTDIEMDPADPTRVVVNVFGSPGVAE"
     gene            1336..2436
                     /gene="queA"
                     /locus_tag="VE783_11825"
     CDS             1336..2436
                     /gene="queA"
                     /locus_tag="VE783_11825"
                     /EC_number="2.4.99.17"
                     /inference="COORDINATES: protein motif:HMM:TIGR00113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_function: GO:0016853 - isomerase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA preQ1(34) S-adenosylmethionine
                     ribosyltransferase-isomerase QueA"
                     /protein_id="HYX54132.1"
                     /translation="MLVSDFNFHLPEELIAQQPLAERSASRMLQLDRSSGAFQDLWFR
                     DFPEQLQPGDLLVLNNSRVFPARLFGHRSGVQSQPLSSRNPAAKEFLKGRVEVLLTRQ
                     IAPLEWQALVRPGRKIGVGERISFGAEGGPAELSAEITARGEFGERTLRFDPVPDFFA
                     AVEKLGNVPLPPYISRTDTREDRERYQTIYANPAERGSVAAPTAGLHFTPEIMERVKE
                     RGVEVAEITLHVGLGTFQPLHVDKVEEHRMHTEHYSISDQAADQINRALNEGRRVIAV
                     GTTTVRTLEFVARANNGRIIVGSGEADAFIYPGFQFRVIRGLLTNFHLPQSTLLMLVS
                     AFAGRENVLRAYEHAVADKYRFFSYGDCMFIV"
     gene            2523..3593
                     /gene="ada"
                     /locus_tag="VE783_11830"
     CDS             2523..3593
                     /gene="ada"
                     /locus_tag="VE783_11830"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF011964.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional DNA-binding transcriptional
                     regulator/O6-methylguanine-DNA methyltransferase Ada"
                     /protein_id="HYX54133.1"
                     /translation="METIATMMRTSKGEDLWAQVMARDSRSDGRFVYAVKSTGIFCRP
                     TCPSRRPRRGNVEFFSSTGEAKSAGYRACLRCQPEQPNAQLGKIEAACRFIDRHLEDT
                     LHLPAMAAHVGLSPFHFQRLFKRTLGISPRQYQQGQRARKYKQALQTEPRITDAVYEA
                     GYSSTSRAYENGNSSLGMTPTSFRRGGEGVLINYTIIPSELGCILVATTARGVCAVRF
                     GAKASELESELRQEFSAATLRRNDHALQPATEAIRSLLSGSPSLGRVPLDIQGTAFQQ
                     RVWQAIRQIPAGQTRSYSELAKQVGAPRAVRAVASACARNPVALVVPCHRVVQKSGKL
                     AGYRWGLERKAALLRAESSGQR"
     gene            3606..3791
                     /locus_tag="VE783_11835"
     CDS             3606..3791
                     /locus_tag="VE783_11835"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX54134.1"
                     /translation="MNAKQEVRTLLEKLPDDCSLEDIQYHLYVLEKIRLGLQDLNSGK
                     THTQEEVELRLKKWLAE"
     gene            4091..4924
                     /locus_tag="VE783_11840"
     CDS             4091..4924
                     /locus_tag="VE783_11840"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HYX54135.1"
                     /translation="MFIQLQGASIYVDDQGSGSPTLFLHGNPDSSILWRGIINRMKSD
                     LRCIAPDLPGFGHSGIPAGFKYSLPELGQFIDGLVTALNIREPLNLVMHDFGGPYGLA
                     WAVKHSEKVRRLAIMNTIFFSDYRWHSWARIWRTWPLGELSMATTTWPAFRMMMKKSA
                     PNLSDEHLRETYSLFTPRTRKMVLDLYRATDPANYKSWEDQLLELTARVPAMVLWGDR
                     DPYVSSGYAERFGAKQVLHYPEYGHWLPGENPDEVAGRLADFFLEARENAVASQRQTG
                     I"
     gene            4948..5421
                     /locus_tag="VE783_11845"
     CDS             4948..5421
                     /locus_tag="VE783_11845"
                     /inference="COORDINATES: protein motif:HMM:NF042760.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbonic anhydrase"
                     /protein_id="HYX54136.1"
                     /translation="MRKIFHFSSPRDRYKSDAAVVWCYDHRFSLVFSKLLKKLGVDNH
                     DPIRVAGGAKVLASPTNEADRDFVLEQILISRRLHDTNDVILMLHSDCGAYGGLTAFE
                     NDTVREAEHHRQEMHRAAEYLKQKMPDINVKAYFVDFDGVWEADLDGSAASERIA"
     gene            5543..5980
                     /locus_tag="VE783_11850"
     CDS             5543..5980
                     /locus_tag="VE783_11850"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX54137.1"
                     /translation="MGRSLVMTCFEERSLTEKLEACGGRTMGPVLHIPAVSDTSALPV
                     SAVSEWYAFTGEMPQVKLASFIRSTWFTLGPAAVARVQPENRWDLQRTVRLFWQELQR
                     LQPESYVARGQRLLIVTRNQTHFTTILRAFSGPLKNRAGDLTA"
     gene            6013..7101
                     /locus_tag="VE783_11855"
     CDS             6013..7101
                     /locus_tag="VE783_11855"
                     /inference="COORDINATES: protein motif:HMM:NF024918.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family protein"
                     /protein_id="HYX54138.1"
                     /translation="MANILYGVNGEGAGHSTRSKEVIYHLIEQGNTVHVASFDRGLAN
                     LSKSFDVTEIFGLRFAYVNNQVRYRRTAAKNLLAAPKAARSFARLLRLTDDWKIDLVI
                     TDFEPLTARIGHHRRIPIISIDNQHCLTHTNVKLPRQHRRDAAAAKITTRLMTPHAQA
                     YFVTSFFPARPTRKGTFLVPPILRREVLEVKPSSGNHVLVYVTSPSPELASMLRHVRC
                     EFVAYGFGREGRDGNIDYKMPSMEGFLADLASCKGIAANAGFSLVSEALHLGKPYLAI
                     PVKHQFEQIFNAYFLAQQGYGAFWEELSREKIESFLFNLPHYAEALAAYARQDNSALL
                     AKLDQTIREWAGRSTQRRSLLRRREASQ"
     gene            7098..7787
                     /locus_tag="VE783_11860"
     CDS             7098..7787
                     /locus_tag="VE783_11860"
                     /inference="COORDINATES: protein motif:HMM:NF013718.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatase PAP2 family protein"
                     /protein_id="HYX54139.1"
                     /translation="MSVEEPLPEPEQEPKPATLIEIATVAALAASIAALLLFAWLASE
                     MREGDTLKFDAAVRGWVHLFASPATTRVMSFISLLGDQVLIAELIIAVAVFLWLRWKR
                     GAAWLVLATLGGVILDTVLKHSFHRQRPVPFFGSALHSYSFPSGHALVSFCFYAVLAG
                     LIADRVRPLWLRVLVGLIAAALVISIGISRIYLGVHYPSDVIAGYLAAAMWVGTILAL
                     DRIRARRRRRA"
     gene            complement(7759..9384)
                     /locus_tag="VE783_11865"
     CDS             complement(7759..9384)
                     /locus_tag="VE783_11865"
                     /inference="COORDINATES: protein motif:HMM:NF013862.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006629 - lipid metabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="patatin-like phospholipase family protein"
                     /protein_id="HYX54140.1"
                     /translation="MPINPTQGRGAAAMAELEELRHEFREELAAEAVPRYASRIGVVL
                     SGGGARGAYEAGALMAFQDAEVPTHILTATSIGSINAASYAAHSDGLVGKAETLVNSW
                     MELTPATLGIDWSRYVFLLAGLVAASAGVGNFVWQWLQEHGIFLHAHHPKFTWISLAL
                     AGVAILLFADKLSYIGYVVLNFLRGLNWEPDRRKAWVSLGANVLVWGFIVLFLAFTHI
                     HLPWRTGRPLELSAPLPAVAVIAGAIGLYKLFQEPLSRVSHAFLRMPLRTGLFPNFDR
                     IRFLRARIPQERLRESQIRVIMTATDIQHGSGRFFSNVSVDELLKDPAVHSDFVRREI
                     EQPSDLVHAAVASSSYTFAYEAVPMDGRLWTDGGIMTNQPILPAMRLGADVIFLVLLS
                     PLEGEDNSGAIKTFLDVGVHAVDILISKNFKSDIALLNNFNRLCCAYASELGVEPEQV
                     ELEIGNQRYRYVESFHIAPEQPLKANALDFDGDIIGPIIVQGYRDARRTIHDFLQYER
                     SRPARESRRLVRLSAERPEGNFHAAKRADAAVP"
     gene            complement(9549..10289)
                     /locus_tag="VE783_11870"
     CDS             complement(9549..10289)
                     /locus_tag="VE783_11870"
                     /inference="COORDINATES: protein motif:HMM:NF016269.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid-binding SYLF domain-containing protein"
                     /protein_id="HYX54141.1"
                     /translation="MRKLFAIVLPAMAALVLGCSTHHETQTVSGKTVYGEQAQVVERL
                     RNAGDDLKQLMNIPENAIPQDVLKDAKCIAVVPDMVKGGFVFGAQHGRGVATCRTGNG
                     WSQPAFLAITGGSWGAQIGVESVDLVMVFLGDAGAKELLSSQFKLGGEAGLAAGPIGR
                     EAQASTDWKMKNKILVYSKTKGLFAGLDLSGASVKPDDDSTRTYYGKALSFDQILNGQ
                     GPANANSKLFLADVRQAFHESNANNPGM"
     gene            10606..10857
                     /locus_tag="VE783_11875"
     CDS             10606..10857
                     /locus_tag="VE783_11875"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX54142.1"
                     /translation="MNSRLLASLALALTLSPVLAQDNGGIKQDTKDAAHSTGDAAKKT
                     GHKVKKGTNKVVHKGAHATSKGANSVEDKTKPSPSPSPR"
     gene            10947..11366
                     /locus_tag="VE783_11880"
     CDS             10947..11366
                     /locus_tag="VE783_11880"
                     /inference="COORDINATES: protein motif:HMM:NF024803.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MerR family transcriptional regulator"
                     /protein_id="HYX54143.1"
                     /translation="MHKSVKNAARKPASGDVTIPDKLYFRIGEVSRLCGLPSYVLRFW
                     ETEFPQLKPPKSGTGQRTYRRADVENVLRIKKLLYDEGFTIPGARAQLKAEMRRKQSP
                     LPFVVPPSNVSELKQVRQGLCEILGILAHRRQAARQS"
     gene            11488..12726
                     /locus_tag="VE783_11885"
     CDS             11488..12726
                     /locus_tag="VE783_11885"
                     /inference="COORDINATES: protein motif:HMM:TIGR00225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S41 family peptidase"
                     /protein_id="HYX54144.1"
                     /translation="MSKKLQVLLLSSSMLVVVFALIGGLGVHASSSSSNADSSYTHMQ
                     VYSEVLHRIRTEYVEEPNMGAVTNGALHGLLESLDADSSYLSPAEYKAYQASKTDAKA
                     GVGAVVSKRFGYAAVVSVTPGGPADKAGINAGDIFETVNGKSTHDLSLAAIRTQLLGD
                     PGSRLEVVLIRARKVEPQKLTIVREVVNPPAVQAQMMPENVGYIKAQALTKGKAQDIA
                     TKIKELQSKGAKKLVLDLRNNADGDEDEGIAVANLFLNKGMISYLQGQKYPKATFSAD
                     PQKKITDLPLAVIVNRSTAGAAEIIASALLDNSRADVVGEKTFGEGSVQKVLDVPDGS
                     ALILSVAKYYTPKDKIIQDTGVTPNVLVAGGLEDVTAVTDDDSEVAPDEPQQSKPQQK
                     QDDDQLKKAIDVVNRKTQKS"
     gene            12944..15181
                     /locus_tag="VE783_11890"
     CDS             12944..15181
                     /locus_tag="VE783_11890"
                     /inference="COORDINATES: protein motif:HMM:TIGR02074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008658 - penicillin binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PBP1A family penicillin-binding protein"
                     /protein_id="HYX54145.1"
                     /translation="MKFLYSDLPDFHIAGKKLVGKVVFCLLVLGAALAGTLVGLLIVY
                     STDLPQISELQRYRPSTITELYDANGKVIGSFALQRRILAQYNDIPKVLRDAILSTED
                     KDFETHLGINFWRVLGATYRDLTSNSRAQGASTLTMQLSRNLFLSPERHFSRKVQEAM
                     LAIQIERHFTKEQIFTLYANQIFLGHGVYGFEAGAQYYFHKPAGELKLEEAALLAGLP
                     KAPVSYSPINFPERAIKRRNLVINNMLEDGKITAEDAVRAKGTPLHLHIEQDQSPAPY
                     FVEEVRRYLERKFGSEEVHEGGLRVYTSLDLDLQKAATSAVLDGLAAYERRHGWKGPL
                     KNVLDSGEKLDHFQSPDWSQPITPGSYVHGLVMDIGLQFAKIKLSTHSAYIGPGELAW
                     TGSKLPKKLLRVGDLVYVRVLSIAGDGTTRVTLEQDSGAQGALLAIDNASGDIKAMVG
                     GRDYTESKFNRALQAQRQTGSTFKPFVYAAAVEQGARPDDTIIDEPETFLSNGTPYTP
                     HNFDHRFEGKITLQRALADSRNIPAVKLAQQIGMNKVAEYARRFGITSPIPPYLPVAL
                     GAADLTLYEQTSAFSVFPDDGVRIEPRLVRKITDYDGHVMAEEGPEARDVITEQAART
                     MVSLLQGVVLHGTAAPARKLNHALAGKTGTTNDYTDAWFIGFSPSMTAGVWVGYDEKK
                     TLGDNETGGHAALPIWIDFMRTVTANPLIARESFPGTQINTAPRVALKRAAVVSLKRP
                     TAGVH"
     gene            15182..15943
                     /locus_tag="VE783_11895"
     CDS             15182..15943
                     /locus_tag="VE783_11895"
                     /inference="COORDINATES: protein motif:HMM:NF015734.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PASTA domain-containing protein"
                     /protein_id="HYX54146.1"
                     /translation="MVLKIARYLLRALVLLLVFLGAALLAMRVAIHDREIQVPKLVGL
                     SMAEAERVANSKGMVTSIASRFYSTEIPKGHVVAQMPKAESTVRHGSKILISESLGAQ
                     KAAIPNVVGQSENAARINLKSRGLQEGSVTSIRLAGAAPGTVIAQSPSPDSQEVNSPK
                     VNLVLAANDEAAQFVMPSFLGKPLAEAAAAADKAGMVVANAPKTQSSDAKTAPVLTGI
                     VVKQYPLPGQRVAAGEKIWFTVSKQSATTPAESNH"
     gene            complement(15977..17299)
                     /gene="rsmB"
                     /locus_tag="VE783_11900"
     CDS             complement(15977..17299)
                     /gene="rsmB"
                     /locus_tag="VE783_11900"
                     /EC_number="2.1.1.176"
                     /inference="COORDINATES: protein motif:HMM:NF011494.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0001510 - RNA methylation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (cytosine(967)-C(5))-methyltransferase
                     RsmB"
                     /protein_id="HYX54147.1"
                     /translation="MPASPARVAAFQILLRVERESAYATELLHSEMLEELSPPDRNLV
                     TEIVMGVLRWRSRLDEAIAYFSFSPMRKLDLEVLTALRMGVYQILLLTRVPPHAAVNE
                     TVELVKLSKKTSAAGLANAVMRKIQGAQRSGKHPWTKPGLAAEYAHPEWLVERWRKEY
                     DDETAALICKFDQTIPATTLRLANAQQHEQLTQEGIELEPAALLRSAAKVGSGDVTQS
                     ELFRSAQIAIQDEGSQLVATLVGSGKRILDCCAAPGGKTGALATRMPEAQIFAAELHP
                     HRARLLRRRAPQDNVQVITADATNLPYGAEFDRVLADVPCSGTGTLARNPEIKWRLRP
                     EDIHDLQARQIAIVRAAMRHVAPGGRLVYSTCSLEAEENRTVVEVALQSSADFSIIPV
                     KEELARLQNSAELVWKDPGSLTSGEFLRTLPGLHPCDGFFAAILERKT"
     gene            complement(17305..18237)
                     /gene="fmt"
                     /locus_tag="VE783_11905"
     CDS             complement(17305..18237)
                     /gene="fmt"
                     /locus_tag="VE783_11905"
                     /EC_number="2.1.2.9"
                     /inference="COORDINATES: protein motif:HMM:TIGR00460.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004479 - methionyl-tRNA formyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006431 - methionyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methionyl-tRNA formyltransferase"
                     /protein_id="HYX54148.1"
                     /translation="MKLVFCGTPQFAVPSLEALAAAGHDVQLVVTQPDRPQGRGMELT
                     APPVKETALRLHLPVAQPEKIKKNEEFQRRLEQIEPEAIIVVGYGRIIPPWMLTLPRF
                     GNINVHGSLLPKYRGAAPIQWAIANGETVTGVTTMHLDEGLDTGDILLKRELAIEPGD
                     TAVTLAPRLAELGASLLIETLTELQQGEADPVPQDDSLATLAPILKKEDGLVDFQRSA
                     REIHNRLRGFQPWPGAYTGFRGKNLKLITVRPGGEAHNVPPGELRVAGYELFLGCGEG
                     TVLQLLQLQPEGKKPMSARDFISGYRPTPGERLG"
     gene            complement(18242..18754)
                     /gene="def"
                     /locus_tag="VE783_11910"
     CDS             complement(18242..18754)
                     /gene="def"
                     /locus_tag="VE783_11910"
                     /EC_number="3.5.1.88"
                     /inference="COORDINATES: protein motif:HMM:NF001159.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042586 - peptide deformylase activity
                     [Evidence IEA];
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide deformylase"
                     /protein_id="HYX54149.1"
                     /translation="MVYPIVKYGDPVLEAPAETITEFNDELKKLAEDMFESMYAAHGV
                     GLAATQIGIGKRIAVIDVTFKEDPNAKLVLINPEIIKTEGSQKGEEGCLSLPDFRENV
                     TRPNKVTVRAQDLEGNWFETTGEELLARALVHETEHLQGKLYISHISRLKRDLMIRKI
                     KKLMRVGEWA"
     gene            complement(18763..19980)
                     /gene="aroC"
                     /locus_tag="VE783_11915"
     CDS             complement(18763..19980)
                     /gene="aroC"
                     /locus_tag="VE783_11915"
                     /EC_number="4.2.3.5"
                     /inference="COORDINATES: protein motif:HMM:TIGR00033.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004107 - chorismate synthase activity
                     [Evidence IEA];
                     GO_process: GO:0009073 - aromatic amino acid family
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate synthase"
                     /protein_id="HYX54150.1"
                     /translation="MVCRPGPFSDTMLRYFTAGESHGETLVAFLSGVPAGLEIDQQFI
                     DRELWRRQQGFGRGGRMKIEKDHAHIVSGVRHGKTIGSPIAILLANNDWKNWQESLPV
                     ETGDAEKHKPVASPRPGHADLAGALKYNFAEARYVLERASARESTSRVALGAIAKLFL
                     RHLGIEVLSHVIAVGHASLQNAEVLWSRLQELHAKDEVLLNCADPETEQRMKADVDQA
                     LRTGDSVGGVFEVVAHGVPPGFGTYAQWDERLDGLLAQAVMSLQAVKAVEIGTGVGSA
                     LAFGSTVHDEIGYERSTAQSAFTGFTRASNHAGGIEGGISNGEDILVRGYLKPISTLR
                     RPLGSIDFASREPVKAAYERSDVCVVPAAGVAAEAMVALTLAHCALEKFGGDSMLETL
                     RNFEGYKQQLQRF"
     gene            20059..20562
                     /locus_tag="VE783_11920"
     CDS             20059..20562
                     /locus_tag="VE783_11920"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF024812.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HYX54151.1"
                     /translation="MDIRLLTEADAEEWWHMRRLALASEPAAFAESVEEHERKSVEDA
                     RNFFRANSAENFVLGYFEGGRLAGTMGYYREKHDKFRHKGVVWGVFVHKESRGKGVAK
                     ALLTEIIRRVRQVPGIEQVLLVVAAGQAAPKRVYESVGFQHYGTEPRSLKVGDKYIDD
                     ELMILYL"
     regulatory      20602..20741
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF01055"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="molybdenum cofactor riboswitch; Derived by
                     automated computational analysis using gene prediction
                     method: cmsearch."
                     /bound_moiety="molybdenum cofactor"
                     /db_xref="RFAM:RF01055"
     gene            20803..21792
                     /gene="moaA"
                     /locus_tag="VE783_11925"
     CDS             20803..21792
                     /gene="moaA"
                     /locus_tag="VE783_11925"
                     /EC_number="4.1.99.22"
                     /inference="COORDINATES: protein motif:HMM:TIGR02666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0006777 - Mo-molybdopterin cofactor
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTP 3',8-cyclase MoaA"
                     /protein_id="HYX54152.1"
                     /translation="MRLQDKFGRYITDLRVSITDRCNYRCVYCRTGNQGAQYSELPFS
                     EYLRMVKLLVGLGIEKVRLTGGEPLLRNGVVDFVREVAKLRTLDGQPPDIAITTNGHL
                     LEDMAAPLKQAGLRRATVSMDAVDAEKFARITRVHNGYEAVLAGIRAAKRVALEPVKV
                     NCVLLRGFNEDQIIEFARFSREEGVVVRFIEFMPLEEDRVWSPDVVVGMDEILAKLNE
                     FRPVKQLPNAPSETARRYTFDDGKGEIGIIAPVSHPFCGHCSRIRITSDGKIRTCLFS
                     LLDHDLGSRMRAGATDGELTDYVRSVVSQKEARHHIGEQGFIKPSRSMVHIGG"
BASE COUNT         4694 a         6379 c         6449 g         4505 t
ORIGIN      
        1 ttcggccacc cccgggctgc cgaaaacgtt caccacaact cttgtgggat cggcaggatc
       61 catctcaata tctgtcacag attggttggt ggtgggtgtc tggatcgtca gccgcgtaaa
      121 tgtcggcgta ggtgaaagcg cattttgaga aacataaacg ccgcgcgtgg gtagtaccga
      181 gaaaacgtcc gcactcaagc cactgaatcc tgaggcggtc gagaccatga cctgattgtc
      241 atttgcagga ttgacgagaa tctttgtgat cgaccggccg gtgaataaat cgatcggcgt
      301 ggcatcggtg cttagatgga atggtccgct caggtttgcc gtggtggttg cattctggat
      361 aacgtaaacg cccaccccaa aaaagcagtc agctgagaag ttcccctcgc ccgtaccgat
      421 aaaaactgtg ttgcggttca gcggatcaat cgtaattgcc ccgatcgcga gcgactgggc
      481 cgcatccatg agtggcgtcc aggtagtccc cccatccagt gtgcgataca gcccaccttg
      541 agccgctccc acgtagacaa tgttcgcatc ggttggatcg atcgcaatcg cggtcactct
      601 gccgctcaca ggcacttcat tggcgggatt caggttggga tccgtctgcc catttggaag
      661 tgggctgggg ccaagttcgg tccacgtggg aacggcaaag ccaaccggtc ctgctgtggc
      721 gccgaatggc agcatgaagt tgcgatagaa ctgctcctgc agttccatgc cccgtatcgc
      781 gctgcttctc attttgggat tgcgggccag gtcgtccaca ccgcgaagcg tctggatgtg
      841 gcgctcacgc aactgcagat actccggctg cgaaatcctg ccgcgtgcca agggcggaat
      901 gtcagcgcta tcggcatcat tatcgggtgc catgattgcc tgcccggaat ccggagtttg
      961 cgccgcgctc ttcggatcag gcgtggtctg gcagatactg ttggctgtta aagaactgag
     1021 tagaaaaaac aaaaagaaac agcgggtacg cagcataatc ttgggagctc ccgtaatccg
     1081 ccaagatggc gggaaagcag cagggtccct ggtgaacctg cggaatcagc aatcccggtt
     1141 ccaggttcat gcgaacgccc tgagctaatg gatgatccag agtagctgta atggtggcac
     1201 cgctgattgc tgcaggtcaa tgcctgcgcg ggaaaaataa atagcggtgc ggcctcggct
     1261 gcaatgccgt tatcggcccg taagcgcagg attggataac cgctttatgc agggttccct
     1321 ataatcatat ggcccgtgct ggtttccgac ttcaacttcc accttcccga agaactcatt
     1381 gcccagcagc cacttgctga gaggagcgcc tcccggatgc tgcaactgga ccgctccagc
     1441 ggcgctttcc aggacctctg gttccgcgac ttcccggaac agctccaacc gggtgacctt
     1501 ctggtgttga acaacagccg agtcttcccc gcacgactct ttggtcaccg aagcggcgtg
     1561 cagtcccagc cgctgagttc ccgaaacccg gctgcgaagg agtttctgaa aggccgcgtt
     1621 gaagtcctgc tcacgcggca aatagcacca ctggaatggc aggcgctggt gcgtccggga
     1681 agaaagatcg gcgtaggtga gcgaatctcg tttggcgctg aaggtggccc ggcggaacta
     1741 tcggcggaaa tcaccgcccg cggtgaattc ggcgagcgca ccttgcgctt cgatccagta
     1801 ccggacttct ttgccgccgt ggaaaagctc ggcaacgtgc cgctgccccc atacatcagc
     1861 cggacggaca cgcgcgaaga ccgcgagcgc taccagacca tatatgccaa tcccgcagag
     1921 cgtggaagcg tcgccgcgcc tactgccggc ctgcacttta ccccggagat catggagcga
     1981 gtgaaagaac gcggcgtgga ggtggccgag attacgctgc acgtgggact cggtaccttt
     2041 cagcccctgc acgtcgataa agtggaagaa caccggatgc acaccgagca ttacagcatc
     2101 tccgaccagg cggcggatca gatcaatcgc gcactcaacg aaggccgccg ggtgattgcc
     2161 gtgggcacca ccaccgtgag gacgttggag tttgtcgccc gcgccaacaa tggccggatc
     2221 atcgtcggct ccggagaagc cgatgccttt atctatcccg gctttcagtt ccgcgtgatc
     2281 cgtggcctgc ttaccaattt ccacctgccc caatcgacgc ttctcatgct ggtttccgcg
     2341 tttgccggac gcgagaacgt ccttcgcgcc tacgaacatg cggtagcgga caaatatcgt
     2401 ttcttctcat acggcgattg catgttcatc gtgtgaccgg gccagtcctc cccaaagtac
     2461 aatttagttt gagagcaatc ctcggatagt ggcaggaaca gcggtggcct agactcaggg
     2521 ccatggaaac gattgctacg atgatgcgca cctctaaagg cgaggatctc tgggcacagg
     2581 tgatggcccg tgactcgaga tctgacggac ggttcgtcta cgcggtgaaa tccaccggga
     2641 tcttctgccg gcctacttgt cccagccggc gcccccggcg cggcaacgtg gaattcttct
     2701 cgtctacggg tgaggcgaaa tcggcgggtt atcgcgcctg cctgcgctgc cagcctgagc
     2761 agcccaacgc tcagctcggc aagatcgaag cggcgtgccg cttcatcgac cggcaccttg
     2821 aagacacgct gcacctgccc gcgatggccg cccacgtcgg cctgagcccg tttcactttc
     2881 aacgcctctt caagcgcact ctcgggatca gcccgcggca gtaccagcag ggacagcggg
     2941 cccgtaaata taagcaggct ctgcaaacgg aaccgcgaat cacagatgcg gtctatgaag
     3001 caggctacag ctcaaccagc cgtgcttacg agaacggcaa cagcagtctg ggcatgacgc
     3061 caacttcgtt ccgccgcggt ggcgagggag tccttatcaa ttacacaatc atcccttctg
     3121 aactcggatg catcctggtc gctaccacgg cgcgtggagt atgcgcggtg cggtttggcg
     3181 caaaagcatc cgaactggag agcgaactcc gtcaggaatt ttccgcagct actctccgtc
     3241 gcaatgatca tgccctccaa ccggcaactg aagccatccg ttcgttactc tccggatcac
     3301 cttcgctcgg ccgggttcca ctcgacattc agggtaccgc cttccagcag cgcgtctggc
     3361 aggccatccg ccagatcccc gcaggccaga cccgcagtta tagcgaactt gcaaaacaag
     3421 ttggcgcgcc gcgggctgtt cgggccgtgg ccagcgcctg cgcgcggaat cccgtggcgc
     3481 tggttgtgcc atgccatcgc gtagtacaaa aaagtggcaa gctggcgggt tatcgctggg
     3541 gattggaacg caaggccgct ctgctgcgcg cggagagcag cggacagcga tgatatgcta
     3601 aggaaatgaa tgcaaagcag gaagttcgaa cgcttctgga aaagctgcca gacgactgtt
     3661 cactcgaaga cattcaatac cacctgtacg tgctggaaaa aatcaggctc ggcctgcagg
     3721 atctcaattc gggaaagaca catactcagg aagaggttga gctgcgccta aagaaatggc
     3781 tcgccgagta gtttggtccg atcgggcact caacgaactt gaggcactcg tcgcattcat
     3841 agacgcggat tctcccatat acgcgaaaag tgtcgcacga aaaattgtag tctccactcg
     3901 tcggcttgct gctgctttcc cactgtcagg tcgcaccgtg ccggagcttg aagataccaa
     3961 tatgcgcgcg attttcgtgt tcaaccaccg agtgatttta tcgtgtgacg gttgacacga
     4021 tcgaaatcgt ttctgtaatc cacagcaagc ggttacttcc tagcagtttg ggtagcgaac
     4081 gagtaactta atgttcattc agcttcaagg cgcttccatc tacgtcgacg accagggcag
     4141 cggcagccca acgctgttcc tccacggcaa ccctgattcg tcgatcctct ggcgcggaat
     4201 catcaaccgg atgaaatctg atctccgttg catcgcgccc gacctgccgg gattcggcca
     4261 ttctggaatt ccagcgggtt tcaagtattc gcttcccgag ctaggccaat tcattgacgg
     4321 tctggtcaca gcgctcaaca tccgcgagcc tctgaatctg gtgatgcacg acttcggcgg
     4381 gccgtacggg cttgcctggg ctgtgaagca ttcggaaaaa gtccgccggc ttgccatcat
     4441 gaacaccatc ttcttcagcg actaccgctg gcactcatgg gccagaatat ggcgcacatg
     4501 gccgctgggc gaactcagca tggccaccac aacctggccg gcgttccgca tgatgatgaa
     4561 aaagagcgca ccgaatctca gtgacgaaca cttgcgcgag acgtattctc tcttcactcc
     4621 acgcacgcga aagatggtgc tcgacctgta tcgcgccacc gaccccgcca actacaagag
     4681 ttgggaggac caactcctcg agctcaccgc gcgtgtcccg gccatggtgc tctggggcga
     4741 ccgcgatcct tacgtctctt ccggctacgc ggagcggttt ggcgcaaaac aggttctcca
     4801 ctatcctgaa tacgggcatt ggctgccggg agagaacccg gatgaagttg ccgggcggct
     4861 tgccgatttc ttccttgaag cgcgagagaa cgcggttgct tcacagcgcc agaccgggat
     4921 atagtcaacg cccctgaatg aggcctgatg cgtaagattt ttcatttcag ctctccgcgc
     4981 gaccgctata aaagtgacgc cgctgtggtc tggtgttatg accatcgctt tagcctggtc
     5041 ttcagcaagc tgctgaagaa gctgggtgtg gacaatcacg atcccatccg cgtggccggt
     5101 ggcgccaagg tgctggcgtc gccaaccaat gaggctgacc gcgattttgt gctggagcaa
     5161 atcctgatct cgcgccgtct gcacgataca aacgatgtga tcctgatgct tcattccgat
     5221 tgcggcgctt acggcggact tacggcattt gagaacgaca ccgtgcgaga agccgagcac
     5281 caccggcagg agatgcatcg tgctgccgag taccttaagc agaagatgcc ggacatcaat
     5341 gtgaaggcat acttcgtgga ttttgatggg gtatgggagg ccgacctgga cggcagcgcg
     5401 gcttccgaac gcatagcgtg aaagcaacag aagtgaccca ggttggagtg ttatgtttca
     5461 tggggcccag gggcagtatc agtggttgga atctccctcg cattcccttc aggatttgtt
     5521 cggcgtctgc ccggatctgg taatgggcag atcgctcgtg atgacctgct ttgaggagcg
     5581 ctctcttacc gaaaagctgg aagcctgcgg cggtcgcacg atgggtccgg ttctgcacat
     5641 tcctgcagtt tccgatacct ctgctctgcc ggtcagcgcc gtaagcgagt ggtacgcctt
     5701 caccggcgaa atgccgcaag tgaagctggc gagctttata cggtccacct ggttcacgct
     5761 tggtccggct gcggtggcgc gtgtacagcc cgaaaatcgc tgggacctgc agcgcaccgt
     5821 ccgcctcttc tggcaggagc tgcaacgatt gcaacccgag tcttatgtcg ctcgcggcca
     5881 gcggctcctt atcgtcacgc ggaatcaaac gcacttcacg acgatcctgc gggcgttcag
     5941 tggtccccta aagaatcgcg caggcgatct gactgcgtag ccgaactcgc cgcgttatac
     6001 tcttgcccgg acatggccaa catcctttat ggtgtgaatg gcgagggcgc aggacactcc
     6061 acccgctcta aagaagtcat ctaccatttg atcgagcagg gaaacactgt gcatgtggcc
     6121 tcgttcgatc gcggcctggc gaacctgagc aagagctttg acgttactga gatctttggc
     6181 ctgcgcttcg cttatgtaaa caatcaggtg cgctaccgcc ggacagcggc aaagaatctt
     6241 ctcgccgctc caaaggccgc tcgcagcttc gcccggctgc tgcggctcac ggatgactgg
     6301 aagatcgatc tggtgatcac cgattttgag ccgctcacgg cgcggatagg ccatcatcgc
     6361 cgcatcccga taatctccat cgacaaccag cactgcctca cccacactaa cgtgaagctt
     6421 ccgcgccagc accggcgcga tgctgctgcg gcaaaaatta ctactcgcct gatgactccg
     6481 catgcacagg cctatttcgt gacttcattc tttcccgctc ggcctacaag aaagggcacc
     6541 ttcctggtcc ctccgatcct gcggcgcgaa gttctggagg ttaagccttc ttccggcaac
     6601 cacgtgctcg tctatgtgac ttcgccttcg ccggagttgg cgagtatgct gcgccatgtg
     6661 cgctgtgagt ttgtggccta tggcttcggc cgggaggggc gcgatggcaa catcgactac
     6721 aaaatgccta gcatggaagg attccttgcg gatctcgctt cgtgcaaagg gattgccgcc
     6781 aatgccgggt tctctctggt aagcgaagct cttcatctgg gcaaacctta tctggcaatt
     6841 cctgtcaagc accagtttga gcagatcttc aacgcttact tcctggccca gcagggctat
     6901 ggtgcattct gggaagagct gagcagggaa aagatcgagt cgtttctctt caacctgccg
     6961 cattacgctg aagcgctggc cgcatatgcg cgccaggaca actcagcttt gctggcaaag
     7021 ctggaccaga ccattcggga gtgggccggc cgctctaccc agcggcgatc gctgttacgc
     7081 cgccgggagg cctcgcaatg agcgttgaag aaccgctccc ggagccggag caggaaccca
     7141 agccagctac gttgatcgaa attgccacgg tggcggcgct agctgcctca atcgccgcac
     7201 tccttttatt tgcgtggctc gccagcgaga tgcgcgaagg cgacacgctg aaatttgacg
     7261 ccgctgtgcg cggatgggtg catctgtttg cttcccccgc gacgacgcga gtcatgagct
     7321 tcatttctct gctgggcgat caggttctga tcgcggagct gatcattgcc gtggccgtct
     7381 ttctgtggct gcgctggaag cgcggcgccg cgtggctggt tttggccacc cttggcggag
     7441 tgattctgga tacagttctg aaacactcgt tccaccggca gcggccggtt ccattttttg
     7501 gcagcgcact gcattcttac agctttccca gcggtcatgc gctggtttcc ttctgctttt
     7561 atgcggtgct ggcgggcctc attgcagacc gcgtgcgccc gctctggctg cgcgttctag
     7621 ttggcctgat agcagccgcg ctggtcattt ccatcggaat ttcacgcatt tatctgggtg
     7681 ttcactaccc aagcgatgtg atagctggct atctggctgc cgccatgtgg gttggcacca
     7741 tccttgccct tgaccgcatc agggcacggc ggcgtcggcg cgcttagcgg catggaaatt
     7801 gccttccggc cgttcggcag agagccggac taaccggcgc gactcgcggg ccgggcgcga
     7861 tcgctcatac tgcaaaaaat catggatggt gcggcgagca tcgcgatagc cctgcacaat
     7921 aatcggtccg ataatgtcgc cgtcgaaatc gagggcgttc gccttcagcg gctgctcagg
     7981 cgcaatatga aacgattcca catagcggta gcgttggttt cctatctcca gctccacctg
     8041 ttcaggttcc actcccagtt ctgaagcgta tgcgcagcac aggcggttga agttgttcag
     8101 caacgcgata tcggatttga agttcttgga aatcaggatg tcgacggcat ggacgcctac
     8161 atcgagaaag gttttaatgg cgccggaatt atcctcccct tccaacggtg acaacagaac
     8221 cagaaaaatc acgtccgctc ccaggcgcat cgccggcaga atcggctggt tggtcatgat
     8281 gccgccatcg gtccacagcc tgccatccat cggcacagcc tcgtaggcga aggtataaga
     8341 agaggacgca acagcggcat gcaccaggtc ggaaggctgc tcgatctcgc ggcgaacgaa
     8401 atcgctgtgt actgcaggat ccttcaacag ctcgtcaact gaaacattgc tgaagaagcg
     8461 gcccgatccg tgctggatgt cggtggccgt catgatgacg cggatctgcg attcacgaag
     8521 ccgctcctgc gggatgcggg cacgcaggaa cctgatgcgg tcgaaattcg ggaacagccc
     8581 tgtgcgcagc ggcatgcgca gaaaggcgtg actcaccctg ctgagcggct cctgaaagag
     8641 cttgtacaag ccgatggcgc cggcaattac cgctaccgcg ggaagtggcg cgctcagttc
     8701 caaaggacgc cccgttctcc atggcaggtg aatgtgggtg aaagccagga acaggacgat
     8761 aaagccccac accagcacat tggcgccgag cgagacccag gcttttctgc ggtccggctc
     8821 ccagttgagc ccacgcagaa aattcaacac cacgtaacca atgtaagaga gcttgtcggc
     8881 aaaaagcaga atggccacgc cggcaagcgc caaggagatc caggtgaact tgggatgatg
     8941 tgcgtggaga aagattccgt gctcctgaag ccattgccag acgaagtttc ccacgcccgc
     9001 ggacgcagcc accaggccag ccagcagaaa tacataacgt gaccagtcaa tccccagcgt
     9061 ggcgggcgtg agttccatcc aggaattcac cagcgtttcg gccttgccga ccaagccatc
     9121 ggagtgagcc gcgtaagagg ccgcgttgat gctgccgatc gaggttgccg tgagtatgtg
     9181 ggttgggacc tcggcatcct gaaaagccat cagcgcgccg gcttcatagg cgccgcgtgc
     9241 gcctccgccc gacagcacaa ccccgatgcg ggaagcgtaa cggggaacag cttccgcggc
     9301 aagctcttcc ctgaactcat ggcgcagctc ttccagctcg gccatggcgg ccgccccgcg
     9361 tccctgggtt gggttgattg gcatggttaa ggcaaagaat accccagctt cgtgcgtccg
     9421 ggtacgtgtc taatccggct accgaacacg gctggcgcaa gacttctgtg cgtaacgatt
     9481 tgaaaggaag gaatgaggaa taaaaaaaac ggcgcaccac aatgggtgcg ccgttcaagt
     9541 cagtgctgtt acattccggg gttgttggcg ttggactcgt ggaaagcctg acgaacgtcc
     9601 gccaggaaca gcttagagtt cgcgttggcc ggaccttgtc cgttgagaat ctggtcaaac
     9661 gatagagcct tgccatagta ggtgcgggtg gagtcatcat ccggcttcac cgatgcgccg
     9721 ctgagatcca gacctgcaaa cagccccttg gtctttgaat agacaaggat tttgttcttc
     9781 atcttccagt ctgtgctggc ctgggcctcg cgaccaatcg gccctgccgc aagacctgct
     9841 tctccgccaa gtttgaactg cgaactcagc agctctttgg ctccggcgtc gccaagaaac
     9901 accatgacga ggtccaccga ttccacaccg atctgggctc cccagctgcc accggtgatc
     9961 gccagaaatg cgggctggct ccagccattt ccggttcggc aggtggcaac accgcggcca
    10021 tgctgtgcgc cgaaaacgaa accgcccttg accatgtcag gaacaacggc gatgcacttg
    10081 gcatctttca gcacgtcctg cggaatggcg ttttccggaa tattcatcag ctgcttaagg
    10141 tcatccccag cgttgcgcag ccgctcgaca acctgcgcct gctctccgta aacggttttg
    10201 ccggagaccg tctgggtctc atggtgggtg gaacagccca gcaccagagc agccatggcc
    10261 ggcagtacga tggcaaatag ctttctcatt gcttttccct cctgtaagcc ttccgggaca
    10321 gcggccgcgc aaagccttgg catgtgaaaa ccagggtggc cttccggcag ctccagcgaa
    10381 gacagcgggc attcttccgc cgttctgtat gacggtgcgg gttaaggcgg agttgtactg
    10441 ctagtgaagc gttcacgcta tccagggggt gacgttcttt taagcacgcg cggggcagca
    10501 gaaccgcctg cgaatgacga ttccaagtag cctctcaatt gggcataagc tgcaaataca
    10561 actcttctcc ttctttctgc cttccaaagc agcgaggtga cttggatgaa ttcgaggttg
    10621 ttggcttctc tggcgctggc tcttacgctc tctcccgtac tcgcgcaaga taatggcggg
    10681 atcaagcagg acaccaaaga tgccgctcac tccactggcg acgcagcgaa gaagaccggc
    10741 cataaggtta agaaaggcac aaataaggtg gtacacaagg gcgcgcacgc caccagcaaa
    10801 ggcgcgaaca gcgtggaaga caagaccaaa cccagcccga gccccagtcc gcggtagagg
    10861 caaaaacaag cagagtacct ttattttgtt gacgttcgcc ggagttggac ttaatatccg
    10921 cttcagccgc ttcgtccgtg gcgaccatgc ataaatcagt gaaaaatgcc gcacggaaac
    10981 ccgcttcggg tgacgtgacg atcccggaca agctctattt ccgcattggc gaagtaagcc
    11041 ggctgtgcgg attgcccagc tacgtcctcc gcttctggga gaccgagttc ccacaactca
    11101 aaccaccgaa aagtggcact ggacagcgca cttaccgccg cgccgacgtg gaaaacgtcc
    11161 tgcggatcaa gaagctgctc tatgacgaag gcttcaccat ccccggcgct cgcgcccagc
    11221 tcaaggcaga gatgaggcgt aagcagagtc cgctgccctt cgtggttccg ccttcgaacg
    11281 tgagcgaatt gaagcaggtg cgccagggac tctgcgaaat tctgggcatt ctggcgcacc
    11341 ggcggcaggc cgcccgccag tcctaacccc taagttttac agcaccataa ggaagccgag
    11401 ctgcatccaa cgatgaagcg gctataatta ggacatagac tcacttttcc agtggtcgcc
    11461 cgtcttaaag gaacaggtct ctactcgatg tcgaaaaagc ttcaagttct tcttctttcc
    11521 agttccatgc tggttgttgt atttgccctg atcggcggtc tgggagttca cgcctccagc
    11581 agcagtagca acgctgatag ctcttatacc cacatgcagg tgtatagcga agtgctgcac
    11641 cgtatccgta ccgagtacgt ggaagagccg aacatgggcg ccgtgaccaa cggcgcgctg
    11701 cacggcttgc tggaatcgct ggacgcagat tccagctatc tgagcccggc ggagtacaag
    11761 gcgtatcagg ccagcaagac ggacgcgaag gcaggagtgg gagcggtagt ctcaaaacgc
    11821 tttggctatg ctgcggtggt atctgtgacg cccggcggtc cagccgacaa agcggggatt
    11881 aacgcgggag acattttcga gacggttaac ggcaagagca cacatgatct ttccctggct
    11941 gcgatcagga cccagttgct cggtgatccg ggatcgcgcc ttgaagttgt gctcattcgc
    12001 gcacgcaaag tggagccgca gaagctaacc attgtgcgcg aggtagtgaa tcctcctgca
    12061 gtgcaggctc agatgatgcc ggagaacgtc ggctacatca aggcgcaggc gctcaccaag
    12121 ggcaaggccc aggatatcgc cacaaagatc aaagagctgc agagcaaggg cgccaagaag
    12181 ctggtgctcg atctccgtaa caacgcggac ggcgatgagg atgaagggat cgcggttgcg
    12241 aacctgttcc ttaacaaggg catgatcagc tacctgcagg gccagaagta tcccaaagct
    12301 acatttagcg ccgatccgca gaagaagatc accgatctgc cactggccgt gatcgtgaac
    12361 cgcagcactg ccggtgcagc cgaaatcata gcctctgctc tgctggacaa cagccgcgcg
    12421 gacgtagttg gcgagaagac ttttggtgaa ggctcggtgc aaaaagttct ggacgttccg
    12481 gatggctctg cgctgatcct ctccgtggcc aaatattaca cgcccaaaga caagatcatt
    12541 caggacaccg gcgtaacacc caacgtgctg gttgccggag gcctggaaga tgtaacggca
    12601 gtgaccgacg acgacagtga ggtcgcgccg gacgagccgc agcagagcaa gccgcagcag
    12661 aaacaggatg acgaccaatt gaagaaggcg atagacgtcg ttaatcgcaa aacgcagaag
    12721 tcttagggaa cacctcaggc agcacccctc ctccacaaaa gcgcgctctt cggagcgcgt
    12781 ttttgtttgt gaagggttct gcagttccgt ctagatcagc gtcctaaacc gatgggataa
    12841 atcgtctccg gttcagcaac attcgtgatg tactcctgtg tgcttgagct tagggcttta
    12901 gacccacaaa tagtgctatt ctggccttgt ccacttccca gccatgaagt tcctgtactc
    12961 agacctgccg gattttcaca tcgccggaaa gaaactggtg ggcaaagttg tgttttgcct
    13021 gctggtgctg ggagccgcac tggccgggac actggtaggc ctgctgatcg tttactccac
    13081 tgacctgccg cagatcagcg aattgcagcg ctaccggccc agcacgatca ccgagctcta
    13141 cgatgcgaac ggcaaagtga tcggaagctt tgccctgcag cgccggattc tggcccagta
    13201 caacgatatt cccaaggtcc tgcgcgacgc gattctctcc accgaagata aggatttcga
    13261 aactcatctc ggcatcaatt tctggcgggt gctgggagcc acctaccgcg accttacatc
    13321 gaactcgcgg gcgcagggag cttccacgct gaccatgcag ctctcgcgca atctcttcct
    13381 ttccccggaa cgtcacttca gccgcaaagt ccaggaggcg atgctggcca tccagatcga
    13441 gcggcatttc acgaaagaac agatattcac tttgtacgcg aaccagattt ttctgggcca
    13501 tggcgtgtac gggtttgaag ccggagccca gtattatttc cacaaaccgg cgggcgaact
    13561 gaagctggaa gaagctgcgc tgcttgccgg attgccgaaa gccccggtga gctattcacc
    13621 catcaatttt cctgaaaggg cgattaaacg gcgcaatctg gtgatcaaca atatgctgga
    13681 agacggcaag atcaccgcgg aagatgccgt gcgcgccaag gggacgccgc tgcatctcca
    13741 cattgagcag gaccagtcac cagcgcctta ctttgtggaa gaagtgcgcc gatatctgga
    13801 aagaaagttt ggttcagagg aagtgcatga aggcggcctg cgggtctaca cttcactcga
    13861 ccttgatctg cagaaagcag caaccagcgc ggtacttgac gggcttgccg cctatgagcg
    13921 tcggcacggc tggaagggcc ctctgaagaa cgtgctggat tcaggtgaga agctggacca
    13981 tttccaaagc cccgactggt cacagcccat cacaccggga agctatgttc atggcctggt
    14041 gatggacatc gggctgcaat ttgcgaagat caagctaagc acccacagcg cctatatcgg
    14101 tcctggtgaa ctggcatgga caggcagcaa gctgccgaaa aagctgctaa gagtcggcga
    14161 tctggtgtat gtgagagtgc tctccattgc cggcgacggc acaacccgtg tgactctgga
    14221 acaggattca ggagcacagg gtgcgctgct ggcaatcgac aacgccagcg gcgacatcaa
    14281 agccatggtc ggcgggcgtg actatacaga gtccaaattt aaccgtgcct tgcaggcgca
    14341 gcgccagacc ggctccacgt tcaagccatt cgtctacgca gcagccgtag aacagggcgc
    14401 ccggccggac gacacgatta ttgacgagcc agaaactttc ctcagcaatg gcacgcctta
    14461 tacgccgcac aactttgacc atcgctttga aggcaagatc acgctgcagc gcgcgctggc
    14521 tgactcgcgc aacatcccgg ccgtgaaact ggctcagcag attggcatga acaaagtggc
    14581 ggaatacgcg cgccgcttcg gcatcacgtc gcccattccg ccctatctgc cggtcgcgct
    14641 cggtgccgcc gatctcacgc tttacgagca gaccagcgcg ttcagcgtat ttccggatga
    14701 tggcgtgcgc attgagccgc gtctggtccg caagatcacc gactacgatg gccatgtaat
    14761 ggccgaagaa ggacccgaag cccgtgacgt gatcacggag caggcggcgc gaaccatggt
    14821 ttcactgctg cagggggtgg tgctgcacgg gaccgcggcg ccggcgcgca agctgaatca
    14881 tgcgctggca ggcaagaccg gcacaaccaa cgactacacc gatgcgtggt tcattggctt
    14941 ttctcccagc atgactgcag gtgtgtgggt tggttatgac gaaaaaaaga cgctcggtga
    15001 taacgagacc ggcggccacg cagccctgcc gatctggatc gacttcatgc gcaccgtaac
    15061 cgcaaaccca ttgatcgcac gagaatcgtt cccgggaacg cagatcaata ccgcgcctcg
    15121 cgtggccctg aagcgggccg cggtggtctc gcttaagcgc cccacggcgg gagtccactg
    15181 agtggtactc aagattgccc gctacctgct gcgcgccctg gtgctgctgc ttgtttttct
    15241 cggagcagcg ctgcttgcca tgcgcgtggc gatccacgat cgcgagatcc aggtgccaaa
    15301 gctggttgga ttaagcatgg ccgaagccga acgcgtggcc aatagcaaag gaatggtaac
    15361 gtcaatcgcg agccgtttct acagcactga aattcctaaa ggccacgtgg tggcgcagat
    15421 gccgaaggct gagagcactg tacgccacgg ttcgaagatc ctgatctcgg agagcctggg
    15481 cgcgcaaaag gccgctattc ccaacgttgt ggggcaaagc gaaaacgccg cccggatcaa
    15541 cctgaagagc cgaggtctac aggaaggcag cgtgacatct atccggctgg caggcgccgc
    15601 gccggggacg gtgattgcgc agtcgccctc acccgattcg caggaagtta actcgccaaa
    15661 ggtgaatctg gtgctggctg ccaatgacga ggcagcgcaa ttcgtgatgc cgagctttct
    15721 tggtaaaccg ctggccgagg ccgcagcagc cgcggacaaa gcagggatgg tcgtcgcgaa
    15781 tgcgcctaaa acacaatcca gcgatgccaa gactgctccc gtgcttaccg ggattgtggt
    15841 gaagcaatac cctctgccgg gtcagagggt ggctgcagga gaaaagattt ggtttaccgt
    15901 cagcaagcag agcgcaacca ctcccgcgga gagcaaccat tagtccttag ttacttctcg
    15961 ttctaggcac gtcggttcag gttttccgtt ccaaaatcgc ggcaaaaaat ccgtcacaag
    16021 gatgaaggcc cggtagtgtt cgcaggaatt cgccgcttgt taggctgccc ggatctttcc
    16081 agacaagttc tgctgagttc tgcagccggg caagctcttc tttcaccgga atgatgctga
    16141 aatctgcgga tgattgcagc gcgacttcaa ctaccgtccg gttctcttca gcttccaaag
    16201 agcacgtaga gtacaccagc cggccgccgg gtgctacgtg gcgcatggcg gcccggacaa
    16261 tcgcgatctg gcgggcttgc aaatcatgaa tgtcctccgg gcgcagacgc cactttattt
    16321 ctggattgcg ggccagcgtg ccggtccctg agcagggcac atcagcaagc acacgatcaa
    16381 actctgctcc atacggaagg ttggtggcgt ctgctgttat gacctgaacg ttgtcttgtg
    16441 gcgccctacg tcgcagcagg cgcgcgcgat gagggtgcag ttcagcagcg aagatctggg
    16501 cctcaggcat gcgcgtggcg agtgcgccgg tcttgccgcc gggagcggcg cagcagtcca
    16561 aaatccgttt gccgctgccg acgagcgtag ccacgagttg cgagccttca tcctgaattg
    16621 caatctgcgc tgaacgaaac agctcggatt gcgtcacatc accggagcca actttggcag
    16681 cgctgcgcaa cagtgcggcc ggctcaagct caataccttc ctgggtaagc tgctcgtgct
    16741 gctgagcgtt agcgagccgc agggttgtag cggggatcgt ctggtcgaat ttgcagatca
    16801 gcgcagcggt ttcatcgtca tactcttttc tccaccgctc taccagccat tccggatgag
    16861 cgtactctgc cgcgagtccg ggcttagtcc atggatgctt gcccgagcgc tgtgcgccct
    16921 gaatcttccg cataaccgcg ttagcaagac cggctgctga tgtcttcttc gagagcttca
    16981 cgagttcgac ggtttcattc acggcggcat gaggcggcac gcgagtgagc aagagaatct
    17041 gataaacccc catgcgtagc gctgtgagca cctccagatc gagcttgcgc atgggcgaga
    17101 aactgaaata cgcgatcgcc tcatccagtc gtgagcgcca gcgcaatacg cccataacga
    17161 tttcagtgac aagattgcgg tctggcggtg agagttcttc cagcatttcg gaatgaagca
    17221 gctcagtggc gtacgcggat tcgcgctcta cacgcaggag gatctggaag gcggcgactc
    17281 gcgcgggcga agcaggcacg gcgctcagcc cagccgctcg cccggtgtgg ggcgatagcc
    17341 gctgatgaag tcacgcgccg acatgggctt tttgccttcc ggctggagtt ggagaagctg
    17401 aagaacggtg ccctcaccac agccgaggaa aagttcgtag cccgcgacgc gcagctcacc
    17461 gggtgggaca ttgtgagctt cgccaccggg tcgaaccgta atcagcttca ggttcttgcc
    17521 acggaagccg gtgtaagctc ccggccacgg ctgaaagccg cgcagccggt tgtggatctc
    17581 acgggcactg cgctggaagt ccaccaaacc atcttctttc ttgagaattg gtgcaagcgt
    17641 ggctagggaa tcgtcctgcg gcacaggatc ggcctcgccc tgctgaagct cggtaagagt
    17701 ttcgatcaac agtgaagcgc caagctcggc gagccgcggc gccagcgtga ccgccgtgtc
    17761 gccgggctca atagcgagtt cgcgtttcag caggatgtcg cctgtgtcga gcccttcgtc
    17821 cagatgcatg gtagtcacgc ccgtaacggt ctcgccgttc gcgatggccc actggattgg
    17881 ggccgcaccg cgatatttcg gcagcagcga cccatgcacg ttgatgttgc cgaatcgagg
    17941 caacgtgagc atccaaggtg gaatgatacg gccatagcca accacgatga tcgcctccgg
    18001 ctcgatctgt tccaggcggc gctgaaattc ctcatttttt ttgatcttct cgggctgggc
    18061 gaccggcaga tgcagccgca gggctgtctc ttttacggga ggcgccgtca gttccatgcc
    18121 gcggccctgt ggccgatcgg gttgggtgac gaccagctga acatcatgac ctgcggcggc
    18181 cagcgcctcc agactgggaa cggcaaactg gggcgtgccg cagaagacca gcttcatggt
    18241 cttaggccca ctcgccgacg cgcatcaatt tttttatctt gcgaatcatc aggtcacgct
    18301 tcaggcggct gatgtggcta atgtagagct tgccctgcaa gtgctcggtt tcatgaacca
    18361 gggctcgcgc aagcaactcc tcgccggtgg tttcaaacca gttgccttcc agatcctgag
    18421 cgcgcacggt cactttgttc ggacgagtca cattctcgcg gaagtcaggc aggctgaggc
    18481 agccttcttc acctttctgc gaaccttccg ttttaatgat ctcaggattt atgagcacca
    18541 gcttggcgtt gggatcttcc ttgaaggtta cgtcaatcac agcgatgcgc ttgccgatgc
    18601 cgatctgcgt ggcagccagt ccaacgccgt gggccgcata catggattcg aacatgtctt
    18661 ccgcaagctt cttgagctcg tcgttgaatt cggtgattgt ttcggctggc gcttccagca
    18721 ccgggtcacc atacttcaca atggggtaaa ccatctgcct cgtcagaacc tctgcagttg
    18781 ttgtttatag ccctcaaagt tgcggagggt ctccagcatg gaatcgccgc cgaatttctc
    18841 cagcgcgcaa tgggcaagag tgagcgcgac catggcttcc gctgcgacgc cggctgcagg
    18901 gaccacgcaa acgtcggagc gttcgtaagc ggccttgacc ggctcgcggc tggcaaagtc
    18961 aatcgagccg agcgggcgac gcaacgtgga tattggcttg agataacctc gtaccagaat
    19021 gtcttctcca ttcgaaatgc cgccttcgat tccgcccgcg tggttggatg cacgggtaaa
    19081 tccggtgaac gccgattgcg cagtgctacg ctcatacccg atctcgtcgt gcacggtgga
    19141 accgaaggcc aatgcagagc caactccggt cccgatctcc accgccttca ccgcctgcag
    19201 tgacatgacc gcctgggcaa gcaagccgtc gagccgctcg tcccactgcg cgtaagtacc
    19261 gaagccggga ggaacgccgt gggcaacgac ttcgaacact cctccgaccg aatcgcctgt
    19321 acggagcgcc tgatccacgt cggctttcat gcgctgttca gtttcaggat cggcgcagtt
    19381 tagcaggact tcgtccttcg cgtgcaactc ctgcagccgt gaccacagaa cttcagcatt
    19441 ctgcagtgat gcgtggccaa cagcaatcac atggctgaga acttcaatgc ccagatgacg
    19501 tagaaagagc ttcgcaattg ctcccaaagc gacgcgggaa gtggactcac gtgccgaggc
    19561 gcgttccaga acataacgcg cttccgcgaa gttgtacttc agggcgccgg cgagatcggc
    19621 gtgacccggg cggggcgacg caacgggttt gtgcttctcc gcgtcgccgg tctccaccgg
    19681 caaagactcc tgccagttct tccagtcgtt gttggccagg aggatagcga tgggagaccc
    19741 gatggttttg ccgtgccgca cgccggaaac aatatgcgca tgatccttct cgatcttcat
    19801 gcgtccgccg cggccaaatc cctgctggcg acgccacaat tcgcgatcga tgaactgctg
    19861 gtctatctcg agaccagccg ggacgccgga gaggaaggcg acgagcgtct ctccgtggga
    19921 ctcaccggca gtgaaatagc gcaacatagt gtcagaaaac gggcctgggc ggcaaaccat
    19981 tgattgtagc cgatgaaagc gagcgtggag aatcggcggg cttcacgcaa ccggcagggt
    20041 tcccataagc tcttatccat ggatatacgc ctgctcacgg aagccgacgc agaagaatgg
    20101 tggcatatgc ggcgcctggc gctggccagc gagcctgctg catttgcgga atctgtagaa
    20161 gaacacgaaa gaaagagcgt ggaggacgcg cggaatttct tccgtgcgaa ctcggctgag
    20221 aactttgtgc ttgggtactt cgagggcggc aggcttgcgg gaaccatggg ctattatcgt
    20281 gagaaacacg ataaattccg ccataaaggt gtggtctggg gcgttttcgt gcacaaggag
    20341 tcacgcggaa agggcgtggc gaaggcgctg ctcaccgaga ttattcgccg ggtacggcag
    20401 gttccgggga tcgagcaggt gctgctggtg gtggccgcgg ggcaggcggc accgaaacgg
    20461 gtatatgagt cggtgggatt tcagcattac ggaacggagc caaggtcgct caaagtgggc
    20521 gataagtaca ttgatgacga gttgatgatt ttgtacctgt agccgctcaa actctcaggg
    20581 gcttgcacct atcctctata atggttgcta aggttccgac cacactcagc ctcaggcata
    20641 ccggctcggt gtggcggctt cttgctctag atggcaagga caagggttca gccggaaacg
    20701 gctgggcctc ccgtttggaa aggaaccggg gcgcttcatc gctgctcccc cttccttctc
    20761 gtgtcttcac catcctgagt tgttgattcc aaagggttct gattgcgcct ccaggacaaa
    20821 ttcggccgct acatcactga cttgcgggta agcatcacgg accgctgcaa ctaccgttgt
    20881 gtctattgcc gcaccggcaa tcagggcgcg cagtactcgg aacttccctt ttctgaatat
    20941 ctccgaatgg ttaagttgct ggtggggctt gggatcgaaa aggtccggct caccggcgga
    21001 gaaccactcc tgcgcaatgg tgtggtggat tttgtgcgcg aagtagcgaa gctccggacg
    21061 ctcgacggcc agccgccgga tattgcgatc acgaccaacg gccatcttct ggaagatatg
    21121 gctgcgccgc tgaagcaggc ggggctgcgc cgtgcgaccg tgagcatgga tgcggtggac
    21181 gcagaaaaat tcgcgcgcat cacgcgcgtg cacaatggct atgaagcggt gctcgccgga
    21241 atccgggcgg ccaagcgcgt ggcgctggaa cccgtcaaag tcaattgcgt tctgttgcgc
    21301 ggcttcaacg aagatcagat tatcgagttc gctcgcttct cacgtgagga aggcgttgta
    21361 gtgcgcttca tcgaatttat gccgctggag gaagatcgcg tgtggtcgcc ggacgtggtg
    21421 gtgggtatgg atgagattct ggcgaagctg aatgagtttc gcccggtaaa gcagcttccc
    21481 aacgctccca gcgagaccgc gcgccgctac accttcgacg acggcaaagg cgaaatcggg
    21541 atcattgcgc cggtgtcgca tccgttctgc ggccactgct cacgaatccg cattacctct
    21601 gatggcaaga tccgcacctg cctgttctca ctgctggatc acgatctggg ctcacgcatg
    21661 cgcgcggggg caacagacgg cgaacttact gattacgttc gttcagtggt ctcccagaag
    21721 gaggcgcggc atcatattgg agaacaaggg tttatcaaac cttcccgtag catggttcac
    21781 atcggcgggt gatttcagat tgcaaagtag taactattct gagtagaatc cgcgcatcct
    21841 tccccaaggc ttgaatcccg ggcagtttcc gttcaaaaat cgcctggaaa gaaaacagga
    21901 caatgcccga gtgcgccggg ccgggcgctt cgggataatc gatagcttcc atgacgcttg
    21961 cggtagaggt cgccggaaaa actgacgtcg gttgcgtacg cccgaacaac gaagacaact
    22021 tcgggta
//
LOCUS       DASQYP010000363         2742 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_57919, whole genome shotgun sequence.
ACCESSION   DASQYP010000363 DASQYP010000000
VERSION     DASQYP010000363.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 2742)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2742)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2742
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_57919"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..617)
                     /gene="dnaN"
                     /locus_tag="VE783_11930"
     CDS             complement(<1..617)
                     /gene="dnaN"
                     /locus_tag="VE783_11930"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: protein motif:HMM:TIGR00663.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009360 - DNA polymerase III complex
                     [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit beta"
                     /protein_id="HYX54153.1"
                     /translation="MEISVSKQDLLRELTATQGVVERKTTIPILSNFLFEASGDKLSI
                     TATDLDLSLRTSCSAKVKKEGSCTVPARKLYDYVKLLGDGDISVKLLENHWVQIRSGR
                     SNTKMVGMARANFPALPVFPNESAIQLPAQVLRNLIAKTIFSISNEESRYTLNGALMV
                     LKPESLTMVATDGHRLAHVENTNAKIPVSGELKVLVPKKAMAELST"
     gene            complement(933..2324)
                     /gene="dnaA"
                     /locus_tag="VE783_11935"
     CDS             complement(933..2324)
                     /gene="dnaA"
                     /locus_tag="VE783_11935"
                     /inference="COORDINATES: protein motif:HMM:TIGR00362.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003688 - DNA replication origin binding
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006270 - DNA replication initiation
                     [Evidence IEA];
                     GO_process: GO:0006275 - regulation of DNA replication
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chromosomal replication initiator protein DnaA"
                     /protein_id="HYX54154.1"
                     /translation="MALSTATISATANPWLQILSAIEKKISRHSYDTWLKPTRFSHAN
                     GKVIFVRVPTPEFRHIGEKFGDLIQEAMDSFAPDYQDVKFITAEEDPTVAPVRPDGGF
                     GPVSATNAPAAAGKQQRFDWDSAAHLNVKYTFDAFVIGAGNQFAHAAAQAVAERPSKA
                     YNPLFLYGGVGMGKTHLMQAIGHEVKRRQPHASICYVSSEKFTNEMINSLRYDKMTSF
                     RDKFRNVDVLLIDDIQFLAQKERTQEEFFHTFNALHESMKQIVIASDRPPKELAEIED
                     RLRSRFEWGLIADIQPPDLETKVAILQKKAETERVTLTTDLALYIASNVRTNVRELEG
                     ALIRLIAYCSLTGAEVNLITAQQVLKNFIDSQARKITIDAIQKAVAEQFGLRATEIKA
                     KSNSRAIVFPRQVAMYLAKQMTEASLPEIGRQFGGKHHTTVMHSIDKIEEKRQGDKDL
                     NRLLNKLTETLNS"
BASE COUNT          587 a          736 c          773 g          646 t
ORIGIN      
        1 gtgctgagtt cagccatggc ctttttgggg accagtacct tgagttcgcc gctcactggg
       61 atcttcgcat tggtattctc cacgtgggcc aggcgatgtc cgtcggtcgc caccatggtc
      121 agcgactccg gcttgagcac cataagggcg ccgttaagcg tatagcggga ttcctcgttg
      181 gagatggaga agattgtttt ggcaatcagg ttacgcagca cctgtgcagg aagctgaatg
      241 gccgactcat tcgggaacac cggcagcgcc gggaaattgg cacgcgccat gcccaccatt
      301 ttggtattgg agcggccgct gcggatctgg acccagtggt tctccagaag ctttacgctg
      361 atgtcaccat cgccgagcag ctttacataa tcgtaaagct tgcgtgcggg gacggtgcag
      421 gagccttcct tcttcacctt ggcggagcat gaggtgcgca ggctcagatc tagatcagtg
      481 gcggtgattg agagcttgtc gccggaagct tcaaacaaaa agttggaaag gatgggaatg
      541 gtcgtcttgc gctccaccac tccctgagtg gcggtgagtt ccctgagcag gtcttgcttg
      601 ctgacgctga tttccatcgt tgctccagcc tcggtgccgg tggaagaagc cattatctga
      661 ggccccctaa tattatctgt ttctaaatga atgagaaaac taagtatata cagcagtaac
      721 agcagatgcc tgcggaaaag tgggaaactc gcctaagcca ttccatctga gtgcattgcc
      781 aagcttgctc cgtttgattt cacgtcccat cggctggatg aagtgagtga aacctggcga
      841 ctgctgctca ttgcttccgc gtcttgcacg ctttccacaa accgtccaca acaacttcag
      901 atgaaaaccg cgcctcaacg aggaaaacgc gcctagctgt tgagcgtctc cgtcagcttg
      961 ttgagaaggc gattcaggtc cttgtcaccc tggcgcttct cctcgatctt gtcgatcgag
     1021 tgcatcacgg tggtgtggtg ttttccacca aactgccgcc caatttcggg aagtgacgcc
     1081 tctgtcatct gctttgccag atacattgcc acctggcgcg ggaagacgat tgcgcgcgag
     1141 ttgctcttgg ccttgatctc cgttgcccgc aacccgaact gctcagccac ggctttctga
     1201 atcgcatcaa tcgtgatctt gcgcgcctga gaatcgataa agttcttcag gacttgctgg
     1261 gccgtgatca ggttgacttc agcgcccgtc aaagagcagt aggcaatcag tcgaatcagc
     1321 gcgccttcca gctcgcgcac gttggtgcga acattcgaag caatgtacag ggcgagatcg
     1381 gttgtgagcg tcacacgctc ggtttccgcc tttttctgca gaatggcgac cttggtttca
     1441 aggtctggcg gttggatgtc tgcaatcaat ccccattcaa agcgcgaacg aagccggtct
     1501 tcaatttccg ccagctcctt cggcggacgg tcactggcaa tcacgatctg cttcatcgac
     1561 tcatgcagcg cgttaaaggt gtggaagaac tcttcctgag tgcgctcttt ctgggcgagg
     1621 aactgaatgt catcgatcag caggacgtca acattccgga acttgtcgcg gaagctggtc
     1681 atcttgtcat agcgcagcga gttgatcatc tcattcgtga acttctcgct ggagacatag
     1741 cagatggagg cgtgcggctg ccgccgcttc acttcatgac cgatggcctg catgagatgg
     1801 gtcttgccca ttcccacgcc gccatacaag aacagcggat tgtaggcctt tgagggccgc
     1861 tcggcgactg cctgggccgc cgcatgagcg aactgattgc cggcgccgat cacaaatgcg
     1921 tcaaacgtgt acttcacatt gagatgtgcg gcggagtccc agtcaaaacg ctgctgcttt
     1981 ccagcggccg cgggagcatt ggtggcagag acagggccga atccgccatc agggcggact
     2041 ggagcaaccg tgggatcttc ttctgccgtg atgaacttca cgtcctgata gtcaggagcg
     2101 aatgaatcca ttgcctcctg aatcaggtcg ccaaattttt ctccgatgtg ccggaactcc
     2161 ggcgtgggca cgcgaacgaa gatgactttg ccgttggcat ggctgaagcg ggtcggcttg
     2221 agccaggtgt catacgagtg gcggctgatc ttcttttcga tcgccgacaa aatttgcagc
     2281 catggattcg cggttgcgct aatggtcgct gtggataatg ccatcgcctt ggggtaactt
     2341 cctgtgccgg ggtagtgtcc cggaaaatgt gaaccgcgga cttcgatgct cttgggcgcg
     2401 aagagcagtt gaacacatcg ctgtgcaaca aaaatttaat gaactggagg gcatactagc
     2461 acatcgctac acctgtggaa gcccgtggaa aaactttttt ccgcaatgaa tcgcgcacgc
     2521 aaaaaacttt cttcgcagcg tgatgcgcga agcaaacttt tgcaacctgc aaggtgcaaa
     2581 caagcgagcg cttgctttgc gcgatacaaa atagttgtgc tcgcacgata actgtggcaa
     2641 tctttagcgc cgctcaggcg cgcaaaactc ctgcgaggca ggaacaaaat cttcgtgtct
     2701 gttgcggccc cgcactttag ggcgactctg gaaagaagtg cc
//
LOCUS       DASQYP010000364         3813 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_141608, whole genome shotgun sequence.
ACCESSION   DASQYP010000364 DASQYP010000000
VERSION     DASQYP010000364.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 3813)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3813)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3813
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_141608"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..442)
                     /locus_tag="VE783_11940"
     CDS             complement(<1..442)
                     /locus_tag="VE783_11940"
                     /inference="COORDINATES: protein motif:HMM:NF025221.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4197 domain-containing protein"
                     /protein_id="HYX54155.1"
                     /translation="MKRLIVLVPVLLLTTSLHAQSPLDEIRKRIEEATANRNGNLSND
                     KLVAGLKEALRVGTGNAVAETGRPDGFLKNAAIKILLPEKLRTVGKGMRMVGMGSQVD
                     ALEVGMNRAAEQAAPKAKAIFLDSLTRMTFSDARQIFTGGDTAAT"
     gene            complement(474..1085)
                     /locus_tag="VE783_11945"
     CDS             complement(474..1085)
                     /locus_tag="VE783_11945"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX54156.1"
                     /translation="MVEGLRVERPLIKFRIVLPMAALLLVTASCYRYYHALPAALRGT
                     AVSSSASMSVHPMTVAQAVNLPAAVVALPLEVAIVGTRPRTIPVLEFVRIMEFSLIGM
                     FFWFFMGRFVDDAIEWKQLRSGSRWRLSDCIVAALTAANSTLGVIAFATGQGRGRAGL
                     WLLLSSGLWALLGFSALVFRIMQIRAYPRTQAPGAPGDSNEGS"
     gene            complement(1174..2205)
                     /locus_tag="VE783_11950"
     CDS             complement(1174..2205)
                     /locus_tag="VE783_11950"
                     /inference="COORDINATES: protein motif:HMM:NF013530.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HYX54157.1"
                     /translation="MKILLIGGNGFIGRPTAAALLKQDHQVSVFHRGNTPAPEGTSEI
                     IGDHSSLPSHRSDFERERFDVVVDFILSSEPQAKLLMDIFRGITARVVGLSSMDVYRA
                     WGIFYGFESGELQKLPVTEDSDLRTSRNVYPPAALARVRNIYGWIDDEYDKIPVEQTV
                     LGDPLLPGTVIRLPMVYGPGDPVHRFHPVLKRINDGRRQIIFADDLAPMRTPRGYVED
                     MGYAIALAATLPQAAGRIYNVCESDSFGELDWGRKIAAAVNWNGEFIVLPHDQTPKHL
                     LSPGNPAQHLTASSERIRKELGYREQVPREEAIRRTIQWERSHVPAAELYPFDYPAED
                     AALKQAQTA"
     gene            complement(2249..2458)
                     /locus_tag="VE783_11955"
     CDS             complement(2249..2458)
                     /locus_tag="VE783_11955"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX54158.1"
                     /translation="MAKWKQYELWVQSGENKWDMVGVFPTPELPTAVANTRASRARLI
                     EVLYDGSKLLGQEVIAELGSSRREP"
     gene            complement(2535..>3813)
                     /locus_tag="VE783_11960"
     CDS             complement(2535..>3813)
                     /locus_tag="VE783_11960"
                     /inference="COORDINATES: protein motif:HMM:NF013560.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008237 - metallopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008241 - peptidyl-dipeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="M2 family metallopeptidase"
                     /protein_id="HYX54159.1"
                     /translation="MVELSNKGAQEIGFQDTGVLWRSNYDMPPEQFSAELERLWKQVE
                     PLYISLHTYVRKQLIKKYGKVAERPDGLIPAQLLGNMWAQEWGNIYPIVAPANSGQGY
                     DLTELLKSHKVDELGMVHYGENFFKSLGFAPLPETFWERSLFLKPKDRDVVCHASAWD
                     IDNKDDLRLKMCIEVRDEDFVTIHHELGHNFYQRAYKSQPPLFEDSANDGFHEAVGDT
                     IALSVTPEYLKEVGLLDAVPPESSDMGYLLKMALDKVAFLPFGLLIDKWRWDVFSGKV
                     TPEQYNKFWWELKAKYQGVAPPVERSEADFDPGAKYHIASNTPYARYFLARILQFQFQ
                     RALCQAAGEKGPLHRCSIYKNKAAGERLNQMLSMGKSKPWPEELKAISGQTQMDATAM
                     LDYFAPLKKWLDEQNQGEKPGWQGMEAPAQSGH"
BASE COUNT          772 a         1136 c         1114 g          791 t
ORIGIN      
        1 cagtggccgc ggtgtcaccg ccggtgaaga tctggcgcgc atcactgaag gtcatgcggg
       61 tgagcgagtc caggaaaata gccttggctt tgggagcagc ctgttcggcg gcgcggttca
      121 tgccaacttc gagcgcgtca acctgagagc ccatgccgac catgcgcatg cctttgccca
      181 ccgtgcgcag cttttccggc agaaggatct tgatggcggc attcttcagg aagccatcgg
      241 gacgccccgt ttcagcaaca gcgtttcccg ttcccacgcg cagggcctct ttcaagccag
      301 ccacaagctt gtcattgctg aggttgccgt ttctgttggc agtggcttct tcgatccttt
      361 tccgaatctc gtccagaggt gattgagcgt ggagtgaagt ggtcaggagc agaaccggaa
      421 ccaacacgat caggcgcttc atgccgatat cttaaccaac ccgggcagga aagctaggaa
      481 ccttcgttgc tgtccccggg agcgccagga gcctgcgtgc ggggataagc gcgaatctgc
      541 atgattcgaa atacgagagc ggaaaatccc agcagcgccc acaacccgga gctcagcagc
      601 agccagagtc ccgctcgccc acggccctgt ccggttgcaa aggcgatgac tcccagtgtg
      661 ctgtttgcgg cggtgagcgc tgcaacgatg caatcactca ggcgccagcg ggagccgctg
      721 cgcagctgct tccactcgat tgcatcatcc acaaatcgcc ccatgaagaa ccagaagaac
      781 ataccgatca ggctgaattc catgatgcga acgaactcca ggaccggaat ggtccgcggt
      841 cgcgttccca caatggcgac ctccagaggc agtgcgacaa ctgcggccgg caggtttaca
      901 gcttgcgcca cggtcatggg atgaacgctc atactggccg aggaagagac tgcagtgccg
      961 cgaagagccg caggcaaggc atggtagtag cggtagcacg aagccgttac cagcagaagt
     1021 gcagccatgg gcagaacgat tcggaacttg atgagaggac gctcgacccg aagaccttca
     1081 accattttga ccgtcgcccg cgtggatgcc cgtcacggcg ctgagcttaa accatcgaaa
     1141 cgtctgtggc aattcgcgga gacagaatcg ccgtcaggct gtttgtgcct gcttcaaggc
     1201 tgcgtcctct gccggatagt cgaatggata gagctctgcg gcaggaacat gagagcgctc
     1261 ccattgtatt gtccgccgga tggcctcttc acgcggcacc tgctcgcgat agcccagctc
     1321 tttgcgaatc cgttcggatg atgctgtgag atgctgcgcc ggattgccgg gtgataacag
     1381 gtgcttcgga gtttgatcgt gtgggagtac tataaactct ccattccagt tcaccgcggc
     1441 agcaatcttt cgtccccagt caagttcgcc gaacgagtct gactcacata cgttgtagat
     1501 tcggccagca gcctggggca gcgttgccgc cagcgcgatc gcatagccca tatcctcaac
     1561 atagccccgc ggggtgcgca taggagccag atcgtcagcg aagataatct gcctccggcc
     1621 gtcattgatt cgcttgagca cagggtgaaa ccggtgcacg ggatcaccgg gaccgtaaac
     1681 catgggaaga cgaataacag tgccgggcag cagcggatcg ccgaggacgg tttgttccac
     1741 cggaatcttg tcatactcgt cgtcaatcca cccatagatg ttgcgaacgc gcgccaatgc
     1801 ggccggtgga tagacgtttc gactggttcg gagatcggaa tcctcggtca ccggcagctt
     1861 ctgcagttcg ccgctctcga atccgtagaa gatcccccag gctcggtaaa cgtccatgct
     1921 actcaggccc acaacgcgcg ctgtgatgcc gcggaagatg tccatcagca gcttggcttg
     1981 gggttcggag ctgaggatga aatccaccac cacatcgaac cgctcccgct cgaaatcaga
     2041 acgatgcgac ggcagagaac tgtggtcgcc gatgatctca gatgtgcctt ccggcgcagg
     2101 cgtattgccg cgatgaaaga ctgagacctg atgatcttgt ttgaggaggg ccgctgcagt
     2161 tggccggccg atgaagccgt tgccgccgat gaggagtatc ttcatgcact tgcctgctgc
     2221 tcgcgtggag caatgagcgg ttcttgtatc agggctcgcg gcgcgaggat cccagctctg
     2281 cgatcacttc ctggcccaga agcttgctgc catcataaag cacttcaatg aggcgggccc
     2341 gcgaagcacg cgtgttggcc accgcagtgg gcagctctgg cgtagggaac actccaacca
     2401 tgtcccactt gttttcacca ctctggaccc agagttcgta ttgtttccac ttggccatgc
     2461 gcgctaaatc aatcttagct gggatgcagg tggaactgca tccacctgca cccagcttgc
     2521 aaatatccgg aaggtcagtg gccggattgc gcaggcgctt ccatgccctg ccagcccggc
     2581 ttctcaccct ggttctgctc gtcgagccac tttttgaggg gcgcaaagta gtccagcatg
     2641 gcagtggcat ccatttgggt ttggccgctg atggccttca gctcttccgg ccatggcttg
     2701 ctcttgccca tgctcagcat ctggttcagc ctctcgcccg ctgctttgtt cttgtagatg
     2761 gagcaacggt gcagcggtcc cttttctccc gctgcctggc acagcgcacg ctggaactgg
     2821 aactgaagaa tccgcgccag gaagtagcgc gcgtaggggg tgttggaagc gatgtggtac
     2881 tttgccccgg gatcaaagtc agcctcgctg cgctccaccg gcggcgccac gccctgatac
     2941 ttcgctttca gctcccacca gaacttattg tattgctccg gtgtgacttt gccggaaaac
     3001 acgtcccagc gccatttgtc gatgagcagg ccaaatggca gaaacgcgac tttatccagc
     3061 gccatcttga gcaggtagcc catgtcagag ctttccggag gcaccgcatc cagcagcccc
     3121 acttccttca ggtattccgg cgtgacggaa agcgcaatcg tatcacccac ggcctcatgg
     3181 aagccgtcat tcgcgctgtc ctcaaacagc ggcggttggc tcttgtaggc ccgctggtaa
     3241 aagttgtgac cgagctcgtg atggatggtg acgaaatctt cgtcgcggac ctcaatgcac
     3301 atcttgagcc gcagatcgtc tttattgtcg atgtcccagg cgctggcgtg gcagaccacg
     3361 tcacgatcct tgggcttgag aaagagcgag cgctcccaga aggtctctgg aagcggcgca
     3421 aagcccagcg acttgaagaa gttctcgccg tagtggacca tgccgagctc gtcgacttta
     3481 tgcgacttca gcagctcggt gaggtcatag ccctggccgg agttcgcggg cgcgacgatg
     3541 ggatagatat tgccccactc ctgagcccac atgttgccca gcagctgcgc gggaatcagg
     3601 ccatcggggc gctccgcgac tttgccgtat ttcttgatca gctgtttgcg aacgtacgta
     3661 tgaagcgaga tgtagagcgg ctcaacctgc ttccacagcc gctccagttc ggcgctgaac
     3721 tgctccggcg gcatgtcgta gttcgaccgc cacagcacgc ccgtgtcctg gaacccgatc
     3781 tcctgcgcgc ccttgttgga aagctccacc atg
//
LOCUS       DASQYP010000365         3164 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_17600, whole genome shotgun sequence.
ACCESSION   DASQYP010000365 DASQYP010000000
VERSION     DASQYP010000365.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 3164)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3164)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3164
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_17600"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            79..1719
                     /locus_tag="VE783_11965"
     CDS             79..1719
                     /locus_tag="VE783_11965"
                     /inference="COORDINATES: protein motif:HMM:NF024883.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GAF domain-containing sensor histidine kinase"
                     /protein_id="HYX54160.1"
                     /translation="MTAVPPFKESSRELIVEVARALEPYFPDITNHWRDRLVAEFGFD
                     GRTLAALERLTLAAGCSYFIHNDFPGFQENLQYFGTRLSKLQVDTRAVARSLELYSLS
                     CDPYLSGLFPDREAEAKAALEMLSSVSFVIISGAYFDAQTLESQTLLAVLDAELAAGD
                     LKALLQKVLEITTQTFQASVGAMMLRDGDNDHLKLCSEFGLGQRVPENFQITIGKGFS
                     GNIAASGEPGMILDTSVDHGDFTPIIRSQAKSLWGVPLKADGITIGVLVIGFPKPYEW
                     LPTERELLRAIGDRAALAIERARMTEALREREQRIAELSAHLLRVQEEERKRISRELH
                     DETGQALMVIRLYLGMMESGVTQKSVRGKIKETVEVVDRTIEGIRRIIGKLSPLVLQE
                     LGLVAAIRKEAKDLAKSTGVKARVLIADDVGRLAPGTEQAIYRVVQEALHNISKHAKA
                     QNVTVQVEREEKQVHVLVEDDGIGIQGQGRANSRERQTFGLAGMKERIAMLGGVSRVI
                     STKGKGTRIEITVPAGEPASPVERPPQRAAMHAGVRPN"
     gene            1740..2405
                     /locus_tag="VE783_11970"
     CDS             1740..2405
                     /locus_tag="VE783_11970"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HYX54161.1"
                     /translation="MPKIKCLLVDDHTLFRQGVRRLLESESDFEVTGESPDGGDAVEK
                     ARELRPDIVLMDIGMPGLSSFESARQIKKMRPETKILFLTMYEDEDYLVQCLEVGASG
                     YVLKDTPAPQLLSAVRDVYKGGKYLSSQVLGKLVEDFRSRVRDTRMRPRISTLTPRER
                     EILKLLAEGNSVKEIAVILGLSVKTVEAHKFNLMRKLDIHNKAQLVTYAIQKKIIKIP
                     VNQ"
     gene            2522..3151
                     /locus_tag="VE783_11975"
     CDS             2522..3151
                     /locus_tag="VE783_11975"
                     /inference="COORDINATES: protein motif:HMM:NF025729.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4412 domain-containing protein"
                     /protein_id="HYX54162.1"
                     /translation="MKHRVTALLSLLFTIAISAFGFQAPQPFSADFTSTTSDGKPMAK
                     GKLYASGYKFRVDMNEMNNQRGPMGGTGNVIVDSKTNTSYLLMPQMQMYMEYHSNENS
                     PAFRQIPRIEATGDPCAGRQGYNCKRVGSENLNRRSCTKWEVTDNNGKKGTAWMDDKL
                     HLPIKMQDADRTWVVSNIKEGAQPESLFEVPAGYRKFDAAAMGGQRPKK"
BASE COUNT          739 a          849 c          974 g          602 t
ORIGIN      
        1 cttagggttt gttgaacgct gcagggatga gcagtaggaa aagccgcctc gtcaagctct
       61 ggaatccggg aagtgccagt gacagccgta ccaccgttta aggaatcgtc gcgagaactg
      121 attgttgaag tggcccgagc cttggagcca tatttcccag atatcacgaa tcactggcgc
      181 gaccgcctgg tggcggagtt tggtttcgat ggacgcacgc tggcggcgct ggagcgcctg
      241 acgctggctg cgggatgcag ctacttcata cataacgatt ttcctggctt ccaggaaaac
      301 ctgcaatatt ttgggacccg actttccaaa cttcaggtgg acacgcgcgc ggtggcgcgc
      361 tccctggagc tctattcgct ctcctgcgat ccgtatctga gcggactatt tcctgatcgt
      421 gaagcggaag ccaaggctgc gctggaaatg ctctcttccg tttctttcgt catcatctcc
      481 ggtgcgtact ttgacgcgca gacgctggaa tcgcagactt tgctggccgt gctggacgcg
      541 gagctggcgg caggcgactt gaaagcgctg ctgcaaaaag tattggagat caccacccag
      601 acttttcagg cctcagtggg cgccatgatg ctgcgcgatg gagacaatga ccacctgaag
      661 ctgtgttctg aatttggcct ggggcaacgg gtgccggaaa acttccagat cacgattggc
      721 aagggattct ccggcaacat tgcagcgagt ggtgagccgg gaatgatcct ggacaccagc
      781 gtggaccatg gcgacttcac tcccatcatc cgcagccagg caaaatcctt gtggggagtg
      841 ccgctgaagg cggacggaat tacgattggc gtgctggtca taggcttccc caagccctat
      901 gaatggcttc caacagaacg tgagttgctg cgggccattg gagatcgggc ggcgctggcg
      961 attgagcgcg cgcgcatgac cgaagcgctg cgggagcggg aacagcgtat tgcggaattg
     1021 tcagcacatt tgttgcgcgt gcaggaagaa gagcggaagc gcatcagtcg cgaactgcac
     1081 gacgagaccg gccaggcgct gatggtgatc cggctgtacc tgggcatgat ggaatccggc
     1141 gtgacccaga agagcgtgcg cggcaagatc aaagaaacgg tggaagtggt ggaccgcacg
     1201 attgaaggaa tccgcaggat tattggcaag ctttcaccgc tggtgctaca agaacttggg
     1261 ctggtggctg cgattcgcaa agaagccaaa gacctggcaa aatccaccgg cgtgaaggcc
     1321 agagtgctca tcgccgacga tgtaggacgg ctggcgccgg gaacggaaca ggctatctat
     1381 cgcgtggtgc aggaggcgct gcataacatt tcgaagcacg ccaaggcgca gaacgtcacg
     1441 gtgcaggtgg aacgcgaaga gaagcaggtc cacgtgctgg tggaggacga tggaatcgga
     1501 atccagggcc agggccgcgc gaattcgcgg gaacggcaga cgtttggtct ggccggaatg
     1561 aaagaacgga ttgcaatgct gggcggggtc tcgcgcgtga tctcgaccaa gggaaaggga
     1621 acgcgcattg agattacagt gcccgcaggc gagccggctt cgccagtgga gcggccgccg
     1681 cagagggcgg caatgcatgc cggtgtaaga ccgaattaaa acgctcgaga ggactcccca
     1741 tgccgaagat taaatgcttg ctcgtagatg accacacact atttcgccag ggcgtacgcc
     1801 gcctgctgga aagcgaaagc gacttcgaag tcacgggcga gtcgcccgac ggcggagatg
     1861 ccgtggaaaa ggcgcgggaa ctgcgtccgg acattgtgct gatggatatc ggcatgcccg
     1921 ggctgtcgtc atttgagtcg gcgcggcaga tcaagaagat gcgtccggag accaagatac
     1981 tgttcctcac gatgtatgag gatgaagact atttggtgca gtgtctggaa gtgggcgcgt
     2041 ccggctatgt gctgaaagat accccggccc cgcagttgct gagcgcggta cgcgacgtct
     2101 acaagggcgg caagtacctg agttcgcagg tgctcggaaa gctggtggag gacttcagaa
     2161 gcagggtgcg cgatacccgg atgcgtccgc gcatttccac gctcacgccc cgcgagaggg
     2221 agatcctgaa gcttctggcg gaaggcaact ccgtgaagga aatcgcggtg atcctcggcc
     2281 tcagcgtgaa aactgtggaa gcgcacaagt tcaacctcat gcgcaagctc gatattcaca
     2341 acaaagcaca gttagttacc tacgcgattc agaagaaaat cattaagatt cccgtcaacc
     2401 aatagctcct ctcgctagag aaaaaggggc gccccaacgg cgcccttttt tatttttcag
     2461 ccgcactggc tcggggtaag ctggcgtaca ccgttcattt ccgtgtaggg gaggtacttt
     2521 gatgaagcat cgggtcaccg cgctgctttc actgctcttt actatcgcca tctctgcatt
     2581 tggatttcag gctcctcaac ctttttccgc cgacttcacc agcaccacca gcgacggcaa
     2641 gcccatggct aaaggcaagc tctacgcctc cggttacaag tttcgcgtgg acatgaatga
     2701 aatgaacaac cagcgcgggc ccatgggcgg caccggcaac gtcatcgtcg actccaagac
     2761 caacaccagc tacttgctga tgcctcagat gcagatgtac atggaatatc actcgaatga
     2821 aaatagcccg gctttccgcc agattcccag gattgaagcc accggcgatc catgcgccgg
     2881 ccgtcagggt tacaactgca aacgcgtggg cagtgaaaac ctgaaccgcc gcagctgcac
     2941 aaaatgggaa gtgaccgata acaacggcaa aaaggggacc gcatggatgg acgacaaact
     3001 ccacctcccc atcaaaatgc aggacgccga ccgcacatgg gtggtttcca acatcaagga
     3061 aggcgcccag cctgaatcgc tgtttgaagt gccggctggt taccgcaaat tcgatgccgc
     3121 cgccatgggc gggcagcggc cgaagaagta aaaccatctg aacg
//
LOCUS       DASQYP010000366         3203 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_17623, whole genome shotgun sequence.
ACCESSION   DASQYP010000366 DASQYP010000000
VERSION     DASQYP010000366.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 3203)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3203)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3203
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_17623"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            221..1366
                     /gene="mqnE"
                     /locus_tag="VE783_11980"
     CDS             221..1366
                     /gene="mqnE"
                     /locus_tag="VE783_11980"
                     /inference="COORDINATES: protein motif:HMM:TIGR03700.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009234 - menaquinone biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminofutalosine synthase MqnE"
                     /protein_id="HYX54163.1"
                     /translation="MSQTVAPSRHQFQTDDPQLRPIAEKVTARERLTFDDAVALYRSP
                     DILAVGWLANQVRERMHGNVTYFNVNRHINPTNVCVAACRLCAFGRKKDVPGAYTMAL
                     QEAFDTAASGYSEAVTEFHIVGGLHPDLPFQYYLDLISGLKARFPQVHLKALTMVEIA
                     FLAKRGKLSIEETLRQLKAAGLDSLPGGGAEIFIDRVRRVICDHKIDGDQWLDTARTA
                     HKIGLKSNATMLYGHIENEEDRADHLLRLRNLQDETHGFQTFIPLAFHPANTPLSHLF
                     TTTGMSDIRQIAVGRLMLDNFPHIKAYWQMLGAKIAQIALRFGADDIDGTVVEEKIYH
                     DAGATTPQGLRRSELERLIREAGREPVERDTMYRPVTRTETSFSISV"
     gene            complement(1432..>3203)
                     /locus_tag="VE783_11985"
     CDS             complement(1432..>3203)
                     /locus_tag="VE783_11985"
                     /inference="COORDINATES: protein motif:HMM:NF012894.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="OmpA family protein"
                     /protein_id="HYX54164.1"
                     /translation="AVDYRDRGGTTQLDFRGTSLEPTVTGDAHVTGHTGRLLIDANLH
                     KLAPARSFGPEYLTYVLWAITPEGRATNLGEVIPNDNGNSRVQVTTGLQVFGMIVTAE
                     PYFSVARPSNLVVAENIPLPETMGGVHPITAKFDLLEKGQYTVNMTPAQLPATNMDKS
                     VPLQLQEAENAIAIAKAAGADHYAADTLGKAQAYLAQGQDYLRRKQGLTPIGAVARAA
                     TQSAEDARLLTLEKKQEEAAAAERQRAQDQIQQAQTQAEQASARATAARDEAQRQAEA
                     RALADQERQAAEQARLQAEQAAQQAAADRAAAQQQLQQAEQQRQSLEQQQQALTQQAE
                     QARLQAQQADQQRLQIQQQAEQQRQRLLTQLNQVLQTRDTARGLIVNMSDVLFDLNKA
                     TLRPGAKLRLAKVAGIILAYPDLKLEIDGFTDNTGSQQYNQTLSDKRAKTVADFLTSQ
                     GVSSDAVITRGFGPSNPVASNATASGRQMNRRVELVVSGTAIGTNVGPGRSGTPGTTS
                     VGTVGPDGRVQPGNAGAQGSVSTPAGSASGTVATPAATQPNGTVATPAGTTNVPSSPS
                     SSTPPANNPNSQPPSSGGVPPQM"
BASE COUNT          574 a          986 c          939 g          704 t
ORIGIN      
        1 cggctattcg gcgaagggga acttcacctt ctgccctcag tgtgggacgg aactccagcc
       61 cgcttgcccg aactgccgca aggcagtgga agcgggctgg aaaagctgcg cctattgcgg
      121 ctcagccctg caaccggtaa accagcgggt gtgagaagcc gtggggcggc ctttaagaaa
      181 gtgcaagcgc cccatcagat tcgatatcat tattaccagc atgtcccaga ctgtagcccc
      241 ctctcgccac cagtttcaga cggatgaccc gcagctccgc ccgatcgcgg agaaggtcac
      301 ggcccgcgag cgcctcacct tcgatgatgc cgtcgcgctc taccgctcgc cagacattct
      361 ggccgtcggc tggctggcga accaggtgcg cgagcgcatg cacggcaacg tgacctactt
      421 caatgtcaac cggcacatca atccgacgaa cgtctgcgtg gctgcctgcc ggctctgtgc
      481 ttttggccgt aagaaagatg tgcccggggc ttacaccatg gcgctgcagg aggcatttga
      541 cacagcagct tcgggatatt cagaggcggt caccgagttt cacattgtgg gcgggctgca
      601 tccggatctg cccttccagt actacctgga tctcatttcc ggcctgaagg cgcgcttccc
      661 gcaggtacat ctcaaagcat tgacgatggt tgagatcgcg tttctagcca agcgcggaaa
      721 attgagcatt gaagagacgc tgcggcagct caaagctgca gggctcgatt cactcccagg
      781 cggcggagct gaaatcttca ttgaccgcgt tcgccgcgtg atctgtgatc acaagattga
      841 cggcgatcag tggctggata ctgcgcgcac cgcgcacaag atcggactta agtcaaacgc
      901 caccatgttg tacggccaca tcgaaaacga agaagaccgt gctgaccacc tgctgcgtct
      961 gcgcaacctt caggatgaaa cgcacggctt ccagaccttc attccgctgg cctttcatcc
     1021 ggcgaacacg ccgctctcac atctgttcac cacgactggt atgagcgaca tccggcagat
     1081 cgccgttggc cgtttgatgc tggataattt tccccacatc aaagcctatt ggcagatgct
     1141 gggcgcgaag atcgcgcaga tcgcccttcg ctttggcgct gacgacattg acggcacggt
     1201 agtggaagag aagatttatc acgatgctgg cgccaccact ccacaagggc tgcgccgcag
     1261 cgaacttgag cgtcttatcc gggaagccgg tcgcgagccc gtggagcgcg acaccatgta
     1321 ccgcccggtt acccgaaccg aaacctcttt ttcgatttcg gtatagaaga tttaatactg
     1381 cacgaaaatg gggatgcttg accgcgtccc catttcctct tgtgctcaac atcacatctg
     1441 cggtggcact cctccgctcg aaggtggctg tgaattggga ttatttgcgg gcggagtact
     1501 tgaactcgga ctcgacggga cgttcgtggt tcccgctgga gtcgctaccg tcccatttgg
     1561 ctgagtcgcg gccggagttg ccacggttcc gcttgccgag ccggcaggag tggagacact
     1621 gccctgcgct cccgcgttcc cgggctgcac ccttccgtct ggtcccacgg tgcccaccga
     1681 agtagttccc ggcgttccag accgacccgg cccaacattg gttccgatcg cggtgccgct
     1741 caccaccaac tccacacgcc gattcatctg cctgccagat gctgtcgcgt ttgaagccac
     1801 aggatttgag gggccaaagc cgcgcgtaat gactgcgtct gaagagactc cctggctggt
     1861 cagaaaatcg gccaccgttt tggcgcgctt gtcagagagc gtctggttat attgctgaga
     1921 gcccgtgtta tcagtgaagc cgtcaatctc cagcttcagg tcaggatagg caagaatgat
     1981 gccagctacc ttggccagac gcaacttcgc gcccggccgc agcgtagctt tattgagatc
     2041 aaataaaacg tcagacatat tgacgatcag tccccgtgcc gtatcgcggg tctggagcac
     2101 ctggttgagc tgcgtgagca gtctctgccg ctgctgctca gcctgctgct gaatctggag
     2161 ccgctgttga tcagcctgct gggcctggag ccgcgcctgt tcggcctgtt gggtaagggc
     2221 ctgctgctgt tgttccaggc tctggcgctg ctgttccgcc tgttgcaatt gctgttgtgc
     2281 tgctgcacga tcggcggcgg cttgttgcgc cgcctgctct gcctgaagcc gcgcctgctc
     2341 ggccgcttgg cgttcctgat cggcgagagc gcgagcctca gcctgccgct gtgcttcgtc
     2401 gcgtgccgcc gtggcgcgcg ccgaggcttg ttccgcctgg gtctgcgcct gctggatctg
     2461 gtcctgcgcg cgctgccgtt ctgccgccgc cgcttcttcc tgtttctttt ccagcgttaa
     2521 gaggcgagca tcctcggccg attgtgttgc cgctcgcgcc accgctccga tcggagtgag
     2581 gccttgtttc cttcgtaagt aatcctgccc ctgagccaga taggcctggg ctttccccag
     2641 cgtgtcggct gcgtagtggt cagcgccggc ggccttagct atggcgattg cgttctccgc
     2701 ctcctgcaac tgcaagggaa cgcttttatc catgtttgtc gccggaagct gtgctggcgt
     2761 catgtttacc gtgtactgtc ctttctccag caaatcgaac ttcgcggtga tgggatggac
     2821 tcctcccatg gtttccggca gcggaatgtt ttctgccacc accagattgc tcggacgtgc
     2881 caccgagaaa taaggctcgg cggtcacaat catgccgaac acctgaagcc ccgttgtgac
     2941 ctgcacgcgc gagttgccat tatcgttggg gatcacctcg ccgaggttgg tggcgcgacc
     3001 ttccggtgtg atcgcccaca aaacataggt caggtattcc ggaccgaagc tgcgcgccgg
     3061 tgcgagcttg tgcaggttgg cgtcaatcag caaacggcca gtgtgcccgg tcacgtgtgc
     3121 gtcgccagtc acagtcggtt caagactagt gccccggaaa tcgagctgcg ttgtgccgcc
     3181 gcggtcgcgg taatcaacgg cct
//
LOCUS       DASQYP010000367         6736 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_293942, whole genome shotgun sequence.
ACCESSION   DASQYP010000367 DASQYP010000000
VERSION     DASQYP010000367.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 6736)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6736)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6736
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_293942"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..306
                     /locus_tag="VE783_11990"
     CDS             <1..306
                     /locus_tag="VE783_11990"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX54165.1"
                     /translation="GWHRDAPQFGTVIGISLASRCRMRFKPYVPPSKKAEANSGNHSR
                     PLSIILEPRSAYVIRGTARWRYQHSIPAVEQLRYSITFRTLRGKEDAAPEKAAYDAR"
     gene            369..584
                     /locus_tag="VE783_11995"
     CDS             369..584
                     /locus_tag="VE783_11995"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX54166.1"
                     /translation="MTSSWQIKDGHIACNWAGVMESRNYDSPWMRTSSEIEGSYLPPT
                     PDFANHSPFGGPYSFWFLPQQYRYPQR"
     gene            644..1657
                     /locus_tag="VE783_12000"
     CDS             644..1657
                     /locus_tag="VE783_12000"
                     /inference="COORDINATES: protein motif:HMM:NF024748.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase"
                     /protein_id="HYX54167.1"
                     /translation="MRYNPSPMYFKGLVAHLALMCLTAAAQTAPPKPLDLLKQRIQTI
                     GQGVSADWGIYIKSLDTGEEIAINADAPMDTMSTIKIPLLVDVYRQVDAGKLNPADRI
                     VMHTADKRFGTGVLRTLDDGLNLSFHDALMLMIIQSDNTGTDMAFSRAGGPAHVTQTM
                     HQMGFTSIVATGTTYDWFRALGAAGDPAWEKLSPEELFSKGFPQKLADADVERFHFEG
                     KHPFGLANARDMGRLLEMIATNKAASEKSCKEMLRLMGLQQMRSRIPKYMDDDTNTPH
                     KTGDFPPYIANDVGFIETPAGRVVVVFFSAHHRGFYSELEDAIGRMSEQVWAYFNYRG
                     KQK"
     gene            1797..3980
                     /locus_tag="VE783_12005"
     CDS             1797..3980
                     /locus_tag="VE783_12005"
                     /inference="COORDINATES: protein motif:HMM:NF023683.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX54168.1"
                     /translation="MRSTLTEKSSFLRRNLILLVVSALIPALASAATHPVFNLQSTSM
                     SPFPSDRFTVIDLAQNTNLRVNLPLPNCATNPSDCADITLLNQLDGFNLQPRLSIPFD
                     GAIDPNSVNSSNVFLAQIPAGFTGDGDQPVTPHIIGINQIVWDPASLTLFAESDQHLD
                     QRSTYLLIVTRGVRDAKGTAIEASHDFRDLNAGDSADARLRAYRQSLQALLDNGTLHR
                     LLPGLDRKDIAAASLFTTESSTATLESIRAQIKAAAAPLVNFNLGTGGEKTVFPVNTV
                     TGFTWNVQALTVGPLIPTSLNADLAALQVFPGSVKTLAFGKFTGQHWQNANVFIPQVP
                     TRQSVPSLGSEELFFNLFIPSGPRPTNGWPVAIFGHGFTDSKQGAPFAVASTLAHNGI
                     ATIAINVVGHGFGPNSTLTINQGATATTFLEGGRGFDQDGNGQITSAEGSSTFVLTPQ
                     ATIASRDALQQTVADLMQLVRAIEGGIDVDGDGLQDLDPNRIYYAGQSFGGIYGTMFL
                     GIEPDIRAGVPNVPGGPIIDIVRLSPNFQLLLTQALAVRTPQLLNAAGPIFFNDNSPL
                     RNLPPVTNNVPGAVAIQTVEDTSRWLGQSGDPVAWAPFIRKSPLPGDNAKPVIIQFAR
                     GDETVPNPTATALIRSGDLADRATFFRNDLAFALGVGFGKNPHTFLTNIGGTVPVATA
                     AIGAQTQIAIFFSTNGALTIDPDGPGPLFEVPIAGPLPEDLGFIP"
     gene            4183..5313
                     /gene="carA"
                     /locus_tag="VE783_12010"
     CDS             4183..5313
                     /gene="carA"
                     /locus_tag="VE783_12010"
                     /EC_number="6.3.5.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003280874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005951 - carbamoyl-phosphate synthase
                     complex [Evidence IEA];
                     GO_function: GO:0004088 - carbamoyl-phosphate synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_process: GO:0009220 - pyrimidine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine-hydrolyzing carbamoyl-phosphate
                     synthase small subunit"
                     /protein_id="HYX54169.1"
                     /translation="MQAILALEDGRIFSGRGHGAKGECYGEVVFNTSLTGYQEIFTDP
                     SYAGQIVVLTNPEIGNYGTNPEDNESTHPYIEGLVVREFSPISSNWRSQQVTDEYLEK
                     FKIPVISDIDSRALVRHLRTHGVMRGVISSIETDPEKLVAKARSIRKMDGTDLARVVT
                     TKQRYEWDTGTRSMEPAEAVAAPPQPTRHVVAYDYGIKQNILRMLVDEGCRVTVVPAI
                     TSAEDVLALKPDGVFLSNGPGDPEPCNYAYENIRRLMGKTPIFGICLGHQLVGLALHG
                     RTYKLKFGHHGGNHPVKQLESGKIEITAHNHNFAVDPDSLKESEVVKTHIDLNDNTLE
                     GLRHRSLPLFSVQYHPEASPGPHDSHYLFKDFVKMMEEWKGR"
     gene            5314..>6736
                     /gene="carB"
                     /locus_tag="VE783_12015"
     CDS             5314..>6736
                     /gene="carB"
                     /locus_tag="VE783_12015"
                     /EC_number="6.3.5.5"
                     /inference="COORDINATES: protein motif:HMM:NF003671.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006807 - nitrogen compound metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbamoyl-phosphate synthase large subunit"
                     /protein_id="HYX54170.1"
                     /translation="MPRRNDISKVLIIGSGPIVIGQSAEFDYSGTQACKALKAEGYEV
                     VLVNSNPATIMTDPEMADRTYIEPLSRTYLEEVIRLEAEMMEGQPGKFALLPTVGGQT
                     ALNLAVELSDSGVLDKYNVELIGAQLKAIKKAEDRLLFKDAMARIGLEVPRSALISGR
                     METAAGGTMQEGISTTRAQDIQFAMDFTEKVGFPLIIRPSFTLGGSGGGIAYNREEFL
                     ELLNRGISLSPVHEVLIEESVLGWKEYELEVMRDIADNVIIICSIENFDPMGVHTGDS
                     ITVAPAQTLSDREYQHMRDAAIRVIREIGVETGGSNIQFAVNPQNGRMVVIEMNPRVS
                     RSSALASKATGFPIAKIAARLAVGYTLDEIPNDITRKTPACFEPTIDYVVAKIPKWQF
                     EKFPGTDESLGPQMKSVGEAMAIGRTFKEALMKGIRSLETGKRVGSEKIEPRILTKRL
                     VTPHPERLQYIRYALAQGMTVREI"
BASE COUNT         1433 a         2121 c         1822 g         1360 t
ORIGIN      
        1 ggctggcacc gcgacgcacc gcagttcggc acagttatcg gcatatcact cgcgagcaga
       61 tgccggatgc gcttcaaacc atacgtccca cccagcaaaa aagcagaagc caactccggc
      121 aaccactcac gtcccctctc catcatcctt gagccgcgct ctgcctatgt gattcgcggc
      181 acagcacgct ggcgctatca acacagcatt cctgcggtgg aacagctgcg ttattcgatc
      241 accttccgga cccttcgagg aaaagaagac gcggcgcctg agaaggctgc gtatgatgct
      301 cgctgagagt actgtctgga gctagaatag aggtgtagac ggccaccata atttctggag
      361 gagcgagaat gacgtcatcg tggcaaatta aggacggaca catcgcttgc aactgggctg
      421 gcgtgatgga atctcgtaat tacgattcgc cgtggatgcg aacgagttca gaaattgagg
      481 gcagctattt gcctcccaca ccggattttg ccaaccacag cccgtttggc gggccttatt
      541 cgttctggtt cctgccccaa caatatcgct atcctcagcg gtgagctctc ggatctatct
      601 cgttaatgcc cgctgtgaag cagcggcgtg agctaaaaga gatttgcgtt acaatccctc
      661 tcccatgtat ttcaaaggcc ttgttgccca tctcgctttg atgtgcctca ccgctgctgc
      721 ccaaaccgcc ccgcccaaac ctctcgattt gctgaagcag cgcatccaga ccatcggtca
      781 aggcgttagc gctgactggg gcatctacat caaatcgctg gacacaggcg aggaaatcgc
      841 aatcaatgct gacgcgccca tggacacgat gagcaccatc aagattcccc tgctcgttga
      901 tgtgtatcgc caggtggatg caggcaagct caacccggcg gaccgcatcg tgatgcacac
      961 cgcggacaag cgcttcggca ccggcgtcct gcgcacgctc gatgatggcc tgaatctgag
     1021 ctttcatgac gcgctcatgc tcatgatcat ccagagcgac aacaccggca cggacatggc
     1081 tttctcgcga gccggcggcc cagcgcacgt cacgcaaacc atgcatcaga tgggatttac
     1141 ttccatcgta gccacgggaa ccacttatga ctggttccgc gcgctcgggg ctgctggcga
     1201 tcctgcatgg gaaaaactct cgccggaaga gcttttcagc aaaggcttcc ctcaaaagct
     1261 cgcggatgcg gacgtggagc gcttccattt tgaaggcaag catcccttcg gccttgctaa
     1321 tgcccgcgac atgggccggc tcctggaaat gatagccacc aacaaggcag ccagcgagaa
     1381 gtcctgcaaa gagatgcttc gcctcatggg ccttcagcag atgcgtagcc gcatccccaa
     1441 gtacatggac gacgacacca acacgccgca caaaacaggc gatttccctc cctacatcgc
     1501 caacgacgtt ggcttcatcg aaacgcccgc cggacgggtg gtggtggtct tcttctccgc
     1561 ccaccatcgc ggcttctatt cagaactgga agacgccatc ggccgcatga gcgaacaggt
     1621 ctgggcttat ttcaactatc gagggaagca gaagtaggcc atcgcacccc atgcaatttt
     1681 ttgcgtattt ggctgaaaat gtttcaaaac gcttccctta tcatttgaca attccgtaca
     1741 gacgggacta ctgtttccgg cggctccctt tcactcccct cggaggcttc ttgcctatgc
     1801 gttcgaccct cactgaaaaa tcttcatttt tgcgccgtaa cctaatcctg ctggttgttt
     1861 cagcacttat tccagcgctg gcttcggcgg cgacgcatcc ggtgttcaat ctgcaatcca
     1921 cctcaatgtc gccttttccc agtgaccgat ttacagtcat tgatctcgcg cagaacacaa
     1981 atctgcgggt gaacctgccc ttgccgaact gcgccacaaa cccatcggac tgtgcagaca
     2041 tcactcttct gaatcagctg gacggcttca accttcagcc gcgcctctcc atcccattcg
     2101 atggagcgat tgacccgaac agcgttaaca gcagcaacgt ctttctggcg caaattccgg
     2161 cgggcttcac cggtgatgga gaccagcccg taacgcccca cataattgga atcaaccaga
     2221 tcgtctggga tccggcttca ctcacgttgt ttgccgagtc tgaccagcac ctggaccagc
     2281 gctccaccta tctcctgatc gtcacccggg gtgtgcggga cgcgaagggc accgccattg
     2341 aggcctccca cgacttccgc gatttaaacg ccggcgacag cgcggatgcc cggctgcgcg
     2401 cgtatcgcca gagcctgcag gccctgctcg ataacggcac cctgcatcgc ctgctgccgg
     2461 ggctggaccg gaaagacatt gccgctgcca gccttttcac caccgaaagc tccactgcca
     2521 cgctggagag catccgggcg caaatcaaag ctgccgcggc gcccctggtg aatttcaacc
     2581 tgggtactgg cggtgagaag accgttttcc cggtcaacac tgttaccggc tttacctgga
     2641 acgtacaggc tcttacagtc ggtccgctta ttcctaccag tctgaatgcc gacctcgcag
     2701 ccttgcaggt cttccccggc tcggtgaaga ccctggcttt tggcaaattc accggccagc
     2761 actggcagaa cgccaacgtc ttcatcccac aagttcccac ccggcagagt gtcccgtcgt
     2821 tgggcagtga agaactgttc ttcaatctct tcattccttc aggaccacgt cccacgaacg
     2881 gatggccggt ggcgatcttc ggtcacgggt tcactgacag taagcagggt gcaccgtttg
     2941 cggtagcctc cactctcgcg cataacggca ttgccaccat cgcgatcaat gtggtgggac
     3001 acggctttgg tcccaatagc accctcacga tcaatcaggg cgccactgca accaccttcc
     3061 tggagggcgg ccgcggattt gatcaggacg gcaacggcca gatcaccagc gcagaaggct
     3121 cttccacgtt cgtcctgacg ccgcaggcca ctatcgcctc gcgcgacgca ctgcagcaga
     3181 cggtggcgga tctgatgcag cttgtccggg cgattgaagg cggcatcgat gtggatggcg
     3241 atgggctcca ggacttggat cccaaccgca tctactatgc tggccagtcg ttcggcggca
     3301 tctacgggac catgttcctc gggatcgagc cagacattcg tgcgggcgtt cccaacgttc
     3361 ccggagggcc gatcatcgac atcgtgcggc tgagcccgaa cttccagctt ctgctcacgc
     3421 aggctctggc ggtgcgcacc ccgcagctcc tgaatgctgc cgggccgatc ttcttcaacg
     3481 acaacagccc tctccgtaat ctgccgccgg tcacaaataa tgtgccggga gcggttgcca
     3541 ttcagacggt ggaagacaca agccgctggc tgggtcagtc cggggatccg gttgcctggg
     3601 ctccattcat tcgtaaatca cctctgcccg gcgataacgc caagccggtg atcatccagt
     3661 tcgcccgcgg tgatgagacc gtgcccaacc caacggccac ggcgctgatc cgttccggcg
     3721 acctggcgga tcgggcaacg ttcttccgca atgatctggc ttttgcgctg ggggtaggct
     3781 tcggcaagaa cccgcatacg ttcctcacga acattggcgg gacggtgccg gttgccacag
     3841 ccgccattgg agctcagacg cagattgcta tcttctttag cacgaatggt gccctgacca
     3901 ttgatcccga cggacctggg cctctgtttg aggttccgat cgctggcccg ctgccggagg
     3961 atctcgggtt cattccttag aaatcacgct tcacactctc gcattgggta acctggcatg
     4021 ctcaggttac ccagcttttt tgctcttcag gaacacgcta tcgatcttct ctgctgtgaa
     4081 acgcgagagc ggccctgaat ttcttccgcg ttatccacag gacccgcccg gagcgcaatc
     4141 ccgctctgat aaaattaata aaatccaccc ccgggagatc caatgcaggc aatccttgcg
     4201 ctggaagatg gacgaatctt cagcggcaga ggccacggcg cgaaaggcga atgttacggc
     4261 gaagtagttt ttaatacctc tctcactggc taccaggaaa ttttcacaga tccgtcttac
     4321 gccgggcaga tcgtcgtcct taccaaccct gagatcggaa actacggaac aaaccctgaa
     4381 gacaacgagt ccacacatcc ctacattgaa ggcttggtcg tccgcgagtt ttcgcctatc
     4441 agctccaact ggcgctcgca gcaggtcact gacgagtacc tggaaaagtt caaaattccc
     4501 gttatctctg acatcgacag ccgcgcgctg gttcgccatc tgcgtactca tggcgtgatg
     4561 cgcggcgtga tttcctcgat tgagaccgat ccagaaaagc tcgtcgccaa agcgcgctcc
     4621 attcgcaaaa tggacggtac cgatctggcc cgcgtcgtga ccactaagca gcgctatgaa
     4681 tgggacactg gtacacgctc catggagccg gcagaagcag tggccgcgcc gccgcagccc
     4741 acccgccacg ttgtcgccta cgactacggc atcaagcaga acatcctccg catgctggtg
     4801 gatgaaggct gccgcgtcac tgtggtcccg gccatcacgt ctgccgaaga cgtactcgcg
     4861 ctgaagccgg acggcgtgtt tctctccaac ggccctggcg atcccgagcc ctgcaactac
     4921 gcgtatgaaa atattcgccg gctcatgggc aagacgccga tttttggcat ctgcctgggc
     4981 caccaactgg ttgggctggc gctgcacggc cgcacgtata agctcaagtt cggccaccac
     5041 ggcggtaatc atccggtgaa gcagctggag tcaggcaaga tagaaatcac cgcccataac
     5101 cacaacttcg ccgtggatcc tgattcgctg aaggaatcag aggtcgtcaa gacgcatatc
     5161 gacctgaatg acaatacgct ggaagggctg cgccaccgct cgctgccact cttcagcgtg
     5221 cagtaccacc ctgaagcgtc gccgggcccg cacgattcgc attacctgtt caaggatttc
     5281 gtgaagatga tggaagagtg gaagggacga tagatgccac gtcgcaatga catctcgaaa
     5341 gtcctgatca tcggctccgg gccgattgtg attggccagt ccgccgagtt cgactactcc
     5401 ggcacgcagg cctgcaaggc gctcaaggcc gaaggttatg aagtggtgct ggtgaactcc
     5461 aaccccgcca ccatcatgac cgatcctgag atggcggacc gcacctacat tgagccgctg
     5521 agccggacgt accttgaaga agtcatccgc ctggaagccg agatgatgga gggccagccg
     5581 ggcaagtttg ctttgctgcc cacggtcggc ggccagaccg cgttgaacct tgccgtggaa
     5641 ctttctgatt ccggcgtgct cgataagtac aacgtcgaac ttatcggcgc ccagctcaag
     5701 gcgatcaaga aagccgaaga ccggctactc ttcaaagatg ccatggcccg tattggcctg
     5761 gaagtcccgc gctccgccct catctccggc cgcatggaga ccgccgccgg cggcaccatg
     5821 caggaaggca tctccaccac ccgcgcgcag gatatccagt tcgccatgga ctttaccgag
     5881 aaggtcggct tcccgctgat catccggccc tcgttcacgc tgggcggcag cggcggcgga
     5941 atcgcctata accgcgagga atttcttgaa ctcctgaatc ggggcatcag cctttctccg
     6001 gtgcatgaag tcctgatcga agaatccgtc ctcggctgga aggaatacga gctggaggtg
     6061 atgcgggaca tcgccgacaa cgtcatcatc atctgctcga ttgaaaattt cgatcccatg
     6121 ggcgtacaca ccggcgactc gatcaccgtg gccccggccc agacgctttc tgatcgcgaa
     6181 taccagcaca tgcgcgacgc cgcaatccgc gtgatccgcg agattggggt ggagaccggc
     6241 ggctccaaca tccagtttgc ggtgaacccg cagaacggcc gcatggtggt gattgagatg
     6301 aacccgcgcg tctcgcgttc gtcggcgctg gcatcaaagg caaccggatt tccgatcgcc
     6361 aaaatcgccg cacggctggc agtcggctac acgctggatg aaatccccaa cgacatcacg
     6421 cgcaagaccc cggcctgctt cgagccgacg atcgattacg tggtggcgaa aatccccaag
     6481 tggcagtttg agaagttccc cggcactgat gaatccctcg gcccacagat gaagtcggtc
     6541 ggcgaagcca tggcgatcgg ccgaaccttc aaggaagcgc tgatgaaggg gattcgctcg
     6601 ctcgaaaccg gcaagcgtgt cggctccgag aagatcgagc cccgcatcct caccaagcgt
     6661 ctggtcacgc cccatcccga acgcctgcag tacatccgct acgcactcgc gcagggcatg
     6721 acggtccgcg agatcg
//
LOCUS       DASQYP010000368         6110 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_125970, whole genome shotgun sequence.
ACCESSION   DASQYP010000368 DASQYP010000000
VERSION     DASQYP010000368.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 6110)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6110)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6110
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_125970"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            211..465
                     /gene="secE"
                     /locus_tag="VE783_12020"
     CDS             211..465
                     /gene="secE"
                     /locus_tag="VE783_12020"
                     /inference="COORDINATES: protein motif:HMM:TIGR00964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015450 - protein-transporting ATPase
                     activity [Evidence IEA];
                     GO_process: GO:0043952 - protein transport by the Sec
                     complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecE"
                     /protein_id="HYX54171.1"
                     /translation="MAKATAIMRDEQTMGGKLAQFPAKTKAFLADVRNEMRKVSFPSR
                     KEVQATTVVVIITVVIFGVYFFVIDQGIGTAVNWVLHHLK"
     gene            490..1128
                     /gene="nusG"
                     /locus_tag="VE783_12025"
     CDS             490..1128
                     /gene="nusG"
                     /locus_tag="VE783_12025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002640701.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006353 - DNA-templated transcription
                     termination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination/antitermination
                     protein NusG"
                     /protein_id="HYX54172.1"
                     /translation="MEEQNTTGAAENLPEGQPIPPAEEITNPNMKWYIIHSYSGFERK
                     VKESLESRIKAFGLENKIGKVVIPTEPVTEIRNGKKYTVERMFYPGYVLVQMDLTGFR
                     TGGEGDHVWHVVKSTPRVTGFVGTANDPTPLSEDEVNQIVYRVNVGKDKPRIKVKFEK
                     NETVRITDGPFANFNGIVDDVNEDRETLKVMVTIFGRATPVELEFGQVEKVA"
     gene            1300..1734
                     /gene="rplK"
                     /locus_tag="VE783_12030"
     CDS             1300..1734
                     /gene="rplK"
                     /locus_tag="VE783_12030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018773647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L11"
                     /protein_id="HYX54173.1"
                     /translation="MAPKKVQTSVKLQIEAGKATPAPPVGPALGQAQINIMEFCKQFN
                     ARTQNKEMAGLIIPVVITVYTDRSFTFITKTPPAAVLLKRAAGIAKGSGTPNKDKVGK
                     VTEKQVLDIAKQKMPDLNAASLDAAVKSVKGTARSMGIEVTA"
     gene            1952..2662
                     /gene="rplA"
                     /locus_tag="VE783_12035"
     CDS             1952..2662
                     /gene="rplA"
                     /locus_tag="VE783_12035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018286742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000311 - plastid large ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L1"
                     /protein_id="HYX54174.1"
                     /translation="MSRKAGKNITKARAAIENKSYPIGEAVPLLQKVKFAKFDETVEV
                     TLRLGVDPKHADQMVRGTVVLPHGLGKSKKVLVVASGEKVREAEAAGADFVGGEDMVE
                     KIQKESWTDFDAVISTPDMMKSVGKLGKILGPKGLMPNPKTGTVTMDIANAVKEIKAG
                     KVEFRTDKTALVHVPVGKISFTADKLVENATTVISSVIRAKPAAAKGKYIKGAYISSS
                     MGPGISVDTSAVEAASKA"
     gene            2785..3336
                     /gene="rplJ"
                     /locus_tag="VE783_12040"
     CDS             2785..3336
                     /gene="rplJ"
                     /locus_tag="VE783_12040"
                     /inference="COORDINATES: protein motif:HMM:NF000955.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015934 - large ribosomal subunit
                     [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L10"
                     /protein_id="HYX54175.1"
                     /translation="MAVTKAKKAEQIEKLNSQLQKASSMIVGTFSKLTVAKDYELRKT
                     VRSAGGRYQVVKNTLAQRASEGTKVGEALKGLKGVSSIAYTDGDPVALAKALSKYVDD
                     NPEFSFKSGVLEGKVLSLAEVKALATMPSKEEIYSKLLFLMNAPAQRLVTVMNAVGRD
                     LAVVINQGVEKKKFKETGEAASS"
     gene            3493..3873
                     /gene="rplL"
                     /locus_tag="VE783_12045"
     CDS             3493..3873
                     /gene="rplL"
                     /locus_tag="VE783_12045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007654177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L7/L12"
                     /protein_id="HYX54176.1"
                     /translation="MADLQQLEEQIVGLSLLDAAQLVKKLEERLGVSAAAAAPVMMAG
                     GGGAAAAAPAEEKTEFTVILTGAGANKINVIKAVREVTSLGLKEAKDLVDGAPKPIKE
                     NVSKEEAETIKKKFTEAGATVEVK"
     gene            4376..>6110
                     /locus_tag="VE783_12050"
     CDS             4376..>6110
                     /locus_tag="VE783_12050"
                     /inference="COORDINATES: protein motif:HMM:NF016450.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX54177.1"
                     /translation="MPNKNGAFRYRLDFSKIPAALQIPNLIEVQKRSYDRFLQMDKLP
                     SERDDSGLQSVFQSVFPITDFRNVSELAFVDYAIGNWECKCGHLKGLHHLRTTCRNCG
                     NTVITDPFHPGDVLCQKCGTYNANTPDFCNKCGDPVGLQLKYDVAECEERGMTYSAPL
                     KVTIRLTIYDKDAETGNKSIRDIKEQEVFFGDIPLMTQNGTFIINGTERVIVSQLHRS
                     PGVFFETANNRTYFLGKIIPYRGSWVEFEYDQKNVLYVRIDRKRKFLGTIFLRALGLR
                     SDEDILRTFYTVDRISLKEKKLRWLLESGIEKPTNLLGLKLAHSIKDKSGHEIAHSGR
                     KISAAVMKEIQKAKITEIDIDTTDLEGAFTAADVVDMNTGDVLLEANNEITADKLSKM
                     MDAGIEEINVFFPERDDVGNVISATLRRDSVKTPQEALIEIYRKLRPGDPPTLDTATA
                     LFHGMFFDARKYDFSRVGRLKFNIKLYEKNDATSLDKRTLDPDDFYSTIKYLLKLRKN
                     IGMVDDIDHLGNRRVRAVGELMENQFRIGLVRMERAIKEKMSVYQEMSTAMPHDLVNA
                     KPVMAAIREFFG"
BASE COUNT         1552 a         1545 c         1867 g         1146 t
ORIGIN      
        1 gccaaaattg ccaggagtga tgattgaaag gctgaggcgg tcggcagttt gtaatgaggc
       61 gaatagagtg agatgcggca tgccgcgtct ccacactgag agcgtggacg tggcgtagcg
      121 tgaaccggca gtgagttctc cgcgcgaaac atcttcgcgc gcaggaagcg ggcaacaagc
      181 agaagcagga aagcaggaag taacaagatt atggccaaag caacagcaat catgcgggac
      241 gagcagacga tgggcggcaa gctggcgcag tttccggcca agaccaaggc gttcctggct
      301 gacgtccgca atgaaatgcg caaggtttcc tttccatcgc ggaaggaagt gcaggcaacg
      361 acagttgtcg tgatcatcac ggtggtgatt ttcggcgtgt atttcttcgt gatcgaccag
      421 gggatcggaa ccgcagtcaa ttgggtgctg caccacctga agtaagctcc cggaaggttg
      481 aagagaagta tggaagaaca gaacaccaca ggcgccgcgg aaaatctgcc cgaagggcag
      541 ccgattccgc ctgcggaaga gatcacgaat cccaacatga agtggtacat catccactcg
      601 tactcggggt tcgagcgcaa ggtgaaagag tcactcgagt cgcgcatcaa ggcgtttgga
      661 ctggagaaca agatcggcaa ggtggtgatc cccaccgaac cggttacgga gatccgcaac
      721 ggcaagaaat acaccgtgga gagaatgttc tatcccggct acgtgctggt gcagatggac
      781 ctgacaggat ttcgcaccgg cggtgaaggc gatcacgtat ggcatgtagt taagtcgacg
      841 cctcgcgtga ccggatttgt gggtacggca aacgatccca caccgctctc agaagacgaa
      901 gtgaaccaga tcgtctatcg cgtgaacgtg ggcaaggaca agccgcggat caaggtcaag
      961 tttgagaaga acgaaaccgt acgcatcacc gatgggccgt ttgcgaattt caacgggatt
     1021 gtggacgacg tgaatgaaga tcgcgaaacg ctgaaggtga tggtgacgat ctttggaaga
     1081 gcgacgccgg tggagctgga gtttggacag gtagagaagg tcgcttagaa atcgccggga
     1141 ttgccagaat tgccagaagt gatgatttgt tctcgtggca atgggcaatc aggccggcct
     1201 ccaatggaag ttctgattga ggcggatcaa tttcggcgat ctttggcaat cctggcaatt
     1261 gagcaagtca ggcaagagtt tagaaaaggt taactacaga tggcacctaa aaaagtacag
     1321 acatcagtaa agctgcagat tgaagccggc aaggctactc cggcgcctcc ggttggaccg
     1381 gcgctgggcc aggcgcagat caacatcatg gagttctgca agcagttcaa cgcgcgcacg
     1441 cagaacaagg aaatggccgg cctgatcatc ccggtggtga ttacggtcta caccgaccgc
     1501 tctttcacgt ttattaccaa gactccgcct gccgcagtgc tgctgaagcg cgctgccggc
     1561 atcgccaagg gctcgggcac gccgaacaag gacaaagtcg gcaaagtgac ggagaagcag
     1621 gtgctggaca tcgccaagca gaagatgccg gatttgaacg cggcgtcact ggatgcggcc
     1681 gtgaagagcg tgaagggcac tgcccgcagt atgggcattg aagtcacagc gtagggagtg
     1741 ccgacggttt gggacgaaat tgccaggatt gccaaaattg ccaagagtga tgatttgggc
     1801 tgtatggcaa attgcagctt cgttgctgca aagacttcta tgagttttaa gcgattgggc
     1861 caattgctaa ctgctaattg ccaattgcta aatcgcaaac accacggccc ggagcacgaa
     1921 gccggaagcg gtgggagata aggaacaatc aatgagccgt aaagcaggca agaacataac
     1981 caaggcgcgt gcggcgatcg agaacaagtc gtatccgatc ggtgaagccg taccgctgct
     2041 gcagaaagtg aaattcgcca agtttgacga gaccgttgaa gtcacgttgc ggctgggcgt
     2101 cgatcccaaa catgctgacc agatggtgcg cggaaccgtg gttctgccgc acggactggg
     2161 taaatcgaag aaggttcttg tggtcgcgag cggcgaaaag gtccgcgaag cggaagctgc
     2221 cggcgctgat tttgttggcg gagaagatat ggtcgagaag atccagaaag aaagctggac
     2281 cgattttgac gccgtgatct ccacgccgga catgatgaag tccgtgggca aactgggtaa
     2341 gattctgggt cccaagggcc tgatgccgaa cccgaagacc ggcaccgtga ccatggacat
     2401 tgccaacgcg gtgaaagaga tcaaggccgg caaggttgag ttccgcaccg acaagacagc
     2461 gctggtccac gttcccgtgg gcaagatttc cttcacggcc gacaagctgg tggagaacgc
     2521 gaccacggtg atcagcagcg tgattcgcgc caagccggca gcggccaagg gcaaatacat
     2581 caagggagca tatatctcct cctcgatggg cccggggatt tcggtggaca ccagcgcagt
     2641 agaggcggcg tccaaagcgt aagaagagat tgccggaatt gccaaaattg gtaatcgccg
     2701 aaattgaagt acacggcgcg gcagcttgaa agatttgtga aacggcgatc tcaagcggag
     2761 attgcggaaa aaagggattg agagatggca gtcacaaaag ccaaaaaagc ggaacagatt
     2821 gaaaagctga acagccagct gcagaaggcc agcagcatga tcgtaggcac gttttccaag
     2881 ctcacagtag ccaaggatta cgagctgcgc aagacggtgc gctcggcggg cggcaggtac
     2941 caagtggtca agaacaccct ggcacagcgc gcttcagaag gcacaaaggt gggcgaggcg
     3001 ctgaaaggac tgaagggcgt gagttcgatt gcctacaccg atggcgatcc ggttgctctg
     3061 gcaaaggcgc tcagcaagta cgttgacgac aacccggaat tctcgttcaa atccggcgtg
     3121 ctggaaggca aggtgctttc gctggctgaa gtgaaagcgc tggcgacgat gccttccaag
     3181 gaagagattt attccaagct gctcttcctg atgaatgcgc cggcgcagcg tctggtcacg
     3241 gtgatgaacg ccgtgggacg tgatctggcc gtggtgatca accagggcgt ggaaaagaaa
     3301 aaattcaagg agacaggcga ggctgccagc agctaagccg gtttcaggcc tgtaccggga
     3361 ggttgtgcga accggggtgg gcagagggtt ctcgcggcaa agactcacgt ggcgcttgtc
     3421 tgggcgcact ggaacgcgat gggatgatgc ggcgaatcag cacaaacgat ttcagaaacg
     3481 tggagagaga aaatggcaga tttgcagcaa ctcgaagaac agattgttgg gctcagcctg
     3541 cttgatgcag cccagctggt aaagaagctt gaagagcgcc ttggcgtgtc cgcggcagcg
     3601 gcagccccgg tgatgatggc gggaggcggc ggagcggcag cagcggctcc ggccgaagag
     3661 aagactgaat tcaccgtgat cctgaccggc gcaggcgcca acaagatcaa tgtaatcaag
     3721 gctgtacgtg aagttaccag cctgggcctg aaggaagcca aggacctggt ggatggcgct
     3781 cccaagccga tcaaggagaa cgtttccaag gaagaggctg agaccatcaa gaagaagttc
     3841 actgaggctg gcgcaaccgt ggaagtgaag tagatcggcc cctccggaag ccatttccgg
     3901 gcagccttag catttttttg gccaatccgg cagaaattct ggccggaagg cttgaatccg
     3961 ggtgaggact tctgttatca aatagataac agcggtcctc ttccgatccg gttttatttt
     4021 tcgaatggtg cagaggcaca cactccggtc aatggaactc acgaaaccgg gggtgtagtt
     4081 ttgtgcgcgg ctttttgctt ttaacaggtc tgtgagaaac agaccgggaa cggtctaagt
     4141 cagacgggcg cgggaaaaac aaatcagaac acggcatttc gccatctggg cgtcaatggg
     4201 aacttttgtc tcccgctggc ccttttcgtc ttttccgcct gccccgtctc cggtgcagtg
     4261 agtttgaagc tgcatagtta acaggttttg cccggcaaaa gcaagtaaaa atccgggcat
     4321 tggccgggta ggtccgagag ccagcagcgg gccgcaacga gtttaggagt gattcatgcc
     4381 gaataagaat ggcgccttcc gttatcgtct cgatttttcc aagattccgg cagctctcca
     4441 gatccccaac ctcattgagg tgcagaagcg ttcttacgat cgcttcctgc agatggacaa
     4501 actgccgagc gagcgcgacg acagcggact gcagtccgtt tttcaatccg tttttcccat
     4561 cactgatttc cgcaacgttt ccgaactggc ctttgtggac tacgccattg gcaactggga
     4621 gtgcaagtgc ggacacctga agggcctgca tcacctgcgt accacctgcc gtaattgcgg
     4681 aaacacagtc atcactgatc cgtttcatcc tggcgacgta ctctgccaga agtgcggcac
     4741 ctacaacgcg aacacacctg acttctgcaa caagtgcggt gatccggttg gcctgcagct
     4801 gaaatacgac gtggccgagt gcgaagagcg cggcatgact tattccgcgc cgctgaaagt
     4861 cacgattcgc ctgacgatct atgacaagga cgcggagacc ggcaacaaga gcattcgcga
     4921 catcaaggaa caggaagttt tcttcggcga tatcccgctg atgacgcaga atggaacgtt
     4981 catcatcaac ggcaccgagc gcgtgatcgt gagccagttg caccgttcgc cgggcgtgtt
     5041 ctttgagacc gccaacaacc gcacctactt cctgggcaaa attattccat atcgcggcag
     5101 ctgggttgaa tttgagtacg accagaaaaa cgtgctctac gtccgcattg atcgcaagcg
     5161 caagttcctg ggcacgatct ttctccgcgc gctgggcctg cgttccgatg aagacattct
     5221 gcgcacgttc tacacggttg accgcatcag cctgaaggaa aagaaactgc gctggctgct
     5281 ggagagcggc attgaaaagc cgacgaacct gctggggctg aagctggccc acagcatcaa
     5341 ggacaagagc ggtcatgaga tcgcccactc cggccgcaag atttccgcag cggtgatgaa
     5401 ggaaatccag aaggcaaaga tcaccgagat cgacatcgac acgactgatc tcgaaggcgc
     5461 attcaccgca gctgacgtgg tggacatgaa caccggcgac gtgctgttgg aagccaacaa
     5521 cgaaatcacg gcggacaagc tgagcaagat gatggacgcc gggattgaag aaatcaatgt
     5581 tttcttcccc gagcgcgatg acgtgggcaa cgtgatcagc gcgacgctgc ggcgcgactc
     5641 cgtaaagacg ccgcaggaag cgctgattga aatctaccgc aagctgcggc cgggcgatcc
     5701 tccgaccctg gacaccgcca cagcgctgtt ccacggcatg ttctttgacg cccggaaata
     5761 cgacttcagc cgcgtgggcc gcctgaagtt caacatcaag ctgtatgaga agaatgacgc
     5821 aaccagcctg gacaagcgca cgctcgatcc cgacgacttc tattcgacga tcaagtacct
     5881 gctgaagctg cgcaagaaca ttggcatggt agacgacatc gatcatctcg gaaaccgccg
     5941 cgtgcgcgcg gtgggcgagt tgatggaaaa ccagttccgc attggcctgg tgcgcatgga
     6001 acgcgccatc aaggaaaaga tgagcgtgta ccaggagatg tccacggcca tgccgcacga
     6061 cctggtcaat gccaagccgg tgatggctgc cattcgcgag ttcttcggat
//
LOCUS       DASQYP010000369         5684 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_126159, whole genome shotgun sequence.
ACCESSION   DASQYP010000369 DASQYP010000000
VERSION     DASQYP010000369.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 5684)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5684)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5684
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_126159"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(101..436)
                     /locus_tag="VE783_12055"
     CDS             complement(101..436)
                     /locus_tag="VE783_12055"
                     /inference="COORDINATES: protein motif:HMM:NF015957.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PspC domain-containing protein"
                     /protein_id="HYX54178.1"
                     /translation="MFCNSCGKQIPDDAQLCAYCGRAVAGAAVPKRLVRVREGRQIAG
                     VCKGVAEYFGLDVALVRIVWVVCAVFGLLGVVAYFAAWIIMPEEPLALTTGDQSLVRT
                     TTTSSVVQR"
     gene            complement(540..1637)
                     /locus_tag="VE783_12060"
     CDS             complement(540..1637)
                     /locus_tag="VE783_12060"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX54179.1"
                     /translation="MTKSGFGHFYSLEYDDAIKDFQKAAELRPDDPSAANHLLDAYLY
                     RDLNRYDALDTRLYIKQGFMNSKQVPMDAAAKKQLKDLMDRAVSLSEKRLKSDPRDAQ
                     ALYDRGVTEGLRATYMTIVEHSWFGALRSALAARHDHEDVLKLHPDWVDAKTVVGAHL
                     YVVGSLTMPAKAMAGIAGIHGDKKRGLEMLDEAGKARGETSEDARVAEALFLRREGDF
                     DHGLEVVRTLTRDHPKNFLFALEESNLLQNSHKNAEAVTSLKTLLAGCKDGKYPSAHT
                     ELAYLTLGDAYREMNQLQDSLAAYKAAADAAASVPDYKQKALLAAGEVSDMLSRREEA
                     MLDYRTVIAMDGSSEEAGTARKHLDKPYRGR"
     gene            1870..2106
                     /locus_tag="VE783_12065"
     CDS             1870..2106
                     /locus_tag="VE783_12065"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX54180.1"
                     /translation="MTRPFRPFKEFYTEAEAAGSLNISISELHSLLDEHIFNDGNPRP
                     CDINFSEADLVLLGFWSKSKENPKVIRMPRRREA"
     gene            2253..2675
                     /locus_tag="VE783_12070"
     CDS             2253..2675
                     /locus_tag="VE783_12070"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ribbon domain-containing protein"
                     /protein_id="HYX54181.1"
                     /translation="MAHMAPNYEDRQEFWKPVVAPRAEREIAQVQEQTCASCGTDYVL
                     GSRFCHVCGADRQVNLSDTAIAADRPILAFRETLGQSTASLVSLVLGVGCVIAAIVTG
                     FLFTANNLLDWQAIQIWRIEWLLAAVAIFVAGLLLKKK"
     gene            complement(2728..3909)
                     /locus_tag="VE783_12075"
     CDS             complement(2728..3909)
                     /locus_tag="VE783_12075"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5666 domain-containing protein"
                     /protein_id="HYX54182.1"
                     /translation="MQRSPNSLLIFLALSALAAWAQSQSAEPKAASGIPQTPQSSAPA
                     VSQTPNPAPAATSTPSGTTAPAMPTGTQPNTGSSGTAAGTNASGSSSSGGGQNNSAMP
                     GQRQLSPAAATNGAVPQPIPQPKTEILDSSATGGSLGTDGHDPVLDPPPLPDGITTLV
                     GGTIHGVDRVRNRMTVKVFNGGTWTVGFDERTHIFRQGMQATPLALKKGERVYVDTML
                     DPNLHEILARNIRVGVATTPADADGQITDVDVAHGEVTLRDNISSVPVHFGVDRDTRI
                     AQGSTPVQLRELKPGALVHVQFSPESGTRGMARQISVVAAPGSAFTFIGKLTYLDLRR
                     GLLAVQSTTDGKTYDIHFEPRRTEDADRLTVGSNVKIVATFEGTQYTAQSVQLSGGDS
                     K"
     gene            4149..5390
                     /locus_tag="VE783_12080"
     CDS             4149..5390
                     /locus_tag="VE783_12080"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX54183.1"
                     /translation="MRFRLFPLVALFLAFACSALLPQELRIPLPKKSKYTPVQQLNRQ
                     GVQALQKKNVDRAKRYFYRAYLIDPNDPFTLNNLGYVAELEGDVDRAQRYYDQAQANT
                     SEAIVDQSTEPTDKGKPVAKIAGRTAEGQMKVNQLNVEALRLLNNDRAPEADLLLQQA
                     LKIDANNPFTLNNMGFAKEKEGELEEAIRSYTRAAQTGSKDPVIVAMKVNWRGRPVSE
                     VAAENAEQARKELARASNVEDQVARLNLRGVSAMNRNERKTASEDFQRAYKLDPNNSF
                     TINNMGYLAEIEGDKESAQSYYEQARNARRASARVAVATRPEVEGQAVGQVADQSTSL
                     VDAAIQSYAEERRRTAGPPVLRTRDNRPVPEPTLPANQTQPQQQPPANNNQLDEPVLI
                     PRGQQQQQQPPEQQSTQPPQH"
     gene            complement(5441..>5684)
                     /locus_tag="VE783_12085"
     CDS             complement(5441..>5684)
                     /locus_tag="VE783_12085"
                     /EC_number="2.7.1.49"
                     /EC_number="2.7.4.7"
                     /inference="COORDINATES: protein motif:HMM:NF020132.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="bifunctional hydroxymethylpyrimidine
                     kinase/phosphomethylpyrimidine kinase"
                     /protein_id="HYX54184.1"
                     /translation="HLGTPVDLVAPATGEAPVLMKGDHISSPSTHGTGCAFSTALACN
                     LASGKNLVQSAKLAKAYVEAGLRKGLRVGKGVGPVV"
BASE COUNT         1180 a         1666 c         1641 g         1197 t
ORIGIN      
        1 ggaccacggg tgtacccttg ccccgaacat cgtagaagat ctcagcgccg tctcgtttga
       61 ttttcatggc aagcagtcag cggtcatgct gagtgccgcc ctatcgctgc accacgctgc
      121 tggtggtcgt ggtcctcaca aggctctgat cacccgtggt gagtgcgagt ggctcttcgg
      181 gcatgatgat ccaggctgcg aaataggcca ctactcccag caggccgaag acagcgcaaa
      241 cgacccacac gatcctgacc agggctacgt ccaggccgaa atattccgcc acgcctttgc
      301 agacgccggc gatctggcgg ccttcgcgaa cgcgcaccag ccgtttagga acggccgcgc
      361 ccgccaccgc ccggccgcaa taagcgcaaa gctgggcatc gtctgggatc tgcttgccgc
      421 aggaattaca gaacatggga gtatcctccg gaaatggcgg tagaaatctg agtcttgcaa
      481 cagccactca gggcagttga aagcctctat ttgttatacg ccgctggcgg cggaatgttt
      541 caccggcccc gataaggttt atcgaggtgc ttgcgagcgg ttccggcttc ctcactggat
      601 ccgtccatgg ctattaccgt gcggtaatcc agcatggctt cttcacgacg ggagagcatg
      661 tcggagactt cgccggccgc gagcagagct ttctgcttgt agtctgggac acttgccgca
      721 gcatcggccg ccgctttgta agccgccagc gagtcctgca gctggttcat ctcacggtag
      781 gcatcgccca gcgtgaggta tgccaattct gtatgggcgc tcgggtattt cccgtccttg
      841 cagccggcca gcagggtttt caggctggta accgcctccg catttttgtg cgagttctgg
      901 agcaagttac tctcttccag agcaaacaag aagtttttcg ggtggtccct ggtgagcgtg
      961 cggacgacct ccaggccgtg atcgaagtcg ccttcgcgac ggaggaatag cgcctccgcc
     1021 acacgggcgt cttcgctggt ctcgccgcgg gccttaccgg cctcgtccag catctccaag
     1081 cctcttttct tgtcgccgtg gatcccggca attccggcca ttgccttggc cggcatggtg
     1141 agtgagccca ctacataaag gtgggccccc acaacggtct tggcgtccac ccaatccggg
     1201 tgaagtttga gcacgtcttc atggtcatgg cgggccgcca acgcgctacg cagggcgcca
     1261 aaccaggagt gctccacaat ggtcatgtaa gtggcccgga gtccttcggt taccccgcga
     1321 tcataaaggg cctgtgcatc cctagggtct gacttaaggc gtttctctga gaggctaacg
     1381 gcccgatcca tgaggtcttt caactgtttc ttcgccgcgg cgtccatcgg gacctgttta
     1441 ctattcataa acccctgctt tatgtaaagc cgggtgtcaa gcgcgtcgta acggttcagg
     1501 tcgcggtaga gataggcgtc cagcaggtgg ttggctgcgg aggggtcgtc aggacgcagt
     1561 tccgcggcct tctgaaaatc cttgatggcg tcgtcgtatt cgaggctgta gaaatgaccg
     1621 aatccgctct ttgtcaaggc ctgaaaatca ggcttttcgg gcgaaggtcc ggctgcccag
     1681 acgtttactg ataagacagt aatcaaaaac agcaggaaaa gtaggttact tgcaggcctc
     1741 tggagggggg agcgataagg tctcatgggt tcagctatcg agaagtttac ctgatttgtc
     1801 ctcgtacccg gacaagatag aacatctttg gctcccccgc atccttacga agggatacgg
     1861 aacaaccaga tgacccgacc atttcgtcca ttcaaagagt tctacaccga agcagaggca
     1921 gcaggctcgc tgaacatctc gatctccgag ctgcactccc tgcttgatga acacatcttt
     1981 aacgatggca acccacgtcc ttgcgacatc aatttctctg aagccgacct ggtgcttctg
     2041 ggattctgga gcaagagcaa agagaatcca aaagtgatcc gcatgcccag gcgccgcgag
     2101 gcctgaagct tttacccgta aatatttcct gattttcggc ccttcctgcg cgccgggaac
     2161 aagcaaatct tttgcttcca atgggttagc tctctcatgc cctttggaag caaaagtgct
     2221 ttatttccct acaacgggaa aggttcaaat ctatggcaca catggcgccg aattatgagg
     2281 atcggcagga gttttggaag ccggttgttg cgcctcgcgc cgaacgcgaa attgcgcagg
     2341 tgcaggagca gacttgcgcc tcctgcggca cagattatgt tctgggctcg cgtttttgcc
     2401 acgtttgcgg cgctgatcgc caggtgaacc tttcagatac ggccattgct gctgatcgcc
     2461 cgatcctggc gttccgtgag acgctgggac aaagcacagc ctcgctggtc tctctagtcc
     2521 tgggagtggg ttgcgtcatc gctgcaatcg ttacaggctt tctttttacc gccaacaacc
     2581 tgcttgattg gcaggcgatc cagatctggc gcattgaatg gttattggct gcggtagcga
     2641 tctttgtcgc tggactcctc ttgaaaaaga agtagctttc ctcaatggct gaatactgcg
     2701 gcgccttgga gcgccgcttt tttgtctcta cttgctgtcg ccaccgctga gttggacaga
     2761 ttgggccgtg tactgcgttc cttcgaaggt cgccacaatc ttcacattcg atcctaccgt
     2821 gagccggtca gcatcttccg ttcggcgcgg ctcaaagtgg atatcgtaag tcttgccgtc
     2881 ggtcgtactc tgcaccgcca gcaatccccg gcggaggtcg agataggtca gcttgccgat
     2941 aaatgtaaat gccgagccgg gcgcggcaac cactgaaatc tgccgtgcca tgccgcgggt
     3001 gccgctctcc ggagagaact gcacatgcac cagcgctccc ggcttgagct cgcgaagctg
     3061 aactggcgtg ctgccctggg cgatgcgtgt gtccctgtcc acgccaaagt ggaccggaac
     3121 tgaactgatg ttgtcgcgca gcgttacctc tccgtgggcc acatccacgt cagtaatttg
     3181 tccatcggca tcggctgggg tggtcgccac acccacccgg atattgcgcg ccaatatttc
     3241 gtgcagattg ggatccagca tagtgtccac gtagacccgc tcgccctttt tcagggccag
     3301 cggagtggcc tgcattccct gccggaaaat gtgggtcctc tcgtcaaaac cgactgtcca
     3361 cgttcctccg ttgaacactt tcaccgtcat cctgttgcgt acgcgatcca cgccgtgaat
     3421 ggtgccgcct accagcgtgg tgatgccgtc cggcaggggt ggaggatcga gcaccggatc
     3481 gtggccatca gtcccaagtg aaccgccggt cgcggagcta tcaagaattt ccgttttcgg
     3541 ttgcgggatt ggctgaggta ccgcgccgtt cgttgctgcc gcaggtgaga gctgcctctg
     3601 accgggcatc gccgaattgt tctggccgcc gccggatgag gaagaacctg aagcgttggt
     3661 gccggctgcc gttccggaag agcctgtgtt gggctgcgtt ccggtcggca tcgcgggcgc
     3721 tgtggttcca gacggagtgc tggtagccgc cggagctgga ttgggcgtct gggagacggc
     3781 cggagcgctc gattgcggcg tctgggggat tccagaagcc gccttgggct ccgcagattg
     3841 cgactgcgcc cacgctgcca acgccgagag cgcgagaaag atcaaaagag aattagggga
     3901 acgttgcata ctctcaatgg cacctgccag cagcttggat gcattccgga gctgctcaga
     3961 tggcaaagct tctctgcatc tgaccttcga gcatcggcct ttctgcgcta ttggctcccg
     4021 gatctctggc gcaaacgcgc taccaacctg cagggctgct tccgccatcc aaacccaaag
     4081 cagagctact gcctgccgaa tcagagtttg atctccagag gttgatagac cagaggttga
     4141 gaaaaacgat gcgtttccgc ctgttccccc tcgtggcact gttcctcgcg ttcgcgtgtt
     4201 ctgccctgct tccccaggag ttgcgcatac cgctgcccaa gaaaagcaag tacacgccgg
     4261 tgcagcagct caatcgtcaa ggtgtgcagg cgttgcaaaa gaaaaacgtg gaccgagcca
     4321 agcgctattt ctaccgcgct tatctcatcg acccgaatga cccgtttacg ctgaacaatc
     4381 tgggctatgt ggcagaactt gaaggcgacg tggaccgcgc gcagcgttac tacgatcagg
     4441 cgcaggccaa tacgtcagaa gcgattgtcg accaatcaac tgagcccacg gacaaaggaa
     4501 agccggtggc aaaaattgcc ggccgcaccg cagaagggca gatgaaagtt aaccagctca
     4561 acgttgaggc cctgcggctc ctgaataatg atcgcgcgcc ggaagccgac ctgcttctgc
     4621 agcaggcgct gaagattgat gccaacaatc ctttcacgct gaacaacatg ggctttgcca
     4681 aggagaaaga aggagagctg gaagaggcga tccgctccta cacaagagcg gcgcagaccg
     4741 gctccaaaga cccggtgatc gtggccatga aggtaaattg gcgaggccgc ccggtgagcg
     4801 aagttgccgc tgaaaacgct gaacaagccc ggaaagagct ggcgcgggcc agcaacgttg
     4861 aagaccaggt ggcgcggctg aacctgcgtg gcgtttcggc aatgaatcgc aatgagcgca
     4921 aaacagcctc tgaggatttc cagagggctt acaagctcga cccgaacaat tccttcacca
     4981 taaacaacat gggctacctt gcagagattg aaggcgacaa ggaaagcgct cagtcctatt
     5041 acgaacaggc gcgtaacgcg cggcgtgctt cggcccgagt tgcggtggcg acccgtcccg
     5101 aagtggaagg gcaggctgtg ggccaggttg ccgatcagag caccagcctg gtagatgccg
     5161 ccattcagag ttatgcggaa gaacgcaggc gcaccgccgg accaccagta ctgcgtacgc
     5221 gtgacaaccg tcctgtgccc gaacccacgc tccctgcaaa ccaaacccaa ccacagcagc
     5281 aaccgccggc gaataacaat caactggacg agcccgtgct gattccgcgc ggccagcaac
     5341 agcagcaaca accacccgag cagcagagta ctcagcctcc gcagcactga tcgccgctca
     5401 ggctggagtg ccagtgaggc aggtgtgttc ccctggcttg ctacactacc ggccctacac
     5461 ctttaccaac ccgcagccct ttgcgaagtc ctgcttccac gtaagctttg gcgagcttgg
     5521 ctgattgtac gagatttttc cctgaagcca gattgcaagc cagcgcggta gaaaaagcgc
     5581 agccggttcc gtgcgtggag gggctggata tgtgatcgcc tttcatcaaa acaggcgctt
     5641 ctcctgtcgc cggagccacc agatccaccg gcgtaccgag gtgc
//
LOCUS       DASQYP010000370         6073 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_126179, whole genome shotgun sequence.
ACCESSION   DASQYP010000370 DASQYP010000000
VERSION     DASQYP010000370.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 6073)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6073)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6073
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_126179"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            470..718
                     /locus_tag="VE783_12090"
     CDS             470..718
                     /locus_tag="VE783_12090"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX54185.1"
                     /translation="MGIFISALLLALGAPFWYKALQSLLKLKSIIAQKDDQQRQARQS
                     GSTEDGAAPATAKNGGGGSTTALPPAFQGEQGDLKAVG"
     gene            729..1463
                     /locus_tag="VE783_12095"
     CDS             729..1463
                     /locus_tag="VE783_12095"
                     /inference="COORDINATES: protein motif:HMM:NF013661.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042834 - peptidoglycan binding [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan recognition family protein"
                     /protein_id="HYX54186.1"
                     /translation="MDKTFVGCASVNFRPGRPLGFKPEAIVIHIAVGSLPSVDSQFNN
                     PASKVSAHYCVGKKGQVHQYVHETDTAFHAGIVVNPSWPLLKPDVNPNFYTIGIEHEG
                     LPDDVWPESQLATSAALVSAIAQRWNIPLDDQHVIRHHQIRASKTCPGNVITIAAILA
                     RAFVEPAANAQPSLIVRTITNLNLRIGRAAVDAPLARVIPRNTSVSVSGAVKGEAVKG
                     NPAWYSDGNGNFLWAGGTDTPTPALP"
     gene            complement(1492..1686)
                     /locus_tag="VE783_12100"
     CDS             complement(1492..1686)
                     /locus_tag="VE783_12100"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX54187.1"
                     /translation="MKAQLGQREEALRLLHHAVEPGLNDVDLVVISTEPNFASLDDDS
                     RFTTLAAEAKAKDTSGQASR"
     gene            complement(2077..4896)
                     /gene="alaS"
                     /locus_tag="VE783_12105"
     CDS             complement(2077..4896)
                     /gene="alaS"
                     /locus_tag="VE783_12105"
                     /EC_number="6.1.1.7"
                     /inference="COORDINATES: protein motif:HMM:TIGR00344.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004813 - alanine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006419 - alanyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alanine--tRNA ligase"
                     /protein_id="HYX54188.1"
                     /translation="MNTATMPTGSQIRETFLRFFESKGHKRVHSSSLVPANDPTLLFT
                     NAGMNQFKDVFLGAERRDYSRAVTSQKCVRAGGKHNDLENVGFTKRHHTFFEMLGNFS
                     FGDYFKRDAVAYAWELVTSAEWYGIPKDRLYCTIFKGEKEVPRDDEAEKYWLEVGVPK
                     ERIFEMGMKDNFWSMGDTGPCGPCSEIHYDMGPAASDEAHGDCKFPCECGRYVEIWNL
                     VFMQFDRDAQGVLNPLPKPSIDTGMGLERVSAVLQGKLSNYDTDLFVPLIQAAAKFTG
                     VDLGRELAAEKSAKSAASLRVIADHARATTFLISDGVLPANDGRGYVLRKILRRGIRH
                     GRLLGAKQPFMYKMVGAVRDRMKDAYPELAETADRVAKVVHEEERRFAHTLDEGLARL
                     EADLQAVRKEYADAQRLVAAQDQHTDAGVGRAQMAQYRYNAERGMRYRGDLAFKLYDT
                     FGLPFDFIMDACRDAGIALDVEGFERAMEAQRERARASWKGGSKQTAPPVFRDLTKTV
                     FDGYRQTESRDCEVLALVKDGVGVRELKAGEEGEAVLDHSPFYADSGGQVGDIGVFFD
                     AAHTTVVADVNGCIMPVQGVRAHKIKARQPMHVGMKVDAAVHSEVRDSTKRNHTATHL
                     LHAGLREVLGKHVKQAGSLVDPGHLRFDFSHFTGVADEELQDIENLVNKEVLRNIKVE
                     TIEDVPIDVAINEYKAMALFGEKYGERVRVIRIGDFSTELCGGTHTAATGEIGLIKIM
                     SEGSVSSGVRRVEAVSGEQSLFHFRKDHQLESLVSTMVPGAQKAESPAEALRSELERK
                     EAEIKKLQKELEQMRMKSAASSVASIDDKIREVKGIKVLAHRADNLERGQMRTLVDNL
                     RNKLGSGVVVLGSAVDGKVTLIVGVTADLTGKVQAGKVIKPIAEKVGGSGGGRPDMAE
                     AGGKDPGQLDAALACAYDAVEAVLK"
     gene            4999..>6073
                     /gene="tyrS"
                     /locus_tag="VE783_12110"
     CDS             4999..>6073
                     /gene="tyrS"
                     /locus_tag="VE783_12110"
                     /EC_number="6.1.1.1"
                     /inference="COORDINATES: protein motif:HMM:TIGR00234.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004831 - tyrosine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006437 - tyrosyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine--tRNA ligase"
                     /protein_id="HYX54189.1"
                     /translation="MANFPPVEEQLAYIKKGAAEIIQKGELRARLENSFKTGKPLRVK
                     AGFDPTAPDLHVGHTVLMRKLKHFQDLGHTVIFLIGDFTGMIGDPTGRSATRPPLTRA
                     DVERNAETYKTQVFKILDREKTVIDFNSRWFGQMSVEDFIRVCGHFTVSQMLEREEFS
                     KRFHEEKPIAIHELLYPIVQGYDSVALQADVELGGTDQKFNLLMGRNLQRDYGQPSQI
                     VLTMPLLEGTDGVQKMSKSYGNYIGINEPPQEIYGKVMSISDQLMWRYYELLTDVKQA
                     EIEQMKSSMHPMEAKKNLAAQIVKDFHGEQAATHAAESWAKQFQKDEVPQDVETQEIR
                     LENYFQSPAWAMRDIPKDGIVVKL"
BASE COUNT         1263 a         1893 c         1663 g         1254 t
ORIGIN      
        1 cgcgctggtg aatcgccttg cgtccgacga tgcggtacga gccgcagtaa ccgataaagc
       61 caaaacgata ctgcagaatg ccggccagag tagcgcgatt accgggagcg accagcatga
      121 tggatcctca aatcccaaac ccggcgcgca gcagccttca gcaagtcctg ctccttcctc
      181 tcctactgtc ccgtcgaaaa gcaagaaggg ttccaccccg ccatccgccg gttcaaatgc
      241 agataagagc ggctcacagg tgccggcgtc aagcccccca agtccagttc caggcgtttc
      301 ttcatcacca actgcgacac tggattccac tgtcactccg gcgccatcac cgtctaccac
      361 tccaagacca actccggatg cgcagcaaca actctacaac ctgctcgacc agaatggctt
      421 gatcgtcctt cctggcggaa agtggcagtt tcctgttggc aataagctat tgggcatttt
      481 catttctgcg ctactactcg cgctgggcgc tccattctgg tacaaggctc tgcagagcct
      541 gctcaagctt aagtccatca tcgctcagaa ggatgatcag cagcgacaag ctcgccagag
      601 cgggagcact gaagatggcg cggcccccgc aacggccaaa aacggcggcg gaggctcaac
      661 cacagctctg ccgccagcat tccagggaga gcaaggcgac ctcaaggcgg tgggttagga
      721 gaggctccat ggataaaaca tttgtcggtt gcgccagcgt gaacttccgt ccgggacggc
      781 cgcttggttt caaaccggag gctattgtca tccacattgc tgtgggcagc ctccccagtg
      841 tcgactcgca gttcaacaat cccgcttcaa aggtttctgc ccactactgc gtcggcaaaa
      901 aagggcaggt ccatcaatat gttcacgaaa ccgacacggc tttccatgcc ggcatcgtgg
      961 tcaaccccag ctggccgctg ctgaagccgg acgtgaaccc gaacttttac accatcggca
     1021 ttgagcatga aggccttccc gatgacgtat ggcctgagtc ccagctcgcg accagcgctg
     1081 ctttggtaag cgcaatcgcg cagcgctgga atatccctct cgatgatcaa cacgtgattc
     1141 gtcatcacca gatacgcgcc tccaaaacct gtccggggaa cgtgatcacc atcgcggcaa
     1201 tacttgctcg agcattcgtc gagccggccg cgaacgcgca accttccctg attgtcagga
     1261 caataaccaa cctgaacctc cggatcggca gagccgcggt ggatgcgccg ctcgctcgcg
     1321 ttataccgcg taacacaagc gtcagtgtct ccggcgccgt gaaaggagaa gcggtgaaag
     1381 gaaaccctgc ctggtactct gatggtaatg gaaactttct gtgggcgggc gggaccgaca
     1441 cgcccactcc tgcactgccc tgaacgcatc gcttctgaag agccgttggg attacctgga
     1501 tgcctggccg ctggtatctt tagctttggc ctcagcggcc agtgtggtaa atcgggaatc
     1561 atcatccaga ctggcaaagt tcggttctgt gctgatcacc accagatcca cgtcattgag
     1621 accgggctcg actgcatgat gcagcagtct caacgcctcc tcccgctggc caagctgcgc
     1681 cttcacgcaa gctaggttga aatccgactc tgcgacctca gctcctgaag cgagttcagc
     1741 ttctccacat tcctggcact tgcttcagaa gcaccgtgcc gcggctgtaa attcccaggc
     1801 tgccatgctg accatcgctg tgcgacgcca tgaaaacagt aggagaagtc ttgcgctcca
     1861 gttcgcaatc aacggagcgc ttgtagcgcg cataaaaata gccctgccca cgggagactt
     1921 cctgattggg cagggcttag gaagatatca acgacgcgtt cagcttggca tacattctcg
     1981 ctgattgcac ctaagttttg tcttaatccc agaatggaac caatgagaga tttttcagaa
     2041 tacttcgcaa cgatgtagcg ccggaacggc ctacagctac ttcagcactg cctctaccgc
     2101 gtcgtaggcg caagccagcg cggcatccag ctgaccggga tccttgccac ctgcttctgc
     2161 catatccgga cggccgcccc ctgatccgcc aaccttctcc gcgatcggct tgatcacttt
     2221 gccggcctgt accttgcccg tgaggtccgc ggtcactccc acgatcaacg tgactttgcc
     2281 gtcaacggct gagcccagta ccacaacgcc ggagccgagc ttgttgcgca ggttatcgac
     2341 gagcgtgcgc atctggccgc gctccaggtt gtcagcgcgg tgtgcgagaa cctttatgcc
     2401 tttcacttct ctaatcttgt catcaatgga agcaacgctc gaagctgcgg acttcatgcg
     2461 catctgctcc agctctttct ggagtttctt gatctcggct tccttgcgtt cgagttcgct
     2521 gcgcagagcc tcggccggcg actccgcttt ctgcgcgccg ggaaccatgg tgctgaccag
     2581 gctttccaat tggtggtctt tgcggaagtg gaacagtgac tgctcgccgc tcaccgcctc
     2641 cactcgccgc acgccggaag acacgctgcc ttcactcatg atcttgatca gcccgatctc
     2701 gcctgtagcc gccgtatgtg tgccgccaca cagctcggtg gagaagtcgc cgatcctgat
     2761 cacgcgcacg cgttcgccat atttttcgcc aaacagcgcc atggccttgt attcgttaat
     2821 ggccacatca atcggcacgt cttcaatcgt ttccactttt atattgcgca gcacttcctt
     2881 attaacgagg ttttcaatgt cctgaagctc ttcgtcggcc acgccggtga agtgcgaaaa
     2941 gtcgaagcgc agatgccccg ggtccaccag cgagcccgcc tgcttcacat gcttgcccag
     3001 cacttcgcga agccctgcat gcagcaggtg cgtggcggtg tgattgcgtt tcgttgaatc
     3061 gcgcacctcg ctatggacag ccgcgtccac cttcatgcca acgtgcatag gctggcgcgc
     3121 cttgatcttg tgggcgcgta cgccttggac cggcatgatg cagccattca catccgcaac
     3181 cacggttgtg tgcgcagcgt caaagaagac gccaatatcg cccacctgcc cgcctgaatc
     3241 ggcatagaac ggcgagtggt cgagtacggc ctcgccttct tcgcccgctt tgagttcgcg
     3301 aacgccaacg ccgtctttta ccagcgccag cacttcacag tcgcgcgact cggtctggcg
     3361 gtagccgtcg aaaaccgtct ttgtcagatc gcggaagacc ggcggcgccg tctgcttcga
     3421 cccgcctttc cacgacgcgc gtgcccgttc gcgctgcgct tccatggcgc gctcaaagcc
     3481 ttccacgtcc agcgcgatgc cggcatcgcg gcaggcgtcc atgatgaagt caaacggcag
     3541 gccgaacgtg tcatacagct tgaaggccag gtcgccgcga tagcgcatgc cacgctccgc
     3601 attgtatctg tattgcgcca tctgtgcgcg tcccacgccc gcgtctgtgt gctggtcctg
     3661 ggccgccacc aggcgctgcg cgtcggcata ctctttgcgc accgcctgga gatcggcctc
     3721 aagccgcgcc agaccctcat ccagcgtgtg agcaaagcgc cgctcttctt catgtacgac
     3781 cttggcaacg cggtcggccg tctctgccag ttcggggtag gcgtctttca tccgatcgcg
     3841 gacggcgccc accatcttgt acatgaacgg ctgtttcgcg ccgagcaggc gtccgtggcg
     3901 gatgccgcgc cgaagaatct tgcgcagcac gtagccgcgg ccgtcattcg caggcagcac
     3961 gccgtcactg atgaggaagg tcgtcgcgcg cgcgtgatcg gcaatcaccc gcagtgacgc
     4021 cgccgacttg gcgctctttt ccgcggccag ttcgcggccc aggtcaacgc cggtaaactt
     4081 tgcggccgcc tgaatcagag gaacgaacag atcagtgtcg tagttagaga gcttgccttg
     4141 cagcaccgcc gagacgcgct ccagccccat ccctgtatca atcgacggct tgggcaacgg
     4201 attgagcacg ccctgagcat cgcgatcaaa ctgcatgaag acgaggttcc atatctccac
     4261 gtagcgcccg cactcgcacg ggaacttgca atcaccgtgg gcctcgtcgg atgcagccgg
     4321 ccccatgtcg taatgaattt cactgcaggg cccgcacggg ccggtatcgc ccatggacca
     4381 gaaattgtcc ttcatgccca tttcaaaaat gcgctctttg ggcaccccca cttccagcca
     4441 gtacttttcc gcctcgtcgt cgcgcggcac ttctttctca cccttgaaaa tggtgcagta
     4501 caggcgatct ttgggaatgc cataccattc cgctgacgta accaactccc atgcgtaggc
     4561 tacggcgtcg cgcttgaagt aatcaccaaa gctgaagttc cccaacattt caaaaaaagt
     4621 gtggtggcgc ttggtgaagc ccacgttttc caggtcattg tgcttgccgc ccgcgcgcac
     4681 gcatttctgt gaggtgacgg cacgcgagta gtcgcgtcgc tcggcgccaa ggaaaacgtc
     4741 cttgaattgg ttcatgccgg cgttggtaaa cagcagcgtg ggatcattgg cgggcaccag
     4801 cgacgaggaa tgcactcgct tgtgcccttt gctttcgaaa aagcgcagga aagtctcgcg
     4861 aatttgagag ccagtgggca tagttgctgt gttcatttta tcaggctgat ttcgcgtggg
     4921 ttgagcggtc gcagcacagc cgcattgccg cgccgcatgg gaatgttcgc gcggcctgac
     4981 actctataat cttccctgat ggctaacttt ccaccagtcg aagagcaact ggcgtacata
     5041 aaaaagggcg cggcggagat catccaaaag ggcgaactac gcgcgcgcct ggaaaattcg
     5101 ttcaagaccg gcaagccgct gcgcgtgaag gccggctttg atcctaccgc gcctgacctt
     5161 cacgtgggcc acaccgtcct gatgcgcaag ctgaagcact ttcaggacct cgggcacaca
     5221 gtgattttcc tcatcggcga cttcaccggg atgatcggcg atcccacggg ccgctcggcc
     5281 acgcgtccgc cgctcacccg cgctgacgtg gagcgcaacg ccgagaccta caaaacgcag
     5341 gtcttcaaga ttctcgatcg cgagaagacg gtcattgatt tcaactcgcg ctggtttggc
     5401 cagatgtcag tagaagattt catccgcgta tgcggacact ttacggtgtc gcagatgctg
     5461 gagcgcgaag agttcagcaa gcgttttcac gaagaaaagc ccattgcaat ccatgagttg
     5521 ctctacccca ttgtccaggg ctatgactcc gtcgcgctgc aagccgatgt tgaactgggc
     5581 ggcaccgatc agaagttcaa tctgctgatg ggccgaaacc tccagcgcga ctacggccag
     5641 ccatcgcaga tcgtgctgac catgccgctg ctcgaaggca ctgacggcgt gcagaagatg
     5701 tccaagagct acggcaatta catcggcatc aacgagccgc cgcaggaaat ttatggcaaa
     5761 gtcatgtcca tctccgatca gctcatgtgg cgctactacg aactgctgac ggacgtgaag
     5821 caggccgaga tcgaacagat gaagagctcc atgcacccga tggaggccaa gaagaatctg
     5881 gcggcgcaga tcgtgaaaga cttccacggc gagcaggcgg ccacgcacgc cgcggagagc
     5941 tgggcaaagc agttccagaa ggatgaggta ccgcaggatg tggaaaccca ggagatcagg
     6001 ttggagaatt attttcagtc tccagcatgg gcgatgcgtg acattcctaa agatgggatc
     6061 gtcgtgaagc taa
//
LOCUS       DASQYP010000371        16877 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_17909, whole genome shotgun sequence.
ACCESSION   DASQYP010000371 DASQYP010000000
VERSION     DASQYP010000371.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 16877)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16877)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16877
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_17909"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..360
                     /locus_tag="VE783_12115"
     CDS             <1..360
                     /locus_tag="VE783_12115"
                     /inference="COORDINATES: protein motif:HMM:NF013226.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0016765 - transferase activity,
                     transferring alkyl or aryl (other than methyl) groups
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UbiA family prenyltransferase"
                     /protein_id="HYX54190.1"
                     /translation="TFWVGGFDVLYACDDLEFDRNYGLNSIPQALGVPRALLLARTLH
                     VLMLGLLVALVIVFGLGKIAVAGVIVVGLLLAYEHSLVSATDLSKLNAAFFTMNGVIA
                     VVFFIFVATDLLLRFKS"
     gene            463..2046
                     /gene="purH"
                     /locus_tag="VE783_12120"
     CDS             463..2046
                     /gene="purH"
                     /locus_tag="VE783_12120"
                     /EC_number="2.1.2.3"
                     /EC_number="3.5.4.10"
                     /inference="COORDINATES: protein motif:HMM:NF002049.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0003937 - IMP cyclohydrolase activity
                     [Evidence IEA];
                     GO_function: GO:0004643 -
                     phosphoribosylaminoimidazolecarboxamide formyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006164 - purine nucleotide biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     phosphoribosylaminoimidazolecarboxamide
                     formyltransferase/IMP cyclohydrolase"
                     /protein_id="HYX54191.1"
                     /translation="MPRIQRAILSVTDKSGLVEFAGQLAAMNVELVSTGGTAKLLRES
                     SVPVKDISELTGFPEMMDGRVKTLHPRVHGGILHVRNNAEHVAAAKQHGIQPIDMVVV
                     NLYAFEKTAAKPGAHFDELIENIDIGGPSMVRSAAKNFRDVAIVTSPEDYAGITQEMT
                     ASKGELSLGTRWRLAQKAFATTAAYDSAIAATLAGISFDQDSDNLNTGNFKLPEAHSG
                     FPSVLKISLNKVMDLRYGENPHQKAAMYSDGSPAGVANGRQLQGKELSYNNIVDLQAA
                     WDLAQEFDEIACAIIKHTNPCGTATGKTQKEAYVRALEVDPVSAFGGVIGLNRVVDGA
                     AAEEMAKLFVEVIAAPGFDAAARERFAAKKNLRLVEVQSLAQKYAMKHVSGGMLVQDP
                     DIRPLTPADLKVVSKRQPTQEEMRALLFAWKVCKHVKSNAIVYSRDGQSVGVGAGQMS
                     RVDSCKIGAMKAILPLKGTVAASDAFFPFPDGVEEIAKAGATAVIQPGGSVRDQEVID
                     AADRLGLAMVLTGVRHFRH"
     gene            2168..4270
                     /locus_tag="VE783_12125"
     CDS             2168..4270
                     /locus_tag="VE783_12125"
                     /inference="COORDINATES: protein motif:HMM:NF024821.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HYX54192.1"
                     /translation="MRFSVTRSLLIAVALSSVTAFAQTKPAAKPAPPQMQPQQQPPAA
                     QVPQPSTKKPDKAAAYYHFALAHMYEELVDQNGRSEYANKAIEEYRLAIENDPSSEFL
                     NSHLAELYARTGRIRDAVNEAQDLLKRDPNNLEAHRLLGRIYLRSLGDMQSNQQGREV
                     LKLAIEQYEALARLEPDNADNHQLLGRLYILNKDTNKAESEFKTALKIDPTSEDAVTN
                     LAYLYNEIGDTKKATETLISVPEASRTSKINSALGYTCEQQKDYKKAIEAYREAVKQD
                     KENLDAMRGLAQNLANDGQTDAALQEYLTIQSADPQDANSALRISEIYRRQGKFDLAM
                     QNLKKAQSLVQDSLEVSYNEAVILEATGKYDEAAVVLQKLVAKSAPPDGNYGPGEKAN
                     RALFLERLGNVYREENRPLLANETFRKMVDLGGEEAARGYQEIIDTDREQKQWNDAEK
                     VAQEAVKKLPNDKNLKLTLALQLADDGKGEEGIQMAKSALKGGPEDRDTYMQLSQVYQ
                     RLKRWKDSEEALAQAEKLAGKPEEKEFVQFAYGALYERQKKYDQAEQSFRKVLQLDPN
                     NTMTLNYLGYMLADRNVHLEEALNMIKRAVELDPQNGAYLDSLGWAYFRMGNYDKAEE
                     NLRRAAEKTPNDATIQDHLGELYSKTGQHKLAVAHWERALTEWQRSVPADVDQQDVAR
                     VQKKLESTKVKLAQQQAK"
     gene            4368..5486
                     /locus_tag="VE783_12130"
     CDS             4368..5486
                     /locus_tag="VE783_12130"
                     /inference="COORDINATES: protein motif:HMM:NF002326.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016793 - triphosphoric monoester
                     hydrolase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="deoxyguanosinetriphosphate triphosphohydrolase"
                     /protein_id="HYX54193.1"
                     /translation="MLAPYALRPEQSRGRRFSEPAHPYRNDFQRDRDRVVHSRAFRRL
                     ENKTQVFSHRYSDHFRNRLTHTIEVAQISRTIAAELGLNEDLVEALALVHDVGHPPFG
                     HAGEKRLDQLMREHGDFFDHNLHALRIVEQFEQRYAEFPGLNLTFEVREGIIKHSRDY
                     SALEYPQLSEYMLDERPPLEAQLIDLTDEIAYNTADVDDGLEALILSHEQVRRAPMFA
                     EALREAEQLYPEAPDKLKFNEALKRVMDRLVSDLISNTRRRITEAGIATAEDARQFPE
                     RLCGFSPEVDAARRELKTFLYENFYYSPTIKADKEEGEHVIAELFRFFMNSPEELPHT
                     YQEKLTQEPLHRVVCDYIAGMTDNYVREQHRRFCIQRA"
     gene            5886..6803
                     /locus_tag="VE783_12135"
     CDS             5886..6803
                     /locus_tag="VE783_12135"
                     /inference="COORDINATES: protein motif:HMM:NF012894.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OmpA family protein"
                     /protein_id="HYX54194.1"
                     /translation="MKTSYILSLSLAAALAVPAVAQQNQTSNTQDQQTQAAQPQQQQA
                     QSQSENATGKEPLKYERHEGFWGHMNPFARKKYVNRQLDPVRGRVNELDELTAKNAKM
                     IADVDSRATEGIRQAMGKANDADTHALDAANRANQAQQTAQTAHTRIGSVEQTVSKLD
                     QYTPVTQAEIRFRPGQSALSNNAKEALDQIATSLKGQKGFIVEVEGFSPGNGTVAIEN
                     SREMAQMVVRYLVLNHNVPLYRIYTVGMGNAPLQSEDGKMKKARGGRVEISLLKNSLG
                     DMNAAAGDQQAPAQAQPQQQQPSNPPQQN"
     gene            complement(8096..9634)
                     /locus_tag="VE783_12140"
     CDS             complement(8096..9634)
                     /locus_tag="VE783_12140"
                     /inference="COORDINATES: protein motif:HMM:NF012711.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl--CoA ligase family protein"
                     /protein_id="HYX54195.1"
                     /translation="MISTLTPLDFIARSGSVYRDYVAVVEGDQRLTYGELKERVHRLA
                     SALQRTGIRPGDRVAMLSRNRIPALECHFGVALAGAVLVMLNTRLNASEIATILNHSG
                     ARLLLGEPHLLKPLESVKGELKSLERIEDDYEAFISKGDPGFHGAEPEENGVISINYT
                     SGTTGIPKGVMYTHRGAYMNALGEVIEHGISHSSVYLWTLPMFHCNGWCFPWAVTSVG
                     ARHICLPDLDPKRAVELIQQEGVTHLCGSPTVLLMLTEYCRVNNIKFGHRLKIVTAGA
                     PPSPAVIRAVEEMEASVAHVYGLTETYGPHTICAWQSQWNSLPLAERATLRARQGVGY
                     VVTGMNVRVVDEQMKDVPKDGETIGEIVMRGNNVMAGYFNDPEATEKAFAGGWFHSGD
                     LAVMQPNGYIEIRDRSKDIIISGGENISSVEVEKVLCDHPAVLEAAVVGVSDPKWGEV
                     PLAYITLREGKSATGAELIEYSRSRLAHFKCPKYVEFRTLPKTSTGKIRKNVLRTEAR
                     AAQG"
     gene            complement(9765..10727)
                     /locus_tag="VE783_12145"
     CDS             complement(9765..10727)
                     /locus_tag="VE783_12145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009239537.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HYX54196.1"
                     /translation="MTPTPKEPRFLKYAACAVLLVAALVAPFVVYPIFLMKALCFALF
                     ACAFNLMVGYTGLLSFGHAAFFGTAGYITGYLIKQNSFGPAMGILAGTVAAGVLGLLF
                     GTLVIRRQGIYFSMITLALAQLIFFLYLQAPFTGGEDGLQAIPRGRLFWVINLENDLK
                     LYYFVLAIFIAGVFLTWRIINSPFGQVLKAIRENEPRAISLGYDVQRFKLIAFVLSAA
                     LSGLAGATKALVFTFVTLTDSDWHTSGDVVLMTLLGGMGTVFGPVVGAFSIVTLENEL
                     SDKVGPFVTVIIGVIFVCSVLIFRRGIVGEVAALYRRVVGAREQ"
     gene            complement(10728..11615)
                     /locus_tag="VE783_12150"
     CDS             complement(10728..11615)
                     /locus_tag="VE783_12150"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HYX54197.1"
                     /translation="MTTIFGVPVNALYGQLVIGLGNGCFYAMLSLGLSIIFGMLDIVN
                     FAHGAFYMLGAVATWFLLDEFQISYWWALLIVPIALALFGAIVERGLLRRLYRVDPIY
                     GLLLTFGLALVFEGLLRYKYGVSGLPYNIPDRLQGAVNLGFMFLPKYRVWVVVSTMGV
                     CLTTWVIIEKTPLGAYLRAATENPSLVSAFGINVPAMTTITYAVGVGLAGLTGVIAAP
                     ATQVSPLMGSNLIIVVFAVVVIGGLGSIRGSIITGLALGLIEGLTKVYYPPASNTVVF
                     FIMAVVLLLRPAGLFGRER"
     gene            complement(11739..12968)
                     /locus_tag="VE783_12155"
     CDS             complement(11739..12968)
                     /locus_tag="VE783_12155"
                     /inference="COORDINATES: protein motif:HMM:NF024850.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HYX54198.1"
                     /translation="MKGKWIRIVGSSIVAMAGMAVFPQNKQPAPKLSGDVVKIAVLTD
                     MSGLYSDIGGQGSVTAAQLAIDEFGGKVLGKPIQLVYADHQNKADVGANKAREWFDTQ
                     GVDMIVDVPNSGVAIAVSKVAAEKHKLFMIGNAGSTRLTNEDCNPYIIHYVYDTYATG
                     GVTGRAVVQNGGKSWFFITADYAFGHSLQDDTSKAVKAAGGTVVGSVLHPLNAPDFSS
                     YLLQAQASGAKVIGLANAGGDTINAIKAASEFGINKKQTLAGLLVFITDINSLTLQTT
                     QGMYVASGYYWDMNDDTRRLGKKYFAKMKKMPNMAQAGVYSAVLQYLKAIQATGTDDA
                     DTVIKNLKSTTLNDDFVKNGHIREDGRMVHEFYLFQVKSPAESKYPWDYYKLISKVPG
                     DQAFQPLSESRCPMIKK"
     gene            complement(13020..13769)
                     /locus_tag="VE783_12160"
     CDS             complement(13020..13769)
                     /locus_tag="VE783_12160"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HYX54199.1"
                     /translation="MMAIAGESHEGNGNSSAAEYLRVTNLHAFYGESHILHGMDFSVN
                     RGELVTLLGRNGSGRTTTLKAILGLVEKRSGSVMLNGRETVHWPAYRIARLGVGYCPE
                     ERGIFASLSAEENLLLPPRLSSEGMSVEEIYSMFPQLKERRHSQGSKLSGGEQQMLAM
                     ARILRTGARLLLLDEVSEGLAPVIVQTLRKTIAELKTRGFTMILVEQNFRFAAALADR
                     MYVVERGRIVMSVGKDELTEKQEKLEELLRV"
     gene            complement(13766..14518)
                     /locus_tag="VE783_12165"
     CDS             complement(13766..14518)
                     /locus_tag="VE783_12165"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HYX54200.1"
                     /translation="MDAEYILETRGLVKEFKGFVAVSDVNLKVRKGTVHAMIGPNGAG
                     KTTCFNLLTKFLEPTRGSIFFKGQDITREKPADIARRGVIRSFQISAVFPHLTVLENV
                     RIALQRRLGSEYHFWKSHASLRTLDSRAHELLAQVGLEAQAKIVAVELPYGRKRALEI
                     ATTLALDPELLLLDEPTQGMGHEDVDRVKNLIRTLSADRTILMVEHNMSVVADLCQCI
                     TVLQRGSVLAEGNYAEVSANPQVREAYMGSEA"
     gene            complement(14616..16382)
                     /locus_tag="VE783_12170"
     CDS             complement(14616..16382)
                     /locus_tag="VE783_12170"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX54201.1"
                     /translation="MDPSLEQQASLIKGLAEKIKELEGRLAALEVRDAARPENMNIFS
                     VPVPAANPTPLPASHPLQQIATGGSAGVMPVIGKVFLGLAGAYVLRALAESAALPQIT
                     VAVAALLYSAGWLVWAGRSNFRFASGAYGVTASLIVFPLLWEATVRFKILPSFFTAAI
                     LVGFVLLAFFVAWRKDLAAVAWLTTSFAVITALGLFVGTGNPAPFAIAVLLITSSAEC
                     AYAMGHWLSARVISALAADVGMLMLLALYTSRELSPDYVHISVPALLGFMAALFLIST
                     ASTLFTTIVRQQPIKYFSVFQTTVTFLIVTLGSLRATHDAAQLWIGAFCIMSAALSYL
                     AAFTWFDEDRLLRNYHVFSTWAAVLLTYGAFLSFSAHSASAWLCLAALVSIAAAVRTS
                     RVTLAAHSLAFLAVALMSSGFVTFALASVAAEQPQPATLTVVIVAIAAIVCYGAFCKL
                     AAPLYSAFVDRALRFSFAIFCAAALIGLFISVTSQLVSPNPSATATIRTFFLCLLAIS
                     CGFVASRYVRLELLPLGYALMAICTLKLLFEDLRAGSAAWLAISLSVYGLVWVLLPRI
                     TRSKGAMDVPENAHPNAKRMAG"
     gene            complement(16413..>16877)
                     /locus_tag="VE783_12175"
     CDS             complement(16413..>16877)
                     /locus_tag="VE783_12175"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX54202.1"
                     /translation="IDFSLEMLDLIHRIYESDESFRSLDFMVHTRLYLSQIVIQIVLG
                     TVVPIGLLFLTQIVNIGEIWRKRIYVLSGCLTMIGIFAMRWNVVIGGQLFSKSFLGYT
                     TYKLELITREGLLIAVALMLLPLAILYVLVKLLPPWEGAEETAHATSARAGA"
BASE COUNT         3874 a         4698 c         5094 g         3211 t
ORIGIN      
        1 acattctggg tgggtggctt tgacgtgctg tacgcctgcg acgacctgga gtttgatcgc
       61 aactacggac tgaattccat tcctcaggcc ttgggggtgc cgcgcgcact gctgctggcg
      121 cggacgctcc acgtcttgat gctcggctta ctggttgctc tggtcattgt ttttggattg
      181 ggaaaaattg ccgtagccgg cgtgatcgtg gtcggactgc tgttggcata tgagcattcg
      241 ctggtgtcgg ccacggacct gagcaaattg aatgcagcgt tcttcaccat gaacggcgta
      301 attgcggtgg tgttctttat ttttgtggca actgatctcc ttctgcggtt caaatcgtga
      361 aaggcttagc tggctgtcat agcggctttg tcgcgtcatt gcgcggccat aatcgcggct
      421 gataacttag gtgttctccc aatttctctc ccgaggaaca ccgtgcccag aattcagcgt
      481 gccattctca gtgtcactga caagtcaggc cttgtggagt ttgccggcca gctggcggcc
      541 atgaacgtgg agctggtttc caccggcgga actgccaagt tgctgcgcga atccagcgtg
      601 ccggtgaaag atatctctga gcttaccggc tttcccgaga tgatggatgg ccgggtgaag
      661 acgctgcacc ctcgtgttca cggcggcatc ctgcacgtcc gcaacaacgc ggagcacgtg
      721 gcggcggcaa agcagcacgg catccagccg atcgacatgg tggtggtgaa cctctacgcc
      781 tttgagaaga ccgcggccaa gccgggtgcg cactttgacg agctgatcga gaacatcgat
      841 atcggcgggc cttccatggt gcgttccgcg gccaagaatt ttcgcgacgt cgcaatcgtc
      901 acgtccccgg aagactacgc cggcatcacg caggagatga ctgcttcgaa aggcgagctg
      961 agcctcggca cgcggtggcg tctggcgcaa aaggcattcg ccacaactgc cgcctacgac
     1021 agcgcgattg ccgccacgct ggccggcatc agcttcgatc aagacagcga caatctgaac
     1081 accggcaact tcaagcttcc cgaagcacat agcggctttc catcagtact gaagatctcc
     1141 ttgaacaagg tgatggacct gcgctacggc gagaatccgc accagaaagc agccatgtac
     1201 tctgatggtt cgcccgcggg tgtggcgaac ggtcgccagc ttcaggggaa agagctttcc
     1261 tacaacaata ttgtcgatct gcaggcagcg tgggacctag cccaggaatt cgacgagatt
     1321 gcctgcgcca tcatcaagca caccaatccc tgcggcaccg cgactggcaa gacacagaag
     1381 gaagcctatg tgcgggccct cgaagtcgat cctgtttccg cctttggggg tgtgatcggc
     1441 ctcaatcgcg tggtggatgg cgcggcggcc gaggaaatgg ccaaactttt tgttgaagtg
     1501 attgccgctc cgggatttga tgccgctgcg cgcgagagat ttgcggccaa gaaaaatctt
     1561 cgcctggtgg aagtgcaatc tcttgcacag aagtatgcaa tgaagcacgt gtccggcggc
     1621 atgctggtgc aggacccgga tattcgtccg ctcaccccgg ccgacctgaa agtggtgagc
     1681 aaacgccagc ccactcaaga agaaatgcgt gctctgctgt ttgcatggaa agtctgcaaa
     1741 catgtgaaat caaacgcgat tgtctactcg cgcgacggcc agagcgtggg cgtgggcgcg
     1801 gggcagatgt cacgcgtcga ttcctgcaag attggcgcaa tgaaagcgat cttgcctcta
     1861 aagggcacag ttgcggcttc tgacgcattc ttcccatttc ctgatggtgt ggaggagatc
     1921 gccaaagccg gagctacggc cgtgatccag ccgggcggat ccgtgcgcga tcaggaagta
     1981 attgacgcag ctgaccgttt agggctggcc atggtgctca ccggagtacg tcacttccgt
     2041 cactaagtaa agaagtgcaa ggagctgctc tctaaggcgg aacagggcta aaattgaatt
     2101 caggatcagc cactgccaaa gacgtgctcc tccgcatcta aatagaaggt gtcttggtcg
     2161 tcttactatg agattttcag taacccgctc cctgcttatt gccgttgcac tcagctccgt
     2221 aactgcgttt gcgcagacaa aaccagccgc aaagccggcc ccgccgcaaa tgcagcccca
     2281 gcagcagccg cccgccgcgc aggtcccaca gccgagtacc aagaagcctg ataaagctgc
     2341 cgcctattat cattttgcgc tggcgcatat gtatgaggaa ctggtggacc agaacggccg
     2401 ttcggagtat gccaataaag ccattgaaga gtaccggctg gccattgaga acgatccttc
     2461 ttcggaattc ctgaattcgc atctggcaga gctgtacgcg cgcaccggcc gcattcgcga
     2521 tgccgtgaat gaagcccagg acctgctcaa gcgcgatccc aacaacctgg aagcccaccg
     2581 cctgctgggc cggatttacc tgcgctcgct cggcgacatg caatccaacc agcagggtcg
     2641 cgaagtcttg aaactcgcca ttgagcagta tgaagcgctt gcccggctgg agcctgacaa
     2701 cgcagacaat catcagctgc tgggccggct gtacatcctg aataaagata cgaacaaggc
     2761 agagagcgag ttcaaaacag cgctaaagat cgatcccaca tcagaggacg cggttacgaa
     2821 tcttgcgtac ctctataacg agatcggcga caccaagaaa gccacggaaa cgttgatctc
     2881 tgttcctgag gcgagccgca ccagcaagat caactccgct ctgggctata cctgcgaaca
     2941 gcagaaggat tacaagaagg cgattgaggc ctaccgcgaa gcggtgaaac aggacaagga
     3001 aaacctggac gcaatgcgcg gcctggcgca gaacctcgcc aacgacgggc agacggatgc
     3061 tgccctgcag gagtacttga cgattcaatc ggctgatccg caggatgcga actcagcgtt
     3121 gcggatttcc gaaatttatc gccgtcaggg caaatttgac ctggcaatgc agaacctgaa
     3181 gaaggcgcag tccctggttc aggactcgct tgaggtttcc tacaacgagg ccgtcattct
     3241 ggaagccacc ggcaaatacg acgaagctgc cgtagtgctg cagaagcttg tggcaaagtc
     3301 ggcaccgccg gatggcaatt acggcccggg cgagaaggca aatcgcgccc tgttcctgga
     3361 acggcttggg aatgtatatc gggaagaaaa ccggccgctg ctggcgaacg agacgttccg
     3421 gaagatggtt gatctcggcg gcgaagaagc cgcacgcgga tatcaggaaa tcatcgacac
     3481 agatcgcgag cagaagcagt ggaatgacgc ggaaaaggtt gcgcaggagg ccgtcaagaa
     3541 gcttcccaac gataaaaacc ttaagctcac gctcgcgctg caacttgccg atgacggcaa
     3601 gggcgaggaa ggtattcaga tggccaagtc tgccctgaag ggcggaccgg aagaccgcga
     3661 tacctatatg cagctctcgc aggtctacca gcggctgaag cgctggaagg attccgaaga
     3721 ggcgctggcg caggcggaaa aacttgccgg caagcccgaa gaaaaggaat ttgttcagtt
     3781 tgcctacggc gcactctatg agcgccagaa aaagtacgat caggctgagc agtcgttccg
     3841 caaggtgttg caactggacc cgaacaacac catgacgctg aactacctcg gctatatgct
     3901 cgctgaccgg aacgtccacc tggaagaggc gctgaacatg atcaagcgcg cggtggaact
     3961 cgatccgcag aacggggcgt accttgattc gctgggctgg gcctacttcc gcatgggcaa
     4021 ctatgacaag gcggaagaaa acctgcgacg tgcagcggaa aaaaccccga atgacgccac
     4081 catccaggac catctgggtg agctctactc caagaccggc cagcacaagc tggctgtggc
     4141 gcactgggag cgcgctctca cagagtggca gcgctcggtg ccggctgacg ttgatcagca
     4201 ggatgtcgcc cgggtgcaga agaagctgga aagcaccaag gtgaagctgg cgcagcagca
     4261 ggcgaaatga gcaattagcg gatagcaata ggcaattagc cagaagaggc cgagcgcagc
     4321 tcggcctttt gctttctgca aacagcagcc tacattacac tggcagcatg ctggcaccct
     4381 acgccttgcg gccggaacag agccgtggac gccgcttttc tgagcctgcg catccctacc
     4441 gcaatgactt ccagcgtgat cgcgaccgcg tggtgcactc gcgggcattt cgccggctgg
     4501 agaacaagac gcaggtcttt tcgcaccgct actccgatca tttccgcaac cggctgacgc
     4561 acacgatcga agtcgcgcag atctcgcgca ccatcgcggc agaacttggg ctcaatgagg
     4621 acctggtgga agcgcttgcg ctggtacatg acgtcggcca tccgcccttc ggtcatgccg
     4681 gcgaaaagcg gcttgaccag ctcatgcgcg agcacggcga cttcttcgat cacaacctgc
     4741 acgcgctgcg catcgtagag caatttgaac agcgctatgc cgaatttccg gggctgaacc
     4801 tgacgttcga agtccgtgaa ggaatcatca agcactcccg cgactacagc gcgctcgaat
     4861 acccgcagct ttccgaatac atgctggatg agcggccacc gttggaggcc caacttatcg
     4921 acctgaccga cgagatcgct tacaacaccg ctgatgtgga cgacggtctg gaagcgctga
     4981 tcctcagcca cgagcaggtg cggcgggcgc cgatgttcgc tgaggctctt cgggaagccg
     5041 agcagctcta tccagaagca ccggacaagc tcaaattcaa tgaggcgctc aaacgcgtga
     5101 tggaccggct ggtcagtgat ctcatcagca acacgcggcg gcggattacg gaagcgggaa
     5161 tcgcgacggc ggaagatgcg cggcagttcc cagagcggct gtgcgggttc agtcctgaag
     5221 tcgatgcagc tcgccgcgag ctgaagacgt tcctgtatga gaacttctac tacagtccaa
     5281 ccatcaaggc cgacaaggaa gaaggcgagc acgtgattgc cgagctgttc aggtttttca
     5341 tgaactcacc cgaagaattg ccacatactt accaggaaaa gctcacgcag gagccattgc
     5401 accgtgtggt gtgcgattac attgcgggca tgacggacaa ctacgtgcgc gagcagcaca
     5461 gaagattctg tattcagagg gcttgaacgc gtgcgattgc caaaattgcc aggattgccg
     5521 aaattgacaa ttgaaagctg aaaccttgca acgccgattc gagagagtca gtcgaaagca
     5581 ttcgacaagc cgcctatcaa ttccggcgat tctggcaatc ttgggaattt gcctcggtgt
     5641 aaccccctac tttccgtccg tggcgagcat tttttacgta cccgcagctc tgagccgcaa
     5701 ttctcgcctg cgtctatcaa cttgaaaata aaaagcttat cgcaatgctg taaaagcagg
     5761 agtttggcaa tcagattgta ataacccaag gcgaagcgat tttagagcgc gctcgggggt
     5821 gggcttgcac cctgctcgaa gctgccccga agcacgagaa cccccggttc ggaggaattt
     5881 ccgcaatgaa gacgtcttac attttgtcgc tgtcgttggc cgctgcgttg gcagtgccgg
     5941 ccgtcgccca gcagaaccag acgagcaaca cgcaggacca gcagacgcag gcggctcagc
     6001 cgcagcaaca gcaggcgcag agccagtctg agaacgctac cggcaaagag cccttgaagt
     6061 acgagcgcca tgaaggtttc tggggccaca tgaacccctt tgcccgcaag aagtatgtca
     6121 accgccagct ggatccggtc cgcggccgcg tgaatgagct ggacgagctc accgcgaaga
     6181 acgccaagat gattgctgac gttgattcgc gcgcgaccga aggcatccgc caggcaatgg
     6241 gcaaggccaa tgacgctgac acccatgctc ttgacgcggc caatcgcgct aaccaggccc
     6301 agcagaccgc ccagaccgcg cacacccgca tcggcagcgt ggagcagacg gtaagcaagc
     6361 tggaccagta cacccccgtc acgcaggcgg aaatccgttt ccgtcccggc cagagcgcgc
     6421 tgagcaataa cgccaaggaa gcgctggacc agatcgcgac ctcgctgaag ggccagaagg
     6481 gcttcatcgt ggaagtagag ggcttctcgc ccggcaacgg caccgttgca atcgagaact
     6541 cccgtgagat ggcgcagatg gtggtccgtt acctggttct gaaccacaat gttcctctct
     6601 atcgcatcta cacggtcggc atgggcaacg ctcctctgca gtctgaagac ggcaagatga
     6661 aaaaggcccg cggtggccgc gtggagatca gcctcctgaa gaacagcctg ggcgacatga
     6721 acgccgccgc tggcgaccag caggccccgg cgcaggcgca gccgcaacag cagcagccga
     6781 gcaatccgcc gcagcagaat taagcgcaac aatcatcctc acaaactcaa tgaccaaacc
     6841 ttcctccctc ctggcttagt gccaggaggg aatttttttg tgcccccaca actcccctca
     6901 tcgcttaata acttacgcgg tgatgagtag ttgctgttcg cttcaccggc aatttacccg
     6961 ctgtggattg tttaagacga gcgatgcgga caggctatga cgcagaagga tctaaatcat
     7021 gcgtcacccg aaaatccgta aatggaacat tgctttagtc ctgttaagtt cggctgtgct
     7081 gctcaacctg tgcttagcaa cgcgtctcga ttggacagca acgatcgggg cgtgaaactc
     7141 ctgaaagacg atgaccatgg gcgcacatca ggaactcagc cgcgccaatc tacgccagcc
     7201 gcctcccggg tcagccgcag gcgctcccgc ataacgcaat aggtgtattc ttagaattag
     7261 ctcggatcgc aaccaacagc atcttcggcc tacaatgaga ggtagtatga aggaactccg
     7321 cgagtcgcga gtgaattgga agctggaagg cgcaacactg gttttcgagc ggagaccagg
     7381 agtacaggag ggcgtttttg tctgctctgc gtgccgccag caactcgcga ccggtgatgt
     7441 ctttcacgca tttactacgt tttattccca ccgctgccga aagccacgca agttatccgc
     7501 ccttacggga agatagagcg cccttcctcc gtgcaacaca gtagaaccta gatccaatgc
     7561 atgatccgga attgtttttc tgggaaagct ctgccccgcg acttcgggtg acgatggggg
     7621 aaggcgaaac atgcgtcgcg gggcagcttg cgtgctcgag tgtgatgatt ccaacttaaa
     7681 tctgggattg gagcgcaaca agtgccgaga ggcgccagat atcacagcta tttttttatt
     7741 ggaggggcga aaacagagag ttaagtctgt gccgtgttgt gccactcgaa gtcgagtcac
     7801 ggcacagact tcatgcaagc agttagcgga tgagatgcat gatcatcgca gcgttactgt
     7861 gcgccatgag aaatattcga gagtggaagc agaatttgag agtagtgcgg ctcagctctt
     7921 cagggagatc agcgagatct caattgcggc gctcctgaag gcggattcac gtcttgagaa
     7981 ttccgcccca aggagagctg ataaactgct tgccacatca gatataactc ctgaaccacg
     8041 attcagaaaa gcgctgaagt gcgccagcgg ctcaggaccg ctctcgccag agttgctatc
     8101 cctgagcggc gcgggcttca gtacgcaaca cgtttttgcg gattttgccc gttgaagttt
     8161 ttggaagcgt ccgaaattct acgtacttag gacacttgaa atgagccagc cggctccggc
     8221 tgtattcgat cagctccgct ccggtggctg acttgccctc acgcaaggtg atgtaagcca
     8281 gaggaacctc gccccacttg ggatcagaga ctccgaccac ggccgcttcc aggaccgcgg
     8341 gatggtcgca aagcaccttc tccacttcca cggaagagat gttctctccg ccggagatga
     8401 tgatgtcctt gctgcggtcg cgaatctcga tgtagccgtt gggctgcatc acggcgagat
     8461 cgccggagtg gaaccagcct ccggcgaagg ctttctcggt ggcttcagga tcgttgaagt
     8521 agccggccat tacgttgttg ccccgcataa ctatctcgcc gatcgtctcg ccgtctttgg
     8581 gtacatcttt catctgctca tcgacgacgc gcacattcat tcccgtgacg acgtagccca
     8641 ctccctgacg agcgcgcagc gtggcacgct cggccagcgg caaagagttc cactggctct
     8701 gccaggcaca gatggtgtgt ggaccgtagg tttcagtcag gccatagacg tgggccacgg
     8761 aggcttccat ctcttcgacg gcgcggatta cggcaggcga aggcggcgcg ccggctgtga
     8821 cgatcttcag gcgatgtccg aacttgatgt tgttcacgcg gcaatactcg gtgagcatga
     8881 gcagcacggt tggcgagccg cagagatgtg tgacaccttc ctgctgaatc agttcgaccg
     8941 cacgcttggg atcgagatct ggcagacaga tgtggcgagc gcctactgaa gtcacggccc
     9001 aggggaagca ccagccattg cagtggaaca tgggcaaggt ccagagatag acggaggaat
     9061 gcgagattcc gtgctcgatc acttcgccca gagcgttcat gtaggcgccg cgatgcgtgt
     9121 acataacacc tttaggaata ccggtggtgc cgctggtgta gttgatggaa atcacgccgt
     9181 tctcttccgg ctccgcaccg tgaaacccag gatcgccctt gctgatgaaa gcttcgtaat
     9241 cgtcctcaat gcgctccagg gatttgagtt cacctttcac cgattcgagc ggcttgagca
     9301 ggtgcggttc gccgagcagc aggcgggctc cactgtggtt caggatggtc gcgatctctg
     9361 aagcgttaag gcgggtattc agcatgacca gcactgcccc ggcgagagca acaccgaaat
     9421 gacattccag tgcgggaatg cgattgcggg agagcatggc gacgcgatcg cccggcctga
     9481 tccccgtgcg ctggagagcc gaagcaagac gatggacacg ctctttgagt tcgccatagg
     9541 tgagacgctg atcgccttcg acaacggcca cgtagtcacg ataaaccgat ccgctgcgag
     9601 cgatgaaatc aagaggagta agcgttgaaa tcatagagac cgcctcaggc acgcgtatgt
     9661 ggggaggatg attctagcaa aatggcgcga atgcggctgt gatctgtgac caggtctttc
     9721 ggcgatgcca gcggctccgt tgcctgttga aggggtcagt ccggctattg ttctctggct
     9781 ccgaccacgc ggcgatatag ggccgccact tcgcccacga tgccgcgccg aaagatcagc
     9841 acgctgcaca cgaagatcac gccgatgatc actgtgacga acgggcctac tttatccgag
     9901 agctcgtttt cgagcgtcac aatggaaaac gcgccgacta caggcccgaa gaccgtaccc
     9961 atgccgccga gcagagtcat caggaccaca tcgcccgaag tgtgccagtc agagtcagtg
    10021 agcgtgacaa aggtaaagac cagcgctttt gtcgcgccag ccaggccgga gagagccgcc
    10081 gagagcacaa atgcgatgag cttgaagcgc tgcacgtcat acccaagcga gattgcgcgt
    10141 ggctcgtttt cgcgaatggc tttaagcacc tggccaaagg gagagttgat gatacgccac
    10201 gtcaaaaaca cgccagcaat gaagatggcc agcacgaagt aataaagctt gaggtcgttc
    10261 tccaggttaa tgacccagaa aaggcgtccg cgggggatcg cctgcaagcc atcttctccg
    10321 ccggtgaatg gcgcctggag gtaaagaaag aagatgagct gcgccagggc cagcgtgatc
    10381 atggagaagt aaattccctg gcgcctgatt acgagagtgc cgaacaacag cccgaggacg
    10441 ccagcggcta cggtgccggc gagaatgccc atggccggac caaaggaatt ctgcttgatc
    10501 aggtatccag taatgtagcc cgccgttccg aagaaggctg cgtggccaaa cgaaagcagg
    10561 ccggtgtagc cgaccatcag gttgaaggcg caggcaaaga gtgcgaagca gagggccttc
    10621 atcaaaaaga tgggatagac gacaaacggg gcaaccagcg ccgcgaccaa caaaaccgcg
    10681 catgccgcgt atttgaggaa gcgcggttct ttgggcgtcg gcgtcattta gcgctccctg
    10741 ccaaacagac cggcgggccg caacagcagg actacggcca tgatgaagaa gaccactgta
    10801 ttggaagcgg gtggatagta aaccttggtg aggccttcga tgagccccag agcaagtcca
    10861 gtgatgatgg agccacgaat tgagccaagg ccaccgatca caaccactgc gaataccacg
    10921 atgatgaggt tcgaccccat caacgggctg acctgcgtgg cgggcgcagc aataacaccc
    10981 gtaagccccg ccagcccaac gccgacggcg taagtaatgg tggtcatggc cggaacattg
    11041 atgccgaacg ccgacacaag ggaaggattc tcagtggcgg cgcgcaggta ggctccgagc
    11101 ggcgtctttt cgatgatcac ccaggtagtg aggcagacgc ccatggtgga aacgacgacc
    11161 cacactcggt acttgggcag gaacatgaag ccgagattta cggcaccctg caggcgatcg
    11221 ggaatgttgt agggcaggcc ggagacaccg tatttgtaac gcaggagtcc ttcgaagacg
    11281 agcgccagcc caaaggtgag cagcagaccg taaatcgggt caacgcgata gagacgccgc
    11341 aataggccgc gttcaacaat tgcgccgaag agagctagtg cgataggcac gatcagcagc
    11401 gcccaccagt agctgatctg gaactcgtcc agcaggaacc atgtggcgac ggcgcccagc
    11461 atgtaaaagg cgccatgggc aaagttcacg atatccagca tgccgaaaat gatcgagaga
    11521 cccaggctga gcatcgcgta aaagcagcca ttgccgagac caatcaccag ctgtccgtag
    11581 agcgcgttaa cgggtacgcc gaagatggtg gtcatgttcg tgagcagtgc tgcctcgtgt
    11641 ttgacgtgaa atgcgaatcc gctgccacca ttccgatcaa ccgtgagtga agcggcaagg
    11701 cagcagcggc atggataggc ttcttacttc ctgatctttt acttcttgat catgggacag
    11761 cgcgattccg aaagcggctg gaatgcctgg tcgccgggaa ccttgctgat gagcttgtaa
    11821 tagtcccagg gatacttgga ttccgcgggc gactttacct ggaacagata gaactcgtgc
    11881 accatgcggc cgtcttcgcg gatgtggccg ttcttcacga agtcgtcatt cagcgtggtt
    11941 gatttcagat tcttgatcac ggtgtcagca tcgtcagtgc ccgtggcttg aatagccttc
    12001 aggtactgca gcacagcgga ataaacgccg gcctgcgcca tgttgggcat cttcttcatc
    12061 ttggcgaaat attttttgcc gaggcgacgg gtgtcgtcgt tcatgtccca gtagtagcct
    12121 gaggccacgt acataccctg tgtggtctgt aaggtgaggg aattgatgtc cgtgatgaaa
    12181 accagcaggc cggccagagt ctgcttcttg ttgatgccga attccgaggc tgccttgatg
    12241 gcgttgatgg tgtcaccgcc ggcattggcg agaccgatta ccttggcacc tgaggcctgc
    12301 gcttgcaaaa gataggaaga aaaatccggc gcgttcagcg gatgcagaac ggaccccacg
    12361 accgttccac cggcggcctt cacagctttc gaggtgtcat cctgcaggga gtggccgaaa
    12421 gcataatcgg cggtgatgaa gaaccatgac tttccaccgt tctgcaccac ggcgcggccg
    12481 gtcacgccgc cggtggcgta ggtgtcgtag acataatgga tgatgtaagg gttgcagtct
    12541 tcgttggtga ggcgcgtgct tccggcattg ccgatcatga agagcttatg cttttccgct
    12601 gcgaccttgc tcacggcaat ggcgacgccg gagttcggca cgtcgacgat catgtcgacg
    12661 ccctgagtat cgaaccattc gcgcgcctta ttggcgccga cgtcagcctt gttctggtgg
    12721 tcagcataga cgagctgaat tggcttgccg aggaccttgc caccgaactc gtcaatcgcg
    12781 agttgagcgg cagtcacaga gccctggccg ccgatatcgg aataaaggcc ggacatgtcc
    12841 gtcaacaccg cgattttcac cacgtcgcct gatagtttgg gggccggctg cttgttttgt
    12901 gggaataccg ccatgccagc catcgcaacg attgaactac caacgatcct gatccatttg
    12961 cctttcatcg agttcctcct tggctcgtcc gtcttccttc ggctccaggc cggtctcaat
    13021 taaaccctca acagctcttc caatttttcc tgcttctcgg tcagctcgtc tttgccgacg
    13081 ctcatgacta tacgcccgcg ctccaccacg tacatgcggt cggccagtgc cgcggcaaag
    13141 cggaagttct gttccaccag gatcatggtg aagccccggg tcttgagctc agcgatggtc
    13201 ttgcggagcg tctgcacaat cactggtgcc agaccttcgg agacttcgtc cagcagcagc
    13261 aggcgtgcgc ctgtgcgcag aatgcgcgcc atggcgagca tctgctgctc gccgccggag
    13321 agcttgctgc cctggctgtg gcggcgttct ttcaactgag ggaacatgga gtagatttct
    13381 tctactgaca tgccctcgct ggagaggcgc ggagggagca ggagattctc ttccgcgctc
    13441 aggctggcaa agatgcctcg ttcttccggg cagtagccca ccccgaggcg tgcaatgcgg
    13501 taggccggcc aatgaacggt ttcccggccg ttgagcatga ccgatccgct gcgcttttcc
    13561 acgaggccaa gaatggcctt caacgttgtg gtgcggccgg agccgttgcg ccccagcaag
    13621 gtcacaagct caccacgatt gacgctgaaa tccatcccgt gcaggatgtg cgattcgcca
    13681 taaaaggcat gcaaattggt cacgcggagg tactcagccg cggatgagtt tccgttgcct
    13741 tcatgcgact cacccgctat ggccatcatg cttcgctacc catgtaggct tcacgaacct
    13801 gcgggttggc ggagacttcc gcgtagttgc cctccgccag caccgaaccg cgctgcagta
    13861 cggtgatgca ctggcagagg tccgcaacca cactcatgtt gtgctccacc atcaggatgg
    13921 tgcgatcagc agagagagtg cgaatgaggt ttttgacgcg gtcaacatcc tcatggccca
    13981 tgccctgcgt gggctcgtcc agaagaagga gttcgggatc gagcgcgagc gtggtggcaa
    14041 tctccagggc gcgcttgcgg ccgtaaggca gctccacggc cacgattttt gcctgagcct
    14101 ccagcccgac ttgcgcaaga agttcatggg cacgcgaatc caatgtgcgg agcgaagcgt
    14161 gactcttcca gaagtgatac tcgcttccaa gccgccgctg cagcgcgatg cgaacatttt
    14221 cgagcacggt gagatgaggg aagaccgcag agatctggaa ggagcggatg actccgcgcc
    14281 gggcgatgtc ggccggcttt tcacgggtga tgtcctggcc tttgaagaag atcgagccgc
    14341 gcgtaggctc caggaacttg gtcagcaggt tgaagcaggt ggttttgccg gcgccgttcg
    14401 ggccgatcat ggcgtgaacg gtacctttgc ggaccttcag gtttacgtca ctgacggcga
    14461 cgaacccctt gaattctttt acgagacccc gggtctcgag aatgtactcg gcatccattc
    14521 tggattcgat ggccctcacg gtttcacgca gccggaaagc ggcgcaaaga ggtagcggga
    14581 agcttaagac catgcttacg gagtgtcaag gcaagtcagc cggccatgcg ctttgcgttg
    14641 ggatgagcgt tctcaggcac gtccattgca cctttgcttc tggtgatgcg cggcagcaat
    14701 acccagacca gaccataaac ggagagggag atggcgagcc atgcggcgct gccggcgcgc
    14761 aggtcttcaa acagcagctt cagcgtgcag atggccatga gcgcgtagcc gaggggtagg
    14821 agttcaagcc gcacgtaacg tgacgcaaca aagccgcaac tgatggcgag caggcataag
    14881 aagaaggtac gaatcgtggc cgtcgcagaa gggttcgggg agacgagctg agacgtgacg
    14941 ctgatgaaca aaccgatgag ggctgcggcg cagaaaatgg caaaggagaa acgcaaggcg
    15001 cgatccacga aggctgagta cagtggggcg gcgagtttgc agaatgcgcc atagcagacg
    15061 atcgcggcga tcgcgacgat gacgactgtc aaagttgcag gctgcggctg ctcggcggct
    15121 accgaggcaa gggcgaacgt gacgaagccg gagctcatga gtgcgaccgc gagaaaggcg
    15181 agcgagtgtg cggcgagggt gacccgggag gtccgcacag cagcggcgat gctgaccagg
    15241 gcggcaaggc agagccaggc ggaagcggag tgagcggaaa agctcaagaa ggcgccataa
    15301 gtgagcagta ctgccgccca ggtggagaag acgtgatagt tgcgaaggag gcggtcttcg
    15361 tcgaaccagg taaaggcggc cagatagctc agagcggcgg acatgatgca gaatgcgccg
    15421 atccagagtt gcgctgcatc gtgcgtggcg cggagcgagc caagtgtgac gatcaggaat
    15481 gtgacagtag tttgaaagac ggagaagtac ttgatgggct gctgcctgac aatagtcgtg
    15541 aacagagtac tcgcggtgga aatcaggaac agcgcagcca tgaaacccag aagcgcggga
    15601 accgagatgt ggacgtagtc gggagagagt tcgcggctgg tgtagagcgc aagcagcatg
    15661 agcatgccaa cgtcagccgc cagggcagag atgacgcgag cggacagcca gtgtcccatg
    15721 gcgtaggcgc actccgcgga agaggtgatc agcaagacag caatggcaaa tggagccggg
    15781 tttccggtgc caacgaacaa tcccagcgcg gttatcacgg cgaagctggt agtgagccag
    15841 gcgacagcgg ccaggtcttt tctccacgcc acgaagaagg ccagcagcac gaagccgacg
    15901 agaatcgccg cggtaaaaaa cgagggtagg attttgaagc ggaccgtggc ttcccagagc
    15961 aaaggaaaca cgatcagtga ggcggtaacg ccgtaggcgc cgctggcaaa ccggaagttg
    16021 gagcgaccgg cccagaccag ccatccggcg gagtagagga gcgctgcgac ggccacggta
    16081 atctgcggca gcgcggcgga ttcggccagc gcgcgcagca catacgctcc ggcgagcccg
    16141 aggaagacct ttccgatcac cggcataacg ccggcagagc cgccggtggc gatctgctgg
    16201 agcgggtgcg aggcgggcag cggagtggga ttggcggcag gaacggggac ggagaagata
    16261 ttcatgttct ccggacgagc ggcatcacga acttcaaggg cggcaagccg cccttcaagc
    16321 tcctttatct tttcggcaag tcccttgatg agggatgcct gttgctcaag agaagggtcc
    16381 atcgccctct cctccgcgtt cggttgaatc gttcaggctc cggcgcgcgc cgaagtggcg
    16441 tgcgctgttt cttcagctcc ctcccacggt ggcagcagct tcaccagcac atacagaatg
    16501 gccagcggaa gcagcatgag agccaccgcg atcaggagtc cttcgcgggt gatcaactca
    16561 agtttgtagg tggtgtaacc gaggaagctc ttggagaaga gctgtccgcc gatcaccacg
    16621 ttccagcgca tggcgaagat gccgatcatt gtgaggcatc cggagagaac ataaatgcgc
    16681 ttccgccaga tctcgccgat gttcacgatc tgggtgagga agagcagccc aatcggcacc
    16741 acggtcccga ggacgatctg gatcacgatc tgcgagagat agagccgggt gtgtaccatg
    16801 aagtcgagcg aacggaacga ctcgtccgat tcgtagatgc ggtgaatcag gtccagcatc
    16861 tccaggctga aatcgat
//
LOCUS       DASQYP010000372         3961 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_17987, whole genome shotgun sequence.
ACCESSION   DASQYP010000372 DASQYP010000000
VERSION     DASQYP010000372.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 3961)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3961)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3961
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_17987"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            354..731
                     /gene="hypA"
                     /locus_tag="VE783_12180"
     CDS             354..731
                     /gene="hypA"
                     /locus_tag="VE783_12180"
                     /inference="COORDINATES: protein motif:HMM:TIGR00100.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008901 - ferredoxin hydrogenase activity
                     [Evidence IEA];
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase maturation nickel metallochaperone
                     HypA"
                     /protein_id="HYX54203.1"
                     /translation="MHELSVVLGIVQAVEESLSGRHISCVYTIRLKVGALSGVVEEAL
                     RFSYDVASKGTILDGSRLDVNHIPAVIYCDICSREVELPGVQDFSCPVCGTPSFHLRQ
                     GRELEIESLEIEEEEPTGDDANC"
     gene            712..1392
                     /gene="hypB"
                     /locus_tag="VE783_12185"
     CDS             712..1392
                     /gene="hypB"
                     /locus_tag="VE783_12185"
                     /inference="COORDINATES: protein motif:HMM:TIGR00073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0016530 - metallochaperone activity
                     [Evidence IEA];
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase nickel incorporation protein HypB"
                     /protein_id="HYX54204.1"
                     /translation="MTTRIVELRRGVLKKNDQLAAVLRERYQEAGAFVLNLVSSPGTG
                     KTAFLERTLRELRGRGARVAALVGDLETDNDARRLAASGAPVRQINTHGLCHLEAEMI
                     GNHLEGWTLSDIDYLFIENVGNLVCPSSYDLGESVRVALLSVTEGEDKPLKYPTMFNS
                     ADAAVITKIDLAEACEFDRELAHKNILQIRPGMKIFETSAKTGVGMDLWYAFLQEQHA
                     TRSIAAAQ"
     gene            1406..1687
                     /locus_tag="VE783_12190"
     CDS             1406..1687
                     /locus_tag="VE783_12190"
                     /inference="COORDINATES: protein motif:HMM:TIGR00074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HypC/HybG/HupF family hydrogenase formation
                     chaperone"
                     /protein_id="HYX54205.1"
                     /translation="MCLAVPGKVEEIFDDGCVRMGKVNFGGIVKTVCLAYVPEIVVGD
                     YAIVHVGFAISKIDEESALQTLQTYEELGVLEEELGEPTPVVKQVGKTD"
     gene            1735..2847
                     /gene="hypD"
                     /locus_tag="VE783_12195"
     CDS             1735..2847
                     /gene="hypD"
                     /locus_tag="VE783_12195"
                     /inference="COORDINATES: protein motif:HMM:TIGR00075.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016530 - metallochaperone activity
                     [Evidence IEA];
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase formation protein HypD"
                     /protein_id="HYX54206.1"
                     /translation="MKYLTEFRDGEIARKLAADIRAVVTRPWKIMEVCGGQTHSIIRN
                     GIDQLIPKEVEMVHGPGCPVCVTPLEIIDRALAIAALPGVIFCSFGDMLRVPGSSHDL
                     FRVKGEGGDVRIVYSPLDAVQIARQNPNREVVFFGVGFETTAPANAMAVDYAHRQGIK
                     NFSMLVSHVLVPPAIEAIMQSPGNQVQAFLAAGHVCSVMGYWQYPPLAEKFHVPIVVT
                     GFEPLDLLAGIRRAVIQLEKGQAYVENAYERVVTEQGNIPAQKLLAQVFEETDRPWRG
                     IGVIPRSGWRLREEYRDYDAEYKFKVFDIRSNESALCHSGDVLRGAIKPPQCPAFGKE
                     CTPRHPLGATMVSSEGACAAYYNYGRFISPEELTNA"
     gene            2840..3901
                     /gene="hypE"
                     /locus_tag="VE783_12200"
     CDS             2840..3901
                     /gene="hypE"
                     /locus_tag="VE783_12200"
                     /inference="COORDINATES: protein motif:HMM:TIGR02124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase expression/formation protein HypE"
                     /protein_id="HYX54207.1"
                     /translation="MPEGPDFSNWSCPLPLRDYPSIVIGHGGGGKLSAELVEHLFLPA
                     FRNEALAGLGDASVLSAMPGRLAFSTDSFVVRPLFFPGGSIGELAVNGTVNDLAVSGA
                     RPLYLSAGFILEEGLPLAELAKIVEQMAVAARNAGIQIVTGDTKVVEKGHGDGVYINT
                     AGIGTLVDGLQLGPALVRPGDALLVSGYIGDHGMAIMSVREGLEFETEIRSDCAALHE
                     LIADALRAGGGSIHAMRDPTRGGLASTLNEIAGSANVGVVIQEQMLPVRTEVQAACDL
                     LGMDPLYVANEGKVAIFVAAEAAEAVLDALRRHPLGRDAALIGHATEQHPRMVIAKTA
                     MGTNRVVPMQIGEQLPRIC"
BASE COUNT          810 a         1006 c         1316 g          829 t
ORIGIN      
        1 cggtaggcga gttcggtctg aaatccgttc cattgcaccc ggcgtgcaga atgcaattct
       61 gcctcagcag tcaagttccg cctaccatgg ggccggaacc acggatcagc atgcatgact
      121 aaattcccag aaattgcaaa ttgatataaa tcacatctcc gccagtacca agtgtgatat
      181 tcctctctga gaagtggaga tggcgggagt acaagatttc gcctgtcttg cctgcgcgac
      241 cgaaataggg agcattgaag tccttgtggt aagagcgcgg ctctcgatag ggttccctag
      301 cttcgctcgg gataaagccg acagcccatc tctggcttgg tctcagttct tctatgcatg
      361 aactttcggt cgtcctcgga atcgttcagg ccgtagagga gtcgctcagc ggccggcata
      421 tctcctgtgt ttacactatt cggctcaagg tgggggcgct cagcggggtg gtggaagagg
      481 cgctccggtt cagctatgac gttgccagca aaggcacaat ccttgatggt tcgcgacttg
      541 atgtaaatca catccccgcg gtgatctact gtgatatttg ttcccgggag gtcgaactgc
      601 cgggcgtaca ggacttttcc tgcccggtct gcggcactcc cagctttcac ctgcgccagg
      661 ggcgcgagct ggagattgaa agcctggaga ttgaggagga agagcccacc ggtgacgacg
      721 cgaattgttg agctgcgccg tggagtactg aagaaaaacg atcagcttgc ggctgtgttg
      781 cgcgagcgct accaggaagc cggtgcgttt gtgctgaacc tggtttccag tccaggcacc
      841 ggcaagacgg cgtttctgga gcggaccttg cgagaattgc gtggccgcgg cgcccgggta
      901 gcggcactgg tgggcgatct ggagacagac aatgatgctc gccgactggc cgcgagcggc
      961 gctccggtca ggcagatcaa cacgcacggg ctctgccacc ttgaagcaga gatgatcggg
     1021 aaccatctgg aaggttggac gctgagcgac atcgattatc tcttcattga gaatgtgggg
     1081 aatctggttt gcccatccag ttatgacctt ggtgagtcgg ttcgcgttgc gctgctttcg
     1141 gtaaccgaag gggaagacaa gccgctgaaa tatccgacca tgttcaactc cgccgacgcg
     1201 gcggtgatta cgaagatcga cttggccgag gcttgcgaat tcgatcgcga actggcgcac
     1261 aagaacatcc tgcaaatccg gccgggcatg aagatttttg agacttcagc aaagactgga
     1321 gttggaatgg acctgtggta cgcattcctg caggaacagc acgcgacgcg cagcatcgcc
     1381 gccgcgcagt aaaaaggaga gcccaatgtg tctggcagtt ccgggaaaag tggaagagat
     1441 atttgacgat ggctgcgtgc gcatgggcaa ggtgaacttt ggcggcattg tgaagacggt
     1501 gtgccttgcc tatgtccccg aaatcgtcgt aggcgattac gcgattgttc atgtggggtt
     1561 tgccatttcc aagatcgatg aagaatctgc gctgcagacg ctccaaacgt atgaggaact
     1621 aggcgtgctg gaagaagaac tgggcgagcc gaccccagtg gtcaagcagg tgggcaaaac
     1681 cgattgacca aagtgccaga ccatctccgc ggggcggagt gagaaggagc cgggatgaag
     1741 tacctcacag agtttcgcga tggcgagatc gcccgcaagc tggctgcgga catcagggcc
     1801 gtggttacgc ggccatggaa aatcatggag gtatgcggcg gccagacaca ttcgatcatc
     1861 cgcaacggga tcgaccagct cattcccaaa gaagttgaga tggtgcacgg gccaggctgt
     1921 ccggtgtgcg tgacgccgct ggaaatcatc gatcgcgcac tggcgatcgc ggctttgccg
     1981 ggcgtgatct tctgttcctt cggagacatg ctgcgcgttc ctggtagttc gcatgacctg
     2041 ttcagagtga agggtgaggg aggcgatgtg cggatcgtct actcgccgct cgacgcggtg
     2101 cagattgcgc gccagaaccc gaaccgcgaa gtcgtgttct tcggcgtggg ctttgagacc
     2161 actgccccgg ccaatgccat ggcggtggac tacgcgcatc ggcagggaat caagaatttt
     2221 tccatgctgg tgtcacatgt gctggtgccg cctgcgattg aggcgatcat gcagtctccg
     2281 gggaatcagg tgcaggcatt cctggctgcg ggccatgtgt gcagcgtgat gggttactgg
     2341 caatatccgc cgcttgcaga aaagttccat gtgccgattg tggtcaccgg atttgagccg
     2401 ctggatcttc tggcaggaat tcgtcgggct gtgatccagc ttgagaaggg gcaggcatac
     2461 gtggagaacg cgtatgaacg cgtggtgacg gagcagggaa atatcccggc gcagaagctg
     2521 ctggcccagg tcttcgaaga gactgaccgt ccatggcgag gcattggcgt gattccgcgc
     2581 agcggatgga ggctgcgcga ggagtatcga gactacgacg cggagtataa attcaaggtc
     2641 ttcgacatcc gctcaaatga atcagcgctt tgccacagcg gcgacgtgct gcgcggggcc
     2701 atcaagccgc cgcagtgtcc ggcgttcggc aaggaatgta cgccacggca tccgctgggc
     2761 gcgacgatgg tttcaagcga gggcgcgtgt gccgcttact acaactatgg ccgattcatc
     2821 tcccctgagg agctcaccaa tgcctgaggg gccggatttt tccaactggt catgccctct
     2881 gccgctgcgg gactatccga gtatcgtgat cgggcatggc ggaggaggga agctttcggc
     2941 tgagctggtg gagcatctgt ttctgccggc ctttcgcaat gaagcattgg caggactggg
     3001 cgatgcgtcc gtgctctcgg caatgccggg gcggctggcg ttttccacgg attcattcgt
     3061 ggtgaggcct ttgtttttcc ccggcggctc gatcggagag ctggccgtga atggcacagt
     3121 caacgatttg gcggtgagcg gggcgcgacc gctgtacctg agcgctggat tcatcctgga
     3181 agaaggtttg ccgctggctg agctggcaaa gatcgttgag cagatggcgg ttgcagcgcg
     3241 caatgccgga atccagattg tgaccggcga taccaaggtg gtggaaaagg gccacggcga
     3301 cggcgtctat atcaacaccg cgggcattgg gacgttagtg gatggcttgc agcttgggcc
     3361 agcgctggtg aggccgggag atgctttgct ggtaagtggg tacatcggcg accacggtat
     3421 ggcgatcatg agcgtgcgcg aggggctgga gtttgagacg gagattcgca gtgattgtgc
     3481 ggcgctgcat gagctgattg cagacgcttt gagagccggc ggcgggagca tccatgccat
     3541 gcgtgaccca acgcgtggtg gactggcttc aacgctcaat gagattgccg gatcggctaa
     3601 tgttggagtc gtcatccagg agcagatgct tccagtgcgt accgaggtgc aggccgcgtg
     3661 cgatctgctg ggtatggatc cgctatatgt tgcgaacgaa ggcaaggtgg cgatctttgt
     3721 tgcggcggaa gctgctgaag ctgtgctgga tgcgctgcgc cgccatccgc tgggacgcga
     3781 tgcggcactg atcggccatg ccaccgagca gcatccgcgc atggtgattg ccaagactgc
     3841 gatgggaacg aatcgtgtgg tgccgatgca gatcggggag cagctgccga gaatctgcta
     3901 ggctgcaaca accggggatt tcagcgcaaa ggacgcgaag ggcgcaatgg acttgtaggt
     3961 a
//
LOCUS       DASQYP010000373         4098 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_98660, whole genome shotgun sequence.
ACCESSION   DASQYP010000373 DASQYP010000000
VERSION     DASQYP010000373.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 4098)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4098)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4098
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_98660"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            324..1271
                     /locus_tag="VE783_12205"
     CDS             324..1271
                     /locus_tag="VE783_12205"
                     /inference="COORDINATES: protein motif:HMM:NF037417.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX54208.1"
                     /translation="MPQQKPASTTKHAAKLNRAKNRRERDFNDLNREEIIALVKKVAE
                     ELGHRPNQFEFWQAAKAKKEHVRRLFGSYRELVQEAGFEALGPGFHITPEQLFEDWVQ
                     VVRKTGRVPSVMQYNKLGRYSHRAFRTRWNSWQDVPAAMMEFAKEKWPDRQWDDVLAI
                     AQKYVEERKRKDPRKKKYQRLTSGGEALTTTDKALTSTGKKKGELGFGVCGRPVELRA
                     MLTHPVNEAGVLALFASMAVKLGFGILKVQTAFPDVIALRLCKDGQWRLVRIELEFES
                     RSFISHKHLPEGCDLIVCWKHNWPSCPVEVIELSKLFEE"
     gene            1667..2977
                     /locus_tag="VE783_12210"
     CDS             1667..2977
                     /locus_tag="VE783_12210"
                     /inference="COORDINATES: protein motif:HMM:NF012253.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX54209.1"
                     /translation="MFPNPQDTLPLPQHPDIEQYRKLAKELVEACRRGSNDAAIKQWA
                     TAWVQRVVKLAGIDFTPDQPVDVDRWTEQVSDFACHKLASAHGGKCSLAQAQFVIARA
                     HGFESWPKFIRELEELAHDKSAASAFDQAADAIVRGDAARLRDLLRDNPELVRERSRR
                     EHRATLLHYTSANGIEGYRQKTPANIVEIARILLDAGAEVDAVADVYGGGSTTLGLAA
                     TSVHPERAGVQEELMQLLLDRGATIEQVNIAGNNQSIVNACLANGRVAAAEFLAHKGA
                     PLDLEGACGLGRLDLVQKLVESTSGLDQEQLTRGFRWACGYRRNEVVDFLLARDPELG
                     TRPGASGETGLHRAGHEGHAEIVAAILQANRTGDVNIRDKQFHGTPLDWALHGWSENP
                     KRGDYYAVLRALIKAGARFHASEHRAELLARLRGDERMRELLGM"
     gene            complement(3401..3631)
                     /locus_tag="VE783_12215"
     CDS             complement(3401..3631)
                     /locus_tag="VE783_12215"
                     /inference="COORDINATES: protein motif:HMM:NF016167.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF433 domain-containing protein"
                     /protein_id="HYX54210.1"
                     /translation="MQRVNWSDCPLVEIDAARMSGRPVLKGTRMPVEDIIANYEFGVS
                     VSEISEQFRIPVETVKELLTYLERRQLLARPV"
     gene            complement(3818..>4098)
                     /locus_tag="VE783_12220"
     CDS             complement(3818..>4098)
                     /locus_tag="VE783_12220"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX54211.1"
                     /translation="SAASFQETTRVLTEASIQGAVDHLRGLKENVIVGRLIPAGTGME
                     FYRNVRLAPELEQAAQKVQEEVSQAYAEAERALELLRQEGEAEEMAAE"
BASE COUNT          928 a         1075 c         1280 g          815 t
ORIGIN      
        1 gattacaaag gcgaaataat tttgggttca gtttgtccgg gaggtggggg gtaaatcgca
       61 cagtatctac aggaggctaa aagaaccccg gcgggatcgg aaaaacctca ccactgatga
      121 cactgatctg actgatttcc actgatcgct cgaatcgaaa aaccgagcac cagcgctaaa
      181 gcgcttttct cttcgcaact tttcacggcc ataaatggcc gttcttccac cggctctcca
      241 cgctaaagct ggagaatcac aaaaaaccga aaaccttttg agccacccga tgcggtggct
      301 tttttatttt caggagaaag caaatgccac agcagaaacc tgcctcgaca acgaaacatg
      361 ccgccaagtt gaaccgtgcc aagaaccgtc gcgagcgcga ctttaacgat ttgaaccgtg
      421 aagaaatcat cgccctggtg aagaaagttg ccgaggagct gggacaccgg ccgaaccagt
      481 ttgaattctg gcaggcggcc aaggccaaga aagagcacgt gcggcggctg tttgggagct
      541 atcgggagct ggtacaggag gcgggatttg aggcgctggg gccggggttc cacattactc
      601 cggagcagtt gtttgaagac tgggtgcagg tggtgcggaa gaccggccgc gtgccttcag
      661 tgatgcaata caacaagctg ggccggtaca gccacagggc gtttcgtacc cgctggaaca
      721 gctggcagga tgttccggca gccatgatgg aatttgctaa agagaagtgg ccggaccggc
      781 agtgggacga cgtgctggcg attgcgcaga aatatgttga ggagcggaag aggaaagatc
      841 cgcggaaaaa gaagtaccag agattgacgt ctggcgggga ggcgttgacg acaacggaca
      901 aggcattgac gtcaacgggg aagaaaaaag gcgagctggg ctttggtgtg tgtggccggc
      961 cggttgagct gcgcgccatg ctcacgcatc cggtgaacga ggccggcgtg ctggcgctgt
     1021 ttgcgtcgat ggcggtgaag ctggggtttg ggatcctgaa agtgcagacg gcgtttccgg
     1081 acgtgattgc gctgcggctg tgcaaagacg ggcagtggcg gctggtgagg atagagctgg
     1141 agttcgagag ccgcagcttc atcagccaca agcacctgcc ggagggctgc gatttgattg
     1201 tttgctggaa gcacaactgg ccgagctgtc cggtggaggt aatagagctg agcaagctgt
     1261 ttgaagaata gcaattagta attagcaatt agtaattagc cggagcgggc caatttgccc
     1321 ttggcgaaaa ccttaccgct gatgacgctg attggactga tcctcactga tcagaaagaa
     1381 caaccatcaa ggacacgaat gagctgccac gaatgccaag aacctaccgc ggattggcgc
     1441 ggatgaacgc ggatgagaaa gaccttaccg ctgatgatgg cactgatttt cactgacttg
     1501 cccggtggca caatgtcccc cgtcctgcta agctcatggg tgcgcagaag ggcgcatcca
     1561 gtccgcggaa agggccgtgc ccacctcaaa aactttttct gaaggtacga accttctttc
     1621 agcctgattt gggcggactc caggcatgca gtgaaaggag cttcgtatgt ttcccaatcc
     1681 gcaggacacc cttccgctcc cgcaacatcc tgacattgaa cagtacagaa aactggccaa
     1741 agagctggtt gaagcctgcc gccgcggcag caatgacgcc gcaataaagc aatgggccac
     1801 cgcgtgggtc cagcgtgtag tgaagctggc gggaattgat ttcacgccgg atcagccggt
     1861 ggacgtggac cgctggacag aacaggtgag cgattttgcc tgccacaagc tggcaagcgc
     1921 gcacggcggg aagtgctcgc tggctcaagc gcagttcgtg atcgcgcgcg cgcacggctt
     1981 tgaaagctgg ccgaaattca ttcgcgagct ggaagagctg gcgcacgata aatcggcagc
     2041 gtctgctttt gatcaggcgg ccgatgcgat tgtgcgcggc gatgcggccc ggctgcgcga
     2101 tctgctgcgc gacaatcccg agcttgtccg cgaacgttcc aggagggagc atcgcgccac
     2161 actgctgcac tacacgtcag ccaatgggat tgagggctat cggcagaaaa ctcccgccaa
     2221 cattgtggag attgcccgaa ttctgctgga tgccggcgca gaagtggacg cggtggccga
     2281 tgtttatggc ggcggctcaa ccacgcttgg cctggcagct acgagcgttc acccggaaag
     2341 ggccggggta caggaggagc tgatgcagtt gctgctcgat cgcggcgcca cgatcgagca
     2401 ggtgaatatc gcgggcaata atcagtcaat cgtgaatgca tgcctcgcga acggtcgcgt
     2461 ggcggcggcg gaattcctgg cgcataaggg ggcaccgctc gatctggaag gcgcctgcgg
     2521 tctggggcgg ctggatctag tccagaagct ggttgagagt acaagcggtc ttgatcagga
     2581 acagctcacg cgtggcttcc gctgggcatg cggataccgc aggaacgagg tggtggattt
     2641 tctgctggca cgcgatccgg agcttggcac gcgaccaggt gcttccggtg aaaccggcct
     2701 gcaccgggcc gggcatgagg gccatgcgga gattgtggca gccatactcc aggccaaccg
     2761 cacgggtgat gtgaacatac gcgacaaaca gttccatggc accccgctgg attgggcgct
     2821 gcatggctgg agcgagaatc cgaaacgggg ggattactat gcggtgcttc gcgcgttgat
     2881 taaagcggga gcacgctttc acgcaagcga gcaccgagcg gagttgctgg caaggttgcg
     2941 tggggacgag aggatgagag aactcttggg gatgtgaccc gagagcttac cgcagatttg
     3001 cgcggataaa cgcggataga aaaacctaac cacgaagtcg caatgaacgg ggcgttccca
     3061 aacgagcatg aaaatggctc ttgagcgcta ccctttgttt tggtcgctcc gcttcgctgc
     3121 gcgacgggcc accggcgtaa ggaaataatt tgttgttctc ttacccagcc cttattcctc
     3181 agctcgctca cgctcgcctc ggaaccggac tgggctacta cattccgcgc cttccagcgc
     3241 tcggccgtcg cgagtgacag accttagtgc ctcccggttg catttacgat agagatcacg
     3301 aaggaccaag gcagaagcaa ccggacaaac ttctccgtgt tgttttgttt ctgtcgcggc
     3361 tgaattctgg tcagatcgaa tgcccaaggg aacatttttg tcaaacagga cgagcaagca
     3421 gttggcgcct ttcgaggtaa gtcagcagct ctttgactgt ttcaacgggg atgcggaact
     3481 gttctgaaat ctcgctaacg gaaacgccaa attcatagtt ggcgatgata tcttccaccg
     3541 gcatgcgggt gcctttgaga acagggcgtc cgctcatgcg ggccgcatca atttcaacca
     3601 acgggcaatc tgaccagttc acgcgctgca tggaattctc cctggccagc attctagccg
     3661 caaaaccgtg attcagagct gcagattagc atgggattta acaacaacac catactgtcc
     3721 tgcgaaatag ccgcaaaagc aacgggccag ctttcgccgg cccgttgggt gttttgattg
     3781 tagtgttccc tcgcgtacgc tcgggatgga aaacaaacta ctcggcagcc atctcttcgg
     3841 cttcgccttc ctggcggagc agttcgagag cgcgctcggc ttccgcgtag gcctgggaga
     3901 cttcttcctg gaccttctgc gcagcctgct cgagttccgg agccagccgc acgttgcggt
     3961 agaactccat gccggtgcct gccgggatga gccggccgac aatgacgttt tccttgagtc
     4021 cgcgcaggtg atcaacggcg ccctgaatgg aggcttccgt gagcacgcgc gtggtctcct
     4081 ggaacgatgc ggcggaga
//
LOCUS       DASQYP010000374        21677 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_58517, whole genome shotgun sequence.
ACCESSION   DASQYP010000374 DASQYP010000000
VERSION     DASQYP010000374.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 21677)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 21677)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..21677
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_58517"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..635
                     /locus_tag="VE783_12225"
     CDS             <1..635
                     /locus_tag="VE783_12225"
                     /inference="COORDINATES: protein motif:HMM:NF024423.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="HD domain-containing protein"
                     /protein_id="HYX54212.1"
                     /translation="WQSLPMQPIIDFILELEKLKGVTRKVKPLGLERYENSAEHSWSL
                     ALLAISLQHFAESPVDIDHVVRMLLVHDIGEIDAGDTIFFAETGHQERKAAERASVQR
                     IFGLLANGGNNGTGGHPQLHAIRETLLALWHEFDDAQTPESRFARAVDRAMPVLLNLN
                     NNGQSWRENNISYATVVKKVGPPIRAGCPALWTYIEARLEQARENGLFGA"
     gene            complement(1219..2604)
                     /locus_tag="VE783_12230"
     CDS             complement(1219..2604)
                     /locus_tag="VE783_12230"
                     /inference="COORDINATES: protein motif:HMM:NF045061.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX54213.1"
                     /translation="MMFSAIRRLVGQNQHKRTNRNHGLQLAAITAGLLLGSVNGHAQS
                     NNILSASNPSGVSATVSTTGSFDFNNPFFKSLGTNGRTCATCHQPAEGWGISAAGVQK
                     RFKSSNGTDPIFRAVDGANCPTNATLGDANSFTQLLNKGLIRIDRPLPGNAQFAIQVT
                     DDPYKCSTATDISVYRRPLPSTNLRFLSAVMWDTRETGGGKSIADDLVQQAIDATLGH
                     AQASAPPDLATAQAIRDFESALYTAQVFDNQAGILSADGANGGPIALSQQDFSAGLND
                     PFGAQFTPNIFTLFEKFNTATGNSNTDAARASIQRGEQLFNSLQIPISGVRGLNDAMG
                     MPVIMGTCGTCHNAPNAGSHSTQVAMDIGLTDASQRTSDQPFFTLINSTTGEVVQTTD
                     PGLAMVTGQWSDIARFKAPVLRGLAARAPYFHNGSAKTLNEVVDFYEKRFNLNLSGDK
                     KNDLAAFLATL"
     gene            complement(3222..4976)
                     /locus_tag="VE783_12235"
     CDS             complement(3222..4976)
                     /locus_tag="VE783_12235"
                     /inference="COORDINATES: protein motif:HMM:NF019351.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005507 - copper ion binding [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="multicopper oxidase domain-containing protein"
                     /protein_id="HYX54214.1"
                     /translation="MKKSRRDILKFGAIAGAGAMLPTIGVAQTPNTRVPTQGGVTFHG
                     HVSRPTSQLKTATNSGLLTQFVDQLPIMPVLRPDPNGVTHIRMLPALQKVHRDLPATP
                     IWGYNGAWPGPTIEVRSGVPVKIKYHNDALPTTHPLPVDFTIHGSEADKPQVRNVVHA
                     HGMKVMPESDGYPEAWISPDGITGPVLYNPDPFVYPNDQQSTLLWYHDHTLGITRLNM
                     IMGLAGAYIIRDAVEDSLNLPKGQFEIPLIIQDRLFNTDGTFLYPTAIGGTHQFWIPE
                     FFGDTICVNGKAWPVLDVEPRKYRFRMLNGCNARFLNMTLVQTDSKGNPHGMAGPAFF
                     IIGTDGGLLPAPVALTTLLHAPAERFDVIIDFTGRGGQTFVLKNNGPAPYPGGGEVVP
                     TEVMMFRVSKPLSSKDTSVIPSVLNPKPMNINPASATRTRDVVLTELDRASDGFPIIG
                     LLDNKNWDDPVTEDPKAGSTEIWNMINDTGDGHPKHIHLVQFQVLSRQPFDQNKFDTT
                     GQLNLLGQPQAPAPEEQNAYKDVVKAYPGTVTKLIMKFDMPTGAVIVPGQRYKYVWHC
                     HILEHEDNEMMRPMDVIG"
     gene            5481..6467
                     /locus_tag="VE783_12240"
     CDS             5481..6467
                     /locus_tag="VE783_12240"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX54215.1"
                     /translation="MPQSAYETELNPAEAAELPPGASAAPVSARVRALAAGQDFLQQA
                     LTRYSGRFLCGMPGGVLFLANTLSRINEIPGSLLSGELQVRTHELLDCLSEIGRMDGG
                     WGREASPDWSDCLATCWVITALEGSGSPVPDESYAFVRACQRWDGSFAASPATKQHRA
                     DSETALATTVTAVRVLREISPKTEEYLLQALPNAECLAIASYICAEVLDWPAGLASWQ
                     LLNNVSRFTGELSPHSPAQLSTLLRCLVRLRLQRSWPVAAQLRAQQQPNGSWTGPTAC
                     LGPVSQHAEPSILTAALSSASAISSLLIADAQPGLYFGSDVPARRFNQGWRR"
     gene            6593..7141
                     /locus_tag="VE783_12245"
     CDS             6593..7141
                     /locus_tag="VE783_12245"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HYX54216.1"
                     /translation="MEPNPFDASYLERLRNRDSETEAHFVNYFEKRLSAKLRAAGLYN
                     GDMYDARQETICRSLKKIYEEKVQLPERLGPFVFGICDNVILEFYRGEKDKWDHDGEI
                     PDLPDPREDAENVARHREHLEMVARVLSRVSDKERKILTAVFLHERDRDEICTEFRIT
                     REYLRLLLHRALESARKFMDIR"
     gene            7164..7859
                     /locus_tag="VE783_12250"
     CDS             7164..7859
                     /locus_tag="VE783_12250"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="zf-HC2 domain-containing protein"
                     /protein_id="HYX54217.1"
                     /translation="MTSPTMNHEQAVKSLATERYLLGEMAGDERKAFEEHYLECPVCV
                     EAVTFADEFLSAGAEAGQHQRVQPEPGWRERLVAWFKPLLNPLPALATIAVLVASLGF
                     NGWQAARVRTDEKTIAQLKAPREEYRFQIRGQSRSAAKVQVLRVPRQSQLRLEVEFTP
                     DPRFSEYRAELKSESGIVSSFRSDGKRNPIVVSVPAEALRPGPYTIVVTGFGDRGIEK
                     EAGDGIFDLQFTD"
     gene            8013..9014
                     /locus_tag="VE783_12255"
     CDS             8013..9014
                     /locus_tag="VE783_12255"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX54218.1"
                     /translation="MAKCSHHQYLYNASANGLSAEIERPVQQSVPAQAVCNLSSTGGR
                     GFQRVEKFCLPPFVCFDAAYSEVGGSFDECHNIHTTYAWSVIEGLNIADMVTADKVVS
                     RVVSYSPEEPDGHCNVDGEHSFDITGSYFENLRIAGRKIDLDLSTDLIHKHNTYSSFQ
                     QHYHPEASSANTGASPTAKGATNSGKKAAAAAGSQKRQSLLPWGELDKEGLRRLQDRE
                     KTYHALTGLSARAAAWANGGRAKSTAASAVNQPTNYRGAYLCSAAGHLDLSNSNSELE
                     NFGGIVLIPKFGIVRLAELTIHPDYRRLNMIRVQMCSGATGSGDGPTSGTGGTRPFP"
     gene            9359..11428
                     /locus_tag="VE783_12260"
     CDS             9359..11428
                     /locus_tag="VE783_12260"
                     /inference="COORDINATES: protein motif:HMM:NF024180.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CHAT domain-containing tetratricopeptide repeat
                     protein"
                     /protein_id="HYX54219.1"
                     /translation="MQQAAATLPTGRRDLHAEQAMMSGVCAMSQREEHKANDYFHRAI
                     ELGSNSDPFIAASALGNLGYMASQKGVYDRALTIFQQVLAVSDSPSIQEKAMGNIGES
                     YAQLGDFLSSVEYSRRAAELAGRLGRTDDQVAWLLNVGHSFMAMRESDSAENYLQQAL
                     SLARKLGDHDTESISLNNLVNLALGQHQVPKAEEYWREEGMVQGTSPRAKRYARVDEA
                     YLAAERKDYAREKSILDSLIRDSGVDPALHAVLLGKLAQLYVIQHKTVLAQQTFLRSI
                     DEAEGTRSKISEDYRISFLDESPFYDNYIRFLANQNKIAEALQVSERGRSLTLLEGLS
                     PENKRHSRINARNIQNYLKQNHQVVLTYWVTNDETLLWVVTPSHIKLFRLPGQASLYQ
                     QLGAANKEIQNRAQLPDSAEGQALYRALIAPAEKVIPRGSRVIVVPSRVLCLVDFEAL
                     VVPGPKPHYWIEDVEVENASSLSLLLLNRGKTGPAPEKELLLIGAPAEANKKDFPALP
                     HAAEEIQEIAPHFAAPARTVISGPNATPQSYFDSNPEQYRLIHFVSHGTANERNPLES
                     AIVLSPGKESYMLYAGQIMKRPIQADLVTISACYGAGLRWYSNESTVGLGWAFIRAGA
                     HHVIASLWEVDDEGTPDFMDHFYAKLTAGKRCAEALREVKLEMINSPGPHRHPYFWAS
                     LQLYAGS"
     gene            complement(11429..11869)
                     /locus_tag="VE783_12265"
     CDS             complement(11429..11869)
                     /locus_tag="VE783_12265"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX54220.1"
                     /translation="MLLTYKLVQLIEEHSEPLAAGLLERVKKSPFLPEYRNVPDAELK
                     QRVQEIYSHLGEWLTNGREQDIATRYTEIGARRAEQGVPLSQLIWTIVLVKENLWEYL
                     KHNARAEDLYELSSAHEMLQLLEQFFDRAVYYGAVGFETYKGKH"
     gene            complement(12062..12283)
                     /locus_tag="VE783_12270"
     CDS             complement(12062..12283)
                     /locus_tag="VE783_12270"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX54221.1"
                     /translation="MHIVRHPYHASIAPKPEVLKAEPLWHLVIRCEGAPDVLVRKDAV
                     SKEDAAAVALLEITRLQRASQSGQKRTAS"
     gene            complement(12471..14363)
                     /locus_tag="VE783_12275"
     CDS             complement(12471..14363)
                     /locus_tag="VE783_12275"
                     /inference="COORDINATES: protein motif:HMM:NF013126.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 3 N-terminal
                     domain-containing protein"
                     /protein_id="HYX54222.1"
                     /translation="MLRVKTCLLALVLSLLGSAKATDHFAKPGPVELTKEGRRWAEQT
                     LKKLTLEEKVGQLLSVRYFMDFENFESDAYRQFRDQMQKYHLGSVVLTVHVDGPSLLK
                     SLPLEAAAMSNQLQRDSKLPLLIAADFERGLGMRMSSVPIFPDAMAFGATGDPKNAER
                     FGAIVAEESRAVGVQWDFWPTADVNVNPQNPIINTRSYGEDPAAVGEFAAAFIRGARS
                     HGMLTSVKHFPGHGDTGTDSHLGVARVDADLARLQSVELPPFRQAIAAGADSVMVAHL
                     ATPALEPDQNKVATISSNVIQGVLRKQLGFEGVIVTDAMEMRGLTGLYSPQAGNPAGR
                     AAVDALKAGNDVLLLPSDLDGAYRGVLDAVRRGDLTEKRLDESVRRVLEMKASVGLNK
                     ARLVDLEQVSHMVSRQADLDFAQQVADQAVTIVRSNGKVIPLTELTPAKTENEFYPAP
                     ASSATQLVTIIISDNAHGAWGRNLELAIRSRRADATVFYVDASLATPLAGVILQAVKD
                     AGKVVVATYVSPVSGKQVTVNGKLVNSVGLQPAAADLLNQILEAAAAKTVVAALGNPY
                     IILNFPLIQNYVCSFSGQSSSELSVAKVLFGEMQPGGVLPITLPGVAERGMKSLTLAK
                     LPAVGR"
     gene            complement(14442..14669)
                     /locus_tag="VE783_12280"
     CDS             complement(14442..14669)
                     /locus_tag="VE783_12280"
                     /inference="COORDINATES: protein motif:HMM:NF042796.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6755 family protein"
                     /protein_id="HYX54223.1"
                     /translation="MSTRQSQGTTLFTALLALIGIGVVVQLWLLAATVDAVLRHESGT
                     PLHAAIGSAVVFAINAVLVLAVFNFDRRIKS"
     gene            complement(14670..15188)
                     /locus_tag="VE783_12285"
     CDS             complement(14670..15188)
                     /locus_tag="VE783_12285"
                     /inference="COORDINATES: protein motif:HMM:NF012575.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Rieske 2Fe-2S domain-containing protein"
                     /protein_id="HYX54224.1"
                     /translation="MAENEKDGCLACKKKTRWREDFPVEWESDNYITRREMVKFLALG
                     SLTIAGANFVLAGLPHLAKAAQLPRTRVALASSIPVGGSKLFSYPTQEDPCILVRQGN
                     GDLVAYSQVCTHLSCAVVHSEAENALFCPCHHGYFTVAEGRPYAGPPTRPLPRIKLEQ
                     QGNEIFAVGVEV"
     gene            complement(15191..15826)
                     /locus_tag="VE783_12290"
     CDS             complement(15191..15826)
                     /locus_tag="VE783_12290"
                     /inference="COORDINATES: protein motif:HMM:NF024644.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S dicluster domain-containing protein"
                     /protein_id="HYX54225.1"
                     /translation="MTNGAPVNSLGMEFYIDHSRCIGCRACMQACEECDTHRGVSMIH
                     LETIMRADSVQTAPQVCMHCEDPICAQVCPADAIKKTSDGIVQSSLKPRCIGCSNCVL
                     ACPFGVPKYKAEINQMMKCDMCYDRTSIGKRPMCATVCPSGALTFTTRENIEQTRQGM
                     AIREWQFGGEVVRTKVNVLVPRSVNRIDVTVEQIGRTQTDEYDVASLLAGD"
     gene            complement(15823..18045)
                     /locus_tag="VE783_12295"
     CDS             complement(15823..18045)
                     /locus_tag="VE783_12295"
                     /inference="COORDINATES: protein motif:HMM:NF012602.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-dependent oxidoreductase"
                     /protein_id="HYX54226.1"
                     /translation="MAKPPIAIPELVAAFGPKLNRTPVTGWTTHVEPDKLVKTHCCFC
                     GQQCGIQLKVKDNRVIGFEPWEDFPFNQGRLCPKGVKRYMQDEHPDRLKAPMIRKEGA
                     GFVPVSWDEALGKVAGEIQRIQQTYGNDAFALLGGASLTNEKAYLMGKFARVAVKTAN
                     IDYNGRLCMVSAAAASKKVFGIDRSANPWSDIPLAKAILVAGSNVAECSPITTHYLWQ
                     ARENGAKLIVLDPRMTPIARNADLYIPVRSGGDIGVFNGMLHVMIERGWIDREFIAQH
                     TTGWEQVEQIVSKYTPEYAAKIAGVPASMIVKAAEIWGPAPTSFLLHARGLEHHSKGV
                     LNCMAAINLVVASGRIGREGCGYAMITGQGNGQGGREQGQKCDQLPGGRDIENPEHRK
                     YIASVWGVPEESIPHKGLSMVPIFEAIHAGKIKGLMGISSNPMVSLPNNAYIREAFEK
                     LEFFCQVDFFLSETARYADVVLAGSLMEEDEGTTTNVEGRVIHLKKAVDPPGDARVDW
                     KIICDLAARLGAGEKFAFDSPREIFEELRVASKGGVSDYYGITWDRIDREMGVFWPCP
                     SPEHPGTPRLYEGARFNHPDGKAHFQPVEWKPAAEETDGKYPIILTTGRVVSHYLSGT
                     QTRRIGALVDQYPQPLCEMHPLLAAKLGIADGDFVKVESRRGSVTVRASVVKTIRPDT
                     VFVPYHWPLDRAANNMTVRALDPISNIPEYKICAVRVSKVPEPHDAIAELEVQAGGVR
                     "
     gene            complement(18055..19155)
                     /locus_tag="VE783_12300"
     CDS             complement(18055..19155)
                     /locus_tag="VE783_12300"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX54227.1"
                     /translation="MNQLQQQNGRTSTQTSEDVAHATGWGVAVAGLLLLGIFVGSNRM
                     RYFDAALVPYTGACVFTAFGIGYRFAMWLRRPSTRKYWFRGWQIFFRPKELPRNIARL
                     AQLFLADFVAQRFIEKRSHARWMAHWFIAWGCILAAAVTFPLSFGWVHFENAANNQEV
                     YRAFVFGVPVSTFHLNTVTAALTFNVLDISAVMVLFGVALALTRRTRDRGAISVQQFA
                     QDMMPLLMLFAISITGLFLTASTHLLHGLNYGFLSMLHAVTVIFTLLYLPFGKFFHIF
                     QRPAQIGVQFYKDYGARSEQAKCIRCGEAFASRMHVEDLKDVQRALGIHYELSNGGHY
                     QDVCPLCRRKSLAMAQDGKWREQGTRVAAGRN"
     gene            complement(19232..20428)
                     /locus_tag="VE783_12305"
     CDS             complement(19232..20428)
                     /locus_tag="VE783_12305"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nitrate/nitrite transporter"
                     /protein_id="HYX54228.1"
                     /translation="MNSSSNRSSSNLSNSLQLVLGTGAFALCFAVFGSVSAMMPVLKK
                     QFHLAPVQVSIAMAIPVLLGSLGRIPLGLLTDRFGGRKIFTWTMVASVIAALLMGRVQ
                     TYPELLVFGFFTGIALASFSVGVAFVSGWYSAERQGFALGVYGAGNVGQSLAAFGAPF
                     LFKYLGFRNTFWTFAALLAVWAAIFLLLAKDAPRITPPKSLGQMIRPLSDRMSWVLSF
                     FYFLTFGGFVAMGIYLPMFLTEIFKLTPQDAGMRTAGFVLLATAMRPVGGWLSDRVGG
                     LTILLWMFPLVTAMALLLTFESMVPFTAGALGMAAAIGLGNGAVFKLVPQYFPQSVGA
                     VTGLVGAMGGLGGFFPPLALGIIKQQTGSFVMGFALLGAFALVCMVVAKLTSSGRFQH
                     RAASVV"
     gene            complement(20533..20721)
                     /locus_tag="VE783_12310"
     CDS             complement(20533..20721)
                     /locus_tag="VE783_12310"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX54229.1"
                     /translation="MVTPLYVTAQSLSRNLRLRAQGALSLVDGAVELGTGELLVLEPG
                     VPHGVEALEEAAFVLTLS"
     gene            20829..>21677
                     /locus_tag="VE783_12315"
     CDS             20829..>21677
                     /locus_tag="VE783_12315"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX54230.1"
                     /translation="MKVHLSRPFKAAQFCLLGMIFIAGCAPNLFCQEAQPDSFDSIKP
                     APVLTGSTAYFSRVSGGQWQDAPSISPLLLFPIGNRLLLEAKGASTETWTKNAQGNYD
                     GTFTYGMAYAQLDYIANRYMTVTAGRFVTPFGIYSERLAPNWIRALQTTPLTSPVTST
                     SALGGMVRGGFPIDGQSVNLTYAAYFSANNTNHITATDRSSGGRLGFFLPGPRLEFGA
                     SYQQVLQADRPHSAGVYFEWQPNPAPLTLRSEYVRSSGIKGSGYWVESVYKLNQVSAL
                     KRLEVVG"
BASE COUNT         4655 a         6454 c         6062 g         4506 t
ORIGIN      
        1 tgtggcaatc tcttcccatg cagcccatta ttgacttcat cctggaactg gaaaagctca
       61 agggagtcac ccgcaaggtg aagccgctcg gcctggagcg ctatgagaac tcagccgagc
      121 acagctggag tctcgcgctg ctggccatct cactgcagca cttcgccgaa tcaccggtgg
      181 acatcgatca tgtcgtacgc atgctgctgg tgcatgacat tggcgagata gacgccggtg
      241 acaccatctt cttcgccgag accggccatc aggaacggaa agccgccgag cgcgcctccg
      301 tccagcgaat attcggcttg cttgccaatg gcggcaataa cggaacaggc ggccatcccc
      361 aactccatgc cattcgcgaa accctgctcg ccctgtggca cgagttcgat gatgcccaga
      421 cacccgaatc gcgctttgcc cgtgccgtgg accgcgccat gccagtgctg ctcaacctca
      481 acaacaacgg ccagagctgg cgcgaaaaca acatcagcta tgcgacggtc gtaaagaagg
      541 tagggccgcc catccgcgcc ggctgcccgg cattatggac ctacattgaa gcacgcctgg
      601 aacaagcgcg ggagaatggc ctgttcggcg cgtgagcaca ggttggccat aagacattgc
      661 ttcaaagcgc tgattgagaa aaaaatctca cctcagagcc acaaaagatg acgaaaggat
      721 tttgtttccg gcctttccct tcgtgctcct ttgtgacctc tctcgtaaat gcaaccggga
      781 agtgcaaaaa tctgtcactc tcgcgtagac gcaccgggaa ccactaggat ctgttacttg
      841 cctcgcacta gcgccgtctc tcgtaaatgc gaccgcaagc cactaaggtc tgtcactcgc
      901 gaaaacccga gcgccgtagg cgcgaaatag tgcaagccca gtccgtttcc gaggcgagca
      961 aagcgagctg aggaataagg gctgggtaag ctgcgggcga gaccactcct tactgccgta
     1021 ggccctcgcg cagcgaagcg gagcgacctg aacagcgcag tgaagcggag cgacctgaac
     1081 agcgcagcga agcgacctgc acaaagccga gcgcagcgga gcggcctgaa caaagcgcag
     1141 cgacctcaac ttcgcgctct ccgcctactc cgcgctgaat caaaaaaggg gacgcgcctg
     1201 cgccccctcc atcaggtttt acagcgtcgc caggaaagct gccaggtcat tcttcttatc
     1261 gcctgacagg ttaaggttga atcgtttctc gtagaagtcc acaacctcat tcagcgtttt
     1321 tgccgagcca ttgtggaagt acggcgcgcg cgccgccagt ccgcgcagca ccggggcctt
     1381 gaagcgcgca atgtcactcc actggccggt caccatggcc aggcctgggt cggtggtttg
     1441 cacaacctct ccggtcgtgc tgttgatgag cgtgaagaag ggctggtcag acgtgcgctg
     1501 gctggcatcg gtcaagccga tgtccatggc tacctgcgtt gagtggctgc cggcgttcgg
     1561 tgcattgtgg caggtgccgc acgttcccat gatcaccggc atgcccatcg cgtcattcaa
     1621 gccgcgcact ccgctaatcg ggatctgcag gctgttgaag agctgctcgc cgcgctggat
     1681 ggaggcccgc gccgcgtcag tatttgagtt gccggtggcc gtgttgaact tttcaaagag
     1741 cgtaaagatg ttcggcgtga actgcgcgcc gaatggatcg ttcaggccgg ccgaaaaatc
     1801 ctgctgtgaa agcgctatgg ggccgccatt cgcgccgtcg gcagaaagga ttcccgcctg
     1861 gttgtcgaac acctgagcgg tatagagcgc gctctcaaag tcgcgaatgg cctgtgccgt
     1921 cgccaggtca ggaggcgcgg aggcctgggc gtggcccagc gtagcgtcaa tcgcctgctg
     1981 caccaggtcg tcggcaatgc tcttgcctcc cccggtttcg cgcgtgtccc acatcaccgc
     2041 gctcaggaaa cgcaggttgg tggaaggcag cggccgccgg tagacggaga tgtctgttgc
     2101 cgtggagcac ttgtaaggat cgtccgtcac ctggatggcg aactgcgcat tccccggcag
     2161 cggacggtcg atgcggatca gccccttgtt caatagctgg gtgaaagagt tggcatcgcc
     2221 cagcgttgca ttcgtggggc agttggctcc atccaccgcg cggaagatcg ggtctgtccc
     2281 gttacttgac ttgaaacgct tctgcacgcc cgctgcggaa attccccatc cttccgcagg
     2341 ttggtggcag gttgcgcagg tgcgcccgtt ggtccccagg ctcttgaaga aaggattgtt
     2401 gaaatcgaaa cttcccgtag tgctcaccgt ggctgagacg cctgacgggt ttgaggccga
     2461 taaaatgtta ttgctctgtg cgtggccgtt tacgctcccc agcaacagcc ctgccgtaat
     2521 ggcagctagc tgcagcccat gattgcggtt cgtccttttg tgctggttct ggccaaccag
     2581 ccgccggatc gctgaaaaca tcatcctttt tctcccatcg aacggattct tgtggcgtgc
     2641 gctgcccgtg caaagcgggg aggaaagcaa gcgcgggtaa aacgctccgt atcgtagagg
     2701 aagagtgcgg catctgcgcg tctggttgaa tgcccaaggt gaaagcgcct tcagtaacca
     2761 gtgccgccta tatcggtttt caacttcgca aaaccggaac tttctcaaac ttatgttgca
     2821 gaggtgcatt cttcgtgctt acgccgccgc cgctggaggc acgcaaaaaa attcggccag
     2881 agatcttctt ctggccggta gtttgtgagg aaattttttg ctgctagccg aaaacaagcg
     2941 acataaaaat cgcggccccg caatacatca tttggggccg ctttttcata agcgggctca
     3001 tccgtttatt tctcgtatta cctcgtccca ggttcagcgg gatttgaggc agagcctgga
     3061 accgaagcaa ctaaacccgc ctagatttcc gggtaacgtg ccccctgctc gtgatgcaaa
     3121 cgcgcaggca ttacccggaa acgtgcaacc gcgaactacc ttccttacga tcaggccgga
     3181 acacgttcgc aagttccggc ctccccgctg atggctgctc gttaaccgat gacgtccatc
     3241 ggacgcatca tctcgttgtc ttcgtgctca aggatatggc agtgccatac gtacttgtag
     3301 cgctgtcccg gaacaatcac ggcgccggtc ggcatgtcga acttcatgat cagcttggtg
     3361 acggtccccg ggtatgcctt gaccacgtct ttgtaagcgt tctgttcttc cggtgccggc
     3421 gcctgcggct ggcccagaag gttgagttgt ccggtggtat cgaacttgtt ctggtcgaat
     3481 ggctggcggc tcagcacctg gaactgcacc aggtgaatgt gtttcggatg cccgtcaccg
     3541 gtgtcgttaa tcatgttcca gatttccgta gagccggcct tgggatcttc cgtgaccgga
     3601 tcgtcccagt tcttgttgtc cagcaatcca atgatcggga agccatcaga cgcgcgatcg
     3661 agttctgtaa gaaccacgtc ccgggtgcgt gtggctgaag ccggattgat gttcattggc
     3721 ttcgggttaa gcactgaggg aatcacgctg gtgtctttcg acgagagcgg cttggaaacg
     3781 cggaacatca tgacttccgt tggaaccact tcaccgccac ccggataagg agccggaccg
     3841 ttgttcttca ggacaaacgt ctgtccgccg cgaccggtga agtcaatgat cacatcaaag
     3901 cgctcggctg gagcgtgcaa caacgtggtc agagccacgg gcgcaggcag caggccgcca
     3961 tcggtgccaa tgatgaagaa tgccggaccc gccatgccgt gcggattgcc cttcgagtcc
     4021 gtctggacca gcgtcatgtt caggaagcgc gcattgcagc cattcagcat gcggaagcgg
     4081 tacttgcgcg gctcaacatc cagcaccggc cacgccttgc cattcacgca gatggtgtcg
     4141 ccaaagaact caggaatcca gaactggtgt gttccgccga tggctgttgg atagagaaac
     4201 gtgccatcgg tattgaacag ccggtcctgg atgatcagcg gtatctcaaa ctgacctttc
     4261 ggcaggttga gggaatcttc caccgcgtcg cggatgatgt atgccccagc cagccccatg
     4321 atcatgttca gccgtgtgat gcccagcgtg tgatcgtgat accagagcag ggttgactgc
     4381 tggtcgttgg gataaacaaa cgggtccgga ttgtagagca cggggccggt gattccgtcc
     4441 ggcgagatcc acgcttccgg atagccatcg ctctccggca tcactttcat gccgtgcgcg
     4501 tggacaacgt tgcgcacctg tggcttgtct gcctcagaac cgtgaatagt aaagtccacc
     4561 ggcagtggat gcgtcgtcgg cagcgcgtcg ttgtgatact tgatctttac cggcactccg
     4621 ctgcgcactt caattgtcgg accaggccac gcgccgttgt agccccagat gggcgtcgcg
     4681 ggaagatctc gatgtacttt ctgcagcgcc ggaagcatac gaatatgggt aactccgttc
     4741 ggatccggcc gcagcaccgg catgatcgga agctggtcaa caaactgggt gagcaggccg
     4801 ctgttggtgg ccgtcttgag ctgtgaagtg gggcgggaaa cgtgaccgtg aaaggtaact
     4861 ccgccctggg tcgggactcg agtattgggt gtctgggcaa cgccgatggt gggcagcatg
     4921 gctcctgctc cggcaattgc tccaaacttg aggatatcgc gtcgactctt tttcattgtg
     4981 aagtcttgct cctgtgggat ggaggcacac ttcaggcatg acaggcatgg gccggttgga
     5041 atccgtcgtc tgcttatcag cgccgaaggt gacgcctgat ctttccgagc ggcctaaaaa
     5101 aatccggaag aaggccgctc agagcgagta caaactagcc cgaaaaatag attagaaacc
     5161 acaaaattag agaatttaat tttcctggag tttacatcga agaatcagct ccttaatgcc
     5221 ggctcagcct gaacaatcgc aaagagtcat agccattgct ctttaaattg ataaccaata
     5281 agagcaccct tatttcgccg agcgcgctga tttcattagg atttttaatc ccagctactc
     5341 aggaagccca aaacacggtg gcgcagtccc actctgaaac gatttcccct cacggctcac
     5401 tcatcattgg gagcagaaat cgggggggag agcgaattgg gctcagcgtt ccccggttta
     5461 cctgaatggg agaaaaagaa gtgcctcaat cggcttacga gacggaactc aatccagcgg
     5521 aagctgccga gcttccgccg ggcgcttctg cagctcccgt ttctgcccga gtgcgtgccc
     5581 ttgcagcagg tcaggatttc ctgcagcaag cgcttacccg ttactccggc aggtttctct
     5641 gcggcatgcc cggcggcgtt ctctttctcg caaacacgct ctcccggatc aatgaaattc
     5701 ccggcagcct gctctccggc gagcttcaag tccgtactca cgagcttctg gattgcctct
     5761 ctgagatcgg ccggatggac ggtggctggg gtcgcgaagc gtcccctgac tggtctgatt
     5821 gtctggccac ctgctgggtc atcaccgcgc tggaaggctc cggctcgcct gtaccggacg
     5881 aaagctacgc tttcgttcgc gcctgccagc gatgggacgg aagctttgcc gcttccccgg
     5941 ccacaaagca gcatcgcgcc gactccgaaa ccgcactcgc aaccacggtc acagccgttc
     6001 gcgtcctgcg cgagattagc cctaaaacgg aagaatatct gctccaggcc ctgccgaacg
     6061 ccgaatgcct ggccattgcc agttacatct gtgctgaagt gctggattgg ccggccggac
     6121 tggcctcatg gcagctactc aacaatgtga gccgttttac tggagagctt tctcctcact
     6181 ccccggcgca actctccacc ttgctgcgct gcctcgttcg tctgcgcttg caacgctcct
     6241 ggcccgtggc tgcccaactg agggcgcagc agcagccaaa cggttcatgg acaggtccca
     6301 cagcatgcct gggcccggtg tctcagcacg ccgaaccatc aattcttacg gcggccctct
     6361 cgagcgccag cgcgatttcc agtttgctca tcgccgacgc gcagcccggc ctctacttcg
     6421 gctctgacgt tcccgcgcgc cgcttcaacc aggggtggcg cagatgacaa tcacaagttg
     6481 cactccgccg gccacaatag aacccctcct cgctggcttc tccgccgaca tcgagaagcc
     6541 ggatggcttt cggaacgttg taggggttgc agtatactgg gatgcgccta ccgtggaacc
     6601 gaaccccttc gacgcgtcgt atctggaacg gctcagaaac cgcgactccg aaacggaagc
     6661 tcacttcgtc aactactttg agaagcgcct ctctgcgaag ctgcgcgccg caggcctcta
     6721 caacggtgat atgtacgacg ccaggcagga aacgatctgc cgcagtctca aaaaaatcta
     6781 tgaagagaag gtacagttgc cggagcggct tggccctttt gttttcggca tctgcgacaa
     6841 cgtgattctg gagttctacc gcggagagaa agacaaatgg gaccatgacg gcgagatccc
     6901 tgacctgccc gacccccgcg aggacgctga gaacgtcgcc cgccaccgtg agcacctgga
     6961 gatggttgca agagtgctct cacgcgtgag tgacaaagaa cggaagattc tcacggcggt
     7021 gtttctgcac gaacgcgaca gggacgagat ctgcacagag tttcgtatca cccgtgagta
     7081 cctgcgcctt ctgcttcacc gcgccctgga aagcgcccgg aagtttatgg atatccgttg
     7141 attcggcaag aaatgaggaa gttatgacaa gtccaaccat gaaccacgaa caggctgtga
     7201 aaagccttgc cacggaacgc tacctgctcg gtgaaatggc cggcgatgaa cgcaaggctt
     7261 ttgaagagca ctacctggaa tgtcctgtgt gcgttgaagc tgttaccttc gccgacgagt
     7321 tcctgtcggc cggcgctgaa gctgggcagc atcaacgcgt tcaaccggag ccaggctggc
     7381 gtgaaagact cgttgcatgg tttaagcccc tcctcaaccc cctcccggcc ctggccacga
     7441 ttgccgtcct ggtcgcttcc cttggtttca atggctggca ggctgcccgt gttcgcaccg
     7501 atgaaaaaac tattgcccag ttgaaggctc cgcgtgagga atatcgtttt cagatacgag
     7561 ggcagtcccg atctgccgcg aaagtacaag ttttgcgtgt gccgcgccag agtcagttaa
     7621 ggctcgaagt ggagtttacc cctgatccac ggttcagcga atatcgcgcc gaactgaaat
     7681 cggaatctgg gatcgtgagt tcgttccggt ctgacggaaa gcgtaatccc atcgtggtct
     7741 ccgtgcccgc agaggcactc agaccgggac cttacaccat cgttgtgacc ggatttggtg
     7801 atcgcggtat tgagaaagag gcaggcgacg gcatcttcga cttgcagttc accgattaga
     7861 aagtttttag cattccgcgt ccgattttct aatcagcagg ccgcaagcag aagagtacaa
     7921 tccgttcaac caaagaaagc tctgtgctct ggctcctcta gctgattcca acggcagcaa
     7981 aacaaacttc attcggacat gcggagtaac taatggccaa gtgctcgcac catcaatacc
     8041 tctataacgc aagtgcaaac gggctctcag cggaaattga gcgcccggtc cagcaaagtg
     8101 ttcccgctca ggcggtttgc aatctctcca gcaccggcgg gcggggtttc cagcgcgtcg
     8161 agaagttctg ccttcctccc ttcgtatgtt tcgacgctgc gtattctgaa gtcgggggca
     8221 gcttcgatga atgccacaac attcacacga cttatgcctg gtcggtgatc gaaggactca
     8281 atatcgctga catggtaacc gcagacaagg tggtttcacg ggtcgtcagc tactcacccg
     8341 aggagccaga cgggcattgt aatgtcgatg gcgaacacag cttcgacata accggaagtt
     8401 atttcgaaaa cctcaggatt gcaggacgga agatcgatct cgacttgtcc accgatctca
     8461 ttcacaagca taatacgtat tcaagtttcc agcagcatta ccatcctgag gcatcttcag
     8521 cgaacactgg ggcctcccca accgcgaaag gagccacgaa ctcgggaaag aaagccgccg
     8581 ctgccgcagg ctcgcaaaag cgacagagtt tgcttccctg gggtgaactg gataaggagg
     8641 gactgaggcg ccttcaggat cgggagaaaa cctaccacgc gctcacaggc cttagtgctc
     8701 gggccgccgc atgggcaaat ggcggcagag cgaaaagcac ggcggcaagt gccgtgaatc
     8761 agcccacaaa ctaccgggga gcatacttgt gttcggctgc gggccatctc gatctcagca
     8821 attcaaacag cgagctcgag aactttggag gcatcgtact catcccgaaa ttcgggattg
     8881 tgcgtctggc ggaattgacc atccatccgg actaccgacg cctaaacatg atcagggtac
     8941 agatgtgctc cggagcaacc ggaagcggcg atggtcccac gagcggaacg ggtggcacca
     9001 gaccctttcc ataatcatca cgatttgcct gctgatcctg actgctggat gccagagccg
     9061 tcgctgggag aagctacagt ccgacgcgaa gcatcaagtt cgcgaaggat atctcctcaa
     9121 ggcgattgca gaggctgatc aagggctgcg ggaaacgggg aaatccccaa tctggaactg
     9181 gaagttcagg gttgtaaagg cggacgccct tgcccgaaac ggggaagcac aggctgcctt
     9241 ggatgttctg agtcctgagc ccccgtcttt tcttgatcct gaaacccgtg gccgcaggct
     9301 tgtcattctt ggcttggcat attgcagaaa aaatctcttt cgggaaggtg agtcacgctt
     9361 gcagcaggct gccgctactc ttccgaccgg gcgacgcgac ctgcatgctg agcaagcaat
     9421 gatgagcggc gtttgtgcca tgtcacagcg ggaggagcac aaggcaaacg attactttca
     9481 ccgcgccatt gagcttggct ccaactccga tccgttcatt gccgccagcg ctttgggaaa
     9541 tctcggttat atggcatcgc aaaaaggagt ctacgaccgt gctctcacga tcttccagca
     9601 agttcttgca gtctctgatt ccccgtcgat acaggaaaaa gccatgggaa acatcgggga
     9661 aagctatgcg cagttaggtg atttcctgag ctccgtcgag tactccaggc gggcagcgga
     9721 actcgccggg cgtcttggcc gcacagatga ccaggtggca tggctcctga acgtcggcca
     9781 ctcctttatg gcgatgcgcg aatccgacag tgccgaaaac tatcttcagc aggccctctc
     9841 ccttgcgcgc aagctgggcg atcatgacac tgagtctatt tctctcaaca atctcgtcaa
     9901 tctggctctc ggtcagcatc aggtcccaaa agctgaagag tactggcgag aggaaggcat
     9961 ggttcagggt acaagtccaa gagcgaaacg ttatgcccgt gtagatgaag cctacctcgc
    10021 tgccgaacgc aaggactatg cgcgcgaaaa gagtattctc gatagcttga ttcgcgattc
    10081 cggcgtagat ccagccctgc atgccgtact gctggggaag ctcgcacaac tctacgtcat
    10141 ccagcacaag actgttcttg cacaacagac tttcttacgc agcattgatg aagccgaggg
    10201 gacccgttcc aaaatctccg aggattaccg aatttcgttc ctggacgaat ctcccttcta
    10261 cgataattac attcgtttcc tcgccaacca gaacaagatc gccgaagccc tgcaggtatc
    10321 tgagagaggt cggtccctca ctctgctgga ggggctgtcg ccagaaaata agcgccattc
    10381 ccggatcaac gcccgcaaca ttcagaacta tctgaaacaa aaccatcaag ttgtccttac
    10441 ctattgggtg acaaacgacg agactttact ttgggtcgtc accccatcac acatcaagct
    10501 attcagactc cctggtcagg caagccttta ccagcagctt ggggccgcca acaaggaaat
    10561 ccaaaatcgc gcccagctgc cagattctgc agagggacag gcgctctacc gtgctctgat
    10621 tgcgcccgct gagaaggtta ttccccgcgg gtcacgagtg atcgttgtcc caagccgggt
    10681 gctttgcctc gtggattttg aggcgcttgt agttccaggg ccgaagccgc attactggat
    10741 cgaagacgtt gaagttgaga atgccagctc cctttcgctt ctcctgctga accgcggcaa
    10801 gacgggtccg gctccggaaa aggagctgtt gctgatcggg gcgcctgcgg aggcaaataa
    10861 aaaagatttc cccgcgttgc cgcatgcagc tgaggagatc caggaaatcg ccccgcattt
    10921 tgcggctccg gcccggaccg ttatttccgg tccaaacgcc acgccgcagt catactttga
    10981 cagcaatccc gagcaataca gactcatcca tttcgtttcc cacggcactg ccaacgaacg
    11041 caacccactc gagtcagcta ttgtgctttc tcccggcaag gagtcttaca tgctttatgc
    11101 cgggcagatc atgaaaagac cgattcaggc agacctggtc accatctccg cgtgctacgg
    11161 tgctggcctg aggtggtatt cgaatgagtc tacggtaggt cttggctggg cattcatcag
    11221 ggccggtgca catcacgtaa ttgcatcgtt gtgggaagtc gacgatgagg gtacccctga
    11281 tttcatggac cacttttacg cgaaactaac cgccggcaag cgctgtgccg aagctctgcg
    11341 cgaggtgaag ctggaaatga tcaactctcc aggtccacac cggcacccgt atttctgggc
    11401 gtcattacag ctgtatgcgg gttcctgatc aatgcttccc tttatatgtc tcaaacccca
    11461 ccgccccgta atacactgcg cggtcgaaaa actgttccag cagttgcagc atctcgtgtg
    11521 cgcttgagag ttcgtagagg tcctcggccc gggcgttgtg tttgagatat tcccagaggt
    11581 tttccttcac cagaacgatc gtccagatca gttggctgag tggcacgccc tgttcggccc
    11641 ggcgcgcgcc aatctcggta tagcgcgttg caatgtcctg ctcgcggccg ttggtaagcc
    11701 actcccccaa atggctgtag atttcctgga cacgctgctt cagctccgcg tcggggacat
    11761 tgcggtactc cggaaggaac ggcgacttct tcacccgctc cagcagtcct gccgccagcg
    11821 gctcagaatg ttcctcgatc agttgcacca gcttgtaggt gagtagcatt gccggaacct
    11881 ccagattgaa ttatctgttc cggccacagc gggagccgtg accaatatca catggggttc
    11941 tgagatcccc gaaaagcgaa gagtgggcag aagaaaagag cgggcaggcg gcccgctctc
    12001 ttgagtctct tcaataacgt ttaatgactt tactgcttgt atgaaggtat gaatggaatg
    12061 atcagcttgc ggtacgtttc tgcccagact gcgaagcccg ttgcagccgg gtaatttcca
    12121 gcaatgccac cgctgccgcg tcttcctttg aaaccgcatc cttgcggacg agaacgtcag
    12181 gagcgccctc gcagcgaatc acaaggtgcc acagcggctc tgccttcagt acctcaggtt
    12241 tgggagcgat gctggcatgg taaggatgcc gtacgatgtg catgggggtc ctctcaggcg
    12301 ttcaagggtc ttctatctat aaatattgtc tatggcgggt gggggctgct ttgttaaaaa
    12361 caggttaaaa tccgccccgt tgtgtggaaa aaccgcctgc aaccgccacg gggcattccg
    12421 acacaaacta atgaaaacaa aacacttata aatacaacta gccgagccgt tcaccgcccc
    12481 acagctggaa gtttagccaa tgttaaagac ttcattccgc gttcagccac gccggggagc
    12541 gtgatgggaa gaaccccgcc gggctgcatt tccccaaaaa gcaccttcgc cacgctcagc
    12601 tctgacgaac tctggcccga gaatgagcac acgtaattct gtatcaaggg aaagttcaga
    12661 atgatgtatg gattccccag cgccgccacc acggttttgg cagccgcagc ttccagtatc
    12721 tggttcagca ggtcggctgc ggcgggctgt agcccaacgc tgttcaccag cttgccgttg
    12781 accgtcacct gtttgcctga caccggagac acataggtgg caaccaccac ttttccggca
    12841 tctttcaccg cctgcagtat cacgcctgca agcggcgtag ccaggctcgc atccacatag
    12901 aacaccgtcg cgtctgcccg gcgggagcgg atggcaagct caaggttgcg tccccatgcc
    12961 ccgtgcgcat tgtcagagat gatgatcgtc accagctgag tggcgctgct ggccggcgcg
    13021 gggtagaact cgttttccgt cttcgcagga gtcagctctg taagcggaat taccttgcca
    13081 ttgcttctca caatcgtcac cgcctggtcc gctacctgct gcgcgaagtc cagatccgcc
    13141 tggcggctca ccatgtggga gacctgttcc aggtccacca gacgcgcctt gttcagccct
    13201 actgacgctt tcatctccag aacgcgcctc acagattcat ccaggcgctt ctctgtgagg
    13261 tcgcctcggc gcactgcgtc cagaacacca cggtaggcgc cgtcaagatc actgggcaga
    13321 agcagcacgt cattgccggc tttcagcgca tccacggcgg cgcggcccgc cggattgccg
    13381 gcttgtggcg aataaagtcc cgtcagccca cgcatctcca tcgcgtcggt cacaatcacg
    13441 ccttcaaatc caagctgctt gcgcagcacg ccctggatca cattggaaga gatcgtcgcc
    13501 actttgttct ggtccggctc aagcgcaggc gtggccagat gcgccaccat cacggagtct
    13561 gccccggcgg caattgcctg ccggaaaggc ggcagttcca cgctctgcag ccgcgccaga
    13621 tcagcatcca ctcgggccac gcccaggtgc gagtcggttc ccgtgtcgcc gtgcccggga
    13681 aagtgcttta cgctcgtcag catgccatgc gaccgggcgc cgcgaatgaa agccgccgca
    13741 aactctccca cggccgcggg atcttctccg taagaccgcg tattgatgat cgggttctgc
    13801 ggattcacgt tgacatccgc tgtaggccag aagtcccact gaacacccac ggctcgcgac
    13861 tcctcggcca cgatcgcccc aaatcgttca gcattttttg ggtcgccggt tgccccaaac
    13921 gccattgcgt ccggaaagat cggtacggag ctcatgcgca tgcccaatcc ccgctcgaaa
    13981 tcggcggcga tgagcaaagg cagctttgag tcgcgctgga gctggttgct catggcggct
    14041 gcttccagcg gcaggctctt aagcagtgac ggcccatcca cgtgtacggt caacaccact
    14101 gagccgagat ggtacttctg catctggtcg cggaactggc ggtaggcgtc actctcaaag
    14161 ttctcaaaat ccatgaagta gcggacgctc aacagctgcc cgactttctc ttccagggtg
    14221 agtttcttca gcgtctgctc cgcccagcgg cgtccttctt tggtgagctc caccggacct
    14281 ggcttggcaa aatggtcggt ggccttggca gaacctaaaa gagataagac gagcgccagc
    14341 aggcaggttt tcacgcggag catagatgaa agatagcaga gcctcagctc atcagggaga
    14401 cgcggcagaa attcatcgcc gaaaccacgg ttccaggagt gttacgactt gattcgccga
    14461 tcgaaattga agactgccag caccagcacg gcgttgatgg cgaaaactac cgctgagcca
    14521 atcgcggcat gcagcggcgt tccagattca tggcgaagga ccgcatccac cgtagctgcc
    14581 agcagccata gctgcaccac cacgccgatt ccgatcagcg ccagcagcgc ggtgaaaagc
    14641 gttgttccct ggctttgccg ggtactcatt tagacctcca cgcctacggc aaagatttca
    14701 tttccctgct gctccagctt tatgcgcggc agcggacgcg tcggaggccc cgcatacggc
    14761 cggccttccg ccacggtaaa gtaaccatga tggcacggac agaacagcgc attctctgct
    14821 tcgctgtgca ccacggcgca cgaaaggtgc gtgcaaacct gggaatacgc caccagatcg
    14881 ccattcccct ggcggaccag gatgcatgga tcctcttggg tgggatagga gaacagtttc
    14941 gagccgccaa ccggaatgga agaagcgagt gcgactcgcg tccgtggaag ctgcgccgct
    15001 ttggccagat gcggcagccc ggccagcaca aagtttgctc cggcaattgt cagcgagcca
    15061 agggccagaa acttcaccat ctcgcggcgg gtgatgtagt tgtcactctc ccattccacg
    15121 ggaaaatctt cgcgccagcg cgtcttcttt ttgcacgcaa ggcagccgtc tttttcgttt
    15181 tccgccatcc tcaatctcct gccagcaggc tggccacgtc atattcgtcg gtctgggtcc
    15241 ggccgatctg ctccaccgtt acgtcaatgc gatttacgct tcgtggcacc agcacattta
    15301 ccttcgtccg aaccacctcg cccccgaact gccactcgcg aatggccata ccctgtcgcg
    15361 tctgctcaat gttttcacgc gtcgtgaagg tcaatgcacc ggaagggcag accgtggcgc
    15421 acatgggccg cttgccgatg ctggtgcggt catagcacat gtcgcacttc atcatctggt
    15481 tgatctcggc cttgtacttg ggcacgccaa atgggcaggc aagcacgcag ttggagcagc
    15541 cgatgcaacg cggcttgagc gagctctgca caatgccgtc gcttgtcttt ttgatcgcat
    15601 ccgccggaca aacctgcgcg cagatcgggt cttcgcaatg catgcaaacc tgcggcgcag
    15661 tctggacact gtcagcgcgc atgatcgtct ccaggtgaat catggaaacg ccgcgatgcg
    15721 tgtcgcattc ctcgcaggcc tgcatacagg cacggcagcc gatgcaccgc gagtggtcaa
    15781 tatagaactc cattcccaga ctgttcaccg gggccccgtt ggtcatcgca ctcccccggc
    15841 ctggacttcc aactccgcaa tggcatcatg tggctccgga actttgctca cccgcacggc
    15901 gcaaatcttg tactccggaa tattcgaaat gggatcgagc gcgcgcacgg tcatgttgtt
    15961 cgcggcgcga tccagcggcc agtgatacgg aacgaaaact gtgtcgggcc ggatcgtctt
    16021 caccacgctg gcgcggaccg taaccgaccc gcggcggctc tctaccttca caaagtctcc
    16081 atccgcgatg ccgagtttgg ctgcaagcag cggatgcatc tcacacagcg gttgcggata
    16141 ctggtccacc agcgcgccta tgcggcgtgt ctgggtgccg gaaaggtagt gtgataccac
    16201 tcgccctgtc gtgaggatga tcggatactt gccgtcagtc tcctccgctg caggcttcca
    16261 ctccaccggc tgaaaatgtg ctttaccgtc aggatggttg aagcgcgcgc cttcatagag
    16321 tcgcggggtg ccggggtgct ctggtgaagg acacggccag aacacgccca tctcgcggtc
    16381 aatgcggtcc cacgttatgc cgtaataatc ggaaacgccg ccttttgacg ctacgcgcag
    16441 ctcttcaaag atctctcgcg gcgagtcaaa cgcaaacttc tctcccgccc cgagccttgc
    16501 ggccaggtca caaataatct tccagtccac ccgtgcatca cccggtgggt ccacagcttt
    16561 cttgagatgg atcacgcgac cttccacgtt ggtggtggtg ccttcgtcct cttccatgag
    16621 cgatcccgca agcaccacat cggcgtagcg ggcggtttcg gagaggaaga aatcaacctg
    16681 gcagaagaat tcgagtttct cgaatgcctc gcggatatag gcattgttgg gcagcgagac
    16741 catgggattg gaagagattc ccatgagacc tttgatcttc ccggcgtgga tggcctcaaa
    16801 gatcggcacc atggagagcc ccttatgtgg aatgctctcc tccggcacgc cccaaacact
    16861 cgcgatgtac ttgcggtgct cgggattttc tatatcgcgt ccgccgggga gttggtcgca
    16921 tttctgtccc tgctcgcgac cgccctgccc attcccttgc cccgtgatca tggcgtagcc
    16981 gcagccttca cggccgatgc gcccgcttgc caccaccaga ttgattgcgg ccatacagtt
    17041 caacacgccc ttgctgtgat gttcgagccc tcgggcatgt aacaggaagc tggtgggcgc
    17101 aggcccccag atttcagccg ccttcacaat catgctggcc ggcacgccgg cgattttcgc
    17161 cgcatactcc ggcgtgtact tgctgacgat ttgttccacc tgctcccatc cggtggtgtg
    17221 ttgagcaatg aattcgcggt cgatccatcc ccgctcgatc atcacgtgca gcatgccgtt
    17281 gaatacgccg atatctccgc ccgagcgcac cggaatataa agatcggcgt tgcgcgcgat
    17341 aggcgtcatg cgcggatcaa gaacaatcag ctttgcgccg ttctcgcggg cctgccatag
    17401 atagtgggtg gtgatcggtg agcattcggc aacgttggaa ccggccacca ggattgcttt
    17461 cgccagcgga atgtcactcc atgggttcgc ggagcggtcg atgccgaaaa ccttctttga
    17521 ggcagccgcc gctgacacca tgcacagccg gccgttgtaa tcgatgtttg cggtcttcac
    17581 ggccacgcgg gcgaacttgc ccatcaggta agctttttcg ttcgtgagcg aggctccgcc
    17641 cagcagtgca aaggcgtcat ttccataggt ctgctgtatg cgctgaatct cacctgctac
    17701 tttgcccagc gcctcatccc agctcacggg cacaaatcca gcgccttcct tgcgaatcat
    17761 tggcgctttc agccggtcag ggtgctcatc ctgcatgtag cgcttcacgc ctttaggaca
    17821 gaggcggccc tggttgaagg gaaaatcttc ccagggttca aagccgatta cgcgattgtc
    17881 tttcaccttg agctgaatgc cgcactgctg tccgcagaag cagcagtgcg ttttcaccag
    17941 cttgtccggc tccacgtgag tggtccagcc cgtcaccggg gtgcgattca gcttggggcc
    18001 gaaggctgcc accagttcgg gtatagcaat aggaggttta gccataaaaa aatctcagtt
    18061 ccgtccagcg gcaacgcgcg ttccctgttc gcgccatttt ccgtcctggg ccatggccag
    18121 cgacttgcgc cggcacaatg ggcacacatc ctgatagtgg ccgccgttgg agagctcgta
    18181 atgtattccc agtgcgcgct gcacgtcttt taagtcttcc acatgcattc gtgaggcaaa
    18241 cgcctcaccg cagcggatgc acttcgcttg ttcgctccgg gcgccgtagt ccttgtagaa
    18301 ctgaactccg atctgcgccg gccgctgaaa tatatgaaag aacttgccga acggcaggta
    18361 gagcaacgtg aagatcacgg tcacggcatg cagcatggag aggaagccat agttcagccc
    18421 atgcagcaga tgcgtggaag ccgtcagaaa gagcccggtg atcgaaatag caaagagcat
    18481 cagcagcggc atcatgtcct gcgcaaactg ctgcacggag atcgcgccgc ggtcgcgtgt
    18541 gcgacgcgtg agcgccagcg caacgccgaa caaaaccatc acggccgaga tatccagcac
    18601 gttgaaggtt agcgctgctg tcacggtatt cagatggaac gtggagacgg gaacaccgaa
    18661 gacgaaagcg cgatagacct cctgattgtt cgctgcattc tcaaaatgca cccagccgaa
    18721 tgagagcgga aacgtcacag ccgcggccag gatgcatccc catgcgatga accagtgcgc
    18781 catccagcgg gcatgcgagc gcttttcaat aaagcgctgc gccacaaaat cggcgaggaa
    18841 aagctgcgcc aggcgcgcga tattgcgtgg cagttcctta ggacggaaaa agatctgcca
    18901 tccccgaaac cagtacttgc gcgtggacgg tcgccgcaac cacattgcaa acctgtagcc
    18961 tattccgaat gccgtgaaga cgcatgcgcc ggtgtacggt accagtgccg catcgaagta
    19021 gcgcatgcga ttgctgccga cgaaaatccc aagcaacagc agcccagcca cagccacgcc
    19081 ccagccggtt gcgtgagcca cgtcttcgct ggtttgcgtg ctggtccttc cgttttgctg
    19141 ctgaagctgg ttcatgattt gtttcaatta tcgtaatacg atccaaagaa gcgcgtcgct
    19201 ctggctgtgg atcggacgcg gctcttcgcg cttataccac cgacgcagca cggtgctgaa
    19261 agcgtccgct ggaagttagc ttggccacga ccatgcacac cagggcaaac gcgccaagca
    19321 gggcaaagcc catgacgaac gatccggtct gctgcttgat gatgccgagc gccagcggcg
    19381 ggaagaagcc tcccagcccg cccatggcgc ccaccagacc ggtgactgcg cccaccgact
    19441 gcgggaagta ctgcggtacc agcttgaaca ccgcgccatt gccgagcccg attgccgcag
    19501 ccatgcccag agcgcccgcc gtgaatggaa ccatgctttc gaaggtaagc agcaaggcca
    19561 tggcggtaac cagcggaaac atccagagaa gaatagtgag tcccccgact ctgtctgaga
    19621 gccatccgcc aaccggacgc atggcggtgg ccagcagaac gaagcctgcc gtgcgcatgc
    19681 ctgcgtcttg tggcgtaagc ttgaagattt ccgtcaggaa catcgggaga tagattccca
    19741 tcgctacgaa gccgccgaag gtgaggaaat agaaaaagct gagcacccag ctcatgcggt
    19801 cgctcagcgg ccggatcatc tgcccaaggg attttggagg tgtaatccgc ggcgcatctt
    19861 tggccagcaa taagaagatc gcggcccaga ccgccagcag tgcggcaaag gtccagaagg
    19921 tgttccggaa tcccagatac ttgaataaaa agggcgcacc gaatgcggcc agcgattggc
    19981 ccacgttgcc tgcgccataa acgccgagcg caaaaccctg gcgctcagcg gagtaccacc
    20041 cgctcacaaa cgccacgccg acggagaagc tggccagggc aatgccggta aagaagccga
    20101 agaccagcag ctcgggatag gtttgcactc gtcccatgag cagcgcggcg atcactgacg
    20161 ccaccatggt ccaggtaaag atttttctgc cgccaaagcg gtcagtaaga agcccaagag
    20221 gaattcggcc cagactgccc agcaggacag ggatggccat ggcaatgctc acctgcactg
    20281 gcgcaaggtg gaactgcttt ttcaggaccg gcatcatcgc cgaaacggag ccgaatacag
    20341 caaagcacaa cgcgaaagcg ccggtgccaa gcaccaattg cagactattc gatagattgc
    20401 tgctggaacg attagaagaa gagttcatga tgagtcgaat ttaattatca aggccggaac
    20461 atggccgcca tgtgactaaa atcacagggc aaatgacaca cgaaccactt attctgggaa
    20521 ggcttttatg gattacgaca gcgtaagaac aaaggcagct tcctccagcg cctccacccc
    20581 gtgtggcacg ccgggctcca gcaccaacaa ctcacctgtg ccgagttcca cagctccgtc
    20641 caccaaggat aaagcgccct gtgccctcaa ccgcagattc ctgcttagtg actgcgccgt
    20701 cacataaagg ggcgttacca ttattactta tgtaatcttg gcgctgctct ccttatgaag
    20761 gtataaccgc aacataaatc caagcagtac agctatttag ccattcaagt ctggatttga
    20821 gagcagttat gaaagttcat ctttcgcggc ccttcaaggc tgcccaattc tgtctcctcg
    20881 ggatgatctt cattgccggg tgtgcgccga accttttctg tcaggaagcg cagccggaca
    20941 gctttgattc catcaagcct gcgcctgtgc tgaccggatc aacggcctac ttcagccgcg
    21001 tgagcggcgg acagtggcag gacgcccctt ccatcagccc actgcttctg ttcccgattg
    21061 ggaatcggtt gctgctggaa gccaaaggcg cttccaccga aacatggacc aagaacgcgc
    21121 agggcaacta tgacggcaca ttcacttacg gcatggccta tgcgcagctg gattacattg
    21181 cgaatcggta catgaccgtg accgccggtc gcttcgtgac accgttcgga atctacagcg
    21241 aacggctggc gcccaactgg attcgcgctc tgcagaccac cccgctgact tcacccgtga
    21301 ccagcaccag cgctctgggc ggcatggtgc gcggcgggtt tcccattgac ggccagtccg
    21361 tgaacctgac ttacgcggcc tacttttcag ccaataacac caaccacatt accgccaccg
    21421 atcgctcttc aggcggacgg cttggtttct tccttcccgg accgcgactc gagttcggag
    21481 cttcctacca gcaggtgctt caggcagacc ggccacattc cgccggcgtg tactttgaat
    21541 ggcagccgaa cccggcgccc ctgacgttgc ggtccgaata tgtccgctcg tccggcatca
    21601 aaggcagcgg ctactgggtt gaatcggttt acaagctgaa tcaggtctcc gccctcaaac
    21661 gcctggaagt ggtagga
//
LOCUS       DASQYP010000375         3860 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_58591, whole genome shotgun sequence.
ACCESSION   DASQYP010000375 DASQYP010000000
VERSION     DASQYP010000375.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 3860)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3860)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3860
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_58591"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..637)
                     /locus_tag="VE783_12320"
     CDS             complement(<1..637)
                     /locus_tag="VE783_12320"
                     /inference="COORDINATES: protein motif:HMM:NF013885.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX54231.1"
                     /translation="MTSTKAFTEKTAPQASGRRLGFVDRYLTVWILLAMVVGVALGRF
                     LPAATAAIGRFQSGTTNLLIAVGLVLMMYPPLAKVQYERLPEVFRNRKILGLSLLQNW
                     VIGPVLMFALAVTFLRGYPEYMTGLILIGLARCIAMVIVWNELARGDSDYAAGLVAFN
                     SVFQVLFYSVYSWLFITVLPPFLRLQGSVVKVSIGQIAESVLIYLGIPFFAG"
     gene            complement(658..1149)
                     /locus_tag="VE783_12325"
     CDS             complement(658..1149)
                     /locus_tag="VE783_12325"
                     /EC_number="1.20.4.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000140066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030612 - arsenate reductase (thioredoxin)
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="arsenate reductase ArsC"
                     /protein_id="HYX54232.1"
                     /translation="MKGIYNVLFLCTGNSARSILAEAIMNQKGRPHFMAYSAGSHPKG
                     AVHPGALAQLKRANLAVDGYRSKSWDEFGKPDSPRMDFVFTVCDNAASEVCPVWPGQP
                     ITAHWGVPDPAAVEGTDEEVQRAFHNAYLMLERRISLFLCLPLHKLDSLAIKKQVDEI
                     GRS"
     gene            complement(1167..2009)
                     /locus_tag="VE783_12330"
     CDS             complement(1167..2009)
                     /locus_tag="VE783_12330"
                     /inference="COORDINATES: protein motif:HMM:NF008823.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arsenite methyltransferase"
                     /protein_id="HYX54233.1"
                     /translation="MTEGIKEVVKSKYGEAARRVAAGESNSCCGAAACGTDIDPITRD
                     LYDDSETGLLPEQAIKASLGCGNPTALAQLNAGETVLDLGSGGGIDVLLSARRVGPTG
                     KAYGLDMTDDMLALARENQKKSGLENVEFLKGEIENIPLPDNSVDVIISNCVINLSGD
                     KDRVLREAFRVLKPGGRFAVSDVVVRGEVPEEIRRSILLWVGCIAGALSDTEYESKLK
                     NAGFEQIELEPTRVYNVEDARAMLAGHGVDVDAIALQVEGKFISAFVRAVKPAACCAP
                     GCCA"
     gene            complement(2025..2363)
                     /locus_tag="VE783_12335"
     CDS             complement(2025..2363)
                     /locus_tag="VE783_12335"
                     /inference="COORDINATES: protein motif:HMM:NF033788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metalloregulator ArsR/SmtB family transcription
                     factor"
                     /protein_id="HYX54234.1"
                     /translation="MPTAVQDVTRFADMLSAMGTEPRLRIVRLLLQSHPEGLVVGEIA
                     EELEIRNSTLSHHLEKLKNEELITVEREGTFLRYRANCEALQELLGFLFAECCTRNKA
                     IPPQKITCCR"
     gene            2564..>3860
                     /locus_tag="VE783_12340"
     CDS             2564..>3860
                     /locus_tag="VE783_12340"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX54235.1"
                     /translation="MHKLFRACSQRFALIVLLLSAAVAQYQKAPQPIHDLLDAPATPV
                     VLVSPTNNQLLVIDRLQYPPISDLAQPMLRLAGLRINPATNGRHHPPRLVGLSLVDVA
                     TGKSRKVTGLPPSPYLGVPQWSADGKQFAFTNTTPNGIELYVGETDKGAAHKVEGVQI
                     SAILGEPLQWMPDGKTLLVQAVPVSRGKAPADPKTPDGPIIQESDGKKAPVRTYEDLL
                     TDKHDEALFDYYATTQLKLLHVHEGKLGPVKASLGTESNVGKPAVFARVEPSPDGQHI
                     LVSRIVHPYSYIMPEGDFPREVEVWNLKGAVEHKVASLPLADHVPIEGVLTGPRDYEW
                     APMKPATLVWAEALDGGDPKAKAPFRDKLVMLTAPFNAEPVELVKLEQRFTPGGGFGG
                     GAGFGRGGIEWSESGIGLVRDYDRDRRWTRTFLVDINKHG"
BASE COUNT          806 a         1148 c         1172 g          734 t
ORIGIN      
        1 ttccggcaaa gaacggaata ccgagataga tgagcacgct ctccgcgatc tggccgatgc
       61 ttaccttcac cacgctcccc tgcagccgga gaaacggagg gagcacggta atgaagagcc
      121 atgagtagac gctatagaaa aggacctgaa acacgctgtt gaaggcgacc agcccggcgg
      181 catagtcgga gtcaccgcgc gccagttcgt tccagacaat caccatggcg atgcagcggg
      241 ccagcccaat caaaatgagg cccgtcatat attccgggta gccgcgcagg aatgtgaccg
      301 ccagcgcaaa catgagcact ggcccgatca cccagttctg caggagcgag aggccaagga
      361 ttttgcggtt gcggaacact tccggcagcc gctcatactg gaccttggcg agcggcgggt
      421 acatcatgag aaccagtccc acggcgatca gaaggttggt tgttccgctt tgaaagcggc
      481 cgatggcggc agttgcggcg ggaagaaagc ggcccagggc aactcccacg accattgcga
      541 ggagaatcca gacggtgaga tagcgatcca caaacccaag acgcctgcca ctggcctgcg
      601 gcgctgtctt ctcggtaaac gctttcgtgc tcgtcatcag gtttataagt cctcctctca
      661 gctccggccg atctcatcca cctgtttctt aatggccaga ctgtccagct tatgaagcgg
      721 aaggcatagg aacaggctga tgcggcgttc cagcatgaga tatgcattgt gaaacgcgcg
      781 ctggacctcc tcatccgtcc cttctaccgc ggcggggtca ggcacgcccc aatgcgcggt
      841 gatgggctgg ccgggccaga ccgggcacac ttcactcgcc gcgttatcgc ataccgtgaa
      901 aacaaaatcc atgcgcgggg aatcaggctt gccaaactcg tcccagctct tgctgcggta
      961 gccatccaca gccaggttgg cgcgtttcag ttgggcgagc gctccgggat gcactgcgcc
     1021 tttgggatgg ctgcccgcgc tgtacgccat gaagtgaggg cggccctttt ggttcatgat
     1081 ggcctcagcc aaaatggacc gggctgaatt cccggtgcag agaaagagca cgttgtaaat
     1141 ccctttcatg cgtgcggctc ctttggtcag gcgcaacaac cgggagcgca gcaggcggcg
     1201 ggcttcaccg cgcgcacaaa ggcgctgatg aacttgccct ctacctgcag cgcaatggca
     1261 tccacgtcaa ctccgtggcc tgccagcatg gcgcgggcgt cttccacgtt gtaaacccgt
     1321 gtgggctcaa gctcaatttg ctcaaagccc gcattcttca gtttgctttc gtactccgta
     1381 tcactcagcg caccggcaat gcagccgacc cacagcaaga tgctgcggcg gatttcttcc
     1441 ggcacctccc cgcggacgac tacatcggac actgcaaagc ggcctccggg tttgaggacg
     1501 cggaacgctt cgcggagcac gcgatcttta tcgccggaaa gattaatcac acagttggag
     1561 atgatcacgt caaccgagtt gtcgggcagc ggaatgtttt cgatctcgcc tttcaggaac
     1621 tccacgtttt cgagcccgga tttcttctgg ttctcgcggg caagggccag catgtcgtcc
     1681 gtcatatcta gaccataggc tttaccggtc gggccaacac ggcgggcgga gagcagcacg
     1741 tcaatgcctc cgccggaacc aagatcgaga acagtctcgc ccgcgttaag ctgggccagc
     1801 gctgtgggat tgccgcatcc gagtgaggct ttgatggcct gctccgggag caggcccgtt
     1861 tccgaatcat cgtagagatc gcgggtgatc ggatctatgt cagtgccgca ggcggccgcg
     1921 ccgcagcagg agtttgattc gccggccgcc acgcgccgtg cggcctcacc gtacttgctc
     1981 tttacaactt ccttgatacc ttccgtcatg aatactcctt caggtcagcg gcagcaggtg
     2041 atcttctgcg gtggaatggc tttattgcgg gtgcagcact cggcaaacag gaagccaagc
     2101 aactcctgca aggcttcaca gttcgcgcgg tagcgcagga atgtgccttc gcgctccacg
     2161 gtgatgagtt cttcattctt cagcttttcg agatgatgag acagggtgga attgcgaatc
     2221 tcgagttctt cggcgatctc gcccacaacc aggccctccg gatgggactg aaggagcagg
     2281 cgcacgatgc gcaggcgcgg ctcggtgccc atggcggaaa gcatgtctgc aaagcgggtg
     2341 acgtcctgga cggctgtggg cattgaagcc tcccgtattt ctacaataat agaaatatgg
     2401 aagaagtcaa gccttcgcaa cgcactccct cacgaaaaaa cccatgatgc gcaaaagcac
     2461 agccctgcgg agagggatca cagactgacg ccatttgagc cgatcatcgg aaacaaatac
     2521 acttttctgt tccaagatcg ccattcctgc ctgggggctc tccatgcata agctgtttcg
     2581 tgcctgctcg caaagatttg ccctgattgt tctattgctg tctgccgcag ttgcgcagta
     2641 ccagaaagcg ccgcagccca tccatgacct gctggacgcg cccgccacgc cggtggtgct
     2701 ggtgagtccg acgaataatc agctgctggt gattgaccgc ctgcaatatc cgccgatatc
     2761 tgatctggca cagcccatgc tgcggctggc cgggctgcgg atcaatccgg cgacaaacgg
     2821 acgtcaccat cctccgcggc tggtggggct aagcctggtg gacgtagcca ccggcaaatc
     2881 ccgcaaggtg accgggctgc ctccgagccc ctatctgggt gtgcctcagt ggtcggccga
     2941 cgggaagcag ttcgccttca ccaacaccac gccaaacggg attgaactct acgtcggcga
     3001 gacagacaag ggcgcggcgc acaaggtgga aggtgtgcaa atcagcgcca tcctgggcga
     3061 gccgttgcag tggatgcccg acggaaaaac gctgctggtc caggcggtac cggtgagccg
     3121 tggcaaagcg ccagccgatc cgaagacgcc agacggccca atcattcaag agagcgacgg
     3181 caagaaggcc ccggtgcgca cctatgaaga cctgctcacg gacaagcatg atgaagcgct
     3241 cttcgattac tacgccacca cgcagttgaa gctgctacac gtgcatgagg gcaagctggg
     3301 accggtgaag gcgagccttg gaacggagag caacgtgggc aagccggccg tttttgcccg
     3361 cgtggagcct tcgcccgacg ggcagcacat tctggtgagc cgcattgtcc atccttattc
     3421 ctacatcatg ccggagggcg atttcccgcg cgaagtggaa gtgtggaacc tgaaaggcgc
     3481 ggtggagcac aaagtcgcga gtctgcctct ggccgatcac gtgccgattg aaggcgtgct
     3541 caccggaccg cgcgattacg aatgggcgcc tatgaagccg gccaccctgg tgtgggcgga
     3601 ggcgctggac ggcggcgatc ccaaggccaa ggctccgttc cgcgacaagc tggtgatgtt
     3661 gactgcgcca ttcaacgctg agcccgttga gctggtgaag ctggagcagc gctttacgcc
     3721 cggcggcggt ttcggcggcg gcgcaggttt tggccgcggc gggatcgagt ggagcgagag
     3781 cggaatcggg ctggtgcgcg actacgatcg tgaccggcgc tggacgcgca ccttcctcgt
     3841 cgacatcaat aagcatggcg
//
LOCUS       DASQYP010000376         5403 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_164917, whole genome shotgun sequence.
ACCESSION   DASQYP010000376 DASQYP010000000
VERSION     DASQYP010000376.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 5403)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5403)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5403
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_164917"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..886
                     /locus_tag="VE783_12345"
     CDS             <1..886
                     /locus_tag="VE783_12345"
                     /inference="COORDINATES: protein motif:HMM:NF013706.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="fumarylacetoacetate hydrolase family protein"
                     /protein_id="HYX54236.1"
                     /translation="LLSMRSGASGDPRLGVKTDKGILDVTAAARLLKMHAPQTMDDLL
                     QNEDGPALMALVAAAQKSAAAKPAFLREETIQYAPLVNKPRKIICVGLNYRRHAQEIG
                     APIPKEPVLFSKYINTLNHHNGSIKLPVEVAKKFDYEIELVIVMGKKAKNVSEAESHS
                     YVAGYATGNDFTARDLQLETGGQWMIGKTPDQFAPLGPYMLTADLVDPDNLKLECRVN
                     GETRQSSNTNDMIADTKHCISYISRYITLEPGDIIFTGTPEGVILGKPKDQQVWLKPG
                     DKIACSVEKLGELKFELT"
     gene            997..1581
                     /locus_tag="VE783_12350"
     CDS             997..1581
                     /locus_tag="VE783_12350"
                     /inference="COORDINATES: protein motif:HMM:NF014667.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SCO family protein"
                     /protein_id="HYX54237.1"
                     /translation="MKLSALLAIFIVSICAHAQDTSATAAVPQIAPAQITVPDIQVVN
                     QAGKQVRFNSDVVKGRLAVVSGFFTTCTAFCPITQESLAHLQTALDKRMGRDVTFILV
                     SVDPANDTPERMKAWAEKFRLDANWTLLSGNPDDVAKIMKALGLYVDRPQRHQSAMMI
                     GNEKTGWQRVSSWSSTEKLVKIIDGLSTVHSASR"
     gene            1683..2705
                     /locus_tag="VE783_12355"
     CDS             1683..2705
                     /locus_tag="VE783_12355"
                     /inference="COORDINATES: protein motif:HMM:NF012770.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HYX54238.1"
                     /translation="MLLTIFIIVAIVIAAAALAQWICSRIDDRKFPAPGRLVKIDGAE
                     MHVVQMGQGLPPVVLEAGIAASTLNWSLLQPELAQSAATYSYDRAGFGWSRGKDVSCS
                     LARIANDLHAMLAALKVQQPYILVGHSFGGFIVREYAQRYADELAGLVMLDPLTPEEY
                     LNPDSAQRWKLRGGIWFSRAGAALASVGVIRASLWLLKRGRRRGPRAALAAFGPEATK
                     TVNRILGELLKLPPETVELIRARWCKPDYFLTMAGYIKSLPRCSAEVHGRNVPAEIPV
                     TVISGAHQKAERLREHAAIAAQSRYGRHLIADKGAHWVHLDAPELVLQAVRDIAALQA
                     QTQPVR"
     gene            2777..3496
                     /locus_tag="VE783_12360"
     CDS             2777..3496
                     /locus_tag="VE783_12360"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX54239.1"
                     /translation="MKKVVERERNKGYYRVLHVPLWIWAYWVLPGHLTADLYAHGPDR
                     RHWIWLAIVTAVCAWRGYVGRLPGCEQQPYITHYGEEKPNLWYRVFCYTTAWIDLLVP
                     FTINLLGLVINAFTGRYQIHELYAQLYYPIAGAIVMATILNMTPRARRSTRGEGEEKG
                     WFYVTVWTVVPTQLVGWAMWRLGKFFALSPTVLGDLRLASFLSAAAVFFFLGYIGKLP
                     RTQRYYVPKGTISDIEVSAGA"
     gene            complement(3692..4378)
                     /locus_tag="VE783_12365"
     CDS             complement(3692..4378)
                     /locus_tag="VE783_12365"
                     /inference="COORDINATES: protein motif:HMM:NF015639.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YkgJ family cysteine cluster protein"
                     /protein_id="HYX54240.1"
                     /translation="MLPPFFLHALFRAAALAYGGSMAFRPKGDAKLLQIVDAALAEAA
                     RKSGDWLSCRPGCTQCCHGPFPISQLDAARLRDGMAQLESNDRARAARVRSRADSYLT
                     RVKNNFPGDPETGVLGDDREAEARFEAFADDEPCPALDPETATCDVYAFRPMTCRTFG
                     PPVRSGPENGLGVCELCYHGATEAEIAACEMIPDPQNSELKLIAEAEKKSGVRGDTIV
                     AYCLRTSPRK"
     gene            complement(4413..4811)
                     /locus_tag="VE783_12370"
     CDS             complement(4413..4811)
                     /locus_tag="VE783_12370"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX54241.1"
                     /translation="MKRLLTLAFAGLFSLGLMAQTASQSAQSDDQSAKTDKNTAKAEK
                     KEAKAAEKGKDMSLTGWVKSDGGKTTFVNDKDKQSWDIANPDAVKGHEGHHVKVKAKL
                     DESNHSLTVDSLKMMKEKKQSAEKQKADKS"
     gene            complement(4947..>5403)
                     /gene="msrA"
                     /locus_tag="VE783_12375"
     CDS             complement(4947..>5403)
                     /gene="msrA"
                     /locus_tag="VE783_12375"
                     /EC_number="1.8.4.11"
                     /inference="COORDINATES: protein motif:HMM:NF013766.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008113 - peptide-methionine (S)-S-oxide
                     reductase activity [Evidence IEA];
                     GO_function: GO:0033744 -
                     L-methionine:thioredoxin-disulfide S-oxidoreductase
                     activity [Evidence IEA];
                     GO_process: GO:0006979 - response to oxidative stress
                     [Evidence IEA];
                     GO_process: GO:0030091 - protein repair [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="peptide-methionine (S)-S-oxide reductase MsrA"
                     /protein_id="HYX54242.1"
                     /translation="SAESGYMGGHVEKPTYQQVCNGDTGHVEVVRVNFNPEEITYRDL
                     LDIFFEIHDPTTLNRQGNDVGEQYRSVIFYMSPEQKSQAEEAIAELNKSRVWPTPVVT
                     KVEPAKEFFMAEDYHQEYYANNSFQPYCMFVISPKVKKFEKKFAERIRA"
BASE COUNT         1112 a         1445 c         1657 g         1189 t
ORIGIN      
        1 gctgctgagc atgcgttccg gagcaagtgg agatcctagg ctgggcgtga agactgataa
       61 gggaatcctg gatgtgacgg ccgcagccag gctgctgaag atgcacgcgc cgcagacgat
      121 ggacgatctg ctgcagaacg aagacgggcc ggcgctcatg gcgctggttg cggcggcgca
      181 gaagtcagca gcggcgaagc cggcattcct gagggaagag accattcaat atgccccgct
      241 cgtgaacaag ccgcgaaaga tcatttgcgt gggactgaac tacagacgcc acgctcagga
      301 gattggcgcg ccgatcccca aggagcctgt gctgttcagc aagtacatca acacactgaa
      361 ccatcacaat ggctccatca agctgccggt ggaggtggcg aaaaagttcg actatgaaat
      421 cgaacttgtg atcgtgatgg ggaagaaggc gaaaaacgtg agcgaggcag agtcgcactc
      481 gtatgtcgcc gggtacgcaa cgggcaacga cttcacggcg cgcgacctgc aactggagac
      541 cggaggccag tggatgatcg gtaagacgcc cgatcagttt gcgccgcttg gcccgtacat
      601 gctcacggcc gatctggttg atcctgacaa cctgaagctg gagtgccgcg taaacggcga
      661 gacccggcag tcttcgaaca cgaatgacat gatcgccgac acgaagcact gcatcagcta
      721 catctcgcgg tacattacgc tggagcccgg ggacattatc tttaccggca cgccggaagg
      781 agtaatcctg ggcaagccga aggaccagca ggtatggctt aagccggggg acaagattgc
      841 gtgcagcgtg gaaaagctgg gcgaacttaa gtttgagctg acttagggcg gcccgcgacg
      901 aacattaaag atgctcagga cgctgatttc agcttttttc cggcgaaaaa ttatgggatt
      961 atagcgtcac aagcagtacc caaacagacg acggatatga aactcagcgc ccttcttgcc
     1021 atctttattg tgtctatctg cgcccatgcg caagatacct ccgcaaccgc ggctgtaccg
     1081 caaattgctc ccgcgcagat caccgtgcca gatattcagg tggtaaacca ggccgggaag
     1141 caggtccgct tcaatagtga cgtggtgaag ggccggctgg ctgtggtttc cggatttttt
     1201 accacttgca cagcattttg cccgatcacg caggagagcc tggcacatct gcagaccgcg
     1261 ctggataaac gcatgggccg cgatgtgact ttcattctgg taagcgttga tccggcgaac
     1321 gatacgccag agcggatgaa ggcctgggcg gaaaaatttc gccttgacgc aaactggacg
     1381 ctcctcagtg gcaatccgga cgatgtggcg aagatcatga aggcgctggg gctctatgta
     1441 gaccggccgc agcggcacca gtcggcgatg atgattggca acgagaagac cggctggcag
     1501 cgggtgagtt catggtcttc caccgagaag ctggtcaaga tcattgacgg gctttccacc
     1561 gtgcattcgg cgagcaggta ggctgcagcg aatagccgcg acgtgccgca ccttgccgtt
     1621 cttatgggcg gatgatttcc ggttaaactc cagcatgaaa tcggtcgacc ggagatgact
     1681 ctgtgctgct gacaattttc atcatcgtag ccattgtgat tgccgcggcg gcgctggcac
     1741 agtggatctg ctctcgcatt gacgatcgaa agtttcccgc gccgggacgc ctggtgaaga
     1801 tcgatggcgc agagatgcac gtggtgcaga tggggcaggg acttccgcca gtggtgctgg
     1861 aggcggggat tgcggcttct acactgaact ggagtttgct acagccagag cttgcgcaat
     1921 cggcggcgac ttacagctac gaccgcgccg gatttggctg gagccgagga aaagacgtaa
     1981 gctgctcgtt ggcgcggatt gcgaacgatc tgcatgcgat gctggcagcg ttgaaggtgc
     2041 agcagcccta cattctggta gggcattctt ttggcggctt cattgttcgc gagtacgcgc
     2101 aacgttacgc ggacgaactg gctggattag tcatgctgga tccgcttacg ccggaagaat
     2161 atctgaaccc cgacagcgcc cagcgttgga agctacgcgg cgggatatgg ttttcgcgag
     2221 cgggagcagc cctggcgtcg gtaggtgtaa ttcgggcgag tctctggctg ctgaagcgag
     2281 ggcgccgacg cggaccgcgg gcagcactcg cggcatttgg tccggaggcg actaagactg
     2341 taaaccggat tttgggcgag ctgcttaagc tgcctcccga gacggtggaa ctgatccggg
     2401 cgcgctggtg caagccggac tactttttga cgatggcggg ttatatcaag tctttgccgc
     2461 gatgctcggc ggaagttcat ggacgcaatg tgcccgcgga aattcctgta acggtaattt
     2521 ccggtgcgca ccagaaggcg gagcgccttc gagagcacgc ggccatcgct gcacagtcac
     2581 gttatggccg ccacctgatc gcggacaaag gcgcgcactg ggttcatttg gacgcgcctg
     2641 agctggtgct gcaggctgtc cgtgacatcg ccgcacttca agcgcaaacg caaccggtgc
     2701 gctgagtcgc gcttcggcaa cgaggagcac aaatccaata caatgatgag aattatcccg
     2761 gagtgatttc attcgaatga agaaagttgt tgagcgtgag cgcaacaaag gttactaccg
     2821 cgtcctgcat gtgccgctat ggatctgggc atactgggtt ttaccgggcc atcttacggc
     2881 tgatctttat gcacacgggc ccgatcgccg ccactggatc tggctggcga ttgtaacggc
     2941 agtctgcgcg tggcgcggct atgttggccg cctgccgggc tgcgagcagc aaccgtacat
     3001 cacgcattac ggtgaggaga agccgaacct ctggtatcgg gtgttttgct acaccacggc
     3061 atggattgat ctgctggtgc cgttcaccat caacctgctg ggattagtga tcaacgcgtt
     3121 taccgggcgc taccagatcc atgagttgta cgcgcagctt tattacccga ttgccggcgc
     3181 gattgtgatg gcaactattt tgaacatgac gccgcgcgcg cgacgctcaa cgcgcggcga
     3241 gggcgaggag aagggctggt tctatgtgac ggtgtggacc gtggtgccca cacagcttgt
     3301 tggctgggcc atgtggcggc tggggaaatt tttcgcactg tcgcccacgg tgctgggcga
     3361 tcttcggctc gcttcgtttt tatcagcggc cgcggttttc ttttttctcg gctacattgg
     3421 caagctgccg cgaacgcagc gctattacgt tcccaaaggg acgatctctg atattgaggt
     3481 ctctgccgga gcgtagttgt tcttcgcccc cgaaaacgct tcccaggagg cgccgccgat
     3541 ggcgggttcg gtctttgaca actgaactat tgaaatcagg taatgtgctg tgagccgttg
     3601 gccgataaaa cgctcgttga tttgttgcag cgtacgagct aaatcctatg gccccgtgaa
     3661 ccgccgtgcg gctggaaccc gcgaggagta actattttcg tggggatgtg cgaaggcaat
     3721 atgccacgat ggtatctccg cgcacgccgg acttcttttc tgcctcggcg atcagcttga
     3781 gttcactatt ctgcggatcg ggaatcatct cgcaggcggc gatctcagct tcagtcgcac
     3841 cgtggtagca gagttcgcac actcccaggc cattttccgg gcctgaacgg accggcggcc
     3901 cgaaggtgcg gcaggtcatg ggacggaaag catagacatc acacgtggcg gtttcgggat
     3961 cgagcgcggg gcaaggctca tcgtcagcga atgcttcgaa gcgggcttcg gcttcgcgat
     4021 cgtcgccaag aacgccggtt tcagggtcgc cgggaaaatt attcttcacg cgcgtgaggt
     4081 aggaatcggc gcgcgagcga acccgggcag cgcgagcacg gtcatttgat tcaagctgcg
     4141 ccattccgtc gcgcaggcgt gctgcatcga gctgcgaaat gggaaaggga ccgtggcagc
     4201 actgcgtgca tcccggccgg cagctgagcc agtcgccact tttgcgcgcg gcttcggcga
     4261 gagctgcgtc aacgatctgg agcagcttcg catcgccttt gggccggaaa gccatacttc
     4321 caccatacgc gagagcagcc gcgcgaaaca gggcatgcaa aaagaaaggc ggaagcattt
     4381 cgcctccgcc cgcatttcaa tgagctgtga gtttagcttt tatcggcctt ttgtttctcg
     4441 gcagactgct tcttctcttt catcatcttc aagctgtcca cggtgagcga atgattgctt
     4501 tcatccagct tcgctttcac cttaacgtgg tgcccttcat gacctttcac agcgtcagga
     4561 ttcgcaatgt cccagctctg cttgtctttg tcattcacaa aggtggtttt gccaccgtcg
     4621 ctcttgaccc agccggtcag gctcatgtct ttgccttttt cggccgcttt ggcttctttc
     4681 ttttcggcct tggcggtatt tttatcagtc ttggcggact ggtcgtctga ctgggctgac
     4741 tggctggcgg tttgagccat taaacccagt gagaacagcc ctgcgaatgc gagcgtgagt
     4801 aatctcttca tggaatagtt ctccgttcga atcagaatca gacaaagttc ggcgcttcag
     4861 gtcttagatg cacgatttaa gggttgcaga gactcaggcg agcagttcac gtccgaagct
     4921 gccggacggg agctgcaggt gaatgatcac gccctgatcc gttccgcaaa cttcttttcg
     4981 aactttttta ccttgggcga gattacgaac atgcagtaag gctggaagga gttgttggcg
     5041 tagtactcct gatggtaatc ctccgccata aagaactctt tcgcgggctc cactttggtg
     5101 acgactggag tgggccagac gcgcgatttg ttcagctccg cgattgcctc ttctgcctgg
     5161 ctcttctgct ccggcgacat atagaagatc acggagcggt actgctcgcc gacgtcattg
     5221 ccctggcggt tcaaagtggt gggatcgtga atctcaaaga agatgtccag cagatcgcgg
     5281 tatgtgatct cctcgggatt gaagttgacg cgaacaacct ccacgtggcc ggtatcgccg
     5341 ttgcagacct gttgataggt gggtttttcc acgtgcccgc ccatgtagcc tgactcggcg
     5401 gac
//
LOCUS       DASQYP010000377         8901 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_141987, whole genome shotgun sequence.
ACCESSION   DASQYP010000377 DASQYP010000000
VERSION     DASQYP010000377.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 8901)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8901)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8901
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_141987"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            176..2572
                     /locus_tag="VE783_12380"
     CDS             176..2572
                     /locus_tag="VE783_12380"
                     /inference="COORDINATES: protein motif:HMM:TIGR03434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HYX54243.1"
                     /translation="MKDLRYGVRTLRRSPGFCLAAILTLALGIGANTVMFSVLDSVLL
                     QPLPYKHPDRLVQLYDTNTSRQAMQGPVSVYDLLDWQAQSRSFNHLATFEYESMALSG
                     EGDPQRVAALFVTPDFFNVFEAAPLMGRAFLPADSVPGKDHLVVISYRAWRRFFNQDA
                     HIVGRAITLDDEPYTVIGVMPVEFAFPAAGTQFWCLRAYKLDKFGRASHFLQAVGSLK
                     SGVTLREAQSEMDTIAERIAVQYPETNRGMGVRLVGLQDTVVGRYRTRLLVLWGAVVA
                     VLIIASANVAGLLLARAISRQKEIAVRIALGGSRGRLIRQFMTESMLLSVAGTGMGLL
                     LAALAGRALILASDGAVPRLTGFHLNLKVLAFTAVCGLFTAVLFGLAPAFHAVRRSMN
                     LSLKEGGTSSTNISDRLQLRSFLVSSELALCLVLLVSAGLLIRTLWRLEHVDPGFQTE
                     NILTFRISVPPAKYSDQQRRTELYKHMLENVAAIPGVESVGATNDLPFAGSRSGTSFQ
                     IEGQTLPPGQTLHTDYRIVSPDYMRTMGMKLLRGREFSEHDNRETQAVAVLNGALVQR
                     YFGGQDPLGKYIHISGQDIKYQVVGVIGNIKHQDLAAETYPEIYVSYLQAGPRMWTFV
                     ALRSRVEWSSLSKAVRHTVAEAVPGQPLYDMQAMADRVGYSVSGQRFTSLLLAIFAGL
                     ALVLSSIGIYGVMAHSVGQRTHEIGVRMALGADRSHVLKLIIRQAARIAIVGLSAGVL
                     GAFLTTRVLNSMLFGVSSYDPFTFSAVGLVLALVVMGAAYLPARRATLVDPVVALRCE
                     "
     gene            2769..3170
                     /locus_tag="VE783_12385"
     CDS             2769..3170
                     /locus_tag="VE783_12385"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX54244.1"
                     /translation="MSKSTTELSAFLKVLSSHVKQADEDLKGQNVPDQETLQELRQSL
                     DNLRMTAWTVSELMHARITDADARKLQAFLRAERVRRFHHMLADVIKDIDAQGMPGQS
                     TRLEALYDSVSLLQGRLIKLIRDRGPRAAGE"
     gene            3352..3714
                     /locus_tag="VE783_12390"
     CDS             3352..3714
                     /locus_tag="VE783_12390"
                     /inference="COORDINATES: protein motif:HMM:NF015898.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0045892 - negative regulation of
                     DNA-templated transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="BlaI/MecI/CopY family transcriptional regulator"
                     /protein_id="HYX54245.1"
                     /translation="MTEAELRLMEVLWEKGPASVHQVLQALPAKPALAYNSVLTTIRI
                     LEKKGYVQHLKDGRAHIYSPLVGREDASRSEIRNLVTRFFNNSHELLVLNLLEDKTLD
                     SQELERLRSLLQEKGADQ"
     gene            3714..5123
                     /locus_tag="VE783_12395"
     CDS             3714..5123
                     /locus_tag="VE783_12395"
                     /inference="COORDINATES: protein motif:HMM:NF017390.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M56 family metallopeptidase"
                     /protein_id="HYX54246.1"
                     /translation="MAFSPELNWIASAAVEKMIFCMAEGTLLAVAVWLGLRFTSGKSS
                     NTRFSILFSALLATAALPLFSWGTNSEFSGSGVSDSKVLTLPVAMATYGLLIWAAVAF
                     FGLARVVAGLVQIRNMRRKCRDCSADLLGPELKAELRDFSAVRRTRILLSDAATAPVA
                     VGFLRPAVILPAWLAEEGPSEELKHAVLHELEHLRRRDDWSNLLQKIVRAVFFFHPAV
                     WWLERELSLERELACDDAVVQRTGNSRAYAASLARLAERSFMRRQIAMAQALVGRVHQ
                     LTHRVTRMLDSSRPAGRAWRPAVPAVIGLALLSGVSTSWAPEMVRFADTTHTAKPNAA
                     GAEPISAEPISNESAAQVKTGAPSMTNARFVEPRVLQRKIPVAKQRVIPKRQMTPYVA
                     AKFVDRKPQGKLQTVHQLPHQPMSTPVVQAQQASEYVLVVATEQTITAGPHGYQVSVT
                     QLRMLVPKQQLQKAIPTKI"
     gene            5210..6781
                     /locus_tag="VE783_12400"
     CDS             5210..6781
                     /locus_tag="VE783_12400"
                     /inference="COORDINATES: protein motif:HMM:NF012318.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trypsin-like peptidase domain-containing
                     protein"
                     /protein_id="HYX54247.1"
                     /translation="MQKTWLSNNWKKGKTFVAVLALTLAVSLGGYELVRPEAARAANI
                     APAASALDDNSVSALTSLDKAMETLAARVTPAVVNVTVVSRNRGAQMRGRQQMQDQGQ
                     GDDQDQNDMQRFFGQFGFGPQMRQGPQIEHGLGSGIIISPDGYIVTNNHVVEGAVDLR
                     VTLNDRRVLPAKLIGADPLTDLAVIKVNANNLQSVPWGESSALKPGQSVLAFGNPFGF
                     RFTVTRGIVSALNRTNPYTDDPRKPGQFIQTDAAINPGNSGGPLVNAHGEVVGINTFL
                     ISPSGSFSGMGFAIPAQLARPIVNTLIKDGKVEHARIGVSINDVTPENATFFHLNEAT
                     GALVSQVEPDSPGAKAGLKVGDVITELNGKKVDDAGQLQALISQEKPGDKVNLAVFRD
                     GKNQTMPVTLEAMNPKNTMASNSGNSQGKPRWGVGLSDLTPDVRDELQLPTNVKGAVV
                     TNVQPGSPADNAGISRGDVIVEVDRHQVQSSQDVKRELGSVPTGKDALLLVWSNGGSS
                     FRVMHAAEAAQPAGE"
     gene            7064..>8901
                     /locus_tag="VE783_12405"
     CDS             7064..>8901
                     /locus_tag="VE783_12405"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX54248.1"
                     /translation="MSRIASRVCAGVLGLLLVPGLLFSADNNSANNNSAANGATNAAP
                     GAPAAPAAVPLDPLLRLMLAQGLVSQEEVAKLAGVPSSELRDRLLLLLLAKNKSALSA
                     ADLNALNAPANSAVAATDPAASADAVIDFGQASGPPQPPKTLPPSGPIPAVAPIRVMQ
                     VTPAKREGVIPVLAIGKNVHIQPYGFIKASAVYDTSSPYGNDFPLPGFIGDINGPDAF
                     PEFHIKARFIRIGSNFEWMDTPKVVVTGKIEGDFEGNFSRANNRNISSVRSNMFSFRV
                     GYGRIDWHTTDTTSLFFLAGQDWTPFASSTLPNLFETTGLGVGFGTTYERDPQFRVGL
                     NHKFSSSVSLSPEFAIVLPAFGNLPSNVADQLGFGERQGADSGKPEIQARLVTQFQLD
                     HAAGVAPAQIIVSGVHGQRTVTVLASAVPAAFKAAFPSGAQVSSDRNAWTGEIQLPTR
                     FATIIAKYYNGSDLRYYFANQLLSNFPNTTGLTGTATAPSVDGSSTVVFGNLAGVPTI
                     APQIPIRGQGGFVNIGLPFSRWANADPTGRNAGWVGYLHYGFDEALARDARRAGGGRQ
                     KSDVAAGTLQYKMNSFVTFVLEESYYRTRAIPLTSTGLFPLFQGRP"
BASE COUNT         1860 a         2476 c         2693 g         1872 t
ORIGIN      
        1 aagatccaat acattcgcgg cgagaaggcg gagcccgccg ccgtgtcggc tgcaccagaa
       61 aagccggccg aaagctagac cattcaaaaa cagattcttt ttgcagggcg acattcgctg
      121 aaaagcgaca tttccggagc cgttctggac taaaatctcg ctcatgcact ccttcatgaa
      181 agatctgcga tatggcgtgc gcacgctccg tcgctcgcca gggttttgtc tcgccgcaat
      241 tctgaccctg gcgctgggca tcggcgctaa tactgtgatg ttcagcgtgc tggattcggt
      301 gctgttgcag cctttgccct acaagcatcc tgaccgtctg gttcagctct atgataccaa
      361 tacatcgcgc caggcaatgc aaggaccggt ttctgtttat gatctccttg actggcaggc
      421 acagtcgcgc agcttcaatc atctggcgac cttcgaatat gaaagtatgg cgctttcagg
      481 cgaaggcgat ccgcagcgtg tggctgcact ctttgtaact cctgatttct tcaacgtgtt
      541 tgaggccgcg ccgctcatgg gacgggcgtt cctgcctgct gacagcgttc ccgggaaaga
      601 tcatctggtg gtgatcagct atcgggcctg gcgacgcttt ttcaatcaag acgctcacat
      661 tgttgggcgc gccatcacct tggatgacga accttatacc gtcatcggcg taatgcctgt
      721 tgagtttgca ttccctgcgg cgggtacgca gttctggtgc ctgcgcgcct acaaactcga
      781 taagttcgga cgcgcctccc atttcctcca ggcagtcggc agtttgaagt cgggcgttac
      841 cttacgcgaa gcacaaagcg aaatggatac gatcgcggag cggatcgcgg tccagtatcc
      901 agagacgaac cgcgggatgg gagttcgcct ggtcggtttg caggacactg ttgtcggcag
      961 atatcggacg cgcctgctgg tgttgtgggg cgcggtggtg gcggtgctga ttatcgcctc
     1021 tgcgaacgta gccggtctgc tgctggcccg cgccatttcg cggcagaaag aaatcgcggt
     1081 ccgcatcgcg ctgggcggca gccggggacg cctcatccgc cagttcatga cggagagtat
     1141 gttgctgagc gtggctggaa cgggaatggg attgttgctg gcagcgctcg cgggccgggc
     1201 gctcattctc gcaagtgacg gggctgtgcc acggttaacg ggctttcatc tcaatctgaa
     1261 ggtgctcgca tttacggctg tttgcgggtt gtttacggct gtcctcttcg ggcttgctcc
     1321 ggctttccat gctgtcaggc gcagcatgaa cttgtcattg aaggaaggcg gaacctcgtc
     1381 aacgaatatt tctgatcgcc tgcaactgcg cagctttctt gtgagctcgg aactcgcgct
     1441 ttgcctggtt ctgctggtga gtgccgggct gctgatccgg acattgtggc ggcttgagca
     1501 tgttgatccc ggctttcaaa cggagaacat cctcacgttc cgcatttccg tgccgccggc
     1561 aaagtattct gaccagcagc ggcgcacaga gctctacaag cacatgctgg aaaatgtcgc
     1621 ggcgattcca ggcgtggaat ctgtaggagc cacgaatgat cttccttttg ccggatctcg
     1681 ttccggaact tcattccaaa tcgaggggca gactctgccg ccagggcaga cgctgcatac
     1741 tgactatcgg atcgtgagcc ccgactacat gcgcaccatg ggcatgaagc tgctgcgcgg
     1801 gcgcgagttc agcgagcatg acaaccgcga aacccaggct gtggcggttt tgaacggcgc
     1861 tctggtgcag cggtactttg gcggacagga tccgttaggc aaatacattc atatcagtgg
     1921 ccaggacatc aagtaccagg tagtgggagt gatcggcaac ataaaacatc aggacttggc
     1981 tgctgaaacg tatccagaaa tttatgtctc ttacctccag gcagggccac ggatgtggac
     2041 tttcgtggcc ctgcgcagcc gggtcgagtg gagttcatta tcgaaagcgg tacgccacac
     2101 ggttgcggaa gccgttcccg gacagccgtt gtatgacatg caggcgatgg ccgatcgcgt
     2161 gggctactca gtctccgggc agaggttcac cagcctgctg ctggcaattt ttgccggact
     2221 ggcactggtg ctctcaagca tcggaatcta cggcgtaatg gcgcacagtg tgggccagcg
     2281 gacgcacgag attggcgtgc gcatggcgct tggggcagac agatcacatg tgttgaaatt
     2341 gattattcgc caggccgcga gaatcgcgat cgtgggactc tcggcgggag ttctgggtgc
     2401 ttttttgacc acgcgcgttc ttaacagcat gttgttcggg gtgagtagct acgatccctt
     2461 taccttctcg gccgttgggc tggtgctggc gctggtggtg atgggagcgg cgtatctgcc
     2521 ggcgagacgg gctacgctcg ttgatcccgt agtggcgctg aggtgcgagt agaccaacag
     2581 catctcatga ataggatatg tggctgatcc ggcagccgaa tagatgagaa agttttaacg
     2641 atcatctatt tttgggtacc aaagtgatgc gggaggactt tctttctgga tttccggcca
     2701 cgcatccttt atttaatctg taccatttaa tctgtaagtc acgcttccat ggaagttgag
     2761 cagtacgaat gagcaagagc acgaccgagc tttccgcatt cctaaaagtt ctttcctccc
     2821 acgttaaaca agccgatgag gatctgaaag gccagaatgt tcccgatcag gagacccttc
     2881 aggagttgcg ccagtcgctg gacaacctgc gtatgacagc atggaccgtc agcgagttga
     2941 tgcacgcccg catcactgac gctgatgcgc gcaagctgca ggcatttctg cgcgcggaga
     3001 gggtgcgtcg tttccatcac atgctggccg acgtaataaa ggacattgac gctcagggaa
     3061 tgccggggca gagcacccgc ctggaggcac tctacgattc ggtgagctta cttcagggaa
     3121 gactaatcaa gctgattcgg gaccgcggtc cgcgcgctgc aggggaataa caggtccggt
     3181 aaatcactga ctgttagaga cttcagtgtc ttcttgcctc agctttagtt ttccaattaa
     3241 aataaaacta aataattagt taccttttgg acgcgagctg cgtctaaggg attagcgacc
     3301 aaaataccag agaaggagca ggggagtttg cctccgcgta aatcgccgac attgacggaa
     3361 gctgagctga ggctcatgga agtgctttgg gagaaaggcc cagccagtgt ccatcaggta
     3421 ttgcaggccc tgcctgccaa gccggctctg gcctacaact ctgtgctgac tacgatccgc
     3481 atcctggaga agaaaggata cgttcagcac ctgaaagatg gtcgcgcgca catttattcc
     3541 ccgctggttg gccgcgaaga cgcgagccgc tcggaaatcc gcaacctggt tacgcgattc
     3601 tttaataact ctcacgaact tctcgtcctg aacctgctgg aggacaagac tctggactcc
     3661 caggagctgg aacggctgcg cagcctgctg caggagaaag gagccgatca gtgatggcct
     3721 tttctccgga gctgaactgg attgcctctg ccgcagtaga gaagatgatc ttctgcatgg
     3781 ccgaaggcac cttgcttgcc gtggcggtgt ggctgggcct gaggttcact tccggcaagt
     3841 cttccaatac acgcttctct atcctgttct cggcattgtt ggcgaccgcg gcgttgccgc
     3901 ttttctcatg gggcacgaac tccgaattca gcggctccgg agtgagcgac agcaaggttt
     3961 taactttgcc agtggcgatg gcgacttatg gcctcctgat ctgggcggcg gtggctttct
     4021 ttgggctggc gcgggtggtc gcgggattgg tgcagatcag aaacatgcga cgaaagtgca
     4081 gagattgttc tgctgatctg ctgggtccag agttgaaggc agagctcagg gatttttccg
     4141 ctgtccgcag gaccaggatt ttgttgtcgg atgcggcaac ggctccggtt gcggttggat
     4201 ttttgcggcc cgcagtaatt ttgccggcat ggctggcaga agaagggccg tcagaagaat
     4261 tgaagcatgc ggtgctgcat gaactggagc acctgcggcg gcgcgacgac tggagcaacc
     4321 tgctgcagaa gatcgtaagg gctgttttct tcttccatcc ggccgtgtgg tggctggagc
     4381 gggagctttc ccttgagcgc gaactggcct gtgacgacgc ggtggtgcag cgcacaggga
     4441 acagccgggc atacgcggcg agcctggcgc ggcttgccga acgcagcttc atgcgccggc
     4501 aaattgcgat ggcccaggcg ctggtcggtc gggtgcacca gctcacccat cgcgtgacgc
     4561 ggatgctgga tagcagcaga ccagcaggga gggcctggag gcctgcagtt cccgcagtga
     4621 ttgggttggc gctgctctca ggggtctcca catcttgggc gcctgagatg gtccgattcg
     4681 cggacacgac tcatactgca aagccgaatg ccgcaggggc agaacccata agcgcagaac
     4741 ccataagcaa cgaatcagca gcgcaggtga agaccggagc gccgtcaatg acgaatgcgc
     4801 gttttgtaga accgcgcgtg ctacagcgca aaattccggt ggcaaagcag cgggtgattc
     4861 ctaagcggca gatgacgccg tacgtcgcgg ccaagtttgt tgatcgcaaa ccgcagggca
     4921 aactccagac agtgcatcaa cttccgcatc agccaatgag cactccggtg gtgcaggcgc
     4981 agcaggcgtc tgagtatgtt ctggtggttg ctacggagca gacgatcacc gcgggtccgc
     5041 atgggtatca ggttagcgtc acacagctcc gcatgctggt gccaaagcag caacttcaaa
     5101 aagcaattcc gacaaaaatt tagcaagaca taaccctgcc gcgtgatagc ggcaggcaaa
     5161 aaagcactca gtaaaactaa atctttagtt gatagcagga gcaggaaaaa tgcagaagac
     5221 gtggttaagc aacaactgga aaaaaggcaa gacgtttgta gccgtactgg cgctgacgct
     5281 ggcggtctca ctgggcggat atgaactggt tcgtccagag gcggcacgcg cggccaacat
     5341 agcgccggcg gcctcggcgc tggacgataa cagcgtgagc gcgctgacat cgctcgacaa
     5401 ggcgatggag acgctggcgg ctcgcgtaac tccggcagtg gtgaacgtaa ctgtggtctc
     5461 gcgcaatcgt ggcgcgcaga tgcgcgggcg tcagcagatg caggaccagg gacagggtga
     5521 tgatcaggac cagaacgata tgcagcgctt cttcggccag ttcggtttcg gaccgcagat
     5581 gcgccagggc ccgcagattg agcatggtct gggcagcgga atcattatct cgccagacgg
     5641 ttatatcgtg accaacaatc acgtggttga aggtgcggtg gacctgcgcg tgaccctgaa
     5701 tgatcgccgg gtgctgccgg caaagctgat cggcgccgat ccgcttaccg atctggcggt
     5761 gatcaaagtg aacgcaaaca atctgcagag cgtaccgtgg ggcgaatcga gcgcactgaa
     5821 gccgggacag agcgtactgg ctttcggcaa tccgtttgga ttccgcttta cggtgacgcg
     5881 cgggattgtg agcgcactga atcgtaccaa cccgtacact gacgatccgc ggaagcccgg
     5941 ccagttcatc cagaccgatg ccgccatcaa cccaggtaac tccggtggcc cgctggtgaa
     6001 cgcacacggc gaagtggtgg gcatcaacac gttcctgatt tcgccttcag gatctttcag
     6061 cggaatggga ttcgcgattc ctgcgcagct cgcacggccg attgtgaaca cccttatcaa
     6121 agacggcaag gttgagcacg cgcgcatcgg tgtcagcatt aatgacgtga cgccggagaa
     6181 cgcgaccttc ttccatctca atgaagctac cggcgcgctg gtgagccagg ttgaacctga
     6241 ttctcccggt gcgaaggcag gactcaaggt tggggacgta attacggaac tgaacggcaa
     6301 gaaagttgac gacgccggcc aattgcaggc gctcatcagc caggaaaaac cgggtgacaa
     6361 ggtgaacctg gctgtgttcc gtgatggcaa aaaccagacg atgccggtca cgctggaagc
     6421 aatgaatccg aagaacacga tggcatcgaa ctccggcaat tcgcagggca agccgcgctg
     6481 gggcgttggc ctgagcgacc tcacgccgga tgtccgcgat gaactgcagc tcccaactaa
     6541 cgtcaaggga gcagtggtga ccaacgtgca gcccggcagc cccgccgaca acgccggaat
     6601 cagccgcggt gacgtcatcg tggaagtgga ccggcaccag gtgcagagct cgcaggacgt
     6661 gaagcgcgag ctcggcagcg ttcccacagg aaaagacgcg ttgttgctcg tatggtcaaa
     6721 tggcggcagc agcttccgcg tgatgcatgc ggcagaggcc gcccagcctg cgggagagta
     6781 agacaagcaa gcagcagtga cacgctgaac ggcgcactct tgattcattg agggtgcgcc
     6841 gttttctttt gtgcgcaaca ctcgtcacgc cgagcacgtg acattccaac ttggcggctg
     6901 ttctgtgact ctcgtcacgg tactgcaccg cgattgctgc taaattcgcc gccagccaac
     6961 acgcgaatcc aacgtcttca ttttttggtg gcggtgcaat ttcgtgtctc aagaatcagc
     7021 gccgccgggg caaaacgttc aacactctcg gaggctttca attatgagtc gaatcgcatc
     7081 gcgcgtctgc gcaggagtac ttggcttgct gctcgtgcct gggctcctat tttcagcgga
     7141 caataattca gccaacaata acagcgctgc aaacggcgct accaacgcag ctcctggtgc
     7201 gcctgccgcg ccggcggcgg ttccgcttga tccgctgctg cggctcatgc tggcgcaggg
     7261 cctggtctca caggaagaag tcgcaaagct cgccggggtg ccatcttcag agttgcgcga
     7321 ccggctgctg ctgctcttgc tggcgaaaaa caagtctgcg ctgagcgcag ccgacctgaa
     7381 tgctctgaac gcgccagcca attcagccgt ggcggcgact gatccggcag cgtccgcgga
     7441 tgcggtcatc gacttcggcc aggccagcgg gcctccgcag cctccgaaga cacttccgcc
     7501 atccggtccg attcccgctg tcgcaccgat ccgcgtgatg caggtgactc ctgccaagcg
     7561 tgaaggtgtg attccggtcc tcgccattgg gaagaatgtg cacattcaac cctatggctt
     7621 tatcaaggcc agcgctgtgt atgacacgtc atctccgtac ggcaatgatt tcccattgcc
     7681 cggttttatc ggcgacatca acggccctga cgcattcccg gaattccata tcaaggcgcg
     7741 tttcatccga atcggttcga actttgaatg gatggacaca cctaaagtgg tggtgaccgg
     7801 aaaaatcgaa ggcgattttg aaggcaactt cagccgcgcc aacaaccgga acatcagctc
     7861 cgtgcgttcg aatatgttct cattccgcgt cggctacgga cggatcgact ggcacacaac
     7921 ggacaccacc agcctgttct tcctggccgg ccaggactgg acaccgtttg catcctcgac
     7981 cctgccgaac ctgttcgaga caaccgggct gggcgtgggc ttcgggacaa cctatgagcg
     8041 cgatccgcag ttcagggtcg ggttaaacca caaattctcc agcagcgtct cgctgtcacc
     8101 tgaatttgcc attgtgctgc cggcgttcgg caatttgcct tcgaacgtgg ctgaccagct
     8161 tggcttcggc gagcgccaag gtgcggattc aggcaaaccg gagatccagg cgcgcctggt
     8221 aacgcagttc cagctcgatc acgcggcagg tgttgcgccg gcgcagatca tcgtgagcgg
     8281 cgtgcacgga cagcgtacgg ttacggtatt agcgtcagca gttccggcgg cgttcaaggc
     8341 ggcgttccca tccggagcgc aggtttcctc tgaccgcaat gcctggacgg gagaaatcca
     8401 gttgccaacg cggtttgcga cgatcattgc caagtactac aacggcagcg atctgcgcta
     8461 ctacttcgcc aaccaactgc tctcgaattt cccgaacaca accggcctta ccggcaccgc
     8521 aactgcgcct tcggtggatg gttcttccac ggtggtattc ggaaaccttg ccggcgtgcc
     8581 aacgattgcg ccgcagatcc cgattcgcgg tcagggcggt tttgtgaaca tcggcctgcc
     8641 gttctcacgc tgggccaatg ccgaccccac cggacgcaac gctggatggg taggctacct
     8701 gcactatggc tttgacgaag cactcgcgcg cgacgcccgt cgcgcaggcg gcggccggca
     8761 gaagtcagac gtggccgcgg gtaccctgca gtacaagatg aacagcttcg tgacgttcgt
     8821 gctggaagag tcttactacc gcacgcgcgc cattccgctc acctccaccg gactgttccc
     8881 actgttccag ggacggccaa t
//
LOCUS       DASQYP010000378         2607 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_314943, whole genome shotgun sequence.
ACCESSION   DASQYP010000378 DASQYP010000000
VERSION     DASQYP010000378.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 2607)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2607)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2607
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_314943"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            49..>2607
                     /locus_tag="VE783_12410"
     CDS             49..>2607
                     /locus_tag="VE783_12410"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain S-box protein"
                     /protein_id="HYX54249.1"
                     /translation="MNASSPLPSSAQQPDFKALFESAPGPCLVLAPDQTVIAASDAYL
                     RAAGLERHQIAGRSLLDVFSHDSGSPIAAVVRNLGPSLRRVVQTGAEDTMPVQRIAGR
                     YWRPVNSPVKARDGSVSYIIHQLEDVTELVQLKEKHALGEKSRLELRAEPAATEGTVL
                     VRARELEEINDKLRSANEELAHMYQKAEEIYRLKTDLFASVSHELRTPLTLLLGPLDD
                     LLQSPGASIAASRTDLELMRRNSLRLLKLVNTLLDLSRIEAGRLRGDYVPTDLTALTT
                     DLASLFRPLVQKAGMAFDLALEQLGEPVYVDRTMWEKIILNLLSNAFKFTSQGSISVS
                     LQKTGNRAQLIVADTGIGIPEPDLPHIFERFFRGDTAGARSFEGSGIGLALVHELVRL
                     HGGNIEVQTSVAQGTAFTVSIPFGTAHLPNPPVRTGQTGITPTSRTAYEVEAEVWGAA
                     LGKTAAALPDGASVVELPAAEPKPRIVFADDDRDMRDYVTKVLTPYYEVEVCANGQQA
                     FAAALKQPPDLVLSDFMMPVMDGTHLLRALKGNPSTAAIPVILLSVRTEEDSQIKGLE
                     AGADDYISKPFTTRELLARIKSRIALAQFREYAQQQEVRNEQRFRQLLDTASEAILVS
                     DAQGRILVFNQTAEKMFGYGPRELLHLNIEQFVPEASRAIHARHRADYLRAPKMRPMG
                     VGLSLQAQRKDGSLFPAEVGLSPNWSDGELKIIMLVHDVSERVRFEESLRRSQEALRQ
                     AEKLEAIGRLAGGTAHEFNNLLTRVMGYSALMLSALDSKEQIIDYVEKISEATRRAGS
                     LTHQLLAFSRRQVLQPQVVDLNVMLAESREVLPALVGTDIRTSLVPADEPVFVRV"
BASE COUNT          522 a          806 c          729 g          550 t
ORIGIN      
        1 gcgacacaag cgttcgtctg ctcgtgaatt tatgtctgga gcgcccccat gaacgccagc
       61 tcgcctctcc cgtcttccgc tcagcaacca gacttcaaag cgctgttcga atcggcgccc
      121 gggccttgtc tggtactggc gcctgaccag accgttatcg cggcaagtga cgcatatctt
      181 cgcgctgccg gccttgagcg ccaccagatc gccgggcgca gcctgctcga tgtgttttcc
      241 cacgactcag gcagccctat cgccgcggtg gtccggaacc ttggcccatc tcttcggcga
      301 gtcgtacaga ccggggctga ggacaccatg ccagtccagc gcattgctgg aaggtattgg
      361 cgcccggtca actctccggt caaggcgcgc gacggctcgg tttcttacat catccaccag
      421 ctggaagatg ttacggagtt ggtccagctg aaggagaagc acgcactcgg ggaaaaaagc
      481 cggctcgagc tgcgcgccga gcctgccgca acggaaggca cggttcttgt gcgagctcgc
      541 gaacttgagg aaatcaacga taagcttcgt tctgccaatg aagaactggc gcatatgtac
      601 cagaaagctg aggagattta tcgcctcaaa accgatctat tcgccagcgt cagccatgag
      661 ttgcgcacgc cacttactct gcttctgggc ccgctcgacg acttgctgca gtcccccgga
      721 gcctccatcg ccgccagccg gactgatctt gagctgatgc gccgcaacag cctgcgtctg
      781 ctcaagctgg tgaacacact gcttgacctc tcgcgcattg aagcaggccg gctccgcggc
      841 gactacgtgc ccactgacct gaccgcactc accactgact tggccagtct atttcgccct
      901 ctggtgcaga aagccggcat ggcctttgac ttggcactgg agcaacttgg agagcccgtt
      961 tacgttgacc ggacgatgtg ggaaaagatc attctcaacc tgctctccaa cgccttcaag
     1021 ttcacctctc agggcagcat tagcgtttct ctccaaaaaa ccggcaaccg cgcacagctc
     1081 atcgttgctg ataccggcat cggcatccct gagccggatt taccccacat tttcgagcgc
     1141 ttttttcgcg gcgacacggc gggcgctcgc tcctttgaag gttctggaat tggcctggct
     1201 ctcgttcatg aactcgtcag gctgcatggc gggaatattg aggttcaaac ctctgtggcg
     1261 cagggaactg cgtttacggt ttccatccct ttcggaaccg cccatttgcc caatcctcct
     1321 gtccgaacgg ggcagaccgg aatcacacca acatcccgca cagcctatga ggtggaagcc
     1381 gaggtttggg gcgccgctct cggcaaaact gcggccgctc tcccggatgg cgcaagcgtc
     1441 gtagagttgc ctgccgctga acccaagcct cgcattgtgt ttgccgacga tgaccgcgac
     1501 atgcgcgatt acgtcaccaa ggtgctcacc ccttactatg aagtggaagt gtgcgccaac
     1561 ggccagcagg cgttcgctgc tgcactcaaa caacctcctg atctggtgct gagcgatttc
     1621 atgatgcccg tcatggacgg aacccacctg ttgcgggccc tcaaaggcaa tccttccacc
     1681 gctgccatcc cggtcattct gctttccgtg cgcacggaag aagactccca gatcaagggc
     1741 ctggaagctg gagcagacga ttacatcagc aagcccttta ccacgcgcga gctgctggcg
     1801 cgtatcaaat cccgtattgc gttggcccaa ttccgtgaat atgcgcaaca gcaagaggtg
     1861 cgcaacgagc agcgattccg ccagcttctg gataccgcgt cagaggcgat tctggtctcg
     1921 gatgcccagg gacgcatact cgtgttcaat cagaccgcgg agaagatgtt cggttatggg
     1981 cccagggaac tgctgcacct gaacattgag cagttcgtgc ctgaagcctc tcgggccatc
     2041 catgcccgcc accgggctga ttatctgcgc gccccgaaaa tgcgccccat gggagtaggc
     2101 ctttcccttc aggcgcaaag gaaggatgga tcgctttttc ccgccgaggt gggtctgagc
     2161 ccgaattggt ctgatggtga attgaagatc atcatgctgg ttcatgatgt gagcgaacgc
     2221 gtcaggtttg aagagagcct tcgcagatca caggaagccc tgcgccaggc agagaagctc
     2281 gaggctatcg gtcgcctggc cggcggtacc gcccatgaat tcaacaacct gctgaccagg
     2341 gttatgggat attccgcctt gatgctctcc gcgctcgact ccaaagaaca gatcattgac
     2401 tatgtggaga agatcagcga ggcgaccagg cgtgcgggga gccttaccca tcagcttctt
     2461 gccttcagcc gccggcaggt gcttcagccg caagttgttg accttaatgt catgctcgcc
     2521 gagagccggg aagttcttcc cgcgctcgtc ggcacagaca tacggactag tctggttcct
     2581 gccgatgagc cggtctttgt gcgcgtt
//
LOCUS       DASQYP010000379        10624 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_164929, whole genome shotgun sequence.
ACCESSION   DASQYP010000379 DASQYP010000000
VERSION     DASQYP010000379.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 10624)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10624)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10624
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_164929"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(16..1620)
                     /locus_tag="VE783_12415"
     CDS             complement(16..1620)
                     /locus_tag="VE783_12415"
                     /inference="COORDINATES: protein motif:HMM:NF024598.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative glycoside hydrolase"
                     /protein_id="HYX54250.1"
                     /translation="MESRKLKFVPTAAIIVAIFGIAILAFARHSLINPAHVAAAQSTI
                     AAQAPVQTQPVAATAQPTAEQLPPGTIKYEAKAVTTAQFLARQHLTESKYMTVAEYVA
                     AIGQANSGKTSFKRGDTVLIPGIESQPVVEKSRPYPKEEEIRAVYMTGTTAGSVKGLE
                     LAKRWKEAGGNAVVFDIKDSDGSISIPFDHPLAKKTVHHSISNLPKYVRYLHSLDLHV
                     IARQALFRDDNIAQNHSTLAVQSRSMHQPWRENGKLVWTDSSNKEVQDYNIALAKYVA
                     SCGVDEIQFDYVRFPAEGNQADAEFAFQKDPNVHRDDVIASFLERAYAQLHPTGVLMS
                     LDVFGVMAWQRQVDLSHTGQDIVKMAKHADVISPMIYPSHFFGMDGYANPGDAPEHFI
                     GTSMDRFVKVTAGSGVVLRPWLQAFHWRTKTYSPEYILTQVSTSKKHGGDGFLFWNAA
                     NDYSKPFTAMPVMMGNPKTYLKTPDDVPVTQTASATMPNGMQSAAAQGHAAHAAKVGK
                     AAQSGVASHASENGGAASSAAAAKHQ"
     gene            1848..3026
                     /locus_tag="VE783_12420"
     CDS             1848..3026
                     /locus_tag="VE783_12420"
                     /inference="COORDINATES: protein motif:HMM:NF019344.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HYX54251.1"
                     /translation="MRTGLNTALDPTLRSSDARDFEAGLRRKIVGQDPAVEKVVEIYQ
                     MYLAGLNAPGRPVGNLLFLGPTGSGKTRVVEAMAEALFGDPRAVIKIDCAEFQHSHEI
                     AKLIGSPPGYLGHRETHPLLTQEALNQWHTDKLKLTLLLFDEIEKASDALWQLLLGIL
                     DKATLTLGDNRRVDLSQCLIVMTSNLGAGEMNDILSGGLGFAKPKKMEQIIDARVDEK
                     ITRSAQEAARRKFSPEFMNRIDKIVVFKTLKPEHLEHILEIELGMVQQRILQATGNHQ
                     FVFSCTGPVKGFLLREGTDPKYGARHLKRAIEKNIVFPLANLVATGQIKLGDFIRIDM
                     KNETLTFTKEAEGALVPVLLEKYGDTNPTGAVAARASRGNSKSRATEFGGSGSLLDHK
                     "
     gene            3328..5367
                     /locus_tag="VE783_12425"
     CDS             3328..5367
                     /locus_tag="VE783_12425"
                     /inference="COORDINATES: protein motif:HMM:NF014071.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydantoinase/oxoprolinase family protein"
                     /protein_id="HYX54252.1"
                     /translation="MPPQPPSSLRIAIDSGGTFTDCVWLESAAGRLHLRVLKLFSTPS
                     DPSQAIAEAVSRIAGSAPAVTVLHGTTVGTNTLLQRKGARVAFVSTAGFEDSIEIGRQ
                     NRPRLYDFFFQKEPALAPPELRFGVAERLAADGSVLQAPDAASLRTLTEKLRAQSPQA
                     IAISLLFSFANPEHEQIVAKALDDLNVPLSLSHQILPEFREYERASTVLVNAYLQPVM
                     EKYLLGLQQRLNSHHSGRKPARIFVMQSSGGITALKTAAEQPVRTVLSGPAGGVVGAA
                     AVAARSGFTRLITFDMGGTSSDVALVDGQASTTNEGEVAGLPVRVPVLDIHTVGAGGG
                     SLARFDAGGALRVGPESAGADPGPICYGKGEQPTVTDANLLLGRLPAKQFLGGDFILD
                     LPRTQQVVQRWLKDRGSKLSLQDFAAGVVRVVNANMEKAIRVVSIERGHDPRDFTLVA
                     FGGAGAMHACELARSLRIPRVLVPAHPGALSALGILISDVVKDHSRTVLLRVAAGKFS
                     SQLKSRMASIYAELQQRVVSELTAEDWKGRAVYERSADLRYRGQGFELSLPFGPDILS
                     RFAAEHKRRYGYSDPERDIEIVTVRVRGRVASPEKLEKMRVEEESTRRLQATMAEVFF
                     EGKKWMPQVIPRSLLRSGKRLRGPAIITEYSATTVVPPGVTFQADRVGNLLVEVA"
     gene            complement(5463..5690)
                     /locus_tag="VE783_12430"
     CDS             complement(5463..5690)
                     /locus_tag="VE783_12430"
                     /inference="COORDINATES: protein motif:HMM:NF017353.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CsbD family protein"
                     /protein_id="HYX54253.1"
                     /translation="MDKDRIKGAAEDMKGRVKRQVGEWTGDDKAQAEGTADQIKGKAQ
                     NAMGKLKDAVRDATDDTKRNDRDIERKDDAA"
     gene            complement(5738..5890)
                     /locus_tag="VE783_12435"
     CDS             complement(5738..5890)
                     /locus_tag="VE783_12435"
                     /inference="COORDINATES: protein motif:HMM:NF033488.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lmo0937 family membrane protein"
                     /protein_id="HYX54254.1"
                     /translation="MLWTIFVILLVLWLLGVVSSYTMGGFIHILLVLALVALVFQLIT
                     GRRTAV"
     gene            complement(6232..7533)
                     /locus_tag="VE783_12440"
     CDS             complement(6232..7533)
                     /locus_tag="VE783_12440"
                     /inference="COORDINATES: protein motif:HMM:NF017044.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pitrilysin family protein"
                     /protein_id="HYX54255.1"
                     /translation="MNSAVQISTHTEARDIHREVLPNGLIVVSEEMTNIRSIAIGIWL
                     RTGSRDEAPEVNGISHFTEHMVFKGTKSRSARDIAREVDSIGGNMDAFTGKETICFNI
                     KVLDEHLPLAIDILSDLVLNPVFEPKDITREKGVILEEIKMDEDNPDYLVHELFTQNF
                     WQDDPLGKPILGTKETVRSFEQEKLFNFYNRCFVPNNMIISAAGHLKHGNFSDLIKQR
                     FAPLNMATNGFHHPAPAVTPRIITRNKKALEQVQLCLGVPSHPISHEKRYVSYVLNTI
                     LGGGMSSRLFQKIREEQGLVYSIYSDLNPYRDTGCMAVYAGTSLESTPKVVDSILAEF
                     RELKGGRVPADELRRAKDQLKGSLMLSLESSTSRMSNLARQEMYFEHFFTLDETIHQI
                     ESVQADEIVELAEHLFQPDKIAITVLGNLDGLKLSREQLIC"
     gene            7726..8853
                     /gene="rlmN"
                     /locus_tag="VE783_12445"
     CDS             7726..8853
                     /gene="rlmN"
                     /locus_tag="VE783_12445"
                     /EC_number="2.1.1.192"
                     /inference="COORDINATES: protein motif:HMM:TIGR00048.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_function: GO:0016433 - rRNA (adenine) methyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0031167 - rRNA methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (adenine(2503)-C(2))-methyltransferase
                     RlmN"
                     /protein_id="HYX54256.1"
                     /translation="MAEFPSSGLFGLDFQELSRIVQEHGQPEYRARQLFTAIYPQRLP
                     ALEQISTLPQQFRVTLQAAGLDIVHPLIEKSFHSTDGTIRYLMAMADGETVETVWMPE
                     GDEGESGDGSEAGDPISAREQIGQHAPNWERATICVSSQVGCAVNCQFCLTALLGVKR
                     NLTVGEIVGQIVAVLNDRGVDLERQRVNLVFMGMGEPFLNYPNFMKAAQLLVEGVGIP
                     ESRMTVSTSGIIPRIYDFGAEPVRPKLAISLNAPNDELRNRVMPLNRKWDLTQLMQAA
                     RDFPLRNRERITFEYVLLANVNDAPEHARQVVELVRGIRCKVNLIALNPGPGIHFGTP
                     EEQRVHAFQQILIKAGIPAFVRRPRGRDIYAACGQLKRTVA"
     gene            complement(8985..9740)
                     /locus_tag="VE783_12450"
     CDS             complement(8985..9740)
                     /locus_tag="VE783_12450"
                     /inference="COORDINATES: protein motif:HMM:NF020123.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TlpA disulfide reductase family protein"
                     /protein_id="HYX54257.1"
                     /translation="MLVQEVAAKYPGQVNFVSENFGASKLADRFGVKGYPAVFVDDVL
                     VAAPRDFGYFGEKDGTGRYAPWRNAQSQEKFKSDLTRMIDLILSGRKDVVSREHANVS
                     ASAMQLSSLPKFTVTDMNGQPLSADQLAGRVVLVEFWATWCPPCRSTLQWLGALKQKY
                     GDNVAIVALAVESPEEKIKETVAALSPDLHWAITDSQTAQAFGDITSVPTMFLFDRSG
                     KTARVLYGAPPDLHEQAEKTLESLMAGSTSGSL"
     gene            complement(9762..>10624)
                     /locus_tag="VE783_12455"
     CDS             complement(9762..>10624)
                     /locus_tag="VE783_12455"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX54258.1"
                     /translation="NVGRATDLINGVRAIQKKTAAVGSGLPAFETEWNKASLELTSLD
                     EKARQRNWSGAPVAMRALAEVAQGRVTPLLEGSRGFATSTKPADGLLYMGEATGQAEF
                     SSFLYGLNVPCKGEALALRSYLPELQRLQQKVNAAFVPPKSIEMHPRFIALNSTLKLG
                     QELDSSRSYAGALYAYLEATRHFGMLDTPVPDADKLKKLRAAVAEKLKALASSQQDES
                     MQQLFLQRAQNYLAHDDASKSQDDELKAAAVIVEQVLPAYAAALKPAAPVMRAPAKTV
                     DITLVRWPYT"
BASE COUNT         2122 a         3245 c         2948 g         2309 t
ORIGIN      
        1 tcgccgcgcg atcggttact gatgttttgc cgctgccgcg ctgcttgccg cgccgccgtt
       61 ttcactcgcg tgcgaagcca cgcccgattg cgccgcctta cccactttcg ccgcatgcgc
      121 cgcatgcccc tgagccgccg ccgattgcat tccgttcggc attgttgccg acgcggtctg
      181 cgtcaccggc acatcatcag gcgtcttcag ataagttttc ggattgccca tcatcaccgg
      241 catcgcggta aacggcttcg agtagtcgtt ggccgcgttc cagaagagga agccatcgcc
      301 gccgtgcttc tttgaagtgc tcacctgcgt caggatgtac tccggcgaat acgtcttcgt
      361 tctccagtgg aaggcctgca gccacggccg cagtaccacg cccgaaccgg cagtgacctt
      421 cacaaatcgg tccattgagg tgccgatgaa gtgctccggc gcgtcgcccg ggttcgcata
      481 cccgtccatg ccaaagaagt gcgaaggata gatcatgggc gagatcacgt ccgcatgctt
      541 cgccatcttc acaatgtcct ggccggtgtg gctcaggtcc acctggcgtt gccatgccat
      601 cacgccaaag acgtcgagtg acatcagcac gcccgtggga tgcaactgcg cgtaagctcg
      661 ctccaggaag ctggcaatca cgtcatcgcg atgcacgttc ggatctttct ggaaggcaaa
      721 ctccgcgtca gcctgattgc cctcggcagg gaagcggacg taatcaaact ggatctcatc
      781 cacgccgcag ctcgccacat acttcgccag cgcaatgttg taatcctgga cctccttatt
      841 agaggagtcc gtccacacca gcttgccgtt ctcgcgccat ggctggtgca tgctgcgcga
      901 ctgcaccgcc agcgtgctgt ggttctgggc aatgttgtcg tccctgaaca gcgcctgccg
      961 tgcgatcacg tgcaggtcca gcgaatgcag gtagcgcacg tacttgggca ggttgctgat
     1021 ggagtgatgc acagtctttt tggcgagcgg atggtcaaac ggaatgctga ttgacccgtc
     1081 gctgtcctta atatcaaaga ccacggcgtt accgccggct tctttccagc gcttggccag
     1141 ctcaaggccc ttcacgctgc cggcggtagt gcccgtcatg tagacggccc ggatctcctc
     1201 ttccttggga tacgggcggc tcttttcgac gaccggctgc gactcaatgc cggggatcag
     1261 cacggtgtcg ccgcgtttga agctggtctt gccactgttc gcctgcccga tcgccgccac
     1321 gtattcggcc accgtcatat atttcgattc ggtcaggtgc tggcgggcaa gaaactgcgc
     1381 cgttgtcacc gccttggctt catatttgat ggttcccggc ggcagttgct cagccgtcgg
     1441 ctgtgcggtg gcggcaacag gctgcgtctg cacgggtgcc tgggcggcga ttgtgctctg
     1501 tgcggccgcg acgtgcgcgg ggttaatcaa tgagtgacgg gcaaaagcga ggatcgcaat
     1561 gccgaaaatc gctacgatga tggctgctgt gggtacaaac ttcaacttcc gtgattccat
     1621 gcgtgctctt ttccggggtc tgaacgcatc ttagcacgat ctgcatctct gaaatcaaaa
     1681 tggcttctgg tgctagacct tcagtgcaca acctgcatct tacgtagatg cacgggcggc
     1741 agatgttggc gagtcagtta ttacaactct cacgtaagcc actccatctc agcctgtatg
     1801 ccttctgatc gaaggagtcc tcggcggaag ctttcgaggg agtaataatg aggaccggtc
     1861 ttaataccgc acttgatcca accctgcgca gctctgatgc gcgagatttc gaagccggac
     1921 tacgccgcaa gatcgttggc caggacccgg cagtcgaaaa agttgtcgaa atctaccaga
     1981 tgtacctggc cggcctgaac gctccgggcc gtcccgtggg caatctcctt ttcctggggc
     2041 ccaccggctc cggcaaaacc cgcgtggtgg aagccatggc ggaagccctc ttcggcgatc
     2101 cgcgcgccgt catcaaaatc gactgcgccg agttccagca cagccatgaa atcgccaagc
     2161 tcatcggctc gcctccgggt taccttggcc accgggaaac gcaccccttg cttacgcagg
     2221 aagcgcttaa ccagtggcac actgacaaac tcaagctcac gctcctgctt ttcgacgaaa
     2281 tcgaaaaagc cagtgacgcg ctctggcagc tcctgctcgg catccttgac aaggccacgc
     2341 ttacgctggg cgacaaccgc cgcgtcgacc tatcacagtg cctcatcgtc atgacctcca
     2401 acctcggcgc cggcgaaatg aacgacattc tttccggcgg cctcggcttc gccaagccca
     2461 agaagatgga gcagatcatt gacgcccggg tcgacgagaa aatcacccgc agcgcccagg
     2521 aagccgcgcg gcgcaagttc tcgccggagt tcatgaaccg cattgacaag atcgtcgtct
     2581 tcaagaccct caagccggaa caccttgagc acatcctgga gatcgagctt ggcatggtcc
     2641 agcagcgcat cctgcaggcg accgggaacc accagttcgt cttcagctgc accggcccgg
     2701 tcaaggggtt cctgctccgc gaaggcacag atcccaagta cggcgcccgc cacctgaaac
     2761 gggccattga aaagaacatc gtcttcccgc tggccaacct ggtggccacc ggacagatca
     2821 agctcggcga cttcatccgc attgacatga agaacgagac cctgaccttt actaaagaag
     2881 ctgaaggcgc tctcgtcccg gtcctgctgg agaagtacgg agacaccaac ccgaccggcg
     2941 ccgtcgccgc ccgtgccagc cgaggcaata gcaaatcccg cgccaccgag ttcggcggca
     3001 gcggctcgct gctcgaccat aaatagaaga tcaacttcag ccagagccaa agcccggccg
     3061 cacgtgagcc gggctttttt cgtcggccaa gtcgcggcac ggaagatatc ccggcgcaca
     3121 ggtaccctcc gctgcaccga gcatgagcca ccaagcagct acttttcccg ttcgcgttga
     3181 atgcggaacc ccttggacga cggcgggaag tgcaatgcaa agctctaacc tcgtgcattc
     3241 gtcattgagg gattttgact tctctcagat ttcctttgcg ttctgtgcga cctttaaagt
     3301 gaaaacttgt tagaatcgcc agttcgcatg ccgccccaac ccccttcatc tctacgaatc
     3361 gcgatcgata gcggcggcac gttcactgac tgcgtgtggc ttgaatctgc agccgggcgt
     3421 ctgcatcttc gcgtgctcaa acttttctcc acgccttcag atccctcgca ggccatcgcc
     3481 gaagctgttt cgcgaattgc aggttctgcg ccggcggtca ctgtccttca cggcaccact
     3541 gttggcacca acactctcct gcagcgcaaa ggtgcgcgcg tggcttttgt cagcaccgcc
     3601 ggttttgagg actccattga gattggccgc cagaaccgac cccggcttta tgacttcttc
     3661 tttcagaagg aacccgcact cgcgccaccc gagctgcgct tcggagtcgc cgagcgcctt
     3721 gccgccgacg gatctgtttt gcaggctccc gacgcggcga gcctccgcac cctaacggaa
     3781 aagctccgcg ctcaatcacc tcaggcaatt gccatatccc tgctgttctc atttgccaat
     3841 cctgaacacg agcagattgt cgccaaagcg cttgatgatc tgaacgttcc gctctcgctt
     3901 tcccaccaga tcctgcctga gttccgtgaa tacgagcgcg ccagcacggt cctggtgaat
     3961 gcataccttc agccggtcat ggagaaatat cttctcggcc ttcagcagcg cctcaactcg
     4021 catcactccg gccgcaagcc ggcgcgcatc ttcgtcatgc aatccagcgg cggcatcact
     4081 gcgctgaaaa cggcggcgga gcagccggtg cgcacggtac tctccggtcc cgccggcgga
     4141 gttgtgggcg ccgctgcggt ggcagcgcgc agcggattca ccaggctgat cacctttgat
     4201 atgggcggca catccagtga cgttgccctg gttgacggcc aggcttcaac taccaatgaa
     4261 ggcgaagtag ccggtctgcc agtacgtgtt ccggtgctcg acattcatac cgtcggcgca
     4321 ggtggcggct cgctggcccg cttcgatgcc ggtggtgccc tgcgtgtcgg tcccgaatct
     4381 gccggcgctg accccgggcc aatctgttac ggaaagggtg aacagcccac cgtcaccgat
     4441 gccaacctgt tgctcggccg gctgcccgca aagcaatttc tcggcggaga cttcatcctc
     4501 gacctcccgc ggacacagca agtcgtgcag cgctggctca aggatcgtgg cagcaaactg
     4561 agcttacagg atttcgctgc cggcgtagtc cgtgtggtga acgccaacat ggaaaaagca
     4621 atccgcgtcg tctctatcga acgcggtcac gatccccggg attttaccct cgtcgcattt
     4681 ggcggcgctg gcgccatgca cgcctgtgaa cttgcgcgtt cgctgcgaat accgcgcgtg
     4741 cttgtgccag ctcacccggg tgcgctctct gcactcggca tcctgatcag cgatgtggtg
     4801 aaagatcact cgcgcacggt gttgctaaga gttgcggccg gaaaattctc aagccagctg
     4861 aaatcccgga tggcttcaat ctatgctgaa ctccagcagc gtgtcgtttc cgaactcacg
     4921 gcggaagact ggaagggaag agccgtctac gaacgcagcg ctgacctgcg ctatcgcggc
     4981 cagggcttcg aactgagcct gccgttcggt ccggacatcc tcagccgctt cgccgccgaa
     5041 cacaagcgcc gctacggcta cagcgatcct gaacgcgata tcgagatcgt caccgttcgc
     5101 gtacgcggcc gcgtcgcctc cccggagaag cttgaaaaaa tgcgagtaga agaggagagt
     5161 acaaggcggc tgcaggccac catggcagag gtgttctttg aaggaaagaa atggatgccc
     5221 caggtcattc ctcgctctct tctgcgctct ggcaagcgac tccgtggccc tgcaattatc
     5281 accgaataca gcgcaactac tgtagtgccg ccgggtgtca ctttccaggc cgacagagtc
     5341 ggcaatctcc tggttgaagt tgcgtgacaa gcggcatgga gtaatgctgc gggtggaaac
     5401 gaaaagggac ggaaagaaca cccgtccctt ttggcttttt caaggagcga agacaatatc
     5461 ttttacgctg cgtcgtcttt gcgttcaatg tcgcgatcgt tgcgcttggt atcgtccgtt
     5521 gcatcacgaa ccgcgtcctt aagcttgccc attgcgtttt gggccttgcc cttgatctgg
     5581 tcggcagtgc cttccgcctg tgccttgtcg tcgcctgtcc attctccgac ttggcgcttc
     5641 acgcgacctt tcatgtcttc cgccgcgcct ttaatacggt ccttatccat aacacctcca
     5701 ctgggattct gagtttacgt ttgggttgcg gcgactgcta gacagccgtt cgtcttcccg
     5761 tgatgagctg gaatacgagc gccaccagcg ccagtacgag caggatgtga atgaatccgc
     5821 ccatggtata actgctcaca actccaagca gccacagaac aagcaggatc acaaaaattg
     5881 tccaaagcat atcgtcacct ttactgagtg tttcagaccc ttggttggaa ggttaagggg
     5941 gaagtcaggt tgtaaaaaat cgagagctgc accgggccag cactgcattt aggctcagca
     6001 aaaatgcctt atcggtgcaa cccaagctcc ctcccgcccg cagggcggga gagtgcaagc
     6061 cggggtccgc atcgaacgcg attttcgccc gttggggtga agcccggggc cttagccccg
     6121 ggtaggttgg aggagttcga cgtgagcccc gggatgggcg acacagttca acgatgcaaa
     6181 acaaaaaagg cacagcctct cgactgtgcc tttcctaaaa cttcgatctg gctagcagat
     6241 cagctgctca cgcgataact taaggccatc cagatttccc agcacagtaa tcgcaatctt
     6301 atcgggctgg aacagatgct cagccagttc cacaatttca tctgcttgta ctgactcgat
     6361 ctggtgaatc gtctcatcca gggtaaagaa gtgctcgaag tacatctctt gccgcgccag
     6421 atttgacatc cgcgaggtgc tcgactccag gctcagcatc aggcttccct tcagctggtc
     6481 cttggcgcgt cgcagctcat ctgccggcac gcgaccccct ttgagctcac ggaattccgc
     6541 cagaattgaa tccactactt taggtgtgga ttccagcgaa gtgccggcat aaaccgccat
     6601 gcagccggtg tcgcggtagg gattcaggtc actgtaaatg gaatacacca gcccttgctc
     6661 ttcacgtatt ttctggaaga gccgcgaact cattccgcca cccaggatcg tattcaacac
     6721 gtaagagacg taccgcttct cgtgggagat gggatgggaa ggcactccca ggcagagctg
     6781 cacctgctcc agcgcctttt tgttgcgcgt gatgatgcgc ggcgtcacgg ccggcgcagg
     6841 gtggtggaaa ccgtttgtcg ccatgttcag cggcgcgaag cgctgcttga tcagatcgga
     6901 aaaattccca tgtttcaggt gccccgctgc cgaaatgatc atgttgttcg gaacaaagca
     6961 ccggttatag aagttgaaca gcttctcctg ctcgaacgag cgcaccgttt ccttggtgcc
     7021 cagaatcggc tttcccagcg gatcgtcttg ccagaagttt tgcgtgaaca actcatggac
     7081 aaggtaatca ggattgtcct cgtccatctt gatctcttcc aggatcacgc ctttttcgcg
     7141 cgtaatatct tttggttcga ataccgggtt cagcaccaag tcgctgagaa tgtcgatcgc
     7201 cagcggcaaa tgctcatcga gcaccttgat gttgaagcag atggtctctt tcccggtgaa
     7261 ggcgtccatg ttgccgccaa tggaatccac ctcgcgggct atgtcacgcg ccgagcgtga
     7321 tttcgttccc ttgaagacca tgtgttcggt gaagtgagag atcccgttta cttccggggc
     7381 ctcgtctctt gagccggttc tgagccaaat gccgatcgca atcgaccgga tgttggtcat
     7441 ctcctcgctt acgacaatca gtccgttggg caggacttca cggtgaatgt cccgggcttc
     7501 tgtatgagtg ctgatttgga ctgctgagtt catgattatg ccgttactat gattctcaca
     7561 caccgtaaag ggtcgctcat gttttatatg ttattttgct gcaataactt acaggtaagg
     7621 tcacagaagg cctgtccact tccccgtcgc gtgtagaatt aagggtaaag ccgggcatgt
     7681 gccgctcata ggcggctcat tccgcggcag caggaaccat ttgcgatggc ggaattcccc
     7741 tccagcggcc tttttggcct tgattttcaa gagcttagcc ggattgtcca ggaacacggc
     7801 cagcccgagt accgcgcccg ccagctcttt accgccattt atccgcagcg ccttcccgcg
     7861 ctcgagcaga tttccacgct gccccaacag tttcgagtca ctcttcaggc agccgggctc
     7921 gatatcgtcc acccgctaat cgaaaagagc ttccactcta ccgatggcac cattcgttat
     7981 ctcatggcga tggccgacgg cgaaaccgtt gagaccgtct ggatgcccga gggcgacgaa
     8041 ggagaatcgg gcgatggctc cgaagccggc gatcccatct ctgcccgcga acagatcgga
     8101 cagcatgccc ccaactggga acgtgccacc atctgtgtct ccagccaggt tggctgcgcg
     8161 gtgaattgcc agttctgcct caccgcgctg ctaggggtaa agcgcaatct cacggtcggc
     8221 gagatcgttg gccagatcgt cgccgtgctg aacgatcgcg gcgttgacct ggaacgacag
     8281 cgcgtgaacc tggtttttat gggaatgggg gagccattct tgaactaccc caacttcatg
     8341 aaagcggcac agcttctggt ggaaggggta ggtatccctg agtcgcgcat gactgtatcg
     8401 acttctggaa ttatcccgcg catctatgac ttcggcgctg aaccggtccg ccccaagctc
     8461 gcgatttctc tcaacgcccc taacgacgag ctccggaatc gcgtgatgcc cctgaatcgc
     8521 aaatgggacc tcacgcagct catgcaagcc gcgcgcgatt ttcctctgcg caaccgcgag
     8581 cgcatcacct ttgaatatgt tctgctggcg aatgtgaacg acgcgcccga gcatgcgcgg
     8641 caggtggtgg agctggtccg cgggatccgc tgcaaggtga atctcattgc gctcaacccc
     8701 ggaccgggaa tccactttgg tacgccggaa gagcagcgcg tccatgcctt ccagcagatt
     8761 ttgatcaaag ccggcattcc agcctttgtt cggcgccccc ggggccgtga catctatgcc
     8821 gcctgcggcc aactcaagcg gactgtggct taggcttctg gtcccgagcg gagagaagga
     8881 cgcattatca tcccgaggct tgaggtcggg aaactctgtt cgtactcata aaatccagag
     8941 ttgtagagcc ccactcacgc cctagatcgc actcgctttc cgggttagag gctcccgctc
     9001 gtgctccccg ccatcaatga ttcgagcgtc ttttctgcct gctcatgaag atccggtggc
     9061 gcaccgtaga gcacgcgcgc ggttttcccc gagcgatcaa acagaaacat tgttggaact
     9121 gaggtgatgt cgccgaacgc ctgggccgtt tgtgagtcgg tgatggccca gtgcagatcc
     9181 gggctgagtg ctgccaccgt ttccttgatc ttctcttccg gcgattccac cgccagcgct
     9241 acgatcgcga cgttatcgcc atatttctgt ttgagcgctc ccaaccattg cagcgtcgac
     9301 cggcatggcg gacaccacgt ggcccagaac tcaaccagca ccacgcgtcc ggcaagctga
     9361 tcggcactca gcggctggcc attcatgtca gtgactgtga acttgggaag cgagctgagc
     9421 tgcattgcgc tggcgctcac gttggcatgt tcacggctga ccacgtcttt gcggccggaa
     9481 aggatcaagt cgatcatgcg tgtgagatcg gatttgaact tctcctggct ttgcgcgttc
     9541 cgccatggcg catagcggcc ggtaccatct ttttccccga agtagccgaa atcgcgcggg
     9601 gctgctacca gcacatcgtc cacgaaaacc gcgggataac cctttacgcc aaatcggtcg
     9661 gccagctttg acgccccaaa gttctcactg acaaagttca cctgcccggg atatttggct
     9721 gccacttcct gtaccagcaa acttgctgga tcggagatgt ttcaagtgta gggccagcgc
     9781 accagagtga tgtcgaccgt cttggcggga gcacgcatga ccggagcagc gggtttgagt
     9841 gccgccgcgt aagcgggcag gacttgctca acaatcacgg cggcagcctt cagttcatca
     9901 tcctgcgact tcgatgcgtc atcatgagcc agatagttct gggcgcgttg caggaagagc
     9961 tgctgcatgg attcatcctg ctgggaagag gccaaagctt tcaatttttc agcaacagcg
    10021 gcccgcaatt tcttaagttt gtcggcgtcc ggcacaggcg tgtcaagcat gccgaaatga
    10081 cgcgtggctt ccagatacgc atatagtgct ccggcatagg agcggctgga atcgagctcc
    10141 tggcccagct ttagcgtcga gttcagcgca ataaagcgcg ggtgcatctc aatcgacttc
    10201 gggggaacga acgcagcatt caccttctgc tgcaggcgct gcaattccgg tagatatgac
    10261 cgcaaagcga gagcttctcc cttgcatggc acgttcaagc cgtagagaaa gctggaaaac
    10321 tctgcctggc ctgtcgcctc gcccatgtag agcaatccgt ccgccggttt tgtagacgtg
    10381 gcaaagccgc ggctgccttc cagcagcgga gtcactctac cttgcgcaac ttccgcaagg
    10441 gcgcgcatcg ccacgggggc accactccag tttcgctggc gggctttctc gtccagcgat
    10501 gtgagctcca gactcgcctt gttccactca gtttcaaatg caggaagacc gctgcccacg
    10561 gctgcggttt ttttctggat cgcgcgaacg ccattgatga ggtcggtggc gcgtcctaca
    10621 ttct
//
LOCUS       DASQYP010000380         4596 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_295059, whole genome shotgun sequence.
ACCESSION   DASQYP010000380 DASQYP010000000
VERSION     DASQYP010000380.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 4596)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4596)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4596
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_295059"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1453
                     /locus_tag="VE783_12460"
     CDS             <1..1453
                     /locus_tag="VE783_12460"
                     /inference="COORDINATES: protein motif:HMM:NF013069.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HYX54259.1"
                     /translation="RLEETEKLIARVEDDIRGVVPKNELGMIVSNIGVTPGFSSMYTS
                     NSGAHTATVQVNLQEGHKVGSYEYMDRVRRKLATDLPQVSTYFQTGGLVDAVLNLGLP
                     APIDLQIASSRLERSHDMAVQLAAKIRRVKGVSDVLIPQDVDYPALRLNIDREKASKL
                     GLSQREVVDNLITALSSNQMIAPSFWVDPKSGNDYMLTVQYREDEIKNLNDLSQIPLR
                     SGNAALPTQLSAVSEIDRVLSPTEVDHYQLSRVIDVYVSPSGEDLGAVSKRINEIVAQ
                     TKLPEGMRVTMRGMVQGMNASFRSFSIGLLLSVVLVYLILVAQFQSFKDPFIILLAIP
                     MGITGVLLMLWLSGTSLNVMSLMGVVMMVGIVVSNSILIVDFTRRLRADGMEMRKAVG
                     EACKVRLRPVLMTSLATIIGLIPMAMALGEGSESYAPLARAIIGGLTVSVVFTVFIVP
                     AAYLIVHGKEEPEGQGDSRETSSETHKPELQQV"
     gene            1465..2973
                     /locus_tag="VE783_12465"
     CDS             1465..2973
                     /locus_tag="VE783_12465"
                     /inference="COORDINATES: protein motif:HMM:NF014385.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HYX54260.1"
                     /translation="MKKKILLIAFSCAFFCVALGQAQVSTAPSILRLPDAPRVHEAAL
                     ASSLLEPSPGMPQQALTPAASGTTTQPNEPAKTGMPQQPAAMPAPRGQPQLPRLTLQD
                     AEAMALKNHPRITIAQLNALASLQVVREVRSGLLPTITSNTTAVGVYQDGNRITAGVL
                     NNPSVFQRAATGLTGSQLITDFGRSTSLTSSSRLHARAQQETALATREQIVYLVDQAF
                     YNALSAQVLVQVADSTVSARQVLVDQVQALEQAKLRSALDLSFAQVSLAQAQLLLVNA
                     KNNRDSAYAALSEALGLPDQKLFVLEDTLNAQNPAGDVENYIQTALQTRPDVKALEFE
                     ESSAQKFTTAEKRLQLPTVSALGAAGITPVRSDRLGNNGYGAVGVNMQIPVFNGFLFS
                     ARANEAELRARAAAERVRDFKDTVARQVRSAWLDANSAFERQQVAAKLLDQANLSLDL
                     AQARYKLGLSSIVELSQAQLQQTEAQISTVTAKYQYEVSLAVLAYQTGAISH"
     gene            3378..>4596
                     /locus_tag="VE783_12470"
     CDS             3378..>4596
                     /locus_tag="VE783_12470"
                     /EC_number="1.11.1.5"
                     /inference="COORDINATES: protein motif:HMM:NF015131.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c peroxidase"
                     /protein_id="HYX54261.1"
                     /translation="MKPSSGTTRAFLRITASVIAVVVALGYYSGVRAQSGVGSVVVPL
                     RPLAPLSSVPVPAVFGMEGILADKTAAIQLGKALFWDMQAGSDDIQACASCHFNAGAD
                     SRVNNDVNPGQAGGDNTFQIGPTVAGVMGPNHQYTAGSANAGFGGYHDGDFPFRKLSN
                     PEDRFSVISDVNDVSGSQGVFPTTIGQVVVGTVGANGQINQGGGSREVESGDDGDQGI
                     GTNYGPGARTRRPSKPLTSNTNPKSGKASGGNGQNSIIGTAPGNLTSVEVDNSVVDPV
                     FSYPDPSDASKRINTRRTTGRNTPSAVDAVFNFRNFWDGRAQNDCNGANPFGGRDQSS
                     HLVVVKDDGTLAPAMLSMKNSALCSQSLGPILSSTEMSADGRDFHQVGKKLLARVPLA
                     KQLVDPTDSVLGVL"
BASE COUNT          998 a         1298 c         1325 g          975 t
ORIGIN      
        1 gcggcttgaa gaaacggaaa agctgatagc gcgtgtggag gacgatatcc gcggagtagt
       61 gccgaaaaat gaactcggga tgatcgtctc caacatcggc gtaactccgg gcttctcctc
      121 catgtacacc agcaactccg gcgcgcacac ggccacggtg caggtcaacc tgcaggaagg
      181 ccacaaagtg ggcagctatg aatacatgga tcgggtgcgg cgaaagctgg caacagatct
      241 gccgcaggtg agcacgtact tccagaccgg cggtctggtg gacgcagtcc tgaacctcgg
      301 tctgccggcg cccattgatt tgcagattgc gtcaagccgg ctggagcgct cgcatgacat
      361 ggcggtgcaa ctggctgcaa aaatcagacg tgtcaaaggc gtgagcgatg tccttatccc
      421 gcaggatgtg gactaccccg cactgcgtct gaatatcgac cgcgaaaaag ccagcaagct
      481 ggggctctcg caaagggaag tagtcgataa tctcattacc gctctgagtt caaaccagat
      541 gatcgcacca agcttctggg tggatcccaa gagcggcaac gattacatgt tgaccgtgca
      601 gtatcgggaa gatgagatca agaatctcaa cgatctcagc cagatacccc tccgttccgg
      661 caacgccgcc ctaccaaccc agctctccgc agtgtccgaa atcgatcgcg ttctttcgcc
      721 gacggaagtc gaccattacc agttgtcgcg cgtgattgac gtctatgtct ctccctccgg
      781 tgaggatctg ggtgcggtga gcaaacgaat caatgagatc gtcgcgcaaa ctaaacttcc
      841 ggaaggcatg cgagtgacca tgcgcggcat ggtgcagggc atgaacgctt cattccggag
      901 tttttcaatc ggtctgctgc tctcggttgt gctggtttat ttgattctgg tggcgcagtt
      961 ccagtcgttc aaagacccgt tcatcattct tctggcaatc ccgatgggaa ttaccggagt
     1021 cttgctcatg ctctggctca gcggaacgag cctgaacgtg atgtcgctga tgggcgtggt
     1081 gatgatggtg ggaatcgtgg tgtccaactc cattctcatt gtggatttca cgcgccgtct
     1141 tcgggccgac ggcatggaga tgcgaaaggc cgtcggtgag gcctgcaagg ttcgtctccg
     1201 cccggtattg atgacctcac tagccaccat cattggcctt attccgatgg cgatggcgct
     1261 gggcgaaggc agcgaatcgt acgcgcctct ggcccgtgcg atcatcggtg gcctcacggt
     1321 ttctgtggta tttaccgtgt tcattgttcc tgcggcatat ctaatcgttc acgggaaaga
     1381 agagccggag gggcagggcg attccaggga gacctcatcc gagacgcata aacctgaact
     1441 tcagcaagtg tgactcctaa aaaaatgaag aagaaaattt tgcttatcgc attttcctgc
     1501 gcattttttt gcgtggcgct gggccaggcg caggtgtcca ctgctccaag cattctcaga
     1561 ctgccagacg cgcctcgggt acatgaggcg gctcttgcct cttcattatt agagccgtct
     1621 ccaggcatgc cgcagcaggc gcttacaccg gcggcttctg gaacaacaac gcaaccgaac
     1681 gaacccgcga agaccggcat gccgcagcaa ccagcggcca tgcccgctcc gcgtggtcaa
     1741 cctcaactcc cgcgccttac cctgcaggat gcggaagcta tggcactgaa aaaccacccg
     1801 cgcattacca ttgcccagct gaacgcgctg gcatcattgc aggtggtgcg cgaagtaagg
     1861 tcaggactgc tgcccaccat cacttcaaac accactgccg tgggtgttta ccaggatggg
     1921 aaccggatca ccgccggtgt gttgaataac cccagcgtgt ttcagcgcgc tgctaccggg
     1981 ctcacgggga gccagctcat cactgatttc ggacgatcca ccagcctcac ctcttcgtcc
     2041 agactccacg cgcgggccca gcaggaaacc gctctcgcca cacgcgagca gattgtgtat
     2101 ttggtggatc aggcgtttta caacgcgctc tccgcgcagg tactggtcca ggtggctgat
     2161 tccaccgtaa gcgcccgcca ggtactggtt gatcaggtgc aggcgctgga acaggcgaag
     2221 ctgcgttctg cgctggacct gagctttgcc caggtctcgt tggcgcaggc tcagctgctg
     2281 ctggtgaacg cgaagaacaa ccgcgattcc gcttatgccg cgctgagtga ggcgctgggt
     2341 cttcctgatc agaaactatt cgtgttggaa gacacgttga atgcacaaaa tccggccggt
     2401 gatgtagaga actatatcca gactgctttg cagacccgcc ctgacgtgaa ggccctggaa
     2461 tttgaggaga gctcagcgca gaaattcacc accgctgaaa aacggttaca gctaccaacc
     2521 gtcagcgcac tgggcgccgc cggaatcacc cccgttcgca gtgaccggct ggggaataat
     2581 ggatacggcg cggttggggt gaatatgcag attccggtgt tcaatggatt cctgttcagc
     2641 gcccgcgcga atgaggctga gttgcgggca cgcgcggccg ccgagcgtgt gcgcgatttc
     2701 aaagatacgg tcgctcgcca ggtccgcagc gcatggctcg atgccaacag cgcgttcgaa
     2761 cggcagcagg tcgcggccaa gctgctggat caggccaatc tctcactcga tctggctcaa
     2821 gcccggtata aactcggact gagttcaatc gtggagctca gccaggcaca attgcagcag
     2881 acggaagctc agatcagtac cgttaccgcg aagtatcaat acgaggtttc tctcgctgta
     2941 ttggcttacc agacgggagc catcagtcac tgaaattttc tgttctgctg attgcgcgct
     3001 cgcgtcctat ttaaggccgg gctgggacat ttccacgcct atctggttcc ggcacattgg
     3061 taatggtacc aaggtctcgt accaaatcgg ccattggtac agtgcttggt cttattaaga
     3121 acacccccca aatagcccta aagccactta tcttattaat gtaagactta cattcttaag
     3181 ctaataagat tacgacaagt atatgaagtt gctgctttta tttgcttttc gttgcttctc
     3241 gccaaacaat taaaacattt aactctggcc taatggacgc ctaatcgccc aaatagatac
     3301 tccccacagc ggctgagaac cgggccgact gctgtctggc accccccagg gaccgggcgc
     3361 aatgtgagga gaacaaaatg aaaccgtctt ccgggactac tcgggctttt ctacgcatca
     3421 cggcgtcggt aattgcagtt gttgtggccc tcggatatta cagcggagtt cgggcgcaaa
     3481 gcggcgttgg cagtgtggtg gttccgctgc gcccactggc tcccctttcc agcgttcctg
     3541 ttcctgccgt gtttgggatg gaaggaattc tcgcagataa aactgcagcc attcagcttg
     3601 gcaaagcgct gttctgggat atgcaggccg gcagcgatga cattcaggcc tgcgcgagct
     3661 gccatttcaa cgccggtgca gacagccggg taaacaacga tgtgaacccc ggccaggccg
     3721 gaggcgacaa cacctttcaa attgggccga cggttgcggg cgttatgggc cctaaccacc
     3781 agtacaccgc gggttcagcg aacgcgggtt tcggcggcta ccacgatgga gattttccgt
     3841 tccgcaagct gtcgaatcct gaggaccggt tctccgtcat aagcgatgtt aacgacgttt
     3901 ctggatctca gggcgtcttt cccaccacca tcggacaagt cgtggtgggt acggtcggag
     3961 ccaatggcca gatcaatcag ggtggaggat cgcgcgaggt agagagcggt gatgatggtg
     4021 atcagggaat cggcacaaat tatggacctg gtgcacgcac tcgccggccg tctaagccgc
     4081 tgacgtccaa taccaacccg aaaagcggca aggcaagcgg cggtaatggg cagaacagca
     4141 tcatcggaac ggctcccggc aacctgacca gcgtggaagt tgacaattcc gtggttgatc
     4201 cggtcttctc ctatccggat ccgtctgacg caagcaagcg catcaacacc cgcaggacca
     4261 ccggtcgcaa cacgccgagc gcggtggatg cggtgttcaa cttccgtaat ttctgggatg
     4321 gccgcgcgca gaatgactgc aacggcgcga acccgtttgg tggtcgtgac cagagctcgc
     4381 acctggtcgt ggtgaaggat gacggcacac tggcgccggc gatgctgagc atgaagaatt
     4441 cggctctctg ctcgcagtcg ctgggtccaa ttctgagcag cacggaaatg tcggccgatg
     4501 ggcgcgactt ccaccaggtt ggcaagaagc tcctggcgcg ggttccgctc gccaagcagc
     4561 ttgttgatcc aactgacagc gtcctgggcg tgctct
//
LOCUS       DASQYP010000381         7891 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_142457, whole genome shotgun sequence.
ACCESSION   DASQYP010000381 DASQYP010000000
VERSION     DASQYP010000381.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 7891)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7891)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7891
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_142457"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..351
                     /locus_tag="VE783_12475"
     CDS             <1..351
                     /locus_tag="VE783_12475"
                     /inference="COORDINATES: protein motif:HMM:NF016289.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M28 family peptidase"
                     /protein_id="HYX54262.1"
                     /translation="IGRPDAAVKPDQLWLTGFERSDLGPELAKHGAKLVADPHPEQHF
                     FERSDNFALARDGVVAHTVSSYGLHKDYHRPSDDPQHIDYAHMEKAIRSMMKPVKWLA
                     NSSFKPEWANGKKP"
     gene            470..1108
                     /locus_tag="VE783_12480"
     CDS             470..1108
                     /locus_tag="VE783_12480"
                     /inference="COORDINATES: protein motif:HMM:NF024701.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HYX54263.1"
                     /translation="MAVAQKHRAARKDARRPRGSRRPEASLRDQIRDTARELFAREGY
                     ESVSMRRIGAEVGCSPMAIYRHFPNKEELLLSICEETFDRLLVLLDRTRAKPGTPLEK
                     LRASVRAVVDFHLGHPNHYKVTFMTVMPPGPVADRKVGIGRRVMDRLRDGIRESAEAK
                     GITVDVEMTAQIVRAAIHGLASSLITTGKCYPWKEPERFKDEMIATVTRQFE"
     gene            1193..2815
                     /locus_tag="VE783_12485"
     CDS             1193..2815
                     /locus_tag="VE783_12485"
                     /inference="COORDINATES: protein motif:HMM:TIGR00711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_process: GO:0006855 - xenobiotic transmembrane
                     transport [Evidence IEA];
                     GO_process: GO:0009410 - response to xenobiotic stimulus
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DHA2 family efflux MFS transporter permease
                     subunit"
                     /protein_id="HYX54264.1"
                     /translation="MGTQALSQPVLLPQAQSQAAAKPAVNPWVIAITVTLATFMELLD
                     TSIANVSLPHIAGGLAVSYDESTWVLTSYLVANAVVLPLSAWLSRVFGRKNYYMACVA
                     LFVASSFLCGIAPSLGLLIFFRILQGVGGGGLAPVEQAILVDTFPGAKRAAAFALYSM
                     AIVTAPAVGPPLGGWITDHFSWRWVFFINVPIGLLSLVLTSRLVSDPPQFVEEVKAAR
                     IGGKLKIDYWGISLIALGFAALEIVLDKGQREDWLESRFIVTFLTVAITALVAAVIYE
                     WRHHDPVVEIQLFKERNFALSNALYFGFFFVVFGSTVLIPQILQSLYGYTATDAGLVL
                     GPGAFVIVMMAPVVVRLIPKTGAKKLILLGSVFTGLAMWRFSSLDLGSDYRSYALARA
                     IQGIGLGFFFVPVSSLAYSYLPLNKNNKASSITNLFRNLGGSFGVAFMTTMLERRAQF
                     HHSVIVQHLTPENPLFTERLQAITQYMAAAGASTADAGSKAYGLISGLADRQAAFLGA
                     MDCFYALGWVAVATFILALMTKPFRAGGPAGH"
     gene            2831..4300
                     /locus_tag="VE783_12490"
     CDS             2831..4300
                     /locus_tag="VE783_12490"
                     /inference="COORDINATES: protein motif:HMM:NF014385.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HYX54265.1"
                     /translation="MNRLYRSFIVAIVGWGLGAAAQQNSTAFELGSISTPRTINPAAN
                     STTPSSLAGQQQNPFLGSVPTGVATAEPLDLPFEDAIARGLRYNLGVIENQASLRQAQ
                     AQRLRTLSTMIPSVSGLLRQNLDDLNRVAIGLNIPAFPAATGQFGYQEAYLTFSDTGL
                     NLNSVYQYKASRLQAESQRYSLEDAANVVALAVGTAYLQVEASESRVGTAKAELDSAR
                     ELDEQATNRVKSGLAAEIEGFRAGVQYQTAQQRLTVATANLEKDKLTLARLIGLPSGQ
                     KFNATGKANYLPWSGGDLQAALLEARDHRADVKSADSASAASQLSKKAAQLERVPGVT
                     VNGYYGSIGKNLGRSDATYSLAATVSLPIFTGGRIRSDIHDASATADRRQAEHADLLG
                     RVDFEVRNAFTDLEAADSAVKVAEKNAELAQRTLDQARDRFLNGVTNNLEVIQAQQDV
                     AAANENYISSLFAHNLAKLTLLRAMGSAQKDLNKYLGGN"
     gene            4302..5627
                     /locus_tag="VE783_12495"
     CDS             4302..5627
                     /locus_tag="VE783_12495"
                     /inference="COORDINATES: protein motif:HMM:NF012739.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HlyD family secretion protein"
                     /protein_id="HYX54266.1"
                     /translation="MATQTQQHHPELVTEGLHPVAVDVPVAAELKADQQLETSEPEAA
                     PALPPKASFLKQPRFALIAAIAIVVLVTGTAAWSYLASYESTDDAQVDGHLHPVSARI
                     AGTILRVNPEVEDSHYVEAGTVLAVIDPADFQAERDRASADFERLNASSAAAQTDIAV
                     VSSGSTGRLDLARAAVSEAEDSIAAENASLDAARAKLAQAEANYSRAEADRQRYERLL
                     AKREISQSEYDRLATGAATDKEAVTAAKAEIVAAQKRISQAQSRLAQRKADLLAAKSA
                     PEQVDSSKAKAKAAQAEANRAKAQLTTAELNLGYTQIIAPVSGIVGRKTVEAGQRVQP
                     GQQLLTIIPVDDLWITANFKETQLRSMKPGQPVTIHSDSFAHDYHGHIDALGGATGSR
                     FSLLPPENASGNYVKVVQRVPVRVILDKGENADHRLRPGMSVEASVKLR"
     gene            5814..6782
                     /locus_tag="VE783_12500"
     CDS             5814..6782
                     /locus_tag="VE783_12500"
                     /inference="COORDINATES: protein motif:HMM:NF014336.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S1/P1 nuclease"
                     /protein_id="HYX54267.1"
                     /translation="MGRFARFTLLLLCVVSFQSVGFGWGCSGHQIVALIAERQLNDKA
                     AAQVQALLLNNTTLTLSKFCQTSLSPIAKYATWADDFKNTTAGSATKPWHFLDIPLTA
                     AAPPSPGDFCDQGCVTKAIEDSRKTLKSKTSTKAAKTKALAFLIHFVGDEHQPLHAST
                     NDDRGGNCFPVTYFGKKPKLSTSGTYSPELHGIWDKDILERIGNIKTGTRDDDVTQFV
                     DSLMSDFEEKFPSWSSAPIDVQAWAWESHQLATSESYGKLPVHVDPLQPVPVVQCTDD
                     NNIGQTLLNKNEKISQKYVSAVDDTIKEQLAKGGTRLAMVLNDIWH"
     gene            complement(6920..>7891)
                     /locus_tag="VE783_12505"
     CDS             complement(6920..>7891)
                     /locus_tag="VE783_12505"
                     /inference="COORDINATES: protein motif:HMM:NF014717.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HYX54268.1"
                     /translation="HAGVALAWPFEINGLNPIEREGKTLASTEQMPRAAFLRAGPGYF
                     EALGVPLLRGRAFTSNDRANEPAVAVVNEEFAHQFFGAQDPVGQHVRVHYPGEPQPTE
                     PWATIVGVVGATRSIRYDQIQWDRYPAIYTSMFQQQETGKMRRFDAEPFYFYVQGAAD
                     SRLLSAAVHAADPALPIGEVRSTGQVVSELRAQPRLRARMLGLFAVFTLLLAAIGVYG
                     VMVQFVEQRRREIGIRVALGALHQNIIRLILRRALILAGVGILAGIVGTAALTRVMRS
                     LLYNVSPLDPMIFAAVVGILAAVALLASYLPARRALKIEPTEALKAE"
BASE COUNT         1626 a         2436 c         2403 g         1426 t
ORIGIN      
        1 attggccgcc ctgatgccgc tgtaaagccc gaccagctct ggctgaccgg cttcgagcgc
       61 agcgatttgg gaccggagtt ggcaaagcac ggggcgaagc tggtcgccga tccgcatccg
      121 gagcagcact tcttcgagcg gtcagataac tttgctctcg cccgcgatgg cgtggtcgcc
      181 cataccgttt ccagctacgg cttgcacaag gattaccatc gccccagcga cgacccgcag
      241 catattgact acgcgcacat ggaaaaggcc atccgctcca tgatgaaacc cgtgaagtgg
      301 ctggccaact caagctttaa gccggagtgg gcgaatggga aaaagccgta gcgtctctgc
      361 atcgcggcaa aactggagct caggataaaa ctcttgaccc gccgatgttt acggtgtaca
      421 cgtattttgc atctctagtg ccggtcgata cgtcttatta gttactccta tggcagtggc
      481 acaaaaacat cgggcagcgc gaaaagacgc gcggcggccc cgcggaagcc gccggccgga
      541 agcctcgctt cgcgaccaga tccgggacac cgcccgggaa ctctttgccc gcgaaggcta
      601 tgagagcgtc tccatgcggc gcatcggcgc cgaggtcggc tgctcgccca tggccatcta
      661 tcgccacttt cccaacaagg aagagctgct gctctccatc tgcgaagaga cctttgatcg
      721 cctgctggtg ctgctggacc gcacgcgggc aaagccgggc acgccgctgg agaagctgcg
      781 ggccagcgtg cgcgcggtgg tcgacttcca cctgggccac cccaaccact acaaagtcac
      841 cttcatgacc gtgatgccgc cgggtccggt ggcggaccgc aaagtcggca tcggccggcg
      901 cgtgatggac cggctgcgcg acggcatccg cgaatccgct gaagccaaag gcattaccgt
      961 ggacgtggag atgaccgccc agatcgtccg cgcggccatc cacggcctgg ccagctcgct
     1021 catcaccacc ggcaagtgct atccctggaa agagccggaa cggttcaaag acgagatgat
     1081 cgccaccgtg acccgccagt tcgaataaca gaatattttt ttgcatcggt gcgtacagcg
     1141 tacacatctg atatcgccat gaagtatacg gtgtaaacaa ggagccggtc aggtgggcac
     1201 gcaggcgctt tcgcaaccag tactacttcc gcaggcacag tcgcaggccg cggccaaacc
     1261 ggccgtgaat ccctgggtca tcgccatcac cgtgacgctg gccaccttca tggaactgct
     1321 cgataccagc atcgccaacg tctctctccc ccacattgcc ggcggcctgg ccgtgagtta
     1381 cgacgaaagc acctgggtgc tgaccagcta tctggtagct aacgccgtgg tactgccgct
     1441 gagcgcgtgg ctcagccgtg tctttggccg caagaactat tacatggcct gcgtggcgtt
     1501 gtttgtggcc agcagttttc tctgtggcat tgctcccagc ctgggactgc tgatcttctt
     1561 ccgcattctg caaggcgtag gtggaggcgg gctggctccg gtggagcagg ccatattggt
     1621 tgacaccttc cccggcgcca agcgcgcggc ggccttcgcg ctctacagca tggccattgt
     1681 caccgcgccg gccgtgggtc cgccgctggg cggctggatc actgatcatt tctcctggcg
     1741 ctgggtcttc ttcatcaacg tgcctatcgg cctgctgagc cttgtgctga ccagcaggct
     1801 ggtctctgat ccgccgcagt ttgtggaaga ggtgaaggcg gcgcgcatcg gcggcaagct
     1861 caagatcgac tactggggca tctcgctcat cgctctcggc tttgccgcgc tcgaaatcgt
     1921 actggataaa ggacagcgcg aagactggct ggaaagccgc ttcatcgtca ccttccttac
     1981 cgtcgcgatc acggcactgg tggcggcggt catttatgaa tggcggcacc acgatcccgt
     2041 cgtcgagatc caactgttca aggaacgcaa cttcgccctc tccaacgcgc tctacttcgg
     2101 tttcttcttt gttgtgttcg gcagcacggt gctgatcccg cagattctgc aatcgctcta
     2161 tggctacacc gcaaccgacg ctggcctggt gcttggcccc ggcgcattcg tcatcgtgat
     2221 gatggcgccg gtggtggtgc ggcttattcc caagaccggc gcgaaaaagc tgatccttct
     2281 tggctccgtc tttaccggcc tggccatgtg gcgtttttcg tcgcttgatc ttggctccga
     2341 ctatcgcagc tacgcgctgg cccgcgccat ccagggcatc ggcctcggct tcttctttgt
     2401 gccggtgagt tcgctcgcgt attcgtactt accgctgaac aagaacaaca aggcttccag
     2461 catcaccaac ctgttccgca acctgggcgg cagctttggc gtggccttca tgaccaccat
     2521 gctggagcgg cgcgcgcagt ttcatcacag cgtgatcgtg cagcacctga cgccggagaa
     2581 tccgctcttt accgaaaggc ttcaggcgat cacgcaatac atggccgccg ccggcgcaag
     2641 cacagccgac gcgggaagca aagcttatgg cctgatttcc ggcctggccg accggcaggc
     2701 tgcattcctc ggcgccatgg attgctttta cgcgctggga tgggtcgccg ttgccacgtt
     2761 cattctggcg ctgatgacca agccgttccg cgccggtggt ccggccgggc actgatgcag
     2821 gagattaaac gtgaaccgtc tttataggag tttcatcgtt gcgatagttg gctggggact
     2881 cggcgcggcg gcgcagcaga actcaactgc atttgagttg ggcagcatct ccacgccgcg
     2941 caccattaat cccgcggcca acagcaccac gccaagctcg ctggccgggc agcagcagaa
     3001 tccttttctg ggcagcgtgc ccacgggcgt cgcaaccgca gaaccgctgg accttccttt
     3061 tgaagatgcc attgcacgcg gactgcgcta caacctgggc gtgattgaga atcaggcgtc
     3121 gctgcggcag gcgcaggcac aacggctgcg cacactttca acgatgattc cgagcgtctc
     3181 cggcctgttg cgccagaacc tcgacgatct caatcgtgtc gccattggcc tcaacatccc
     3241 tgcctttccg gcagctacgg gacagttcgg ttatcaggag gcctatctga ccttctccga
     3301 taccgggctg aacctcaact ccgtttatca atacaaggca tcgcggctgc aagcagaatc
     3361 gcaacgctac tcgctggaag atgcagccaa cgtggttgcg ctcgccgtcg gcaccgcata
     3421 cctccaggtg gaagccagcg agtcgcgcgt cggaacggcg aaggctgaac tcgattcagc
     3481 gcgcgagctg gacgagcagg cgacgaatcg cgtgaagtcc ggcctggcag cggagattga
     3541 aggcttccgc gccggagtgc agtaccagac cgcccagcag cgcctcaccg tagccacggc
     3601 aaatctggaa aaagacaaac tgactctggc gcgcctcatc gggctgccga gcgggcagaa
     3661 gttcaacgcc acgggcaagg caaactacct gccctggagc ggcggcgatt tgcaggcagc
     3721 gctgctggag gcgcgtgatc atcgggccga cgtgaagagc gccgactcag cttccgcggc
     3781 ctcacagctc agcaagaagg ccgcgcagct ggagcgcgtg ccgggcgtca ccgtgaacgg
     3841 ctactacgga agcattggga agaaccttgg ccgctcagac gcaacctatt cccttgccgc
     3901 aaccgtgagc ctgccgatct ttaccggcgg gcgcatccgc tccgatatcc atgacgcttc
     3961 tgccactgcc gaccgtcgcc aggccgagca cgctgacctg ctgggccgcg tggattttga
     4021 ggtccgcaac gccttcaccg atctggaggc agcggatagc gcagttaaag tcgcggagaa
     4081 gaacgccgag ctcgcgcagc gtacgctcga ccaggcgcgc gaccgcttcc tgaacggcgt
     4141 gaccaacaat cttgaagtga tccaggcgca gcaggacgtg gctgccgcca atgaaaacta
     4201 catctccagc ctgttcgcgc acaacctggc caagctgact cttctacgcg caatgggctc
     4261 ggcacaaaaa gatctgaaca agtacctggg aggaaactga catggctacg cagacgcagc
     4321 agcatcatcc ggaactggtg acggaaggac ttcatcccgt ggcggtagac gtgcccgtgg
     4381 cggcggaact gaaagccgat cagcagctcg agacatccga gccggaagcc gcaccggcgt
     4441 tgccgccaaa agcatcgttc cttaaacagc cgcgctttgc cttgatcgcg gccatcgcaa
     4501 tcgttgtact ggtgaccggc acggcggcgt ggtcttatct tgcgtcttac gaatcgactg
     4561 acgacgcgca ggtggacggg catcttcatc cggtgagcgc gcgcatcgcc ggaaccattc
     4621 tccgcgtcaa tcccgaagtc gaggacagcc attacgtgga agccggcaca gtgctggcgg
     4681 tgattgatcc cgccgacttc caggcagagc gcgatcgcgc cagcgccgac tttgaacgat
     4741 tgaacgcaag ctcagccgcc gcgcagacgg acatcgctgt tgtatcgtcc ggcagcaccg
     4801 gccggctgga tcttgcaagg gcagccgtaa gcgaagccga ggattccatt gccgcggaaa
     4861 atgcctcact cgacgcggcg cgggcgaagc tggcgcaggc agaagcgaac tactcgcgcg
     4921 cagaagccga ccgccagcgc tatgagcggc tgctggccaa gcgcgagatc tcgcaatcgg
     4981 aatacgaccg gctcgccacc ggagcagcca cggacaaaga agcggtaacc gccgccaaag
     5041 ccgaaatcgt tgccgcgcag aagcggatct cacaggcgca gagccggctg gcgcaacgca
     5101 aagctgatct acttgccgca aagtcggcgc ccgagcaggt tgattcttca aaagcaaaag
     5161 ccaaagcggc acaggccgag gcaaatcgcg cgaaagcgca gctcaccacc gccgaactca
     5221 acctgggcta cacacagatc atcgccccgg taagcgggat cgtcggccgc aagacggtgg
     5281 aagcaggaca gcgcgtccag ccgggccagc agttgctcac catcatcccc gtggacgacc
     5341 tctggatcac cgccaacttc aaagaaacgc agctgcgcag catgaagccc gggcagccgg
     5401 tgaccatcca ctccgattca ttcgcgcacg attatcacgg acacattgac gcgctgggcg
     5461 gcgccaccgg ctcgcgcttc agcctgctgc ctccggagaa cgccagcggc aactatgtga
     5521 aggtggtgca gcgcgtgccg gtgcgggtca tactggacaa gggcgagaac gctgaccatc
     5581 gcttgcggcc gggcatgtca gtagaggcga gcgtgaagct gcggtaacgg tttccaccca
     5641 acacttcgcc agcagggcga agtgtgggct cgaggctcga cgcccagcgg cccggttttc
     5701 tgcgatcctg ttcgggaatc cggcaagctg aactttaatg ttgcgttctc cgcgcctggg
     5761 agtatgcttt cactccacac cccctaaaac tttggctccg gagaatgata tttatgggcc
     5821 gattcgctcg ttttaccctg ctgttgctgt gcgtggtcag cttccagagt gttgggtttg
     5881 gctggggctg ttccgggcac cagattgttg cgttgatcgc cgaaaggcag ttgaatgaca
     5941 aggctgccgc gcaggtacag gcgctgctgc tgaacaacac caccctcacc ctttccaagt
     6001 tctgccaaac cagcctgagc ccgattgcga agtatgcaac gtgggctgac gacttcaaga
     6061 acacgaccgc agggagcgcc acaaagccgt ggcatttcct ggatatcccg ctcactgccg
     6121 cggcgccgcc ttcgcccggt gatttctgtg atcagggctg cgtgacaaag gctattgaag
     6181 attccaggaa gaccctgaag tcaaaaacct caaccaaggc cgccaaaacc aaggccctgg
     6241 ccttccttat ccattttgtg ggcgacgagc accaaccgct gcacgcttcc accaatgacg
     6301 accggggcgg caactgcttt ccggtgactt atttcgggaa gaagcccaag ctcagcacca
     6361 gcggcacata ctcacctgag ctgcacggaa tatgggacaa ggacattctg gagaggatcg
     6421 gaaacatcaa gaccggcacg cgcgatgatg atgtgactca gttcgtggac tcgttgatga
     6481 gcgacttcga agagaagttt cccagctgga gttcagcccc gattgacgtg caggcgtggg
     6541 cctgggaaag ccatcagctt gcgaccagcg agtcctatgg caagctgccg gtgcacgtgg
     6601 acccattgca gcccgtgccg gtagtgcaat gcacagatga caacaacatc ggccagacgc
     6661 tgctgaacaa gaacgaaaaa atcagccaga aatacgtaag cgcagtggac gatacgataa
     6721 aagagcagtt ggccaagggc ggcacgcggc ttgccatggt gttgaacgac atctggcact
     6781 aggaatatct gaccggcccg ccattcctgg ggacgggaaa acggcgggcc ggggaacaga
     6841 tagatgcgcc aggactctaa tccgactggc taagaaggac ggcggagaag gagattgtca
     6901 ccgtgcgctc gccgtgtctc tattctgctt tcagcgcctc agtgggttcg attttcaaag
     6961 cgcggcgcgc aggcaggtag ctggccagga gagcgactgc cgcaagaatg ccgacgacag
     7021 cggcgaagat catggggtcg agcggtgaaa cgttgtagag caggctgcgc atcactcggg
     7081 taagcgcggc ggtgccgacg atgccggcga gaatgccgac gcccgcgagg atcagcgcac
     7141 gccgcaggat aagccggatg atgttctggt gcagcgctcc cagggcgacg cgaataccga
     7201 tctcgcggcg gcgctgctcc acgaactgga ccattacgcc ataaacgcca atggcggcca
     7261 gcagcagggt gaaaacagca aagaggccca gcatgcgggc gcgaaggcgc ggctgggcac
     7321 gcaactcgct cacgacctgc ccggtgctgc gcacttcgcc aatggggagc gcgggatcag
     7381 cggcgtggac ggcagcggag agcagacgcg aatcggctgc gccctgaacg tagaagtaga
     7441 aaggctcagc gtcaaagcgg cgcatcttgc ccgtctcctg ctgctggaac atagaggtgt
     7501 agatggccgg gtagcggtcc cattgaatct ggtcatagcg gatggagcgc gtggcgccga
     7561 caacgccgac gatcgtcgcc catggctcgg tgggctgcgg ctcaccggga taatgcacgc
     7621 ggacgtgttg gcccactgga tcttgcgcac caaagaactg gtgcgcgaac tcttcattca
     7681 ccaccgcgac ggccggctca ttggcgcgat cgttggaggt gaaggcgcgt ccacggagca
     7741 ggggaacgcc caatgcttcg aagtagcccg gcccggcgcg gaggaatgca gccctgggca
     7801 tttgctcggt ggaggccaag gtcttccctt cacgctcgat tgggttgagg ccgttgattt
     7861 cgaatggcca cgccagagcc acaccggcat g
//
LOCUS       DASQYP010000382         2530 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_165565, whole genome shotgun sequence.
ACCESSION   DASQYP010000382 DASQYP010000000
VERSION     DASQYP010000382.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 2530)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2530)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2530
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_165565"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>2530
                     /locus_tag="VE783_12510"
     CDS             <1..>2530
                     /locus_tag="VE783_12510"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX54269.1"
                     /translation="ATLAGCFPTGNQAAAVSALSKFGPWGITAGNPTVRPSAQPTVTG
                     CPGVLFGGVTRVLQTPSHGFDFVEKMDAQLTGNDTITGRYIFNRGNSFNTQDNGAAGY
                     VVNVLALSQSALVSWTHNFSSHMVNESRVAFGRLNVGFGGNSIGNTDPTPGNLEQALA
                     SITISGGLGFGPANNLPQARIVNTWQGQDNWNYVMGRHQIKAGVNFTYQRSPNIFLPG
                     INGIYQFQNFSSYFSNTPLAITIANGNPVSDFREYDTFLYGGDDWKITKNLTLNLGLT
                     WSYYGQPANLFHDETLARESGSGGFWNPALPIGVRTFPELPAPKNSFGPAVGFAYSPQ
                     WGGFLTGNGKTVIRGGFRELYDPAFYNIYLNIASATPVVFNQSVANAGTHPLPAVPTG
                     PNVRSALASSVTPGVFDPRTFNQSTVTPDFSPDRVYSWSFGVERQIGHDSVFEVRYAG
                     NRGTNLFQSINGNPFVGTATNPGLAQVFPNLLPAGVSACTATQQVLGPGQTVGTDVGR
                     AACGNGLVRVRSNTSYSDYHAVQAEFRSSNLFKQLNLRAGYTFSKTTDNVSEIFGTNT
                     AGNNVAFSQNPFDFKNGEHSISGLNIPNAFTVNFFETLPFFREQHGFLGHLLGGWQFS
                     ADYIWASGQPYTVQQLADARVSDGAFSNGVCPPAAPNPANPCIKLAAFGNFYDNNFVA
                     AFVGGVDSARAFIGNPNAPQSAVGVFAGDYCLAFQQLIPAPNQPPSATNPLKTAVCNT
                     NNMNPNTLLSLNALNNGGVITPVTKDQVRFIVNARFAQQIFGTPFGNSPRNALTDAPS
                     NIANASIIKGFKLGEHANFEMHLTANNVFNHFNFANVDPFLDDAG"
BASE COUNT          553 a          760 c          670 g          547 t
ORIGIN      
        1 gctacgctgg ctggatgctt cccgaccggc aaccaggcag cggcggtttc agcgctctcc
       61 aagtttggcc cctggggaat tacagccggc aatccgaccg tacgtccttc ggcgcaaccg
      121 acggttactg gatgtccagg agtcctgttc ggcggagtta cacgcgtact ccaaactccg
      181 tcccacggtt ttgatttcgt ggaaaaaatg gacgctcagc tcaccggtaa tgacaccatc
      241 accgggcggt acatattcaa ccgtggcaac agcttcaata cgcaggacaa cggcgctgcg
      301 ggctacgtgg tcaacgtgct ggccctgagc cagagcgcgc tggtgagttg gacccataac
      361 ttctccagcc acatggtgaa tgagtcgcgc gttgcttttg gccgcctcaa cgtcggattc
      421 ggtggaaaca gcattggcaa taccgatccc acgccaggaa accttgaaca ggcgctcgcc
      481 tccatcacca tctctggcgg gttaggattt ggaccggcaa acaatcttcc ccaggcacgc
      541 atcgtgaata cctggcaggg acaggacaac tggaattacg tgatgggccg ccaccagata
      601 aaggctggcg tgaactttac gtaccagcgt tcacccaaca tcttcctgcc cggcataaac
      661 ggtatttacc agttccagaa cttcagcagt tacttcagca acacgccttt agcaatcacc
      721 attgccaatg gcaatccggt aagcgacttc cgcgagtacg acactttctt gtacggtggc
      781 gacgactgga agatcacgaa aaacttgact ctgaacctgg gactcacatg gtcgtattac
      841 ggtcagccgg cgaacctgtt ccacgacgag acgctggcgc gcgagagcgg ttcgggcggt
      901 ttctggaatc cggctctacc catcggagtt cgcaccttcc ccgaattgcc agctcccaag
      961 aacagctttg gcccggcggt gggctttgcc tattcgccgc agtggggcgg attcctgaca
     1021 ggcaatggca aaaccgtcat ccgcggggga ttccgtgaac tatacgatcc cgcgttttac
     1081 aacatttacc tcaacatcgc gagcgcaact cccgtggtgt tcaatcagtc cgtggccaac
     1141 gccggcacgc acccgcttcc cgcagtgccc accggcccga atgtgcgctc ggcactggcc
     1201 tcctcagtca ctcctggagt cttcgacccg cgcaccttca atcagagcac cgtcacaccg
     1261 gacttttctc ctgaccgcgt gtacagctgg agctttgggg ttgagcgcca aatcgggcat
     1321 gactccgtgt tcgaagtgcg ctacgccggc aaccgcggaa ccaacctgtt ccagtccatc
     1381 aacggcaacc cattcgtggg caccgccact aatccgggtc tggcgcaagt gttcccgaat
     1441 ctgctcccgg caggtgtgag tgcctgcact gcgacacagc aggtactggg acccggacaa
     1501 acggtgggta cggacgtggg tcgcgcagct tgcggcaacg gcttggtgcg cgtgcggtcc
     1561 aacacctcgt attccgatta tcacgcggtt caggcggaat tccgcagtag caacctcttc
     1621 aagcagttga atctgagggc gggatatacc ttctccaaaa ctacagacaa cgtcagtgag
     1681 attttcggca cgaatactgc cggaaacaac gtggcgtttt cgcagaaccc gtttgatttc
     1741 aaaaacggtg aacactccat ctcgggtctg aacattccga acgccttcac ggtgaacttt
     1801 ttcgagactc tgccattttt ccgtgagcag cacggattcc tgggtcatct gctcggagga
     1861 tggcagttct cggcggatta catctgggcc tctggccagc cctatacagt gcagcaactg
     1921 gctgatgctc gcgtttcgga tggcgccttc agtaatggag tgtgcccgcc ggcggcacca
     1981 aacccggcaa acccgtgtat caagctggcc gcattcggca acttttatga caacaacttc
     2041 gtagctgcct tcgtaggcgg cgttgattct gcgcgggcgt ttatcggtaa tccgaatgcg
     2101 cctcagagtg cggtgggggt tttcgctgga gactattgcc tcgcgttcca gcaacttatt
     2161 cccgccccga atcagccgcc ctccgcaacc aatccgctca agacggcggt ttgcaataca
     2221 aacaacatga acccgaacac gctgcttagt ttgaatgcgt tgaacaacgg cggcgtcatc
     2281 acgccagtga caaaagacca ggtacgattt atcgtcaacg cacggtttgc gcagcagatt
     2341 ttcggcacac ccttcggtaa ctcgccgcgt aatgctttga cggatgcacc atctaatatc
     2401 gcaaacgcgt cgatcatcaa aggattcaaa ctcggtgagc acgccaactt tgaaatgcac
     2461 ttgacggcga acaatgtctt caatcatttc aattttgcta atgtggaccc gttccttgat
     2521 gacgcaggta
//
LOCUS       DASQYP010000383         3721 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_165576, whole genome shotgun sequence.
ACCESSION   DASQYP010000383 DASQYP010000000
VERSION     DASQYP010000383.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 3721)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3721)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3721
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_165576"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..436)
                     /locus_tag="VE783_12515"
     CDS             complement(<1..436)
                     /locus_tag="VE783_12515"
                     /inference="COORDINATES: protein motif:HMM:NF012958.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase-fold protein"
                     /protein_id="HYX54270.1"
                     /translation="MRIRSLLTGLLALLLGCKSQPPAPPDHPRLSPSVRLQDVTFHSA
                     ALGRSMEYRVVLPAELSPGQSLHVIYLLHGGGGGFRDWTNYSDVAHYADEGILLVMPE
                     GESSYYMNSATRVQDRFEDYITHDLIADVEEKFPVRRQGEDRA"
     gene            complement(443..1573)
                     /gene="menC"
                     /locus_tag="VE783_12520"
     CDS             complement(443..1573)
                     /gene="menC"
                     /locus_tag="VE783_12520"
                     /EC_number="4.2.1.113"
                     /inference="COORDINATES: protein motif:HMM:TIGR01928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016836 - hydro-lyase activity [Evidence
                     IEA];
                     GO_process: GO:0009234 - menaquinone biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="o-succinylbenzoate synthase"
                     /protein_id="HYX54271.1"
                     /translation="MRIEAVTLREIQMPLVHFFETSFGRTTERRILIVTLHTNGPEGW
                     GECVAGEDPFYSEESIDTAWYAIERYLAPALLGKKAERGTDAPALFARVRGHRMAKGA
                     IENALWDAEAQEKRLPLWKLLGGSQEKIACGVSIGIQNSLDQLMEKIETELAAGYRRI
                     KIKCKPGWDVEAFERIRARWQEILLSCDANSAYTLEQVEHLKTFDRFGLLMIEQPLWH
                     DDFYFHAQLQRQLKTALCLDEAIHNRRDARASIELGACRIINIKVGRVGGFSEAVAIH
                     NVAQQNKIPVWCGGMLESGIGRAHNIALSTLANFTLPGDVSASKRYWKEDIIEPAVQV
                     SADGFITVPQTHGRGFQLRADLIEKLTVRKQTLRAGASSAAD"
     gene            complement(1570..2367)
                     /locus_tag="VE783_12525"
     CDS             complement(1570..2367)
                     /locus_tag="VE783_12525"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX54272.1"
                     /translation="MSATTPVTERVTIRKCETIADMQACVALQKEVWNFDDIDLIPLR
                     MFVVSQKIGGQIIGAFDGEALVGFAFSIPGSRNGHAYLHSHMLAVRNPYRNYGLGRSL
                     KLAQREDAIQKGVELLEWTFDPLEIKNAHLNLVKLGAIVRRYSVNHYGFSSSPLQGGL
                     PTDRLVAEWWLASRRVTDLLEKGHPPRVKIEERIHVPAEIYAWKASDANRPKAAEVQR
                     RNREQFLNAFRAGLVVLGYERDANDNGTFLLGPWDESWSYASDGETE"
     gene            complement(2364..3245)
                     /gene="mazG"
                     /locus_tag="VE783_12530"
     CDS             complement(2364..3245)
                     /gene="mazG"
                     /locus_tag="VE783_12530"
                     /EC_number="3.6.1.9"
                     /inference="COORDINATES: protein motif:HMM:NF007113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside triphosphate pyrophosphohydrolase"
                     /protein_id="HYX54273.1"
                     /translation="MSTGEKFERALAIMARLRAPGGCPWDREQTFDTIKKYTLEETYE
                     VLEAIENRDWPELTEELGDLLLQVLFYAEMAKEERLFAIDDVLDALSNKLIGRHPHVF
                     GDVKAEDAQQVLKNWEALKKEEKQRKASLNGRAETDANAQESGLLEAVSRKMPALMEA
                     QKISSKAAHIGFDWPDVEGIFEKLAEETNELREHVQQLPQEALAPQGQSKVPPDIQAR
                     LEDELGDLFFVLVNLARRLAVDPESALRSTNRKFRQRFGWLERELRSQGRHPEDSTLD
                     EMESLWQQAKTSEEGGR"
     gene            3303..>3721
                     /locus_tag="VE783_12535"
     CDS             3303..>3721
                     /locus_tag="VE783_12535"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX54274.1"
                     /translation="MLRIVPGKSGTVKLSQFLARPRDLLLNALEARKLLPIAFLMMLG
                     FLILLAWNGYTTTSELLSSQAYVQRTHQVLHEMDGVEDSIQDAREAWLHYILTPEPQD
                     VVSFEDAQVRTWTGLDHMLNLDPEHQAAVRNIQDLVR"
BASE COUNT          742 a         1119 c         1022 g          838 t
ORIGIN      
        1 tggcccggtc ttctccttgc ctccgcactg gaaatttctc ctccacgtca gcaatcaggt
       61 catgagtgat gtaatcctcg aatcggtcct gaactcgcgt tgctgagttc atgtaatagg
      121 aagattcacc ttcgggcatc acaagaagga tgccttcatc tgcatagtgg gccacgtccg
      181 agtagttcgt ccaatcccgg aagcctccgc cacccccatg cagcagataa atcacatgga
      241 gactctggcc gggagataat tccgccggca atacgacgcg atattccatc gagcgcccaa
      301 gggcggcgct gtggaatgtg acatcctgaa ggcgaactga cgggctcagg cgtggatgat
      361 cgggaggcgc cggcggttgc gatttgcagc cgagcagcag cgccaacagg cctgtgagca
      421 gcgaacgtat gcgcacagtc gttcagtctg ccgcgctgct cgcgccggca cgcagcgtct
      481 gcttgcgcac agtgagcttt tcgatcagat cagctctcaa ttggaagccg cgtccatgag
      541 tctggggaac ggtgatgaag ccatcggcgg aaacctgcac tgccggttca atgatgtcct
      601 ctttccagta gcgctttgac gccgatacat ctccgggcag agtgaaattg gccagagtgg
      661 agagcgctat gttgtgcgca cgcccaatgc cgctttccag catgccgccg caccaaaccg
      721 gtattttgtt ctgctgagca acattgtgga tcgccaccgc ttcactgaag cctcccacgc
      781 ggccgacttt gatgttgatg atgcggcagg cgccaagctc gatcgaggcc cgcgcgtcgc
      841 ggcggttatg gatggcctca tcaaggcaga gagccgtctt taattgtctt tgaagctgcg
      901 cgtggaagta gaaatcgtca tgccagagcg gctgctcgat catgaggagg ccgaaccgat
      961 caaaggtctt caggtgttcc acttgttcca gcgtgtaggc ggaattggca tcacaactga
     1021 gcaggatttc ctgccagcgc gcgcgaatcc gttcaaaagc ctcaacgtcc cagcccggct
     1081 tgcacttgat tttgattcgc cgataccccg ccgccagttc ggtttcaatc ttctccatca
     1141 gttgatcaag tgaattctga atgccgatgg atacaccgca cgcgatcttt tcctgtgagc
     1201 cgccgagcag cttccacaac ggcaagcgct tctcctgcgc ctcagcgtcc cacagcgcgt
     1261 tctctatcgc gcctttggcc atgcgatggc cgcgaactcg ggcaaacagc gccggagcat
     1321 ccgtgccccg ttccgctttc ttacccagca gcgccggcgc gagatagcgc tcaatggcgt
     1381 accacgccgt atcgatggac tcttcgctgt aaaaaggatc ttctcccgcc acgcactcgc
     1441 cccagccttc cgggccattg gtgtgcagcg tcacaatcaa gatgcggcgc tcggtggtgc
     1501 gcccgaaact ggtctcaaag aaatgcacca gcggcatctg aatttcgcgc agcgtcacag
     1561 cttcaattct cattcggttt ctccgtcaga ggcgtacgac caactttcat cccaggggcc
     1621 gagcagaaat gtgccgttat cgtttgcatc acgttcgtaa ccgagcacaa ccaggcctgc
     1681 acggaaggcg ttgagaaact gttcgcggtt tcgtctctgc acttctgccg ctttgggacg
     1741 gttcgcatcg gaggccttcc aggcgtaaat ctccgcaggc acgtggattc tctcttcgat
     1801 tttgaccctg ggcgggtggc ccttttcgag cagatcggtg acgcgccgcg acgccagcca
     1861 ccactccgcc accagccgat ccgtcggcag cccgccctga agtggcgacg aggaaaaccc
     1921 gtaatggttg acactgtaac gccgcacaat agccccgagc ttcaccaagt tcaggtgcgc
     1981 attcttgatc tccagaggat caaaggtcca ctccagcagt tccacgcctt tctggatcgc
     2041 atcttcgcgc tgggccagtt tcagactgcg ccccaatcca taatttcggt atgggttgcg
     2101 gaccgcgagc atgtgcgaat gcaggtaggc atggccatta cgtgaaccgg gaatggagaa
     2161 ggcgaaacca acaagcgctt cgccatcaaa cgcgccaatg atctgcccgc cgatcttctg
     2221 gctgaccacg aacatccgca gtggtatgag gtcaatatcg tcaaaattcc agacctcttt
     2281 ttgcagtgcc acgcaggcct gcatgtcagc tatggtttcg cacttgcgga tggtgacgcg
     2341 ctccgtgaca ggtgtggtgg cgctcaacgg ccgccctcct cagacgtttt ggcttgctgc
     2401 cagagtgatt ccatttcgtc cagcgtagag tcttcgggat gcctgccctg gctgcgcagc
     2461 tcgcgttcca gccagccaaa gcgctgtcgg aatttgcgat tggtactgcg cagcgctgac
     2521 tcaggatcta ccgcaagccg gcgcgccagg ttcaccagca caaaaaaaag atcgcccaat
     2581 tcatcttcca gtcgggcctg gatatcagga ggaacttttg attggccttg cggcgcgagt
     2641 gcttcctgcg ggagctgctg cacatgttct cgcagttcgt tcgtctcttc tgccagcttc
     2701 tcaaaaattc cttccacgtc cggccagtca aacccgatgt gagcagcttt tgagctgatc
     2761 ttttgcgcct ccatcagggc gggcatcttg cgcgagactg cctcaagaag gccagactct
     2821 tgtgcgttgg catcggtctc agcacggccg tttaaggagg ctttacgctg cttttcctct
     2881 ttcttcaggg cctcccagtt tttcaggact tgttgcgcgt cttccgcctt cacgtccccg
     2941 aaaacatggg gatgccggcc tatgagtttg ttgctgagcg catccagtac gtcatcgatc
     3001 gcaaataggc gctcttcttt cgccatttca gcgtaaaaga gtacctgaag tagcaagtcc
     3061 cccagctctt ccgtcagctc cggccagtcg cgattctcaa tggcctccaa cacctcgtaa
     3121 gtctcttcta atgtgtattt tttgatggtg tcgaaggttt gctcgcggtc ccaggggcag
     3181 ccgccggggg cgcgcagccg agccataatg gctagtgcgc gttcgaattt ttcaccggtg
     3241 gacatgaaag taatgctatc attgcgacac ttttccggcc cctccccaaa gtagaaggat
     3301 caatgctccg tatagtgcca gggaaatctg gaacggttaa gctatcgcag tttctagcgc
     3361 gcccgcgcga cctcctgttg aacgcgctgg aggcgcggaa actgctgccc atcgccttcc
     3421 tgatgatgct gggcttcctc attctgctgg cttggaacgg gtacaccacc accagcgagc
     3481 tcctgagctc gcaggcttac gttcagcgca cacatcaggt gttgcatgag atggatggcg
     3541 tggaagacag catccaggat gcccgcgagg catggctgca ctacatcctc acgccggaac
     3601 cgcaggatgt ggtgagcttc gaagatgccc aggtgcgcac gtggaccggg ctcgaccaca
     3661 tgctcaacct cgatccggag catcaagccg ctgttcgtaa tattcaggat ctggtgcgcg
     3721 a
//
LOCUS       DASQYP010000384         2381 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_249420, whole genome shotgun sequence.
ACCESSION   DASQYP010000384 DASQYP010000000
VERSION     DASQYP010000384.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 2381)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2381)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2381
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_249420"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            170..610
                     /locus_tag="VE783_12540"
     CDS             170..610
                     /locus_tag="VE783_12540"
                     /inference="COORDINATES: protein motif:HMM:NF024834.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HYX54275.1"
                     /translation="MKPFRPNEYVLLFLALLIAVIVAAGTSWNQPAQASQNTQLIRSL
                     QGPDLYRAHCAPCHGLNGKGDGPVAPALIGELPDLTTIAQRNGGKYPAERMERVIAGQ
                     EETAAHGSRDMPVWGPIFHQVEEDRDYGAVRLHNLTEYIRSIQK"
     gene            649..1638
                     /locus_tag="VE783_12545"
     CDS             649..1638
                     /locus_tag="VE783_12545"
                     /inference="COORDINATES: protein motif:HMM:NF005292.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine/serine dehydratase"
                     /protein_id="HYX54276.1"
                     /translation="MPIQESSARATTFALDSWRRDIHAAHARISPFVTRTPVEDMTSI
                     APPGVRLLFKMENLQETGSFKLRGATNKILSLTREQASTGVIAASNGNHGMGVAAAAE
                     RIGIDAEVYVSNHVSTAKAKKIEKLGGRLHLAGNDPLAAELAARSAAEASGKVFISPY
                     NDYEVIAGQGTIAVELCEQVPQMDAVFIAAGGGGLISGVGAYLKAVSPKTEVVGCWPV
                     NSPVMYESMRAGKILEVPEQPTLSESTAGGLESGSVTLEICRKVIDSSVLVSEDEILA
                     AMRKVRDARGWLIEGAAGVALAAFFKTTEHYRGKTVVIVICGANLSPEVENRI"
     gene            complement(1652..>2381)
                     /locus_tag="VE783_12550"
     CDS             complement(1652..>2381)
                     /locus_tag="VE783_12550"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX54277.1"
                     /translation="GMGRAAGLELPEGWHDHPMSGVQDFLDRLERALSLPALNRLARV
                     QWLKEAYEVLPIGDKDEGKGTRIWTSVLAWSAVEALGCLVDPKNRETAAARVFDGLRL
                     RQPLAEALGAQGHEGDEKWRAAARVRASFAHAARLSAPFSWVHDPDVSWAMGVHEFEG
                     TAYVVKEYFERLLCWMVFRGLLDIAEEPEPDLEKFALLAEEIENRSASLARGGYRVEA
                     LEDAETLNVLRETEEKKPEKVEPR"
BASE COUNT          503 a          720 c          669 g          489 t
ORIGIN      
        1 aaatgaggca ttgcaggcgc tgaaaaacga cggcgtgcga ggggccgcag tcatacaatt
       61 ttgagccctt cagcagtcct cctttcgtca cggctgtccg gtgacccgca tcactttcct
      121 tcttcttccc gtcagagatg atgaacttga ggtcggaggt ctggaaaaaa tgaagccgtt
      181 tcgaccgaac gaatacgtct tgctctttct cgctcttctt atcgccgtga ttgtcgctgc
      241 agggacctct tggaaccagc cggcacaggc aagccagaac acacagctca tccggtccct
      301 gcaaggccca gacctgtacc gggcccactg tgcgccgtgc cacggcctaa acggcaaagg
      361 cgatgggccg gttgctcctg cactcattgg agaacttcct gatctgacca ccattgcgca
      421 gcgcaacggc gggaagtatc cggcggagcg tatggaaaga gtcatcgccg gccaggaaga
      481 aactgcagcc cacggctcgc gtgacatgcc ggtatggggc ccgatttttc atcaggtcga
      541 ggaagatcga gactatggcg cggtccgcct gcataacctg accgaataca tccgttccat
      601 ccagaagtag gtttgatgga gcgctgagca tgctggcaca atagagctgt gcctatccag
      661 gaatcatcgg ctcgggctac tacatttgcg cttgactcat ggcggagaga cattcatgcg
      721 gcgcacgcgc gcatcagccc attcgtcacc agaactcccg tagaagacat gacttccata
      781 gctccacccg gagtgcgtct gctgtttaag atggagaact tgcaggagac aggctccttc
      841 aagctccgcg gcgcaacgaa caagattctg tcgctcactc gggagcaggc gagtacgggt
      901 gtaatcgcag cttcaaatgg caatcatggg atgggagtgg ccgcggcggc ggaaaggatc
      961 gggatcgacg ctgaagttta tgtctccaat catgtctcta ccgcgaaggc aaagaagatc
     1021 gagaagctgg gggggcggct gcacttggcc ggcaacgatc cgctcgcagc cgagttagcc
     1081 gctcgctccg ccgcagaagc ttcaggtaaa gtcttcattt ctccttacaa cgactatgaa
     1141 gtgatcgccg gccagggcac catcgcggtg gaactctgcg agcaagtacc ccagatggac
     1201 gcagtgttca ttgcagctgg gggaggcggc ttgatttcag gagttggggc ttatctgaag
     1261 gctgtttcac ctaaaacgga agtagtaggc tgctggccag tgaactcgcc ggtgatgtat
     1321 gaatcgatgc gcgcggggaa aatccttgaa gtcccagaac agcctacgct ctctgaaagc
     1381 accgctggcg gactcgagtc cggttcggtg acgctcgaga tctgtcgcaa ggttatcgat
     1441 tcttccgttc ttgtcagcga agacgaaatc cttgccgcaa tgcggaaagt gcgcgatgcc
     1501 agaggctggc tgattgaagg cgccgccggc gtggctctgg cggcattttt caagactacc
     1561 gaacattacc ggggcaagac tgtggtgatc gtcatctgcg gcgcgaatct ttcccctgag
     1621 gtggagaaca ggatctaaga gcgctcgcga tttaacgtgg ctcgaccttt tccggtttct
     1681 tttcttccgt ctcacgcagc acgttcagcg tttctgcgtc ttcaagcgcc tccactcgat
     1741 atccgccgcg ggccaggctg gctgaccggt tctcaatctc ctccgccaac aatgcgaact
     1801 tctccaagtc cggctccggt tcctcggcga tgtccagcag accgcggaaa accatccagc
     1861 aaagcagccg ctcaaaatat tccttgacca cgtatgcggt gccttcaaat tcatgcactc
     1921 ccatggccca ggaaacgtca ggatcatgta cccaactgaa gggagcgctc aggcgcgcag
     1981 catgagcgaa tgaggcacgc acgcgcgcgg ccgcgcgcca cttctcgtct ccttcgtgac
     2041 cctgtgcgcc cagcgcttcg gcgagcggtt gacgcaagcg caggccatca aagacccgcg
     2101 ctgctgccgt ctcccggttc ttcggatcca caaggcaacc cagtgcttcc accgccgacc
     2161 acgccaacac actggtccag atccgcgtcc ccttgccttc atccttatcg ccaattggca
     2221 gcacctcata tgcctctttc agccattgca cgcgcgccag tcgattcagc gcgggcaaac
     2281 tcagggctct ctccagacgg tccaggaagt cctgcactcc ggacatcgga tgatcgtgcc
     2341 agccctccgg cagttccagt ccggcagcac gtcccatgcc g
//
LOCUS       DASQYP010000385        10076 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_315945, whole genome shotgun sequence.
ACCESSION   DASQYP010000385 DASQYP010000000
VERSION     DASQYP010000385.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 10076)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10076)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10076
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_315945"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(106..1197)
                     /gene="trpD"
                     /locus_tag="VE783_12555"
     CDS             complement(106..1197)
                     /gene="trpD"
                     /locus_tag="VE783_12555"
                     /EC_number="2.4.2.18"
                     /inference="COORDINATES: protein motif:HMM:TIGR01245.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004048 - anthranilate
                     phosphoribosyltransferase activity [Evidence IEA];
                     GO_process: GO:0000162 - tryptophan biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="anthranilate phosphoribosyltransferase"
                     /protein_id="HYX54278.1"
                     /translation="MTSPVKLMLTAMVVAAIHKIAHHHLSLSREEARTVMGEILAGRA
                     SDPQIAALLVALHMKGETVDEIVGFAEAIRAVATPIASGNGTALDVSGTDREALVDTC
                     GTGGDASDTFNISTVTALTIAGAGVRVAKHGNRGITSKCGSADVMEALGVNITIPPAR
                     IADCLNEVGIAFMFAPAMHTATKYVQPARRELRPMRSVFNLLGPLTNPAKASAQVVGV
                     YSEDLVEKLATALKMLGLKRALVVHGENGLDEISISGPTKIGEVRGEWVRVYEITPDQ
                     FGLQSAPISAISGGDVNANADIIWKILEGEKSPRRDVVLMNAAAALVAAGRADSLKEA
                     MPIAVESIDSGAAKAKLAALIEFTNRRYL"
     gene            complement(1331..2314)
                     /locus_tag="VE783_12560"
     CDS             complement(1331..2314)
                     /locus_tag="VE783_12560"
                     /inference="COORDINATES: protein motif:HMM:NF021778.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-propeller fold lactonase family protein"
                     /protein_id="HYX54279.1"
                     /translation="MRFRCCILASLCLGLLAIPALAADPHPLLLVLNKPQAKLVIVDP
                     QTRKAIGEVPTGTGPHELAVSADGKLAFVANYGDQTPGDSLSVIDIENRRELRRVNLG
                     ALRRPHGIVQSNGKIYFTAEVNKVVVRYDPAVDRVEWLMGTGQDLTHMLAISKDEKKI
                     FTANIMSDSVAVLEPRPQGQHWRVTVIPVGKGPEAIDLSPDGNEVWTAHSGDGGVSVI
                     DTGTEKVVATIPGLTKHSNRLKFTPDGKQVLISDPESNQVLVMDVAGRKLVQRITVPA
                     QPLGIQMSPDGKSAYVACAGAGQVAVIDLARLAQVATIDVGPGPDGMAWVH"
     gene            complement(2380..3219)
                     /locus_tag="VE783_12565"
     CDS             complement(2380..3219)
                     /locus_tag="VE783_12565"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX54280.1"
                     /translation="MRAILSFFLASLFVSVTWSQAPNTAAPAPSQSDEQMLQRTVEAT
                     VQWQNSSTPPASASVQLLKKGLVKGKTMFDYRVKVTGAPQDKLYRLMVWPVTAPNPIT
                     MMDGLKISGDGTVACPADSTKSCAQRFKGNELHLTYVPAPGEIYRQALISEDRAARVF
                     FSVVPEPIVGQDKKCSLEVLRLSPGFELVAILGRGFQPSEAIKFHTQSYGEAHDADVS
                     ADSKGEFHASLTPFVAGHAFGGTAVSASGAGCAPHVSFNWGTKPAGAKPAAAAKKTPA
                     KKK"
     gene            3322..5340
                     /locus_tag="VE783_12570"
     CDS             3322..5340
                     /locus_tag="VE783_12570"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012546.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S9 family peptidase"
                     /protein_id="HYX54281.1"
                     /translation="MHILRGRTARLGFALVSAVFVIQPASSQSSSAVQPAASAAKTTT
                     EKSRLNDVIQTLFSVKTFSQTAISPDGAQLAWVENVGGGRSAIYMAKAAEGSVPRRIS
                     ALSGGATRSEDSPAWSPDGKRLAFLSDAVKPGQPQLYVVNIAGGSPHRLTDIQGLLAS
                     PGWSPDGNKIALLWTENAERAAGPLVAETPRTGVIKEAVSEQRLAVIDGGGGKLEAIS
                     PEGMYVYEYDWSPDSRRFVTTAANGNGDNNWYVAQIYTLDASGGPMKSIHKPALQIAN
                     PVWSADGKSIAFISGLMSDEVSVGGDVFIVPAQGGEARNVTPAIKASATWLRWMPDSQ
                     RLVFGEDVDGDSGIATVNVSNGEISTVWRGPEQISQVSIAADGVHSAMLSESFSKPVE
                     VWTGALGAWHQVTKVNSELRPEWGEAKSVHWNNDDFILQGWLLYPHGFDPAKKYPMVV
                     QVHGGPGAMAHSSWPGSHTYAAALSAAGYFVFFPNPRGSFGGGEAFTRANVKDFGYGD
                     FRDILAGVDSVVHSAPIDAQHVGIAGWSYGGYMTMWAVTQTNRFAAAFAGAGIANFQS
                     YYGENQIDEWMIPFFGASVYDDPQVYARSSPITFIKKAKTPTLVIVGDSDGECPTPQS
                     FEFWHALKTLDVKTEFVVYEHEGHSFVNPKHQRDVIERVVSWFDTYLR"
     gene            5421..5789
                     /locus_tag="VE783_12575"
     CDS             5421..5789
                     /locus_tag="VE783_12575"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HYX54282.1"
                     /translation="MSRIHSKISILVIEQDATVRYLRALALRLEGYTVATAEHLADAR
                     QKLAEKQFNLVILDVGHFAEPGLAFCEEVKDNYPHTKLLMQGEDRIFPIKSSCPDTTV
                     PKQEGPLQLVREVQRLLQSA"
     gene            complement(5924..6703)
                     /locus_tag="VE783_12580"
     CDS             complement(5924..6703)
                     /locus_tag="VE783_12580"
                     /EC_number="2.1.1.100"
                     /EC_number="2.1.1.334"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isoprenylcysteine carboxylmethyltransferase
                     family protein"
                     /protein_id="HYX54283.1"
                     /translation="MKRIFGFAFGIICYAVFLFVFLRAVWFVWTMDGLAAQAPLTSAL
                     LINAALLGAFAVQHSGMARQSFKRAWTKIVPPLLERSTYVLMASLVLLSVVEFWQPLP
                     GTIWSVRNPAAVVLLNVLFWFGWALLFTCTLLIDHFDLFGLKQSWKYLRNEKYEPPVF
                     RTPGPYRLVRHPLYLGFLIAFWSAPHMTSGRLFFAVMCTGYILVAIQLEERDLVTFHG
                     ESYRVYRSGVSMIVPLPGKQANAAQSKANLMPETQQSIRSK"
     gene            complement(6700..6849)
                     /locus_tag="VE783_12585"
     CDS             complement(6700..6849)
                     /locus_tag="VE783_12585"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX54284.1"
                     /translation="MSTELRNLLHVIQQACSCPVFLVLVGDFKLPLTRPGGWFVDPPA
                     EELVK"
     gene            complement(6860..7441)
                     /locus_tag="VE783_12590"
     CDS             complement(6860..7441)
                     /locus_tag="VE783_12590"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX54285.1"
                     /translation="MKIATLVKLFHISMLAILVIGITPVVLAQSGQSSSDSNNDDLAS
                     AQGMVKAVREATAKFQDVNAAKPDYQLTFGCVTGPDAGAMGLHYVNFKILGKGILDPA
                     QPTILIYEPQPDGTQKLIGADFLVFKDQWDAAHNNSGAPQLMGQLFQEFDAPNRFGLP
                     SFYTLHVWAWKPNPNGAFVNWHPHVSCQSFTAP"
     gene            7724..9475
                     /locus_tag="VE783_12595"
     CDS             7724..9475
                     /locus_tag="VE783_12595"
                     /inference="COORDINATES: protein motif:HMM:NF012698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix domain-containing
                     protein"
                     /protein_id="HYX54286.1"
                     /translation="MLRRDGQPVPLPPKDVEVLIVLVERAGHIVEKDELLEKVWPGVF
                     IEEGNLSRRVFNLRQVLGDGEDGQKYIETVPRRGYRFIATVQKKEEAGAAPISTLGAD
                     AIAMASAPARLSNPPTPAARRLWFWPLALTAVLAVTATLSSQHFLRLRTAGSQKVMLA
                     VLPFANLSGEPNTDYFADGFTEEMITQLGQVQPAKLGVIARTSAMQYKNTKASAAKIC
                     QELGVNYMLEGSVRQAGDRVRITAQLIQGSDQTHLWAESYDAPLTDVLRVQQEIAGKI
                     TNSLRMELLASQSNRGASAPLNPEAYRKYLLGLNELHTGTREGLDNAIQHFQEAIAAE
                     PGNGRYYAVLAEAYASSVPYFSAPSVAMPLAKQAAEKALQLDPTLAIAHSTLGDARLL
                     YDWDWNSAKEEYSRALAINPSSSEAHLGYATYFSTLGRVDDAIAEVQQVYRVDPIAVD
                     SRQETIWVYLYSGSMEQTAAQARKTIELEPKAGYAHGLLALAYANMGRHQDAVEEAET
                     ADRVSEDTPGAIAVAISALARVGEREKAHRLLNHALDLAQKRYICRFLLAAAYVDLDE
                     KDKAIESLQRGIRDRST"
     gene            complement(9573..>10076)
                     /locus_tag="VE783_12600"
     CDS             complement(9573..>10076)
                     /locus_tag="VE783_12600"
                     /inference="COORDINATES: protein motif:HMM:NF012546.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prolyl oligopeptidase family serine peptidase"
                     /protein_id="HYX54287.1"
                     /translation="AKAAIDKAVEMGVTDRNRVGVGGHSYGAFMTANLLAHSDLFRAG
                     VARSGAYNRTLTPFGFQSERRTIWEAPEMYIKVSPFMQADKIKRPILLIHGMADDNSG
                     TFPIQSERMYQAIKGNGGIVRYVQLPYEAHGYLARESTEHTLWEMVSWFDKWVKNAAP
                     ETRTATK"
BASE COUNT         2157 a         2853 c         3007 g         2059 t
ORIGIN      
        1 agagccgatt cggtcagctc agcaaagcgt ttatcgagca aattgtcgct gctcatcact
       61 gtgcactact tctttatttt caggcaatct cgtttagatg agtcttcaca aatatctgcg
      121 attggtaaac tcgatcagcg cagccagctt ggccttcgct gcgcctgaat cgattgactc
      181 cacagcgatt ggcatcgctt ccttgagtga gtcggcccgt cccgcggcca ccagcgccgc
      241 cgcggcgttc atcagcacca catcgcgacg cggcgacttc tcgccttcca ggattttcca
      301 gatgatatcc gcgttagcat ttacatctcc gccggaaatc gcgctgatgg gtgcggactg
      361 aagcccgaac tggtccgggg tgatttcgta cacgcgcacc cattcaccgc gcacctcgcc
      421 gatcttggtt ggtccgctga ttgaaatttc gtcaaggccg ttctcgccat ggaccaccag
      481 cgcgcgtttc aggccaagca tcttgagcgc cgtcgccagc ttttccacca gatcttctga
      541 atagacgccc accacttgcg ccgaagcttt ggccggattc gtcagcgggc caagcaggtt
      601 gaaaacgctg cgcatgggac gcaattcgcg ccgggccggt tgcacatact tggtcgccgt
      661 gtgcatggcc ggcgcaaaca tgaaagcaat gcctacttca ttcaggcagt cggcaatgcg
      721 ggcaggaggg atggtgatgt tcacgccaag tgcttccata acgtcagccg agccgcactt
      781 ggaagtgatg ccacggttgc catgcttggc gacgcgcacg cccgcgccgg cgatcgtcaa
      841 agcggttacg gtcgaaatgt taaaggtatc actggcgtcg ccgcctgtgc cgcaggtatc
      901 cacaagcgct tcgcggtcgg tgccgctcac gtccagggcg gtgccgttgc cgctggcgat
      961 gggcgttgcc accgcgcgga tcgcctcagc aaagccgacg atctcgtcaa cggtctcgcc
     1021 cttcatgtgc agcgcaacca gcagcgccgc gatctgcggg tcactggccc ttcccgccag
     1081 gatttctccc atgacggtgc gcgcctcttc ccggctcagc gagaggtgat gatgggcgat
     1141 cttgtgtatg gcggcaacga ccatggcagt gagcattagc ttaacaggtg aggtcaagaa
     1201 aatcgcctgc ggagcttcaa ccgttccgag caatccatga tgatcggcta aacggagcac
     1261 gaagactctg agttaactgc acgtggaggg atttcaggcg tgggcgtcat caacgtgaca
     1321 accgaactct ctagtgaacc cacgccatgc cgtccgggcc tggacctaca tctatggttg
     1381 caacctgagc gagccgggca agatcaatca cagccacctg tcccgcacct gcgcaggcaa
     1441 cgtaggcgct ctttccgtcg ggagacatct ggattccgag cggttgcgct ggaaccgtga
     1501 tgcgctgcac cagcttgcga cctgccacat ccattaccag aacctggttt gattcgggat
     1561 cagagataag gacctgcttg ccatccgggg tgaatttgag tcggttggaa tgtttggtca
     1621 atccaggaat ggtggcgaca actttttcag tgccggtgtc gatgacgctg accccgccat
     1681 cgccggagtg tgccgtccag acctcgttgc cgtcgggcga gaggtcgatg gcttcaggac
     1741 ccttgcccac gggtatcacc gtcacacgcc agtgctgacc ctgagggcga ggctcaagca
     1801 ctgcaactga atcggacatg atgttcgcgg tgaagatctt tttctcatct ttgctgatgg
     1861 ccagcatatg ggtgaggtcc tggcctgttc ccatgagcca ttccacgcga tcgacggcgg
     1921 gatcgtagcg caccaccacc ttatttacct cggcggtgaa gtaaattttg ccgttgctct
     1981 gcacgatgcc atgcggccgc cgtagcgcgc caagattgac gcgccgcagt tcccttcgat
     2041 tctcgatatc gatcactgac aagctgtcgc ccggcgtctg gtctccatag ttcgcgacga
     2101 aggcaagctt tccgtcggca gagactgcga gctcatgagg gccggtcccg gtcggcactt
     2161 caccaattgc cttgcgagtc tgcggatcga caatcaccag tttggcctgt ggcttgttca
     2221 gtaccagcag cagtggatgg ggatcggcgg cgagcgccgg aatggcaagc agacccaaac
     2281 acaagctggc aagaatgcag caacgaaagc gcatggaggc tcctgacgga aagtcgataa
     2341 gaatcaaatg cgagttagac gaacaccgcg cccggccgtt tatttctttt ttgccggtgt
     2401 cttctttgcc gcggctgccg gctttgcgcc ggccggtttg gtgccccagt tgaacgagac
     2461 atgcggcgca cagcctgctc ctgaggcgct cacggcagtt ccgccgaagg catgtccggc
     2521 gacaaatggt gtgaggctgg cgtgaaactc gcctttcgaa tcggcggaaa catctgcatc
     2581 gtgcgcttcc ccgtaagact gggtgtggaa ctttattgcc tcactgggct ggaagcctct
     2641 gcccaatata gccacgagtt caaaaccagg actcaggcgc aagacctcaa ggctgcactt
     2701 cttgtcctgc cccacaatgg gctctggaac cacggagaag aaaactctgg cagcgcgatc
     2761 ttccgaaatc aaggcctgac ggtagatttc tccgggggcc ggcacgtagg tcaggtgcag
     2821 ttcgttgcct ttaaaacgtt gcgcgcagct cttcgtcgag tccgcggggc aggccacggt
     2881 accatcgccg gagatcttga ggccatccat catggtgatt ggattcggcg cggttaccgg
     2941 ccagaccatc agtcgataga gcttgtcctg gggcgcgcca gtgactttca cgcggtagtc
     3001 gaacatcgtt ttccccttga ccaaaccctt ttttaagagc tgcacagagg cgctggccgg
     3061 cggagtactc gagttctgcc attgcacggt ggcttccact gtgcgctgca acatctgctc
     3121 gtcagattgt gaaggcgccg gagcagcagt gttcggggct tgagaccacg tcacggaaac
     3181 aaagagactc gccagaaaga aagacaggat tgcgcgcata agcgctgaga atatcacatc
     3241 tgggcatccc tcctgattct tgcccagcta cggagtgcgg cgtatatttg cgctgaaccg
     3301 taaccagggg gagaagtgtt catgcacatt ctgcggggcc gcacagcaag gctcgggttc
     3361 gctttggtga gcgcagtgtt cgtcattcag ccagcttctt cgcagagctc ttctgctgtg
     3421 cagccggcag cttctgcggc aaagacgacg acagagaagt cccgcctcaa cgatgtgatt
     3481 cagaccctgt tttctgtgaa gacgttcagc cagacggcca tctcacccga tggtgcgcag
     3541 ttggcctggg tggagaacgt gggcggcggc aggtctgcga tttacatggc caaggcggcg
     3601 gaaggctcag tgccgcgccg catctcggca ctttcgggcg gcgccacacg cagcgaagac
     3661 tcacccgctt ggtcacccga cggcaaacgg ctcgcatttc tttccgatgc ggtcaagccc
     3721 ggacagccgc agctctacgt ggtgaatatc gctggaggct cgccgcatcg gcttaccgat
     3781 atacagggat tgcttgcttc acccggctgg tcaccggacg gcaataaaat cgcgctgcta
     3841 tggaccgaaa acgcggagcg cgctgccgga ccgcttgtgg cggagactcc gcgcaccggc
     3901 gtaatcaaag aggcggtatc agaacagagg ctggccgtga tcgacggtgg cggtggaaag
     3961 ctggaggcga tttcgccgga aggcatgtac gtttacgaat acgactggtc gccggacagc
     4021 aggcgctttg taaccactgc ggcgaacggt aatggcgaca ataactggta cgtcgcgcag
     4081 atttacaccc tcgacgcgag cggcggcccg atgaaatcca tccacaagcc cgcgttgcag
     4141 atcgcgaatc ctgtgtggtc ggctgatgga aagtcgattg catttatttc tggcctgatg
     4201 agtgacgagg tctctgtagg aggtgacgtc tttattgttc ctgcgcaagg cggcgaggca
     4261 cgcaacgtta ctccggcaat aaaagcctca gccacgtggc tacgctggat gcctgatagc
     4321 caacggcttg tgtttggtga agatgtggac ggcgatagcg gcattgccac ggtgaacgtg
     4381 agcaacgggg aaatttccac cgtgtggcgg ggcccggaac agatttcgca ggtatccata
     4441 gcggcggatg gagttcacag tgccatgctc tctgagtcgt tcagcaaacc cgttgaagta
     4501 tggaccggag cgttgggcgc atggcatcag gtgaccaaag taaactctga gctcaggccg
     4561 gaatggggag aagcgaagag cgtccactgg aacaacgatg atttcattct ccagggatgg
     4621 ctgctctacc cgcacggctt cgatccggca aagaaatatc ccatggtagt gcaggtgcat
     4681 ggcggcccgg gtgcaatggc gcattccagc tggccgggct cacataccta cgcggcagcg
     4741 ctttccgcgg ctggatattt tgtgttcttt cccaacccac gcggcagctt tgggggaggt
     4801 gaagccttca cccgcgcaaa cgtgaaagat tttggttatg gagattttcg cgacatactg
     4861 gccggagtgg attccgtggt gcatagcgcc cctatagatg cgcaacacgt gggaattgcc
     4921 ggatggagtt atggcgggta catgacaatg tgggcggtca cgcagaccaa ccgctttgcg
     4981 gccgcgttcg cgggagcagg cattgcaaac ttccagagct actacgggga gaaccagatc
     5041 gacgaatgga tgattccgtt tttcggcgcc tccgtgtatg acgacccgca ggtctacgcg
     5101 cgcagctcgc cgatcacgtt catcaagaaa gcgaagacgc cgacgctggt gattgttggc
     5161 gatagtgacg gggagtgtcc cacgccgcag tcgttcgagt tctggcacgc gctcaagacg
     5221 ctagacgtga agacagagtt cgtagtctac gagcatgaag ggcattcctt cgtcaatccg
     5281 aaacatcagc gcgacgtgat tgagcgcgtg gtgagctggt ttgacaccta cctgaggtaa
     5341 gttcgcggcg ctgaactaag gcagattagg gcggtcgggt aatagacctg cagctcacac
     5401 ttcgctacgc tgggcatggt atgtcccgca ttcattcaaa gatctcaatt ctggttattg
     5461 agcaggacgc gacggttcgt tatcttcgcg cgctggcgct gcgattggaa ggctacacgg
     5521 ttgccacggc agagcatctg gctgacgcgc ggcaaaagct ggcagagaag cagttcaacc
     5581 tggtgattct cgacgtcggt catttcgccg aaccgggtct tgcattctgc gaagaggtga
     5641 aagacaacta tcctcacacg aagctgctga tgcagggcga agacaggatt ttccccatca
     5701 aaagcagttg cccggacaca accgttccca agcaggaagg accgctgcaa ttggtgaggg
     5761 aagtacagag gctgttgcag tcggcgtgat catgataacc gctcgacatt tccaaaaagc
     5821 tcgcgcgcaa agactaatct gcgcgcgaga tagagtggca acggacgaac atcgagtttc
     5881 caccaggcgc gacccgcagt cgcgccggca ttccagactt ttcttacttt gacctgatgc
     5941 tctgctgcgt ttcaggcatc agatttgcct tagattgagc ggcattggct tgtttcccag
     6001 gcaacgggac gatcattgag acaccgctgc ggtaaacgcg gtaggactcg ccgtggaagg
     6061 taacgaggtc gcgctcttcc aactggatcg ccaccaggat gtaaccggtg cacatcaccg
     6121 caaagaagag ccggccactg gtcatgtgcg gcgcgctcca aaaggcaatc agaaatccga
     6181 gataaagagg atgacgcacc agccggtacg gcccgggagt gcggaacacc ggcggttcat
     6241 atttctcatt gcgcagatac ttccacgact gtttcaggcc gaaaagatcg aaatggtcaa
     6301 tcagtagcgt gcaggtaaac agaagcgccc atccgaacca gaacagtacg ttgagcagaa
     6361 caactgcagc gggattgcgc actgaccaga ttgtgcccgg cagcggctgc cagaattcca
     6421 ctacactgag aagaaccagg ctggccatca gtacataggt actgcgctcc agcaatggag
     6481 ggacgatctt ggtccatgcg cgtttaaagc tctgccgcgc cattccgctg tgctgtacgg
     6541 cgaaagctcc caacagcgcc gcattgatca gcaaggcgct ggtgagcggc gcctgagcgg
     6601 caaggccatc catggtccag acgaaccata cggcgcgcaa aaagacgaac aggaacactg
     6661 cgtaacagat gatcccgaaa gcaaaaccga aaatacgttt catttgacaa gctcctccgc
     6721 aggcggatcg acaaaccagc cccccggcct ggtgagtggc agcttgaaat cacccaccag
     6781 aaccaggaac acggggcatg aacatgcctg ctgtatgacg tgcaacaggt ttctgagttc
     6841 agtgctcatc cgctttctcc tacggcgcgg tgaacgactg gcaggaaacg tgaggatgcc
     6901 aattcacgaa agcgccgttc ggattcggct tccaggccca gacgtggagt gtgtagaacg
     6961 aaggcaggcc aaagcgattc ggggcatcga actcctggaa aagctgcccc atcaactgag
     7021 gggctcccga gttgttgtgg gccgcatccc attgatcctt gaatacgagg aaatcggcgc
     7081 cgatcagctt ctgcgtgcca tcgggctgcg gctcataaat gaggatggtg ggttgcgcag
     7141 gatcgaggat tccctttccc aggatcttga aattgacgta gtgaagtccc atggcgccgg
     7201 catccggacc ggtgacgcat ccgaaggtga gttgataatc aggcttggcc gcatttacat
     7261 cctggaactt ggcggtagcc tcacggacgg ctttcaccat tccctgtgcg gaggcaaggt
     7321 catcgttgtt ggagtcactg gatgactggc ctgactgggc cagaactacc ggagtaattc
     7381 caatgaccag aatggccagc atcgagatgt ggaaaagctt gacgagtgtt gcgatcttca
     7441 tggcaaatcc tttcgcgagg agcgtgaaat atctggtcag tggcgaccgg tcgcactcct
     7501 aaagctggct ccccgtgagg tacaatcgac cccccgaagg cttcaggaaa tgcgagtccg
     7561 gcgccatgac cgcttactgc ttgcgacaag gtgccaaacc gggatctgaa atgtctttga
     7621 gggattgtga aagagttctt gtgaagttct tcaggcgggt aatcttctga cagaaaagca
     7681 tttctacgat ttcagtcctt atcggctgga ccccgaagaa cgcgtgctgc gacgcgatgg
     7741 gcagcccgtg ccgctgccgc ccaaggacgt ggaagtgctg attgtgctgg tggaacgggc
     7801 cggccacatt gtggaaaaag acgagctact ggaaaaggta tggcccggag tcttcataga
     7861 agaagggaac ctttcccgcc gggttttcaa cctgcggcag gtgcttgggg acggcgagga
     7921 cggccagaag tatattgaga cagtcccgcg gcgcgggtac cgctttattg cgacggtcca
     7981 gaaaaaggaa gaagcaggag cggctccaat ttccaccttg ggagcggatg cgatcgcaat
     8041 ggcatccgca ccggcgcggc tttcaaaccc gccaactccc gctgccaggc gactctggtt
     8101 ttggccgctt gcgttgaccg cggttctcgc cgtgactgcg acgttgtctt cccagcactt
     8161 cctcagactt cggactgcag gttcgcaaaa agtgatgctt gcggtgcttc ctttcgcaaa
     8221 cctgagcggc gagccgaaca ctgattactt tgccgacggc ttcaccgaag aaatgatcac
     8281 ccagttggga caggtgcagc cggcgaagct cggcgtcatc gcacgaacat ccgccatgca
     8341 gtacaagaac acgaaggcga gcgccgccaa aatatgccag gagctgggcg tgaattacat
     8401 gctggaaggc agcgtgcgcc aggcgggtga tcgagtgcgc atcacggccc agctgatcca
     8461 aggttctgac cagacccacc tatgggcgga aagctatgat gccccgctga cggacgtctt
     8521 gcgcgtgcaa caggagatcg ccggcaagat caccaactcg cttcgcatgg aactgctggc
     8581 ctctcagtcc aatcgtggcg caagtgctcc gctgaatcct gaagcgtacc ggaaatatct
     8641 tttggggctg aatgagttgc acactgggac ccgtgaggga ttggataacg ccattcagca
     8701 tttccaggag gcgatcgccg ccgagcctgg aaacggacgc tactatgcag ttctcgccga
     8761 ggcgtacgct tcctctgttc catatttcag cgcgccctcg gtggccatgc cgctggcgaa
     8821 gcaggcggcg gaaaaggcgc tgcaactcga tcccactctg gccatcgctc attccactct
     8881 gggcgatgct cgtctgcttt acgactggga ctggaactct gccaaagagg agtacagccg
     8941 ggccctggcc atcaatccca gttcctcaga agcccatctg ggatatgcga cgtatttcag
     9001 cactctggga cgggttgacg acgcgattgc tgaggtgcag caggtttatc gtgtcgatcc
     9061 catagcagtc gacagccgcc aggaaacaat ctgggtttac ctttattccg ggagcatgga
     9121 acagaccgcg gcgcaggcga ggaagaccat tgagcttgag ccaaaagccg gctacgcgca
     9181 tggccttctc gcgctggcct acgccaacat gggacggcac caggatgccg tggaggaggc
     9241 ggaaaccgct gatcgagtga gcgaagacac tccaggagcg attgcagttg cgatctctgc
     9301 cctcgcccgc gtgggcgagc gggagaaggc ccaccggctc ctcaaccatg ctcttgatct
     9361 ggcgcagaag cgctacatat gccgcttcct gctcgcggcc gcgtacgtgg atctcgacga
     9421 aaaagacaaa gccattgaat ctctgcagcg aggcattcgc gaccggtcca cttgaatgcc
     9481 ctggatcggg gtggaacccc gaatgaatcc gctacgcagc gatccgcgct tccaggagat
     9541 cgtgcgccag tccaactatc cgcacagcta acttacttcg tcgccgtcct ggtttccgga
     9601 gcggcgttct tcacccattt atcgaaccag ctgaccattt cccataacgt gtgttcggtc
     9661 gattcacgcg ccagatagcc gtgcgcttca tagggaagct gcacataacg aacgatcccg
     9721 ccatttccct tgatcgcctg gtacatgcgc tcgctctgga tggggaaagt acctgagttg
     9781 tcgtctgcca tgccgtggat cagcaggatc gggcgtttga tcttgtccgc ctgcatgaag
     9841 ggcgagacct tgatatacat ctccggcgct tcccagatgg tgcggcgctc gctctggaag
     9901 ccgaagggcg tgagcgtgcg gttgtaagcg ccgctgcgcg caacgccagc acggaacagg
     9961 tcggaatgcg cgagcaggtt ggcggtcatg aaggcgccgt aactgtgccc gccgacgccg
    10021 acgcggttcc ggtcggtgac gcccatctcg acggccttgt cgatggccgc cttcgc
//
LOCUS       DASQYP010000386        11254 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_295640, whole genome shotgun sequence.
ACCESSION   DASQYP010000386 DASQYP010000000
VERSION     DASQYP010000386.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 11254)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11254)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11254
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_295640"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..729
                     /locus_tag="VE783_12605"
     CDS             <1..729
                     /locus_tag="VE783_12605"
                     /inference="COORDINATES: protein motif:HMM:NF024045.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase"
                     /protein_id="HYX54288.1"
                     /translation="AYGRIVHEGFTLAIVGRPNVGKSSLFNRLVERERAIVTAVPGTT
                     RDLVTETVALGGIPVKLIDTAGIRQSSDEAESIGIRKSYEALAEADMVLLVLDAAQGM
                     TAEDRELLEACTGRHTLVVANKADLAPECSGQAAGPRTFRTSALTGSGIPELRQEILS
                     QLSGHYGGEQETGFLTNVRHQRLVDESIMSLQQGRRAVQQKIPHEMIMLDLYGALRPL
                     DAITGETTTDDILNLIFSSFCIGK"
     gene            complement(898..1527)
                     /locus_tag="VE783_12610"
     CDS             complement(898..1527)
                     /locus_tag="VE783_12610"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX54289.1"
                     /translation="MNSRRLATLSIALFLCAASHSADKKKLVQSYKLNPDQVAELTDV
                     KLITAQQNCENWAVAAGLAMMLRAQNVNLGQSFWVTRLSGGEVCSPNLPSVDAIAKEV
                     NREFVLDDGRHVRVELNFTPGAPSQIDTIIAGLQRQQVSMLLWRGHAWYLSGLLYDEY
                     IGLDGGRMFQVKELRLANTFARQPGAAFVRGRDDASEIGGVLSVGVTVL"
     gene            complement(1613..2194)
                     /gene="ruvA"
                     /locus_tag="VE783_12615"
     CDS             complement(1613..2194)
                     /gene="ruvA"
                     /locus_tag="VE783_12615"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: protein motif:HMM:TIGR00084.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009379 - Holliday junction helicase
                     complex [Evidence IEA];
                     GO_function: GO:0009378 - four-way junction helicase
                     activity [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction branch migration protein RuvA"
                     /protein_id="HYX54290.1"
                     /translation="MIAHIRGRLLSKHPNEAIIEAAGVGYAVHISIPTFSDLPQLGAE
                     VAMFIHTHVREDALALFGFLRPEEKQLFEKLISVSGIGPKLAITILSGMSAEAMVGAI
                     KGNNVAALTRIPGIGKKTAERMVLELRDKLDAFGAPAAAAAASPVEEDVLSALVNLGY
                     QRALAEKALARLGNTSAESFDTLFRKTLAALAK"
     gene            complement(2332..3072)
                     /locus_tag="VE783_12620"
     CDS             complement(2332..3072)
                     /locus_tag="VE783_12620"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX54291.1"
                     /translation="MNQAAQAEMRTAQDIIRQVRVNQSPNGICYTTAGEVTLPSADLE
                     HMVEAIPRSIAAALDRKAYYFVPLAIGDGDTTLVAEHFDPSLSDRALCHRNIDSGDAQ
                     CVFISTRLLEDRFSIAFEFFINVGHAFVDRAGISPEFGELVWEQATHNIRGETSFDAF
                     EFRKQALLAGRVDEKAKSDYLSAAFSDSIAIYLLSLYMDIDYYDLREREYPLLAPPAL
                     ADRLKKVAQLFPPNAGFQFNILYKRRGS"
     gene            3476..5191
                     /locus_tag="VE783_12625"
     CDS             3476..5191
                     /locus_tag="VE783_12625"
                     /inference="COORDINATES: protein motif:HMM:NF016289.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /protein_id="HYX54292.1"
                     /translation="MQRNLVRLFVLCLTLAGAIAGQEKADLDAISKIRYEGFRNSKIM
                     DTASGLMNGIGARLTGSPNAKAANEWTAAKLTEFGLVNSHIESWSPFGKGWTNDFTSV
                     RMVAPDNAPLIAYAKAWTPGTNGAVKGSVVQVMIRTPQEMARYKGKLAGKIVLFGEAT
                     PMKVSDKPLSERYDQKKLEEIENYEIPGDRNDPRFREFVRRARFQRTLNKFFDDEKVL
                     AIIDRSRGDIGGGTVFVQSGGSYKEGQTAGTPQLTMAQEHWDRISHILTLKKDVELEL
                     NVKNTFSEAPTQWNTIAEIPGTDKKDELVMLGAHLDSWHTGTGATDNGAGSVVMMEAV
                     RIIKALGLKPRRTIRIGLWTGEEQGLLGSQWYVAQHFGTRPESKDPDRKGDPTVIRRE
                     AGPMTIKPEQAKVSAYFNVDNGTGKIRGVYMQENAQVEPIFEAWMKPFTDLGMTTLSM
                     RNTGGTDHLSFDAVGIPGFQFIQDPIEYDTRTHHSNMDVYDRLQPDDLKQAAVIVASF
                     VYMAAMRDQMFPRKPVEKELPPMPLDDEENTNPPPGVAPTGQPSANPSAQPSPTPAPN
                     RPPRR"
     gene            complement(5192..6172)
                     /locus_tag="VE783_12630"
     CDS             complement(5192..6172)
                     /locus_tag="VE783_12630"
                     /inference="COORDINATES: protein motif:HMM:NF006094.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine/serine dehydratase"
                     /protein_id="HYX54293.1"
                     /translation="MPENSSRSGAASQQGRTIDRASIAEIYHQIQPYVRRTPVIDVAP
                     ADFGVSCATLSFKLELLQHTGSFKTRGAVTNLLLRPVPAAGVVAASGGNHGAAVAYAA
                     KTFGVPARIFVPSVSSPAKIERIRSYGADLVVGGERYADALAASEAWAEKSGAMPVHA
                     YDQPETLLGAGTVGLELGEQLAGLDTLFVAVGGGGLLGGIAAWYERRINLIGVEPETA
                     PTLTRALEAGKPVDAPAGGIAADSLAPRRVGELMFPLAQKWVSKVQLVPDQAIVNAQQ
                     KLWEVLRVVTEPGGAAAFAPLLSGLYRPAAGERVGVLLCGANTTAVNFSG"
     gene            complement(6237..6977)
                     /locus_tag="VE783_12635"
     CDS             complement(6237..6977)
                     /locus_tag="VE783_12635"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF005559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HYX54294.1"
                     /translation="MRLAGKTAIVTGGGSGIGKAIAAAFVREGAKVAVCGRHRERLDA
                     AAAQLGANCLPIVADVADDSALSHLISSTVQRFGSLHILVNNAGVLLPGTAESLTEEQ
                     WQETFSVNVRAVWQLSRSALPHMRAAGGGSIINIGSVLSSLGARNRVAYAASKGAVLA
                     MTRAMALDHAAENIRINCISPGIVETELVAAFNQDEAARRQRIAMHPMGRFGQPNDIA
                     GLAVFLASDESGWITGADYTVDGGYSAH"
     gene            complement(7025..8452)
                     /locus_tag="VE783_12640"
     CDS             complement(7025..8452)
                     /locus_tag="VE783_12640"
                     /inference="COORDINATES: protein motif:HMM:NF017390.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M56 family metallopeptidase"
                     /protein_id="HYX54295.1"
                     /translation="MEFSYLGFAGDGLSWFLRVGAGFVLCLAMVRLLKRPHYRFLTWL
                     WFLVLSSLYWGALVINRIFGIAPKSGPAHLPHSPIHFAYASHIAVPLSWAAAFQRGVS
                     PLVGGYLGIVLLLLGAKTWKHWKLNRLVKRGRPACAELENLLGSLCHEVGIRNCRALV
                     LPGISSPATAYWRSPRILLPEVCERTESHPEVLTTLYHEITHIRRRDYLWSNVSDVLC
                     ALLFFHPAVWQARKSMRRERELACDEAVVTAQPDHRADYATTLARFVRFRMLQRQASF
                     GVDLAAGHSFLGTRIRFILADPVRTPRWRSASSWAGVLAFVAVFGGICPSLSLIFDIA
                     QLHAADAQPPSATQAPRTATFAKHKSAHTLHSVAATSESGTAAVVYPDTLTTLRVHPK
                     VADDSSFAFESSANSSSGTYEVERQALHDSSGYPGYSRPTLASVVLGTAGGIGASRSE
                     HTPAAPSPAPVPAPPARHGHTGPTR"
     gene            complement(8477..8884)
                     /locus_tag="VE783_12645"
     CDS             complement(8477..8884)
                     /locus_tag="VE783_12645"
                     /inference="COORDINATES: protein motif:HMM:NF015898.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0045892 - negative regulation of
                     DNA-templated transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="BlaI/MecI/CopY family transcriptional regulator"
                     /protein_id="HYX54296.1"
                     /translation="MDVVQPSTVLPTRAENKILQVLWELGQGTVDEVINHPSQNPKPN
                     YKTTQTILRIMEEKGLVRHMSRGRVFVFEPCVTREQVGRLSVQTLLQQNFGGSPTELL
                     VNLLEAGPVKETELEELEALIRKHRTQKAENSK"
     gene            complement(9353..9787)
                     /locus_tag="VE783_12650"
     CDS             complement(9353..9787)
                     /locus_tag="VE783_12650"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX54297.1"
                     /translation="MKILRWILVLCGLALFAYSFTLPAVREASAAPGKAGFEGYKCAS
                     IALVNTWGSEGLKLMHNEPADFFSLLISGWINLIFPLVLIFTLIRPHGAASSVLCLLV
                     VLMFAACWVFFLRHHLNALVGYYAWMGGVILALGAARFRPQS"
     gene            complement(9874..10311)
                     /locus_tag="VE783_12655"
     CDS             complement(9874..10311)
                     /locus_tag="VE783_12655"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX54298.1"
                     /translation="MIQGNEVRNRCSDMDFENYNQGSFTVGIEGGRLGTILDLGSPWE
                     LAQRYGYAETVDKGQGFASLRFESGKMVVLKSSRPPEVQPLREASALFQEGRSNASAP
                     VALGHIYLVRITDRFDKGAQSIVKFSVIAYAPKQFVTIRWSRL"
     gene            10755..>11254
                     /locus_tag="VE783_12660"
     CDS             10755..>11254
                     /locus_tag="VE783_12660"
                     /inference="COORDINATES: protein motif:HMM:NF014839.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TGS domain-containing protein"
                     /protein_id="HYX54299.1"
                     /translation="MSQTAQTSTITVTLPDGSKKEVPRGTTPLDIANLISPRLAEAAL
                     VAKIKQSAVSTQHSASNPSGEPGAQQSTNAADGAKAPASMHAQQSKDGWQFADLSKPL
                     ESDVELQLLTEKNSEALEVFRHSSAHVLATAVLELFPETKLGHGPATDSGFFYDFYRD
                     KPFTPE"
BASE COUNT         2491 a         3192 c         3392 g         2179 t
ORIGIN      
        1 gcttatggcc ggatcgtgca tgaagggttc acgctggcaa tcgtgggccg gccaaatgtg
       61 gggaaatcaa gtctttttaa ccggctggtg gagcgtgagc gcgcgatcgt aacggctgtc
      121 ccaggcacta cgcgtgatct agtgactgag acagttgccc tgggcgggat tcctgtgaag
      181 ctgattgata cagcgggaat tcgtcaatcc agcgacgagg ctgagagtat cgggattcgc
      241 aaatcgtatg aagcgctggc tgaggcagat atggtgctgc tggtgctgga tgccgcgcag
      301 ggtatgacgg ctgaagatcg tgagctgctg gaggcctgca ccggaaggca cacgctggtg
      361 gtcgcaaaca aggctgatct tgcgcctgag tgcagcggcc aagcagcggg tccgcgaaca
      421 tttcgcacat cggccctcac gggctccggc atcccggagc tgcggcagga aattctctct
      481 caactttccg gtcattacgg aggcgagcag gaaacgggct ttctcaccaa tgttcgccat
      541 caacggcttg tggatgaaag catcatgtca ctgcagcagg gacgccgcgc cgtgcaacag
      601 aagatcccgc acgagatgat catgctggat ctctatggag cgctgcgtcc gctggacgcc
      661 atcaccggcg agaccacgac ggacgacatc cttaatttga tcttcagcag tttctgtatt
      721 ggaaaatgaa gaagctgacg gccaagcaaa ggcagagaat cctagggtca atagcggcca
      781 ttcccgacga tgaaattgac acctcagaca tcccggagct gacgaagcag caaatgaagc
      841 taggcgtgcg aggtcaaatg tatcgcgggg atgtgaagct ttcgaaagag aagcgcgtta
      901 aagcaccgtc accccgacgc tgagcacccc gccaatttca ctcgcatcgt ccctaccgcg
      961 gacgaacgcc gctccgggct gacgggcaaa ggtgttggcc aggcgcagtt ctttcacttg
     1021 aaacatccgg ccgccatcca ggccgatgta ttcgtcgtag agcaggccgg agagatacca
     1081 ggcgtggcct cgccagagga gcatggagac ctgctggcgc tgaaggccgg cgatgatggt
     1141 atcgatctgg ctgggagcgc ccggagtgaa gttcaactcc acacgaacgt ggcgtccgtc
     1201 atcgagcacg aattcccgat tgacctcttt ggcgattgca tcgacagaag gcaggttagg
     1261 tgagcaaacc tcgccgccgc tgagccgggt gacccagaaa ctctggccaa ggttcacgtt
     1321 ctgggcccgg agcatcattg caagtccagc agccacggcc cagttctcgc agttctgttg
     1381 cgcggtgatc agcttgacgt cagtcagttc ggcgacctgg tccgggttga gcttgtagct
     1441 ctgtacgagc ttcttcttgt ccgcagaatg gctggctgcg cagagaaaca gtgcgattga
     1501 gagggtggcc agccggcgtg agttcatgga tgaaagttta gcgccaaaat agggtgacgg
     1561 gactagaggt tttcccggag gtctttactt agctaagtcg actatcctga ggctactttg
     1621 ccagtgctgc cagggttttg cggaagagag tgtcaaatga ttcggctgag gtgtttccca
     1681 gccgggcgag ggctttttct gccaacgcac gctgataacc caggttgacg agcgcagaca
     1741 acacgtcttc ttccaccggc gaagcggcgg ctgcagcggc gggggcgcca aaggcgtcga
     1801 gcttgtctcg gagttccagc accatgcgtt ccgcagtctt tttgccgatg ccgggaatgc
     1861 gtgtcaacgc ggctacattg ttccccttga tcgctcccac catggcttcc gcggacatgc
     1921 cgctcaagat ggtaatggcc agctttggcc caatgccgct tacgctgatg agtttttcga
     1981 aaagctgctt ttcttcggga cgcaaaaagc cgaacaatgc cagggcgtct tcccggacgt
     2041 gggtgtggat gaacatggcc acttcagcac cgagctgcgg caggtcagag aacgtgggga
     2101 tgctgatgtg gacggcatag ccgacgcccg cggcctcgat gatggcctcg ttggggtgtt
     2161 tcgagagcag ccttccacga atgtgtgcaa tcattggttt tggccgcttc gcggcaaacc
     2221 gctcaagagc atcgcggaac cgaagtgcac tgaacgctcc tgtaacagcg cagctcggcg
     2281 agcgatcggc ctcgctgctt gatcccgggt cgcaactgtc cgctgcttat attagcttcc
     2341 tctgcgcttg tagaggatat tgaactgaaa acccgcattc ggcggaaaga gctgggcgac
     2401 ttttttcagg cgatcagcca gtgcaggcgg cgccagcagg ggatactcgc gctcgcgcag
     2461 atcgtaatag tcaatgtcca tgtacagcga gagcagatag attgcaatgc tgtcagagaa
     2521 ggcagcactc aggtaatcgg acttagcctt ttcgtcgacg cggccggcaa ggagcgcctg
     2581 tttgcggaac tcgaaggcat caaagctggt ctcgccgcgg atattgtggg tggcctgctc
     2641 ccagaccagt tcaccgaact ccgggctgat gccggcacgg tccacaaacg cgtgccccac
     2701 gttgataaaa aactcgaaag caatggagaa gcggtcttcc agcagccggg tggagatgaa
     2761 gacgcactgg gcgtcgccag aatcgatatt gcgatggcag agggcccgat cagagagtga
     2821 aggatcaaaa tgctctgcca ccaacgtggt gtcgccgtct cctattgcga gaggcacaaa
     2881 gtaatacgcc ttgcggtcga gcgcggcggc gatggaccgg ggaatggctt ccaccatgtg
     2941 ctccagatcg gccgaaggca gggtgacctc gcccgcagtg gtgtaacaga ttccgttggg
     3001 cgactggttg acccgaacct gccggatgat gtcttgcgcc gttcgcattt ccgcctgagc
     3061 agcctgattc acgttatcat tctaacgtaa cccaatactg cacttacggt agattgatgc
     3121 gtaaactctt actcagcgcc gggataggcc tggtttcggg cgtcctgtgc ttcttccttt
     3181 ccgtagcttt tctaagcatc ctccttctga tcatcggggc tgtcacgcac cgccctcagg
     3241 atatgacgtt gagttataag gttgcggtcc cagtggccct gctggcggcg atttgcgggt
     3301 tctttattac cctgtttcgt tcgatccggg cggcattcag ggagaaacag ccagggagct
     3361 gagctaaaac tgagctgcac aaatctttac aatccccggt ttgacccgct ccagccagcc
     3421 atttagactt gcctgcccac cagcgcgtgc attcaaggag cagtgaatga atcatatgca
     3481 gcggaatctt gtccgcctct tcgtattgtg tctaaccctg gcaggagcca ttgccggcca
     3541 ggaaaaagcc gatctcgacg ccatcagcaa gattcgctat gaaggcttcc gcaattccaa
     3601 aatcatggat accgccagcg gccttatgaa cggtattggc gcgcggctta cggggtcacc
     3661 gaacgccaaa gcggccaacg agtggaccgc ggctaagctc accgaatttg ggcttgtgaa
     3721 ctcgcacatt gagtcgtggt cgccctttgg caagggctgg actaacgatt tcaccagcgt
     3781 ccgcatggtc gctccggaca atgcgccgct tatcgcctac gccaaagcct ggactccggg
     3841 cacgaacggc gcggtaaaag gcagcgtggt gcaggtaatg atccgcacac cgcaggagat
     3901 ggcgcgctac aaagggaagc ttgcgggcaa gattgtcctg ttcggtgaag ctactccgat
     3961 gaaggtttca gacaagccgc tttccgagcg ttacgaccag aagaagctcg aggaaataga
     4021 aaattatgag attcccggcg accgcaatga tccccggttc cgcgagtttg tgcgccgcgc
     4081 acgctttcag cgcacactga acaagttctt cgatgatgaa aaggtactcg ccatcatcga
     4141 ccgcagccgt ggtgatattg gcggcggtac agtgtttgtg cagtcaggcg gctcttataa
     4201 ggaaggccag actgccggca ctccgcagct caccatggct caggagcact gggaccggat
     4261 ttcacacatc ctgacgctaa agaaggatgt ggaactggaa ctaaacgtca agaacacgtt
     4321 ttctgaggca ccaacgcagt ggaacaccat cgcggaaatt cccggcaccg acaagaaaga
     4381 tgaactagtc atgctgggcg cgcaccttga ttcctggcac acaggcactg gcgctacgga
     4441 caacggcgct ggttcggtgg tgatgatgga agctgtacgc atcatcaagg ctcttggcct
     4501 gaagccacgc cgcaccatac gcattgggct ttggaccggc gaagaacagg gactgctcgg
     4561 gtcacagtgg tacgtggcgc agcacttcgg cacccggccg gaatcaaagg acccagatcg
     4621 caaaggtgac cctacggtga ttcgtcgtga agccgggccg atgacgatca agccggagca
     4681 ggccaaggtc tcagcgtatt tcaacgtaga caacggcaca ggaaaaattc gcggcgttta
     4741 catgcaggag aatgcgcagg ttgagccgat ttttgaggcc tggatgaagc cgttcaccga
     4801 ccttgggatg acgacgctct ccatgcgcaa caccggcggt accgaccatc tttcgttcga
     4861 tgcagtggga attccgggat tccagttcat tcaggaccca atcgagtacg acacgcgcac
     4921 gcaccactcc aacatggacg tttatgaccg gcttcagccc gacgatctaa aacaggcggc
     4981 cgtgatcgtg gcatcgttcg tttacatggc tgcgatgcgc gaccagatgt tcccgcgcaa
     5041 gccggtggag aaagagctgc caccaatgcc gctggacgac gaggagaaca cgaatccgcc
     5101 gccgggagtt gcgcccacag gccagccgag cgcgaatccg tcggcgcagc caagccccac
     5161 gccggctcca aatcgtccgc cgcggaggta atcagccgga gaagttgacc gcagtggtgt
     5221 tcgcgccgca cagcagcacg ccgacgcgtt cacccgctgc gggacgatac agacctgaga
     5281 gcagcggcgc aaaggccgct gcgcctccgg gttcggtgac caccctcaat acttcccaga
     5341 gtttctgctg agcgttaaca atcgcctgat ccggaacgag ttggactttg cttacccact
     5401 tctgcgccag cggaaacatc agctcgccga cgcgccgggg cgccagtgaa tcggctgcga
     5461 tcccgccagc tggggcgtct accggtttac cagcttcgag cgcccgcgtg agagtgggag
     5521 ctgtctcggg ctccacgccg atcaggttga tgcgtcgctc ataccaggcg gcgatccctc
     5581 ccagcagccc tcctccgccc acggcgacga agagcgtatc gaggccggct agttgttcac
     5641 ccagttcgag tccaactgtt ccggccccca gcagcgtttc tggttgatcg taggcgtgga
     5701 caggcatggc tcctgatttt tcggcccagg cttcgctcgc ggccagagca tcggcatatc
     5761 gctcaccgcc aaccaccaga tcggcgccgt aactgcggat gcgctcgatc ttagcgggcg
     5821 aagagacgct gggaacgaag atgcgcgcag gcactccgaa cgttttcgct gcataagcca
     5881 ccgcggcgcc atgattgccg cccgaagccg cgacaactcc tgcggccgga accggacgca
     5941 gcagcagatt cgtgactgcg ccgcgagttt tgaatgagcc ggtgtgctgc agcaactcaa
     6001 gcttgaaact cagggtcgcg caggaaacgc cgaaatcagc aggggcaacg tcgattaccg
     6061 gggtgcgccg gacgtagggc tgaatttgat gatagatctc ggcgatgctg gcgcgatcaa
     6121 tggttcggcc ctgctggctg gcagcgccac tgcgggatga gttttcaggc atgttggggg
     6181 aatccgggct attcgtgttg cttcgattat aaatagccgg gctataaaca gccgggtcag
     6241 tgggccgagt agccgccgtc aacggtgtag tcggcgccgg tgatccagcc ggattcgtca
     6301 ctggcgagaa agacggcgag gccggcaatg tcattgggct gtccgaagcg gcccatgggg
     6361 tgcatggcga tgcgctggcg gcgagcagct tcgtcctgat tgaaggcggc cacaagctcg
     6421 gtctccacaa tacccggcga gatgcagttg atgcggatgt tttccgcggc gtgatcgaga
     6481 gccatggcgc gcgtcatggc caacacggcg cctttagagg cagcataagc cactcggttg
     6541 cgcgctccaa gcgaactcag caccgatcct atgttgatga ttgagccgcc gcctgccgcg
     6601 cgcatgtgcg gcagagcaga acgcgagagc tgccagacgg cgcgcacgtt tacgctgaag
     6661 gtttcctgcc attgctcttc cgtgagtgat tcggcggttc caggaagcag cacgcctgca
     6721 ttgttgacca ggatgtgaag ggacccgaag cgctgaactg tagagctgat gaggtgggag
     6781 agcgcagaat cgtcggcaac gtctgcaacg ataggaagac agttcgcccc gagctgcgca
     6841 gcagcggcat cgagccgctc gcggtggcgt ccgcaaaccg ccacttttgc tccttcgcga
     6901 acgaaagctg cggcaatggc tttcccaatg ccgctaccgc cgccggtcac aatggccgtt
     6961 tttcccgcga gacgcatgcc cgggattgta attgaatgac gacgcgagct tgggatttgg
     7021 agagctagcg ggtcgggccg gtgtggccgt gacgcgcagg cggagccgga accggggctg
     7081 gggacggagc ggctggagtg tgttcgctgc gcgaggcgcc aatcccgccg gcagtaccca
     7141 gaacaacgct ggcaagcgtt ggacggctgt agccggggta gccggaggaa tcgtgcaaag
     7201 cctggcgttc cacctcgtaa gtgccggatg agctgttagc cgaagattcg aacgcgaagc
     7261 tcgagtcatc agcaaccttg ggatgaacac gaagcgttgt cagagtgtca ggatagacaa
     7321 ctgcggcagt tcccgactcc gacgtagccg ccacactgtg cagcgtgtgc gccgatttgt
     7381 gcttcgcgaa tgttgccgta cgcggggctt gcgttgccga tggcggctgc gcatcggcgg
     7441 cgtggagctg cgcgatgtca aaaatcagcg agagtgaagg gcagatgccc ccgaagacgg
     7501 ccacaaaagc gagtacaccg gcccatgaag atgcgctgcg ccagcgaggc gtgcgcaccg
     7561 gatcagccag gatgaaacgg atgcgggtgc cgaggaaaga atgcccggcg gcgaggtcca
     7621 ccccgaacga ggcctgccgt tgaagcatgc ggaaacgcac gaagcgcgcc agtgtggtgg
     7681 cgtaatccgc gcgatggtcc ggctgcgcgg tgacgaccgc ttcatcgcag gcgagttcgc
     7741 gctcgcggcg catactcttg cgcgcctgcc aaacggccgg atggaagaag agcagggcgc
     7801 agagcacgtc actcacgttg gaccagagat aatcgcgacg gcgaatgtgc gtgatttcgt
     7861 gatagagcgt ggtcagcact tccgggtgag actcagtgcg ctcgcagact tccggcagca
     7921 ggatgcgcgg actgcgccag taagccgtag cgggagagct gatgcccggg agcacaagtg
     7981 cgcggcaatt gcggattcca acttcgtggc agagactgcc taacaaattt tccagttcag
     8041 cacaggcggg gcggccgcgc ttgaccaggc ggttgagctt ccagtgcttc caggtttttg
     8101 cgcccagcag cagcagcacg atgccgaggt aacctccaac cagaggcgat acgccgcgct
     8161 gaaaagcggc ggcccaggaa aggggcacgg cgatatgact tgcgtaagcg aaatggatgg
     8221 gtgaatgggg taagtgcgcc ggtccggatt tcggtgcaat gccgaagatc ctgttgatta
     8281 ccagcgcacc ccaatacagt gacgagagca ccaaaaacca cagccaagtc aggaatctgt
     8341 agtggggccg tttcagcagg cgaaccatgg cgagacaaag cacaaatccc gcgccgactc
     8401 ttaaaaacca ggagagtcca tcaccggcga aaccgagata cgagaattcc ataaccaact
     8461 gccagaaacg cggaacttac ttcgagtttt ccgctttctg cgtacgatgc ttccgtataa
     8521 gagcttccag ctcttccagt tctgtttcct tgaccgggcc cgcttccagc aggttcacca
     8581 gcagctccgt gggggaaccg ccgaaattct gctgcaacag ggtttgtacg gaaagacgac
     8641 ccacctgctc gcgcgtgacg cagggctcaa agacaaacac gcgaccacga ctcatgtgac
     8701 gaaccaggcc tttttcttcc atgatccgca gaatcgtctg cgtggtcttg taattcggct
     8761 ttggattctg gctggggtgg ttgatgactt catcgaccgt gccctgacca agttcccaaa
     8821 gcacctgcag gattttgttt tctgcccgcg taggtaacac ggtgctgggc tgaacaacgt
     8881 ccatttactt ctcctgtaag gtgaaaatag agtctagacg gatttgacta ttctgaccta
     8941 attcggagat tgactcaacc ggtaaactac tgatctacaa agtcttaaat acctcagact
     9001 catcgatcac cggcagttca aaaaggcggt agctgaaccc ttcagggcgg tctggcaggg
     9061 cgcgaagcag gcggaagacc actgagtcag aacatttggc gcaacgggga aagcgctcat
     9121 ccttgaggat gaggacctca tgggggaggc gatgatgcgc gtgggtgact cggtaaacgc
     9181 ccgtcgcggg gacaagatct ccagtcttat gagccacttc agtgtcgatg tgccgacttg
     9241 cgagtggctc caatctcaaa atagtggatc tccgccccat ctgatttctg atgcattctg
     9301 gtgcgcagga gtgagaaaaa aattgcgaac tgctggtcag cagctctgct gatcagctct
     9361 gcggcctaaa cctggcggcg ccaagcgcca gaatgactcc ccccatccaa gcgtaatacc
     9421 ctaccagggc gtttaagtgg tggcggagaa aaaaaaccca gcacgcagcg aacatgagca
     9481 ccacaagcag gcagagcacg ctggaagcgg cgccgtgagg ccgaatcagc gtgaaaatca
     9541 gcacgagcgg gaaaatcaag ttgatccatc cgctgatcag gagagagaag aagtcggcgg
     9601 gctcgttatg catgagcttc aggccctctg atccccaggt gttgaccagg gcaatagagg
     9661 cgcacttata gccttcgaat cctgctttcc ccggggcggc agaggcttca cgcaccgcgg
     9721 gaagagtaaa gctgtaagcg aagagggcca gaccgcacag gacgagaatc caccgcagta
     9781 tcttcaattg cagagctcca ggattgcggg gttgattgta gccgcctgcc acggcgccgc
     9841 gcaccatgga aatcaaccag aatcgtccgc atactagagc ctgctccaac gaatagttac
     9901 gaactgcttt ggcgcgtacg cgatcacaga aaacttgacg atgctctgcg cacctttatc
     9961 aaaccggtca gtgatccgca cgagatagat atggccgagc gcgaccggcg ccgatgcgtt
    10021 actcctacct tcctggaata aggccgaagc ctctctgaga ggctgcacct caggcgggcg
    10081 tgagcttttt aacaccacca ttttcccgct ctcaaagcgc aacgaggcaa acccctgccc
    10141 cttgtcgacc gtctctgcat agccgtatcg ctgggccaac tcccaagggc taccgaggtc
    10201 gaggatggtg cccaggcgac cgccttcaat gccaacggtg aagctgccct ggttatagtt
    10261 ttcgaagtcc atgtcactgc agcggttgcg gacttcattg ccctggatca catggcctcc
    10321 acttccgtct gcgaaacaca agctttgagt aaggggatcc aatgcgtaca aggttgcaac
    10381 tccaccggcc ccgtcgctcg gattggtgtt gggctgagcc gctaattcgc gttgcgccat
    10441 tgcaaatcaa attgggaaga gcacaaatgt ggcaacgatt aatgcaaact tgatcccttt
    10501 catttcagat ttcctttctc tttcggtccg gcgttggagg gaacgcgtct ggcgggcgaa
    10561 cccaaaccca aaaaaatgct acttcttaga caccaattta cagacgccgg tccagggccg
    10621 gccagagtta ggaccagccg ctcacgctac gcgatcgatc cggcaagaaa gtgccggtgg
    10681 agtgcaggcc cggaacttgt tagactcgaa tgttgacggg cgccgcctcc cttagcggtc
    10741 ccagactctt ccttatgtcg caaaccgctc aaaccagcac cattacggtc acgctgcccg
    10801 atggcagcaa aaaagaagtg cctcgcggaa ccacgccgct ggatattgcc aacttaatca
    10861 gtccacggct ggccgaagca gctctcgtcg cgaagatcaa gcaatcagca gtcagcactc
    10921 agcattcagc cagcaacccg agtggtgaac ccggagcgca gcagagcacg aatgccgctg
    10981 acggggccaa ggctcccgcc agcatgcacg cgcagcaatc gaaagatggc tggcaatttg
    11041 ctgacctgag caaaccgctg gagagcgatg ttgagctaca actgctgacc gagaaaaatt
    11101 cggaggcgct ggaggttttt cgacactctt cagcccacgt gctggcgacc gccgtgctcg
    11161 agctcttccc tgagaccaag ctgggacacg gccccgcaac agattccgga ttcttctacg
    11221 acttctatcg cgacaaaccc ttcacgcccg aaga
//
LOCUS       DASQYP010000387         5456 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_142959, whole genome shotgun sequence.
ACCESSION   DASQYP010000387 DASQYP010000000
VERSION     DASQYP010000387.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 5456)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5456)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5456
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_142959"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..371)
                     /locus_tag="VE783_12665"
     CDS             complement(<1..371)
                     /locus_tag="VE783_12665"
                     /inference="COORDINATES: protein motif:HMM:NF014759.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX54300.1"
                     /translation="MEVFLVDGTYELFRHYYALPSMRDNQGREIAAVRGVLTSLRGMA
                     KQGATHIAVATDHGVESFRNDMWPGYKTSEGVEPDLLAQFPILEETLAEAGFKVWPMV
                     EFEADDALASVAVTAARNRRV"
     gene            500..1099
                     /locus_tag="VE783_12670"
     CDS             500..1099
                     /locus_tag="VE783_12670"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor"
                     /protein_id="HYX54301.1"
                     /translation="MQEGDMAGQAILGERILKQAGTSEAKADREVEALVAEHAGMVFR
                     IAYSILRNHQDAEDAAQDSFLRALKFQRRAGAVRNPKTWMARIAWTTALDWRRQRSPA
                     WMEALDDGEAARVAAPLISADDHLAGREMQQILARLIAGLPEDLRQPLELSTVQELNS
                     AEISEVMGIPEGSVRTRLLRARQLLKEKMAKLVEARQNG"
     gene            1092..1670
                     /locus_tag="VE783_12675"
     CDS             1092..1670
                     /locus_tag="VE783_12675"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX54302.1"
                     /translation="MADEKKNQLDSILDEMLANYSAVEPRPGFEQRLVTVLSESESRP
                     RWFETLGLRWAIASAAAVILVVALYLFWPATSRTPQQTRKTVQPSAPGIEQPPTRSSS
                     EAATADHSVPKHPVVHHSRPVMANASVPKLETFPAHAPLTDEERLLLSYMARTPRQEL
                     IAQSRPDVPLAPELQEGFPAAPQNFNTQRNSR"
     gene            1680..2240
                     /locus_tag="VE783_12680"
     CDS             1680..2240
                     /locus_tag="VE783_12680"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX54303.1"
                     /translation="MKRVFQIAVLLLLPLALYGQDSPKEARKPDAPQPIPSTRPQPQR
                     TAYRVDFKLFEVEDGKRTNQREFSMIASAQDYDPPYATLRVGNRVPVNTGEKGNYIDI
                     GFEGRCRLTDMNGKLSAAVSVEITGLAPSEEGGGTHGTTMPVLRSTRLNIDSVLVPGK
                     PQIIGGIDDLASKKRMQVEVTATRID"
     gene            2365..3957
                     /locus_tag="VE783_12685"
     CDS             2365..3957
                     /locus_tag="VE783_12685"
                     /inference="COORDINATES: protein motif:HMM:NF025341.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartyl protease family protein"
                     /protein_id="HYX54304.1"
                     /translation="MAKLRLTAALLLTAGLLFPKISVAQSVAVAAPPAAASEKISPTP
                     DKLTAARALFQQGRFKEAVAVLAPAEQINPTADAYALEVRSLLKLDDVTAAESKSQHA
                     VELFPRSAIVLAARGDALFRRGLMADAEDQYRAALKLNDSCERAWLGMGRIYSAASRR
                     KDSKDAYTRAHELDPTDGDAYYYWALGLQYPQNVTELEKHLAGFPDDAERERHEREYI
                     DFLKALRGRKVWVPVKQPEHAELKLQAVLSDSVPRPRSPLSGAQSVLPPADSRLRGFS
                     LQVRLNDKANASVMLDTGASGLTISRKLAEKAGAIRLSEHSLEGVGNAGPAKGYEAWL
                     DKVTVGEFEFHDCHVHVSPQENADYDGLIGTDLFDDFLVTVDFPGRKLHLEPLPKAPE
                     QPPTSAPANFTQIYRFAHIMLIPTTVGKSARGLFVLDTGAFTNSISPQLAQQVTTVRK
                     SDVYVKGVSGSVANVFSADEATLHFSRFSQPNESMATFDVNGLSKDLGTEVSGFIGFA
                     TLRKMQMIINYRDGLVNFDYRQ"
     gene            4091..>5456
                     /locus_tag="VE783_12690"
     CDS             4091..>5456
                     /locus_tag="VE783_12690"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX54305.1"
                     /translation="MKKPLTIAALIVLAASLVTAQDSDNKNNDNRFHFRPNTLVLSRS
                     VYAGNSGTVSVGQVLPPGCVARTVTLPLLAGGTTTVKVKCATAVADGTYPTVFNNDGP
                     DGSFGITSPIFLDNIRTNGERLGTLPVPSELIVTSFSSKSELALNRSTDGKSITFVGY
                     HGGPGFVTGPNQLDVSNSNTPGVVDPTNPVSTQYFRSVAEVDANGHVQVTDGNAYSGN
                     NGRAAIKGNGLFYLAGNDNNGGLSSAQLTTTQVGMNLITSTGAELLVPGQVPPLPPDI
                     AKLGEFAITQVGYKAPDKAGKDNNFRGITIFNNTLFVTKGSGGNGINTVYQVGNAGML
                     PSGNAADLAKLPLTILPGFPTSLASGVDQNGKAAPVSFPFGIFFADAHTLYVCDEGDG
                     TLVTPPVNGNVATADSQARAGLQKWGFENGSWHLLYTLQDGLNIGVPYSVLNYPAELS
                     PATGG"
BASE COUNT         1180 a         1609 c         1575 g         1092 t
ORIGIN      
        1 tcgacgcgcc ggttgcgggc ggcggtgacg gcgacggatg ccagcgcgtc atcggcttca
       61 aactccacca tcggccaaac cttaaagccc gcttccgcca gcgtctcttc cagtatcggg
      121 aattgcgcca gcaggtcggg ttcaacacct tcacttgtct tataaccggg ccacatgtcg
      181 ttgcgaaatg attcgacccc atgatcggtc gccacggcga tgtgcgtcgc gccctgcttc
      241 gccatgccgc gcaaggatgt gagcacgccc cggacggcgg caatctcgcg gccctggttg
      301 tcgcgcattg agggcagggc gtagtaatgc cggaagagct cgtaggtgcc gtcaaccagg
      361 aaaacttcca caaaatcctc aacttcaaga taaataggct atgatcgccg atcaaactga
      421 cggtgtgacg tcattttcag tcccaggcaa ttttctttcg aaaatttctg aacacttccc
      481 gttctgctga tgtctttcta tgcaggaagg cgatatggcc ggacaggcaa ttctgggaga
      541 gcggatcctg aagcaggctg gcacgagcga ggcgaaggca gacagggaag tggaagccct
      601 ggtcgctgaa catgccggca tggtgttccg catcgcctat tccatcctgc gcaatcacca
      661 ggacgcggaa gatgccgcgc aggactcttt cctgcgcgcg ctcaaatttc agcgcagggc
      721 gggggctgta aggaacccga agacctggat ggcacggatt gcctggacca cggcgctgga
      781 ttggcgccgc cagcgttctc cggcgtggat ggaagcgctc gatgatggcg aggccgcccg
      841 ggtcgcagca ccgctcattt cggctgacga tcacctcgcc ggacgggaga tgcagcagat
      901 tctggcgcgg ctgattgccg gattgccgga agatttgcgg cagccgcttg aactgtccac
      961 ggttcaggaa ctgaactcag ccgagatcag cgaagtgatg ggcatcccgg aaggctcggt
     1021 gcggacacgt ttactgcgtg cacgacaact gctgaaggag aagatggcaa agctggtgga
     1081 ggccagacaa aatggctgac gaaaagaaaa atcaactcga ctccatcctg gatgaaatgc
     1141 tcgccaacta ctccgccgtg gagccgcgcc cgggatttga gcagcgcctg gtgactgttt
     1201 tgagcgagtc tgaatcgagg ccgcgctggt ttgagacgct cggcttacgg tgggcgatcg
     1261 cttcagccgc agcggtgatt ttggtagtcg cactttatct gttctggccc gccacatcgc
     1321 gaaccccgca gcagacgaga aagacagtgc agccctcagc accgggcata gagcagccgc
     1381 caactcggag ctcgtcggaa gccgcaactg ctgatcattc ggtgccgaag catccggttg
     1441 tgcatcattc ccggccagtc atggcaaacg catctgtacc gaagctggag acattcccgg
     1501 cgcatgctcc gcttaccgat gaagagcgcc tgttgctgag ctacatggcg cgcacgccca
     1561 ggcaggagct gatcgcgcag agccgccccg atgtgccgct cgcacctgag ctacaagagg
     1621 gttttcctgc tgcaccgcag aatttcaata cacagagaaa tagcagatag gagagaggta
     1681 tgaaacgcgt ctttcaaatt gcagtcttgt tgttgttgcc gctggcgctt tacggccagg
     1741 attcgccgaa ggaggcccgc aaaccggatg cgccgcagcc catcccgtcg acgaggccgc
     1801 agccgcagcg caccgcctac cgcgtagact tcaagttgtt cgaagtggaa gatggtaagc
     1861 gcaccaacca gcgggaattt tcgatgattg cttccgcgca ggactatgac ccgccctacg
     1921 ccacccttcg agtaggcaac cgcgtgcccg tgaataccgg ggaaaaggga aactatatcg
     1981 atatcggctt tgaaggacgt tgccgcctca ccgacatgaa tggcaagctc agcgccgccg
     2041 ttagcgtgga gatcaccggt cttgcgccct cggaagaggg tgggggaacg cacggcacca
     2101 cgatgccggt gttgcgcagc acgcgcctga acattgactc cgttctggtt ccgggcaagc
     2161 cgcagatcat tggcggtatt gatgatctgg ccagcaagaa gcggatgcag gtggaggtta
     2221 cggccaccag gatcgactag tcttaatcca tgtggcggcg tcaagccggg cgccgccttc
     2281 gactttaagg aaccagtcat ataaacctga ttgctttccc tctccgcaga ctgcaaaatc
     2341 atcccagagg cgcgttccta accagtggcc aagctaagac tcacggcagc tctccttctc
     2401 accgccggtt tgctgttccc aaaaatttct gtggcgcaaa gcgtagccgt ggctgcgccg
     2461 cctgccgccg cttcggaaaa gatctctccg acgccggaca aactcactgc agcgcgcgct
     2521 ctcttccagc agggaagatt caaagaggcc gttgcggtcc ttgcccctgc ggagcagatc
     2581 aacccgacag ccgacgccta tgcactcgaa gtccgcagcc tgcttaagct cgacgatgtg
     2641 acagcagcgg agagcaagtc gcaacatgcc gttgagctct ttccgcgatc ggcaattgtg
     2701 ctggcggctc gcggtgacgc tctgtttcgc cgtgggttga tggccgatgc ggaggaccag
     2761 tatcgcgccg cgctcaaact gaatgactcc tgcgagcgcg cctggctggg aatggggcga
     2821 atttactcag cagcatcccg gcgcaaagat tcgaaagacg cgtatacccg cgctcacgaa
     2881 ctcgatccca ccgacggcga tgcctactac tactgggcgc tcgggttgca atatccacag
     2941 aacgtaaccg aactggaaaa gcatctcgcc ggttttccag atgatgccga acgagagcgg
     3001 catgagcgtg aatacatcga tttcctgaaa gcgcttcgcg gacgcaaagt gtgggtaccg
     3061 gtgaagcagc cggaacacgc cgaactaaag cttcaggccg tgctcagcga ttcggtgccc
     3121 cgtccgcgct ctccgctcag cggagcgcaa tctgtgctgc cgcccgccga cagtcgcttg
     3181 cgaggcttct cacttcaggt caggttgaat gacaaggcga acgcgtcagt gatgctcgat
     3241 acgggcgcat ccgggctgac aatcagccgg aagctggcgg aaaaagctgg cgccatcagg
     3301 ctctctgaac actcgctgga aggggtgggt aacgccggtc cggcaaaagg gtatgaggcg
     3361 tggctcgaca aagtcactgt cggggaattc gagttccacg actgccacgt gcatgtctcg
     3421 ccgcaggaga atgccgacta cgatgggctg atcggcaccg acctttttga cgatttcctg
     3481 gtgaccgtgg attttcccgg gcgcaagctg cacctggagc ctctgccaaa agcgccggag
     3541 cagccaccaa cttccgcgcc ggccaacttc acccaaatct accgcttcgc ccacatcatg
     3601 ctgatcccca ccaccgtagg caagtctgct cgcggtctgt ttgtgctcga tactggcgcg
     3661 tttaccaatt ccatttcgcc gcagcttgcg cagcaggtga caaccgtccg caagtctgac
     3721 gtgtatgtga aaggcgtcag cggaagcgta gccaacgttt tctccgctga cgaggcaacg
     3781 ctccacttct cacgcttcag ccagcccaat gaaagcatgg ccacctttga cgtgaacggc
     3841 ctcagcaaag atctgggaac ggaagtctcc ggtttcatcg ggttcgccac attgcgcaag
     3901 atgcagatga tcatcaacta tcgcgacggc ctggtaaatt tcgattaccg gcaatagcag
     3961 gcacgatgaa tttttcactt cggtgttact gtccttcggt ccttacatat ctttgccaac
     4021 ttttaatacg gcaataatct tcgggaccaa gccggctgtt aggtttttag cggcctggga
     4081 gggccaaagt gtgaaaaagc ccctcacgat tgccgcgctg attgtgctcg cggcctcgct
     4141 ggttacagct caggattctg ataacaagaa caacgacaat cgcttccatt tcagaccgaa
     4201 cacgctcgtt ctgagccgca gtgtgtacgc gggcaactcc ggtacggttt cggttgggca
     4261 ggttctgcct ccgggatgcg tggcgcgcac cgttacactg cccttgctgg ccggcggaac
     4321 aaccaccgtg aaggtgaagt gcgcaaccgc ggttgcggat ggaacctatc ccaccgtgtt
     4381 caacaacgat ggtccggatg gcagcttcgg catcacgtcg ccgattttcc tcgataacat
     4441 ccgcaccaat ggagagcgcc tgggtacgct gccggtgccg agcgaactca ttgtgacgag
     4501 cttcagttca aaatccgaac tggctctgaa tcgctcaacc gatggaaagt cgatcacgtt
     4561 cgtggggtat cacggcggcc ctggatttgt gactggaccg aatcagcttg acgtatcgaa
     4621 ctccaacacc cccggcgttg ttgatccaac caatccggtg agcacgcagt atttccgctc
     4681 cgtggctgaa gtggatgcga acggccacgt tcaggtgacc gatggaaatg cctacagcgg
     4741 caacaacggg cgggcggcga ttaagggcaa tggccttttc tatctggccg gaaatgacaa
     4801 taatggtggg ctttcctccg cccaactcac cacaacccag gtcggcatga acctgatcac
     4861 ctccacgggc gcggaactgc tggttccggg acaagtgcct ccgcttccac cagatatcgc
     4921 caagctggga gaattcgcca tcacacaggt tggctacaag gcgccggaca aagccggtaa
     4981 agacaacaac tttcgcggga tcacgatttt caacaacact cttttcgtga ccaagggtag
     5041 cggtggcaac gggatcaaca ccgtttatca ggtgggaaat gccggtatgc tgccttctgg
     5101 caacgctgct gatttggcaa agcttcccct caccattctt cctggattcc caacctcgct
     5161 ggcgagcggc gtagaccaga acggcaaggc cgccccggtc tcgttcccgt tcggaatctt
     5221 ttttgcagat gcccacactc tgtatgtgtg cgacgaaggc gatggcactc tggtcacgcc
     5281 gccggtgaac ggcaatgttg ccaccgctga cagccaagca cgggctggac tgcaaaagtg
     5341 gggatttgaa aacggatcat ggcatctgct ttacacactt caggatggcc tcaacattgg
     5401 agttccatat agcgtgctca actatcctgc ggaactcagc cctgccaccg gcggct
//
LOCUS       DASQYP010000388         3611 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_316576, whole genome shotgun sequence.
ACCESSION   DASQYP010000388 DASQYP010000000
VERSION     DASQYP010000388.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 3611)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3611)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3611
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_316576"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..563
                     /locus_tag="VE783_12695"
     CDS             <1..563
                     /locus_tag="VE783_12695"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX54306.1"
                     /translation="LQTMVQIGVTSDGKGTNGSMAFVGNDLYLPENNDLGVMRNAVTC
                     AGACVASPIALANVFFAAAVATDGTNVYVANSPGASPAYIVRYNTATGRETILINGGA
                     IPAGMTATSNVNPNQGGSPVVPNVRTIGSMQDPFLLAGPSYPFRFILAMYVDPAGNLV
                     FGDDPFAGARAQRGHSWMVPSVASIP"
     gene            complement(838..1539)
                     /locus_tag="VE783_12700"
     CDS             complement(838..1539)
                     /locus_tag="VE783_12700"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HYX54307.1"
                     /translation="MKKLLVVEDEAHIAQGLRFNLEAEGYAVEVCEAGEQALALLAHD
                     PRRFDLVVLDVMLPGKSGFEVAGELRSVRNYVPLLMLTARGRPEDVLKGFESGADDYL
                     PKPFNLDILMARINSLLRRKQWLQEGPAPAEQHIYHFDGVAVDFAKLQLQRGQEIHQL
                     TVMELELLRYLIRHGGRAVSRKEILENVWDLKEDTDTRAIDNFIVRLRRYIENDPAKP
                     VHLLTVRGLGYQFVP"
     gene            complement(1536..2441)
                     /locus_tag="VE783_12705"
     CDS             complement(1536..2441)
                     /locus_tag="VE783_12705"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing sensor histidine kinase"
                     /protein_id="HYX54308.1"
                     /translation="MRITRRTKAIAFFITLGSVLVGIAIFLNITWIVLNWREVVPLVL
                     GIIFFGVIIAGVVLNTIFLVREVRRNEQQDSFLNAVTHELKTPITSLRLYLQTLERRQ
                     LDDNKRRDFYRLMLEDTDRLLSTVDQVLQASEVRQRSGKNNWQDVDFAAIVQESVELA
                     QIRHALSPEEFGFGRKAQGQITLMGNPEELRTAVANLLENAIKYTKPPRKIVIDLLSP
                     DMDTVLLSVRDNGPGIAKPELKRIFKRFYRVYSRGQEQVKGTGLGLFIVRSIVRRHGG
                     DAWAESEGPGNGSTFWIRLPRVYHV"
     gene            complement(2575..>3611)
                     /locus_tag="VE783_12710"
     CDS             complement(2575..>3611)
                     /locus_tag="VE783_12710"
                     /inference="COORDINATES: protein motif:HMM:TIGR01777.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="TIGR01777 family oxidoreductase"
                     /protein_id="HYX54309.1"
                     /translation="RLRSAFFNFYTLNMFNAKERGSRRSRKIVLAGGTGQIGTILARH
                     FHSQGDYVTVLARHGAALPWKVVLWDARTLGDWTEVLEGSEVLINLAGRSVNCRYNTK
                     NRREIIDSRLESTRILGLAVARCERPPVLWTNASTATIYRHALDRPMDEATGELGGKE
                     PDAPDTWKFSIDVARRWEAAFFEGATPLTRKIALRSAMIMSPDRGGVFDTLVRLVRLG
                     LGGKAGSGDQFVSWIHDHDFMRAVEFLIQSNTDGVVNLSAPCPLPNAEFMRVLREAYG
                     IRIGLAATNWMLEIGALFMRTETELILKSRRVVPGRLLDAGFEFQFPNWCESAQDLTR
                     RWRFGENSTQ"
BASE COUNT          765 a         1078 c         1018 g          750 t
ORIGIN      
        1 ggttgcaaac gatggtgcag atcggcgtga cctctgacgg caaagggacg aacggctcca
       61 tggcattcgt gggcaacgat ctctacctac cggagaacaa cgacctcggc gtgatgcgca
      121 atgcggtgac gtgtgccggc gcatgtgtgg cctcgccaat cgctctggcc aatgtattct
      181 ttgcggcagc cgttgccaca gacggcacca acgtctatgt ggccaactcg cctggggcct
      241 cgccggcata tatcgtgcgc tacaacaccg ccaccggacg cgaaaccatc ctgatcaatg
      301 gcggagcgat tccagccgga atgacggcga cgagcaacgt aaatccgaac cagggtggca
      361 gcccggtggt gccgaacgtg cgcaccatcg gcagcatgca ggatccgttc ctgctggcgg
      421 gaccgagtta tcctttccgg ttcattctgg ccatgtatgt ggatccagcg gggaacctgg
      481 tcttcggtga tgatccattc gccggagcac gcgcgcagcg cgggcacagc tggatggtgc
      541 cgagcgtcgc ctcaatcccg taacctttta cttgcaactg cagccaaccg acggcccggg
      601 ttcgcttccg ggcctttcgt ttttagcgag agccggctga tccaatgtca catgacagat
      661 gtgattaagc agattaattt ggctttaaga aattccttag caggcgcgca gtatcttctt
      721 cttgtgagcg acaaagtcgt cactctcctc aagcatctct gttcatgaaa aaaagatagg
      781 agcgcagcca agcgacccgg atcaaccagt ccgggtcgtt tttttggagc tgctcactca
      841 cggaacaaac tgatagccaa gcccacggac ggtaagcaag tgcaccggct tggcaggatc
      901 gttttcgata tagcggcgaa gtcgcacgat gaagttatcg attgcccgcg tgtcggtgtc
      961 ttccttcagg tcccagacgt tttcaagaat ctcttttcgc gagactgcac gtccgccatg
     1021 gcggatcagg tagcgcagca gctccagctc catcacggtg agctggtgga tctcctggcc
     1081 gcgctgaagc tgtagcttgg cgaaatcgac tgcgacccca tcaaagtgat agatgtgttg
     1141 ttccgcgggc gcaggccctt cctgcagcca ctgcttgcgg cgaagcaggc tgttgatgcg
     1201 ggccatgagg atgtcgaggt taaaaggctt gggaaggtag tcgtcggctc cgctttcaaa
     1261 gcctttgagc acatcttccg ggcggccacg cgcggtgagc atcaggagag gaacatagtt
     1321 cctgacgctc cgcaattcgc cggcaacttc aaagccgctc tttccgggca gcatcacgtc
     1381 gagcaccacc agatcaaacc ggcgcgggtc gtgtgccagc agcgcaagcg cctgctcgcc
     1441 cgcttcgcac acctccaccg catagccctc ggcctccagg ttgaagcgga gtccctgggc
     1501 gatgtgtgct tcgtcttcca ccaccagcag cttcttcata cgtggtaaac cctcggcagg
     1561 cggatccaga atgtgctgcc attaccaggt ccttcgctct ccgcccacgc gtcaccgcca
     1621 tgccgtcgta cgatggaacg cacgataaaa aggcccagcc cagtcccttt cacctgctcc
     1681 tggccgcggc tgtatacacg atagaagcgc ttgaaaatcc gcttcaactc cggtttcgcg
     1741 atgccggggc cattgtcacg cacgctgagc agaacggtat ccatgtccgg cgacaacaaa
     1801 tcaatgacga tcttgcgtgg cggtttagtg tacttgatcg cgttctccag caagttggcc
     1861 accgcggtgc gcaactcctc aggattgccc atcagcgtga tctgcccctg ggcttttcgc
     1921 ccgaagccaa actcctcggg agaaagtgca tggcgtatct gcgccagctc tacactctcc
     1981 tgcacaatgg cggcaaagtc gacatcttgc cagttgtttt tgcctgaccg ctgccgcacc
     2041 tcgctggcct ggagaacctg gtccacggtg ctcagcaggc gatctgtatc ttcgagcatg
     2101 agccggtaga aatccctgcg cttgttgtcg tcgagctgcc ggcgctcaag cgtttgaaga
     2161 tagagacgaa gggacgtaat gggagtcttc aattcatgag tgacggcgtt gagaaagctg
     2221 tcctgctgct cattgcgccg cacctcgcgg acgagaaaga tggtgttcag caccaccccg
     2281 gcaatgatca cgccgaagaa gataatgccc aggaccagcg ggaccacttc acgccagttg
     2341 agaacgatcc aggtgatgtt gagaaagatg gcgatgccca ccaggaccga gcccagcgtg
     2401 atgaagaatg caatcgcctt ggttcgccgc gtgatccgca tgaacaggga agcagtgcta
     2461 tgccgattct aacctgtcat cacgtcccga gcgcagcgag ggcgccctat tgccaccata
     2521 gatcctgggt actcacgagc ctgcatgaga aggtgtcgca cggccgggaa ctgctcattg
     2581 agtgctgttt tccccgaaac gccatcttcg tgttagatcc tgcgctgact cgcaccagtt
     2641 ggggaattga aactcaaatc ccgcgtcgag cagacggccg ggcacaaccc gcctgctctt
     2701 gagaattaat tctgtttcgg tccgcatgaa aagcgcgcca atctccagca tccagttcgt
     2761 agcggccaag ccgatgcgga ttccataggc ttcgcgcaac acacgcatga actcggcgtt
     2821 cggtaaaggg cagggagcac tcaggttcac gacgccatcg gtgtttgact gaatcagaaa
     2881 ttcgacggcg cgcatgaagt cgtgatcgtg aatccaggag acaaactgat caccgctgcc
     2941 ggccttgcct cctaagccga gtctgacgag ccgaacaagc gtgtcgaaga caccgccccg
     3001 atccggactc atgatcatgg cgctgcgcag ggcgattttt cgcgtcaatg gtgttgcgcc
     3061 ttcaaagaaa gctgcctccc agcggcgagc cacgtcaata ctgaacttcc acgtatcggg
     3121 agcgtccggt tctttgccgc ccagttctcc tgtggcttcg tccatgggac ggtcgagagc
     3181 gtggcggtaa atcgtcgcgg tgctcgcatt cgtccacagc accggcggcc gctcacatcg
     3241 agccacggca aggcccagaa tgcgcgtgct ctcaagtctg gaatcgatga tctctcgccg
     3301 gttctttgtg ttgtagcggc aattcacgct acgaccggca aggttgataa gaacctcact
     3361 gccttccaga acttcagtcc aatcgcccag agtgcgggca tcccagagca ccactttcca
     3421 gggaagtgcg gccccgtgcc gagccaatac tgtgacgtaa tcaccctgtg agtggaaatg
     3481 gcgcgccaga attgttccga tctggcctgt gccgcccgcc agcacgatct tgcgagatcg
     3541 ccgagatcca cgctctttag cattgaacat gttcaaagta taaaagttga agaacgcgga
     3601 gcgcaatctc g
//
LOCUS       DASQYP010000389         2007 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_316979, whole genome shotgun sequence.
ACCESSION   DASQYP010000389 DASQYP010000000
VERSION     DASQYP010000389.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 2007)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2007)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2007
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_316979"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..501
                     /locus_tag="VE783_12715"
     CDS             <1..501
                     /locus_tag="VE783_12715"
                     /inference="COORDINATES: protein motif:HMM:NF016214.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal-dependent hydrolase"
                     /protein_id="HYX54310.1"
                     /translation="EKALVTVAAIAPDIDSVGILPELLTRNTAHPLLWFSEYHHSLHT
                     LAFSLLCSCGSFVLLRKTSTRWHTSSVVFVSFHLHLLGDLVGARGPDGYQWPIPYLKP
                     FSDALQLSWYGEWALNAWQNIMITCSLLAVTLWIAWKRGESPVQFVSEKADRALTQVL
                     RARFSR"
     gene            complement(599..787)
                     /locus_tag="VE783_12720"
     CDS             complement(599..787)
                     /locus_tag="VE783_12720"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX54311.1"
                     /translation="MIMMLQLSHFSAAFIFAFFSSIVFGICFRNHPRDMVRYGGYCFA
                     VFMGGMIVAGWLMWLIKH"
     gene            complement(784..1152)
                     /locus_tag="VE783_12725"
     CDS             complement(784..1152)
                     /locus_tag="VE783_12725"
                     /inference="COORDINATES: protein motif:HMM:NF042755.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6677 family protein"
                     /protein_id="HYX54312.1"
                     /translation="MTTMTVVATALAWFIPGAGHLVQKRWIRGLLLMFSVVAMFAFGL
                     AMEGKIYKPNTGDLLDMLGFVSDLGAGVLYVIGRVMDWGGPAISTAAADYGTKYIAVA
                     GLLNIISAVDAYHIAIGKKP"
     gene            complement(1213..>2007)
                     /locus_tag="VE783_12730"
     CDS             complement(1213..>2007)
                     /locus_tag="VE783_12730"
                     /inference="COORDINATES: protein motif:HMM:NF012766.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M24 family metallopeptidase"
                     /protein_id="HYX54313.1"
                     /translation="SFGKEIISSGDLVARFDAAWSEEQIASHYAARDAIDAIVAQAFP
                     EIGRRVRNGGATEYQIQQWFAEAFRRESIVTEDLPIVAVNQNSGNPHYEPKAEGSATI
                     KSGDFVLLDVWGKKNTAGAVYYDITWTGVIGTPTDKQQEIFNIVTGARDAGVRKVQEA
                     YSMKRRICGWEVDHATREHITAAGYGEYFVHRTGHSIGEHVHGNGANMDNLETKDERE
                     IIPNSCFSIEPGIYLPEFGVRSEVNVLIHNGAAEVTGKIQRELVII"
BASE COUNT          419 a          580 c          560 g          448 t
ORIGIN      
        1 gaaaaagcgc tggtgacggt ggccgcgata gctcctgata tcgacagtgt gggaattctc
       61 ccggagttgc tgacacgaaa tactgcgcat ccgctcctct ggttttcgga gtatcaccac
      121 tcgctccaca cactggcttt ctcactgctt tgcagctgcg gaagtttcgt tttgcttcgc
      181 aaaacctcaa ccagatggca tacctcgtcc gtcgtttttg tgagcttcca tctgcatttg
      241 ctgggtgatc tcgtgggggc tcgcggtccc gatggctatc agtggccgat tccgtacctt
      301 aagcccttct cagatgcact gcagctgagt tggtacggag agtgggcttt gaatgcctgg
      361 cagaacatca tgatcacctg ctccttactc gctgtgactc tctggattgc gtggaaaaga
      421 ggagaatcgc cggtgcagtt cgtttctgaa aaagcagatc gagcgctaac acaggtgctg
      481 cgcgcacgct tttctcggta gatgatgacg ctaacccagc ttgcgcgccg atcggcctgt
      541 aaaaatgcag cttgcgagaa ctaaacctcc ggcggtttgt ggcgaggcga cagaaacgtt
      601 aatgcttaat caaccacatc agccagccgg ccacaatcat gccgcccatg aatacggcga
      661 agcagtagcc gccatagcgc accatgtcac gcgggtggtt gcggaaacaa atcccaaaca
      721 caatggatga gaagaaggcg aagatgaacg ccgcactgaa atgagaaagc tggagcatca
      781 taatcatggc tttttcccga tcgcgatgtg gtaggcgtcc acggcgctga tgatgttcag
      841 caaccccgcc accgcgatgt atttcgtccc gtaatcagcc gcggcagtag agatggccgg
      901 gccgccccag tccattactc gaccaatcac gtagagaact cccgccccga ggtcgctgac
      961 gaagcccagc atgtcgagca ggtcgccggt gttcggtttg tagatcttgc cttccatggc
     1021 caggccaaag gcgaacatcg ccaccacaga gaacattagc agcaggccgc gtatccagcg
     1081 cttctggacc agatgtcccg cgccgggaat aaaccaggcc aacgccgtgg cgactacagt
     1141 catggtggtc atggggggcg ccgccgcacg agtttgggtt tgtggagttg tagtggtctg
     1201 aggctctgcc atttatatga ttaccagttc gcgttgtatt ttacccgtaa cctcggccgc
     1261 gccattgtga atcagaacat tcacctcgct gcggacgcca aactcgggca ggtaaatccc
     1321 cggctcaatg gaaaagcagc tgttggggat aatttcgcgc tcgtccttgg tctcgagatt
     1381 gtccatgttg gcgccgttgc cgtgcacgtg ctcgccgatg gagtgcccgg tgcgatggac
     1441 aaaatattcg ccgtaaccgg cagccgtaat gtgctctcgg gtggcgtggt ccacctccca
     1501 gccacagatg cgacgcttca tgctgtaggc ttcctgcact ttacggacgc ccgcgtcccg
     1561 cgctccagtc acgatgttga aaatttcctg ctgcttgtct gtgggcgtgc cgataacgcc
     1621 ggtccatgtg atgtcgtaat aaacggcgcc agccgtgttc ttcttgcccc agacgtccag
     1681 caggacaaaa tcgccggact tgatcgtggc tgagccttca gctttgggct cgtaatgagg
     1741 attgccgctg ttctggttca ccgcgacaat cggaaggtct tccgtaacaa tgctctcgcg
     1801 gcggaacgcc tcagcaaacc actgctgaat ctggtattcg gtcgcgccgc cgttgcgaac
     1861 gcgccgccca atctcaggga aggcctgggc cacaattgca tcaatggcgt cacgcgcggc
     1921 atagtggctg gcaatctgct cttccgacca cgcggcatcg aatcgcgcca ccaagtcgcc
     1981 tgagctgatg atctctttcc cgaaact
//
LOCUS       DASQYP010000390         3302 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_316991, whole genome shotgun sequence.
ACCESSION   DASQYP010000390 DASQYP010000000
VERSION     DASQYP010000390.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 3302)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3302)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3302
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_316991"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(178..759)
                     /locus_tag="VE783_12735"
     CDS             complement(178..759)
                     /locus_tag="VE783_12735"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX54314.1"
                     /translation="MCWHSRGVISLDFRYRFAYYVPMPSLIFPDAWVVECAGCRCVIT
                     CFALDPQTEHMNQSTAPPATSAQVACPCCLGTYRYGEKAIRRGKIQPNPACRRKRDAQ
                     PSAHPGGTAGASLSPKPAATSAPTAFAASSANQNGAKHDAKLDGALLVGACLIAAIRM
                     GSAEVRPSPKLTFTVSESVRLAREVLGELQRSR"
     gene            1154..1717
                     /locus_tag="VE783_12740"
     CDS             1154..1717
                     /locus_tag="VE783_12740"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX54315.1"
                     /translation="MKRTWKIAICIAAAVVLVGVSLPALSASGGEQYQAQAMGEGTQM
                     GQTFGVTININEYSTTEDQQVLIQALETKGTQGVYNALDKMGSKGRIRITGTLGFDAN
                     YIHVIQMPDGMRKIRLVTDRPITFGEAWTDSRSEDYNLSALELDVDANGKGTGTLLPA
                     CQFKIKNHQLEIDALRNPWRLVDVFRW"
     gene            complement(2420..>3302)
                     /locus_tag="VE783_12745"
     CDS             complement(2420..>3302)
                     /locus_tag="VE783_12745"
                     /inference="COORDINATES: protein motif:HMM:NF019344.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HYX54316.1"
                     /translation="LKNPNRPVGSFLFLGPTGVGKTEVARTLAQFLFGSEKSLIRFDM
                     SEFMEKHSVSKLIGSPPGYVGYEEGGQLTERVKRSPYSVVLLDEIEKAHPDVFNILLQ
                     VLEDGQLTDGLGNTVDFKNVIIVMTSNIGARHLMKRKGLGFQIDKEEMVSEKVEDMVK
                     QEVKKTFNPEFLNRLDEVIIFNALADPDLIQILELLVQQLNGNLAQRQITITVTDQAK
                     KWILDKTLVDRSYGARPLRRALQRYIEDPLSEALIQGTFTTRPAFIEVYLDGEKLFYR
                     EVGEGAENTEGVLLYNN"
BASE COUNT          685 a          957 c          924 g          736 t
ORIGIN      
        1 aaaaaggcgg cggttcgtac ttccatagga gcaggaatat ccctgccagt ggcgacgtgg
       61 atgagaatgc tgaaaccgaa acagaagatt aaatagctta gtggagacta aaccggccca
      121 ggcgacgcgc ctgtgctgca aagcccgtta tcgagtcatt tttgagacag tttctagtca
      181 tcgcgagcgc tgcaactccc ccaacacttc gcgggccagg cgcacggact cagacaccgt
      241 gaaggtcagc ttggggctgg gtctcacttc ggcagagccc atccggatgg cggcaatcag
      301 gcacgcgccc accagcagcg cgccatcaag tttcgcgtcg tgctttgccc cgttctggtt
      361 tgcagagctt gcagcgaacg ccgtcggcgc ggaagttgcg gcgggtttgg ggctgagact
      421 tgcgcccgcc gtgcctccgg gatgggcgct gggctgggca tcgcgcttgc ggcggcaggc
      481 tgggttgggc tgtatctttc cccgtcgaat cgctttctcg ccatagcgat acgtgcccag
      541 acagcacggg caggccacct gagcagacgt cgccggcggc gcggtgctct ggttcatgtg
      601 ctcggtctgc gggtcgaggg cgaagcaggt aatcacgcat cggcagcccg cacactcaac
      661 cacccaggca tcaggaaaga ttagagaggg cattgggaca tagtaggcga aacgataacg
      721 aaaatcaaga gagatcacgc cgcgactgtg ccagcacact ggggcacatt cataccattt
      781 caaatggcag caactcagtc tagaacaatc gcatcgagtc tggctggaac gtgctgggaa
      841 catgcgcagg accaaggaac ccaaaccgcc acaggaagac ccggacctct ggatagcgcc
      901 acggcctggt actgaggaac acctggtcag tagccagctc tctggcattt cttacagttc
      961 cgtgtgacat ccagcccatc tactctgtcc tcagggggca ccagaaatcg cgcaaagctc
     1021 tgcccttggc cgagcagggt gaagtggtta cttccgtttg ttttgctaga agattgcttt
     1081 cctcccccgc cactcctccc tggctatgga caattccggc attgcagtcg cgattccgaa
     1141 aggagccacg tcaatgaaaa ggacatggaa aatcgcaatc tgcatcgccg cggcggtagt
     1201 gcttgttggc gtttccttac ccgcactgag cgccagtggc ggcgagcagt atcaggccca
     1261 ggccatgggt gaaggcaccc agatgggcca aacctttggc gtcaccatca atatcaacga
     1321 atattcaact actgaagacc agcaggtcct gattcaggcc ctggagacaa aaggcacgca
     1381 gggcgtctac aacgccctgg ataagatggg ctccaaaggt cgcatccgga tcaccggtac
     1441 cctgggcttt gatgctaact acatccatgt gatccagatg ccggacggca tgcgcaagat
     1501 caggctggtc actgaccggc ccatcacctt tggcgaagcc tggactgaca gccgctccga
     1561 agactacaac ctctcagccc tggagcttga cgtggacgcg aacggcaaag gcacaggcac
     1621 gctgcttccg gcatgccagt tcaagatcaa gaatcaccaa ctggaaatcg atgctcttcg
     1681 caatccatgg agattggttg acgttttccg gtggtaaccc gtgagaagag ccttgtaagc
     1741 gcttcctgaa agcgcattcc tgaagtgact gggcggagcc cattaactcc gcccgttttt
     1801 tatctagcgt tccgggttca cggaccagtc ggctccaata gactccccct tcccggacgc
     1861 gccgcgctcg cggtcgatac ttcagttcgt gcttttcggc aggccgggac gtcttccatc
     1921 gtgatgtaca aaaaactcca gcgttcgcga gctgtcgttt gggtattgtt ggaagctgtc
     1981 ttaaaaacga ctcgatcgta aaatggcttg tagcacaggc gccctcgcct gtgccggttt
     2041 actctccact gagctacgga gggttgatct tctgtttcgg tttatgcgtt ctcatcccac
     2101 gttgccaatt cctgggatat tcctgctcgt aatagaacta ccaagcgtcg tctgttttaa
     2161 tgtgcggcaa cttgggggcg gcagaactgt catttttgcg gcgtaggcga ggggtgcctg
     2221 tgctgcacag ttaataagaa gttacgttca agcgcggaga gaagtcgccc cgggtcatca
     2281 aatcaagcgc tcattgcctt cccatgttcc ttcttgcggc ttcgttcctg ttccgagtgt
     2341 ccccgcgttt tgcttggagc gcgttcgcac aaaaaaaagg ccgccctttg ccggcggcct
     2401 cttgtttaaa gttgaaagct tagttgttgt agagcagcac tccctcggtg ttctcggcgc
     2461 cttcgcctac ctcgcggtag aagagttttt caccgtcgag gtaaacctca atgaacgccg
     2521 gccgggtggt gaatgtgccc tggatcagcg cttctgacag cgggtcttca atgtaccgct
     2581 gtagggccct gcgcagcgga cgcgcgccgt agctgcggtc caccagcgtc ttgtccagaa
     2641 tccatttctt cgcttggtca gtcaccgtga tggtgatctg ccgctgcgcc aggttgccgt
     2701 tgagttgttg caccagcagc tcaaggatct ggatcaggtc aggatcggcg agcgcgttga
     2761 agatgatcac ttcatccagc cggttcagga actccggatt gaaggtcttc ttcacttcct
     2821 gcttcaccat gtcttccact ttttctgaga ccatctcttc cttgtcgatc tggaagccga
     2881 ggcccttgcg cttcatcagg tgccgcgcac cgatgttcga ggtcatcacg atgatcacgt
     2941 tcttgaaatc caccgtgttg cccaggccgt cagtgagctg tccatcttcc agcacctgca
     3001 acaggatgtt gaatacatcc ggatgcgcct tttcgatttc gtccagcagg accaccgagt
     3061 aaggagaccg cttcacgcgt tcggtaagct gtccgccctc ttcatagccc acatatcccg
     3121 gaggcgagcc gatcagcttg ctgaccgaat gcttctccat gaactccgac atatcgaagc
     3181 ggatcagcga tttctcgctg ccgaacagga actgcgccag cgtgcgcgcg acttcggttt
     3241 tgccaacgcc cgttggtccc aggaacagga acgatcccac gggacggttc gggttcttca
     3301 gt
//
LOCUS       DASQYP010000391         3675 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_20556, whole genome shotgun sequence.
ACCESSION   DASQYP010000391 DASQYP010000000
VERSION     DASQYP010000391.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 3675)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3675)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3675
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_20556"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1491
                     /gene="glmU"
                     /locus_tag="VE783_12750"
     CDS             <1..1491
                     /gene="glmU"
                     /locus_tag="VE783_12750"
                     /EC_number="2.3.1.157"
                     /EC_number="2.7.7.23"
                     /inference="COORDINATES: protein motif:HMM:TIGR01173.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003977 - UDP-N-acetylglucosamine
                     diphosphorylase activity [Evidence IEA];
                     GO_function: GO:0019134 - glucosamine-1-phosphate
                     N-acetyltransferase activity [Evidence IEA];
                     GO_process: GO:0009103 - lipopolysaccharide biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional UDP-N-acetylglucosamine
                     diphosphorylase/glucosamine-1-phosphate
                     N-acetyltransferase GlmU"
                     /protein_id="HYX54317.1"
                     /translation="PNLPGVAAARTIHPQRDGCSTSRRPVTVAADRKFAIVIMAAGKG
                     TRLKSKRAKVLHEISGKPLLAHVIEAAGKVVPAEDIQVVIGHQAEAVRDAVKSYGVQF
                     VLQAEQRGTGHAIMCARQQVKNYENLLVLSGDVPLIRTETITHVRDFHLAKKAAMTIL
                     TAEPPDPFGYGRIIRAAAGSERVKAIVEQKALTKAQQKTREINSGIYAFATRPLFSNI
                     DRLSTDNAHHEFYLTDMAALLVKAKLPVLALKAADFAEVLGANTLAELASLDANLRMR
                     KCYQLMAAGVSIYRPETCVIDPDVEIAPDTIIEPFVQVLGKSSIGSDCRIRSYSVISD
                     SKIADGVLVRHGCIIDQSHVGAGALLGPYSHLRPASEIGAGAHVGNFVETKKTRLGRG
                     SKANHLTYLGDAEIGEGVNVGAGTITCNYDGVHKHLTTIEDGAFIGSDSTLVAPVKIG
                     KRAYVAAGSSITHDVPEDSLALGRAHQTVKEGWAKKRRDLQAAKAK"
     gene            complement(1782..2066)
                     /locus_tag="VE783_12755"
     CDS             complement(1782..2066)
                     /locus_tag="VE783_12755"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX54318.1"
                     /translation="MWTETFNCDVCGKQKGNVDHWWLAWTEPHSPHPDAPERELFKIY
                     PWENMMAHDATVKHLCGQACLQRLVERWLNTEASTSTRDIHQGEFRKASA"
     gene            2459..>3675
                     /locus_tag="VE783_12760"
     CDS             2459..>3675
                     /locus_tag="VE783_12760"
                     /inference="COORDINATES: protein motif:HMM:NF025006.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxypeptidase-like regulatory
                     domain-containing protein"
                     /protein_id="HYX54319.1"
                     /translation="MMSSFVRSLRPLMAALLTLLCGTLLLAQSTTDGAIGGTVFDTHG
                     AVVPKAKVVLRNNGTNAEKTVTTDESGYYRATNLQPGSYTVSINQTGFAPYKAEQVIV
                     QVGSVTEVSPHLGVSATTETVDVTAEAPQINTTSPEFAPSFNQTAIANLPINGGRWSS
                     FAILTPGVVSDSSGFGLLSFRGISTLLNNNTVDGADNNQAFFSEERGRTRAGYSTPQL
                     AVEEFQVNTSNYSSEYGRSAGGVINTVTKSGTNAIHGEVDLFDRDNTFGAMNEFTKIA
                     VQTAPGVFTQQPFKPTDWRKRVAGQVGGPAIKDKLFYSLTFDWYDRNFPGTAVATNPG
                     AFFAQQFDGTVPGHPVSANITQLAKNLFNTATPTQAQLTSALNTYNTDLAGLNSMLGP
                     VGRDGEQYIIYPK"
BASE COUNT          823 a         1102 c         1008 g          742 t
ORIGIN      
        1 ccgaatctgc caggagttgc tgcggctcgc acaatccacc cgcaaagaga tggctgcagc
       61 acatcgcgga ggccggtgac cgtggctgcc gatcgaaagt tcgccattgt gatcatggca
      121 gccggcaagg gcacccgtct caaatcgaag cgcgccaaag tcctgcatga gatctcaggc
      181 aagccgctgc tggcccatgt gattgaggct gccggcaaag tcgtcccggc agaagacatt
      241 caggtcgtga tcggccatca ggcagaagct gtacgtgatg cggtgaagag ctacggcgtg
      301 cagtttgtat tgcaggcgga acagcgcgga accgggcacg ccatcatgtg cgcgcgccag
      361 caggtcaaaa actacgaaaa ccttctggtg ctctcaggtg acgttcctct gatccgcact
      421 gagaccatca cccatgttcg cgattttcat ctggcgaaaa aagcggccat gacgatcctt
      481 accgccgagc ctccggatcc tttcggctat ggcaggatca tccgcgccgc tgcaggaagc
      541 gagcgcgtga aggcaatcgt cgaacagaaa gccttgacca aagcgcagca gaagacccgc
      601 gagatcaatt ccggtatcta tgccttcgcc accaggccgt tgttttccaa cattgaccgg
      661 ctcagcacag acaacgctca tcacgagttc tacctgactg acatggcggc cctgctggtc
      721 aaagcgaagc tgcctgtcct ggcgctgaag gcagccgatt tcgccgaggt cctgggcgcg
      781 aacacgctgg cagagctggc gtcgctggat gcgaatctcc gcatgcgcaa gtgctaccag
      841 ctcatggcgg ccggcgtgag catctatcgt ccggaaacct gtgtcatcga tcctgatgta
      901 gaaattgctc ccgacaccat cattgagcct ttcgtccagg tgctgggcaa gagcagcatc
      961 ggctccgact gccggattcg ctcctactcc gtgatcagcg actcgaaaat tgcggacggt
     1021 gtgctggtgc ggcacggctg catcatcgac cagtcgcacg tcggcgcggg cgcactgctt
     1081 ggcccctact cgcatttgcg tcccgccagt gaaattggcg ccggagctca cgtgggaaat
     1141 ttcgtcgaga ccaagaaaac caggctgggc cgcggctcaa aagccaacca tctcacctat
     1201 cttggcgacg ccgaaatcgg agaaggcgta aacgtgggcg caggcaccat cacctgcaat
     1261 tacgatggcg ttcacaaaca cctgactacg atcgaagacg gcgccttcat cggcagtgat
     1321 tccacgctgg tggccccggt gaagatcgga aaacgcgctt acgttgccgc cggctccagc
     1381 atcacgcatg atgtgcccga agattctctg gcgcttggcc gcgctcatca gacggtgaaa
     1441 gaaggctggg caaaaaagcg tcgcgacctc caggcggcaa aggcaaagta acagatattg
     1501 ggagaggaca atcactctgc agtaataaaa gccccactcg ataagagtgt agcgcagccg
     1561 ccctcggctg cgcagttccg tggcgtgtgc ggtgatcctg gggctagctt ggattttcag
     1621 cgaaaagacg cggcatgccg cgtctaactg attggcgtca gcctgcagat gggcgtgagc
     1681 ctccagcggc tttctttgtt ttcttgtgac gtagtacgcg gtcggcggcg acactccgca
     1741 cgaatcagtc ttacgatcgt gaccagctca accgtcgcga tctacgccga agccttcctg
     1801 aactctccct ggtgaatgtc acgagtagac gttgacgctt cggtattcag ccagcgctcc
     1861 accagccgct gcaggcaggc ctgtccgcaa aggtgtttca cggtggcatc atgcgccatc
     1921 atgttttccc acggatagat tttgaagagt tcgcgctccg gcgcgtccgg atgcgggctg
     1981 tgcggttcgg tccaggccag ccaccagtgg tcgacgttcc ctttctgttt cccgcaaacg
     2041 tcacagttga aagtctccgt ccacatcaca gaaccgcctc taaaagggga atagttgctt
     2101 cacggtacct gagaatgggg cggcgcgcaa ctctgaatcc gaggccgcca aaccagagct
     2161 ccagaaaatt ggagattgaa gcctctccga aggcagcaat ctacggtttt ccgtacgagc
     2221 tctcggccgg gctaaaaatt tggcctgcat ttatgccgct ttttccacaa aaaacgaaga
     2281 tttcctagct tttaatactg ctttcaccat aagagaatca gagctgatta gcatctttgc
     2341 ggacacaaaa aaacattgcg cagcagttca aaaaacaaag ctgcgcgagt agtatgtgtc
     2401 cggtttttta ctggcattcc ccactgtttc tagccagcac cttcaccagg agagaggcat
     2461 gatgtcaagc tttgtgaggt cactgcgacc gctcatggca gcgctgctca cgctgctttg
     2521 cgggactctg ttgttagcgc agtccaccac cgatggcgcc atcggcggga ctgtatttga
     2581 tacccacggg gccgtggtcc cgaaggccaa agttgttcta cgcaacaacg gaaccaacgc
     2641 ggaaaagacc gtaaccacgg atgaatccgg ttactaccgc gccaccaacc tgcagccggg
     2701 cagctatacc gtcagcatca accagacagg cttcgcgccc tacaaggcgg agcaggtgat
     2761 tgtgcaggtg ggcagcgtaa cggaagtttc gccgcacctc ggcgtcagcg cgaccaccga
     2821 aaccgtggac gtcaccgccg aagcgccgca gatcaacaca acctcaccgg aatttgcccc
     2881 cagcttcaac cagacggcga ttgccaacct gccgattaac ggcggccgct ggtcaagctt
     2941 tgccattctg acgccgggcg tggtcagcga ttccagtggc tttggtcttc tgagcttccg
     3001 cggcatcagc acacttttga ataacaacac ggtcgacggc gctgacaaca atcaggcttt
     3061 cttctcggaa gagcgcggcc gcacccgcgc tggttactcc acaccgcagc tcgcggtgga
     3121 agaatttcag gtcaatactt ccaactactc gtctgaatat ggacgttctg cgggcggcgt
     3181 catcaatacc gtcaccaaga gtggaaccaa cgctatccac ggcgaagtag atctttttga
     3241 tcgtgataac acgtttggcg cgatgaatga gttcaccaag atcgccgtcc aaaccgcccc
     3301 tggcgtattc acccagcagc catttaagcc gaccgattgg cgcaagcgcg tggctggcca
     3361 ggttggcgga cctgcgatta aggacaagct gttctactca ctcacttttg actggtacga
     3421 ccgcaacttc cccggcactg ctgttgccac caatccggga gcgttctttg cgcagcagtt
     3481 cgatggcacc gttccgggtc atccggtttc cgcaaacatt actcagctcg ccaagaacct
     3541 gttcaacacc gcgactccta cgcaggccca actcacctcg gcgctcaaca cttacaacac
     3601 tgatttggcc ggcctcaaca gcatgctggg cccggttggg cgcgatggtg aacaatacat
     3661 catctatccg aaaat
//
LOCUS       DASQYP010000392         2888 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_143483, whole genome shotgun sequence.
ACCESSION   DASQYP010000392 DASQYP010000000
VERSION     DASQYP010000392.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 2888)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2888)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2888
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_143483"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(141..>2888)
                     /locus_tag="VE783_12765"
     CDS             complement(141..>2888)
                     /locus_tag="VE783_12765"
                     /inference="COORDINATES: protein motif:HMM:NF013069.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HYX54320.1"
                     /translation="YSKVNPADAPIITLALTSDSLPLTRVEDLADTTLAQKISQLSGV
                     GMVSISGGQRPAVRIQANPRALASYNLSLEDVRTALGQANVDQAKGVLENQRQSFTIN
                     SNDQLGSAAEYRDVIIAYRNNAPVRLRDVASIVDGAENAKQAAWMGKGGKMMPAVIVN
                     IQRQPGANIIQVVDRVKKVLPQLQGALPSSVHVQILTDRTETIRASVKDVQFELMLTV
                     ALVVLVIFLFLRNLPATIIPSVAVPLSIVGTFGVMYLLGYSLDNLSLMALTISTGFVV
                     DDAIVMIENIDRFLEEGHSPLEAALMGSGQIGFTIISLTVSLIAVLIPLLFMGDIVGR
                     LFREFAVTLAVTIIISALVSLTLTPMMAARLLKNPAQARHGRFYQASERFYERVIDFY
                     GRTLKFVLKHQTVTLLATLGALLLTLYLYVIVPKGFFPVQDTGVILGISEGPQNISFN
                     AMTSLQQKLGQVILQDPDVASLSSFIGIDGTNTTQNVGRFQINLKPHDERSATGTEII
                     QRLQPKVAQVEGVSLYLQLVQDLTVENRVSRTQYQYSLEDADATELADWSNRIVNRLR
                     QMPELSDVASDQQNLGLKADLIIDRDTASRFGILPQQIDDTLYDAFGQRQVSTIFTQL
                     NQYHVVLEVGQQFQDSPTDLSHIFVKSNAGTQVPLAAFSHFETSSTPLAINHQGQFPV
                     VTISFNLAPGESLGKATKLIAAAEQELGMPPSIHASFQGTAAAFQNSLASEPWLILAA
                     LVTVYIVLGVLYESYIHPVTILSTLPSAGVGAILALMITRSDLTVVALIGIILLIGIV
                     KKNAIMMIDFALEAERGEGKKPEEAIYQASLLRFRPIMMTTMAALLGAVPLAFGTGTG
                     SELRHPLGITIIGGLLLSQLFTLYTTPVIYIWFDKLASKFSRFNIGNEITPEKEPVLG
                     D"
BASE COUNT          595 a          799 c          905 g          589 t
ORIGIN      
        1 agcatagcga gggaacccta tcttttattt tggattccat ctgcgattca tttgcgatgc
       61 tgtctgtttc tcctcaagtt tcgtttcgac tataggggtc cctccgcctg cggcgtcggg
      121 ataaagcaaa aaccaaaaac ctagtctccc agcaccggct ccttctccgg agtaatttca
      181 ttgccgatgt tgaagcgcga aaactttgac gccagcttgt caaaccagat gtaaatcacc
      241 ggcgtggtgt agagggtgaa cagctggctc agcaacagtc cgccgatgat ggtgatgccc
      301 agcgggtggc gcagctcaga gccggtaccg gttccgaatg ccagcggcac cgcgccgagc
      361 aaggcggcca tggtggtcat cataatgggg cggaagcgca gcaggctggc ctgatagatg
      421 gcctcttccg gcttcttgcc ctcgccgcgc tcggcttcca gggcaaaatc aatcatcatg
      481 atggcgttct tcttcacaat gccgatcagc aggatgatgc ctatgagcgc caccaccgtc
      541 agatcagaac gcgtgatcat caaagccagg atcgcgccca cgcccgccga gggcagcgtg
      601 gaaagaatcg tgaccggatg aatgtagctt tcgtacagca ctcccagcac gatgtaaacg
      661 gtgaccagcg cagccaggat cagccaaggc tcgctggcca gcgagttctg gaatgcagcg
      721 gcggtgccct ggaagctggc gtgaatgctg ggcggcatgc cgagttcctg ctcagcggcg
      781 gcaatgagct ttgtggcttt gcccagtgat tcgccgggcg ccagattgaa cgagatggtc
      841 acaaccggga actgcccctg gtgattgatg gccagcggcg tgctcgaggt ttcaaaatgg
      901 ctgaacgctg ccagcggaac ctgcgtgccg gcgttcgact tcacgaaaat atgtgagagg
      961 tcagtggggc tgtcctggaa ctgctgcccc acttccagca ccacgtgata ttggttgagc
     1021 tgggtgaaga tggttgagac ctggcgctgg ccgaaggcgt cgtagagcgt gtcgtctatc
     1081 tgttgcggaa ggatgccgaa gcgcgacgcg gtatcgcgat cgatgatcaa gtcggctttc
     1141 aggccaaggt tctgctggtc gctggcaacg tcactcaact ccggcatctg gcgcaaccgg
     1201 tttacgatgc gattggacca gtcggccaat tcggtggcgt cggcatcttc cagtgagtac
     1261 tggtactgcg tgcggctcac gcgattttcc acggtgaggt cctgcacgag ttgaaggtaa
     1321 agagaaacgc cttccacctg cgctactttc ggttgcagcc tctggatgat ttcggtgccg
     1381 gtagcggagc gctcgtcgtg cggcttgagg ttaatctgaa agcgcccgac gttctgcgtg
     1441 gtgttggtac cgtcaattcc gatgaaggaa gagaggctcg ccacgtcagg gtcctgcagg
     1501 attacctgcc cgagcttctg ctgcaggctg gtcattgcgt tgaacgaaat attctgcggc
     1561 ccttcagaga tgccgaggat cacgcccgta tcctgtaccg ggaagaagcc cttgggcact
     1621 atgacataca gataaagagt cagcagcaac gcaccgagtg ttgccagcaa cgtaaccgtc
     1681 tggtgcttaa gcacgaattt cagcgtgcgt ccgtagaagt cgatcacgcg ttcatagaac
     1741 cgttctgatg cctggtaaaa acggccgtgc cgcgcctgcg ccgggttctt gagcagccgc
     1801 gcggccatca tgggcgtgag cgtaagcgag accagcgcgg aaatgatgat ggtaaccgcg
     1861 agcgtcacgg caaactcgcg gaacagccgg cccacgatgt cacccatgaa gagcagcgga
     1921 atcaaaaccg cgatgagcga aaccgtcagc gagatgatgg tgaagccgat ctggccggag
     1981 cccatgagcg ccgcttccag cggcgagtgc ccctcttcca gaaagcgatc aatgttctca
     2041 atcatcacga tggcgtcatc cactacaaag cctgtggaga tggtgagcgc catgagcgag
     2101 agattgtcca ggctgtagcc cagcaggtac atcacgccga acgtgcccac gatggagagt
     2161 ggcacggcca cgctggggat gatggtggcg ggcaggttgc gcaggaagag gaagatcacc
     2221 agcaccacca gggccacggt gagcatgagc tcaaactgta cgtctttgac ggaggcgcgg
     2281 atagtttccg tgcggtccgt gagaatctgc acgtggaccg aactgggcag cgcgccctgc
     2341 agctgcggca gaactttttt gacgcggtcc accacctgaa taatgttggc cccgggctgg
     2401 cgctggatgt tgacgatgac ggccggcatc atcttgccgc ctttgcccat ccatgcagcc
     2461 tgcttggcgt tctcagctcc gtctacgatg ctggccacgt cgcgcaggcg gaccggcgcg
     2521 ttgttgcggt aagcgatgat tacgtcacgg tactcggcgg ccgagcccag ctggtcattg
     2581 ctgttgatgg tgaaggactg gcgctgattt tcgagcacgc ccttggcctg gtcaacgttg
     2641 gcctggccga gcgcggtgcg cacatcttca aggctcagat tgtaagaagc cagcgctcgc
     2701 ggattggcct gaatgcgaac cgccggacgc tggcctccgg agatggagac catgccgacg
     2761 ccggagagct gcgagatttt ctgggccagc gtagtgtctg ccaggtcttc aacgcgagta
     2821 agcggcaggc tgtctgacgt gagcgccagc gtgatgatgg gcgcgtcagc cggattaact
     2881 ttgctata
//
LOCUS       DASQYP010000393         9246 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_100210, whole genome shotgun sequence.
ACCESSION   DASQYP010000393 DASQYP010000000
VERSION     DASQYP010000393.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 9246)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9246)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9246
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_100210"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..314
                     /locus_tag="VE783_12770"
     CDS             <1..314
                     /locus_tag="VE783_12770"
                     /inference="COORDINATES: protein motif:HMM:NF013866.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="prolyl oligopeptidase family serine peptidase"
                     /protein_id="HYX54321.1"
                     /translation="YLSLALATRNSRIAAVAELFGGLAEHFIADAAKLPPVLILHGER
                     DPVVPVDEAYKLEELLKKHSVPYDIKIYRDQGHSLTGLAQLDAMRRIASFFRQHLRQA
                     A"
     gene            complement(317..2602)
                     /locus_tag="VE783_12775"
     CDS             complement(317..2602)
                     /locus_tag="VE783_12775"
                     /inference="COORDINATES: protein motif:HMM:NF012711.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HYX54322.1"
                     /translation="MSSPGTIHEGAPPRQPALVRLITALPSWGLHFLLWVLSRIIYRI
                     KVLGQENIPREGGALLVSNHMSFVDVVLISAAANRPIRFLIFKEVYDLAFIKPFAVLM
                     RAIPVPNEMRPRDLITAFRTATDAIRTGELVCVFGEGQITRTGQMLPFRKGMERIIRG
                     VSAPIIPVNLHGLWGSIFSFERERFLWKAPRRMPYPVTVSFGKWLPATASAIEVRHAV
                     QDLHAAAFAADRTPSQTLDRALIKTARRHPRRFCMGDARFPQVSFMGMLLKLIFVTRR
                     LAPLWKGQEMVGILLPPSVGGALVNFAAALLGKVAVNLNYTASTEVLEAGSRQCNLQT
                     VITSKQFLEKLAKVNNIDVPAKSVFLEDVLAGPRIQEKVLALMMALLLPYGLLKRALG
                     GARRTTDDVATIIFSSGSTGDPKGVMLTHNNVLANIRQMTQVFSFTPEDKIMGILPFF
                     HAFGYTVTLWLTATYGVGVVFHPSPLDAHIVGELTRKYQVTFLISTPTFLQAYMRRIP
                     REEFASMRCVLVGAEKLSERVAHAFEEHFGIRPLEGYGCTECSPVVAVNIFDFRGPGI
                     HQVGGRLGTIGQPLPGVTVRIVDPDTGKPLPLNTPGMLLVRGPNVMQGYLQRPDKTAE
                     VLHDGWYTTGDIAAEQEDGFLTITDRLSRFSKIGGEMVPHIRVEDKLHELAGTSDQVF
                     VVSAVRDEKKGERLIVLHTLDDEQLAPVLEKLGSSDLPALWRPKKDQFFRVMSLPYLG
                     TGKLDLRALKSKALEVAAVPV"
     gene            complement(2818..3405)
                     /gene="frr"
                     /locus_tag="VE783_12780"
     CDS             complement(2818..3405)
                     /gene="frr"
                     /locus_tag="VE783_12780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017978416.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0008135 - translation factor activity, RNA
                     binding [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome recycling factor"
                     /protein_id="HYX54323.1"
                     /translation="MAQSAMAAIAALKDTYVQLKTRMDKAVEDFRTNLAAARTGRASI
                     HMLDTVRVPYYGSEMPLNQVGTVHAPEPQLLTVQPYDPSIMGEIEKSIRSAGLGLNPQ
                     NDGKMIRIPVPPLTEERRREMVKHLHKILEDHRTAVRNVRRDGNEAIKKAMKDKKITE
                     DDEKKALDEIQKLTDAEIKKMEEMSAAKEKELMTV"
     gene            complement(3512..4291)
                     /locus_tag="VE783_12785"
     CDS             complement(3512..4291)
                     /locus_tag="VE783_12785"
                     /inference="COORDINATES: protein motif:HMM:NF013397.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015499 - formate transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015724 - formate transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="formate/nitrite transporter family protein"
                     /protein_id="HYX54324.1"
                     /translation="MQESTRRSAHEIFEEVSANAREELSRSSLALMFSGLAGGISMGL
                     TGLGVALALSYLGDGPIQQFVAFIFYPIGFIVVVIGRAQLFTENTLYPVVLVLDERKH
                     LLNTLRLWAVVFTSNVAGAVFFGWLVMKTGALPPNFADALAGLGVHAAEGHFTLIFAK
                     GVIGGWLIALVAWMVTASHWTIGQIAVTWMLTFIVGAGHFSHCIASSAEIVAAIMSGH
                     LHFGQYFAWLLPATLGNITGGVAIVTLLNYGQVRLGGNEES"
     gene            4578..4952
                     /locus_tag="VE783_12790"
     CDS             4578..4952
                     /locus_tag="VE783_12790"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX54325.1"
                     /translation="MKPPNILWIGKLLESESLAASLEFAGYHVHRESDYQQGLQTLRS
                     IRIDLIVLEHEVSCVQGELVAVRLRSAAPRVPVLLLCRPEDPVNQQVLFVNKILSLGD
                     PEETLLNAVTELLPRRIEQTGT"
     gene            complement(4965..5702)
                     /gene="modA"
                     /locus_tag="VE783_12795"
     CDS             complement(4965..5702)
                     /gene="modA"
                     /locus_tag="VE783_12795"
                     /inference="COORDINATES: protein motif:HMM:NF024921.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009897 - external side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0015412 - ABC-type molybdate transporter
                     activity [Evidence IEA];
                     GO_function: GO:0030973 - molybdate ion binding [Evidence
                     IEA];
                     GO_process: GO:0015689 - molybdate ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdate ABC transporter substrate-binding
                     protein"
                     /protein_id="HYX54326.1"
                     /translation="MISALVPLRSQEVTIAAASDLQFVLPEMAARFERQTGIKVKLSF
                     GSSGNFYSQIQNGAPFDLFFSADANYPRSLETDGLVVPGTVYDYAVGKLVLWVPHGSK
                     LKIEDGLRCLLAPEVARIAIANPAHAPYGRAAQSALRNSGLAEKLKHKLILGENISQT
                     AQFVQTGSAEAGFLALALALSPNLKNAGRFVPVDSKLYPPLLQSAALLKAAREKQAAR
                     KFLKFVSNPEGKGLLRQYGFEIPAENR"
     gene            complement(5817..6875)
                     /locus_tag="VE783_12800"
     CDS             complement(5817..6875)
                     /locus_tag="VE783_12800"
                     /inference="COORDINATES: protein motif:HMM:NF013740.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:1905887 - autoinducer AI-2 transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HYX54327.1"
                     /translation="MKFFDRKTAQALFTALVFALVLLFLYAAWRAIIAFLFAIFFAYL
                     LEAPVSYFEKLLRGSRGAAIAAVYAIVIAGLVVLFALVGSNAIGQAQTLAKQAPELAT
                     RLKSGVLVQQIAERRGWGPQTAQTIQAYINQHAGDLGSGAQSLVLRGAKSVESNWWLI
                     LVPILAVFFLKDGRRFANTIICSVEDIENRRIVATVVEEMNLMLGHFIRVQLILAALA
                     MLVITLFLVIARVPYALPLGLSAGALEFIPVAGPVMGGIAVALVALLAGYPHVIWIVV
                     FLLVWRCIQDYVTSPRIMGTTLELHPLLVLFGVFAGGEVAGVIGVFLSIPVLATLRIF
                     WRAGQLLYKRGRRVEVPV"
     gene            complement(6948..7436)
                     /locus_tag="VE783_12805"
     CDS             complement(6948..7436)
                     /locus_tag="VE783_12805"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HYX54328.1"
                     /translation="MSDQPSSSAVQDPTRQPILLVEDEFTDARLLMRAFQKAGVQNPI
                     THLDTGDKALAYLQGIFPYESRSQHPLPMLVLLDLKLPGMSGLELLRWIRTQRPLRRI
                     PVLILTSESDEHFMESAYDAGANSYLRKSFEPAEIERVVQLIINYWLNLNESPLVLNR
                     AG"
     gene            7651..7899
                     /locus_tag="VE783_12810"
     CDS             7651..7899
                     /locus_tag="VE783_12810"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX54329.1"
                     /translation="MARKKENPALDQDLSKELWISPRFTLKGQSGDRAWDHRQIASPG
                     SARFLELADVALGVKKHENRRKKSAGPNHNGSSRHRQD"
     gene            7925..8743
                     /gene="mutM"
                     /locus_tag="VE783_12815"
     CDS             7925..8743
                     /gene="mutM"
                     /locus_tag="VE783_12815"
                     /EC_number="3.2.2.23"
                     /EC_number="4.2.99.18"
                     /inference="COORDINATES: protein motif:HMM:NF002211.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0003684 - damaged DNA binding [Evidence
                     IEA];
                     GO_function: GO:0003906 - DNA-(apurinic or apyrimidinic
                     site) endonuclease activity [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0008534 - oxidized purine nucleobase
                     lesion DNA N-glycosylase activity [Evidence IEA];
                     GO_function: GO:0016799 - hydrolase activity, hydrolyzing
                     N-glycosyl compounds [Evidence IEA];
                     GO_function: GO:0019104 - DNA N-glycosylase activity
                     [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006284 - base-excision repair [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional DNA-formamidopyrimidine
                     glycosylase/DNA-(apurinic or apyrimidinic site) lyase"
                     /protein_id="HYX54330.1"
                     /translation="MPELPEVETIANGLNKRVAGDRIESVWVGSKKEPLKSPAAAIVR
                     TLEQSGITRVRRVGKHIVFDLTPKSGHGNDEAQWIVHLGMTGKMLVASPELAPEKHTH
                     LVARLASGRELRFVDPRRFGRLEVVKKPFTGPGAEPLTISEEDFARLFHKSKAPIKAA
                     LLNQKFLHGVGNIYADESLFRARVRPKRRANTLTRLELKKLHHGLQEVLREAITAGGS
                     SVSDYVDPDGEPGFFQLQHRAYGREGEPCLICKTPIKKIVLGGRGTHYCPKCQK"
     gene            complement(8800..>9246)
                     /locus_tag="VE783_12820"
     CDS             complement(8800..>9246)
                     /locus_tag="VE783_12820"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HYX54331.1"
                     /translation="VYAARAVLPQMLERKQGYLVQTVSAAGLLTQIGSAPYSVTKHAA
                     LSFAEWLSITYGDQGLRVSALCPQGVKTNMLYRAEFAGGAFLLETAIEPEQVASAVVA
                     AMAEEKFLILPHPEVAKYFLNKASDYERWLRGLRKLQASTQILGAK"
BASE COUNT         2108 a         2662 c         2593 g         1883 t
ORIGIN      
        1 cgtacctctc gctcgctctg gcaacgcgca attctcgcat tgctgccgtg gcggaactat
       61 tcggcgggct ggcggaacac ttcatagctg acgcggcgaa actcccgccg gtgctgattt
      121 tgcacggaga acgcgatcca gtggttccgg ttgatgaggc gtacaagctg gaagagctgt
      181 tgaagaagca ctctgtgccc tatgacatca agatttaccg agatcagggc cacagtctta
      241 ccggtctcgc acagctcgac gcgatgcgca ggatcgcgag cttcttccgg cagcatttaa
      301 ggcaggctgc ttaaattcag acaggtaccg ctgcaacttc cagcgctttt gacttaagtg
      361 cgcgcagatc aagtttgccg gtaccgagat acggcaggct cataactcgg aagaactgat
      421 ccttcttcgg tctccagagc gcaggcagat cagaggaacc cagcttctcc agcactggcg
      481 ccaactgctc gtcatcgagc gtatgtagaa cgatgaggcg ctcgcctttc ttctcgtcgc
      541 ggacagcaga cactacaaac acctgatcgg aagttccagc cagctcgtgc agcttatctt
      601 ccacacggat gtgcggcacc atctcgccgc cgattttgct gaagcggctg aggcggtcag
      661 taatggtgag aaatccatct tcctgttctg cggcgatgtc tccggtcgtg taccagccgt
      721 cgtgtagcac ttctgccgtt ttgtcgggac gctgtaaata gccctgcatc acgttaggtc
      781 cgcggaccag cagcatcccc ggcgtgttca gcggcagagg cttacccgta tcggggtcca
      841 cgatgcgcac cgtgaccccc ggcagaggct gcccgattgt gccaaggcgt cctccaacct
      901 gatggatacc ggggccgcgg aagtcgaaaa tgtttaccgc gacaaccgga gaacactccg
      961 tgcaaccata accttccagc ggccggattc caaagtgctc ttcaaaggca tgcgctacgc
     1021 gctcagaaag cttttctgct cccaccagca cgcacctcat gctggcaaac tcttcgcgcg
     1081 gaattcggcg catgtacgcc tgcaggaatg taggcgtcga gatgagaaag gtcacctggt
     1141 atttgcgcgt gagttcgccc acgatgtgcg catccagcgg gctgggatgg aataccacgc
     1201 ccactccata agtcgcggta agccacagcg tcaccgtgta accgaacgca tggaagaatg
     1261 gcagtatgcc catgatcttg tcttccggcg tgaaggaaaa aacctgggtc atctgtcgga
     1321 tgttggccag cacgttgttg tgcgtgagca tcacgccttt gggatcaccg gtgctgccgc
     1381 tggaaaagat gatggtcgct acatcgtcgg tcgtgcgacg tgctccaccc aaagctcgct
     1441 tgagcagccc gtacggcagc agtagcgcca tcatcagcgc aagaaccttt tcctggatgc
     1501 gtggccccgc aagcacgtct tccagaaaaa ccgattttgc cggcacatct atgttgttta
     1561 ctttggcgag tttctccagg aactgttttg aagtgatcac cgtctgaaga ttgcactgcc
     1621 gggagccggc ctccagcacc tccgtactcg ccgtgtaatt caggttgaca gccactttac
     1681 ccaacagagc ggccgcgaag ttcaccagcg ctccgcctac agacggcggc agcagtatgc
     1741 cgaccatctc ctgacctttc cacagcgggg ccagccttcg ggtaacgaag atgagcttca
     1801 gcagcatgcc catgaagctg acttgcggga agcgcgcatc tcccatgcag aagcggcgcg
     1861 gatggcgccg agcagtcttg atcaatgcac ggtcaagcgt ttgcgacggc gtacgatcag
     1921 cggcgaaagc ggcggcgtgc aaatcctgta ctgcatggcg gacctcaatt gcagatgcgg
     1981 tggcaggcag ccatttaccg aagctcaccg tcactgggta tggcatgcgt cgcggagcct
     2041 tccagaggaa gcgctcgcgc tcaaagctga agatgctccc ccagagtcca tgcaggttca
     2101 ctggaatgat gggcgcgctc acgccacgga tgatccgctc catgcctttg cggaacggga
     2161 gcatctgccc ggttcgtgtg atctgtcctt ctccgaacac gcaaacaagc tcgccggtcc
     2221 ggattgcatc agtggctgtt cggaacgcgg tgatcaggtc gcgcgggcgc atttcattgg
     2281 gaacgggaat ggcgcgcatc agcaccgcaa acggcttgat gaacgcaaga tcgtaaactt
     2341 ccttgaagat cagaaagcgg attggacgat tcgcggcagc gctgatcagt accacatcca
     2401 caaatgacat gtggttggaa accagcaacg cgccgccctc gcgcggaatg ttttcttgcc
     2461 ccaggacctt gatgcgatag atgatgcggc tcagtaccca gagcaggaaa tgcaatcccc
     2521 agctcgggag agcagtgatc aggcgaacca gagcaggctg gcgtggaggt gcgccctcat
     2581 gaattgtgcc tgggctcgac atcggagctg ccttcgaggt tttccgctgt atataggatg
     2641 ctgggccggg atattcttgc acccttagag ctgcttgtaa acctcataaa agtgctcacc
     2701 ttggaggcca aagaagccga ttcgtgcgtt caacatcaga acctaaacgc ggttcaccag
     2761 gactcttttt aaaaaagaaa agcccggccg cggccaggct cgttccacac gaaattgtca
     2821 gaccgtcatc agctcttttt ctttcgccgc cgacatctct tccatcttct tgatctcggc
     2881 gtcggtcagc ttctggattt cgtccagtgc ctttttctcg tcgtcctcgg tgattttttt
     2941 gtccttcatc gctttcttga tcgcttcatt gccgtcgcgg cggacattgc ggacagcagt
     3001 gcgatggtct tcaaggattt tgtgcaggtg cttcaccatc tcacgccggc gctcctcggt
     3061 gagcggaggc acagggatac ggatcatctt gccgtcgttc tgaggattca ggcccagtcc
     3121 ggctgagcga atggattttt cgatttcccc catgatgctg ggatcgtacg gctgaactgt
     3181 caatagttgc ggctccggtg cgtgtaccgt gccaacctgg ttcagcggca tttccgagcc
     3241 gtaatacgga actcgcacgg tgtccagcat gtggattgaa gcacgccctg tgcgcgcggc
     3301 ggcaaggttg gtgcgaaaat cctccaccgc tttatccatg cgggttttaa gctggacgta
     3361 agtgtctttc agggcggcaa ttgccgccat cgcagattgc gccatacgaa tgcctcagaa
     3421 aagaagtagc aaaacgtacg attataacgt gcgcagccga gcagggagca agcggaggag
     3481 tgcgcgcatg aggcaacatc atttcaaacc gtcaggactc ttcgttcccg ccgagccgta
     3541 cctgcccgta gttcagcagc gtgacaatcg ctacaccgcc ggtaatgttg cccagcgtgg
     3601 ccggaagcag ccatgcgaaa tactgcccaa aatgaagatg gccggacatg attgcggcaa
     3661 caatctccgc actgcttgca atgcagtggg agaaatgtcc cgcacctacg atgaacgtca
     3721 gcatccaggt aaccgcaatt tgcccaatgg tccagtggct cgccgttacc atccacgcga
     3781 ccagagcgat gagccaacca ccaatcaccc ctttggcgaa gatcaaggta aagtggccct
     3841 cggcggcgtg aactcccaga ccggcaagcg cgtccgcgaa gttcggcggc agcgcgccag
     3901 tcttcatgac cagccagcca aagaacaccg cgcccgcaac attcgacgta aagacgaccg
     3961 cccacagccg cagggtattc agcaagtgct tgcgttcatc cagcaccagg acaaccggat
     4021 acaaggtgtt ttcggtaaat aactgggcgc gtccaatgac taccacaatg aaaccaattg
     4081 ggtaaaaaat gaacgccacg aactgctgaa tggggccatc gcccagatag ctcagggcca
     4141 acgccacccc caggcccgtc agccccatgc tgatcccgcc tgccaggccg gaaaacatca
     4201 gcgcaaggga gctgcggctc agctcttcac gagcattggc gcttacttct tcaaagatct
     4261 catgcgcact gcggcgcgtg ctttcctgca taatgtcctg tgcgcgaata ggatgcgcaa
     4321 cttacgcgtg gttatggctg cacctgctgt ctttcgggtt gataaattca ttggctttta
     4381 accacgcgct gggtggaaac agctataact gcagaaacgt gattgaatgc ctcactgctc
     4441 gataggggct ccgcacctca acgatcccgg agccccttga cctttatcct ccagaacagc
     4501 tgcacgatcc tttgatacca aagcaactca aacgctcccg tagtactcag tacaaatgtg
     4561 cagtaaacaa cagagtcatg aaaccgccaa acatcctctg gattggaaaa ctgctggaat
     4621 ctgaatcgct ggcagcgagc cttgaattcg ccgggtatca cgtccaccgc gaaagcgatt
     4681 accagcaggg tctgcagact ctgcgcagca tccgcataga tctgatcgtc ctggaacacg
     4741 aagtctcgtg cgtccaggga gagcttgttg cggtgcgcct gcgaagtgcg gcgccaagag
     4801 ttcctgttct cctgctatgc cggccggaag atcctgtcaa ccagcaggtg cttttcgtta
     4861 ataagatcct gagcctcggc gatccggagg aaaccctgct caatgccgtt acagagttgc
     4921 tgccgcgccg cattgaacag accggtacct gaggcggctg gccgctatcg gttttcagcc
     4981 gggatttcga acccgtactg ccggagcaga cccttccctt cagggttgct cacaaacttc
     5041 agaaatttac gtgcagcctg cttctctcgc gcagctttga gcagtgctgc ggactgcaat
     5101 agcggcgggt acagcttgga atctaccggc acaaacctgc cagcattctt cagattcggc
     5161 gatagcgcca gcgccaacgc cagaaagcca gcttcagcgc tgccggtctg aacgaattgc
     5221 gctgtctgcg agatgttctc gcccaaaatc agcttgtgct tcagcttctc cgccaaccct
     5281 gagttccgca acgcgctctg ggcggcgcgg ccgtatggcg catgggcagg gttggcaatg
     5341 gcaatccgcg ccacctcagg agctaacagg caccttaaac catcttcaat ctttagcttc
     5401 gagccatgcg gcacccagag cacaagctta cccacggcgt agtcatagac cgtaccgggc
     5461 accactagtc cgtccgtttc aaggcttcgg gggtaattcg catctgcgga aaagaagaga
     5521 tcaaagggag cgccattctg aatttgcgaa tagaagttgc ctgacgaacc aaatgagagc
     5581 tttaccttga ttccggtctg gcgttcgaag cgcgcagcca tctcaggtag cacgaactga
     5641 aggtcagaag cggcggcaat ggtcacttct tgcgagcgca gcgggacgag agccgaaatc
     5701 atgagcagtg ctgctatcgc gactttctta ggcatatagt cagagtaatg gcagcttccg
     5761 gcttaacgtc aaatcggcag tgccgaatat atgcgactgg ctgcgctttc gcgccgtcag
     5821 accggcactt ctacgcggcg tccgcgttta tagagcagtt ggcccgcgcg ccagaatatc
     5881 cgcagagtgg cgagaacagg gatggagaga aacacaccga tcacccccgc aacttcccca
     5941 ccagcaaaca cgccgaacag caccaagaga ggatggagtt ccagagttgt acccatgatg
     6001 cgaggcgagg tgacgtagtc ctggatacag cgccagacca gcaggaacac cacaatccag
     6061 atcacgtgcg gatatccggc cagaagcgcc acaagcgcca ctgcgatacc tcccatgacc
     6121 ggacccgcca ctggaatgaa ttccagggca ccagcggaga gaccgagtgg caatgcatag
     6181 gggacgcggg caatcacaag aaacaacgtg attacgagca tggccagcgc cgccagaatg
     6241 agctgcaccc ggatgaagtg gccgagcatc aggttcatct cttccaccac agtggcgacg
     6301 atcctgcggt tctcaatgtc ctcgacggag caaatgatcg tgttcgcaaa tcttcggccg
     6361 tctttcaaga agaagaccgc gagtatcgga acaaggatga gccaccagtt gctttcaaca
     6421 ctttttgcac cacgcagaac caggctctgg gcaccggatc caaggtcccc ggcgtgctga
     6481 ttgatgtaag cctgaatggt ctgtgccgtt tgcggacccc agccgcgccg ttccgcaatc
     6541 tgctggacca ggactccgct cttcaggcgc gtggcgagtt ctggagcctg tttggccagc
     6601 gtctgtgcct gcccaatggc gttggagcct accagggcga acagcaccac caaaccggct
     6661 ataacaattg cataaaccgc cgcgatcgct gcgccacgag agccgcgcag cagcttctcg
     6721 aaatacgaaa ccggcgcttc cagcagatac gcaaagaaaa ttgcgaacag aaaggcaatg
     6781 attgcgcgcc atgccgcata caggaacagc agcaccagcg caaacaccag agcggtgaag
     6841 agggcctgag cagtcttccg gtcaaagaat ttcaatgggg gatgtctccg gtaaattgtg
     6901 gcccgtgatc agcttaaacg attggatgcc agcccggaac gggagtttca tcccgcccgg
     6961 ttgaggacca gcggcgactc gttcaggttc agccagtaat tgatgatcag ctgcaccacg
     7021 cgctcgattt ccgcgggttc gaaggatttg cggagatacg agttggcgcc tgcatcatag
     7081 gcggactcca taaaatgttc gtcactctct gacgtaagga tcagtaccgg aattctgcgc
     7141 aagggccgct gcgtccggat ccagcgcagc agctcgagtc ctgacatgcc gggcagcttc
     7201 agatcgagca ggaccagcat cgggagtgga tgctgagagc ggctttcata ggggaagatg
     7261 ccctgcagat aggccagagc tttgtctcct gtgtccagat gagtgatggg attctggact
     7321 cctgcttttt ggaacgcccg catgagcagg cgtgcgtcgg taaactcgtc ctccaccagc
     7381 aggattggct gccgggttgg atcctgaaca gcactgcttg aaggttgatc gctcaatcta
     7441 tgatcctgga aataaggtga tggcaacgcg tcccgattat tttagggctt tttggggatc
     7501 aagtgcggtg aatttgggcc ggcacgagcc ggccattacc attccttgcc gctatcagcg
     7561 aattttgagt cctagagcct tacctgctgc aacgctgaag gagattttga gcatcagttc
     7621 tgacaggatt agggtaaaat tacgccaccg gtggccagga aaaaggaaaa tcccgctttg
     7681 gaccaggacc tctccaagga gttgtggatt tcgccccggt tcacactcaa gggccaaagc
     7741 ggagaccgcg cctgggacca tcggcagatc gcgagcccgg gaagcgcccg ttttttggag
     7801 ctggctgacg tcgctctcgg agtaaagaag cacgaaaacc ggcgcaagaa atccgcaggc
     7861 cccaatcaca acggctccag ccgccaccgc caggactaac tcccacctga gataatgggc
     7921 atccatgccc gaactgcccg aagttgagac aattgcaaac ggcctgaaca agcgtgtggc
     7981 tggcgaccgc attgaatccg tgtgggtggg cagcaaaaag gagccgctga agtctccagc
     8041 tgccgccatc gtgcgcaccc tggagcagtc tggaattacg cgcgtccggc gcgtaggcaa
     8101 gcacattgtt ttcgatctca ctcccaagag cggccatggc aatgatgaag cccagtggat
     8161 cgtgcatctg ggaatgacgg gaaaaatgct ggtcgcttca ccggaacttg caccggaaaa
     8221 gcatacgcat ttggtcgccc gtctggcttc gggccgcgaa ttgaggtttg ttgatccacg
     8281 gcgcttcggc aggctcgagg tagtcaaaaa accgtttacc ggaccagggg cggaacccct
     8341 cacaatctca gaagaagatt tcgcgcggct cttccacaag agcaaagcgc cgatcaaggc
     8401 agcgctattg aaccagaaat ttctgcatgg cgttggaaac atctatgcag atgaaagcct
     8461 gtttcgcgcc agagtgaggc caaagcggcg ggccaacact ttgaccaggc tggagcttaa
     8521 aaaactccac cacggcttac aagaagtgct gcgcgaggca atcaccgccg gcggctcgtc
     8581 cgtttcagac tatgttgacc ccgacggcga gccgggattc tttcagcttc aacatcgagc
     8641 ttacggacga gaaggcgagc cgtgcctgat atgcaagaca ccaatcaaga aaatagtgct
     8701 tggcggacgc gggacacatt actgtcccaa atgccagaaa tgaaagaaag cggctggttt
     8761 ccagtatctt tgcgggattg ctgctggtaa ttcgaatggc tatttggctc ccaatatctg
     8821 cgtgctcgcc tgcagctttc gcagcccgcg cagccagcgc tcgtaatcac ttgccttgtt
     8881 caggaaatac ttggccacct cgggatgagg caggatcagg aatttctctt ccgccatggc
     8941 ggccacaacg gcgctggcaa cttgttcagg ctcgatcgcc gtctccagca ggaaggctcc
     9001 accggcgaat tcggcgcgat aaagcatgtt tgtcttcacg ccttgcgggc acagggctga
     9061 aacacgcaat ccctgatctc cgtaggtgat ggaaagccat tcggcaaagc tgagagcagc
     9121 atgcttggtt acagagtatg gcgctgagcc gatctgggtc agcagaccgg cagcagacac
     9181 ggtctggacg aggtagcctt gcttgcgttc gagcatctga ggaagcaccg cgcgcgcagc
     9241 gtaaac
//
LOCUS       DASQYP010000394        13127 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_20788, whole genome shotgun sequence.
ACCESSION   DASQYP010000394 DASQYP010000000
VERSION     DASQYP010000394.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 13127)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13127)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13127
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_20788"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1947)
                     /locus_tag="VE783_12825"
     CDS             complement(<1..1947)
                     /locus_tag="VE783_12825"
                     /inference="COORDINATES: protein motif:HMM:NF016101.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016788 - hydrolase activity, acting on
                     ester bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alkaline phosphatase family protein"
                     /protein_id="HYX54332.1"
                     /translation="MLFTSIARKLQLRPMLATGLILLQVFSPIAWAEDRDAKRAEETK
                     TATPIKHLIVIIGENRTFDNIFATYVPKHGTVSNLLSKGIIHEDGSPGPNAALAQQFQ
                     IANINPPTFFVDTRTLINPGKTAYSPFLPTPEAGGAPPAAVTRPQFLKDPADAAPPFD
                     AKTFSTGQLGTLSPEIETEDLFLLTTGATGLKNCNPDPTLPPFACAEPDTRIANFNKL
                     PNAPFQITSAKVPYDSYTGDMVHRLFHMWQQSDCSVLDATPQNPSGCKNDLLPFVGIA
                     RGDDSGSNSMGFYNMQRGDAPLLKRLADEFTMSDNYHQPAMGGTAAQHTMIGTADSLP
                     WEKVGNFPAQPPAAQVANPNPKSATNAAFINDRRWTECGDPTQPGIAPIMNYLKTLPW
                     RPDLTASNCAPNTFYMINNLRPGFLSNGQLNMAAINAGTAAPPSSLRTIGDALNEKGI
                     SWAFYGGGFNAARRFDNGSTDPVDVLIGTGGDWYCDICNPFQYASSIMGDPAQRAAHI
                     KDAVDFFDGLDRGELPAVAYLKPDSFGDGHPASSKLDIFESIVERVLDGLKRHHDLAE
                     ETAFIVTFDEGGGYYDSGFMQPLDFFGDGPRIPLIIVSPFTRGGHISHTYTDHVSILK
                     FIERNWGLKPLTHRSRDNFPNPISF"
     gene            2274..2534
                     /locus_tag="VE783_12830"
     CDS             2274..2534
                     /locus_tag="VE783_12830"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX54333.1"
                     /translation="MRGDFSLAIIGYSIPSREKRRIWAELVTSCPHAPVLELFRGSAP
                     DLPDAQFYLNAQLGVEAIPRKVQEILKSGDGNVPGSPAGAVF"
     gene            2643..3068
                     /locus_tag="VE783_12835"
     CDS             2643..3068
                     /locus_tag="VE783_12835"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX54334.1"
                     /translation="MANRSLADVGGTPGGLGSFFMGFVMTCVGGYLISNQVSVVGSYW
                     SFWGFNSFGITLLPMLFGIGILFFSGRSTIGWLLTIGGALFILAGVIANMHIYFRPTS
                     LFNTVVMLVLLVGGLGLIARSMRSHPGSGQPEKEKSQSA"
     gene            complement(3090..3443)
                     /locus_tag="VE783_12840"
     CDS             complement(3090..3443)
                     /locus_tag="VE783_12840"
                     /inference="COORDINATES: protein motif:HMM:NF017007.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TM2 domain-containing protein"
                     /protein_id="HYX54335.1"
                     /translation="MATVFCTSCGKQTDDAAAFCSSCGARVSGQPATAITSAVAAPMV
                     PYQVTDKRILPAFLLCFFLGVFGVHRFYVGKVGTGIAQLFTIGGLGIWALVDLIMIIT
                     GSFTDKQGNKITQWT"
     gene            complement(3532..4854)
                     /locus_tag="VE783_12845"
     CDS             complement(3532..4854)
                     /locus_tag="VE783_12845"
                     /inference="COORDINATES: protein motif:HMM:NF012428.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate aminotransferase family protein"
                     /protein_id="HYX54336.1"
                     /translation="MTKEEILKKHKQYLFPSVSTYYSEPLVTDHASMQYLWDADGKKY
                     LDFFGGIVTISVGHCNPRVADKVKAQVDRLQHASTMFPNEAIVALAEKLAQITPGEIS
                     QSYLTNSGTEANETAIQLARVFTGNYEVVALRHGYSGRSQTAQSLTGHGTWRKSLNVP
                     SAGVVHAINPYCYRCPLGKTYPSCEVACAKDVEAVIQTTTSGQIAAFLAEPIQGVGGF
                     ITPPPEYFKIVFKIVKNYGGLFIADEVQTAWGRTGKRWFGIEQWEVTPDIITSAKGLA
                     NGAPVGVTMTRPEISASFKGLQISTFGGNPVTSVAAKATIDLIEQDRLMDNAHTVGSY
                     YRDGLESLKEKYEPIGDVRGMGLMQALEFVKDRVTKEPSPEATNRFMEECRKRGLLIG
                     KGGLFGNVVRTSPPLNITKADVDEAIRIMDEALMVMSPAAVGAGSARG"
     gene            complement(5007..5411)
                     /locus_tag="VE783_12850"
     CDS             complement(5007..5411)
                     /locus_tag="VE783_12850"
                     /inference="COORDINATES: protein motif:HMM:NF025279.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peroxiredoxin-like family protein"
                     /protein_id="HYX54337.1"
                     /translation="MFCREHVAQLREHEQEIRSKGGKIVAVGLGDASYAKHFREQTGI
                     DFPLLIDENRQAYSTVGLHKANIFHLLRGDNMKARKRAKAIGVRQHRLGKDPFQLGGS
                     FVFAPGNVDKFVHVSETFGDNAQPEQLVKALG"
     gene            complement(5412..5549)
                     /locus_tag="VE783_12855"
     CDS             complement(5412..5549)
                     /locus_tag="VE783_12855"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX54338.1"
                     /translation="MCAVPESYSSKLANITLPDVDGKAVKLGSFWSDSPAVVVFLRHY
                     G"
     gene            5667..6512
                     /locus_tag="VE783_12860"
     CDS             5667..6512
                     /locus_tag="VE783_12860"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HYX54339.1"
                     /translation="MQINNSVAVITGAGSGIGRALAIQCAQKGAQLALADANRETLDE
                     TFRLLGKAPARTYLVDVGDASAMQNFAGDVQRDFGRASLLINNAGVALYGTFAELTLQ
                     EFEWLFRINFWGVIHGCKFFLPILQQEKQSRIVNISSVFGLIGPPGQTPYASSKFAVR
                     GFSESLRGELRATSVGVTCVHPGGIRTNIANNGRAGSSTDPQGQQEARALFNKIAHST
                     PEYAAHVIISGIEKNKDRVLIGKDAYQIDRTARLFPNRAGTIFANYLEKRRAKVVKSL
                     PAAAK"
     gene            6599..7339
                     /locus_tag="VE783_12865"
     CDS             6599..7339
                     /locus_tag="VE783_12865"
                     /inference="COORDINATES: protein motif:HMM:NF033196.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HYX54340.1"
                     /translation="MSCRFLPAVLALVLFPLAARAQQPEPLKNLQYFPKDTTRDDLMQ
                     TMRGFSFALGVRCEYCHMAKDGAPPQERNFASDEKQTKRTARAMLRMVDSINQQYISK
                     LESKAEHKVECATCHHRLSKPVTMNALLADTMEKQDLAAAITLYRDLRARVYGGGQYD
                     FGETPLNILTESLLRQKKTKEAAAIMELNVEVNQPPSMWASNLLAMAHTANKETEKAK
                     ADYQKILQRDPNNAFAKKQLEQLNSTVQ"
     gene            7466..9733
                     /locus_tag="VE783_12870"
     CDS             7466..9733
                     /locus_tag="VE783_12870"
                     /inference="COORDINATES: protein motif:HMM:NF012801.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HYX54341.1"
                     /translation="MYQIVSRILIGWLMFLALAAAQDRTRILVVNVRDQTGSPVMGAH
                     VSLEGSGYSQTAIPVDDGLYELMRIPVRQSLTLNVTARGFANFDRTIAPQDSNVQVTL
                     LPAIIAQQVTVTANRYETRMEETAENVDVLSRAALSTTAAESIDDALRQIPGFTLFRR
                     SGSRTANPTTQGPSLRGVGTSGASRALVLYNDIPLNDPFGGWVYWGRIPREDVESIEV
                     LHGGASSLYGSGALAGVVNVVPEHEQRTLFSSEFSGGSEGTPDFSALASIKLGKWTWA
                     ETGEFFRTSGYVLVPEDQRGAIDTAANSLHSSAESMLSRKIGRGDLFFGSSFYRESRQ
                     NGTPLQNNDTDLWQVSTGTNFITRMAAFQARLYGSGQSYNQSFSSIVADRNSESLVRL
                     QHVPAQQAGGSLTASGSLGSRNTWVAGGDTRLVRGFSNETIFTSGTPSSLVSAGGRQL
                     TSGGYVQDQIRLLPRLLLTAGVRYDDWDNFDAHSRTAPLSGTARPGFTGFTDESQHAF
                     SPRASLLWRATHNLALTASAYKSFRAPTLNELYRAFRLGNVLTLANPNLTAERINGAE
                     TGANVSLGRLRLHSTFFYMQVLDPVANVTLTVTPALITRERENLGRTRSRGVESGAEW
                     HASRLSLSAQYQFVDAVVSSFAAEPALVGLDVPQVAPHQFTFTGQYALSSGWLVALQG
                     RASSRQFDDDLNLFPLDSYFQMDAYVSKRLRPGVDAFVAIENLTNSRMMVARTPIVNV
                     GPPLFARAGIKLRFE"
     gene            10089..>13127
                     /locus_tag="VE783_12875"
     CDS             10089..>13127
                     /locus_tag="VE783_12875"
                     /inference="COORDINATES: protein motif:HMM:NF025092.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015267 - channel activity [Evidence IEA];
                     GO_process: GO:0015891 - siderophore transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HYX54342.1"
                     /translation="MKRVIGRTQGFAQEGSMRSFNLCKILFVFLLITGMMHAQGVGAS
                     GELRGTVTDPSGATVSGATVVVTDLGKGTKHTVMTDNDGTFRVPGLLPANYSVAVSKS
                     GFQTEVAKTVTVNIGQTSTVNFPLKVSQVAESVEVTTEAPIVETDRTAQAETINQQYI
                     QDLPINRRDYLTFTLLAPAVSDSTRLSADQDFRVKQTPQSGLSFYGSNGRGNSVTVDG
                     GEANDDSGGVRLNLGQDAVQEFQINRSNYGAELGGASGATINIVSKSGTNNVHGTIFG
                     FFRNDALDAANPFALTQALQPGQVFNPLGPDSTFTHTKDSLSRQQFGGSIGFPITKDK
                     TFFYTAFEGLRSDAQNAVPLLQSTNQLRPSSSPLNNQQAIITGLATLPGNPSVPCLTG
                     QPSLPAATCATILGNVLTVTNLPIAPPTSQYVVNQLESNGGNFPYNTRTYLASARFDH
                     TFSDKNQMFMRYSFGHDVEQNPDVQSLTGFSRGSSVNPAFDNTLQGSWFHQFSAKTQN
                     EARAQYNYSNFDVIPNFTGQVGLDIPGFANLGTNIFIPSKTIMRRYEVGDNLTTIHGK
                     HTLKMGATFLYRGNHTESDTFFPGRFVFGNLPGGLLSPCLQVPAACGLTANPATINSL
                     QSAALGLPQFYQQGFGNPIYNYPRPYTSAYLQDSWAMKPNFTLNVGVRYELDSQYGAL
                     PSDYNNVAPRVAFSWDPFSDHKTVIRAGYGIFYSPIYGQIADVVQTLGFVNNFRQIPQ
                     VFVPLTGAPGNPALNSAVIYQTLFAQGKVQCTSPAAGQQACITPGDLTQFGINITQQG
                     PPPPLSVVFSAQPGYRNPYSQQAEFGIERQIAKDFSVSLSGIYVHTIGLPVAIDVNAL
                     PTTPTRSVPLASGGTATFHNWSAPQCAVLVNNPCFAQPALLQTDQYSSLGASLYEGGI
                     LEAKKRFSSYLQLFGSYTLSKAFDTTTDFNSDFGPQDNTSLAAERALSNFDQRHKVVV
                     AGVVDTGNRGNGSLGKFASGWQFAPIYRFNSGHPFNLLAGA"
BASE COUNT         2711 a         3901 c         3621 g         2894 t
ORIGIN      
        1 aaaagagatt ggattcggga agttgtcgcg gctgcgatgg gtcaacggct tcaatcccca
       61 gttgcgttcg atgaatttga ggatggaaac gtgatccgtg taagtgtggc tgatgtggcc
      121 gccgcgcgta aacggcgaca cgatgatcaa cggaatgcgt ggaccatcgc cgaagaaatc
      181 cagcggctgc atgaacccgg agtcatagta gccgccgcct tcgtcaaagg tcacgatgaa
      241 cgcagtctct tccgccaggt cgtgatggcg cttcaggccg tccagcaccc gctccacaat
      301 cgattcaaaa atatcgagct tcgaactcgc cggatggcca tcgccaaaac tgtccggttt
      361 gagataagcc acggcgggaa gctcgccgcg gtccaggccg tcaaagaaat caaccgcgtc
      421 tttaatgtga gcggcccgct gggcgggatc gcccatgatc gagctggcgt actggaaagg
      481 attgcagata tcgcaatacc agtcgccgcc ggtgccgatc agcacgtcaa ccggatcagt
      541 tgagccgttg tcgaaccggc gtgccgcgtt gaatccgcca ccgtaaaacg cccagctgat
      601 gcctttttcg ttcagcgcat ccccaatcgt gcgcagtgac gatggcggag cggcggtgcc
      661 ggcgttgatc gctgccatgt tgagctgtcc gtttgagagg aagcctggac gcaggttgtt
      721 gatcatgtag aacgtgttag gcgcgcaatt gctcgccgtc aggtccgggc gccagggtag
      781 tgtcttgagg tagttcatga tgggcgcgat gcccggctga gtcggatcgc cgcactctgt
      841 ccagcggcgg tcgttgataa acgcggcatt ggttgcgctc ttgggattgg ggttggccac
      901 ctgtgccgcg ggaggctggg ctgggaagtt gcccaccttt tcccagggca gggaatcagc
      961 cgtgccgatc atggtgtgct gcgctgccgt gccacccatc gccggctggt gatagttgtc
     1021 gctcatcgta aactcatcgg ccagtctctt caaaagcggc gcgtcaccac gctgcatgtt
     1081 gtagaagccc atcgaattgc tgccgctgtc atcgccgcgt gcaattccaa cgaacggcag
     1141 aagatcgttc ttgcagcctg aagggttctg cggcgtagcg tccagcacgc tgcaatccga
     1201 ctgctgccac atgtggaaca accgatgcac catgtccccg gtgtagctgt cgtaaggaac
     1261 tttggcgctc gtaatctgga acggtgcgtt gggtagctta ttgaagttgg caatccgcgt
     1321 gtccggctca gcgcaggcga acggcggcag tgtgggatca ggattgcagt ttttcagccc
     1381 ggttgcgccg gtagtcagca ggaacagatc ttcagtttcg atctccggag agagggtccc
     1441 aagctgtccc gtggaaaagg tcttggcgtc gaacggcggc gccgcatcgg ccgggtcttt
     1501 caggaactgc ggccgcgtaa ccgccgccgg cggcgcgccg cccgcttcgg gagtcgggag
     1561 gaaaggcgag taggcagtct tacccgggtt gatcagcgta cgtgtatcca cgaagaaagt
     1621 cggcggattg atattggcga tctggaactg ctgggccagc gcggcgttcg gccccggcga
     1681 tccatcttcg tgaatgattc ctttggaaag caggttggag actgtcccgt gtttgggaac
     1741 gtacgtggca aaaatattat cgaatgtacg gttttcgccg atgatgacga tcagatgttt
     1801 gatcggtgtc gcagttttgg tttcttcggc acgcttggcg tcgcggtcct cagcccacgc
     1861 gatgggggaa aagacttgca gcaggatgag gccggtggcc agcatcgggc gtagctgcag
     1921 cttcctggcg atcgaggtga acagcatctg ctttcctcca gaatttttta cttcgaggag
     1981 aaaaactagt tttggcatgt gtaggcttca tgattgcggc gttaaggatg agtgaaatgt
     2041 cgttcagtga ccggatgccg ccagacgcgc cgagaccatc ggcgcacgct ttcccaactt
     2101 ttgcatctaa accgcaaaac attcaaaccc cacttatgtc ctcgccacca gcaaacaggc
     2161 tctttatcat ttccagggac cctgagcttg cagaagaaag aagagctctc ctggagcgga
     2221 ctggttatgg cgtagtctcg gctggaaatt tcaaggaagt ccgggaactc tgcatgaggg
     2281 gcgacttcag cctggccatc atcggctact caattccttc ccgagaaaaa cggcggatct
     2341 gggctgaact cgtcaccagc tgtcctcacg cgcctgttct ggagctgttc cggggcagcg
     2401 ctcctgatct gcctgatgcg cagttctacc tgaatgctca actgggagta gaggccatac
     2461 cgcgcaaggt ccaggaaata ctgaaatcgg gggacggcaa tgttccgggt tcgcctgccg
     2521 gcgcagtctt ctgaagtagc gtcagcatgc acgcgctcgc acccccgaga accaggcaga
     2581 tgcagcagct tgcgtcagac ttactttaca ttcctcgtcc gcctcgtgct atgctcctgc
     2641 gcatggcgaa tagatccctt gcagatgttg gcggcacccc cggcgggctg ggctcctttt
     2701 ttatgggctt tgtgatgacc tgcgtaggtg gttatctcat ctcgaaccag gtcagcgttg
     2761 ttggttcgta ctggagcttc tggggattca acagctttgg catcactctg ctgcccatgc
     2821 tcttcggcat cggcattcta ttcttcagcg gacgcagcac catcggttgg cttctcacca
     2881 ttggcggagc actttttatc ctggccggcg tcatcgccaa tatgcacatc tatttccgtc
     2941 ccaccagcct gttcaacacc gtcgtcatgc tggttctgct ggtcggagga ctcgggttga
     3001 ttgcccgctc catgcgttca caccccggct ctgggcagcc ggaaaaagaa aaatcccagt
     3061 cagcctgatg ccctcacggg ctttgtcacc taggtccact gcgtgatctt gtttccctgt
     3121 ttatccgtga agcttccggt gatgatcatg atgagatcaa caagagccca gattccaagg
     3181 cccccgatcg tgaaaagctg agcgatcccc gttcccacct tgcccacata aaagcgatgc
     3241 actccaaaaa ctcccagaaa gaagcacaac aggaaggcag gcagaatccg cttatccgtt
     3301 acctgatacg ggaccatggg ggctgcaacc gctgacgtga tcgcggtagc aggttgtccg
     3361 gagacacggg ctccgcagga agaacaaaat gctgctgcat catcggtctg cttgccgcat
     3421 gaggtgcaga acacagtcgc catttggggg aacgctcctt gaattttgag atatgaggag
     3481 ttttagatac gaagcttaca cttctatcaa aactcgccgg gccattcaac gttacccgcg
     3541 cgcgctgcct gctcccactg ctgccgggga catgaccatc agagcctcgt ccatgatccg
     3601 gattgcctca tccacgtcag ctttggtgat attcagcggc ggagaggtgc gcaccacgtt
     3661 cccaaacagt ccccctttgc cgatgaggag tccgcgtttg cggcactctt ccataaagcg
     3721 gttcgtggcc tccggtgacg gctcttttgt gacgcgatcc ttcacaaact ccagcgcctg
     3781 catcagtccc atcccgcgca cgtcgccaat gggctcgtac ttttccttca gggactccag
     3841 cccatcacga tagtagctgc ccaccgtatg cgcgttatcc atgagccggt cttgttcaat
     3901 caggtcaatc gttgccttgg ccgcgacgct ggtcactgga ttgccgccaa aagttgaaat
     3961 ctgcagcccc ttgaagctgg ctgatatctc cggtcgcgtc atggtcacgc ccaccggcgc
     4021 gccattggcc aggcctttgg cggaggtgat gatgtccggc gtcacttccc attgctcaat
     4081 cccaaaccac cgtttgccgg tgcgtcccca tgccgtttgg acttcgtcgg cgatgaatag
     4141 gccgccgtag tttttcacaa ttttgaaaac gatcttgaag tactccggag gcggagtaat
     4201 gaatccgccc acgccctgaa tgggctcagc caggaacgcc gcgatctgtc ctgacgttgt
     4261 ggtctggatc acagcttcca catctttcgc acacgccacc tcgcagctcg gatacgtctt
     4321 gccaagcggg cagcgatagc aataaggatt gattgcgtgc accaccccgg ccgatggcac
     4381 attcagggac ttgcgccatg tgccgtgccc ggtgagcgat tgcgctgtct gtgaccgccc
     4441 gctgtagccg tgccggagcg caactacttc gtaatttccg gtaaacacgc gcgcaagctg
     4501 gatcgcggtt tcattggcct ccgtgccgct gttcgtcagg tagctctggc tgatctcgcc
     4561 tggagtgatc tgcgccagct tctccgccag ggcaacaatc gcctcattcg ggaacatcgt
     4621 ggaggcatgt tgaagccggt ccacctgcgc cttcaccttg tccgcaacgc ggggattgca
     4681 gtggcccact gagatagtga caatgccgcc gaagaaatcc agatactttt ttccgtccgc
     4741 gtcccacagg tactgcatgc tggcgtgatc tgtgaccagt ggctcactgt aataggtgga
     4801 tacagaaggg aagagatact gcttgtgctt cttgaggatt tcttcttttg tcatcgtcaa
     4861 ccctgcccga aagtgaaaag atgagtgcga ttcgaagcct tcgctgtccc tctcattcta
     4921 gtcccgcaaa agcggccttc aacgcaggaa ttttatccgc gcgctgtgtg accagagtca
     4981 cagcgccgcg agcacacgcg cagtttttat cccagcgctt ttaccagctg ctcgggctgc
     5041 gcgttgtcgc caaaggtctc gctcacgtgg acaaatttgt ccacatttcc aggtgcaaaa
     5101 acaaagctgc cgcccaactg gaagggatct ttccccagcc ggtgctgccg caccccgatc
     5161 gctttcgcgc gcttgcgggc tttcatgttg tcgccgcgca atagatggaa gatattggcc
     5221 ttgtgcaggc caaccgtcga gtatgcctgg cggttctcgt cgatgagcag cgggaagtca
     5281 atgccggtct gctcgcggaa gtgtttggca tagctggcgt cgcccagacc cacagcgacg
     5341 atctttccgc ctttgctgcg gatctcctgc tcgtgttcgc gcaactgcgc gacgtgctcg
     5401 cggcagaaga ttcaaccata atgtcgcagg aaaacaacca cggcgggtga atccgaccag
     5461 aatgatccga gcttcaccgc ctttccgtcc acatccggca gggtgatgtt tgcgagcttg
     5521 ctgctatagc tttccggcac ggcgcacatt ttctgcgccg cggatgcctc tgtcaagctt
     5581 tccgggtgcc ggtgctgcgg ttcggcagtt gtggccgtgc tacactccaa atctttgcag
     5641 ctttcgtgca gcaggagtcg gttttcatgc aaatcaataa ttcagtagca gtcatcaccg
     5701 gcgccggatc cggaatcgga cgcgcactcg ccattcaatg cgcgcagaag ggtgcgcagc
     5761 tcgcgcttgc tgacgcgaat agggaaacgc tcgatgaaac cttcagactg ctcgggaagg
     5821 ctcccgcccg gacttacctc gtggatgttg gcgatgcctc tgccatgcag aacttcgccg
     5881 gcgacgtgca gcgcgacttc ggccgcgcct cattgctcat caacaacgca ggcgttgccc
     5941 tgtacggcac cttcgctgag ctcaccctgc aggagttcga gtggctgttc cgcatcaact
     6001 tctggggtgt gattcatggt tgcaagttct tcctgcccat ccttcaacag gaaaagcagt
     6061 cgcgcatcgt gaacatatcc agcgtattcg gtctgatcgg gcctcccgga cagacgcctt
     6121 acgcctccag caagttcgcc gtgcgcggct tcagtgaatc gctgcgcgga gaattgcggg
     6181 ccacatccgt gggagttacc tgcgttcatc ccggtggcat aaggaccaac atcgcaaaca
     6241 acggacgtgc gggttcttcc actgatcctc agggccagca ggaagcccgc gctctcttca
     6301 acaagatcgc gcattccacg cccgaatatg ccgcccacgt gatcattagc gggatcgaaa
     6361 agaataaaga ccgcgtgctc atcgggaaag acgcctacca gattgatcgc acggcccgcc
     6421 tcttccccaa tcgcgcagga accatctttg ccaattatct ggagaagcgc cgtgccaaag
     6481 tcgtgaaatc gctgccggct gctgcaaaat aatcggactc ccggaattgg ctgctcacca
     6541 agctgttcca acccgagtct acttacgagc aaaatccctc aatcgtatgg aggcggagat
     6601 gtcctgccga tttcttcccg cagtcctcgc attggttttg ttccccttgg cggctcgtgc
     6661 ccagcaacct gagcctctca agaatctgca gtactttcct aaggacacta ctcgagacga
     6721 tctcatgcaa accatgcgcg gcttttcctt tgcgttggga gttcgctgcg agtattgcca
     6781 catggcaaaa gacggtgccc cgccgcaaga gcgaaacttc gcttccgacg aaaagcaaac
     6841 aaagagaact gcgcgtgcca tgctacggat ggtcgattcc atcaaccagc aatatatctc
     6901 caagctggag agcaaggcgg agcacaaagt ggaatgtgct acctgccatc accggctaag
     6961 caagccggtc acgatgaatg ctttgctggc ggacaccatg gagaagcagg accttgctgc
     7021 cgccatcact ctgtaccgtg acctgagggc gcgcgtctac ggcggcgggc agtacgattt
     7081 cggagagaca ccgctgaaca tccttacgga aagcctcctc aggcagaaga agaccaaaga
     7141 ggcggcggcg atcatggaat tgaacgtgga ggtcaatcag ccgccctcca tgtgggcgtc
     7201 caatctgctg gcgatggcgc acacagcgaa taaagagaca gagaaggcca aggcagacta
     7261 ccagaaaatc cttcagcgtg atccgaacaa cgcattcgca aaaaagcagc tggaacagct
     7321 gaacagtaca gtccagtagc aagccgggaa attggggcaa gtcatgcagt cgagctgttt
     7381 ttacctgagt acctgcggca actctaaagc tcaaatacct ctctattgat attgagcttc
     7441 tccggaaggc tcccggagcc ccttgatgta ccaaatcgtt tcccgaatcc ttattggctg
     7501 gctcatgttc ctggcgctgg ctgccgccca ggatcgcact cgcatattgg tggtaaacgt
     7561 ccgcgatcag actggctccc ctgtaatggg agctcacgtg agccttgagg gttccggcta
     7621 cagccagact gcaattcccg ttgatgatgg cctctatgaa ttgatgcgca tcccggttcg
     7681 gcagagcctc acgttaaacg taactgcacg gggctttgcc aacttcgacc gcaccatcgc
     7741 cccccaggac agcaatgtac aggtcacgtt gctgccggcc atcattgcgc agcaggtaac
     7801 agttacggcg aaccggtatg aaacccgaat ggaggagacg gccgagaacg tagatgttct
     7861 ttctcgtgcc gctctttcca ccaccgctgc ggagtctatc gacgacgccc tacggcagat
     7921 tccaggattc acgctctttc gccgttccgg cagccgcacc gccaatccca ccacccaggg
     7981 gccctctctc cgcggcgtgg gtaccagcgg cgccagtcgc gccttggtgc tctacaacga
     8041 tatcccgctc aatgatccct tcggtggctg ggtctattgg ggccgtatcc ccagagagga
     8101 tgtggagagc attgaagtgc ttcacggtgg cgcatccagc ctgtatggaa gcggtgcact
     8161 cgccggagtg gtcaatgtgg ttcccgaaca cgagcagcga accctgttct cgtcagagtt
     8221 ctcgggtgga tcagaaggca cacccgactt ctccgcgttg gcttccataa agctcggtaa
     8281 atggacttgg gcggagacag gtgagttctt ccgcacctca ggatacgtcc tggtgccgga
     8341 agatcaacgc ggcgcaattg atacggccgc caattcgctc cacagctccg ccgagagcat
     8401 gttgagccgc aagatcggcc gtggtgatct ctttttcggc agcagcttct accgcgaatc
     8461 gcggcaaaac ggtactcctc tgcagaataa cgacacggac ctgtggcagg tctcaaccgg
     8521 aacgaacttc atcaccagga tggctgcttt tcaggctcgt ctctatggtt ccgggcagag
     8581 ttacaaccag agcttttctt ccattgtggc cgaccgaaac agcgaatcac tggtccggtt
     8641 gcaacacgtc cctgcgcagc aggccggagg gagccttaca gcttccggga gtctcggcag
     8701 ccgcaatacg tgggttgcag gtggtgatac tcgactggtg cgcggcttca gcaatgagac
     8761 catctttacc tccggtacgc catcttctct ggtgagcgcc ggaggtcggc agcttacgtc
     8821 cggaggttac gtccaggacc agattcggct gcttccccgt ctcctgctta ccgctggagt
     8881 tcgctatgac gattgggaca actttgatgc gcactcgcgc accgcgccgc tctccggaac
     8941 cgcgcgtccg ggcttcacgg gtttcactga cgaaagtcag cacgctttca gcccccgggc
     9001 ttcgctgctg tggcgggcga cgcacaatct cgcgctcacg gcctcggcgt acaaatcatt
     9061 tcgtgcgccc acactcaacg agctgtatcg ggccttccgc ctcgggaacg tgctgaccct
     9121 tgcgaatccg aatctgaccg ccgaacgcat caacggcgcc gaaacgggag ctaatgtcag
     9181 cctggggcgg ctgcggctgc actccacctt cttttatatg caagtcttgg atccggtcgc
     9241 gaatgtgacg ctcacagtaa caccggcgct gattacccgc gaacgggaaa accttggccg
     9301 cactcgctcg cgcggtgtcg aatcaggtgc ggagtggcat gcctcgcgtc tctcgctctc
     9361 ggcgcagtac cagttcgtgg acgcggttgt gagcagcttt gccgctgagc cggcgctggt
     9421 cggcctggat gtcccccagg ttgcgccgca tcagtttacg tttaccgggc aatacgcgct
     9481 ttccagcggc tggcttgtcg cgctccaggg gagagcatca agccgccagt ttgacgacga
     9541 cctgaacctg tttcccctcg attcctactt ccagatggat gcctatgtct ccaagcggct
     9601 ccgccccggt gtggacgcgt tcgtcgcaat cgagaacctg accaactccc gcatgatggt
     9661 cgcgcgcacg ccgattgtaa acgttggtcc gcccctattc gcccgagcgg gaattaaact
     9721 ccgattcgag taagcgctac gagcggcgag ggcaaaccgt tcaggtcgta tttagcgccc
     9781 agggccaatc cgcgatttac ctctcttcag aacccgccca gacggtatag gaccctgctc
     9841 aacccggctg ttgatcaccc cgaaacctct ctcaattcaa ggctttgaca aacgcccggt
     9901 tcttagacat aattcgcacg ccgccaaaaa tgcttgcaac catgtggata cgtaatgcaa
     9961 tgggtgcatg tgacggcgcc tgcccttcac actccaccta agaatgatga ggcaggttat
    10021 cagcacattg tgctgaatga tgattcattc aagctttttt tggtttccaa atggttgggt
    10081 gggcgtcaat gaaacgagtc atcgggcgaa cgcaaggctt cgcacaggag ggttcgatga
    10141 ggtcattcaa tctctgcaaa attcttttcg tgtttctcct gatcaccggg atgatgcacg
    10201 cgcaaggcgt aggcgcttca ggcgagttga gaggcacggt tactgaccca tcgggcgcaa
    10261 ccgtatccgg agccactgtg gtggttactg accttggaaa aggcaccaaa cacaccgtga
    10321 tgacggacaa cgatggaact tttcgcgttc ccggtctgct tccggccaat tacagcgtgg
    10381 cggtatccaa atccggcttt cagaccgagg tggccaagac ggtcacagtc aacatcggcc
    10441 agaccagcac cgtgaatttc ccattgaagg tttctcaggt tgctgaatcc gtggaagtca
    10501 ccaccgaagc tccaatcgtg gagaccgacc gcaccgcaca ggcggaaacc atcaaccagc
    10561 agtacattca agacttgccg atcaaccggc gagactatct tacgttcacc ctgttggctc
    10621 cggcggtgtc tgattccact cgtttgtcgg ctgaccagga ttttcgcgta aagcagactc
    10681 cccagagcgg cctttccttc tacggcagca acggacgcgg caatagcgtt acggttgatg
    10741 gcggcgaagc caatgacgat tcgggcggag ttcggctgaa cctggggcag gatgcggtcc
    10801 aggaattcca gattaaccgc agcaattacg gcgccgaact tggcggagcc agtggcgcca
    10861 ccatcaatat cgtcagcaag tcgggaacga ataatgttca tgggaccatc ttcggcttct
    10921 tccgcaacga tgcgcttgat gcagctaatc catttgctct tactcaggct ctgcaacccg
    10981 gacaggtctt caacccgctc ggcccggact ctaccttcac ccacaccaag gattccctga
    11041 gccgtcagca gttcggcggc agcatcggtt tccccatcac caaagacaag acattcttct
    11101 atacagcctt cgaaggtctg cgttccgatg cccagaatgc cgttccgctt ctgcagagca
    11161 cgaaccagct tcgcccgagt tcttccccgc tcaacaatca gcaggcgatc atcacgggat
    11221 tggccacgct accaggcaat ccgtcagtgc cgtgcttgac cgggcaaccg tcgttgccag
    11281 cagcgacctg cgccacaatt ctgggcaacg tgttgaccgt taccaacctt cccatcgcac
    11341 ctccgacgtc gcagtatgtg gtcaaccaac ttgagagtaa cggcgggaac ttcccctata
    11401 acacccgcac ttaccttgct tcggcgcgtt tcgatcatac gttcagtgac aagaaccaga
    11461 tgttcatgcg ctacagcttc ggacacgatg tggagcagaa ccctgacgtg cagtcgctga
    11521 ccggcttctc gcgtgggagt tccgttaatc cggcgttcga caatactttg cagggctcgt
    11581 ggttccatca gttcagcgca aaaacgcaaa atgaagcgcg cgcgcagtac aactacagca
    11641 actttgatgt gataccgaat ttcacgggtc aggtcggctt ggatatcccc ggctttgcga
    11701 atcttggaac caacattttc attcccagca aaaccatcat gcgccggtat gaagtcggcg
    11761 ataacctcac cacgattcac ggaaagcata cgttgaaaat gggggcgact ttcctctatc
    11821 gcggcaatca cactgagtcg gacacgttct tccctggccg gttcgtcttc ggcaacctgc
    11881 ctggtggatt gctgagcccc tgtttgcagg ttccggcggc gtgcggattg actgcgaacc
    11941 ccgctaccat caactcgctc caatcggccg ccctgggcct tccgcagttc taccagcagg
    12001 gattcggcaa tcccatctac aactatcccc gtccttacac ctcggcttac cttcaggatt
    12061 cctgggcgat gaagccgaac tttactctta acgtaggcgt ccgctatgaa cttgattcgc
    12121 agtatggagc gttgcccagc gattacaaca acgtggcgcc acgagttgcg ttctcatggg
    12181 atccgtttag cgaccacaag accgtaattc gcgctggcta cggaattttc tactctccga
    12241 tctatggaca gatcgcggac gtcgtacaga cacttggctt cgtcaataac ttccgccaaa
    12301 ttccgcaggt ttttgttccg cttaccggtg cacccgggaa tccggcactt aactcggcag
    12361 tgatctacca gacccttttt gcgcagggga aggtgcagtg cacctcgccg gccgccggcc
    12421 agcaggcctg catcactccg ggcgacctca cgcagttcgg cattaacata actcagcaag
    12481 ggccgcctcc gccgttgagc gtcgtcttca gcgctcagcc gggttaccgg aatccgtact
    12541 cgcaacaggc ggagtttggt attgagcgcc agatcgccaa ggacttttcc gtctcgctaa
    12601 gcggaatcta cgttcatacc attggcttgc cggtggcaat cgacgtcaat gcattaccca
    12661 caacgccaac cagatcagta ccgttggcca gcggtggcac tgcgacgttc cacaactgga
    12721 gcgctccaca gtgcgcagtg cttgtaaata atccctgctt tgcccagcct gcgctgctgc
    12781 aaaccgacca gtattcctct ttaggtgctt ctctgtatga gggcggcatc ctggaggcaa
    12841 agaagcgctt cagcagctac ctgcagctct tcggcagtta cacgctcagc aaagccttcg
    12901 ataccaccac cgatttcaac agtgactttg gcccccagga caatacctcc ctggctgccg
    12961 agcgcgctct ttcgaacttt gatcaacggc acaaggtggt cgtggctggc gtagtggata
    13021 cagggaatcg cggcaacggc tctcttggta aattcgcttc aggttggcag tttgctccga
    13081 tttaccgttt caacagcgga catcccttca acctgctggc cggagcc
//
LOCUS       DASQYP010000395         2169 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_61283, whole genome shotgun sequence.
ACCESSION   DASQYP010000395 DASQYP010000000
VERSION     DASQYP010000395.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 2169)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2169)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2169
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_61283"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(43..741)
                     /locus_tag="VE783_12880"
     CDS             complement(43..741)
                     /locus_tag="VE783_12880"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HYX54343.1"
                     /translation="MPSVLLIDDDTELTKLLEEYLQSEQLQVDAAHDGPSGLEKAQNG
                     QYAVVVLDVMLPGMSGLDVLKQLRQKSTVPVLMLTARGSELDRILGLELGADDYLPKP
                     FNPRELVARLRAILRRTSNAAGAAPGQPVRVADVEVHPESRSVACAGKQVTLTGAEFD
                     LLYTFLRNPGKIISREDLTQAALGRPMSPMDRSIDVHVSNLRRKLGSYDGDQERIKAI
                     RGSGYVYLLPGEQP"
     gene            900..1394
                     /locus_tag="VE783_12885"
     CDS             900..1394
                     /locus_tag="VE783_12885"
                     /inference="COORDINATES: protein motif:HMM:NF025173.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Spy/CpxP family protein refolding chaperone"
                     /protein_id="HYX54344.1"
                     /translation="MNKKIILVSAIILAMVVGLAAAFAQQAGPGRGVGHRFGHDGWML
                     KKMTKELNLTEAQQTQVKSILQAERAKMQPLMQQMHANELARNQAVTENFNEADARAF
                     AGKQTQLQADLIVEKERTKSQIYALLTPEQRQKAMQLLQQREQNRQERMQKHSQKQQA
                     PANQ"
BASE COUNT          484 a          688 c          593 g          404 t
ORIGIN      
        1 gccagaacga gataaagatc ttcaggaaca gactgcgata cttcacggct gctctcccgg
       61 aagcaggtag acatagccgc tgccgcggat ggctttgatg cgttcctggt cgccatcata
      121 ggagccgagc ttgcgtcgca gattgctcac atgcacgtca atgctccggt ccatgggcga
      181 catcggcctc cccagcgctg cctgcgtcag gtcctcacgg ctgatgatct tacccgggtt
      241 ccgcaggaat gtgtagagca gatcaaactc cgccccggta agagtaacct gcttgccggc
      301 acaggcaaca ctgcgcgatt caggatgcac ttccacgtct gccacgcgca ccggctgccc
      361 gggagctgcc cctgccgcgt tgctggtgcg gcgaaggatg gcgcgcaggc gcgccacgag
      421 ttcgcgggga ttgaacggct tgggcaggta atcgtctgcg ccgagctcaa gtcccaggat
      481 gcgatcaagt tcgctgccgc gcgctgtaag catcagcacc ggcacggtac tcttctggcg
      541 caactgcttc agcacatcca ggccgctcat gccggggagc atcacatcca gcaccaccac
      601 ggcgtactgg ccattctggg ctttttccag gccggaaggc ccgtcatgcg cggcatccac
      661 ctgaagctgc tcgctctgga gatactcttc cagcagcttg gtcagctctg tatcgtcatc
      721 aatgagaagt accgaaggca tgttctctca ccttaaaccc cggcagcata cctaaccggt
      781 taagaaatgt gaaggcttgc agccttaaca actcattacc ttacacgcac agcaacccgg
      841 gttgatactg gtggcagctc agaacgggct gccgctcgga ttgtaaaagg agtttcccaa
      901 tgaacaaaaa aattatcctg gtctccgcca ttattctggc aatggttgtg gggctggccg
      961 ccgcgttcgc gcagcaggcc ggaccgggcc gcggagtcgg tcaccgcttt ggccatgatg
     1021 gatggatgct gaaaaagatg actaaggagc tgaaccttac tgaggcgcag cagacccagg
     1081 tcaagagcat cctgcaggcg gaacgtgcca agatgcagcc gctcatgcag cagatgcacg
     1141 cgaacgaact ggcgcgcaac caggccgtaa ccgaaaactt taacgaagca gacgcgcggg
     1201 ccttcgccgg caagcagacg cagcttcagg ccgacctgat cgtggagaaa gagcgcacca
     1261 agtcgcagat ctacgccctg ctcacgccag agcagcgcca aaaagcgatg cagctcctcc
     1321 agcagcgcga acagaaccgt caggaacgca tgcagaagca ctcccagaag cagcaagcgc
     1381 cggccaacca gtaagacatt gttcctggag cattttcctc tcccctcctg gagtgaaggg
     1441 cggctgaaat ggccgccctg ttttttccct tgcgtttcgg tgcggtgtgg gcgccgggac
     1501 gttcggcgcc gcagtacgca tgcaactttg gagattgcca ccggcgcggg ctcttttcca
     1561 gccgcgaaaa cctgcccaca accgcgtgca ctaaccttcc cgggcgactg cggaatgtta
     1621 ctccgcagtt aacactttgt accccacccg ggggtctccc cggcctcccc aaaaacaaaa
     1681 gacttacgtc gaagctcgcc gggggctccc cggcgagctc cggggagccg tggcaacttt
     1741 tgcgacctgc ccggcacctc cgcgcgttta ccactgtgcc aacagctcaa tgcgccgctc
     1801 attgcctatc gatatttact agttgctaaa ttgtcaaaga tcttcccagg taccaaatac
     1861 caactaccag gcacctgcgt tcgctctggg caaatcaagc caagagtacc acattcccgc
     1921 tcccgaatca acagcgaaag aggacaatgc ctctcctgtc caaaattccg caagctatac
     1981 accgtccagt gagctgcgcc cccgtgcgca atgagccggc aatcgagcca tgacgtaaca
     2041 tagtcaaagc ggatactgca ctgaccctcg ggcatttctc tgggacagat tacgaggtcg
     2101 acagcatgga ccacccgccc agttgagaac cggtctcccc gcatgtcgcg tgctcaaccg
     2161 aagacacgt
//
LOCUS       DASQYP010000396         2100 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_61316, whole genome shotgun sequence.
ACCESSION   DASQYP010000396 DASQYP010000000
VERSION     DASQYP010000396.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 2100)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2100)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2100
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_61316"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            69..356
                     /locus_tag="VE783_12890"
     CDS             69..356
                     /locus_tag="VE783_12890"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX54345.1"
                     /translation="MEKLIHSLKERSGKIGIVIAVLTLAWSSISSYVEASTHLQDIQA
                     QQEKRLSDLEAQVRNDLATRREIQDLKTDTSARFDRLEDLLNRVLAPHRSR"
     gene            677..>2100
                     /locus_tag="VE783_12895"
     CDS             677..>2100
                     /locus_tag="VE783_12895"
                     /inference="COORDINATES: protein motif:HMM:NF016101.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016788 - hydrolase activity, acting on
                     ester bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alkaline phosphatase family protein"
                     /protein_id="HYX54346.1"
                     /translation="MKCLPGLSLALLLVLAVSCGGLGNGNSSAAAPSPTPTPSPVAQT
                     GDITAVNHVIFLMQENRSFDHYFGFMTQYRQAHGIPINSSDGKIRDLSDPAAQVAASL
                     NVAAGNPGPILPYHTGSVCTEDLTPDWAEAHHEMNDKDPAHILNAPMDGFVQTAKNVS
                     VGLGPGVLFDQDGHRAVGIFDDSQLNFYYATASNFAMGDMFFSPIPTRTGSNRLYSHA
                     ATSGGLVHADTSKSGQLASKTIWRALDEAGISWKIYISDWAVNHFTFFDFFTDSNDPT
                     RQAKIVSIDQYFSDVAAGTLPQVALIETGMETGRDEHPTNNPGKGIPVPVSQAINVQH
                     GAAWIAQLINALEFSPSWKDSAFFFAFDESGGTFDHVPPISVPSPDGIKPKDFAVPKD
                     CFDQPCDSFDLNTTGFRVPNFVVSPFAKKNFVSHTPMDYTAILKFIETRFKVPPLTAR
                     DAAMPDMTEFFDFTNKPWATPPSPP"
BASE COUNT          459 a          693 c          532 g          416 t
ORIGIN      
        1 agaaagcggc agaacccata aagcaacccg ccgtccccgc cggccagaaa ggaacctgac
       61 ttcaatctat ggaaaaactc attcactcgc tcaaggaacg ctccggcaag atcgggatcg
      121 taattgccgt gctcaccctg gcgtggtcgt caatcagcag ttacgtggaa gccagcaccc
      181 acctgcagga cattcaggcg caacaggaga agcgcctctc tgacctggaa gcccaggtgc
      241 gcaatgacct ggccacccgc cgcgaaatcc aggacctgaa gaccgacacc tccgcccgct
      301 ttgaccggct ggaagacctg ctgaaccggg ttctcgctcc ccatcgcagc cgctaatccc
      361 aatcgcctta ttcaccacgg aggcacggag acacggaggc aaaagaggga tttccgccga
      421 agttccgagc gcagcgaggg atccctatcg tcttcagaga tcgtgtacct ggagttcatc
      481 cgcggtgata gggacctctc acccgcaaag aacgcgggtt cgaggcttgg gaaaaccaat
      541 taccaactac caaataccaa ctaccaaata ccaactacca actaccaact accatttacc
      601 aatcccgtcc taagtaaatt ttccctcgct gcagattgca aacccagagc acccggcccg
      661 catcaactct cacattatga agtgcctgcc cggcctctct cttgccctgt tgctcgtgct
      721 tgccgtttcc tgtgggggac tcggaaacgg aaattcaagc gctgccgccc ccagccctac
      781 tcccaccccg tcaccggttg cgcaaaccgg cgacattacc gcggtgaacc acgtcatctt
      841 cctgatgcag gagaaccgca gcttcgatca ttattttggc ttcatgacgc agtaccgcca
      901 ggcgcatggc atccccatca acagttcgga tgggaaaatc cgtgatcttt ctgatccggc
      961 agctcaggtt gcggcgtcac tgaatgtggc tgcggggaat cccggcccaa tcttgccgta
     1021 ccacaccggc tccgtctgca ctgaggacct tacgccggac tgggcggagg cgcatcacga
     1081 gatgaatgac aaggatcccg cccacatcct gaatgccccg atggatggct ttgtccagac
     1141 ggcgaaaaat gtaagcgtcg ggctggggcc gggcgtgctg tttgatcagg acggccatcg
     1201 cgcggtggga atctttgacg acagccagct caatttctac tacgccacgg cttccaactt
     1261 cgccatgggc gacatgttct tttctcctat cccgacccgc accggcagca accggctcta
     1321 ttcgcatgcc gctacctccg gcggtctggt gcacgcggat accagcaaga gcggccagct
     1381 ggcgtcgaag acaatctggc gcgccctgga tgaggccggc atttcctgga agatctacat
     1441 ctctgactgg gcggtcaatc atttcacgtt tttcgatttc tttaccgact cgaacgatcc
     1501 cacgcgccag gcaaagatcg tctccattga tcagtatttc agtgacgttg ctgccggcac
     1561 gcttccccag gtagcgctga tcgagaccgg catggaaacc ggccgtgacg agcaccccac
     1621 caacaacccg ggcaagggca tcccggttcc ggtttcgcag gccatcaacg tgcagcacgg
     1681 cgcggcctgg atagcgcagc tcattaatgc cctggagttc tcgccatcat ggaaagattc
     1741 ggccttcttc ttcgccttcg acgagagcgg cggaactttt gatcacgtgc cgcccatcag
     1801 cgtccccagc ccggacggaa tcaagccgaa agacttcgct gtccccaaag actgcttcga
     1861 ccagccctgc gacagctttg acctgaacac taccggcttc cgcgtgccga atttcgtggt
     1921 ttcgccgttc gcgaagaaga actttgtttc gcacacgccc atggattaca cggcgatcct
     1981 caagttcatt gagacccgct tcaaggttcc gccgctcacg gcccgcgacg ccgccatgcc
     2041 cgacatgact gagttcttcg atttcaccaa caagccttgg gctactccgc cctctccacc
//
LOCUS       DASQYP010000397         8429 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_21094, whole genome shotgun sequence.
ACCESSION   DASQYP010000397 DASQYP010000000
VERSION     DASQYP010000397.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 8429)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8429)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8429
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_21094"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            661..1611
                     /locus_tag="VE783_12900"
     CDS             661..1611
                     /locus_tag="VE783_12900"
                     /inference="COORDINATES: protein motif:HMM:NF012451.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="J domain-containing protein"
                     /protein_id="HYX54347.1"
                     /translation="MRHKSAISYYRALGLSPGASAKDVRRAYIELVKKWHPDRFAQKS
                     ARDQAVAQEKVKEINEAYHFLREHQGWYVPPAPAYGRRDEWSEYRRWADYAPPTVDPF
                     EGDYQYRPVRASRANPLVWGTAFVLLSFAFQAITGWNVFTGRMPPANSVQAAAEPASH
                     SARVRAAGIGGLGTFSSNSRPEQLQVFFVGSAKADVYRVQGMPNWSNEQEWRYGSSRI
                     YFRNGIVERWESHSDFPLKTIEVPAVSAQSVIDRGATIAEVLAIQGVPKSLKDNYWAY
                     PNDQVVKTTYWQYGKSQIEFSDGKVIGWKEAAGEKLRVRR"
     gene            1895..2935
                     /gene="hrcA"
                     /locus_tag="VE783_12905"
     CDS             1895..2935
                     /gene="hrcA"
                     /locus_tag="VE783_12905"
                     /inference="COORDINATES: protein motif:HMM:TIGR00331.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_process: GO:0009408 - response to heat [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="heat-inducible transcriptional repressor HrcA"
                     /protein_id="HYX54348.1"
                     /translation="MPNPGQIGPREREILTAIVETYISSGEPVGSRTLSRLNKDGLSP
                     ATIRNVMADLVDAGFLEQPHTSAGRIPTAQAYRYYVDQISGKAVLSASDQNLISENLA
                     GTVDIQQFLERTSHVLSLVSSGVGVAIARTGSQNALEHVYFSRQAPNKVLAVVVTKSG
                     VVHDRIMRLENDLSQTDLDTAANYINANFRGWTVDNVKAELGRRIEHERTEYDRLMQS
                     LRELYKSGALATNARNVFVEGVANLVAKEEDRERLRDLLKTLEEKERVAELLSAYLDT
                     RQESVRVVIGLEEAVPEMRNFVLIGAPARVGDEMQGSLAVIGPTRMDYQHTITAVSYI
                     AQLFDKLLNENV"
     gene            2971..3561
                     /gene="grpE"
                     /locus_tag="VE783_12910"
     CDS             2971..3561
                     /gene="grpE"
                     /locus_tag="VE783_12910"
                     /inference="COORDINATES: protein motif:HMM:NF010738.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000774 - adenyl-nucleotide exchange
                     factor activity [Evidence IEA];
                     GO_function: GO:0042803 - protein homodimerization
                     activity [Evidence IEA];
                     GO_function: GO:0051087 - protein-folding chaperone
                     binding [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotide exchange factor GrpE"
                     /protein_id="HYX54349.1"
                     /translation="MSKSNGQAEIPVNEEQKVEQELPAADPGDGFQERAEPASAAEAA
                     AQTPETEKIRAERDSLLDRLARLQAEFDNFRKRSARENENFREYAVGEAARGLLPVID
                     SFGLALKNADAKPEDLRKGVELIYKQLQDALQRMNVQRVPAQGEPFDPRLHEAIEMVP
                     SDEVPDNHVLEELQPGYRIKDRLLRPAMVRVAKKIS"
     gene            3614..4741
                     /gene="dnaJ"
                     /locus_tag="VE783_12915"
     CDS             3614..4741
                     /gene="dnaJ"
                     /locus_tag="VE783_12915"
                     /EC_number="1.8.4.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR02349.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA];
                     GO_process: GO:0009408 - response to heat [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone DnaJ"
                     /protein_id="HYX54350.1"
                     /translation="MATQAKRDYYEVLGITRTASEQEVKSAYRKLAMQYHPDRNPGNH
                     EAEEKFKECSEAYSVLIDSEKRERYDQFGHAGVNGGGGVGFDPSNFQDFGDIFGDIFS
                     DFFGVNVGGGRGRGRVQRGGDARADLTLTFEEAAVGKKTQVKVRRYESCETCHGTGAA
                     AGKGPTVCTMCGGRGQVRYQQGFFSISRPCPTCQGAGRVISDPCAKCKGEGRTMREKT
                     LDVSVPAGVEDGTRIRYQEQGDAGPQGAPPGDLYVVLHVKPHAFFEREGKDLFCSVPI
                     SFAQAALGAEIVIPTLDGEHKLKVPEGTQTGTTFRIRGKGVPAVQSSGKGDLFVKVRV
                     QTPAKLNKKQRELLEQLAESSQLENKPEPRSLFDKVKEIFG"
     gene            4734..5102
                     /locus_tag="VE783_12920"
     CDS             4734..5102
                     /locus_tag="VE783_12920"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX54351.1"
                     /translation="MGKYYIWFVIVVAGLAGAIRVMLPRRFAELQLDWLKRSAPGKAK
                     LRALLFLVVGISFGALYFIPWGHQAWVIIGTIFSFISAAEVFFQAQYPTLDSLVFQSR
                     LVGILYLGLAAGSYVMLSRI"
     gene            5099..5806
                     /locus_tag="VE783_12925"
     CDS             5099..5806
                     /locus_tag="VE783_12925"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR00046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RsmE family RNA methyltransferase"
                     /protein_id="HYX54352.1"
                     /translation="MTRRRWIADRVEGDHAFLLGQNANHLFRVLRAEAGQQFDVAANG
                     VVRLGTIMSATVDKVEFHLGEEVESESLPEIAVYLSIFKFDRMEWALEKLTELGVMRV
                     VPVIASRSAHHLVKAADARVERWRKIVREAAQQARRATPPDVATPIELKTALSGKEES
                     RILLAEGEEALSLKAALAGKRPPLALAFGPEGGWTSEELDLFAATGWTSASLGHTVLR
                     AETAAIAAASVAFAELN"
     gene            5895..>8429
                     /locus_tag="VE783_12930"
     CDS             5895..>8429
                     /locus_tag="VE783_12930"
                     /EC_number="3.6.4.-"
                     /inference="COORDINATES: protein motif:HMM:NF012789.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004386 - helicase activity [Evidence
                     IEA];
                     GO_function: GO:0004519 - endonuclease activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA helicase"
                     /protein_id="HYX54353.1"
                     /translation="MVTARFEPNPRQKEAIEHITGPLLVLAGAGTGKTTVLVERIAHL
                     IEAGHARPDEILAITFTENAARELQERVERRLNRKAAIGTGNFHSYCLGILHRCERNF
                     SLLLPEDVYVFLRQNIADLGLERFIKPSDVGQFLHDLKDFFDRCHEELISPERFSEYV
                     NTLRPGSQLPRNCRTKELDRLEEDEIVARWQEIARVYSNSLRLFDQQNLGTFGLMISR
                     AVGLLQENEALLAEERARARFILIDEFQDCNSSNIRLAELLGGAEQNIFAVGDPDQAI
                     YRFRGASSAAFEDFQHRFPSTRAVILDENQRSKGNILRVAYSAIRHNPPVRPISPNIQ
                     FQRTPLESGRDRREQEQGRLVFDDPVEVVMSSTDPHEAVDIAEEIARLKQSQPAKERL
                     TFAVLYRTHAHREKIIEELARRGIPFVVRGIGVLETPAARDYMAVIRATMNDSDADSV
                     FRVCALPQFEVSPDELRSKLAVAGRGNTFKSVLQAMPSGKRVLTALSDAREFIITQRL
                     SAAGAFEYLALQFNFPKGDPAVKALLRFVNEWEQKPFVRDHSLNAFLEYMDLFQEGGG
                     VIPLRSEAEMIEEEERNPDAVRLMTVHAAKGLEFNHVWLLRVISPGFPTTYKEPLFEF
                     PPALRSSIVLGDNKEVNEQEERRLFYVAITRARDRLAMHSRFGRGKDRTPPGFLRPLL
                     SDRSIAGSINNRDSCQPDIALAPAQVERSPVSTWMLLPPAFKRDELALSAHSVESYST
                     CPLKFKLERDWRIPGEAAANMQYGAAIHTVLRQYYDPAPHAPELSIDDVVAAFRTEFN
                     KAVVDDPVQRELYEKQGEEQIRALLAIKPRGSFEVIAAEVKFEFTID"
BASE COUNT         1854 a         2231 c         2680 g         1664 t
ORIGIN      
        1 attgaggcag caaagcgtac cggcaaccgg cacgcactct ctgaaatgat gggaatgctg
       61 gacgagatca gccggtaaac agagctgcca gacaacaatt ccgatctgga caataaaggc
      121 gaatatatgg caaatttaca gggcggcgtg aacagcgccg aaggcgccag tccgccccag
      181 ggcggaagtg gcgttctttg acagagcagg tggcaagtag cagttagcaa gagctgccgc
      241 aggacaactg taacaggtca ttgatcggtg atccggagga tggcggttgg gatggatcgg
      301 gattgagccg ggcatcccga ccgggatgag cccgggatga gggcgggatg acttgggatg
      361 gattgggatg aacatagggg gggcagaggg gcccccaaaa tcgccgtgat cgcgcgtaat
      421 cgccgggaat cgccgtaatc ggaaaggcac accagcccga aaaagccttt cgccgcagat
      481 gaacgcagat gggatgggga tcaccttggc gatgcagcta ctaaatgctt tgcaatccta
      541 gttgaatgga tggggtaggg gctgcacaga accgggagat ctggcgatcg gggaggtttt
      601 ccgcgcgcag atgagccgaa caggtttaag ctagtggcta gcagctagcg gctggattat
      661 atgcgtcaca agagcgcgat ctcgtattat cgcgcgctgg gcttatcccc cggagcgtct
      721 gccaaggatg tgcgccgcgc atacatcgaa ctggtcaaga agtggcatcc tgaccgtttt
      781 gcccaaaaga gcgcgcggga tcaggcggtg gcgcaggaga aggtgaagga gatcaacgaa
      841 gcctaccatt ttctgcgtga gcatcaaggg tggtacgtgc caccggctcc ggcttatggc
      901 cgccgggatg aatggagcga gtatcgccgc tgggcggatt acgctccgcc aaccgtggat
      961 ccgtttgagg gcgattatca gtaccgcccg gttcgagctt cccgagctaa cccgctggtc
     1021 tggggtacgg ctttcgtgct cctgtcattt gcgttccagg cgatcacagg ctggaacgtc
     1081 ttcacgggac gaatgcctcc tgcgaatagc gtgcaggcgg ccgcagaacc agcttcacac
     1141 tccgccaggg tgcgtgccgc cggcataggc gggctgggga cgttcagcag caatagcaga
     1201 cccgaacagc tgcaggtttt tttcgtggga tcggccaagg cagatgtcta tcgtgtgcag
     1261 gggatgccca actggtccaa tgagcaggag tggcgctacg ggagctcacg gatttacttc
     1321 cggaacggga tcgtggaacg ctgggaaagc cattcagact tcccgctcaa aaccattgaa
     1381 gtacctgcgg tcagcgcgca aagcgtcatc gacagggggg ctacgatcgc tgaggtgctc
     1441 gcaattcaag gggttccgaa gtcgctgaag gacaactact gggcgtatcc caacgatcag
     1501 gtggtcaaga ccacatactg gcagtacggg aagtctcaga tcgagttctc agacggcaag
     1561 gtaattggct ggaaagaggc tgcgggggag aagttgaggg tgaggcggtg attctggctt
     1621 ttagccattg gccgttggca cttagctgtg acctaagaga agcgtagatg gaagtggtga
     1681 cttagagctc gggttcccat ccgcagaaag aagatgcagg tggaggtgcg agccaaaggc
     1741 caagggagta acgccaaagg gtcggttttg gcactctagc cggtcaagtg ctatcttgac
     1801 aacaactcac taatattcct aaaatctaac aaggcagcag cctctcttcc agcatccaag
     1861 atgatgtaaa taaaagggtt actgtctcta ggcaatgcca aatccgggac aaatcggccc
     1921 gcgcgagcgg gagatcctta ccgcgatcgt cgagacttac atctcgtccg gcgagccggt
     1981 agggtcgcgt acgctctcac gcttaaataa agatgggctg agcccggcga cgatccggaa
     2041 tgtaatggcg gaccttgtag atgccggttt cctggagcag ccgcatactt cggccggccg
     2101 gatccccaca gcccaggctt accggtacta cgtggaccag atttccggga aggcggttct
     2161 ttcagcctct gaccagaatc taatatctga gaatctggcg gggacggtgg atatccagca
     2221 gttcctggag cggacatcac acgtactatc gctggtttcc agcggcgtgg gtgtggcgat
     2281 tgcccggacg ggatcgcaga atgcgcttga gcatgtgtac ttttcgcggc aggcgccgaa
     2341 caaggtgttg gccgttgtgg tcaccaagtc gggcgtggtg catgaccgca tcatgcggct
     2401 ggagaacgat cttagccaga ccgatctgga cacggcggcg aactacatca acgccaactt
     2461 ccgcggctgg accgtggata acgtgaaagc ggagttgggg cggcgcattg aacatgaacg
     2521 gacagagtat gaccgcctga tgcagagcct gcgtgagctt tacaagagcg gagcactcgc
     2581 caccaacgcg cgcaacgtgt ttgtggaagg cgtggccaat ctggtggcga aggaagaaga
     2641 tcgcgagcgg ctgcgggact tattgaagac gctggaagag aaagaacggg tggcggaact
     2701 gctgtcagca tatctggata cgcgccagga gtcggttcgc gtggtgattg gactggaaga
     2761 ggccgtgccg gaaatgcgga actttgtgct gataggcgct ccggcccgcg ttggggatga
     2821 aatgcagggc tcgctggccg tgattggccc aacccgcatg gattatcagc acaccatcac
     2881 ggcggtctca tacattgctc agctttttga caagctgctg aatgagaacg tgtgaagaaa
     2941 ataccaatac atcgaccagg tgcagtaaag atgagcaagt ccaacggaca ggcagaaatt
     3001 cccgtgaacg aagaacagaa agtggagcag gaactaccgg cggcagaccc cggagacgga
     3061 ttccaggagc gggcggaacc ggccagtgcc gccgaagccg cggcccagac accagaaaca
     3121 gaaaagattc gcgctgagcg tgacagcttg cttgaccggc ttgcgcgcct gcaagcggag
     3181 ttcgataact ttcgcaagcg ctctgcccgg gaaaacgaaa attttcgcga atacgcggtg
     3241 ggcgaagccg cacgcggcct gctgccggtg attgatagct ttgggttagc gctgaagaat
     3301 gcggacgcga aaccggaaga cctgcgcaaa ggcgttgaat tgatttacaa gcagcttcag
     3361 gacgcactgc agcgcatgaa tgtgcagcgc gtgccagcgc agggcgagcc gttcgatccg
     3421 cgactgcatg aggccattga gatggtgccc agtgacgaag tgccggacaa tcacgtactg
     3481 gaagagcttc agcccggcta tcgcatcaaa gaccggctgt tgcgccccgc catggtgcgg
     3541 gtggccaaga aaatttcctg agtcacggtc ccatcactga tcccaacagc agagattaag
     3601 cccgaggaac gatttggcaa cacaggcaaa acgcgattac tacgaagttc tggggataac
     3661 ccgaaccgcc tccgagcagg aggtgaagag cgcctaccgc aagctggcga tgcagtacca
     3721 tcctgaccgg aatccgggga accacgaggc ggaagagaag ttcaaggagt gttcggaagc
     3781 gtacagcgtg ctgatcgact cggaaaagcg cgagcgctat gaccagtttg gccatgccgg
     3841 cgtgaacggc ggtggtggcg taggatttga tccttcgaac ttccaggatt tcggcgatat
     3901 ttttggcgac atcttcagtg acttcttcgg ggtgaacgtg ggaggcgggc ggggtcgcgg
     3961 acgagttcaa cgcggaggag atgctcgggc ggaccttaca ctcactttcg aagaagctgc
     4021 ggtcggcaag aagacgcagg tcaaagtgcg tcgttatgag agctgcgaga cgtgtcacgg
     4081 aaccggagca gcggcgggga aagggccgac ggtctgcaca atgtgcggtg gccgtggcca
     4141 agtgcgttat cagcagggat tcttctccat ctccaggcca tgcccaacct gccagggcgc
     4201 aggtcgcgtg atctccgacc cgtgcgctaa gtgcaaaggt gagggccgca ccatgcgcga
     4261 gaagacactg gacgtctccg tgcctgccgg cgttgaagac ggcacgcgca tacgttatca
     4321 ggagcagggc gatgccggac cgcagggcgc gcctccgggc gatttgtacg tggtgctgca
     4381 tgtgaagccg catgcgttct ttgagcgcga aggcaaggac ctgttttgtt ccgtcccaat
     4441 ttcatttgcg caggcggcac tgggagctga aatcgtcatc ccaactctgg atggcgagca
     4501 caagctcaag gtgcctgaag gcacccagac cggcaccaca ttccgcattc gcggcaaggg
     4561 cgtgccggcg gtgcagagct caggcaaggg cgacctgttt gtaaaggtgc gcgtgcagac
     4621 gcctgccaag ctcaacaaga agcagcgcga gcttctggaa caactggcgg agtcctcaca
     4681 gctagagaac aagccggaac cgcggagcct gtttgacaag gtgaaagaaa tctttgggta
     4741 agtactacat ctggttcgtg attgtggtag cggggctggc gggggccatc cgcgtgatgc
     4801 tgccgcgccg cttcgccgaa ctgcaattag attggctgaa acgctcggcg ccgggaaagg
     4861 caaagctacg cgcgctgctg tttctggtgg tggggatctc tttcggtgcg ctttatttca
     4921 tcccttgggg gcaccaggcg tgggtgatta tcggcacgat tttttccttc atcagcgctg
     4981 ctgaggtttt ctttcaggcg cagtatccca cgctggactc gctggttttc cagagccggc
     5041 tggtggggat tctttatctg ggacttgcgg ccggctctta cgttatgctg tcgcgcatat
     5101 gacgcgccgc cgctggatcg ccgaccgtgt ggaaggtgat cacgcatttc tcctcgggca
     5161 aaacgccaac catcttttcc gcgtgttgcg cgccgaagct ggtcagcagt tcgatgttgc
     5221 tgcgaatgga gtggtgcggc tgggcacaat catgtcggct acggttgata aagtcgagtt
     5281 tcatctgggc gaggaagtgg aaagtgagtc gctgccggag atcgcggttt atctctcgat
     5341 cttcaagttt gatcgcatgg agtgggcact ggagaagctg acagagttgg gcgtgatgcg
     5401 tgttgtcccg gtgatcgcct cgcgcagtgc gcatcacctg gtaaaggcgg ccgatgcgcg
     5461 cgtggagcgc tggcgcaaga tcgtccgcga agctgcccag caggcgcgac gggcaacgcc
     5521 gccggatgtc gcaacgccaa tcgagttgaa gactgcactg agcgggaagg aagaatcacg
     5581 cattttactc gccgagggtg aagaagcgct ttcactgaag gcagcactcg cgggtaagcg
     5641 accgccgctg gccctggctt tcggccctga agggggatgg acttcggagg aactggacct
     5701 gtttgcggcc acgggctgga catcggcatc actggggcat actgtccttc gggcggagac
     5761 tgcagccatc gcagcggcaa gcgtggcatt tgcggaactg aactaatcga cgactcttcc
     5821 acaaaaaatc ctcagaaatt tgagtcgcag ctttatcagt tcgcctaatt ttcgtgccat
     5881 aatgctcggt aagcatggtg acggcaaggt tcgaacccaa tccgagacag aaagaagcca
     5941 ttgaacacat tacgggaccg ctgctggtgc tggcgggagc gggaaccgga aagaccactg
     6001 ttctggtgga acgcattgct cacctgattg aagccgggca tgcgcgtcct gacgaaattc
     6061 tggctatcac ctttacggaa aatgctgccc gggagctgca ggagcgggtg gagcgccggc
     6121 tcaatcgcaa ggcggccatt gggaccggca actttcactc ttactgtctg ggaattctgc
     6181 accgctgcga gcggaatttc tctctgttgc tgccggaaga tgtttacgtg ttcctgcggc
     6241 agaatattgc tgaccttggc cttgaacgct ttatcaagcc ttctgacgtt ggccagttcc
     6301 tgcacgacct gaaggatttt ttcgatcgct gccatgaaga gctgatcagc ccggaacggt
     6361 tttctgaata tgtgaacacg ctgcgccctg gttctcagct gcctagaaat tgccgtacca
     6421 aagagctgga ccgcctggaa gaagatgaga tcgtggcgcg gtggcaggag atcgcgcgtg
     6481 tctattcgaa tagcctgagg ctcttcgacc agcagaacct cggcacgttc ggcctgatga
     6541 tcagccgggc tgtcggcctg ctgcaggaga atgaagcgct gttggcagaa gaacgcgcac
     6601 gggcgcgatt catcctcata gacgagtttc aggactgcaa ctccagcaac attcgactgg
     6661 cagaactgct gggcggcgcc gagcagaaca tttttgctgt cggcgatccg gatcaggcca
     6721 tttatcgctt ccgaggcgca tcgagcgcgg cgtttgaaga ttttcagcac cggttcccat
     6781 ccacaagagc tgtgattctc gatgagaacc agcgctcgaa gggaaacatc ctgcgggtcg
     6841 cctattccgc tatccgccat aacccgccgg tgcgtccgat cagccctaac atccagttcc
     6901 agcgcacccc gctggaatct ggccgcgatc gccgcgagca ggagcagggc cggcttgtat
     6961 tcgacgatcc ggttgaagtt gtgatgagct ccactgatcc gcatgaggcg gtggatatag
     7021 cagaagaaat agctcgcctg aagcagagcc aacccgcaaa ggaacggctc accttcgcgg
     7081 tgctctaccg cacacatgcg caccgggaga agatcattga agagcttgcc cggcgtggta
     7141 ttccattcgt ggtgcgcggc attggcgtgc tggagacgcc ggcggcgcgc gactacatgg
     7201 cggtgatccg ggcaaccatg aatgacagtg acgccgacag cgtcttccgc gtctgcgcgc
     7261 tgccccagtt tgaggtctcg cccgacgaac tccgctccaa gctcgcggtt gcaggtcgcg
     7321 gtaacacctt caagagcgtt ctccaggcga tgccttcagg caagcgcgtg ctcacggccc
     7381 tgagcgacgc ccgcgaattc atcattacac aaaggctcag cgctgccggc gcatttgagt
     7441 atctggcgct tcagttcaat tttcccaagg gcgaccccgc agtgaaggcg ctgctgcgtt
     7501 tcgtgaacga atgggagcag aagccgtttg tgcgcgatca ctcactgaat gcttttctcg
     7561 aatacatgga tctgtttcag gaagggggcg gagtgatccc gctgcgttct gaggcggaaa
     7621 tgatcgagga ggaggaaaga aatcctgatg cggtacgcct gatgacggtc catgccgcta
     7681 aagggcttga gttcaaccac gtctggctgt tgcgcgtgat ctcgcccggc tttcccacca
     7741 cctacaagga gccgctcttt gagtttccgc ctgcactgcg cagctcgatt gtgctcggcg
     7801 acaacaagga agtaaacgag caggaagagc gccggctgtt ctatgtggcg atcacccgcg
     7861 cgcgtgaccg gctcgccatg cattcacggt tcggccgtgg gaaggaccga acaccgcccg
     7921 gatttcttcg gcctctgctg agtgatcgca gcatcgccgg ttccatcaat aatcgcgata
     7981 gctgccagcc agacattgct ttagcaccag cacaggtgga acgctcgcct gtgagtacat
     8041 ggatgctgct gccgccggcc ttcaagagag atgagcttgc cctcagcgcg cattccgtgg
     8101 agagctattc cacgtgtccg ctgaaattca agctggagcg cgactggaga attccaggtg
     8161 aggcggccgc caacatgcag tatggggccg cgattcacac cgtgctgcgg cagtactacg
     8221 atccggcgcc gcacgcacct gagctttcga ttgatgatgt tgttgccgcg ttcaggaccg
     8281 agttcaataa agccgttgtc gacgacccgg tacagcgcga gctctatgaa aagcagggtg
     8341 aagagcagat tcgcgcgctg ctggccatca agccgcgtgg ctcgtttgaa gtgattgcag
     8401 cggaagtaaa gtttgaattc accatcgac
//
LOCUS       DASQYP010000398         6562 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_143716, whole genome shotgun sequence.
ACCESSION   DASQYP010000398 DASQYP010000000
VERSION     DASQYP010000398.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 6562)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6562)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6562
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_143716"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1593
                     /locus_tag="VE783_12935"
     CDS             <1..1593
                     /locus_tag="VE783_12935"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX54354.1"
                     /translation="LGSIFSHAVYRNDSGLFTAVVNNLGDLPLHIQATSSFVDGKNLP
                     PQDPTYSGVRFAYPFQCDFLTAMLVKCGASVTAAFWLQNMALALALVGLLHYWTLQLT
                     GNKLAGLIAPVLLLLSGGLGWTFIFDEVRNSESGIVPLLGHLTHDYTINFGPNLRWGN
                     AMTTLLVPQRSILFGMPLALVVFIQWWQVINRGQDQQSARQARVQMIWAGAIAGLLPL
                     IHTHTFLVVMIMGACLALIFHEHLRSWIFFFAAAAIVAVPQVLWLMGAGTIHTSQFFA
                     WQPGWDHGAMNPVWFWFVNAGLFIPVLILAIIWRTEDYTPSRRLLLFYAPFLLCFIGP
                     NLFKLSPWIWDNIKVLIYWYLASLPLVAWFLAMEISRRWGWRWIAVAVLAAMLLSGGF
                     DLIRVLTEASPQEEFNIHALAAAKMIEQQTQPRSVILNAPVYNTPVFLTGRPSVMGYP
                     GWMWSRGLSYQQREADIRDIYAGKPQAGALLRQYGVKYVLVGPQEQSSLTVNDQYWSQ
                     HRLAAQTGEYRLYRIEEERAVR"
     gene            1590..2615
                     /locus_tag="VE783_12940"
     CDS             1590..2615
                     /locus_tag="VE783_12940"
                     /inference="COORDINATES: protein motif:HMM:TIGR02483.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-phosphofructokinase"
                     /protein_id="HYX54355.1"
                     /translation="MKIGILTGGGDCPGLNAVIRAVVRKGIFHYEDQFVGFLEGWRGV
                     LESKTTSLDLKAVAGILPRGGTILRTSRTNPAKRDGGVEQCISNLQKAGVEALIALGG
                     DDTQSVSQRLHEQGYKVVGVPKTIDNDLAGTDLCFGFDTAVSIATEAIDRVHTTAEAH
                     NRVIVVEVMGRDSGWIALYSGISGGADVILLPERPIDLQEVTDRLKRRHDRGSYFSIV
                     VVAEGAKVSDELVVERRKTDEFGHVRLGGIGNVLAAEIEMRTGFETRAVVLGHIQRGG
                     SPTAFDRMLATRYGVGAIDMVHQGKFGCMVALKGNDIRSVPIADAISKNRRVNDDLIE
                     VATSLQD"
     gene            2628..4238
                     /locus_tag="VE783_12945"
     CDS             2628..4238
                     /locus_tag="VE783_12945"
                     /inference="COORDINATES: protein motif:HMM:TIGR03663.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flippase activity-associated protein Agl23"
                     /protein_id="HYX54356.1"
                     /translation="MPGMAQAQPKTSKRKAPQALRRGTPAAASSAAERRCGRFTFWHV
                     GSASVLVFAAFLRLFDLSSKVLHHDEGVNGMFMTNLFRTGYYHYDPANYHGPTLYYAG
                     LVTTTLNAFAYGKYGLSTFAIRLVTATFGIGVVWLSLCLRRYLGTFGSWSAALLATVS
                     SGMVFFSRYFIHEILFVFFTLGTVVAWLKFRETGQSKYLYLAASSLSLLGATKETWII
                     TLAVWLIAIPCTTYYLKFAERALNKRPDMDLEIPPVAPQESRRTLYSTAVIVFVVLWV
                     LFYSSFFTNFPQGVLDSIRTYGYWTKTSGTANIYPWTQDIDWLFRAETGALLLGAAGI
                     IAALVQVRSRFAVFTAFWSMGILAAYCLVPYKTPWLLLSIVLPFLLMSGYLLEQIFAR
                     RGSPVIASLILAVAAGLGLYQGVQVSFFRYDDASQPYSYAHSYRDLLNLVNEVEKIAS
                     GLPEGRNTGITVMSTEHWPLPWYLRFYPNTGFWGKVVPTNEPIIIAHQTQVDEVNREL
                     GSKYRLISSHDLRPGNRLYLYVRKDIQP"
     gene            4396..>6562
                     /locus_tag="VE783_12950"
     CDS             4396..>6562
                     /locus_tag="VE783_12950"
                     /inference="COORDINATES: protein motif:HMM:TIGR03434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HYX54357.1"
                     /translation="MPSLLQDLRYGLRMLRKNPGFALAAIITLALGIGGNTAVFTVTS
                     AMLLKPLPYKDPQQLVSLDVRQKDGQSGCCTLSWTDLIRERNKSFSSTAVAAIDNTNL
                     TGRGEPLQVALGRVSASFFDMLGVKPQLGRTFIAEEGRPEGKPVAVITDSLWHSRFGG
                     DPSIVGQALTLDGTPYTIIGVLPPDVQYPFVGPAEIWIPRYFEYSLFTPQRLRMGVGY
                     LGMYGRLRDGVSRKQALAELSVLHEQYRKENPAAPDADPERSVAIDNLQDSLVANVRT
                     RLIVLTIAVILVLAIACANVASLLLSRAVARRKEIAVRSALGAPRSAIINQLLTESVL
                     LALIAGVVAVGLSWAATRALTVWGASSLPQGIPVALDGRVLIFTVFVSVLTGIIFGLF
                     PALQLASTNVNESLRDESRGASGGRERVRLRGMLVVVQVGLCVLLLIGAGLLIRSFER
                     LLRVDPGLDAHNVITMNVNLPSVKYAKPEQQTMFFDDLLRRVSALPGVRGAAISAALP
                     LSWKRITPILPEGQPEVPLAQRPFIDIEAVSPAWFKTLRVPLKLGREFTDADNAQSPK
                     VVIINETLARRYWPNQNPIGHHLIMGRGPAPSEIVGVAADVKNRGVALDPQAQLYFPF
                     AQIPWGNMNLIVRTANDPHTMVSSLRAQVEAIDPDQPINAVQTVDELMDASRAQPKSF
                     TLLIGGFAGLTLILAIVGIYGVLAYSVAQRRQELGIRLAL"
BASE COUNT         1186 a         2066 c         1900 g         1410 t
ORIGIN      
        1 cttggcagca ttttctccca tgccgtttac cgcaatgact ccgggctatt cactgccgtg
       61 gtgaacaatc tgggcgattt gccgctacac atccaggcga cttcaagttt cgttgacggc
      121 aagaatctgc cgccacagga cccgacgtac tccggcgtgc gcttcgccta tccattccag
      181 tgcgactttc tcaccgccat gctggtgaaa tgcggagcga gcgtgactgc cgccttctgg
      241 ctgcaaaaca tggccctggc actggcgctg gtgggattgc ttcattactg gacactgcag
      301 ctcacgggca acaagctggc aggattgatt gcgcccgtac ttctgttgct gagtggcggg
      361 ctgggttgga cctttatttt tgacgaagtg cgaaacagcg agagcggaat cgtcccgctg
      421 ctcggccacc ttacgcatga ctacaccatc aactttggcc ccaaccttcg ctggggaaat
      481 gccatgacaa cgctgctggt gccgcaacgc agcattctgt tcggcatgcc gctggcgctc
      541 gtcgtattca tccaatggtg gcaggtgatc aaccggggac aggatcagca gtctgccaga
      601 caagcgcgag ttcagatgat ctgggccggc gcaatcgcgg gcctgctgcc gctgattcac
      661 acgcacacat tcctcgtggt gatgatcatg ggcgcatgcc ttgccttgat cttccatgag
      721 cacctgcgca gctggatttt cttttttgcg gcggccgcca tcgtagctgt tccgcaagtg
      781 ctgtggctca tgggagcagg taccattcac accagccagt tctttgcgtg gcaaccagga
      841 tgggaccacg gcgccatgaa cccggtgtgg ttctggtttg tgaacgccgg gctgttcatc
      901 ccggtactga ttctggcgat aatctggcgc acggaagact acacgccctc ccggcggctg
      961 ctgctgtttt atgctccttt cctgctgtgc ttcatcgggc cgaacctgtt caagctctcg
     1021 ccctggatat gggacaacat taaggtcctt atttattggt acctggcttc ccttccgctg
     1081 gtggcctggt ttctggccat ggaaatctct cgccgctggg gctggcggtg gattgccgtg
     1141 gcggtgctgg cagccatgct gctttccggc ggcttcgatc tcatccgggt gcttaccgag
     1201 gcatcgcctc aggaagagtt caacatccat gctctggcag ccgcgaaaat gatcgagcag
     1261 cagacgcaac cacggtcggt gatcctgaac gcgccggtat ataacacgcc ggtgttcctg
     1321 acgggccggc cgtcggtgat gggctatccg gggtggatgt ggtcgcgtgg cttgagctac
     1381 cagcagcgtg aggccgacat acgcgacatc tacgcgggca agccacaggc cggggcgctc
     1441 ctccggcaat atggggtgaa gtacgtgctg gtggggccgc aggagcaaag ctcgctgacc
     1501 gtgaatgacc agtactggag tcagcatcgg ctggccgcgc agaccggcga gtaccgttta
     1561 tataggatag aagaggagag ggcagttcga tgaagatcgg gattcttacg ggcgggggcg
     1621 attgccccgg cctgaacgca gttatcaggg cggtagttcg caagggcatt tttcattacg
     1681 aagatcagtt tgttgggttt ctggaaggat ggcgcggcgt gcttgagagc aagaccacct
     1741 cgcttgacct gaaagcggtg gctggaatcc tgccgcgcgg tggcacgatt ctgcgaacgt
     1801 cgcgtaccaa cccggcaaag cgcgatggtg gagttgagca gtgcatcagt aacctgcaaa
     1861 aagccggcgt ggaggcgctg atcgccctcg gcggcgacga tacgcagtcg gtctcgcaga
     1921 ggctgcatga gcaaggttac aaagtcgtcg gcgtaccgaa gacgatcgac aacgatctgg
     1981 ccggaaccga cctgtgcttc ggattcgaca cggccgtgag catcgccaca gaggccattg
     2041 atcgtgtgca tacgactgct gaagcccaca accgggtgat tgtggtagaa gtcatgggcc
     2101 gcgactctgg atggatcgcg ctctacagcg gtatctccgg aggcgctgat gtcatcctgc
     2161 tgccggagcg gcccattgat ctccaggaag taacggacag actcaaacgg cggcacgacc
     2221 gtggaagcta cttcagcatt gtggtggttg ccgaaggagc gaaagtttct gacgagttgg
     2281 ttgtagagcg gcgcaagacg gacgagttcg gtcacgtgcg gctgggcggc atcggcaatg
     2341 tgctggcggc ggagattgag atgcgcacag gctttgagac gcgcgccgtg gtgctgggac
     2401 acattcagcg gggcggttcg cccactgcgt ttgaccgcat gctggccacc cgctacggcg
     2461 tgggcgcaat tgacatggtg catcagggca agttcggctg catggtggcg ctcaagggca
     2521 atgacattcg ttcggtgccg attgcagatg ccatctccaa gaaccggcga gtgaacgatg
     2581 acctgattga agtagccacc agcctccagg actagcgctg atataagatg cccggcatgg
     2641 ctcaggccca gcccaaaacc agcaagcgta aagcgcctca ggcgctgcgc cgggggactc
     2701 ccgctgccgc ttcttctgcc gcggagcgtc ggtgcggccg gttcaccttc tggcatgtgg
     2761 ggtctgccag cgtgctggtc ttcgcggcat ttctgcggct gtttgatctc tcctccaaag
     2821 tcctgcatca cgatgaaggc gtgaacggaa tgttcatgac caacctcttc cggacgggct
     2881 attaccatta cgatcccgcc aactatcacg gcccaacgct ctactacgcc ggattggtca
     2941 ccaccacgct caacgcgttc gcctacggca aatacgggtt gagcacgttc gccattcgcc
     3001 tggttacggc gacattcggc ataggcgtgg tctggctcag tctctgcctg cgccggtatc
     3061 tcgggacgtt cggctcctgg tcggcggcgc tgctggccac tgtttcttcc ggcatggtgt
     3121 tcttttcgcg ctactttatt catgaaatcc tgttcgtgtt ttttaccctt ggaacggtgg
     3181 tggcatggct caagtttcgc gagaccggcc aatcgaagta cctttatctg gcggccagtt
     3241 ccctctcgct tctcggcgcg accaaggaaa cgtggatcat cactctggcg gtctggctca
     3301 tcgcgattcc ctgcaccacc tattacctca agttcgcgga gcgcgcactg aacaagcggc
     3361 ctgatatgga ccttgagatt ccgccagttg ccccgcagga aagccggcgc accctttatt
     3421 ccacggccgt gatcgtgttc gtggtgctgt gggtactttt ctattcatcg ttcttcacca
     3481 actttcccca gggcgtgctt gattcgattc gtacttatgg ctactggacg aaaaccagcg
     3541 gtacggccaa catctatccc tggacccagg acatcgattg gctgttccgc gcggaaaccg
     3601 gtgcgctgct gctgggcgct gccgggatca tcgccgcact agtgcaggtg cgcagccgtt
     3661 ttgccgtttt caccgccttc tggtccatgg gcatactcgc cgcttactgc ctggttccct
     3721 ataaaactcc gtggctgctg ctgagcattg tcctgccttt ccttcttatg tcgggctatc
     3781 tgctggagca gatctttgcc cgccgcggat cgcctgtaat tgcctcgttg atcctggccg
     3841 ttgccgcggg cctgggactg taccagggtg ttcaggtcag cttcttccgc tatgacgacg
     3901 catcccaacc gtacagctac gctcattcgt atcgtgacct gctgaacctg gtgaacgagg
     3961 ttgaaaaaat cgcctccgga ttgcccgaag gacgcaacac cggaatcacc gttatgtcca
     4021 ccgagcactg gccgctgccc tggtatctgc gcttctatcc caacaccggc ttctggggaa
     4081 aagtggtgcc caccaatgag ccgatcatca tcgcccatca aactcaggtc gatgaggtca
     4141 accgcgaact tggcagcaag taccgcctga tcagctcgca tgatctgcgt ccgggaaacc
     4201 ggctgtacct ttatgtgcgg aaggatattc agccgtgaac gccgaagtcg cagttccggg
     4261 agcattgcaa ctccggccga actcgtctgt acggtggaac atcgagctgc cgattttcga
     4321 cagttccgat cacccgatct ccccatcacc agatcacccg atttgcaccc tgccgctcgt
     4381 cttataatct cctccatgcc ctccctcctt caggaccttc gctacggtct gcgcatgctg
     4441 cgcaagaatc ccggattcgc tctggccgcg atcattactc tggcgctggg aataggcggc
     4501 aacaccgccg tcttcaccgt aaccagtgcc atgctgctta agccgctgcc gtacaaggac
     4561 ccgcaacagc tcgtgagcct tgacgttcgt caaaaagacg ggcaaagcgg atgctgcact
     4621 ctctcctgga ctgacctcat ccgcgaacgc aacaagtcgt tctcctccac ggctgtcgcc
     4681 gccatcgaca acaccaatct caccggccgc ggtgagccct tgcaggtggc cctcgggcga
     4741 gtgtcggcca gcttctttga catgctcggc gtcaagccac aactgggccg cacattcatc
     4801 gccgaagaag gccgccctga aggaaagccg gtcgccgtaa tcaccgattc gctctggcac
     4861 tcacgcttcg gcggcgaccc cagcatcgtg ggccaggcgc tcacgctcga cggcactcct
     4921 tacaccatca ttggcgtact gccgccagac gtgcagtatc catttgtcgg cccggctgaa
     4981 atctggatac cgcgctactt cgagtactca ctcttcactc cacagcggct gcgcatgggc
     5041 gttggctatc tgggaatgta cggccgcctg cgtgacggtg tgagccgcaa gcaggcgctc
     5101 gccgaacttt ccgtcctgca cgagcagtat cggaaagaaa accccgccgc gcctgacgcc
     5161 gatcccgagc gctccgtcgc catcgataac ctccaggact ccctcgtcgc caacgtgcgc
     5221 acccggctga tcgtcctgac cattgccgtc attctggttc tggccatcgc gtgcgccaac
     5281 gttgccagcc tccttctttc tcgcgccgtg gcgcggcgca aagagattgc cgtccggtcc
     5341 gccctcggcg cgccacgcag cgccatcatc aaccagttgc tcacggaaag cgttctgctg
     5401 gcactcatcg ccggagtcgt agcggtgggc ctgagctggg ccgcgacgcg tgcgctcacc
     5461 gtttggggag caagcagcct gccccagggg atccccgtcg cgctcgatgg ccgcgtgctc
     5521 atcttcaccg tattcgtctc agtgctcacc ggcataatct tcggcctctt ccctgcctta
     5581 cagctcgcat ccaccaacgt gaatgaaagc ctccgcgatg aaagccgcgg cgccagcggt
     5641 ggccgtgaac gcgtccggct gcgcggcatg ctggtcgtcg tccaggtggg actctgcgtg
     5701 cttctgctga tcggcgccgg cctgctcatt cgcagctttg agcgcctgct ccgcgttgat
     5761 cccggcctcg acgctcacaa cgtcatcacc atgaacgtca acttgcccag cgtgaagtac
     5821 gccaagccgg agcagcagac catgttcttt gacgatctgc tgcgccgcgt ttccgcgctg
     5881 cccggcgttc gcggtgcggc aatttcggcc gcgctgcccc tgagctggaa acgcatcacg
     5941 cctatcctgc cggaaggcca gccggaagtc ccgctggccc aacgtccgtt tatcgacatt
     6001 gaggccgtca gtccggcgtg gttcaaaact cttcgcgtcc cgctgaagct cggccgcgag
     6061 ttcactgacg ctgataacgc ccagtccccc aaagtcgtga tcatcaacga gactctggcc
     6121 cggcgctact ggcccaacca gaacccgatt gggcatcacc tcatcatggg tcgcggccca
     6181 gccccgtcag agatcgtcgg tgtcgctgcc gacgtgaaga accgaggtgt cgctctcgat
     6241 ccccaggccc agctttattt cccgttcgcc cagattccct ggggcaacat gaacctgatc
     6301 gtgcgcaccg ccaatgatcc ccacaccatg gtgtcttcgc tccgggcgca agtggaagcc
     6361 attgaccctg accagcccat caacgccgtg cagacagttg acgagctcat ggacgcctcc
     6421 cgcgcccagc ccaagtcctt caccctgctc atcggcggct tcgccggcct caccctgatc
     6481 ctcgccatcg tcgggatcta tggcgtgctg gcctattccg tcgcgcagcg ccgccaggag
     6541 ctgggcatcc ggctcgcgct cg
//
LOCUS       DASQYP010000399         6225 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_61520, whole genome shotgun sequence.
ACCESSION   DASQYP010000399 DASQYP010000000
VERSION     DASQYP010000399.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 6225)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6225)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6225
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_61520"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(139..1329)
                     /locus_tag="VE783_12955"
     CDS             complement(139..1329)
                     /locus_tag="VE783_12955"
                     /EC_number="2.8.3.-"
                     /inference="COORDINATES: protein motif:HMM:NF014564.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HYX54358.1"
                     /translation="MQKSAPLAGIRVIDFGRFIAGPYCAMLLADMGADVIRVDRRQGS
                     EDRYIAAVTDTGEGGGFLSLNRNKRNLTLDTAKPQSAEIIRRLVKSADVVVANLPVNV
                     MKGMGLDYDALRAIRPDIILARISTFGPDGPYGNRVGFDTVAQAMCGAMSLTGFPGTP
                     VRSLVPFADFGTALHTAFGVMVAIYHRSRTGQGQVVDGSLLATSITFMQGMLAERSVL
                     GIERRQLGNTSFYAAPSDTYRTTNGCIVVSVVGNDMFARWAQLVGHPEFVSDPRFAGD
                     QLRADNRAPIEQAMNEWLASRTTEQAITELEKARIPAGPVLELAQVLEDPQVKARELL
                     KYVDHPGAPRPVPLAQTAVRLSATPPEIRCRAALLGEHTDEVLREIGYSEDDITELRR
                     KEVV"
     gene            1708..5214
                     /locus_tag="VE783_12960"
     CDS             1708..5214
                     /locus_tag="VE783_12960"
                     /inference="COORDINATES: protein motif:HMM:NF024180.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CHAT domain-containing protein"
                     /protein_id="HYX54359.1"
                     /translation="MADLPVVSIRWQLDSVSAPPPGRRSVASATVDTHLARVVGDRFE
                     VEKEFRATSPQRRGAEPLPPMDVTIPAEPGAVYLLAVRQEGSGALSFHAPKAQPERRG
                     IATGATQSTVTFEVQFAEDVNEGVRRSIISKVVKAVVLKAVGKFADLTVPWIGSKVEE
                     FIWNKKGLQRGWLQVTPDTLKSGNLQPADFSKIANTTDRCLLLLHGTFSNAAGAFQGL
                     TNTKGAGARDFFSALTPVYGDRIFAFNHFTVSQTPEQNAQDLISTLPKQAKFDVITHS
                     RGGLVLRNLVERQAALGATASNFQLGKAVLVASPNIGTQLATADRFESLISWWTNILE
                     LFPENPFSTTIEYIGEALNFIARHVVDALPGLESMDMAGSQISTLNQPPGPPVEAYST
                     ICSNYQPKGSVLARMLDLGIDGIFGTANDLVVPTTGAWKTDAHADWVAANRIGCFGLN
                     LASASAAGGVIHTTYFSQPETVDFLANTLLGQSLGLAVVDLDANPPFFLRRSVADAIA
                     ANRVAAVSSVAEPLPTSRESQGFLPTALNEADNILQLFLISPDDHLPADAAKLTKGRT
                     AILLATYRNARVVETIYLRRPKKLKATKNEGDETSEADPGATDYHWNKIIGINESIKS
                     YVDGGGQGLPSEDDLLDLGVNLFNAMFPGSVRRLYDVARVDRERAADHRRLDIVITSM
                     INWVADKPWEFAYDPNRQSFLATEAANFTRNVLTAVPADEFQAHPGKPLRILVVVAQP
                     VGMGLLSAGEEEQVVRRGFQELEELGLVQVEYMLRTCIEELHERLRNPDVDILHFIGH
                     GTYKDDKKEGYLVFESPDGGMQLISAENLRQVLCQRGIRLLFLNACETGMVGRAQMKF
                     DFNRGVAPKLVAGGIPVLVANQYKVLDVSATEFAKHFYRWLALGSTVGDAAREARVAV
                     NYSIAGETIDWAVPVVYARNPGRMIYTPEEKDHVAALWKGSHAQRTAPCRGFKGVKVG
                     LWDVNHVLPRLDSFAEQLNAAQTGFCFRTVDVSAPLGTWRRRAIADKGAYINGEEVAR
                     KLQDHVVSLGVDHLICITSFGLADRVDSGLALWNQDPNQRVAIISTELMLDEGSDPGD
                     AMNRFLADLLVSALCGETGHTIPPTDCPNYYPEKIAEADPKERRVTLSAAHKLCPQCC
                     TELAKKLPPDQIEAMNKILTTW"
     gene            5323..5742
                     /locus_tag="VE783_12965"
     CDS             5323..5742
                     /locus_tag="VE783_12965"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX54360.1"
                     /translation="MTAARFVIAVISALAGVCFAAIAALSIRAAAFPARRFHVFSIVI
                     AVLAICLVLLAFRAALTAGAAHEDAIAMALRRGMLGAFVGLIAIFVALVMFGDETRSF
                     LAHALNRHTSTFTTFPLLVVSVLLGFGAGFVIRRPER"
     gene            5917..>6225
                     /locus_tag="VE783_12970"
     CDS             5917..>6225
                     /locus_tag="VE783_12970"
                     /inference="COORDINATES: protein motif:HMM:NF013755.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX54361.1"
                     /translation="MLIQTQAELSALAKRLEPEKVLAVDTEFASEGRYYAEPAIMQMA
                     TRTEAMLVDLLAVRDISPLHALLLDPAVTKVFHAGKQDLDIFYRLIGRPVVNVFDTQM
                     A"
BASE COUNT         1296 a         1807 c         1890 g         1232 t
ORIGIN      
        1 aaacttaccg caagatctca gcgcgaggat ttaccacaca ggacacaaag aaacaccaag
       61 aaatctgttt ctttctttgt gatccttcgt gaccttggtg gttaatttcg gccgtacttg
      121 gccaacagcg gaatggcttc acactacttc ttttctgcgc agctcagtaa tgtcgtcctc
      181 tgaatagccg atctcgcgca atacttcgtc agtgtgttct cccagaagcg ccgcacggca
      241 gcggatttcg ggcggcgtgg cggagagccg gaccgcggtt tgcgccagcg gaaccggcct
      301 gggcgcgcca ggatggtcga catacttcag cagctcccgc gccttcacct gcggatcttc
      361 gagcacctgt gccagttcca gcaccggccc ggcggggatg cgggccttct ccagctcggt
      421 aatcgcctgt tcggtagtgc gcgaagcgag ccattcattc attgcctgtt caataggtgc
      481 gcggttgtcg gcgcgaagct ggtcgccggc aaaacgcgga tcgctcacga actcgggatg
      541 tccgacgagt tgcgcccagc gcgcgaacat gtcatttccc acaacggaaa cgacgatgca
      601 gccgttggtg gtgcggtagg tgtcagaggg cgcggcgtaa aagctggtgt tgcccaactg
      661 gcggcgctca attcccagaa ctgaccgctc tgccagcatc ccctgcatga aggtgatgct
      721 agtagccagc aaagatccat ccaccacctg gccctggccg gtccgtgagc gatgatagat
      781 cgccaccatc accccaaacg cggtgtggag cgcggtgccg aaatccgcaa agggaacaag
      841 cgagcgcacg ggcgttccag ggaatccggt gaggctcatt gcgccacaca tcgcctgcgc
      901 cacggtatca aagccgacgc ggttgccgta agggccgtcc ggaccaaaag tggagatgcg
      961 ggcgagaata atgtccggcc ggatcgcgcg cagagcgtcg taatcgagcc ccatgccttt
     1021 catcacgttc accggcaggt tggcgactac gacatccgcg cttttcacca gccggcggat
     1081 gatctctgcg gattgcggtt tcgcggtatc gagcgtgagg ttgcgcttgt tgcgattcag
     1141 cgaaagaaag ccgccgcctt cgccagtgtc agtaacggcg gcgatataac gatcttcgct
     1201 gccctggcga cgatcgaccc gaatcacgtc cgcgcccatg tccgccagca gcatggcgca
     1261 atacggcccg gcaatgaagc ggccaaaatc aatgacgcgg atgccggcga gtggagcgga
     1321 tttctgcatc gcggaattct aaatgagtga agcctccagt tgttgcgagc ccgcaccggt
     1381 cgaagtcccg tgatgaacac agagagactg tgcgcgagcg attcggaaga gcgggctgag
     1441 ggctgctgga gaacggcttc caggccggag cgaatctcat ttgccttccc gagccgggat
     1501 tgtgctggcg tgaagttcag cgtagctgcc ataactgcgg atttcaaaac atcgctttgc
     1561 agcttaaatt ctcctaattt ctacaaatcg ctgtttatca ggctagaaat agaagataat
     1621 tttgcggcaa ttatctaccc gagcgcataa agaactcgag cgaacgccca ttgtgagcgc
     1681 gaccgctccc agaaatggag agccaccatg gctgatcttc ctgttgtaag cattcgatgg
     1741 caactggatt cggtttcggc cccgccaccg ggacggcgat cggttgcttc ggcgactgtc
     1801 gacacgcatc ttgcacgagt tgtcggcgac cgattcgagg ttgaaaagga attccgcgcc
     1861 accagcccgc agcggcgcgg cgcagagcct ctgccgccga tggacgtgac aataccggcc
     1921 gagcccggag ccgtgtacct gctggcggtg cggcaggaag gatcaggcgc gctctcgttt
     1981 cacgctccta aagcgcagcc ggaacgtcgc ggcatcgcga ccggagccac tcaaagcaca
     2041 gttacctttg aagttcagtt cgccgaagac gtgaacgaag gcgtccgccg gtcaatcatc
     2101 agcaaggtgg tcaaggccgt ggtgctgaag gcggtgggga agttcgcgga cctgacggtg
     2161 ccgtggatcg gatccaaagt agaagaattc atctggaata agaaaggtct gcagcgcgga
     2221 tggctgcagg tgacgccgga taccctaaaa tcgggcaatc tccagccggc cgatttctcg
     2281 aaaattgcga acaccacaga ccgttgcctg ctcctgctcc atggcacctt ctctaatgca
     2341 gcgggggcgt tccagggatt gacgaataca aagggggctg gggcgcgcga tttcttcagc
     2401 gcgctcacgc cggtctatgg cgaccggatt ttcgccttca accacttcac ggtgagccag
     2461 acccctgagc agaacgcgca ggacctgatt tctacattac cgaagcaggc gaaattcgac
     2521 gtgattaccc attcgcgagg cggactcgtg ttgcggaacc tagtagagag gcaggccgcg
     2581 ctgggagcaa ccgcttccaa tttccagctt gggaaggcgg ttctggtagc atcgccgaac
     2641 atcgggacgc agcttgccac ggcggaccgc ttcgagtctc tgatcagctg gtggacaaac
     2701 attctggagt tgttcccgga aaatcctttc agcaccacca tcgaatacat tggcgaggcg
     2761 ttgaacttca tcgcacgcca cgtggtggat gcgcttccgg gactggaatc catggacatg
     2821 gccggaagcc agatctcaac cctgaatcag ccgccgggcc cgccggtgga agcatactcc
     2881 accatctgct cgaactatca gccaaagggc agcgtgctcg cgcgcatgct ggaccttggc
     2941 attgacggca tcttcgggac ggccaacgat ctggtggtgc ccaccaccgg cgcctggaag
     3001 actgacgctc acgccgactg ggttgccgcc aaccgaattg gctgttttgg cctgaatctg
     3061 gcaagcgcct cagcggcagg cggggtgatt cacacgacct atttttcgca accagagacc
     3121 gttgattttc tcgcgaacac gttgcttggg cagtcactcg gcttagctgt ggtggatctg
     3181 gatgcgaatc ctcccttctt cctgcggcgc agcgttgccg acgcaattgc ggccaatcgc
     3241 gtggctgcgg tgtcgagtgt ggcagagcct ttgcccacct ctcgcgaatc gcagggattt
     3301 ttgcctacgg cattgaacga agctgacaac attctgcagt tatttctgat ttctcccgac
     3361 gaccacctgc cggcagacgc agccaaatta accaaaggca gaacggcgat cctccttgct
     3421 acgtaccgga atgcacgtgt ggtggagaca atttacctac ggcgtcccaa gaagctgaag
     3481 gctacgaaga atgagggcga cgagaccagc gaggccgatc caggcgcgac cgattaccat
     3541 tggaacaaaa tcatcggcat aaacgagagc atcaagagtt acgtggatgg tggaggacaa
     3601 ggcctgccca gcgaagacga cctactggac ctgggagtga accttttcaa tgccatgttc
     3661 cccgggtcag tacgccggct gtacgatgtg gcgcgagtgg atcgcgagcg ggcagccgac
     3721 cacaggcgtc tcgatatcgt gatcacctcc atgatcaatt gggtggcaga caaaccatgg
     3781 gaatttgcct atgaccccaa ccggcagagc tttctagcca ccgaggcggc aaatttcacg
     3841 cggaacgtgc ttacggccgt gccggcggat gagttccagg cgcatccggg aaagccgctg
     3901 cggatcctgg ttgtggtggc gcagccggtg ggcatggggc tgctctccgc gggggaagaa
     3961 gaacaggtgg tgcgccgcgg gtttcaggag ctggaggaac tgggcctggt gcaggtggag
     4021 tacatgctgc ggacctgcat cgaagagcta cacgaacggc tgcggaaccc tgatgtggac
     4081 atcctgcact tcatcggcca tggcacatac aaggacgata aaaaagaagg ctacctggtc
     4141 ttcgagagtc ctgatggcgg gatgcagctg atcagtgcgg aaaacctgcg ccaagtcctg
     4201 tgccagcgcg gaattcggct gctcttcctc aacgcctgcg aaaccggcat ggtaggccgg
     4261 gcccagatga agttcgattt caatcgcggg gttgcgccca agctggtagc cggcgggatt
     4321 cccgtgctgg ttgcgaacca atacaaggtg ctggacgttt cagccacgga gttcgcgaag
     4381 cacttttacc gctggctggc gctgggcagc accgtgggtg acgcggcgcg cgaagcacgc
     4441 gttgcggtca actattccat agccggggaa acaatcgact gggccgtccc ggttgtctat
     4501 gcacgaaatc caggccgcat gatctacacg ccggaggaaa aggaccacgt tgccgcgctc
     4561 tggaagggaa gccatgcgca gcgcaccgcc ccgtgcagag gcttcaaagg cgtgaaggtc
     4621 gggctctggg acgtgaatca tgtgcttccc cgcctcgata gcttcgccga gcagttgaat
     4681 gcggcgcaga ccggattttg tttccgcacc gtggatgtct cggcaccgct gggcacgtgg
     4741 cggcggcgcg ccatcgctga caaaggcgct tacatcaacg gtgaagaggt ggccaggaaa
     4801 cttcaggacc atgtggtaag ccttggagtg gaccacctga tctgcatcac cagcttcggg
     4861 cttgccgaca gggtggacag cggcctggcg ttgtggaacc aggacccgaa ccagcgcgtg
     4921 gcgattattt ccacggagct gatgctggat gagggcagcg atccaggaga tgcaatgaac
     4981 cgctttctgg ccgacttgct cgtctccgca ctctgtggcg aaaccggcca cacgatcccg
     5041 cccacggact gccctaatta ttatccggag aagatcgccg aggctgatcc gaaagagcga
     5101 cgggtaacgc tttcagcggc ccacaagctt tgtccgcagt gttgtaccga attagcgaag
     5161 aaactaccgc ctgaccaaat tgaagccatg aacaaaatcc tgacaacctg gtaacaaccg
     5221 gctgcctggc gtgttcgcgt atagtcgctg tggccgcacc ggctgggacg gcagagcagc
     5281 caaagcgcgt gagtgcataa taggtgtgcg gaggcgaacg atttgactgc cgcacgattc
     5341 gtgattgctg tgatcagcgc gctggcgggc gtgtgctttg ccgcgatcgc ggcattgagc
     5401 atccgggctg cagcctttcc ggcgcggcgg tttcacgtgt tctccatcgt cattgctgtg
     5461 ctggcgattt gcctggtctt gctggcgttc cgagccgcgc tcacagcagg cgccgctcat
     5521 gaagacgcga ttgccatggc tttgcgtcgc gggatgctgg gagcgttcgt ggggctcatc
     5581 gccatctttg tcgcgctcgt catgttcggc gacgagaccc gcagttttct ggcccacgcg
     5641 ctgaaccggc acacttccac cttcaccacg tttcctctgc tggtggtctc ggtgcttctc
     5701 ggctttggag cgggctttgt cattcggcgt ccggaacgat aaagcgttca ccgcaaagga
     5761 ttctttgcca ctgatcaaca gcgataaaca ctgaggaggt acttggctcg ttcgcatcag
     5821 cattgatctt ctgcaatacg tgcgccgcgt gtagcacgcc cgctttgttc cactccaccc
     5881 cacccactaa aatttctgtc gagacgaaaa ttcaaaatgc tgattcaaac ccaggcagag
     5941 ctctccgcgc tggcaaagcg gctggaaccg gaaaaggtgc tagccgttga caccgagttc
     6001 gccagcgaag ggcgctatta cgccgagccg gcaatcatgc agatggccac ccgcaccgag
     6061 gccatgctgg ttgacctgct ggccgtgcgc gacatttcac cgcttcacgc gctgctgctg
     6121 gacccggcgg tcaccaaggt gttccacgcc ggcaagcagg acctggacat cttctaccgg
     6181 ctgatcggcc ggccggtggt gaacgtcttt gacacccaga tggcc
//
LOCUS       DASQYP010000400         4755 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_61898, whole genome shotgun sequence.
ACCESSION   DASQYP010000400 DASQYP010000000
VERSION     DASQYP010000400.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 4755)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4755)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4755
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_61898"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..581
                     /locus_tag="VE783_12975"
     CDS             <1..581
                     /locus_tag="VE783_12975"
                     /inference="COORDINATES: protein motif:HMM:NF012964.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004325 - ferrochelatase activity
                     [Evidence IEA];
                     GO_process: GO:0006783 - heme biosynthetic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ferrochelatase"
                     /protein_id="HYX54362.1"
                     /translation="YRKALMAEMKPEIQVQFVEAWHENPLLIQAYAEKLAPVWKKASD
                     ELGQPAPVIFTAHSVPMRTIQAGDPYEEQTRETAKLVGEKIPGLSHKLQQFAFQSQGM
                     SGGPWLGPTVESAILEAKRQGHKGVVIAPIGFVCDHVEVLYDVDIGFKQFAAEQGMKL
                     WRPESLNTSPTFISALAQLANSRLHVASGAMS"
     gene            585..1970
                     /gene="hemG"
                     /locus_tag="VE783_12980"
     CDS             585..1970
                     /gene="hemG"
                     /locus_tag="VE783_12980"
                     /EC_number="1.3.3.4"
                     /inference="COORDINATES: protein motif:HMM:TIGR00562.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004729 - oxygen-dependent
                     protoporphyrinogen oxidase activity [Evidence IEA];
                     GO_process: GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protoporphyrinogen oxidase"
                     /protein_id="HYX54363.1"
                     /translation="MRRVAIIGGGIAGLSAAFYLERARGGGARLDWALFEKSDRLGGV
                     IRTELREGYVLEAGPDSFLTMKPDGAQFCRDLGIGDQLIASNDAERKTYIVVKGRMIP
                     IPDGLEFMVPTRVLPMVTTPLFSFGTKLRMASELFAPGGNHREDESVADFVRRHFGQE
                     MVDRVAEPLLAGVYGGNADKMSVRAVLPRFAEMERESGSLVRASLKARKVRAKSPGAK
                     PAPLFTSLKNGVQQMVDAAVAQLPPDHLRLGTQVTALKPVGEDWEIQCGGRTERFQSI
                     ILATPAPAAAALLRQFNPALIEGLSQIQYSSSAAVVLAYGGLPLPAGHGFLVPRTEGR
                     KMLACTFVHKKFNYRAPEGDCLLRCFISSSRVPELLTYSDDQLQSLALAELKDLLGLT
                     AAPKFARVFRWDCALPQYETGHLERVATMETILAEIPGMHLVGNSFHGIGIPDCIRSG
                     RKAAEQIISSS"
     gene            complement(1954..2421)
                     /locus_tag="VE783_12985"
     CDS             complement(1954..2421)
                     /locus_tag="VE783_12985"
                     /inference="COORDINATES: protein motif:HMM:NF016152.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MmcQ/YjbR family DNA-binding protein"
                     /protein_id="HYX54364.1"
                     /translation="MPAYLDWIREFCLSLPHATEKVQWGHDLLFCVGSKMFCVANMEP
                     REGQTTIAFKCTDEKFAELIEIEGIIPAPYMARNKWVAFTEITALRQPEIRQLIQESH
                     AMIFAKLPKGVQTELTGAGAVQAKRKKGPSTKKKISAPKKRSAAKKTITKRKK"
     gene            complement(2463..3023)
                     /locus_tag="VE783_12990"
     CDS             complement(2463..3023)
                     /locus_tag="VE783_12990"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX54365.1"
                     /translation="MSRTLRLHLAIFALLAALVSGVQAQTQPSQPSQDKGQSDQQAQP
                     GAQDQQQGPHGRGPRARRAARRHNMQELAQKLNLTDDQKKQFQQIRQNAMEQAKAIHN
                     DSSLNQDQKREKQMALRKQSHQEMFKVLTPEQQAQLKQMREEHKQKMQPKKGETDKSS
                     STIGGSGDDDPFAGMVSDDDDGARAY"
     gene            3149..3919
                     /locus_tag="VE783_12995"
     CDS             3149..3919
                     /locus_tag="VE783_12995"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX54366.1"
                     /translation="MKAAILALSLGLLAGRVWAQEHHHDDGPAGELNAATQAMEHHHH
                     NGPHMHMSTLRPAQPGDQQKADAIVEQTRQAMEKYRDYQAALADGFRIFLPNVPQKMY
                     HFTNYGNAFNAAFNFDPSKPTSLLYEKIGDGYKLIGAMFTAPVGFTEDQLNQRVPLSV
                     AQWHQHVNMCKAPQGRGIEMLGKNPQFGLNGSISTREECEAAGGTFMPHVFGWMVHLY
                     PWEKTSDQIWSVERQLQDKPASSEHQHHDHGMMAAEQK"
     gene            complement(3938..>4755)
                     /locus_tag="VE783_13000"
     CDS             complement(3938..>4755)
                     /locus_tag="VE783_13000"
                     /inference="COORDINATES: protein motif:HMM:NF024430.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF3891 family protein"
                     /protein_id="HYX54367.1"
                     /translation="WTDRKTAAELPMILRPLESRTAQALSSDFQPAWSVVEKIQKQQY
                     PSCWLVTQPSHAALAGEMAARLNAPAVPKMEAELIRAIALHDAGWGMPDAQVVMRSRT
                     GQLKNPQSFLQCSVQEFLAAWTQSIDIAQSTSPAGGYMVSRHFWRLAEHRLKSAQDQA
                     QDRKALEGFTSRESDRQTELARKQKRSAAELEQLTDVLQFCDLLSLYVCCGSNESVEF
                     PEFCGAKVRITGNANQYRMSPNLMEPGSKFLLAALLHPARKDRSGEEIQVAFD"
BASE COUNT          934 a         1341 c         1426 g         1054 t
ORIGIN      
        1 tttacaggaa agcccttatg gcggagatga agccggaaat ccaggttcag tttgtggaag
       61 cctggcacga gaatccgctg ctgattcagg cgtacgcgga aaagcttgct ccggtgtgga
      121 agaaggccag cgatgaactg ggccagcccg caccggtgat ttttaccgcg cacagcgtgc
      181 cgatgcgcac cattcaggcc ggcgacccct acgaggagca gacccgcgaa accgcaaagc
      241 tcgtcggaga aaagattccc ggcctgagcc acaagctgca gcagtttgcc tttcagagcc
      301 agggcatgtc aggcgggcca tggcttggcc ccacggtgga aagcgcgatt ctggaagcaa
      361 aacgccaggg ccacaaaggc gtagtgatcg cgcccattgg gttcgtgtgt gaccacgtgg
      421 aagtgctcta cgacgtagac atcggattca aacagttcgc ggcagagcag ggcatgaagc
      481 tgtggcgacc ggagtctctc aacacatctc ccacatttat ctctgctctg gcacagctgg
      541 ccaacagccg cctgcacgtg gcttcaggag ccatgtcata aatcatgcgc cgtgtagcca
      601 tcatcggcgg cggaatcgcg gggctgagcg cggcattcta tctcgaacgt gcacgcggtg
      661 gcggagcgcg tcttgactgg gcgctgtttg aaaaatctga ccggctcgga ggtgtgatcc
      721 gtacggagct gcgcgaaggt tacgttctgg aagccggccc tgattccttc ctcaccatga
      781 agcccgatgg cgcgcagttt tgccgcgatc tgggcatcgg cgaccagctc atcgcttcga
      841 atgacgcgga gcgcaagacc tacatcgtgg taaagggccg gatgattccc atccccgacg
      901 gccttgagtt catggttccc acacgcgtgc tgcccatggt caccacgccg ctgttttcct
      961 tcggaaccaa gctgcgcatg gcgagcgagc tgttcgcgcc aggcggcaat catcgtgaag
     1021 atgaatcggt ggccgatttt gtgcggcggc acttcgggca ggagatggtg gaccgtgtgg
     1081 ccgagccgct gctcgcaggt gtgtatggtg gcaatgccga caagatgagc gtacgcgccg
     1141 tgctgccccg ctttgctgag atggagcgcg aaagcgggag cctggtgagg gcaagcctga
     1201 aggcccgtaa ggtccgggcg aaatctccgg gggcaaaacc agccccgctt tttacttcgc
     1261 tgaagaatgg cgtgcagcag atggtggatg cggcggtggc gcagcttccg cccgatcatc
     1321 tgcggctggg aacgcaggtg actgcgctta agccggtcgg cgaggactgg gaaatacagt
     1381 gcggcggccg caccgagcga ttccaatcca ttattctggc tacgcctgcg ccggctgcag
     1441 cggcgctgct gcggcagttc aatcccgctc tgattgaagg actctcgcaa attcagtaca
     1501 gctcgtcagc ggcagtggtg ctggcttatg gcgggcttcc gcttccggca gggcacgggt
     1561 ttttagtgcc gcgaacggaa ggccgcaaga tgctggcctg cacctttgtt cacaagaagt
     1621 ttaactatcg tgcgccggaa ggcgactgcc tgctgcgctg cttcatctcc agttcgcgcg
     1681 taccggagtt gctcacttac agtgatgacc agctgcaatc gttggcattg gccgaactga
     1741 aagacctgtt gggactcacc gccgccccaa aattcgcgcg tgtgttccgc tgggattgcg
     1801 cccttccgca gtatgaaacc ggacatctgg agcgcgtggc gacgatggaa acaatattgg
     1861 cagaaattcc cggtatgcac ctggtgggga attcatttca cggaatcggc attccagact
     1921 gcatccgttc cgggcgcaaa gcggcggagc agatcatttc ttcctcttag taatcgtctt
     1981 tttcgcggct gagcgcttct tcggtgcaga tattttcttt ttcgtagatg gccctttctt
     2041 ccttttggcc tgtacagctc cggctccggt cagctccgtc tgcactccct tgggaagttt
     2101 ggcgaagatc atcgcgtgtg attcctgaat cagctgcctg atctcgggct ggcgcagagc
     2161 cgtgatttca gtgaaggcta cccacttgtt gcgagccata taaggcgcgg gaatgatgcc
     2221 ttcaatctcg atgagctcgg caaatttctc gtctgtacat ttgaaggcga tggtggtctg
     2281 gccttctcgc ggctccatgt tggcaacgca aaacattttg ctgccgacgc agaagagcag
     2341 gtcatggccc cactgcactt tttcggttgc gtgcggaagt gaaaggcaga actccctgat
     2401 ccaatcaaga taagcgggca tcgcgcaggt actatagctg aagctgcgat gcccttgcca
     2461 gattagtaag ctcgggcgcc atcgtcatcg tcgctgacca tgccggcaaa aggatcatcg
     2521 tcaccgctgc cgccgatggt ggaactgctc ttatcggtct cacctttctt cggctgcatt
     2581 ttttgcttgt gttcttctcg catctgtttc agctgggcct gttgttccgg cgtgaggacc
     2641 ttgaacatct cctggtggga ctgttttctc agggccatct gcttttcacg cttctggtcc
     2701 tgattgagcg agctgtcatt gtggatggct ttcgcttgct ccatggcgtt ctggcgaatc
     2761 tgctggaact gctttttctg gtcatccgtc aggttcagct tctgggcgag ttcctgcatg
     2821 ttgtggcgtc gggcggcccg ccgcgcgcga ggtccgcgtc cgtgcggtcc ctgctgttgg
     2881 tcctgtgcgc caggctgtgc ctgctgatcg ctttgccctt tatcttggga aggctggctc
     2941 ggctgcgttt gcgcctgcac tcctgaaacc agcgcggcaa gcagcgcgaa tattgctaaa
     3001 tgaagacgaa gtgttctgga catgcgtttt ctccttgtca ccgccagaga acccaagtat
     3061 ggcgggaaag ttgtttttta gcgcctttcc aaggtaactt tcagcggagt tgcgggtttg
     3121 ttaccttggc gtattgacag ggggagacat gaaagcagcg attctcgcgt tatcgctcgg
     3181 cctgctggcc ggacgagtct gggcccagga acaccaccat gatgatgggc ctgcgggtga
     3241 attaaacgcc gcgacgcagg ccatggaaca ccatcatcat aatgggccgc acatgcacat
     3301 gagcaccctt cgaccagcgc agccgggcga ccagcaaaag gctgacgcca ttgttgaaca
     3361 gacgcgccaa gccatggaga aatatcgcga ttatcaggcg gcccttgccg atggtttcag
     3421 gatcttcctg cccaacgttc cccagaagat gtatcacttc accaattacg gaaacgcctt
     3481 taacgctgcc ttcaactttg atcccagcaa gcccacgtca ttgctttatg aaaaaatcgg
     3541 cgatggctac aagctgatag gggccatgtt caccgcgccg gtgggattca ccgaagacca
     3601 gctcaaccag cgggtccccc tcagcgtggc gcagtggcac cagcacgtga acatgtgcaa
     3661 ggcgccgcaa ggccgcggaa ttgagatgct gggcaagaac ccgcaattcg gcttgaatgg
     3721 atcgatctct acgcgcgaag aatgcgaagc tgccggtggg actttcatgc cgcacgtctt
     3781 cggctggatg gttcacctgt acccgtggga aaaaacttct gaccagatct ggtcagtgga
     3841 gcgccagctt caagacaagc cggccagcag cgaacatcag catcacgatc acggaatgat
     3901 ggcggcggag cagaaataga cgccgggaat agaagcccta gtcgaaggcg acctggatct
     3961 cttcgccgga gcggtctttt cttgccggat ggagcagcgc tgcgagcaag aacttcgagc
     4021 ctggctccat caggttcggc gacatgcggt attggtttgc gttaccggtg atccggactt
     4081 tggcgccaca gaattcggga aactcaaccg actcatttga tccacaacat acgtaaaggg
     4141 agagcaggtc gcagaactgc agaacgtcag taagctgttc gagttccgcg gcgctccgtt
     4201 tctgtttacg cgcgagttca gtctgccgat ccgactcgcg cgacgtgaat ccctccagtg
     4261 ccttgcgatc ctgcgcctga tcctgcgccg atttcaatcg atgctccgcc agtcgccaga
     4321 agtgccggct caccatgtaa ccgcctgcgg gcgaggtgga ttgcgcgatg tcaatggact
     4381 gggtccacgc cgctaggaat tcttgtaccg agcattgcag gaatgactgc ggatttttga
     4441 gctgcccggt gcggctgcgc atcaccacct gcgcatctgg cattccccag cccgcatcgt
     4501 ggagagcgat tgctcgtatc agttcagctt ccattttggg aacggcaggc gcattcaggc
     4561 gcgcggccat ttccccggcc agcgccgcat gcgaaggctg ggtcaccagc cagcagcttg
     4621 ggtattgctg tttttggatt ttttcaacga cgctccaggc aggctggaaa tcagaggaca
     4681 atgcctgcgc cgtgcgggat tcgagcggac gcaggatcat cggaagttcg gccgccgttt
     4741 tgcgatccgt ccact
//
LOCUS       DASQYP010000401         6352 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_100667, whole genome shotgun sequence.
ACCESSION   DASQYP010000401 DASQYP010000000
VERSION     DASQYP010000401.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 6352)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6352)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6352
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_100667"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2872)
                     /locus_tag="VE783_13005"
     CDS             complement(<1..2872)
                     /locus_tag="VE783_13005"
                     /inference="COORDINATES: protein motif:HMM:NF013069.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HYX54368.1"
                     /translation="MKSQGNSKRNIAQFFTQNRQIAWIILAATMAWGVFGYLNMPKRK
                     DPDIPVRIALAITPWPGISADKIEQLVTRKVEQAVTGNSKVDRVESTTQNNISVVTVR
                     LLDNIKNTQQEFQDIGQRLNQINDLPDGAGPITWISDFGDTAALMLTVASPTVPDLEI
                     DLRARGVQQAIQKLRGGDQQGRVSVLYCYPTSVSPAVIDRPFAILAKQAERDGIAQDF
                     RTLSQGSCSGIDFATSKSDDEIRAYGQQFIEKRLQEYDFHPDAWGPIIIHDPQSTRER
                     IAEFASNRYSYRQLDDYTDLIQRTLQRVPEVAKVQRVGVLPEEIYLEYSDSRLAALKL
                     QPTKIKDILNARNVTAPGGIVESQSRNVLIDATAEFKNPKEIGNVLVGSSPAGVPVYL
                     RDVVDISRGYQTPTRYLNYMTSRDPKGGWHRNRAITLAVQMRSGEQIGKFGEEVDKAL
                     QTVRPQLPPDLILARTSDQPKQVRELVSLLMGSLYEAIALVVIVALIGFWDWRAAMLM
                     AASIPLSLAMSFGVAHILNIDIQQVSIATLIISLGLIVDMPVVAGDAIKRELGTGLPR
                     EIASWFGPTKLAKAIVFATITNIVAYLPFLMLTGDTGFFLYSLPVVMTCTLVASLIVS
                     FTFVPLIAYYLIKPPKHIEPPISERRTHGFPGLYYRVGNFALRHRWGVFAGSLLMLVL
                     GGWFFSLLRPQFFPKDLSYLSYVDVWLPPDAPLGATDATTQRAEAVIRQEAERFGKEH
                     HRNNVLKSLTTFVGGGGPRFWFSVDPEQQQLNYAQILIEVADKHFTNELVGPLQTALS
                     REIPGARVDVRQLETGKPVGIPVSIRISGADINVLHRLSGELQAIFRSQPNATRVRDD
                     WGEPAMNVQLKVDPDRANLSGITNLDVALSSAAAVSGLPVSTYREVDKQIPIAVRLRM
                     EERARLSDVQNSYVYSLNSNQRVPLRQVSTVTTEMAVSKIKRR"
     gene            complement(2869..3993)
                     /locus_tag="VE783_13010"
     CDS             complement(2869..3993)
                     /locus_tag="VE783_13010"
                     /inference="COORDINATES: protein motif:HMM:TIGR01730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HYX54369.1"
                     /translation="MNVKTTATTLLLCLGMVACNSSKPLPQAPQAVQARQVDFQKGIG
                     ARGLRFSAVVMPDSQAQLAFRIPGYVVSLKQVRGQDGRMRDIAEGDRVTKGAVLAQMR
                     ATEYQDKVHQASSQVEAAEASAQKAKLDFDRASHLYQEASLTKPEFDAARAQYDSTQA
                     QLRAAQAQTAEANVSLHDTVLEAPFSGEVVKKTVEIGNYVGPGVPTLAIANTETVKIV
                     VGVPDTVVRSIRLGQAVEVEIDAFPGRTFHARISRVSSAADSTTRNFDVEVAIPNHDH
                     LLKVGMIGSLQLANDSSGNHPAVLVIPLSAIVQASDGKYGVFVISNSGTGDVARLRTV
                     EIGNSSGTDIAVLNGLASGEKIITSGANLLKDGQRVEVVQ"
     gene            complement(3990..5351)
                     /locus_tag="VE783_13015"
     CDS             complement(3990..5351)
                     /locus_tag="VE783_13015"
                     /inference="COORDINATES: protein motif:HMM:NF014385.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HYX54370.1"
                     /translation="MTAKKLLSLLLLICVGAGPASLAQQPASSPDDGAPLLRLDDALS
                     IAFENNRLVRNSSLEAQKFDFRVSTSRSRRLPQFQVDVLSGGLLQPFDFTIPAGSLGN
                     FATTGPIPAADAKITTHAQFTTFATGSIDQPLSQQFKIHYGIRVAELGREIALEQVRG
                     QRQKIAAQVRAAYYNLVSAQAAVQATREEVKTLEEAQRVTARYRLQEAVLRADVLDVD
                     ARLAKSRYQLSVTENGLSTEREHLNELLGRDLATPFRVEAMPEDDSSDLTLEAARHNA
                     AENRPEIREARLKETQAQYDRRIAKAEYIPDISLSVRYMGFNNFQVLPGNVATAGVYF
                     SWEPFDWGRRHNNVAEKSKTVEQARLGAKEAQAQVALEVGTKYRKWQESVLLLKAART
                     AHEAAAEQFRVTSNRYKEQATLVKDVLQAQARSAEAGSQYQQALSTYWSSLADLRRAM
                     GEE"
     gene            complement(5834..>6352)
                     /locus_tag="VE783_13020"
     CDS             complement(5834..>6352)
                     /locus_tag="VE783_13020"
                     /inference="COORDINATES: protein motif:HMM:NF024578.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PDZ domain-containing protein"
                     /protein_id="HYX54371.1"
                     /translation="PADIAGVKPGDIVLAVDGHPMLSLLGFTAALYQHSPEQNVKIDL
                     LRGTRKLSINLPPVVVNDGIDQLADIADPVKSHIGPLGVLALDLDTQTRSLVPGVRAG
                     GGVIVIAQARGFNSVNTGLRPGDVIHALNQTGIQSVEQLKSTLAQLKPGAPAVLQVER
                     RGQYQYLPFEME"
BASE COUNT         1272 a         1815 c         1871 g         1394 t
ORIGIN      
        1 tgcggcgctt gattttcgat actgccatct ctgtggttac agttgaaacc tgacgcaacg
       61 ggacgcgctg gttgctgttc agagagtaga cgtaggaatt ctggacgtca gagagtctgg
      121 cgcgctcctc catgcgcaga cgcacagcga ttgggatttg cttatccacc tctctgtagg
      181 tagagacggg cagtccgctc actgctgcgg cggatgaaag cgcgacatcc aggttcgtaa
      241 tcccggaaag attggcgcgg tccggatcaa ctttcagctg tacattcatg gctggctcgc
      301 cccagtcgtc ccggacacga gtggcgttgg gttgagatct gaaaatggcc tgcagctctc
      361 ctgagagccg gtgcagcacg ttaatatcag cgccggagat gcgaatggaa acaggtatgc
      421 cgaccggttt gccggtctca agctgtcgca cgtcgacccg ggcgccggga atttcccggc
      481 ttaaagcggt ttgcagtgga cctaccagtt cgttggtaaa gtgcttatcg gcaacctcaa
      541 tgagaatctg cgcgtagttg agctgttgct gctcaggatc cacagagaac cagaacctgg
      601 gaccgccacc gcccacgaaa gtggtgagcg atttgagaac gttgttccgg tgatgctctt
      661 ttccaaaccg ctccgcttcc tgccgaatta cggcttctgc ccgttgcgtc gtcgcatcgg
      721 tcgccccaag gggagcgtcc ggcggcagcc agacatcaac gtaagagaga taggaaaggt
      781 ccttggggaa gaactgcggg cggagcaggg aaaagaacca tccgccaagc acgagcatga
      841 gaagagagcc ggcaaatact ccccagcgat gccgcagagc aaagtttccc accctatagt
      901 agagcccggg gaagccatga gtacgacgtt cggagatcgg cggctcaata tgcttcggcg
      961 gcttaataag gtagtaggcg atcaggggga caaaggtgaa agacacaatc agcgatgcca
     1021 ccagagtgca ggtcatcaca accggcagac tgtaaaggaa gaagcccgta tcgccggtga
     1081 gcatcaggaa cgggagatac gcgacaatgt ttgtgatggt ggcgaacaca atcgccttgg
     1141 ccagcttggt cgggccgaac caggacgcaa tctctcgcgg caggccggtg cccagttcgc
     1201 gcttaattgc atcgccggca accacgggca tatcgacgat caggccgagc gatattatga
     1261 gcgtcgcaat agacacctgt tgaatgtcaa tattgagaat gtgggcgacg ccgaagctca
     1321 tcgccagcga aagtggaatg gaggcagcca tcagcatggc ggcgcgccag tcccagaaac
     1381 cgatgagcgc cacaatcacc accagcgcta tcgcttcata caagctgccc atcagcaggc
     1441 tcaccagctc tctcacttgc ttcggctggt ctgaggtgcg ggcaaggata aggtcaggag
     1501 gaagctgcgg ccgcacggtc tggagcgctt tatccacttc ttcgccgaat ttgccgatct
     1561 gctctccgga gcgcatctgt acggccagag tgattgcacg gttgcggtgc cagccccctt
     1621 tcgggtcgcg ggaagtcatg tagttcaaat agcgggttgg cgtctggtat ccgcgcgaga
     1681 tgtccaccac gtcgcgcagg taaaccggta cgcccgccgg tgaagaaccc accagcacgt
     1741 ttccgatttc tttgggattc ttgaactcgg ctgtggcatc aatcaagaca ttgcgtgact
     1801 gcgactccac aatgccgccc ggcgcggtta cgtttcgcgc attcagtatg tccttgatct
     1861 ttgtgggttg cagtttcagc gcggccagcc ggctgtctga gtactccaga taaatctctt
     1921 ccggcaaaac gcctacgcgt tgcaccttcg caacctctgg aacgcgctga agcgtgcgct
     1981 ggatcaggtc cgtatagtca tccagttggc ggtaggaata ccggttactg gcaaattccg
     2041 ctatgcgctc ccgcgtggac tgaggatcgt gaatgatgat cgggccccag gcatcgggat
     2101 ggaagtcata ttcctgcaat ctcttttcga taaactgctg gccataagca cggatctcgt
     2161 catccgattt tgaggtagca aaatcaattc cggagcaact cccctgggaa agcgttcgga
     2221 agtcttgtgc aatgccatcg cgctctgcct gctttgcaag aatggcaaac ggccggtcga
     2281 taactgccgg tgatacggac gtcgggtagc agtagagaac gctcacgcgc ccctgctggt
     2341 ctcctccgcg cagcttctgg atggcttgtt gcacgccgcg cgcccgcagg tcaatctcaa
     2401 ggtccggaac cgttggactg gccaccgtca gcatgagtgc tgctgtatcg ccgaagtcgc
     2461 tgatccatgt gatgggcccg gcaccatcgg gaagatcatt gatctgattc aggcgctgtc
     2521 cgatgtcctg gaattcctgc tgtgtgttct tgatattgtc cagcagcctg accgttacga
     2581 ctgagatgtt gttctgggta gtggattcca ctcgatccac cttgctgttt ccggtgacgg
     2641 cctgctccac cttgcgcgtg acgagctgtt cgatcttgtc cgctgaaatt cctggccatg
     2701 gagtaatcgc gagtgcaata cgcaccggga tatcggggtc cttgcgcttt ggcatattca
     2761 aatatccgaa cacgccccaa gccatggtcg cggccaggat aatccatgca atctggcggt
     2821 tctgggtgaa gaactgggcg atgttccgct tgctgtttcc ctgggatttc actggaccac
     2881 ctccacgcgc tgtccgtcct taagaaggtt ggcgccgctt gtaatgattt tttctccgct
     2941 cgccagcccg ttgagcaccg cgatatcagt tccgctggag tttccgattt cgactgtccg
     3001 cagccgggca acatccccgg ttccggagtt ggaaatcacg aacacaccgt atttgccatc
     3061 gctggcttgc acgatcgcgg acagcgggat taccaggacc gccggatggt ttccgctgct
     3121 gtcgttggcc agttgcagcg aaccaatcat tcccaccttg agcagatggt cgtggttggg
     3181 aatggcgacc tcaacatcga aattgcgcgt agtggaatcc gccgctgatg agacccggct
     3241 gattcgcgcg tgaaaggtac gccccggaaa tgcatcaatt tcgacctcga ccgcctggcc
     3301 aagccggatg gatcgcacca cggtgtcagg cacaccaacc acaatcttca ctgtctccgt
     3361 gttggcaatg gctagcgtgg gtacgccagg gccaacgtag ttgccgattt ccacggtctt
     3421 tttcacaact tcgccggaga acggcgcttc cagcaccgtg tcatgtaggg aaacgttcgc
     3481 ctccgcagtt tgtgcctgcg cggcccgcaa ctgcgcctgc gtggaatcgt actgcgcgcg
     3541 cgccgcgtcg aattcgggct tggtcaggct ggcctcctgg tacaagtggg aggcgcggtc
     3601 gaagtcgagt tttgcttttt gtgcagaggc ctcggccgct tccacctgcg agctcgcctg
     3661 gtgcactttg tcctgatact cggtggcgcg catctgcgcc agcaccgcgc ccttggtcac
     3721 gcgatcgcct tcagcgatgt cgcgcattct gccatcctgg ccgcgtacct gcttcagcga
     3781 gacaacatat cccggaattc tgaaggcgag ctgtgcctgg gaatcaggca taacaactgc
     3841 ggagaaccgc aatcctctcg cgccgatccc tttctggaaa tcgacctggc gcgcctgaac
     3901 tgcctgcggc gcctgtggca agggcttgct ggagttgcaa gcaaccatgc ccaggcaaag
     3961 taagagagtt gtggctgtag ttttcacgtt cattcttctc ccatggcacg gcgcaggtca
     4021 gcgagcgaac tccagtaagt ggagagggcc tgctggtact gtgaacctgc ttctgcgctg
     4081 cgagcctgag cctgcaacac atcctttacg agcgttgcct gctccttgta acggttgctg
     4141 gtgacgcgaa attgctccgc ggctgcttca tgtgccgtcc gtgcagcttt gagcagcagc
     4201 acagactcct gccatttgcg atatttggtt cccacttcca gcgccacctg ggcctgggcc
     4261 tcttttgctc ccagacgcgc ctgctccacg gtcttgctct tttccgctac gttgttgtgg
     4321 cgccgccccc agtcaaaagg ctcccaggaa aaatagacac ccgcggtggc cacgttcccg
     4381 ggcaggactt gaaagttgtt gaaacccata tagcgaaccg agaggcttat gtccggaatg
     4441 tattcggcct tggcgatgcg gcggtcatac tgcgcctgag tctccttcaa gcgcgcctcc
     4501 cggatttccg gccggttttc ggcagcgtta tgccgggctg cttcaagcgt gaggtcgctg
     4561 ctgtcatctt ccggcatggc ttccacgcga aatggcgtgg ccaggtcgcg gccaagaagt
     4621 tcgttcaaat gttcgcgctc agtggagagc ccgttctcag tcactgacag ttgataccgg
     4681 ctctttgcca accgcgcgtc cacgtcgagt acatccgccc gcagcaccgc ttcctgaagc
     4741 cgatatctcg ccgtgactcg ctgggcttct tccagcgttt tcacctcttc gcgcgttgct
     4801 tgaactgctg cctgcgctga gaccaggttg taataggccg ctctgacctg ggctgctatt
     4861 ttctggcgct gtccgcgaac ctgctccagc gcaatctcgc gacccagctc ggcgacgcgg
     4921 atgccgtaat ggatcttgaa ctgttgtgaa agcggctggt cgatgctgcc agtggcaaag
     4981 gttgtgaact gcgcgtgcgt cgtgatcttt gcatcggcgg cgggaatggg gccagtggtg
     5041 gcgaagttcc ctaatgagcc ggctgggatg gtgaagtcga agggctgcaa caggccaccg
     5101 gaaagaacat caacctgaaa ttgcggcagc cgccggcttc ggcttgtgct gacccggaaa
     5161 tcaaactttt gcgcctcaag cgacgagttt cttaccaggc ggttattctc aaacgcgata
     5221 ctcagcgcgt catccagcct gagcaggggg gctccgtcgt ccggagatga tgcgggctgc
     5281 tgcgccaggc ttgctgggcc agcacccacg catataagaa ggaggagtga taaaagcttt
     5341 tttgcggtca tctcggattc cttagcggag agcaagctca ccgttgtctc atgtgtcact
     5401 tgtgcaggtc gtgtaccaac cgtgggcagc gataagttgt tgaatatgcg actctcgagc
     5461 cacgccatgg ctgccgacga ctgccccaat gcgggcactg cccaaaggct gccgcatggg
     5521 cgagacgagt atgggcaggg ccgctgccga taattgggtc acaagctttc cgccgatgga
     5581 aggtgtgtag cagtgagtgt cgaagggtca caagccaaca caaacgcgga agcgatggct
     5641 gggagcttgc agagggcagt catgctcgaa ccagagaggg cactcgttca gagcattgca
     5701 ttcagcgaag ccggactgct ctggagcttc gaaaagcgct tgagctcgtc cggctggctt
     5761 tctcggctat ttcgtttagg tgggaagatc tattcagctc acagcggcac atggccagtg
     5821 gcaaaaatcg ttctcattcc atttcgaagg gaagatattg atattggcct cgacgctcga
     5881 cctgcaacac tgcgggagcg cctggtttaa gttgagccag cgtagatttc agctgctcca
     5941 cggattggat cccggtttga ttgagcgcgt ggatcacatc gccgggtcgc aggcctgtgt
     6001 tgactgaatt aaagccgcgc gcctgcgcaa tcacgatcac cccgccgcca gcacggacgc
     6061 caggtaccag agaacgcgtc tgtgtgtcga gatccagagc gaggacgccc agaggcccaa
     6121 tgtggctctt cactggatcg gcgatatccg cgagctgatc aatgccgtcg ttcaccacca
     6181 ctggagggag attgatggac agctttcgag tcccgcgcag caagtcaatt tttacgttct
     6241 gctcgggcga gtgctggtag agcgcagctg tgaacccaag caggctcagc atcggatggc
     6301 catccaccgc aagcacaatg tctcctggct tcacaccggc gatatcagcc gg
//
LOCUS       DASQYP010000402         3792 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_62055, whole genome shotgun sequence.
ACCESSION   DASQYP010000402 DASQYP010000000
VERSION     DASQYP010000402.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 3792)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3792)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3792
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_62055"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            113..457
                     /locus_tag="VE783_13025"
     CDS             113..457
                     /locus_tag="VE783_13025"
                     /inference="COORDINATES: protein motif:HMM:NF017897.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF962 domain-containing protein"
                     /protein_id="HYX54372.1"
                     /translation="MSEQEFRKYEDFFTFYLHEHSNPKNRLMHAAGTTLGLFTVIVPF
                     AIGHPWYALLWPVVAYGFAWTGHFLIEGNKPATFGHPFWSFISDFRMLGLMLTGRLEA
                     RMQKGKAVSAQR"
     gene            complement(530..1603)
                     /locus_tag="VE783_13030"
     CDS             complement(530..1603)
                     /locus_tag="VE783_13030"
                     /inference="COORDINATES: protein motif:HMM:NF027967.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fibronectin type III domain-containing protein"
                     /protein_id="HYX54373.1"
                     /translation="MKKYLATLIVGVAFAAWGMAQNGPVQITQPPKVENVTSNSAIIA
                     WSTNVNSSTLVRYGTNQGSLSQTAEMPWGGLTHRVTLKNLQPGTTYYYQAESGKGQGT
                     GTKADAPVATFQTSGGPVASNSMPASPAAPPPAAAAPAPAAPAAQAAPAAGTATLQAG
                     PVTEKIEDTSAMVWALPTTPQALTIKYGTSQSALNQTAQAASEGGTEVGNEVRLTGLQ
                     PSTVYYYQVADASGRVLDGGSFQTLQANFRATKQPWITRGPEIEYITSNKAVIAWSSS
                     VPTGGSVLYGTSPSAMTQTASASPSGDTNRATLTNLQPNTTYYFMVRSGQSTQNGGQS
                     FPAKFMTTAPGQTVVHNKQNKAE"
     gene            1806..>3792
                     /locus_tag="VE783_13035"
     CDS             1806..>3792
                     /locus_tag="VE783_13035"
                     /inference="COORDINATES: protein motif:HMM:NF014598.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0009267 - cellular response to starvation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbon starvation CstA family protein"
                     /protein_id="HYX54374.1"
                     /translation="MKTGKILLWLGVAVLGTLAFATIALKRGEPISAMWLIAAAACSY
                     ALGYRFYSKFLAAKVLTLDAKRATPAERLDNGRDFMPTNKWVVFGHHFAAIAGPGPLV
                     GPVLAAQFGYLPGTLWILVGAVFGGCVQDFVILLFSVRRDGKSLGQMAREEIGKTAGT
                     VAFIAVLSILVILLAVVALIIVNALKDSPWGVFTIGMTIPIALLMGWYLRHLRPGRVL
                     EASALGFVCVLLAIFGGQWVSHSHALAGFFTLSATTLAVLIIVYGFAASALPVWLLLA
                     PRDYLSTFVKLGTVAILAIGIVVVRPTLQMPALTRFIDGSGPVFAGNLFPFAFITIAC
                     GAISGFHSLISSGTTPKLIARETQTRMVGYGAMIAESLVGVMAMIAACTLQPGAYFAV
                     NSGAGMVGGTPASAVATISNWGFPVTADQMTTLAAAVGEKTLFFRTGGAPAFALGMAK
                     IFSDSLGGTAVMALWYHFAIMFEALFILTVLDAGTRVARFMLQDALGHVWPAMGKTSW
                     YPSILTTSALVVGAWAWFLWQGIRDPLGGINSLWPLFGICNQLLATVALCVATTILVK
                     MGRARYMWTTLLPLVWLIAVTFSASLAKIFSPNPLIGLLAHARKMASGPATADLARRT
                     FNDQLDAAVCGLLMILVSVIVVESAAVWVSVISGRRRA"
BASE COUNT          631 a         1068 c         1225 g          868 t
ORIGIN      
        1 atcgccttcc gccgccggaa agtagctaca tagtagaatc ctgcgcgtga gctacgcgcc
       61 gccgcccggc ccgcatcgaa ataatttctg tttgcatcag ggagaaccgc gaatgtctga
      121 gcaggaattt cggaagtacg aggatttttt cacgttttac ctgcacgaac acagcaatcc
      181 gaagaaccgg ctgatgcacg ctgcgggaac cacgctggga ctgtttaccg tgatcgttcc
      241 gttcgcgatt ggccatccat ggtatgcgct gttgtggccg gtcgtggcgt atggtttcgc
      301 gtggacgggc cacttcctca tcgaaggtaa caagccggcc accttcggcc atccgttctg
      361 gtctttcatc agcgacttcc gcatgcttgg cctgatgctt acgggaaggc tggaagcgag
      421 aatgcaaaag ggaaaagcag tttcagcaca gcgctgagaa ttcccaataa tccagtgaaa
      481 agaaaaggcc gctcgcagcg agcggcccaa tagtttcttc ggccggaaat cactccgcct
      541 tgttctgttt gttgtgcacc accgtctggc ccggcgccgt ggtcataaac tttgccggga
      601 agctctgtcc gccattctgc gtgctctggc cggagcgcac catgaagtag taggtggtgt
      661 tgggctgcag gttggtaagc gttgcacggt tggtgtcgcc actgggtgaa gccgaggcgg
      721 tctgcgtcat tgcggacggg ctggtgccat acagtacgct tccgcctgtg ggaacactgg
      781 acgaccaggc aatcaccgcc ttgttgctgg tgatgtactc gatctccggg ccgcgggtaa
      841 tccagggctg cttggtagcg cggaaatttg cctgcagcgt ctggaacgat ccaccgtcaa
      901 gcacgcgtcc gctggcatcg gccacctgat agtagtaaac agtgctcggc tgcagaccgg
      961 tgaggcgcac ctcgttgccc acttcggttc cgccttcgct ggcggcctgg gccgtctggt
     1021 tgagcgcgct ctggctggtg ccgtatttga tcgtgagcgc ctgcggcgtg gtgggcagtg
     1081 cccaaaccat ggccgaggta tcttcaatct tctccgtgac tggtcccgcc tgaagcgtgg
     1141 cagttcctgc cgcgggcgcc gcttgagcgg caggagccgc gggcgctgga gctgctgcgg
     1201 ctggcggagg agcggcaggc gaagccggca tgctgttcga cgctactggt ccgccggacg
     1261 tctggaaagt ggcaaccgga gcgtcggctt tcgttcctgt gccctgtccc ttgccggact
     1321 cagcctgata gtaataagtg gttccaggct gcagattttt gagcgtaacc cgatgcgtca
     1381 atccgcccca gggcatttcc gccgtctggc tgagagagcc ctgattggtg ccgtagcgca
     1441 ccagcgtgct ggaattcacg ttggttgacc aggcgataat cgcgctgtta ctggttacgt
     1501 tttcaacttt gggtggctgc gtgatctgca caggaccgtt ctgggccata ccccacgcgg
     1561 cgaacgccac ccccacgatc agcgttgcca gatacttctt catcgcacat acctccatat
     1621 tggttccgtt caagaatgca gacggtggcg gctttccggc ttagatgttt gttgctgccc
     1681 agaggtgggt agctgttgca ccgcgccggt attgcttatc tggtaaacac tgatttgcgc
     1741 attgagtcgc ggttgggcag aatagctcgg cgaaaaatca tctgcgaaca gtggtggagc
     1801 tctgaatgaa gacaggcaag atcctgctct ggcttggcgt ggcagtcttg ggcacgctgg
     1861 cgtttgcgac cattgctctg aagcgcggcg agccgatcag cgccatgtgg ctcattgccg
     1921 cagccgcctg cagctatgcg ctgggctacc ggttttacag caagtttctg gcggcgaagg
     1981 tgctcacgct cgacgccaaa cgcgccactc ccgcggagcg gttggacaat ggccgcgact
     2041 tcatgccgac aaataagtgg gtggtattcg ggcaccattt tgctgccatc gcaggaccgg
     2101 gaccgctggt ggggccggtg ctcgctgcgc aatttggcta tctgccaggc acgctctgga
     2161 tcctggtcgg cgcggtgttc ggcggctgcg tgcaggattt tgtgatcctg ctgttctcgg
     2221 tacggcgcga cggcaagtca ctcggccaga tggcacgaga agagatcgga aagaccgccg
     2281 ggacggtggc gttcatcgca gtgctgagca ttctggtgat cctgctggcc gtggtcgcgc
     2341 tgatcattgt gaatgcgctc aaagatagtc cctggggagt cttcacgatc ggaatgacta
     2401 tccctattgc gctgctgatg ggctggtacc tgcggcacct gcgtccggga cgcgtgctgg
     2461 aggcttcagc gcttgggttc gtctgcgtgc tgttggcgat cttcggcggc cagtgggtct
     2521 cgcattcgca cgcgctggcc ggctttttca ctctgagcgc gaccacgctg gcggtgctga
     2581 tcatcgttta tggattcgcc gcttcggcgc taccggtgtg gttgctgctt gcgccgcgtg
     2641 attacctgag cacctttgtg aagctgggca cggtggctat ccttgcaatc ggcattgttg
     2701 tggtgcggcc gaccttgcag atgccggcgc tcacgcgctt tattgacggc agcgggccgg
     2761 tctttgccgg caatctgttt ccttttgcgt tcatcaccat tgcctgcgga gccatcagcg
     2821 gatttcattc cctgatctcg agcggcacca cgcccaagct gatcgcccgc gagacgcaga
     2881 cccgcatggt cggctacggc gcaatgattg ccgaatcgct ggtgggcgtg atggcaatga
     2941 tcgccgcttg cactctccag ccgggagcgt acttcgcggt gaacagtgga gcaggcatgg
     3001 tgggcggcac gccggcgagc gcggtagcga cgatttccaa ttggggattt cccgtcaccg
     3061 cggatcagat gaccacgctg gcggcggcgg tcggagagaa gacgctgttc ttccgcaccg
     3121 gcggggcgcc agctttcgcg ctgggcatgg caaagatttt ctctgacagc ctgggcggca
     3181 cggccgttat ggccctctgg tatcacttcg ccatcatgtt tgaggctctc tttatcctta
     3241 cggttctcga tgccggtacg cgggtagcgc gttttatgct ccaggacgcg ctcgggcacg
     3301 tgtggcccgc catgggaaaa accagctggt atccgagcat tcttaccacc agtgcgttgg
     3361 tcgtaggcgc gtgggcgtgg tttctgtggc agggaattcg cgatccgctg ggcggaatca
     3421 actcgctgtg gccgctgttc ggcatttgca atcagcttct ggcgactgtg gccttgtgcg
     3481 tggccaccac gattctggtg aagatgggcc gggcgcgcta catgtggacc acgctcttgc
     3541 cgctggtgtg gctcatcgcg gtaacgttct ccgcttcgct ggcaaagata ttcagtccta
     3601 atccgttaat cggattgctg gcgcacgcgc gcaaaatggc gtcgggcccg gcaacggcgg
     3661 acctggcgcg caggactttc aatgatcaac tcgatgccgc agtctgcggg ctgctgatga
     3721 ttctggtcag cgtgattgtg gtggagtctg cggcggtgtg ggtcagcgtg atttcgggac
     3781 ggagaagagc gg
//
LOCUS       DASQYP010000403         9697 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_62262, whole genome shotgun sequence.
ACCESSION   DASQYP010000403 DASQYP010000000
VERSION     DASQYP010000403.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 9697)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9697)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9697
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_62262"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2327
                     /locus_tag="VE783_13040"
     CDS             <1..2327
                     /locus_tag="VE783_13040"
                     /inference="COORDINATES: protein motif:HMM:NF036531.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004866 - endopeptidase inhibitor activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="alpha-2-macroglobulin family protein"
                     /protein_id="HYX54375.1"
                     /translation="SLGVVDEAIYSVHPDSVQDISGFFYGRVENRVQMQSSLSFYFTG
                     EAGTKPMILAFDGKKREPRLAQLKPSKPLIQPKVRKVFPDTALWLADVRTDQNGRGQA
                     DVTFPDSLTTWRATARGATLDTKVGSATNKVIVRKNFMVRLAVPRFFRQGDDVTVSTI
                     VHNYLTDSKNAQVSLEAKGLDLQEHGPQQVTVASKADQRTDWHAHAQSVREATLLAKG
                     LTNEESDALELTLPVIPFGVKLSDSKSGAVTGDTGQEQVTVNLPGDPVTAAPSLSVSV
                     SPSVAGSIFGALDYLTSYPYGCTEQTMSGFLPDVVVARAMKDLGLESTINTVELNKKI
                     KAGLERLYDFQHDDGGWGWWKEDTSMVFMTAYVVSGLAQARDAGYDVDNDRLKKAESW
                     LKAQVEQHAQMRPDLRAYVLYALALDKNADGILNDGYAGRKEMTSQGLSMLGLALHRA
                     GDARAAEIADMVEKQATADESEAHWTSDYDPLMEFYIDDSAEATAFAVRLLSQVKPAS
                     PVLPKAAFWLVNHRDGGYYWLSTKQTAMAVYGLLEYVKISHEFDANFTATVYVNDNPV
                     LTRRFTRADAMKGELPRVLVPAEQLRSGANTVRIQKSGTGRLYWSVRGEYYSTEKKYF
                     QQNKLSLSIARDYYRLAPQRDGEKIVYVLQPLSGEVHSGDVIAVRLTVTGSEWRYLLV
                     EDPIPAGAELIQRDDLYELKQRTDWWGWWYTRREFHDDHAAFFQTYFKDHKDYVYLLK
                     IVNPGKFRISPASVQPMYQPSVISTTDAAYMEVK"
     gene            2327..3130
                     /locus_tag="VE783_13045"
     CDS             2327..3130
                     /locus_tag="VE783_13045"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX54376.1"
                     /translation="MKPLRQSFALVLRTPRLWLVQVAGNVAILLLYAGWLRLAEAHWW
                     ELVLNLLVPLMIFAGAVVLHGGTLNFYCDAQSDPAALITPAFRNALRHLVAIVIWIVV
                     FFILWDQLNWLDNYSYKITGFLRSSLPAWLRKHTAEEGLNDSFGYLIAVLRWVVLPGL
                     LLPMALLTAELGLSGLKRFREWGRMLRSVSYWVVLALAAIIGVVLTDVLMEWKPRQET
                     ATLFQEEVSVVIRMIVAYGLALFSWLWVCSMLGRLRPAGEPAAEPAQNS"
     gene            complement(3068..4786)
                     /locus_tag="VE783_13050"
     CDS             complement(3068..4786)
                     /locus_tag="VE783_13050"
                     /inference="COORDINATES: protein motif:HMM:TIGR02669.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SpoIID/LytB domain-containing protein"
                     /protein_id="HYX54377.1"
                     /translation="MMRRAAALTLLQLTVLTSAYAQSTISIRLYSQHAERRLTITGQT
                     GDFRWRTCAKCAPNSAARLSVELAGNKLQLQSGPAVDRVFVEGAYRINPEQGLKAALT
                     APLELTPAEGTILVLASVPLEDYVAAALEGEAAILKQPEALKAMAVAIRSYAIHFRGR
                     HRSEGFDLCDSTHCQALNFTGTTAAVRDAVQATRGEMLWYGAEPAATYFHQSCGGQTA
                     AGTEAWPDLNAPYLKSHSDPFCVRATPMVWRAEFSRSQIQDAVQQQGLKAPSNWSRLD
                     ITQRTASGRALRLTFTGGDSQAEISASSLRFALGRTYGWNRIRSDLYEIENSGQQIVF
                     RGRGAGHGVGLCQSGAEQMAAEGKSYREILAFYYPGTMLGRSARLNWQERHGARIHLL
                     TTEPEQDASLLPRAESLLQSLESDLGWKLDFVPQIRVFPTLDAYRNATGQPGWIAAYT
                     RGPSISLQPVSVLRGKSALDSTLRHEFLHLLIESRARPETPLWLREGLTLFLAEPDRA
                     HQPVQMTVQQMEAGLQKPADRESLERCYAAARTRVAQLVTDNGRSTVLGWLSGGLPGG
                     TQPTQH"
     gene            complement(4786..5646)
                     /locus_tag="VE783_13055"
     CDS             complement(4786..5646)
                     /locus_tag="VE783_13055"
                     /inference="COORDINATES: protein motif:HMM:NF013100.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008658 - penicillin binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding transpeptidase
                     domain-containing protein"
                     /protein_id="HYX54378.1"
                     /translation="MEAQLQRALALGMKGKPGSAAVMDVRSGRLLASWELKVSAQRLV
                     APGSTLKPFFLQELLRLHRISPEQRLICRRPLFIAGRRMDCSHSPEVADLNSSDAIAY
                     SCNSYFASVATRLTAQEVADLYHRLGVTSFTGLASSEVHGRVSLAQTPAQQQLQALGE
                     WGVLITPLELLSAYRKLAAQRLEAPSAADPVFLGLEHSVQYGMAHSAASMSITAAGKT
                     GTAAGPTTAQTHGLFLGYAPAERPQIVLMVYLEQGRGSDAAAIAGPIFAAYAEAAPAA
                     GGRPGRGAAK"
     gene            6006..7019
                     /locus_tag="VE783_13060"
     CDS             6006..7019
                     /locus_tag="VE783_13060"
                     /inference="COORDINATES: protein motif:HMM:NF014605.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PhoH family protein"
                     /protein_id="HYX54379.1"
                     /translation="MKKSIEIVPNLQKLFGTRDENLLIMEGGLNVAIDLKSDSVQIEG
                     AARDVARAEQIFTDFDALSRSGVEFAPSDLNSMLRVVSEDPSTTLRGLAEAGRQRQFG
                     KRQVQPKSINQRRYLDAIERSDMVFGIGPAGTGKTYLAVAMAVSALNNKKVNRIILAR
                     PAVEAGERLGFLPGTLQEKVDPYLRPLYDALYDLMDQEKVDRFLEKNVIEIAPIAFMR
                     GRTLNDSFIILDEAQNTTSEQMKMFVTRLGFNSKAVITGDITQIDLPNKRSGLVEAAE
                     VLKHVEGVSFNYFTEEDVVRHHLVQRIIRAYDERQRSQQMALEMPRQVGEAQEPQEPP
                     LQQ"
     gene            7077..7538
                     /gene="ybeY"
                     /locus_tag="VE783_13065"
     CDS             7077..7538
                     /gene="ybeY"
                     /locus_tag="VE783_13065"
                     /inference="COORDINATES: protein motif:HMM:TIGR00043.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004540 - RNA nuclease activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0042254 - ribosome biogenesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="rRNA maturation RNase YbeY"
                     /protein_id="HYX54380.1"
                     /translation="MIIFETTVEEVSEPALARFAAQAKKLCRLQGEVSVLVASSRRLQ
                     ALNRQFRRKNKATDVLSFPRENGGDIAISADIARANAARLGHSALSEFKILVLHGMLH
                     LARYDHERDDGEMRRKESRLRKELKLPDSLIERTHAKKSRAKSGTKRRGGQ"
     gene            7535..8812
                     /locus_tag="VE783_13070"
     CDS             7535..8812
                     /locus_tag="VE783_13070"
                     /inference="COORDINATES: protein motif:HMM:NF013741.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hemolysin family protein"
                     /protein_id="HYX54381.1"
                     /translation="MIAAISIYVAILGLCALLTLVSYIEQLYTESGKFLAREFQENVD
                     AFENLIEPRLGMISSRAALSIALLEQFCTATITLLIGYLIFAEQRWTVPEIIQAAVGI
                     ILVIIICNRLLPYVLFTRTRGVWLVRYVRLIKFLIYLMLPISVVLGFGLSVASLSKPH
                     EPEEPEHPSEAVDALIEAGQEEGILEESDRQLIQSVVEFGDKTVREVMTPRPDIFAVS
                     AETTIAEFTEMLREKPHSRVPIYLSNIDNIQGMVLAHDLIQIDDAEASTTMVRKLMRP
                     VLFVPETKKTSQLLREMQRENIHMAIAIDEYGSVAGIVTMEDLVEEIVGEIRDEHEEE
                     TDVIKESEGAYVMKGNVDVGRLEDLFETHLDTHEAATIGGLVSAIVGRIPQPGEVIEE
                     YGLKFEVLESTDRKVEKLRVCRSKPEERAEQAI"
     gene            9306..>9697
                     /gene="tnpA"
                     /locus_tag="VE783_13075"
     CDS             9306..>9697
                     /gene="tnpA"
                     /locus_tag="VE783_13075"
                     /inference="COORDINATES: protein motif:HMM:NF033573.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS200/IS605 family transposase"
                     /protein_id="HYX54382.1"
                     /translation="MPHTYSQNYLHVVFSTKERRKLITREMQPKLWAYLAGIARNHDF
                     LVLANGGMEDHVHLLIQLPPVLALAKAVSTLKSNSSRWMSEHGSWFAWQEGYGAFSVS
                     ASKLGTVESYIANQERHHRRITYEDEFLG"
BASE COUNT         2070 a         2674 c         3087 g         1866 t
ORIGIN      
        1 tcagcctggg cgtggtggat gaggcgatct attcggtgca tccggacagc gttcaggata
       61 tctcgggctt tttctatggc cgggtggaga accgggtgca gatgcagtcg tccctgagct
      121 tctacttcac gggagaggcc ggcactaagc ccatgatcct ggcgtttgac ggcaagaaaa
      181 gagaaccaag gctggcgcaa ctgaaaccct ctaagccgct cattcagcca aaggtccgca
      241 aagttttccc ggataccgcg ctttggctgg cggatgtacg caccgaccag aatggccgcg
      301 gacaggcgga cgtcaccttc ccagattcac tcacgacctg gcgcgcgact gcccgcggcg
      361 caacgctgga caccaaagtt ggttcagcca ccaacaaagt catcgtgcgc aagaacttta
      421 tggtgcggct ggcggttccg cggttcttcc ggcagggtga cgatgtgacg gtttcgacga
      481 tcgtccacaa ttacctgaca gatagcaaga acgcgcaggt ctctctcgag gcaaagggcc
      541 tggatctgca ggagcatggt ccacagcagg tgacggtggc cagcaaggcc gaccagcgca
      601 ctgactggca tgcacatgcg cagagcgtgc gtgaagccac attgctggcc aaagggctta
      661 ccaacgagga atccgacgcg ctggagttga ccctgccggt gattccgttt ggcgtgaaac
      721 tttccgacag caaatctggt gcggtcaccg gcgatacagg tcaggagcag gtgacggtga
      781 atttgccggg cgatccggtg acagcggcgc ccagcttgag cgtgagcgtc agcccgtcag
      841 tggcgggcag catctttggc gcgctcgact acctcacctc ctacccctat ggctgcactg
      901 aacaaacaat gtcgggcttt ttgcccgatg ttgtagtggc gagggcgatg aaagaccttg
      961 ggctcgaaag cacaatcaac acagttgagc tgaacaagaa gatcaaggca ggactggaaa
     1021 ggctctatga cttccagcat gacgatggcg gctggggatg gtggaaggaa gacaccagca
     1081 tggtcttcat gactgcctac gtggtgagcg gcctggcgca ggcccgcgac gcaggctatg
     1141 acgtggataa tgaccgcctc aagaaggctg aatcctggtt gaaagcgcaa gtggagcaac
     1201 acgcgcagat gcgtccggac ctgcgcgcat acgtgcttta tgcgctggcg ttggacaaga
     1261 acgccgacgg aatactgaac gacggctacg ccggacgcaa ggagatgacg agccagggac
     1321 tctcgatgct cggactggcg ctacaccgcg cgggcgatgc aagggccgcg gagatcgccg
     1381 acatggtgga aaagcaagcc acggcagatg agagcgaggc acactggaca tcagactacg
     1441 acccgctgat ggagttctac attgacgact ccgccgaagc tacggccttc gccgtgcgcc
     1501 tgctgagcca ggtgaagccc gccagcccgg tgctgccgaa ggcggcgttc tggctggtga
     1561 accatcgcga tggcggctac tactggctga gcacgaagca aacggccatg gcggtgtacg
     1621 gcctgctcga gtatgtgaag atcagccatg agttcgacgc caacttcacc gcgacggttt
     1681 atgtgaatga caatccggtg cttacgcggc ggtttacgcg cgccgacgcc atgaaaggcg
     1741 agctgccgcg tgtgctggtc ccggccgagc agctgcgcag cggcgcgaac accgtccgca
     1801 ttcagaaatc aggcaccgga aggctttact ggtcggtgcg cggcgagtac tacagcacgg
     1861 aaaagaaata tttccagcag aacaagctgt cgctcagcat cgcgcgagat tattaccggc
     1921 tggcgccgca gcgcgatggc gagaagattg tctatgtcct gcagccgctc agcggagagg
     1981 tacattcggg agatgtgatc gccgtgcggc tgaccgtgac cgggagcgaa tggcgctacc
     2041 tgctggtgga agatccgatt ccggcgggag cggaactcat tcagcgcgat gatctttacg
     2101 agctgaagca gcggacagac tggtggggct ggtggtacac gcgacgcgag ttccacgacg
     2161 accatgcggc ctttttccaa acgtacttca aagaccacaa agattacgtt tatctgctga
     2221 aaattgtgaa cccgggcaag ttccgcatca gtccggcgtc ggtgcagccg atgtaccaac
     2281 cttcagtgat ttcaacgacc gatgctgcgt acatggaggt gaagtaatga agccgctgcg
     2341 gcagtcattc gctctggtgc tgcgcactcc ccggctgtgg ctggttcagg tggccgggaa
     2401 cgtggccatt ctgctcctct atgccggctg gcttcggctg gcagaagcgc attggtggga
     2461 gctggtgctg aatctcctgg tcccgctcat gatcttcgcc ggcgcggtgg tgctgcatgg
     2521 cggaacgctg aacttttatt gcgacgcgca aagcgaccca gccgcactga tcacgccggc
     2581 cttcaggaat gcgctgcggc atttggtcgc gatcgtaatc tggatcgtgg ttttcttcat
     2641 tctgtgggac cagttgaact ggctggataa ttatagctac aagatcacag gatttctgcg
     2701 atcttcattg ccggcctggt tgcgaaagca caccgccgag gaaggattaa acgattcttt
     2761 tggttacctg atcgccgtgc tgcgctgggt agttcttccc ggcttactgc ttcccatggc
     2821 gctgctcacg gctgaattgg gcttgagcgg cttgaaacgt tttcgcgaat ggggcaggat
     2881 gctgcggagc gtgagctact gggtggtgct tgcgcttgct gcaattattg gcgtggtgct
     2941 tacagacgtt ttgatggagt ggaaaccccg gcaggagacg gcaactcttt ttcaggaaga
     3001 agtcagcgta gtcattcgga tgatcgtggc ttatgggctg gcgttgtttt cctggctatg
     3061 ggtctgttca atgctgggta ggctgcgtcc cgccggggag cccgccgctg agccagccca
     3121 gaacagttga tcggccgttg tcggtgacga gttgtgcgac gcgagtgcgc gcggccgcgt
     3181 agcaacgctc cagggattcg cggtcggcag gtttttgtag cccggcttcc atctgttgca
     3241 ccgtcatctg gaccggctgg tgagcacggt caggctcggc caggaacaag gtcaatcctt
     3301 cacgcaacca tagcggcgtt tccgggcgag cgcgggattc aatcagcagg tgcaggaact
     3361 catgcctcag cgtggaatcg agcgcagatt tgcctctcag cactgagact ggctgaaggc
     3421 taatggacgg gccgcgcgtg tatgccgcaa tccagccggg ctgtcccgtg gcgttgcgat
     3481 aggcatcaag cgtggggaag accctgattt ggggaacgaa atccagcttc cagcctagat
     3541 cggactcgag cgattgtaga agactttcag cgcggggaag cagtgaggcg tcctgctcgg
     3601 gttctgtggt gagcaggtgg atacgggcgc catgcctctc ctgccaattc agccgggctg
     3661 aacggccaag cattgtgccg ggatagtaga aggccaggat ctcgcggtag ctcttgcctt
     3721 ctgctgccat ctgttccgcg ccagactggc agagccccac tccgtgaccg gcgccgcggc
     3781 cgcgaaaaac gatttgctgg ccggagtttt cgatctcata gagatcgctg cggatccggt
     3841 tccaaccata ggtgcggcca agtgcgaacc ggagtgaaga cgctgaaatt tctgcctggc
     3901 tgtcacctcc ggtaaaggtg agccggaggg cacgaccgct ggcggtgcgc tgagtgatgt
     3961 cgagccgcga ccagtttgag ggtgctttga ggccctgctg ctggacggcg tcctgtatct
     4021 ggcttcggga aaattcggcc cgccacacca ttggggtggc acgcacgcaa aaggggtcgg
     4081 agtggctttt caggtaggga gcgttgagat cgggccaggc ttcggtgccc gcggcggtct
     4141 gtcccccgca gctctggtga aagtatgtgg ccgcaggttc ggcgccgtac cagagcatct
     4201 cgccgcgcgt ggcctgtact gcgtcgcgca cggccgcggt tgttccggtg aaattcaggg
     4261 cctggcaatg cgtactgtca cacaggtcga agccctcact gcggtggcgt ccgcgaaaat
     4321 ggatggcgta ggaacggatg gccactgcca tcgccttgag agcttccggc tgtttgagaa
     4381 tggcggcctc accttccaaa gctgctgcca cataatcttc caaaggaact gaggcaagaa
     4441 ccaggatggt gccttcagcg ggcgtgagtt cgagtggcgc agtaagcgcg gcttttaggc
     4501 cctgctctgg attgatgcgg tacgcgccct cgacaaacac tctgtccact gcgggaccac
     4561 tctgaagctg gagtttgttg cccgcgagct caacagagag ccgggcggcg gagttgggcg
     4621 cgcattttgc gcaggtgcgc cagcggaagt cgccggtttg gccagtgatt gtgaggcgac
     4681 gctcggcatg ctggctatag agtcggatgg aaatggtgct ttgggcgtag gcggacgtca
     4741 gaacggtcag ctgaagtagt gtgagtgcgg cggcccgacg catcatcact ttgctgctcc
     4801 tcttcccggt cttccccctg ccgcaggggc ggcttctgca taagccgcga agatggggcc
     4861 tgctatggct gcggcatctg atccgcggcc ctgctcaagg tagaccatca gcacaatctg
     4921 cggtcgttca gccggcgcat agccgagaaa aagcccatgg gtctgggcgg tggtgggccc
     4981 agcggcggtt ccggtttttc ctgcggcggt gatgctcatg ctggcggcag agtgagccat
     5041 tccgtattgc acggaatgtt ccaaacccag gaagacggga tcggcggcag agggggcttc
     5101 caatcgttga gcggcgagct tgcggtaggc agagagcagc tcaagcggag tgataagaac
     5161 gccccattcg cccagagcct gcaactgctg ctgggccggt gtctgggcca gggaaacacg
     5221 accgtgtacc tccgaggacg cgaggcctgt aaaagaggta actcccagcc gatgataaag
     5281 gtccgcaact tcctgggcgg tgaggcgggt agcgacgctg gcaaaataag agttgcagga
     5341 gtaggcgatc gcgtcagacg aattgaggtc ggcgacttca ggggaatggg agcaatccat
     5401 gcgacggccg gcgatgaaaa gagggcggcg gcagatgagc cgctgctccg gagaaatccg
     5461 gtgcaggcgg agaagttcct ggaggaaaaa aggctttaag gtggaaccgg gtgctaccaa
     5521 tcgctgcgcg gagactttca gctcccagga cgcgagtagc ctgcccgagc ggacgtccat
     5581 cacggcggcg gagccgggtt tgcccttcat ccccagggcc agggcgcgct ggagctgggc
     5641 ctccaaggcg gggggcggcg aaggatcctg agcgggcgag cccaaggtga gtgaaagaaa
     5701 taaaagaaga taaaggatgc gcaatgaggg aatcttaacg cagaatatgc ggtgattggc
     5761 tgcgagtccc ccacggggga gcaaacgaaa gaaccgcacc cgcagctctc tccggtgcat
     5821 ctaaaaattg agagtgttaa atgttgcaga aacggttgac gccgccctcc agcagcgcta
     5881 ctctcacccc gatggtatct gctcggagac cggcagctct gcaaatccct tccgcaactc
     5941 ctggtccggc aatttcgccc aactccgcgc caatccaacg gctcctaaca acggctaaag
     6001 gttgaatgaa gaaaagtatt gagatcgttc ccaatctgca aaagctcttc ggcacgcgtg
     6061 acgaaaacct gctcatcatg gaaggcggcc tgaacgtcgc cattgacctg aagtctgact
     6121 ccgtgcagat tgaaggcgcg gcgcgggacg tggcacgcgc cgagcagatc ttcaccgact
     6181 tcgacgcgct cagccgctcc ggcgtggaat ttgcgcccag cgacctgaac tccatgctgc
     6241 gcgtggtgtc ggaggacccc tcgacgacgt tgcgcgggct cgccgaagcc ggccgccagc
     6301 ggcagttcgg caagcgccag gtccagccaa aatcaatcaa ccagcggcgt tatctcgacg
     6361 caatcgaacg cagcgacatg gttttcggaa ttgggccagc cggcaccggc aagacttatc
     6421 ttgccgtggc catggccgtt tccgcgctga acaacaagaa ggtgaaccgc attattctag
     6481 cgcggccggc ggtggaagcc ggcgagcggc tcggcttcct gccgggcacg ctgcaggaaa
     6541 aggtggatcc ctatctccgc ccactctatg acgcgcttta tgacctcatg gaccaggaga
     6601 aggtggatcg ctttctggag aagaacgtca tagagatcgc gcccatcgcg ttcatgcgcg
     6661 gacgcacgct caatgactcc ttcatcatcc tggacgaagc ccagaacacg acgtccgagc
     6721 agatgaagat gttcgtcacg cggcttggct tcaactccaa ggccgtgatc accggcgaca
     6781 tcacccagat tgacctaccg aataagagga gtgggctggt ggaagcggcg gaagtgctca
     6841 agcacgtgga aggcgtaagc ttcaattact tcactgaaga ggacgtggtg cggcaccacc
     6901 tggtgcagcg gatcatccgc gcctatgacg agcggcagcg cagccagcag atggcgcttg
     6961 agatgccgcg ccaggtcggc gaagcacagg agccgcagga accgcctctg caacagtaga
     7021 aatagtagaa tcgtagcggg agggcggctt ggccctcccg tttcgtttta acggacgtga
     7081 tcatctttga aactacggtt gaggaagtga gcgagccggc gctggcccgc tttgccgcac
     7141 aggcaaagaa actttgccgc cttcagggtg aagtctcggt gctggttgcc agcagccgcc
     7201 gactacaggc gctcaaccgc caatttcgcc gcaaaaacaa agccacagac gtgctgtcat
     7261 ttccacgcga aaatggcggc gacatcgcga tctccgcaga catcgcgcgc gccaacgccg
     7321 cccggcttgg ccactccgca ttgagcgaat tcaaaatact ggtgcttcac ggcatgctcc
     7381 acctggcccg ctatgaccat gagcgcgatg acggcgagat gcgccgcaag gaatcgcgcc
     7441 tgcggaaaga gctgaagctg ccggattcgc tgattgagcg cacgcatgca aagaagtcgc
     7501 gcgcaaagag cggcacaaaa agaagaggcg gccaatgatt gcggcgatct ccatttacgt
     7561 cgcgatcctt gggctctgcg cactgctcac gctggtctct tacattgagc agctctatac
     7621 ggagtcggga aagtttctgg cccgcgagtt ccaggaaaat gtcgacgcat ttgaaaacct
     7681 gattgagccg cggctgggaa tgatcagcag ccgggcggcg ctctccatcg cgctgctgga
     7741 gcagttctgc accgccacca tcacgcttct gatcgggtat ctcatcttcg ccgagcagcg
     7801 ctggaccgtg ccggaaatta tccaggcggc ggtggggatt atcctggtca tcattatctg
     7861 caaccgtctg ctgccctacg tgctgttcac gcgcacgcgt ggcgtgtggc tggtgcgtta
     7921 cgtccggctg atcaaatttt tgatctacct catgctgcct attagcgtgg tgctcggctt
     7981 cgggctctcg gtggcatctc tttccaagcc gcatgagccg gaagagccgg agcatccttc
     8041 tgaagcggtg gacgcgctga ttgaagccgg tcaggaagag ggcattctgg aagagagcga
     8101 ccgccagctg atccagtccg tggtggaatt cggcgacaag acggtgcgcg aagtcatgac
     8161 gccgcgtccg gacatcttcg ccgtctctgc cgagaccacc atcgcggaat ttactgagat
     8221 gctgcgggaa aaaccgcact cgcgagtgcc aatctacctc tcgaatatcg ataacataca
     8281 gggcatggtg ctggcgcacg acctcatcca gattgatgac gcggaggcca gcaccaccat
     8341 ggtgcgcaag ctcatgcgcc cggtgctgtt cgtgccggag accaagaaga cctcacagct
     8401 tctgcgggaa atgcagagag aaaacatcca catggccatt gcgattgacg aatatggatc
     8461 ggtagcgggc attgtgacaa tggaagacct ggtggaagag atcgtcggcg aaattcgcga
     8521 cgagcatgag gaagaaaccg acgtaatcaa agaaagcgaa ggcgcttacg tgatgaaggg
     8581 caacgtggac gtgggccgcc tggaagacct ttttgagacc cacctggaca cgcatgaagc
     8641 ggcgacgatc ggcgggctgg tgagcgccat tgttggacgc atcccgcagc cgggcgaagt
     8701 gattgaagaa tacgggctca agttcgaagt gctggaatcg acggaccgca aagtggaaaa
     8761 gctgcgggtg tgcaggtcga agcctgagga gcgggccgag caggcaattt agcagttagt
     8821 aattattcaa acgtgttcac cacaaagggc acggaagcag atcgccgtaa tcgccgtaat
     8881 cgcgcggaat ccccgtaatc ggaaagctaa acaccgttaa ccgcagtcgt ccatgggatg
     8941 tatcccacac agagaacatg aaatggttcg tcgtggctca cgcccggcgg cagcggagcc
     9001 gatctctcac cgctccccgt cacgtcgctc cgctcgttcc gactcgggat tcgagatggg
     9061 tccatcagag ggagagagtc tggaaagcgt gacgagcatg gataaggaag ctgtttttca
     9121 gggcagagga acacggacgc aggtgtctgg ttttactacc aggaacactg aagaaatgca
     9181 ccacagctac catggacggg gaccagccac tatccagcgc cgcaggcgcg acatgagtta
     9241 gcccaaaccg gcaggtgtgg gtagccgatg ttatacattt ttgggagtcc cggaggggcg
     9301 acaccttgcc acacacctac tcgcagaatt atctgcatgt tgtgttcagc acaaaagagc
     9361 gccgcaagtt aatcacgcgg gaaatgcagc cgaaattgtg ggcctatctt gccgggattg
     9421 ctcgcaacca cgattttctg gtgctcgcga acggcggcat ggaagaccat gttcatttgc
     9481 tgatccaact tccgccggtg ctcgccctgg caaaggccgt ttcaacgctg aagtcgaact
     9541 cctcccgatg gatgagcgag catgggtcat ggttcgcgtg gcaggaagga tatggcgctt
     9601 tcagcgtgag tgcgtcgaag ttgggcaccg tggaatcgta cattgccaat caggaacgcc
     9661 atcatcgcag gatcacctat gaagacgagt ttctggg
//
LOCUS       DASQYP010000404        19627 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_168655, whole genome shotgun sequence.
ACCESSION   DASQYP010000404 DASQYP010000000
VERSION     DASQYP010000404.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 19627)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19627)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19627
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_168655"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            165..599
                     /gene="tnpA"
                     /locus_tag="VE783_13080"
     CDS             165..599
                     /gene="tnpA"
                     /locus_tag="VE783_13080"
                     /inference="COORDINATES: protein motif:HMM:NF033573.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS200/IS605 family transposase"
                     /protein_id="HYX54383.1"
                     /translation="MSHTYHQLMAHVVFSTKGRRKLIPKENQSRTWTYMARICESENF
                     HALEIGGMDDHCHALIRIPANMTLADAVKNLKAKSSKWLGTNFEWQRGYAAFSVSQSN
                     VNAVVKYIRNQESHHKKMTFEEEFIAFLEKHGIPYDPKYVFD"
     gene            857..1540
                     /locus_tag="VE783_13085"
     CDS             857..1540
                     /locus_tag="VE783_13085"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX54384.1"
                     /translation="MHRFLLPCLLAIFSACSFAQPTTPRQKQPQEVRITAQQLNQLRP
                     VLEKDLAVLLKTVYNDPPTPADIQYEFLHCQFTPLHLGALGPAILVEAQAGHGAQANA
                     ALLNIYLPEKNSYRRILEGAGFGPEIGMPLRPIPDLIFVWASGVCHAVYEHYRYNGKK
                     YERDACDQQPGDAATGDTCGVKRCENSSLPTFPDPEAGADNPSAPAPPTEDYIVGTPR
                     TGKEILNSK"
     gene            2383..2805
                     /locus_tag="VE783_13090"
     CDS             2383..2805
                     /locus_tag="VE783_13090"
                     /inference="COORDINATES: protein motif:HMM:NF015729.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CidA/LrgA family protein"
                     /protein_id="HYX54385.1"
                     /translation="MLGCLFFAVLYLAGDYLSTRFALPIPGSIIGLGMALGFFTLRGK
                     VDASIRPCANLLLRYLPLLLVPVGAGVIRIVNAPPAGLWRLEAVLIMALFMGVLGTAK
                     IAEGLLAQGTRGLTAQAAEDSIGSGDREIGSSGERNKL"
     gene            2830..3528
                     /locus_tag="VE783_13095"
     CDS             2830..3528
                     /locus_tag="VE783_13095"
                     /inference="COORDINATES: protein motif:HMM:NF016088.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LrgB family protein"
                     /protein_id="HYX54386.1"
                     /translation="MTTLHGFVDSLVLVTLTIALYAVGVWLYQRLGRIGALQPVLIAI
                     FFVVLGLKLTGFSYDRYWAGTKALHFLLGPAIVALAVPLYENLQKERRVMWPVLGTLL
                     AGGVWVTGSALLLGVIFRLDHLMLISLTTKSVTVPIALAIAEKIGGVAPLTVISVFTT
                     GITGIICTPAFLRWARVTDPAVSGFTLGLTSHAFGVVRALELGSEAVAFASLGMVLMG
                     CASAVIVPAIFRLL"
     gene            complement(3579..4298)
                     /locus_tag="VE783_13100"
     CDS             complement(3579..4298)
                     /locus_tag="VE783_13100"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX54387.1"
                     /translation="MLFSAVLAIHIAAGTVGLFSGAAAIAFRKGSRRHGRAGNVFVAA
                     MLGLATSAVYLAIVKHQIPNVLGGIFTSYLVSTAWLTARRRDAATDLRDWAGLIVVLG
                     LAAVYFTCGFRAAQSATHSIYGYRAPLYFVSAALALLSAVGDVRMLVRGGITGTQRLA
                     RHIWRMCYGLFVASGSIFLARPHLFPVLLRRSGVLVVLGFLPLAFMIFWLLRIRVARA
                     HRKSPAGGAYGPQASLTAVGS"
     gene            complement(4390..5313)
                     /locus_tag="VE783_13105"
     CDS             complement(4390..5313)
                     /locus_tag="VE783_13105"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX54388.1"
                     /translation="MNSPSNAATESPATQQEVATVTPSRTRPFYWSVRRELWENRFLY
                     IVPLAAGGLFVIGFLVNVIRMRSHLRNAPWTHENFAIPYEIVAALVMGTALLVGLYYS
                     VDALYGERRDRSILFWKSLPVSDATAVFSKLMIPLVFVPLLSYVITVAAQLVMLMLSS
                     VVLLGSGVDVGAVWTHSGFLRASGIMLYHIVTVHGLWYAPIYGWLFMVSAWAPRAPLV
                     WAALPPFVIYGLEKVAFNTEHFLSLLEERFLGPETHGLMAATSGGSPTHSSSTLIPHN
                     FFSEPGLWIGLAVAAVFIAAAVRLRRYRGPI"
     gene            complement(5310..6179)
                     /locus_tag="VE783_13110"
     CDS             complement(5310..6179)
                     /locus_tag="VE783_13110"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HYX54389.1"
                     /translation="MACIEARGLRKAFGKTVALDSVNLRVEDGRILGLVGPNGAGKTT
                     ALNAILGLTPYDGELRVLGRNPWTERDQLMRDVCFIADVAVLPRWIKVSQAIEYVAGV
                     HPRFDRTKAESFLARTTIRHESKVKELSKGMVAQLHLALIMAIDAKLLVLDEPTLGLD
                     IIYRKQFYDSLLTDYFDRQRTIVVTTHQVEELQNVLTDLMFIDRGRIVLNCSMDEFES
                     RYVEVLVRPEQLAAAQALQPVHERAVLGGSILLFDGVDRAQLGSFGDLRTPSIADLFV
                     AVVGAGQSQGAVV"
     gene            complement(6184..6594)
                     /locus_tag="VE783_13115"
     CDS             complement(6184..6594)
                     /locus_tag="VE783_13115"
                     /inference="COORDINATES: protein motif:HMM:NF012610.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HYX54390.1"
                     /translation="MTLEFNDGQPIYRQLRDRVVEMILDGVLKEGDPLPSVRTVAAEY
                     RVNPLTILKAYQQLVDEELVEKRRGLGMFVRNGARNLLLEGERQKFLQEQWPKVYATI
                     QRLGLNPKELLNGSAARDSVAVAEPEPKPARKES"
     gene            complement(6625..7221)
                     /locus_tag="VE783_13120"
     CDS             complement(6625..7221)
                     /locus_tag="VE783_13120"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX54391.1"
                     /translation="MKSLRFMLAVTLLWLCTMAFAQTPAPKQTQPQSDAQKAFTLMKT
                     LAGSWEGKPSVIPPLPGESDVPGLMQVSFRVTSRGNALVHEMTGKDSKPGPASTDQDD
                     PITMFYVDGDRLLLTHFCDAGNRPRMVARLSPDGKTIEFDFLDISGKMLTHHMQHAVF
                     TVIDANHHTEDWTFQMGDKPVHAHVELQRVKSQEALAR"
     gene            complement(7430..8077)
                     /locus_tag="VE783_13125"
     CDS             complement(7430..8077)
                     /locus_tag="VE783_13125"
                     /EC_number="2.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HYX54392.1"
                     /translation="MAEIKSGFNPCQNPAGLPGRFVLWLMNRRHSQVTDWGLSHVSVG
                     ESDTGLDVGCGGGRTISKLAQMAIEGKVYGIDPSAQSVAVSSKVNGKSIDSGRVEVRQ
                     ASVAQLPFLDNMFDLVTAVETHFWWPDIPAGMREILRVLKPGGTLVIIAEVYKAANAK
                     LRKMEDVIARSGLKLLTTDEHRALFESTGYVHVRVFTEPKKAWICCVGEKLRRPE"
     gene            complement(8235..9071)
                     /locus_tag="VE783_13130"
     CDS             complement(8235..9071)
                     /locus_tag="VE783_13130"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX54393.1"
                     /translation="MLQLLSAAGIRPGQVSRATAGGRIFRATILLLLLLALVNCSAFA
                     QGGPPFYTNDPGTPGNLNLEVNVSYMPFLYTDQSVSHLPDLDINLGLGKRVQLTYENA
                     WLRVQAPDAAAKFGLGQSNLGIKWRFYEGGDRGISLSFFPQVLLNNPNNSTERGITAE
                     GNSFLLPMQFTKDFGAVSVDCEGGYQLVQKAPNGWLAGVVVGRKISDKLEIAAEVYSQ
                     GAFHSVEAQPTVDAGARYKVGKLWLLMMAGRSLQASSSTQSSFVGYFGVQMQMHKKPW
                     KW"
     gene            complement(9220..9990)
                     /locus_tag="VE783_13135"
     CDS             complement(9220..9990)
                     /locus_tag="VE783_13135"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX54394.1"
                     /translation="MPEVSTASRKKLLLPQDAKLEELIHDSSPEILIAVAADARLTED
                     LALAFLERRDLPPQALEELARHSLVAKIRKVRIALVTHSHTPRHVSVPAIRQLYPFEL
                     MQIALTPAVAPDVKRAAEEGIIARLATVSSGERFTLAKRSSGRVAAALLHDKEERILT
                     AALLNPQMIEAHVVKALKAEAGTELLAPLVAKHPKWSFRNDVRAALLANRYTPFAAVV
                     KIAAELPLLQLKDALRSMRLPANVKSYVAGMVAKRSGG"
     gene            complement(10009..11037)
                     /locus_tag="VE783_13140"
     CDS             complement(10009..11037)
                     /locus_tag="VE783_13140"
                     /inference="COORDINATES: protein motif:HMM:NF013986.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BadF/BadG/BcrA/BcrD ATPase family protein"
                     /protein_id="HYX54395.1"
                     /translation="MKKILPNVVRRKLAFGAASIIEDKFGKTKTLFAGDGLHLLCMAL
                     YLGVDAGGTKTECAVSNGAELLGQAVGPTCKLAYVGKEKGRENLQRVMEHAAEAARVL
                     VRDVQHVCIGMSGASLPESVSWAQETVREIIPQATIYVAGDHLIAHRAAFGTSHGVLV
                     ISGTGSIAFGRNQAGETARAGGWGPSISDEGSAFWVGREAVAAALRSYDHGVKNGLLA
                     VIAEMWNVAPEEVVRRANSAEPRFPELAGAVSSEAEKGDPTAREITERAGVALAGLAS
                     AVIERLWPSGGVVPVALAGGVLQNSTIVRQAFRNAVKEKHPEAAVSFAFVRPVMGALE
                     IAAHRGRR"
     gene            11058..12521
                     /locus_tag="VE783_13145"
     CDS             11058..12521
                     /locus_tag="VE783_13145"
                     /inference="COORDINATES: protein motif:HMM:TIGR00813.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium:solute symporter"
                     /protein_id="HYX54396.1"
                     /translation="MRLHSVDIIIIVAYLIGITFFGLRFRKSQRSMRDYFLADRTIPW
                     WAIALSIVAAETSTLTVIGTPGIAYAGNFGFLQVVFGYLLGRIVICLIFIPQYFRGEM
                     FTAYQLIDRRFGPALHKITAAVFLITRAAAEGVRVWAVAIVVGIALGTGEIASVAIVL
                     LLTLIYTFEGGLAAVIWTDVVQLIIYVAGTIVGFFTLLHLVPGSWPAIHASAAAAGKL
                     QVLDFTFSLSKTFTFWAGLIGGTFLTTATHGTDQLLVQRLLAARGRREAQGALLTSGV
                     VVLVQFTLFLLMGAALWVFYGMNPPTQSFTKTDYIFPSFIVDHMPHGISGLLIAAILA
                     AAMSNLSAALNSLSSTSMVDFYLRRRPATTERTRLQLSRVATIIWGIVLFGLALASRY
                     GGSVLEKGLSIASVAYGGLLGVFLLGLLTRRATQSGAIAGMLCGLALNIYIWFQGHIA
                     WTWYVTIGSCATFIIGYVASLFTAPARQPETAAASDS"
     gene            12633..13412
                     /locus_tag="VE783_13150"
     CDS             12633..13412
                     /locus_tag="VE783_13150"
                     /inference="COORDINATES: protein motif:HMM:NF015679.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase family protein"
                     /protein_id="HYX54397.1"
                     /translation="MSFTGANAKEPAATRPSTQMIVVTTADWSAPQGTLRRYERGGPG
                     QSWHAVGEPITVMVGKNGLGWGADLMKVAAPIRDASDPAKKEGDGKAPAGAFHLAKAF
                     GYAPQPQPGWKMPYVNLSSSVECVDDTASKFYNQVVDRSTVTADWNSSEHMLRDDELY
                     RWGLIVDYNSGPAVPGSGSCIFMHIWRGPGQPTVGCTAMPQASIEGLLSWLGPASKPL
                     LVQLPEAKYEMLRKHWNLPQIADRAASKGSTMHSGANPVGK"
     gene            13426..14832
                     /locus_tag="VE783_13155"
     CDS             13426..14832
                     /locus_tag="VE783_13155"
                     /inference="COORDINATES: protein motif:HMM:NF024910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HYX54398.1"
                     /translation="MATPAAVEQHRPELVRELNAWHATSIVAGTIIGSGIFLVPAEMM
                     QAVGTAKLVYLAWLVGGALSFFGALTYAELGAMRPFAGGEYVYIRDAYGPLPGFLYAW
                     SWFLIAKPASIASITAGLVRILSSFSAFGFLPHRIFSIGSYGVTWGQLVAIAATILIS
                     VINYLGVRKAGNFQLVFTALKVVMIVVIIAAAFTATSGTWSNFGTAFTGAKGGMAGFM
                     LALVAALWAYDGWNDLNMVSGEIHHPERNIPIALIAGVALVAVLYIGVNGAVQYVMPA
                     TAVAGAPVPAAAATQIALGRVGALIVSAGMALSLLVTLNGTIMSGGRIPFAIARDGYF
                     FKALAEVHPRFHTPSLAIVVQAVMSILLLLGGGGFKDFIELAIFAEWLFYMIAASTIF
                     VFRRREPERDRAYRTWGYPVVPALFVVAAAVLLYYTFMDKLHTSAVGTIIMTLVIFAG
                     VPVFYYFSRRRDNSIASS"
     gene            14836..15792
                     /locus_tag="VE783_13160"
     CDS             14836..15792
                     /locus_tag="VE783_13160"
                     /inference="COORDINATES: protein motif:HMM:NF023828.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3667 domain-containing protein"
                     /protein_id="HYX54399.1"
                     /translation="MSTHAAPERSVLKEGAAACAGCGTPLTGPYCSQCGERVLDHHQL
                     SVWHFIQHNIIHEFSHVDGKIARTLRYLFFRPGFLTEEYFAGRRLAYVNPVRLLLTAV
                     IAFALLVHGSGFAVMTIGKLRLSMLPPGIPETLSIHDTVSQLDLFGVLSGRLANVRQH
                     NDIEKEVVIAKFQHELRNYSTALSFGNVVLLAGLLFLLFHRRRRYFLEHLVYALHVAC
                     FVLFFSIIPLNIFRLLFILSHGNLAKGTALAVMVVTMFLEIVYLHRSMLRFYFADDVR
                     NRRGWGGAAWATRGAALLVFVGNSAALTLVYFVGAAIALARI"
     gene            complement(16000..17484)
                     /gene="glgA"
                     /locus_tag="VE783_13165"
     CDS             complement(16000..17484)
                     /gene="glgA"
                     /locus_tag="VE783_13165"
                     /EC_number="2.4.1.21"
                     /inference="COORDINATES: protein motif:HMM:NF001899.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycogen synthase GlgA"
                     /protein_id="HYX54400.1"
                     /translation="MNIVFAASECVPYSKTGGLADVVGALPQALASLGHNVSVYVPRY
                     RQTRLANAKTALRSITIPFDDQYRFCSVLDGGKNAGVQFYFIEYPQFFDRDALYGTPA
                     GDYPDNAERFALFSRAVLEATKILGVPDIFHCHDWQSALIPVLLRTSYLDDPVFHNTA
                     TVFTIHNMGYQGLFPPDILPLLMLPWDLFTMDKMEYWGKVNFLKGALGFSDYITTVSR
                     KYSQEIQTAEFGFGLDGVLRDRAGTVTGILNGVDYNEWSPEKDKLIVRQYSPEKLEGK
                     RECKYDLLRQFGLESADASLPVIGIVSRFAAQKGFDLIAEVADDMAQLPVIFTILGSG
                     DKEYQDLFIKLNRLYPEKFAVKVAYDNTVAHKIEAGADMFLMPSRYEPSGLNQMYSLK
                     YGTVPIVRATGGLDDSIEPWDAATGKGTGFKFVPYSAAQLLNTIHDAINAFRDKPNWN
                     KLMLNGMAKDFSWTASAREYVKIYERLCPPKAPGQEKVLEFSRA"
     gene            17622..18464
                     /gene="rsmA"
                     /locus_tag="VE783_13170"
     CDS             17622..18464
                     /gene="rsmA"
                     /locus_tag="VE783_13170"
                     /EC_number="2.1.1.182"
                     /inference="COORDINATES: protein motif:HMM:NF012616.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000179 - rRNA
                     (adenine-N6,N6-)-dimethyltransferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA
                     (adenine(1518)-N(6)/adenine(1519)-N(6))-
                     dimethyltransferase RsmA"
                     /protein_id="HYX54401.1"
                     /translation="MRTAQKPKLGQNFLADRSAAAKIVDALGDISHSLVVEIGPGKGA
                     LTDTLAQRAGRLIAIELDRLLATELRFKYSRFPNVEVLEGDVLKIDFRTVLRRSAGPL
                     TDLRPVKPEPARVVGNLPYYITSDILLRLFEYHDLLATIVIMVQREVADRIAARPGSR
                     DYGLLSATAQLYCRVDNLFTLPPGAFAPPPKVHSSVLRLTVAPRFSELQVEPAPFIQF
                     LKLAFAMKRKTLVNNLKSAYADAAIKSALKAAGLRADVRAEAVELGQMAEVFRALMGQ
                     QLTQ"
     gene            complement(18627..>19627)
                     /locus_tag="VE783_13175"
     CDS             complement(18627..>19627)
                     /locus_tag="VE783_13175"
                     /inference="COORDINATES: protein motif:HMM:NF042645.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF6600 domain-containing protein"
                     /protein_id="HYX54402.1"
                     /translation="SDPLEVAVFKGEVAVRDTGYGKDIAVKKNETFTLDVLDSGRYDL
                     EKEASADELDRWSDQRDHDLSSYASAQNYTQSPYQYGVGDLGYYGQFYDIAGYGNLWQ
                     PYGIYPGWDPFMNGYWNYSPGFGYCWVSAYPWGWMPYRYGHWVFINGRGWFWQPGAWS
                     GWARAPRFVNPPHGFQAPAPPPLRAGTGIAPGRQPGISIVGGRPSQPGRVRIDQDEPS
                     VRMPGHPGEGMGTRPAIETRHQAPPPATSIQEPAAPAGEPAHHESAPAPRVEREQPHP
                     LPHVEREPARPIAPPPASVPHSEPAPHVAPPAPSVPHSAPAPHISAAPHVSAPVHK"
BASE COUNT         3888 a         5951 c         5623 g         4165 t
ORIGIN      
        1 aacagtccgc gtgagcttcc atattccgag cgccggaggc gcgatgtgag cgtagccccc
       61 ggtggagcgc agcggagcga agcgtaaccg ggggtacacg ccaagaaaat tcagagcacc
      121 gtaggtgcga caccagataa aatcctcaac ccggagaacg aaccttgtcc cacacctacc
      181 atcaactcat ggctcacgtc gtcttcagca ccaagggccg ccgcaaactc atccccaaag
      241 aaaaccaatc ccgcacctgg acatacatgg cccgcatatg cgaatcggaa aatttccatg
      301 cactggaaat cggcggcatg gacgaccact gccacgccct cattcgaatt cccgccaaca
      361 tgacgcttgc cgacgccgtg aaaaatctca aggcgaaatc ctcaaaatgg ttgggcacaa
      421 atttcgaatg gcagcgcgga tacgccgcat tcagcgtgag ccaatccaac gtgaacgccg
      481 tagttaaata catccgcaac caggagtccc atcacaagaa aatgacgttc gaagaggaat
      541 ttatcgcgtt tctggagaaa cacggcatcc cctacgatcc gaaatatgta tttgattgat
      601 gccgcgccta cagcgctctt catcaggggg acgcataccc ccggttgcgg cgctgcgcgc
      661 ctccaccggg ggctacgctc acgtcgcgcc tctggcgctc ggaatgtatt aatccgcaac
      721 cttcacatgc tttctcatga gcatgtggcg attagcgcct ttctggaacg tccacgctcc
      781 tcaggccgta ggcccacggg gagcgcgccc caaaatcccc actcctcact cctgcccact
      841 cgctacaata ctgcccatgc accggttcct gctgccctgc ctgctcgcga tcttctctgc
      901 ctgctctttc gctcagccaa ccacgccccg gcagaagcag ccgcaagagg tgcggatcac
      961 ggcgcagcaa ctgaaccaac tgcgaccagt cctggagaag gacctggccg tgttgctcaa
     1021 gactgtttac aacgatccgc ccacacccgc cgacattcag tacgagttcc tgcattgcca
     1081 gttcacgcca ctgcatcttg gcgcgcttgg gccggccatc ctggtggagg cgcaggcagg
     1141 ccatggcgcg caggcgaatg cggccctgct gaatatctac ctgccggaaa agaactctta
     1201 ccgccgcatt cttgagggcg ccggctttgg gccggagatt ggcatgcctc tgcggcccat
     1261 ccctgacctc atttttgtat gggcctcggg agtctgccac gctgtctacg agcattaccg
     1321 ctataacggg aaaaaatatg agagggacgc ctgcgaccag cagcccggag acgcggccac
     1381 cggcgacacc tgtggagtga agcgctgcga aaactcatcg ctacccacct tccccgatcc
     1441 cgaggccggc gcggataacc cctctgcgcc tgctcctccg accgaagact acattgtggg
     1501 cacgccacgc actggcaagg aaatcctgaa tagcaagtaa ggggatgggc agctgggtgg
     1561 tcacgccgct gcgcccagag tggtggacgc atggggagcg ggcgggcacg agctacaacc
     1621 cgagccggcc ggtaaagttg cgcttttatt ttcttttttc atcgtgcttt tctgcttgac
     1681 aggaaacgta atccaggcga agatgagaat cggcagaaca gcaattctgc cgcaatcacc
     1741 gcaagccctg ggcggtcctc gtccagacgt gcggccctga tcttgaattc ctgggccgcg
     1801 gttttccaga accagactgt tacagcaagg aacgcaagag cgagcttccc aggaggcccc
     1861 gcgcaggcgg gatgggttct ttgataactg aatattcaag tttgtgaatg catgcggcat
     1921 tcattgcctg gggtgtccgc aggtaatgcg tgtttgacaa ttcagcaatt ggcaaacagc
     1981 aattggcaat tggccagtca tgaggtgttg gcaacctggt aaaccggagt gagccggcga
     2041 ggcgtgagaa agtacacgga gcttcccgaa tattccggga agctcgccgg ggagggtccg
     2101 gcgagctctg acgtaagtct tttgttttcg gggaggggta gggggtaccc cggggggctt
     2161 tacgtggtta accaagtagt acttttcgtg atggtggaac gttgtgacaa tcggggatat
     2221 cacctctctg acctctccgc tctctgcggc tcaaagtttc gtttttctcg attccggcga
     2281 ttacggcgat ccggcgatta cggcgattac gtgcaattac ggcgatcacg ctcgattctt
     2341 tacaatgtcc tgcttccagt ttccgcagaa gggactccat tcatgctggg ctgtctgttc
     2401 ttcgctgtgc tctatctggc gggcgactat ctttccaccc gctttgcgct gcctattccg
     2461 ggctcgatca ttgggctggg aatggcgctc ggcttcttta ccctgcgcgg caaagtggac
     2521 gcctctatcc gtccctgcgc gaacctgctg ctgcgctatc ttcctctgct gctggttccc
     2581 gtgggcgcgg gcgtgatccg cattgtgaac gcgcctcccg ccgggctgtg gcggctggag
     2641 gcggtgctca tcatggcttt gttcatgggc gtgctgggca cggcgaagat cgcggagggc
     2701 ttgcttgcgc agggaacccg gggactcacc gcacaggccg cggaggactc aatcggatcg
     2761 ggtgatcggg agatcggctc atcgggagag cggaacaagt tgtgatcgcg caaccttgat
     2821 cgcgaactta tgactaccct acatggcttc gtcgattccc tcgtgctggt cacgctcact
     2881 atcgcgctat acgcggtggg cgtgtggctt tatcagcgcc ttggcagaat cggcgccctg
     2941 cagccggtcc tgatcgccat cttctttgtg gtgctcgggc tgaaactcac tggcttctct
     3001 tacgaccgct attgggcggg taccaaagcg ctgcatttcc tgctcggccc cgcgattgtg
     3061 gctctcgccg tgccgctcta tgaaaacctg cagaaggagc gtcgcgtaat gtggcccgtg
     3121 ctgggcactc tgctcgccgg cggcgtctgg gtcaccggca gcgcactgct tctgggcgtg
     3181 atcttccgcc tcgaccacct gatgctgatc tcgctcacga cgaagtccgt aacggttccc
     3241 attgcgctgg cgattgccga gaagatcggc ggcgtggcgc cgctgaccgt catcagcgtc
     3301 tttaccaccg ggattaccgg aatcatctgc acgccagcgt tcctgcgctg ggcgcgggtg
     3361 acggatccgg cagtcagcgg ctttaccctg ggtctgacgt cgcacgcctt tggcgtggtg
     3421 cgcgcgctgg aactcggcag tgaagccgtg gcgttcgcgt cgctgggcat ggtgctgatg
     3481 ggctgcgcca gcgcggtgat agtgccggcg attttccggt tgctgtgaaa agtcacccct
     3541 ctcccgcaac ggctcgcaga agttggagag gaagaagctt aggaacccac tgcggtcaga
     3601 gaagcttgcg gcccataagc gccgccagcc ggcgattttc tgtgggctct ggccacgcgg
     3661 attcgaagca gccagaagat catgaaagcg agcggcagaa atccgaggac gaccagcacc
     3721 ccggatctcc tcaggagaac gggaaacagg tgcggccgcg cgaggaagat ggaacctgac
     3781 gcgacgaata gtccataaca catgcgccag atatggcgtg ccagacgttg cgtaccggtg
     3841 atgccgcccc gcacgagcat gcgaacgtcg ccaacggcgg agagcaaagc cagcgcagcg
     3901 gagacaaagt acagcggagc gcgatatcca tagatcgagt gagtggcact ttgcgccgcc
     3961 cggaagccac aagtgaaata gacggccgcg agtcctagca ccacgatgag cccggcccag
     4021 tcgcggaggt ccgtggctgc gtctcgacgg cgcgccgtca accatgccgt cgacaccagg
     4081 taggacgtga agattccgcc gaggacgttc gggatctggt gctttactat cgccagatat
     4141 acggcgctcg tggccagccc gagcatcgcc gctacgaaca cattgccggc gcggccatgc
     4201 cggcgcgagc ctttgcggaa cgcaattgcc gcggctccgg aaaacaaccc gacagttccg
     4261 gcggcaatat gaatagcgag aacggccgaa aataacatgt cttctcctta cgcgcgcgtg
     4321 tggcgcatct gagccgcctg aataggcagc ttgagttcgc ttcaaaggga tgagttcttg
     4381 tggtttagct cagatgggac cacgatatcg tcgtagtcgc accgctgccg caatgaatac
     4441 cgccgcaacc gcgagtccga tccacaggcc cggttcgctg aaaaagttgt gagggatgag
     4501 cgttgatgat gaatgcgtgg gcgacccgcc ggaggtggcc gccatgagcc catgggtttc
     4561 cgggcccagg aatcgctcct ccagcaggga aaggaaatgc tcggtgttga acgccacctt
     4621 ctccaatccg tagatcacga acggcggcag ggctgcccat accagcggcg cccgcggcgc
     4681 ccaagccgac accataaaaa gccagccgta gatgggcgcg taccagaggc cgtgcaccgt
     4741 cacgatgtgg tagagcatga ttcccgaggc ccgcaaaaat ccggagtgtg tccacaccgc
     4801 gccaacgtca acgccgcttc ccagaagcac cacactgctc aacatcagca tcacgagctg
     4861 cgcggcaacg gtgatcacgt aactgagcag tggaacaaag acgagcggga tcatgagctt
     4921 tgaaaaaacc gcagtggcgt cggaaaccgg aagcgatttc cagaagagaa tgctgcggtc
     4981 gcggcgctcg ccgtaaagcg cgtcaaccga ataatacagc ccaaccagga gcgcggtgcc
     5041 cataaccagc gccgccacga tctcgtaggg aatcgcgaag ttctcatggg tccacggtgc
     5101 attgcgcaag tggctccgca ttcttatgac gttgacgaga aagccgatca caaacaagcc
     5161 cccagccgcg agcggaacaa tataaaggaa tcggttttcc catagttcac gccggaccga
     5221 ccagtaaaag ggccgggtac gcgaaggcgt aacggtggcg acttcctgct gcgttgccgg
     5281 tgattcggtt gctgcatttg agggggagtt cataccaccg ctccttgcga ttgtcccgcg
     5341 ccaactacgg cgacgaacag gtcggcaatg ctgggcgtgc gcagatcgcc gaagcttccg
     5401 agctgtgcgc gatcgactcc atcgaacagc agaatgctcc cgccaagcac cgcgcgttca
     5461 tggaccggct gcagggcttg tgctgccgcc agttgctccg gacgcaccaa aacctctaca
     5521 tagcgtgatt cgaactcgtc catgctgcaa ttgagcacga tgcgcccgcg atcgatgaac
     5581 atcaaatccg tcagcacgtt ctgcagctct tccacctgat gtgtcgtcac cacgatcgtg
     5641 cgctggcggt cgaaatagtc tgtcaggagg gagtcataaa actgcttccg atagatgatg
     5701 tcgagcccca gcgtcggctc gtccagcacc agcagtttcg cgtcaatagc catgatgagc
     5761 gccaggtgca gctgcgccac catgcctttc gaaagctctt tcaccttgct ctcatggcgg
     5821 atcgtagttc gggcaagaaa gctctccgct tttgtgcggt cgaagcgcgg atgcacgccg
     5881 gccacgtact cgattgcctg cgagaccttg atccacctcg gcagcacggc aacatcagca
     5941 ataaagcaga catcgcgcat gagctggtcg cgctcggtcc agggattgcg tcccagcact
     6001 cggagttcgc cgtcatatgg cgtcaggccg agaatcgcgt tcagcgctgt ggtcttgcct
     6061 gccccattcg ggcccaccaa tcccagaatg cgcccgtctt ccacccgcaa attcacgcta
     6121 tccagcgcta cggtttttcc gaaagccttg cgcaggccgc gtgcttcgat acaggccatg
     6181 tcctcagctc tcctttctgg ccggctttgg ctcaggttca gccacggcca cgctatctct
     6241 ggctgcggag ccattcagca gttctttggg attcaggccg agccgctgga tagttgcgta
     6301 caccttcggc cattgctcct ggagaaattt ctggcgctcg ccctccagca gcagattgcg
     6361 agcgccgttt ctgacaaaca tgcccagacc tcgccttttc tcgacaagtt cttcgtccac
     6421 cagttgctga tacgccttga ggatggtcag aggattcacg cggtattccg ccgccaccgt
     6481 ccgcaccgaa ggcagggggt ccccttcctt gagaacgcca tcgagaatca tctcgaccac
     6541 gcggtctcga agttgccggt aaatcggctg gccgtcattg aactcaagcg tcattctgtt
     6601 cctggtggtt gtttcctgat cccactatcg ggctagagct tcctggctct tcactcgttg
     6661 cagttccacg tgcgcatgca cgggtttgtc tcccatctgg aaggtccagt cttcggtgtg
     6721 atgattggcg tcaatcaccg tgaacacggc atgctgcata tggtgggtca acattttccc
     6781 agatatatcc agaaagtcga attctatcgt cttgccgtcc ggcgaaagcc tggccaccat
     6841 gcgcggtcgg ttcccggcgt cacaaaaatg agtcagcagc aggcggtcgc catcaacata
     6901 aaacatggtg atgggatcat cctggtcggt gctggcaggg ccgggcttac tatctttccc
     6961 ggtcatctca tgcaccagag cattacccct tgaggtcacg cggaatgaaa cctgcatgag
     7021 ccctgggacg tctgactctc caggcaaagg cggtataacg ctcggcttgc cttcccagct
     7081 tccggccagg gtcttcatca gggtgaacgc cttctgcgca tcagattgtg gttgggtttg
     7141 cttcggtgcc ggggtttggg cgaaggccat ggtgcacagc cataacaaag taactgccag
     7201 cataaatcgc agcgatttca tgtttttcaa tccttcctct gattgcagcc tctgtgctgt
     7261 atcagtagtg ttatacttaa ctataacact atatgtcagt caagaggatt ttgcgaaaaa
     7321 tcgaacctta gagacttatg tcgctgaaaa caagctggat agttcgtttt ttttgtaatg
     7381 atgcactgag aaatggagcc gcagcttgga aaaagtgcgg attccctgac tactctggtc
     7441 ttctaagctt ctctccgacg cagcagatcc atgccttctt gggttcggta aagacgcgca
     7501 cgtgcacata gccagtgctc tcaaataaag cgcggtgctc atccgttgtg agcagcttca
     7561 atcctgaacg ggcgattaca tcttccatct tccgcaactt cgcattcgct gccttgtaga
     7621 cttcagcaat gatcaccaga gtgccgcccg gtttgagtac gcgcagaatc tcgcgcattc
     7681 ccgcaggaat gtcgggccac caaaaatggg tttcgaccgc cgtgacgaga tcgaacatgt
     7741 tatcgaggaa cgggagttgt gcgaccgacg cctgcctgac ctcaacgcgc cctgagtcaa
     7801 ttgatttgcc attgactttg ctgctcactg cgacgctctg cgcggacggg tcaatgccat
     7861 agacctttcc ttcgattgcc atctgggcga gctttgagat cgtccggccg ccgccgcatc
     7921 ccacgtcgag cccagtgtcg ctctccccta cagaaacgtg agataggccc cagtctgtta
     7981 cctgcgaatg ccgccggttc atgagccaca agacgaagcg gcccggcaaa cctgccgggt
     8041 tttggcacgg attgaagcca ctcttgatct cggccatgaa ttttctcctg gggtagcaaa
     8101 gaacgttata tggccagcga atcacgaata ctacaagaac tttccgcagg ccccggcgtg
     8161 gaccttcaag ccgcagaaag ttttcaatgc gttcgtggga tgcccttcaa ttggcccgat
     8221 cgcccgattc catgtcacca cttccacggc ttcttatgca tctgcatttg aactccgaag
     8281 taacccacaa aggaggattg cgtggagctg ctggcctgca ggctccgtcc ggccatcata
     8341 aggagccaga gcttgcctac cttgtagcgg gcgccggcat ccacggtggg ctgggcttcc
     8401 acggagtgga atgcgccctg cgaatacact tcggcggcaa tctctagttt gtcacttatt
     8461 tttcggccca ccacaacacc ggccagccat ccattcggcg ctttctgcac aagttggtaa
     8521 ccgccctcgc agtccacact cacggcacca aaatctttgg tgaactgcat cggcaaaagg
     8581 aatgagttcc cttccgcagt aatgccgcgc tcggtggagt tgttcgggtt gttgagcagg
     8641 acctggggga agaatgagag tgaaattccg cgatccccgc cctcgtaaaa gcgccacttg
     8701 atccccaggt tcgattgtcc cagaccgaac ttggccgctg catccggagc ctgtacacgc
     8761 agccaggcat tttcgtacgt cagttgcaca cgcttgccga gtcccagatt gatgtcgaga
     8821 tccggcaagt gtgagacaga ctgatcagta tagagaaagg gcatgtagct gacgttgact
     8881 tcaaggttca ggttgccggg tgtgcctgga tcattggtgt aaaaaggcgg tccgccctgc
     8941 gcaaatgcag agcagttgac cagcgcgaga agcagcagga gaagaatggt cgcgcgaaag
     9001 atccggccac cggctgtggc cctggatacc tggccaggtc tgataccggc ggctgaaagc
     9061 aattgcagca cacaccaacc tcaggtctgg agacgacctc aggcgatttt ggcaagctgc
     9121 cggaattgct gcggtgacgg taatcacgca gatttgcaag gaagaatgga ctgccccctt
     9181 tccgggcagt ggtgagtcgc catgagatgc gcaacgggat cagccgccgc ttctcttcgc
     9241 caccatgcct gcaacgtagc ttttcacgtt cgcaggcaag cgcattgatc gcaacgcatc
     9301 tttcagttgc aggagcggca gttcagcggc aatcttaacc acggcggcaa aaggcgtgta
     9361 cctgttcgcg agcaacgcag cgcgcacgtc gttgcggaac gaccattttg gatgcttcgc
     9421 aaccagcggc gccagcagtt ccgtgccggc ctcagccttc agagccttca ccacgtgggc
     9481 ctcaatcatc tgcgggttga gcagcgcggc ggtgagaatg cgttcttctt tatcgtggag
     9541 cagggcggcg gccactcgtc ctgagctgcg cttggccagc gtgaagcgtt ccccggaaga
     9601 gactgtcgcc agccgcgcga taatgccttc ttccgccgcg cgcttcacgt caggagccac
     9661 ggcaggcgtc agcgcgatct gcatcagctc gaagggataa agctgccgga tcgccggcac
     9721 cgaaacatgt cgcggtgtgt gtgaatgcgt gacaagcgca atccggacct tgcggatctt
     9781 tgccaccagc gaatgccgcg ccagctcttc cagcgcttgc ggcggaagat cgcggcgttc
     9841 aagaaatgcg agcgcaaggt cttcggtgag ccgcgcatcg gcggccaccg caataagaat
     9901 ctcaggcgaa gaatcgtgga tcagctcttc cagcttcgcg tcttgcggca ggagcagttt
     9961 tttgcgcgat gctgtgctga cttcaggcat gagcagattt gggctgaact accggcgtcc
    10021 gcgatgcgcc gcgatctcaa gcgcgcccat caccgggcgt acaaaggcaa agctcacggc
    10081 ggcctcggga tgtttctcct tcacggcgtt gcggaaagct tgccgcacaa tggtggagtt
    10141 ctgcaagact cctccggcca gcgccactgg tacaacgccc ccgcttggcc acagccgctc
    10201 tataaccgcg ctcgccaggc cggcaagggc aacgccggcg cgctcggtga tttccctggc
    10261 cgtgggatcg cccttctctg cttcgctgga aactgctccg gccagttcag ggaatcgcgg
    10321 ctcagccgag ttggcccgtc gcaccacttc ctccggtgcc acgttccaca tctccgcaat
    10381 cacggccagc aatccattct ttacgccgtg atcataggaa cgcagtgccg cagccaccgc
    10441 ctccctgccc acccagaagg ccgagccttc gtcggaaatg gaaggacccc agccgccggc
    10501 gcgtgcagtc tcgccggcct ggttgcggcc gaacgcaatg gatccagtgc cggaaatcac
    10561 cagcacgcca tgtgacgtgc caaacgcggc gcgatgcgca atcaggtggt cgccggcaac
    10621 gtagatggtg gcctgcggaa tgatctcgcg gaccgtttcc tgcgcccagc tcacgctctc
    10681 cggcagcgag gctcctgaca ttccgatgca cacatgctgc acgtcgcgca ccagcacgcg
    10741 cgccgcctcg gccgcgtgtt ccattacgcg ctgcagattt tcgcggccct tctccttgcc
    10801 cacataggca agcttgcacg tggggccaac cgcctggccc agaagttctg cgccgttgct
    10861 cacagcgcac tccgtttttg tgccgccggc atcaacgccg aggtacagtg ccatacaaag
    10921 aaggtggagc ccgtctcccg caaaaagagt tttggttttg ccgaacttat cctcaataat
    10981 actcgcagcc ccaaacgcca acttgcgtct gaccacattc ggaaggattt ttttcacggc
    11041 aacccggctc gccctgcatg cgactccact ctgttgacat catcatcatc gtcgcttacc
    11101 tgatcgggat tacgtttttc gggctgcgct tccgcaagtc gcagcgctcc atgcgcgact
    11161 acttcctggc cgaccgcacc atcccatggt gggccatcgc gctctccatc gttgcggcgg
    11221 aaacaagtac gcttactgtc atcggaacgc cgggcatcgc ctacgcaggc aacttcggct
    11281 tcctgcaggt ggtctttgga tatctgctgg gccggatcgt gatctgcctc atcttcattc
    11341 cacagtactt tcgtggcgag atgttcaccg cctatcagtt gattgatcgc cgcttcggac
    11401 cggccctgca taaaatcacc gcagcagttt ttctgattac ccgcgccgct gcggaaggcg
    11461 tgcgcgtgtg ggctgtagcg attgttgtgg ggattgcgct tgggacaggc gaaatcgcgt
    11521 ccgtggccat agttctgctg ctcaccctta tctacacatt cgaaggcggc ctggccgcgg
    11581 tgatctggac ggatgtggta cagctcatta tttatgtggc cggcacaatc gtcggcttct
    11641 tcacgctcct gcatcttgtc ccgggatcat ggccggcgat tcacgcatca gcggcggctg
    11701 ccggcaaatt gcaggtgctg gacttcacct tcagcctcag caagaccttc acgttctggg
    11761 ccgggctgat cggcggcacg ttccttacca ccgctacgca cgggaccgat cagcttctgg
    11821 tgcagcgact cctcgccgcc cgcggccgcc gtgaagctca gggcgctctg ctcaccagcg
    11881 gcgtggtggt gctggtgcag ttcactctgt ttcttctgat gggagccgcg ctctgggtgt
    11941 tctacgggat gaacccgccg acccaatcgt ttacgaagac agattacatt ttccccagtt
    12001 tcattgtgga ccacatgccg cacgggatca gcgggctgct gattgccgcg attctcgccg
    12061 ccgccatgtc caacctgagc gcggcgctca actcgctttc ttccaccagc atggttgact
    12121 tctacctgcg ccgccgaccg gccaccacgg agcgtacccg gctgcagctc tcgcgcgttg
    12181 cgacgatcat ctggggcatc gtgctcttcg gactggcact cgcttcgcgc tatggcggca
    12241 gcgtgctgga aaaggggttg agcatcgcat ccgtagctta cggtgggctg ctcggcgtat
    12301 ttcttctggg cttgctcacg cgccgggcaa ctcaatctgg agctatcgcc ggtatgcttt
    12361 gcggtctcgc actgaatatc tacatctggt ttcaaggtca tatcgcctgg acctggtacg
    12421 tcaccatcgg ctcctgcgcg acttttatca tcggctacgt cgccagcctg ttcacggctc
    12481 ccgcgcgcca gcctgaaacc gccgcggcga gtgacagcta gggcacacac cggatatgcg
    12541 ctaaggtctg acaaatgcca gactatcgct cgacaattca ttcatcccac ggtcccatga
    12601 gacatctctt tatcgcttct ctcgcagtca tcttgagttt cacaggagcc aacgcaaaag
    12661 aaccggccgc cacccggccg tcaacgcaga tgattgtggt caccactgct gactggagcg
    12721 cgccgcaggg aaccctgcgc cgctatgaac gcggaggccc tggccagagt tggcatgctg
    12781 tcggagaacc aatcaccgtc atggtcggaa aaaacggact gggctggggc gctgacttaa
    12841 tgaaggttgc ggcgccaatt cgtgacgcgt ctgatccagc gaaaaaagaa ggcgacggca
    12901 aggctcccgc aggagcattc caccttgcca aggctttcgg ttacgcgccg cagccccaac
    12961 ccggatggaa gatgccttac gttaacctga gctcttccgt cgaatgtgtg gatgacacag
    13021 cttcaaagtt ctacaaccag gtggtcgacc gcagtactgt cacagccgat tggaacagct
    13081 cagagcacat gctgcgcgat gatgaactct accgctgggg cctgatcgtg gactacaact
    13141 cggggcctgc tgtgcccggg agcggctcct gcatcttcat gcacatctgg cgcgggccgg
    13201 gccagccgac ggtcggctgc acggcaatgc cgcaggccag catcgaaggc ctgctgagct
    13261 ggctcggtcc cgcgagcaag ccactgctgg tccagctacc cgaagccaag tacgagatgc
    13321 tgcgcaagca ctggaacctg ccgcagattg ctgaccgcgc tgcttccaaa ggctctacaa
    13381 tgcacagcgg agcaaatcct gttggcaaat aataaagagg tgttgatggc cacacccgct
    13441 gccgttgagc agcaccgccc ggaacttgtc cgcgagttga acgcctggca cgctacctcc
    13501 atcgttgccg ggacgattat cggcagcggc atattccttg ttccggcaga gatgatgcag
    13561 gcggttggca ccgcgaagct cgtctatctc gcatggctgg tcggcggcgc gctttcgttc
    13621 ttcggagcac tcacctatgc cgaactcggc gcaatgcgcc cattcgcagg tggcgaatac
    13681 gtgtacatcc gtgacgccta cggcccgcta cccggttttc tgtacgcctg gtcgtggttt
    13741 ctcattgcca agccggcttc tattgccagc atcactgcgg ggttggtgcg gattctgagt
    13801 agcttctccg catttggttt cctgccgcat cgtatttttt ctatcggcag ctacggcgtg
    13861 acctggggac agctggttgc catcgccgct accatcctga tctctgtgat caattatctt
    13921 ggcgtgcgca aggcgggaaa tttccaactt gtctttacgg cgctcaaggt tgtcatgatc
    13981 gtggtgatca ttgccgcggc gtttaccgca acttcgggaa cctggagcaa cttcggcacc
    14041 gcattcaccg gggccaaggg cggcatggcc ggattcatgc tggcgctagt ggctgcgctc
    14101 tgggcttatg acggctggaa tgatctcaat atggtgagtg gagaaatcca ccacccggaa
    14161 cgcaacatcc cgattgcgtt gatcgcgggg gtcgccctcg tcgccgtgct ttacatcggc
    14221 gtcaacggcg cggtgcagta cgtgatgccg gctaccgctg tcgcgggcgc gcctgtgccg
    14281 gcggccgcag ccacgcagat tgcccttggc cgcgtcggtg cgctcattgt ttccgccggg
    14341 atggctctaa gcctcctcgt gacgttgaac ggcaccatca tgagcggcgg cagaattcca
    14401 tttgccatcg cccgcgacgg ctacttcttc aaggcgctgg cggaagtcca tccccgcttc
    14461 cacacaccat cgctcgccat tgtggtgcag gctgtgatgt cgattctgct gttgctcggt
    14521 ggcggaggct tcaaggactt tatcgaactg gccatctttg ccgagtggct cttctacatg
    14581 attgcggcga gtactatttt cgtctttcgt cgccgtgagc cggaacgcga tcgcgcttac
    14641 cgcacctggg gatatcccgt ggtgccggcg ctctttgtgg tagccgctgc agtcctgctc
    14701 tattacacct tcatggacaa gctgcacacc tccgccgtgg gaaccatcat catgacgctg
    14761 gtgatctttg ccggcgtacc ggtgttttat tacttttcgc gccgcagaga caactcgatc
    14821 gcctcttcat aagccatgag cacgcacgct gcacccgaac gctccgtctt gaaggaaggt
    14881 gcggctgcgt gcgccggctg cggaacgccg ctgaccggcc cgtactgctc gcagtgcggc
    14941 gagcgcgttc tggaccatca ccagctttcg gtctggcact ttatccagca caacattatc
    15001 cacgagttca gccacgtgga tggaaagatc gcacgcacgc tgcgttatct tttcttccgg
    15061 cccggctttc tcacggaaga gtatttcgcc ggaagacggc ttgcttacgt caatccggtc
    15121 cgcctgctgc ttacggccgt gattgctttc gctttgctgg ttcacggcag cggttttgcg
    15181 gtaatgacaa ttggcaaatt gcgcctcagc atgctgcctc ccggaatccc tgaaacgctc
    15241 agcattcacg atacagtcag ccagttggat ctgtttggcg tgctgtctgg ccggctggcc
    15301 aatgtgcggc agcataacga tatcgagaaa gaagttgtaa tcgcgaagtt ccagcatgaa
    15361 ctccgcaact attccaccgc actctcattc ggcaacgtcg ttctgcttgc cggcctcctg
    15421 ttcctgctct tccatcgcag gcggcgatac ttcctggagc atctggttta cgcccttcac
    15481 gtggcctgct tcgtcctgtt cttcagcatc attcccctta acatctttcg gctcctcttc
    15541 atcttgagcc atgggaatct cgcgaaaggc acggctctgg cagtaatggt ggtcaccatg
    15601 ttcctggaaa ttgtgtatct tcaccgcagc atgttgcggt tctacttcgc agacgatgtg
    15661 aggaacagga gaggatgggg tggtgcggcg tgggctaccc gcggcgcggc cttgctggta
    15721 ttcgtcggaa attcagcggc attgacgctg gtctattttg tgggagcagc gatcgcgctg
    15781 gcccggatct gagctggggt ttcgatgcag aaaaaacggc cactaaaatt gacgaagaag
    15841 aagagttccc gagcgtcggt gaagaaagcg ccggagcgct cgctgtcaga ggacgaaata
    15901 aatcggattg ccgtgaaggc gcacgaacgc tttttttaag agcagaatcc agatccgcga
    15961 tgtatacggt tcgctggata agtaagacgc atacggctct tacgcccggc tgaactccag
    16021 caccttctcc tgtcccggcg ccttcggcgg acacagccgc tcgtaaatct tcacgtactc
    16081 gcgggctgat gctgtccagg aaaagtcttt cgccatgccg ttcagcatca gcttgttcca
    16141 gtttggcttg tcgcggaaag cgttgatcgc atcatggatg gtgttgagca gttgcgcggc
    16201 ggaataagga acaaatttga atcctgtccc cttcccggtg gccgcatccc acggctcaat
    16261 gctgtcgtca aggccgccgg tggcgcgcac aatgggcacc gtcccgtact tcaggctgta
    16321 catctggttc aggccgctgg gctcgtagcg agaaggcatc aggaacatgt ctgcgcccgc
    16381 ttcaatcttg tgggcgacag tgttgtcata cgccaccttc accgcaaact tctccgggta
    16441 aagccggttc agcttgatga acaggtcctg atactccttg tcgccgctgc ccaggatggt
    16501 gaagatcacg ggcagttgcg ccatgtcgtc cgctacttca gcgatcaggt caaaaccctt
    16561 ctgcgccgcg aagcgcgaga cgattccgat caccggcaga ctggcgtcgg cgctttccag
    16621 gccaaattgc cgcagcaaat cgtatttgca ctcgcgcttg ccttcgagct tctccggcga
    16681 atactgccgc acgatcagct tgtccttttc cgggctccac tcgttgtagt ccacgccgtt
    16741 caggatgcca gtcactgtgc cggcgcggtc gcgcagcact ccgtcaagcc caaagccaaa
    16801 ctccgccgtc tggatctcct ggctgtactt gcggctcact gtggtgatgt agtcggaaaa
    16861 gccgagagcg cctttcagga aattcacctt gccccaatac tccatcttgt ccatggtgaa
    16921 caggtcccac ggcagcatga gcagcggcag gatgtccggc gggaacagcc cctggtagcc
    16981 catgttgtga atagtgaaca ccgttgcggt gttgtgaaac actggatcgt ccagatagct
    17041 ggtgcgcagg agcaccggga tcagcgccga ctgccagtca tggcaatgga agatgtccgg
    17101 cacccccagg atcttggtgg cttccagcac cgcgcgcgag aatagtgcga aacgctccgc
    17161 gttgtccggg taatcgcctg cgggagtgcc gtacagcgcg tcgcgatcaa agaattgcgg
    17221 gtactcgata aagtagaatt gcacgccggc gttttttccg ccgtccagca cggaacagaa
    17281 gcggtattga tcgtcaaacg gtatggtgat gctgcgcagt gccgtcttgg cattggccag
    17341 ccgggtctgc cggtagcgcg gaacatagac ggaaacgttg tgccccagcg aagcaagcgc
    17401 ctgaggcaga gcgcctacaa catcggcaag gccgcctgtt ttggaatacg gcacgcactc
    17461 tgaggcggcg aagacaatgt tcatagggcc cctccaggga agatgcttga gtcatgctgc
    17521 agagatgccg caaaccggcg gaatatctgc ctgaaaccgg acgggctgcg cagtagcgcc
    17581 gccttttcga agtctaaata gtcagggaac gaagggtcaa tttgcgaacc gctcaaaaac
    17641 caaagctggg gcagaatttc ctggccgacc gcagcgccgc tgccaaaatc gtggacgcgc
    17701 tgggcgatat ctcccactcc cttgtcgtcg aaattggccc gggcaagggc gctctgactg
    17761 acacgctggc gcagcgcgca ggcaggctca tcgctatcga acttgaccgc cttctcgcca
    17821 ccgagctgcg cttcaagtac tcacgctttc ccaacgtgga ggtgctcgaa ggagacgttc
    17881 tcaagattga cttccgcacg gtgctccgcc gcagcgccgg acctctgacg gatctgcgac
    17941 cggtaaagcc tgaacctgct cgcgtggtcg gcaacctgcc ttactacatc acttctgaca
    18001 ttctgttgcg ccttttcgaa tatcacgatc tgctcgcaac catcgtcatc atggtgcagc
    18061 gcgaggtggc cgatcgcatt gctgccaggc ccggctcacg cgattacgga ctgctctccg
    18121 ccaccgctca gctttactgc cgcgtggata atctcttcac ccttcctccc ggggcatttg
    18181 cgccgccgcc caaagttcac tcgagcgtac tgcggctcac cgtggcgccg cgcttcagcg
    18241 aactccaggt ggagccggcg cccttcattc agtttctaaa actggccttc gccatgaaac
    18301 gcaagacttt ggtcaacaat ttgaaatcgg cctacgctga cgcggcaatc aagtccgcgc
    18361 tgaaagcggc cggcttgcgc gcagacgtgc gtgctgaagc ggtagagctg ggacagatgg
    18421 cagaggtttt cagagctttg atgggccagc aattaactca atgacgagca tagagtcagg
    18481 gccgagttac aacatctcta cgcaggggac gtggcatgcc gcgtctgact ctcttctgag
    18541 aagagaatgc ctcaccgaca ctttatggct tcctcaaaaa taaaaaggcg agcttttaag
    18601 cccgcctttc agtgacaaaa acaactttac ttgtgcaccg gcgcactcac atgcggagcc
    18661 gcggaaatat gcggcgcggg cgcgctatgc gggaccgagg gcgccggagg agctacatgc
    18721 ggcgcgggct cggaatgggg cacgctggcc ggtggcggcg ctataggacg tgcgggctca
    18781 cgctcgacat gcggcaacgg gtgtggctgt tctctctcca cgcgaggcgc aggcgccgat
    18841 tcatggtggg ccggctctcc tgcaggagct gcgggctcct gaatcgaggt tgcgggtggt
    18901 ggcgcttggt gtctggtctc aatcgccggc cttgtgccca tcccttcacc cggatgtccc
    18961 ggcatcctca ctgagggctc gtcttgatca attcgcacgc ggcccggctg gcttggcctt
    19021 ccaccaacaa tgctgatgcc cggctgtctg cccggagcaa ttccggtgcc ggctcgcagc
    19081 ggtggtggcg caggagcctg gaatccgtgc ggaggattca caaatcttgg agcacgcgcc
    19141 cagccgctcc atgcgcccgg ctgccagaac cagccacgtc cgttgatgaa aacccagtgg
    19201 ccgtaccgat acggcatcca tccccaggga tatgccgata cccagcaata cccgaagcca
    19261 ggagaataat tccagtagcc gttcatgaac gggtcccagc cgggataaat tccgtaaggc
    19321 tgccagaggt taccgtaacc cgcgatgtca tagaactgcc cgtaataacc gagatcgcct
    19381 acgccatact gatagggaga ctgtgtgtaa ttctgcgccg aggcgtagct gctcagatcg
    19441 tggtcccgct gatcgctcca gcgatcgagc tcatctgcgc tggcttcttt ctccaggtca
    19501 tatctacccg aatccaagac atcgagcgtg aaggtttcgt tcttcttgac tgcaatgtct
    19561 ttgccgtaac ctgtgtccct gacggcgact tcgcccttga ataccgccac ttccagcggg
    19621 tcagagt
//
LOCUS       DASQYP010000405         5092 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_168713, whole genome shotgun sequence.
ACCESSION   DASQYP010000405 DASQYP010000000
VERSION     DASQYP010000405.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 5092)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5092)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5092
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_168713"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(3..626)
                     /locus_tag="VE783_13180"
     CDS             complement(3..626)
                     /locus_tag="VE783_13180"
                     /inference="COORDINATES: protein motif:HMM:NF033644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UpxY family transcription antiterminator"
                     /protein_id="HYX54403.1"
                     /translation="MDQRISHSLNDAFVASDEFFAARWYALFVRCNQEKRVCCSLQER
                     SVEHFLPCYSSLRHWKDRRVLLEMPLFPGYVFIRLPLVERLKALTVPNVVSLVGPKDC
                     PSVISEQEIAWIRGGVAHGNAEPHEYLRAGQRVMIAGGPLSDMEGILLRRSNGARVVI
                     SLISIARSFAVEVDASSVKVLDGDSRLPVPSTSSQSGRFRELCAGLI"
     gene            complement(719..1024)
                     /locus_tag="VE783_13185"
     CDS             complement(719..1024)
                     /locus_tag="VE783_13185"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX54404.1"
                     /translation="MRRSRVEEEPETARQVLSYFVRNPQATDTLEGIARWRLLEEQLQ
                     RSLRQTDAAIKWLVEEGYLQAIQPVTSVRLYRLDPQRQEDAVQFLAHGRGRRTGRTH"
     gene            complement(1247..2644)
                     /locus_tag="VE783_13190"
     CDS             complement(1247..2644)
                     /locus_tag="VE783_13190"
                     /inference="COORDINATES: protein motif:HMM:NF012385.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54 dependent transcriptional regulator"
                     /protein_id="HYX54405.1"
                     /translation="MLPNALVINTQALAPDPVITCSLSGAVLCEWQNWEKLGLEDLRR
                     AALDLIIINAPAWTEKAESLFRFLSEAPLSAPVLALLPQECSREILDLASRVSADFLF
                     HPVREDELRLRASRLLDTSSSEVHEAQAELRDKLGLTQLIGNHPEFLQAVQQALLFRK
                     SDAPVLITGETGTGKELFAHAIHSLSRRCDGPFIPLDCGVLPEQLAENELFGHRRGAY
                     TDAHSDQKGLAALAERGTLFLDEIDSLSPANQSKFLRLLQEGSYRALGSDRIMQSNIR
                     IIAATNRPIEEAVRDRQFRNDLYFRLNVLRLNLPPLRRRAGDISLLARHFLNGQLPGK
                     EGPVSFSAAALQKLESYHWPGNVRELLNTVQRAIVCCSGPQILPIHIVLETAAEPERA
                     AAAGETFHFAKQMAIEKFERAYVEELMARFQGSVTRAAREAGKERRAFGRLIKKYGIS
                     RNASGAQGSGRPGHL"
     gene            3282..4940
                     /locus_tag="VE783_13195"
     CDS             3282..4940
                     /locus_tag="VE783_13195"
                     /inference="COORDINATES: protein motif:HMM:NF025021.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ankyrin repeat domain-containing protein"
                     /protein_id="HYX54406.1"
                     /translation="MTASKSLPPRPSLDSLHKQAKKLTRDIAAGDAAAIARARAHLPN
                     VLLPLTQRNAQLVIAREYGYAGWQDMTAEVRKRLDHGMEWAAEQAERIIHGNDVEGLK
                     QLLSDCPALLSWRGHRDAAREGLLGFATRAYGDCFEPFREERFTRAACAELLIDSGAV
                     VISTVFDGILKSRARGLLQLFRRKGLLPQTIKFLTAVGDVDAVRVALDESGSDLNSVT
                     EAFTISCNFEYEGMASLVLDRAIALDPELRHRIEGGLGRLAFTSYFIKNRPKHATEVG
                     LWRAFVMDQVSRAVYSWRGGETSFKERRGSSDLPGFLSLLHREPWLLGEAFVKFQTEV
                     IERAALVGCAEFISALFDLNPAMLRHQPPPKSQAVEFAFTYANTHVIPVLTRIWPLPD
                     DLPHAAGMGYLARVKQWFHPSGTPALGEVENHYPCSPYMPDDRIEEYSRQWGPPSQQR
                     VLDVALAWAVINSHLDVADFLLQRGANINTTWSSHEPASILHELVWHRNYQAMQFLID
                     HGIDMTIKDHRWNSTAKGWAGYAAEDGKLARWLEEAERQRRPRA"
BASE COUNT         1082 a         1494 c         1478 g         1038 t
ORIGIN      
        1 ggtcagatga ggcctgcaca cagctcgcgg aaacgtccgg attggctcga cgtagacgga
       61 actggcaggc gggagtcgcc gtccaggacc ttgacgctcg atgcatcaac ttcaaccgca
      121 aacgagcggg cgatcgaaat caaagagatc accacacgcg cgccgttgct cctgcgcagc
      181 aggatgcctt ccatgtccga aagaggccca cctgcgatca tcacgcgctg gcctgctctc
      241 agatattcat gaggctccgc gttgccatgg gcgacgccgc cgcggatcca ggcgatctcc
      301 tgttcggaaa tcactgatgg gcaatccttg ggtcctacca gcgaaaccac attgggaacc
      361 gtcagagcct tgagccgctc taccaggggc aggcggatga agacgtatcc ggggaagagc
      421 ggcatctcca gtaggacacg ccggtccttc caatggcgca gcgaggaata gcagggcaga
      481 aaatgctcga cgctacgctc ctgcaggcta caacagaccc gtttctcctg gttgcatctc
      541 acaaacaggg cgtaccagcg cgctgcgaag aactcgtcgc tggcaacaaa agcatcattt
      601 agagagtgcg atattcgctg gtccatgaga ttaggtacgt agcttcgccc cgtcacttac
      661 aggcctttgt gaccaaagcc aaaaaatctt ctgcttgcgc gcccggctcg cgataaagct
      721 aatgcgttct accggtccgg cgacctctgc catgggcaag aaactgcact gcatcttcct
      781 gccgctgagg atccagccgg tacaatcgca ccgaggttac gggctggatc gcctgcaggt
      841 agccctcttc cacgagccat ttgattgctg catcggtctg ccgcaggctg cgctggagtt
      901 gctcctccag caggcgccag cgcgcaattc cctcaagagt gtctgtcgcc tgaggattgc
      961 gcacgaaata gctcagcacc tgccttgctg tttccggttc ttcttccaca cgtgatcgcc
     1021 gcaagggaag acctcgagcg ggtcaatgca actttcattc catcccggcg gaacaatgga
     1081 tcctcatgca ccgcttggcc cgcgatcaaa atttttcggc aagtgccgga cctggctggg
     1141 tcgcgtgcgc cctgttcgat tgtgacaagc ccgcgccgga aaagggtcga agccgcttat
     1201 ctgctgggtt tttgggggag cgggctgaaa acagcccgct cccgggtcat aaatgacccg
     1261 gccttccact cccttgcgca cctgaagcgt tccggctgat gccatacttc ttgattaacc
     1321 ggccgaacgc ccggcgctcc ttgcctgcct cgcgcgcggc ccgcgtgacg ctgccctgaa
     1381 agcgcgccat cagctcttcc acataggcgc gctcaaactt ttcgatcgcc atctgcttgg
     1441 cgaaatgaaa ggtttcgccg gccgcagccg cacgctcggg ctccgccgct gtttcgagca
     1501 cgatgtgaat gggcaagatc tggggaccgg agcaacacac aatcgcgcgc tgcaccgtat
     1561 tgagaagctc acgcacgtta cccggccagt gatagctttc gagcttctgc agcgcagccg
     1621 cggagaatga gactggtcct tccttcccgg gcaactgccc gttgagaaaa tgccgcgcca
     1681 agagcgaaat atcgcctgcc cgcctccgca atggcggaag attgaggcgg agcacgttca
     1741 gccggaaata cagatcattg cggaattgac ggtcccgcac cgcttcttca atgggccggt
     1801 tggtggcggc gatgatccgg atattggatt gcattatcct gtccgaaccc agcgcgcggt
     1861 agctcccttc ctgcaacaag cgcaggaatt tggattggtt ggcgggagaa agagagtcga
     1921 tttcatccag aaagagtgtg ccgcgctcgg ccagcgcggc caggcccttc tggtcagagt
     1981 gcgcgtcagt gtaagcgccg cggcggtgcc caaacagttc gttttctgca agctgctccg
     2041 gcaggacgcc gcagtcgagc gggataaagg gaccatcgca gcgccggctc aaggagtgga
     2101 tcgcgtgcgc aaagagctcc ttgcctgtac cggtctcacc ggtgatgagg accggcgcgt
     2161 cgctcttgcg gaacaagagt gcctgttgca cggcttgcag gaattccgga tggttgccga
     2221 tgagctgtgt gagcccaagt ttgtcccgca actcagcctg tgcttcatgc acttctgacg
     2281 aacttgtgtc caagagacgt gaggcgcgta accgcagctc atcttctcgc accggatgga
     2341 acaggaaatc agccgatacc ctggaagcca ggtccagaat ttccctggaa cattcctgcg
     2401 gtaggagggc gagcacaggc gcagaaagcg gagcctcgga caggaagcgg aacaaggatt
     2461 ctgctttctc ggtccacgcg ggggcattga tgatgattag gtccagggca gcgcgtcgca
     2521 gatcttccaa gccaagcttt tcccagtttt gccattcgca cagtacagcg ccgctaaggc
     2581 tgcacgtgat cacaggatcc ggcgccaaag cctgggtgtt gatgacgaga gcattaggca
     2641 gcacttgtta gcccccttca gttggcgcgc atctgccaaa gcgcatgaca agtttgcatg
     2701 aagtcgtgcg tgcgcacagg cacttctgct tggagttcag aaaaatattc tacgttcagc
     2761 tgagttgtag tgaattttct tttcaagcca ttacaaaata tttttttaat cgcaaagccg
     2821 agaatgagaa aaatttaatg gtgtaacgtt aacgatccaa aaaggccaaa ctatgggagc
     2881 gcttcaacca cctgaggccc cttgttggct aagctaattt gggcatgtac gacgaatcta
     2941 tccccgcgct cctccccttg tattaaatgt agccaaacac atttccagaa cagttgcgaa
     3001 ctcgtgcatc cgaaacactc ccagaggttt ttcagtcaca cgttgcgcgg tacttatgct
     3061 ctctgatctg cactgcaaac ctgcgagctt tcgggcggag aagaaccacg tttgacattg
     3121 aaccggcatc cgcctgatac tgctcgcagc gcgctcgcag ggcgccaccc acccgcggca
     3181 agggaaacac tcccacctgt tttggactga attgtgtgcg tacgcacctt ctttcagcct
     3241 gaattcagcg ggcatcaggc ggcttatgaa aggaggtcgt aatgaccgct tccaaatctc
     3301 tccctcctcg tccgtctctt gactccctgc ataaacaggc aaagaagctt acgcgcgaca
     3361 tcgccgccgg ggacgcggct gcaattgcgc gtgcccgggc gcatctgccg aatgtccttc
     3421 tgcctttgac gcagcgtaac gcgcaactcg tgattgcgcg cgagtacggc tacgccggct
     3481 ggcaggacat gacagccgaa gtcagaaaac gcctcgacca cggaatggaa tgggcggcag
     3541 agcaagctga acgcatcatt cacggcaatg acgtggaagg attgaagcaa ctattgagcg
     3601 actgcccagc tttgctttcc tggcgcggcc accgggatgc agcgcgtgaa ggtctgctgg
     3661 gatttgcgac cagggcgtac ggagactgct tcgagccctt tagagaagag cgtttcaccc
     3721 gggcagcctg cgccgaactg ctgatcgact caggcgccgt cgtgatctcc acggtcttcg
     3781 atgggattct caagtcgcgc gccaggggac tgttgcagct ctttcggcgg aagggcctgc
     3841 ttccgcagac gatcaagttt ctcactgcgg tcggcgatgt cgacgccgtc cgcgtggcgc
     3901 tggatgaaag cggaagcgat ctaaactcag taacggaagc gttcacgatt tcctgcaact
     3961 tcgaatacga aggcatggcg tcactcgtgc tggaccgggc tatcgcgctc gatcccgaac
     4021 tccgccacag aatcgaggga ggcttgggac ggctggcctt caccagctat ttcatcaaaa
     4081 accgtcccaa acatgcgacc gaggtcgggc tatggcgagc gtttgtgatg gatcaggtca
     4141 gccgcgctgt ttattcctgg agaggcggtg agacctcatt taaggagcga cgcggaagca
     4201 gcgacttgcc aggcttcctt agcctcttac accgtgagcc gtggctgctc ggtgaagcct
     4261 tcgtaaaatt ccaaactgaa gtcatcgaaa gggcagcgct ggttgggtgt gcggaattca
     4321 tcagtgcgct gtttgacctg aatcccgcga tgctgcggca tcagccgccg ccaaaatcgc
     4381 aggcggtcga gttcgcgttc acctacgcga acacgcacgt gattccggta cttacccgca
     4441 tttggccgct gccggacgat ctgccgcatg ccgcaggaat gggctacctt gcgcgggtga
     4501 agcagtggtt ccacccgtcc ggcacgcctg cgctgggtga agtcgaaaat cactatccct
     4561 gcagtcccta catgccagat gatcgcatcg aggaatactc acgccagtgg gggccgccga
     4621 gccagcagcg tgtgctcgac gtggcgctcg cctgggcggt catcaacagc cacctcgacg
     4681 tggctgactt cctgcttcaa cgcggcgcga acattaacac cacctggagt tcgcatgagc
     4741 cggccagcat cctgcatgag ctcgtatggc accggaatta ccaggccatg cagttcctta
     4801 tcgaccacgg catagacatg accatcaagg accatcgctg gaatagcaca gcaaagggat
     4861 gggccgggta cgccgctgag gatggaaagt tggcgcgttg gctggaggaa gcggaacggc
     4921 agcggagacc gagagcatga gccctcaaag gcggtgtcac tcgctcctgc tggtacttct
     4981 gccagtgttc tggtgccccg cctttctcta acgtgggaac tgtagtgcca cgtctgcagc
     5041 acgctgctgc agtgaagggc tgaagtgacc ggcgatggaa gatttgtttg ca
//
LOCUS       DASQYP010000406         2271 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_101077, whole genome shotgun sequence.
ACCESSION   DASQYP010000406 DASQYP010000000
VERSION     DASQYP010000406.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 2271)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2271)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2271
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_101077"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1233
                     /locus_tag="VE783_13200"
     CDS             <1..1233
                     /locus_tag="VE783_13200"
                     /inference="COORDINATES: protein motif:HMM:NF016289.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M28 family peptidase"
                     /protein_id="HYX54407.1"
                     /translation="LVNGKLGAGEEDLLTRFGSVSGPVDVGILLVHMRNAAADKLLPL
                     GKTLAGLQEQIDKNSQPASFAFPGDAKVGLQVGVEHTRAQVNNVLAYLPGETDEYVIL
                     GAHYDHLGRGNFDSLAPSQIGQIHYGADDNASGTAGTLELARHFAGLHTKLRRGILFA
                     NFAGEELGLLGSAEWVQHPTRRVEKAVAMLNMDMIGRIKDDKIYIGGVGTGSSFADLL
                     KGTQTKAHLNVEYSLGGYSSSDHTSFLPKHIPVLFFFSGLHSDYHKPSDTWEKINAEA
                     AVRLLGLVADVSEQLAYAPSRPEFKVVAEEQPPAGHEGGVPSGGGGYGPYFGSIPDFG
                     QVESGVKFSDVKPNSPAAKAGLKGGDILVQFGDKEIKNLYDFTDALRRSKIGDVVEVK
                     VLRDGKPLTVKVTLEQRR"
     gene            1281..>2271
                     /locus_tag="VE783_13205"
     CDS             1281..>2271
                     /locus_tag="VE783_13205"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX54408.1"
                     /translation="MIKLLSTFLLVAASLLTAQQPPAENSGLQFPGEKHLRNIRQLTF
                     GGQNAEAYFSHDDKYLIFQHQGNGVECDQIYTIPVDTPDGKPAVPKLVSTGKGRTTCS
                     YFFPAGDRILFSSTHAVSPECPPKPDYSKGYVWPVYDSYDIYTAKPDGTDLKQLTNTP
                     GYDAEATITRDGKKIAFTSMRNGDLDIYVIDADGSHVKQLTHELGYDGGPFWSYDGKK
                     IAFRAEHPNTAEQIADYKQLLKEGKIRPGNLEIWVMDADGKNKRQVTHNGAANFAPYF
                     TPDGKRIIFASNLADTKSARGFDLYIINVDGTNQERVTFYPDFDSFPMFSSDGK"
BASE COUNT          510 a          626 c          686 g          449 t
ORIGIN      
        1 ctggtaaatg ggaagctggg tgcgggtgag gaagacctgc tcacccgctt tggcagtgtc
       61 agcggcccag tggatgtagg cattctgctg gtgcacatga gaaatgccgc cgcggacaag
      121 cttctgcccc ttggaaagac actggccggg cttcaggagc agattgataa gaattcgcaa
      181 ccggcgtcat tcgcgttccc gggcgatgcg aaggttgggc ttcaggtcgg ggtggagcac
      241 acgcgcgcgc aggtcaacaa tgtgcttgcc tatctgcccg gcgaaaccga tgagtacgtg
      301 atactgggcg ctcattatga ccacctgggc cgcgggaatt tcgattcgct ggcgcccagc
      361 cagatcggcc agatccatta tggcgcggac gacaacgctt ccggaacggc gggtacgttg
      421 gagctggcac ggcatttcgc cgggctgcat accaagctgc ggcgcgggat tctgttcgcc
      481 aactttgccg gggaggagct ggggctgctg gggtcggcgg aatgggtgca gcatcccaca
      541 cgtcgggtcg agaaagccgt ggccatgctc aacatggaca tgatcggccg catcaaggac
      601 gacaaaatct atatcggcgg cgtaggaacg ggcagcagct tcgccgacct gctaaaaggc
      661 acgcagacca aggcgcacct gaacgtggaa tattccctgg gcggctactc ttccagcgat
      721 cacacttcat ttcttcccaa acacattccc gtgctgttct tcttctccgg gctgcactcg
      781 gattatcaca agccctcaga cacgtgggag aagatcaatg ccgaagcggc cgtgcgactg
      841 ctgggactgg ttgccgatgt ctcagagcag cttgcctatg ctccaagcag acctgagttc
      901 aaagtggtgg ctgaggagca gccaccggct ggccacgaag gcggagtgcc gagcggcggt
      961 ggaggctatg ggccatactt cgggtcgatt cccgatttcg gccaggttga aagcggcgtg
     1021 aagttttctg atgtgaagcc gaactcgccc gcggcgaagg cgggattgaa gggaggcgac
     1081 atcctggtgc aattcggcga caaggaaatt aagaacctgt acgacttcac cgatgcgttg
     1141 cgccgcagca agattggcga cgtggtggag gtgaaagttc tgcgcgatgg gaagccactc
     1201 accgtaaagg tgacgctgga gcaacgcagg tagccgctga gccagacgac tctgtggcag
     1261 aatgatagtc acgttttcct atgattaaac ttctgagcac attcctgctt gtggcagcat
     1321 ctctgctcac ggcacagcaa ccgcccgccg aaaattccgg cttgcaattc ccgggtgaga
     1381 agcatctgcg caacatccgc cagctcacct tcggcgggca gaatgccgag gcttacttct
     1441 ctcacgacga caaatacctg atttttcagc atcaagggaa cggcgtggag tgcgatcaga
     1501 tctatacgat tccggttgat acgccggacg gaaagcctgc tgtcccaaag ctggtgagca
     1561 ccggcaaagg gcggacgact tgcagctact tctttcccgc gggcgatcgg atcctgtttt
     1621 cctcgaccca cgctgtgagc ccggagtgtc cgccgaagcc ggattactcg aaaggctacg
     1681 tctggccggt ttatgacagc tatgacattt acacggcaaa gccagatgga accgacctga
     1741 agcaactgac gaacactccc ggctacgacg ccgaggcgac catcactcgc gatggcaaga
     1801 agatcgcctt tacctccatg cggaatggcg acctggatat ttacgtgata gacgccgacg
     1861 gttcgcacgt gaagcagctt acgcacgaac tcgggtacga tggcgggccg ttctggtctt
     1921 atgacggaaa aaagatcgcg tttcgagcgg agcatccgaa caccgctgag cagattgccg
     1981 attacaagca gcttctgaaa gagggaaaga tccgtcccgg caacctggaa atctgggtga
     2041 tggatgccga tggcaaaaac aagcgccagg tcacgcacaa cggcgctgcc aattttgcgc
     2101 cgtacttcac gccggacggc aagcgcatca tctttgcctc aaacctggcg gacacaaaga
     2161 gcgcgcgcgg ctttgatctc tacatcatca acgtggatgg caccaaccag gagcgagtta
     2221 cgttttatcc ggattttgat tcgtttccga tgttcagctc tgacggtaaa a
//
LOCUS       DASQYP010000407         6136 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_101313, whole genome shotgun sequence.
ACCESSION   DASQYP010000407 DASQYP010000000
VERSION     DASQYP010000407.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 6136)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6136)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6136
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_101313"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1304)
                     /gene="treZ"
                     /locus_tag="VE783_13210"
     CDS             complement(<1..1304)
                     /gene="treZ"
                     /locus_tag="VE783_13210"
                     /inference="COORDINATES: protein motif:HMM:TIGR02402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016798 - hydrolase activity, acting on
                     glycosyl bonds [Evidence IEA];
                     GO_process: GO:0005992 - trehalose biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="malto-oligosyltrehalose trehalohydrolase"
                     /protein_id="HYX54409.1"
                     /translation="MKTLATSKEQLGACLSEHGCDFRVWAPLAANVTLRLAAKGETRD
                     LPMQRAENGYFVLDTTAAPGDRYFYVVGGGKPVPDPVSRLLPEGVHGRTEIVDPFAFK
                     WTDQNWRGLALKNYVIYELHVGAFTLEGTLDAAIAKLPYLKTLGISVVEVMPVAAFPG
                     KRNWGYDGVSPYAVQESYGGPEALRRFVDAAHAHGLAVMLDVVYNHLGNEGKYLRMFG
                     PYFTEKHKTPWGDAINYDQPGSDEVRNYFVENALYWIREYHIDGLRLDAVQTIKDDSP
                     VHILAEITKSVGELAFEIDKEICVIAETDENDARMLEPRDRGGYGLDAVWSDDFHHAI
                     HAFFTGERNGYYQDFGNAEQIVRALNQGFVFQGEPFNFWEGRPRGTSSAGIPAEAHVI
                     CIQNHDQVGNRANGERLTTLIPRGARMLAAALLLLSPHTPLI"
     gene            1380..1958
                     /locus_tag="VE783_13215"
     CDS             1380..1958
                     /locus_tag="VE783_13215"
                     /EC_number="3.6.1.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR00172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Maf family protein"
                     /protein_id="HYX54410.1"
                     /translation="MKNQLLILASASPRRLELLGQTGVKFEVDPAHIPEERSAEEKPV
                     DYARRLAEEKARAVAVRHPDRFVLGADTIVVAEQHVLEKPADHADAERMLRLLSGREH
                     QVTTAVSLIAPDGETETRTSTTLVRFRKLSDAEIRSYVATNEPMDKAGAYAIQGGAAG
                     FADRMDGEYSNVVGLPLQLVTEMLQRAGLISS"
     gene            complement(1962..2144)
                     /gene="tatA"
                     /locus_tag="VE783_13220"
     CDS             complement(1962..2144)
                     /gene="tatA"
                     /locus_tag="VE783_13220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000492443.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0015628 - protein secretion by the type II
                     secretion system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocase TatA/TatE family
                     subunit"
                     /protein_id="HYX54411.1"
                     /translation="MFGGKLGVPELLIILVIALIFFGPSKLGDLGKGLGDAIKNFKGA
                     MKEHESEPTAQPAEKK"
     gene            complement(2318..3472)
                     /locus_tag="VE783_13225"
     CDS             complement(2318..3472)
                     /locus_tag="VE783_13225"
                     /inference="COORDINATES: protein motif:HMM:NF013696.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M20 family metallopeptidase"
                     /protein_id="HYX54412.1"
                     /translation="MPASSSNAGSLLSFCTAHQPEMLELLRRFVEMESPSDNKTAVDL
                     LGKALAQEFEKIGGRVTFFPQSEYGDHLKAEFPGESGKPVMLLGHFDTVYPLGTLSNM
                     PFHVEAGRAFGPGVYDMKAGIVMMMFALRALRESGRPLKRPVTVLLDTDEEIGSPTGR
                     PVVEDTARQCEAVLVLEPSQGIKGALKTARKGVGDFTIEVAGRAAHAGVDFEKGHSAV
                     IEAARQILEVAKFTDLGRGLTVNPGVVQGGTRTNVIAAETRVEVDVRIARMRDAVEVE
                     KRFAALKAFDPNCQVRVSGGINRPPMEHTEGTVRLFRLAQEQAAALGMEIDEASTGGG
                     SDGNFTSGLDIPTLDGLGGVGEGAHARHEAILLEELPRRTALLACLLRSL"
     gene            complement(3632..4474)
                     /locus_tag="VE783_13230"
     CDS             complement(3632..4474)
                     /locus_tag="VE783_13230"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX54413.1"
                     /translation="MCQPSANSVIYQLPHIEAAATPTSGSISSMKVFIDGKLSFQNSG
                     DTVSLFPGGVPNGTHHLVITATDDFGRSYNASETFSVTGNLPSSCTQSTVGVRLCSPV
                     ASSLVSQNLEIAAGFKGEARITHLRAYVSGKTYLDYSPAAGESQVFITAGPVTAGSHT
                     LKLVAWDALGHAYTASTSFTAYYDGGCSPKGDFCSPAIYTDSPQDGEDVSTSFRISAQ
                     VQNNPAPITAMKAYLSGAQVAVSSGPTLDQTINAPKGTHILTVQAWDSAGKLYRNTLN
                     VNVR"
     gene            4932..5447
                     /gene="fabZ"
                     /locus_tag="VE783_13235"
     CDS             4932..5447
                     /gene="fabZ"
                     /locus_tag="VE783_13235"
                     /EC_number="4.2.1.59"
                     /inference="COORDINATES: protein motif:HMM:TIGR01750.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0019171 -
                     (3R)-hydroxyacyl-[acyl-carrier-protein] dehydratase
                     activity [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyacyl-ACP dehydratase FabZ"
                     /protein_id="HYX54414.1"
                     /translation="MSESTVKTAEPAASAGPLDITQIQAILPHRFPFLLIDRVVEIER
                     MKRIVAIKNVTINEPFFQGHFPGYPIMPGVLMVEAMAQAGGTLLLTEIPDRQNKLMVF
                     TGIERARFRRPVAPGDQLRIEVEVLAWRRIAVRMGGKAYVDGKVACEATISCALVDRS
                     SGRMAESGSGE"
     gene            5444..>6136
                     /gene="lpxA"
                     /locus_tag="VE783_13240"
     CDS             5444..>6136
                     /gene="lpxA"
                     /locus_tag="VE783_13240"
                     /EC_number="2.3.1.129"
                     /inference="COORDINATES: protein motif:HMM:TIGR01852.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008780 -
                     acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine
                     O-acyltransferase activity [Evidence IEA];
                     GO_process: GO:0008610 - lipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-ACP--UDP-N-acetylglucosamine
                     O-acyltransferase"
                     /protein_id="HYX54415.1"
                     /translation="MIHPSAVVDSQARVPASCSIGPFCVVGAGVEMGENCELISHVNI
                     QGPTRIGSNNRFFPFCAIGLEPQDISYKGEPTRLEIGDNNVIRECVTLNRGTEKGGGV
                     TRLGSHTLIMAYSHVGHDSQIGDHAMLVNGSTLAGHVTVEEWAVVGALSPVHQYVRIG
                     AHSYIGGGTVVTQDVLPFSKCVTPRHTKAYGLNSVGLERRGFSKERIRKIHHAFRVLL
                     NSGLNTSQALEKL"
BASE COUNT         1331 a         1775 c         1783 g         1247 t
ORIGIN      
        1 aagatgagcg gcgtgtgggg cgagagcaga agcagcgccg ccgccagcat gcgggcgcca
       61 cgcggtatca gagtggtgag ccgctcgcca ttggcgcggt ttcccacctg atcgtggttc
      121 tgtatgcaga tcacgtgtgc ctctgccggg ataccggcgc tgctggtacc gcgcggcctg
      181 ccttcccaaa agttgaaagg ctcaccctgg aatacaaagc cctggtttaa cgcgcgcacg
      241 atctgctcag cgttcccgaa atcctggtag tagccattgc gctcgccggt gaaaaatgcg
      301 tggatagcgt gatgaaaatc gtcactccag accgcatcca gcccatagcc gccccggtcg
      361 cgcggctcga gcatgcgggc atcgttctcg tcagtttcgg cgatcacgca aatctctttg
      421 tcgatttcaa aggcaagctc gcccacgctt tttgtgattt cagccagaat gtgcaccgga
      481 gaatcgtcct tgatggtctg cacggcatca agacgaagcc cgtcaatgtg gtattcgcga
      541 atccagtaaa gcgcattctc cacgaagtaa tttcggactt cgtcactgcc gggctggtca
      601 taattgatgg cgtcacccca cggagtcttg tgcttctcag tgaaatacgg gccgaacatc
      661 cgcaggtact tgccttcgtt ccccaggtgg ttgtaaacca catccagcat cacagccagc
      721 ccgtgcgcgt gcgcggcatc cacaaaacgg cggagtgcct ccgggccacc gtaactttcc
      781 tgaaccgcgt acggcgaaac gccgtcataa ccccagttgc gtttgcccgg aaatgcagcc
      841 accggcatga cttcaacaac ggagatgcca agcgtcttca aataggggag ctttgcgatt
      901 gcggcatcga gcgtgccctc cagcgtgaag gcgccgacgt gcagttcata aatcacataa
      961 ttcttcagcg caagaccgcg ccagttctgg tcagtccact tgaaggcgaa cggatcaacg
     1021 atctcggttc ttccatgaac gccctcgggc agcaaacgcg aaacgggatc cgggaccggc
     1081 ttgccgccgc ctaccacgta gaaatatctg tcgcctggcg ccgcagtagt atcaagcacg
     1141 aagtagccgt tttcagcgcg ctgcattggc aggtcacgcg tttcaccttt cgccgcaagg
     1201 cgcaacgtca cattggcagc cagtggcgcc caaacccgga agtcgcagcc gtgctcgctg
     1261 agacacgccc caagctgctc tttgctggtt gccagagttt tcacgtatct tgagacggaa
     1321 gtgcgaatgt taaggatgca tcagcggctc aggcccttgc tcccgttaag tccagtcaga
     1381 tgaagaatca actcttaata ttggcttcag cttcaccacg gcggctggaa ctgctgggac
     1441 aaaccggcgt gaagtttgaa gtcgatccgg cacacatccc ggaagagcgc agcgcggaag
     1501 agaagccggt tgattacgcg cgacggcttg cggaagagaa agctcgcgct gtcgctgtcc
     1561 gccatccgga tagattcgtt ctgggcgcgg ataccattgt ggtggcagaa cagcacgtcc
     1621 tggaaaagcc agccgaccac gctgacgcag agcgcatgct gcgcctgctt tcagggcgag
     1681 agcaccaggt caccacggcg gtgtcactca tcgcgccaga tggtgagaca gaaacgcgca
     1741 ccagcacgac gctggtgcgc ttcaggaagc tgagtgatgc agaaatcaga tcttatgtgg
     1801 caacaaacga acccatggac aaagccggag cttacgccat ccaaggcggc gcagccgggt
     1861 tcgcagaccg catggatggg gaatattcca atgtggttgg attgccgttg cagctggtta
     1921 cagagatgtt acaaagagcc ggtttgatca gcagctaaaa gctacttctt ttcggccggc
     1981 tgagcagtcg gttcgctctc gtgctctttc attgcaccct tgaaattctt aatggcatcg
     2041 cccagaccct tgccgagatc gccaagcttg ctggggccaa agaagataag agcgatcacg
     2101 agaatgatga gcagctccgg tacgccaagt tttccgccaa acatgtgttt ttactccatc
     2161 cggaaccgcc aggggcgttc ccgtcagttt tcgtgtgatt taggggttaa ctgatgaggc
     2221 gattgtaggc caattctttg agcagagtca aagaatctgt ggaagataaa gcacttacta
     2281 cggtaattcc ttaactttcc taataaactc tttccgatca aagacttcgc agcaggcagg
     2341 caagcagcgc tgtgcgcctg ggaagttctt ccaggagtat tgcctcatgc cgcgcgtggg
     2401 ccccttctcc tacccctccc aggccgtcca atgtcggtat gtccaggccg gaggtgaagt
     2461 tgccgtctga acccccgcca gtggaagctt cgtcgatttc cattccgagt gcagcggcct
     2521 gctcctgagc cagccggaag agccggacgg tcccctcagt atgctccatg ggtgggcggt
     2581 tgatcccccc actcacacgc acctgacagt tggggtcgaa cgccttgagc gcggcaaacc
     2641 ttttctcgac ctccacggca tctctcatcc gggcgatcct cacgtccact tcgacgcgcg
     2701 tttccgcggc gatcacgttg gttcgtgtgc cgccctgcac cacgcccgga ttcaccgtca
     2761 ggcctcggcc caagtcagtg aactttgcca cctcaagaat ctgtcgtgcc gcctcaatca
     2821 cggcgctgtg ccccttttca aaatcaactc cggcgtgcgc ggcgcgcccg gctacttcaa
     2881 tggtgaagtc gcccacccct ttgcgcgcgg ttttcaatgc gcctttgatc ccctgtgaag
     2941 gctcaagcac gagaaccgct tcacattggc gcgcggtgtc ctccaccaca ggccggccag
     3001 tcgggcttcc aatttcttcg tctgtgtcaa gcagcacggt taccggacgt ttgagcggcc
     3061 ggccgctttc gcgcaaggcg cgtagcgcaa acatcatcat cacgatcccg gctttcatgt
     3121 catagacgcc gggaccgaag gcacggccgg cttcgacgtg gaatggcatg ttcgagaggg
     3181 tgccgagagg gtacaccgta tcaaagtggc cgagcagcat caccggcttg ccgctttccc
     3241 cggggaactc ggctttcaga tgatcgccat attcggattg agggaagaac gtaacccgcc
     3301 caccaatctt ttcaaactcc tgcgccagcg ctttgcccag cagatcgacc gcggtcttgt
     3361 tatcgctggg cgattccatc tcaacaaagc gacggagcag ttccagcatt tccggttgat
     3421 gggccgtgca gaagctgagc aatgaaccag cgttagacga ggaggcaggc atgaaggccc
     3481 atcataaact gctcctgcag cgcgagtaca tggcgggaca aaacacaagc ggcagccccc
     3541 gaaagagctg ccactggtgt tcgacgaagg agcgcgagcg ttatatagaa cgatgcgctg
     3601 gcttggccgg gtgttcgccg gccaaagtga tttagcgcac gttgacgttc aacgtgttgc
     3661 gataaagctt acctgccgag tcccacgcct gaacggtcag gatgtgggtt ccctttggag
     3721 cattgatggt ctggtccaga gttggcccgg atgagaccgc cacctgggca ccgctgagat
     3781 aggccttcat ggctgtgatg ggagcgggat tgttctgtac ctgcgccgat atgcggaagc
     3841 tggtgctcac gtcctcccca tcctggggtg aatccgtgta gatcgcggga ctgcagaaat
     3901 cgcctttggg cgagcagccg ccatcatagt acgccgtaaa gctggtgctg gcggtgtacg
     3961 cgtggccgag ggcgtcccac gcgaccagct tcagcgtgtg cgaaccggcg gttactggcc
     4021 cggcggtaat aaacacctgg ctctccccgg cagcggggga gtaatccaga tacgtctttc
     4081 cgctcacata ggcgcgcaga tgtgtaatgc gtgcttcacc cttaaagcca gcagcaatct
     4141 ccagattctg ggagactaag gaactcgcca cgggagagca caacctcact cccactgtcg
     4201 actgcgtgca ggaactgggc aggtttcctg tgacgctaaa agtttcgctg gcgttatagc
     4261 tgcgtccgaa atcgtctgtc gcggtaatca caaggtggtg cgttccgttc ggtacgccac
     4321 cgggaaacag gctgaccgta tcgccggagt tctggaagct cagcttgcca tcaatgaaca
     4381 ccttcatgct gctgatgctg ccggaggtcg gcgtggcagc ggcttcaata tgaggaagct
     4441 gatagatcac actgttggcg ctgggctggc acaaggccac acctgcggac gatggagcga
     4501 cacactgcgc acccgcccgg acgggaagca gcgctaaggc agaaaagacg atcaacgcgc
     4561 aagaggaacg gaggatggtg gactgcaact tcataaagca gggccctcga aatgtggagc
     4621 ggattggctt gctgccacat tccaaagcaa tccgaaagcc aagctgctgc tctcagaacg
     4681 gaccaaaaat tcttgaaagg aatgtagaac aacacacacg attggtatgc aaatacacaa
     4741 ccagagtaga tgaaggcatc gtcaggactg ggaagcggtg aggaaaaacc ggcgtgacat
     4801 tcgctcaccg aacgcgctga ctcttctatc ttgcgtgttt tctgaagact gcgtcaattg
     4861 ccgagcgtct gcgaccgcga caagatggcg cgttttggca atacctgagc atcttctata
     4921 atcttcggcc aatgagcgag agtaccgtca aaaccgcaga gccggccgcg agcgccgggc
     4981 cgctggacat cacccagatc caggcgatcc tgccgcaccg cttcccgttc ctgctgatcg
     5041 atcgcgtagt agagatcgaa cgcatgaagc ggatcgtggc gatcaaaaat gtgactatca
     5101 atgagccttt ctttcaggga catttccccg ggtatccaat catgccgggc gtgttgatgg
     5161 tggaagccat ggcacaggca ggaggcacgc tcctgctcac tgagattcct gaccgccaaa
     5221 ataagctcat ggtcttcacc ggcattgaaa gggcgagatt ccgccgtccg gtcgcgccgg
     5281 gagaccagct caggattgag gtagaggtgt tggcatggag gcggatcgcc gtacgcatgg
     5341 gcggaaaggc ctacgttgac ggcaaggtcg cctgcgaagc aactatcagt tgcgcgctgg
     5401 ttgaccgctc cagtggacgc atggcggaat ccggctcagg cgaatgatcc atccctcagc
     5461 agtcgtcgat tcgcaggcta gagttcccgc ttcctgctca atcgggcctt tctgcgttgt
     5521 cggcgcgggt gtggaaatgg gcgagaactg cgaactcatc tctcacgtga acatccaggg
     5581 acccacgcga atcggcagca acaatcgctt ctttcccttt tgcgccattg gcttggagcc
     5641 gcaggacatc agctacaaag gcgagcctac caggcttgag atcggcgata acaatgtcat
     5701 ccgcgagtgc gtcacgctga accgcggcac ggagaagggc ggaggcgtaa cccgactcgg
     5761 cagccacacg ctgatcatgg cctactcgca cgtgggccac gattcccaaa ttggcgacca
     5821 tgcgatgctg gtgaacggtt ccacgctcgc cggccacgta accgtggagg aatgggcggt
     5881 tgtgggggca cttagtccgg tgcaccagta cgtgcgaatc ggcgctcatt cgtatatcgg
     5941 cggcggaacg gttgtgactc aggatgtgct gccgttctcc aagtgcgtga cgccgcggca
     6001 caccaaagct tacggcttga actcggtggg gctcgaaaga cgaggcttca gcaaagagcg
     6061 gatacgtaag attcatcacg cgttccgcgt gctcctgaat tcagggctga atacaagtca
     6121 ggctctggag aagctt
//
LOCUS       DASQYP010000408         6479 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_209323, whole genome shotgun sequence.
ACCESSION   DASQYP010000408 DASQYP010000000
VERSION     DASQYP010000408.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 6479)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6479)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6479
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_209323"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1073)
                     /locus_tag="VE783_13245"
     CDS             complement(<1..1073)
                     /locus_tag="VE783_13245"
                     /inference="COORDINATES: protein motif:HMM:NF013594.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M48 family metallopeptidase"
                     /protein_id="HYX54416.1"
                     /translation="MKLRALLLSSVLGLISLSTVAFAQEQDKTKPSDQTQAQQQPAAD
                     QSQDQSSVQDQQPADSGDKDQDKDKKKKEKKVKHDGSKNDVDAIGNRKVGGWDWYSTE
                     SEIKMGKQYAQQIEQSMKLITDPVVNEYVNRIGQNLVRNSDAKVPFTIKVVDADEINA
                     MALPGGFFYVNSGLILAADDEAELAGVMAHEIAHVCARHATRQMTRAQFANIATIPLI
                     FVGGGIGYAVQQAASIGLPLTFLSFSRGFEAEADYLGVQYMYKAGYDPNEFVNFFEKV
                     QAQEKKKPGTLSKAFSTHPQTPDRIQKTQEEIASILPSKDQYVETTSEFNDVKARLAA
                     IENRRKVDDNSNPNKPTLRRTAN"
     gene            complement(1266..1580)
                     /locus_tag="VE783_13250"
     CDS             complement(1266..1580)
                     /locus_tag="VE783_13250"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX54417.1"
                     /translation="MSLTMLPAFGAEGMFQGTVVDPPTSEPSQRGWIFVKGGNRMLRR
                     VEVSHATVTFGNQVPASQKRHCRMDCIEPGQVVRILAEQDSQGEWRAKQVIILELVTN
                     RT"
     gene            complement(1657..3000)
                     /locus_tag="VE783_13255"
     CDS             complement(1657..3000)
                     /locus_tag="VE783_13255"
                     /inference="COORDINATES: protein motif:HMM:NF019606.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inositol-3-phosphate synthase"
                     /protein_id="HYX54418.1"
                     /translation="MANSASDSQQGTKIAPAKGKLGVMVPGMGAVATTFMAGVEAVRK
                     GIAQPIGSLTQMGTIRLGKRTEGRSPKINQFVPLANLKDIVFTGWDLFEDDAYESAIH
                     AGVLEKDLLNQIKPFLKSIKPRKAVFDRNYVKKLDGKHVKKGKHKMDLAQQLRDDIRE
                     FKKKSGADRLVMIWCGSTEIFLKQSEVHESVQAFERGLLKNDENIAPSMIYAYAALSE
                     GVPFANGAPNLTVDIPVMMELSRRNNAPIAGKDFKTGQTLMKTILAPGFKARMLGLNG
                     WFSTNILGNRDGEVLDDPGSFKTKEESKLSVLDRILQPELYPQLYGNIHHKVRINYYP
                     PRGDNKEGWDNIDIFGWLGYPMQIKVDFLCRDSILAAPIVLDLVLFLDLAQRSEELRG
                     LGVQEWLSFYLKSPMTVPGLYPEHDLFIQSMKLKNTLRHLRGEPLITHLGLEYYD"
     gene            complement(3147..3788)
                     /locus_tag="VE783_13260"
     CDS             complement(3147..3788)
                     /locus_tag="VE783_13260"
                     /inference="COORDINATES: protein motif:HMM:NF020893.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HYX54419.1"
                     /translation="MTEKIIAVLAKIIIGVISSTGYFGVMLLMAIESACMPLPSEIIM
                     PFAGYLVYAGHFSLIWAATAGAVGCNLGSVVAYEIGFYGGRPLVERYGRYIWLNRHDL
                     DIADRFFHKFGAAAVFIGRLLPVIRTFIALPAGIARMNRTRFHIYTFVGSWPWCFVLA
                     WFGMKLGEQWDKDPRLKQWLHRLDALIVLFVLAALVWFVRSHWKNRMRAEART"
     gene            complement(3810..4034)
                     /locus_tag="VE783_13265"
     CDS             complement(3810..4034)
                     /locus_tag="VE783_13265"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX54420.1"
                     /translation="MVKTVQPGQIWRSNENGANFLVTKVYSELFTQFAMLRPASAAAP
                     EAETIRVKVSKQDEGMTLPGYTFTQDSQEF"
     gene            complement(4063..4914)
                     /gene="hemQ"
                     /locus_tag="VE783_13270"
     CDS             complement(4063..4914)
                     /gene="hemQ"
                     /locus_tag="VE783_13270"
                     /EC_number="1.3.98.5"
                     /inference="COORDINATES: protein motif:HMM:NF008913.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004601 - peroxidase activity [Evidence
                     IEA];
                     GO_process: GO:0006785 - heme B biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogen peroxide-dependent heme synthase"
                     /protein_id="HYX54421.1"
                     /translation="MATIPKVGSEKLYAVPLTLEGSSVLHQMFRFRWAEWRKLAAAQQ
                     KEILAEAGAALEKLEQHVSGQTALYSMLGHKAELMLVHFRNEFDHLKHAELEIARLRL
                     TDYLEQTHSFVSVVELGLYESSLKLYRTLQEKGVEPHSSEWDKTVKDTVQRQTEAMRP
                     RLFPQIPPARYVCFYPMDRKRGEEKNWYSLPIEERQRQMEEHGMVGRRYAGTVKQIIS
                     GSIGFDDWEWGVDLFADDPVIFKKLIYEMRFDEVSAVYALFGQFFVGVRVPGGKIEDL
                     FSGKLPE"
     gene            4973..5737
                     /gene="nth"
                     /locus_tag="VE783_13275"
     CDS             4973..5737
                     /gene="nth"
                     /locus_tag="VE783_13275"
                     /inference="COORDINATES: protein motif:HMM:TIGR01083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003906 - DNA-(apurinic or apyrimidinic
                     site) endonuclease activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease III"
                     /protein_id="HYX54422.1"
                     /translation="MRVAQRKAGKATAKTKARKTAPSKISKSKYDPLAPERVKAILDR
                     LEERYPKATCALTHRSAWELLVATILSAQCTDATVNKVTPELFRQYPTPQSLAAIKPE
                     QLEPLIKSTGFFRNKAKSLVGAAKGVVESFGGQVPEEMDQLLTLPGVARKTANVVLGT
                     WFHKAIGVVVDTHVHRISRRLELTKSTDAKNIEQDLMKVLPQSKWIEFSHQIIHHGRA
                     LCIARKPKCAECPLETLCHAADKTWSTVEIHKAAKP"
     gene            5749..>6479
                     /locus_tag="VE783_13280"
     CDS             5749..>6479
                     /locus_tag="VE783_13280"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX54423.1"
                     /translation="MIAKIAGIEMPLGLLIVLAALALLTCSAFAQIQATPPPDAAITD
                     PAQITSRQNPLVQPFTIEKLYMTHAIGDSTWSPDDKQIAFVSNISGRHNIWVVSSQSG
                     WPTQLTVSNQRQLNIAWSPKGRWIAYNSDYDANEQWDLFLVSVDNGQVVNLTNTPEVA
                     EEGAAWSPDGEKIAYSVKPKQSPSYEIDTIDILTKKITHITSNTPAQLSNVYSIWSKD
                     GKSIVFTQQRADAKDANIFIVSATGG"
BASE COUNT         1418 a         1871 c         1745 g         1445 t
ORIGIN      
        1 ttgttcgctg tacggcgaag cgtcggctta ttcggattgc tgttgtcatc caccttccgg
       61 cggttctcaa tggccgccaa acgagccttt acgtcgttga attctgacgt ggtttccacg
      121 tactggtcct tcgaaggcag gatgctcgca atctcttcct gcgtcttctg gattcggtct
      181 ggcgtctgcg gatgggtgga gaaggccttt gacaacgtgc ccggcttctt cttttcctgc
      241 gcctgaacct tttcaaagaa gtttacaaac tcgttcggat cgtagccggc cttgtacatg
      301 tactggacgc ccagataatc ggcttcggct tcaaaaccac gggagaagct caggaaggtg
      361 agcggcaacc caatgctagc tgcctgctgg actgcatatc cgattccgcc gccaacgaag
      421 atgagcggga tggtagcaat attcgcgaac tgagcccgcg tcatctggcg agtagcatgg
      481 cgagcgcaga cgtgggcgat ctcgtgggcc ataacgccgg cgagttcagc ttcatcatcg
      541 gccgccagaa tcaggcctga attcacatag aagaagccgc cgggcagcgc catcgcgttg
      601 atctcatcag cgtctacgac cttgatcgta aaaggcacct tcgcgtcaga attccgcacc
      661 aggttctggc caatccggtt tacgtattcg ttgaccaccg gatctgtgat gagcttcatg
      721 ctctgctcaa tctgctgggc atactgcttg cccatcttga tttcgctctc ggtggaatac
      781 cagtcccaac cgcccacttt gcggttcccg atggcatcca catcgttctt gctgccgtcg
      841 tgcttaacct tcttttcctt ctttttctta tctttatctt ggtccttgtc accgctgtca
      901 gcgggctgct ggtcctggac agaggactga tcctggctct gatcggctgc aggctgctgt
      961 tgtgcctgtg tctggtcaga cggcttcgtc ttgtcctgct cctgggcaaa ggcaacggtg
     1021 gaaaggctga ttaggccaag gacggacgag agcaataaag ctcgcagttt catgaggcac
     1081 actcctgcaa ttcgggcctt gagaggatac gtgtccccat tataccgccc ggacttgcat
     1141 gctctttaat agattttctc cgtgatggat tggatgcagg attcaggcgg gaacgttatc
     1201 ctgctgctct caggagagcg ggttaattta tgtaaatccc tgtttttggg gtaaacagcg
     1261 cattttcagg tgcgatttgt gaccaactct aggatgatca cctgtttggc ccgccactcc
     1321 ccctgagaat cctgctctgc cagaatccga accacctgtc ctggctcgat gcaatccatc
     1381 cggcagtggc gtttctggct ggcaggcact tgattaccga aggtcacggt cgcgtgggaa
     1441 acctcaacac gtcgcagcat gcggtttcca ccctttacga aaatccatcc cctttgcgag
     1501 ggctcgctcg ttggcggatc caccaccgtc ccttggaaca tgccctcagc gccgaaagcg
     1561 ggcaacatgg tcagggacat acaaaagagc aaggcgcaag cgaggttccg ctgcataacg
     1621 gttctgatgc aagccggaac gctggtgttc tctttctcag tcgtaatatt ccagaccaag
     1681 atgggtgata agcggttccc cgcgaaggtg gcgcagcgtg ttcttaagct tcatggattg
     1741 aatgaagagg tcgtgttccg gatagagacc cggcacagtc atgggcgact tgagataaaa
     1801 gctgagccac tcctgcacgc caagtccccg cagctcttca ctgcgctgcg ccaggtccag
     1861 gaacagcacc aggtcaagca cgataggcgc ggcaaggatc gagtcgcgac acaggaaatc
     1921 gaccttgatc tgcatcgggt atccgagcca gccgaaaata tcgatgttgt cccagccttc
     1981 tttattgtct ccgcgcggcg ggtagtagtt gatccggacc ttgtgatgga tgttgccgta
     2041 gagctgcgga tacagctccg gttgcaaaat gcggtcgagc acggagagct ttgattcttc
     2101 cttcgtcttg aacgacccgg gatcgtccag cacttcgccg tcacgatttc ccaggatgtt
     2161 ggtggagaac catccgttca gcccaagcat gcgcgccttg aaccccggcg ccaaaatggt
     2221 cttcatcagc gtctggccgg tcttaaagtc tttgcctgcg ataggagcat tattgcggcg
     2281 ggagagttcc atcatcaccg ggatgtccac ggtcaggttg ggagcgccgt tggcaaacgg
     2341 cacgccttcg gaaagagccg cgtaggcata gatcatagaa ggcgcgatgt tctcatcgtt
     2401 cttcaggagc ccgcgctcaa acgcctgtac tgactcgtgc acttcactct gcttcaggaa
     2461 tatctccgtg gagccgcacc agatcatcac cagccggtca gcaccggact tcttcttgaa
     2521 ctcccgaatg tcatcgcgaa gctgctgggc aaggtccatt ttgtgcttgc ccttcttcac
     2581 gtgcttgccg tcaagcttct ttacgtaatt gcggtcaaac accgccttgc gcggcttaat
     2641 cgattttaaa aagggcttga tctggttcaa caggtctttc tcaagcacac ccgcgtgaat
     2701 cgcggattcg tatgcgtcat cttcaaagag atcccagccg gtaaaaacaa tgtctttcag
     2761 gttcgcgagc ggaacaaact gattgatctt gggtgagcgg ccttccgtgc gcttgcccag
     2821 ccggatggtg cccatctgcg tcaacgagcc aatgggctgc gcgatgccct tccgcaccgc
     2881 ctccacaccc gccatgaagg tggttgccac ggcgcccatg cccggaacca tcacgcccag
     2941 cttgcccttt gccggagcga ttttcgtgcc ttgctgcgaa tctgaagcag agttagccat
     3001 tccttttagg accatcctga gtggttttga ggagcttcaa atcaagatca gcgctccgcc
     3061 gtgaaccggc agcgtaagtc agcgatcaag atgtgagtgc aaactcacta tcttctcgca
     3121 ttggcgcgtt gtttgtaaac cgttgactag gttcgcgctt cagcgcgcat gcggttcttc
     3181 cagtgggagc gcacaaacca cacgagggcc gccaacacaa aaagaacgat tagcgcatcc
     3241 agacggtgca gccactgctt caatcgcggg tctttatccc actgctcacc cagcttcatt
     3301 ccgaaccatg ccagcacaaa gcaccacggc catgacccaa caaatgtgta gatatgaaaa
     3361 cgcgtgcgat tcatgcgggc aattcccgca ggcaaagcaa tgaaggtgcg gatcaccggg
     3421 agcaatcggc cgatgaaaac cgctgccgcg ccgaatttgt gaaagaaacg atccgcaata
     3481 tcgagatcgt gccggtttag ccagatatat cgtccatagc gctccaccag aggacgtccc
     3541 ccgtaaaacc cgatctcgta agcaaccacg gagcccagat tgcagccgac tgcgcctgct
     3601 gtggcagccc agatcaggct gaagtggccg gcatacacca gatagcccgc gaacggcatg
     3661 atgatttccg atggcagcgg catgcacgcc gactcaattg ccatcagcag catcacgccg
     3721 aagtatccgg tggaggagat gactccaatg atgattttgg ccaggacggc aatgattttt
     3781 tcagtcattc agattggaag acgcgctgct cagaattcct gcgagtcctg cgtaaatgtg
     3841 tagccgggca gagtcatgcc ttcatcctgc ttgctcacct tcacgcgaat cgtttctgcc
     3901 tccggcgcgg ccgcgctggc gggccgaagc atggcgaact gggtaaataa ctcgctgtac
     3961 actttggtga ccagaaagtt ggcgccgttt tcattactgc gccagatctg ccccggctgg
     4021 acggttttga ccatagattg aacctgactg acgttccttt tgttattccg gtaacttacc
     4081 gctgaacaaa tcttctattt tgccgcccgg cactcgcacg cccacaaaga actgcccgaa
     4141 gagtgcatac actgcgctga cttcgtcaaa tcgcatttcg taaatcaatt tcttgaagat
     4201 cacaggatcg tcggcaaaca ggtccacgcc ccattcccag tcgtcgaacc cgattgatcc
     4261 actgataatc tgcttcaccg tcccggcata acggcggccg accatgccgt gttcttccat
     4321 ctggcgctgg cgttcttcaa tgggaaggct ataccagttc ttctcttccc cgcgcttgcg
     4381 gtccatcggg tagaagcata cgtaacgcgc cggcggaatc tgaggaaaga gccgcgggcg
     4441 catcgcttcg gtttggcgct ggacggtatc cttcactgtc ttgtcccatt cggacgagtg
     4501 cggttccaca cctttttcct gcagagtgcg ataaagcttc agcgaggatt cgtagaggcc
     4561 aagctcaacc actgatacga acgagtgcgt ctgctccagg tagtcggtca accgcaggcg
     4621 agcaatttcg agctcggcat gcttcaaatg atcaaattcg ttgcggaagt gcaccagcat
     4681 gagctcagcc ttgtggccca gcatggaata gagcgcggtc tggccggaaa cgtgctgttc
     4741 cagcttttcc agtgcggcgc cagcttcagc caaaatctcc ttctgctgcg cggcagcaag
     4801 cttgcgccac tccgcccagc ggaaacggaa catctggtgc agcacgctgg agccttccag
     4861 cgtaagcggc accgcataca gtttttcgct cccgactttt ggaatcgtgg ccatggaact
     4921 ctctaacctc cgctattgtg attgtaaggc ccctgcttta aatttcctta ctatgcgagt
     4981 cgcgcaacgc aaagcaggca aggccacggc caaaacaaag gcccggaaaa cggcaccttc
     5041 caagatatca aagagcaaat acgatccgct cgcgccggag cgggtgaaag ccatcctcga
     5101 tcggctggag gagcgctatc caaaggcgac ctgtgcgctc acgcaccgca gcgcatggga
     5161 gctgctggtg gccacgattc tttccgccca atgcaccgat gcgacggtga acaaggtgac
     5221 gcctgagctc tttcggcagt atccaacacc gcagtcgctc gcggcgatca agccggagca
     5281 gctcgagccg ctgatcaagt cgaccggctt ctttcgaaat aaagccaagt cactggttgg
     5341 tgctgcaaaa ggggttgtcg agagctttgg cgggcaggtt ccggaagaaa tggaccagct
     5401 actcactctt cccggcgtcg cccgtaagac tgccaacgtg gtgctcggga cgtggttcca
     5461 taaagcgatc ggcgtggtgg tagatacgca tgtgcaccgc atttcgcggc gcctggaact
     5521 aacgaagagc accgacgcta agaacatcga gcaggacctg atgaaggtgc tgccgcaatc
     5581 caagtggatc gagttctcgc accagatcat ccatcatggg cgcgcgctgt gtattgcccg
     5641 taagcccaag tgtgcggaat gtccactgga gacgctctgc cacgccgcag ataagacatg
     5701 gtcgacggtg gagattcaca aggcagcaaa accgtgaggc caactaccat gatcgccaaa
     5761 attgccggca ttgaaatgcc gttgggtctt cttatcgtgc ttgcggccct cgctttgctg
     5821 acttgcagcg catttgctca gattcaagct acaccacctc cggacgcggc catcaccgat
     5881 cccgcacaga tcacctccag gcagaacccg cttgttcagc ctttcaccat tgaaaagctc
     5941 tacatgacgc acgccatagg cgacagcacg tggtcgcctg acgataagca gatcgcattt
     6001 gtcagcaaca ttagcggtcg gcacaacatc tgggtggtgt cttcgcaaag tggctggccc
     6061 acgcagctca ccgtaagcaa ccagcgccag ctgaatattg catggtcccc caagggccgc
     6121 tggatcgctt acaactcgga ttatgacgcg aacgaacaat gggatctatt tctggtttcc
     6181 gtcgacaacg ggcaggtggt gaatctcacg aataccccgg aggtcgcgga ggagggcgca
     6241 gcatggtcgc ccgacggaga gaagattgcc tacagcgtaa agccgaagca gtcgccaagt
     6301 tacgagatcg acaccatcga tattctgacg aagaaaatca cgcacatcac cagcaacacg
     6361 cccgcacagc ttagcaatgt gtattccatc tggtcgaagg acgggaaatc gatcgtcttc
     6421 acgcagcagc gggccgatgc caaggatgcg aacatcttca tcgtgagcgc gaccggcgg
//
LOCUS       DASQYP010000409         5278 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_209377, whole genome shotgun sequence.
ACCESSION   DASQYP010000409 DASQYP010000000
VERSION     DASQYP010000409.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 5278)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5278)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5278
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_209377"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            149..1282
                     /gene="obgE"
                     /locus_tag="VE783_13285"
     CDS             149..1282
                     /gene="obgE"
                     /locus_tag="VE783_13285"
                     /inference="COORDINATES: protein motif:HMM:NF008955.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase ObgE"
                     /protein_id="HYX54424.1"
                     /translation="MFIDQAIIKVKAGDGGNGCMAFRREKFVPRGGPSGGDGGRGGDI
                     IMESSERHNTLVHFRFNPEYKAQRGRHGEGSNCTGRDGESIVLKVPVGTMVYDNATGE
                     KLHDFSHPDERITIAQGGRGGRGNQHFATSTHQAPTEHEPGKPGDERTLRLELKLLAD
                     VGLVGYPNVGKSTLISRISAARPKIADYPFTTLQPNLGVVTIGEMPNEESYVVADIPG
                     LIEGAHTGTGLGTQFLRHIERTRVLAHVVDVSDASGRPDPVKDFNVIMSELESFGAEL
                     EKKPMMVIASKIDVANPEKLEKLRKLAKKLRLDLYEISAVTGKGIPELKYGLGRRVAE
                     IRSGNYEVRKPARKKAASSRKARKTETKRRIPKRAAFKKRKSR"
     gene            1305..2057
                     /gene="nadD"
                     /locus_tag="VE783_13290"
     CDS             1305..2057
                     /gene="nadD"
                     /locus_tag="VE783_13290"
                     /EC_number="2.7.7.18"
                     /inference="COORDINATES: protein motif:HMM:NF000840.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016779 - nucleotidyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0009435 - NAD biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinate-nucleotide adenylyltransferase"
                     /protein_id="HYX54425.1"
                     /translation="MKIALFGGTFDPVHRGHLAVARTAADEFGLSLVYFAPADIPPHK
                     QKRRLTDFQHRFAMLALATAEDKRFVPSLLDSYTGQPNYSIDSVRRLKKTLKKSDKLY
                     FLIGMDAFKDISTWRMPEELLAECEFIIANRPGYSLADAAKALPRNLQPSDGYLRSLR
                     TERGFQNSGSLALPGATLHLLKDVHERVSSTQIRAAAAKSARQLARYVPPLVAEYIRK
                     EHLYHPVGRSSEATPGVKMLSFHETPSGAVKQ"
     gene            2078..2566
                     /gene="rsfS"
                     /locus_tag="VE783_13295"
     CDS             2078..2566
                     /gene="rsfS"
                     /locus_tag="VE783_13295"
                     /inference="COORDINATES: protein motif:HMM:TIGR00090.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043022 - ribosome binding [Evidence IEA];
                     GO_process: GO:0017148 - negative regulation of
                     translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome silencing factor"
                     /protein_id="HYX54426.1"
                     /translation="MSKETREQVALAVKAVESKKGEEVVILEMDRAAGAFTDYFVICT
                     GTNPRQIQAIADEVERLVHQAGGRPNSVEGYNQAEWVLLDYVDFVVHVFSERSRGFYD
                     LERLWKSAKRLQPGDLLKKRAGAAAKKPAKKVVRASGRKAAAKSAKARSGAAKKKARK
                     HS"
     gene            2563..3006
                     /locus_tag="VE783_13300"
     CDS             2563..3006
                     /locus_tag="VE783_13300"
                     /inference="COORDINATES: protein motif:HMM:NF014629.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA
                     (pseudouridine(1915)-N(3))-methyltransferase RlmH"
                     /protein_id="HYX54427.1"
                     /translation="MKLQIAWIGKTKEPAFRALTDEYLKRISRYAQAESHEMANEDAL
                     LAMASDITGRTRPVLILLDGRGRQFTSEEFAELLRDQQDRGTQNLFFGVGPADGFSDK
                     GRHSADLILSFGKMTLAHELARVVLLEQIYRAFTILKGHPYHTGH"
     gene            complement(3288..3557)
                     /locus_tag="VE783_13305"
     CDS             complement(3288..3557)
                     /locus_tag="VE783_13305"
                     /inference="COORDINATES: protein motif:HMM:NF021452.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2164 domain-containing protein"
                     /protein_id="HYX54428.1"
                     /translation="MTIELSRQQRADASASIKRYFRENMPEPIGDLAADLLLNYILEE
                     IGPAIYNRAIADAQARMQQRVQDLDSELYVEAFQYWPNLDKKKKK"
     gene            complement(4041..5036)
                     /gene="cysK"
                     /locus_tag="VE783_13310"
     CDS             complement(4041..5036)
                     /gene="cysK"
                     /locus_tag="VE783_13310"
                     /EC_number="2.5.1.47"
                     /inference="COORDINATES: protein motif:HMM:TIGR01136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004124 - cysteine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0006535 - cysteine biosynthetic process
                     from serine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine synthase A"
                     /protein_id="HYX54429.1"
                     /translation="MNIHSDITRTIGRTPLVRLNKLTAGMGATVVAKLESFNPCHSVK
                     DRIGVSMLDEAEKAGRVQPGKTVLIEPTSGNTGIGIAFAAAARGYRLVLVMPDTMTLE
                     RRVVLLAMGAEIVLTPGPKGMKGAISKAKELLQQTPNGVILQQFANPANPKIHRETTG
                     PEIWQDTDGKVDILVSGVGTGGTLTGVAEYIKPKKSSFKVVAVEPAESAILSGGKPGP
                     HKIQGIGTGFVPDVLKRELIDEVLTVTLEESLETAKRMAKEEGIFIGISGGAAIASAL
                     KVAARKENDGKLIVVVVPDFGERYLTSVLFENLRQEALALPTVDADIDKYYAAVI"
BASE COUNT         1100 a         1632 c         1524 g         1022 t
ORIGIN      
        1 accgcgcagc cctggagaat ttctctgtca gaaacgaaga ccggccaatc catgaagtcg
       61 cgacggaaat gcttacctgt gccggctggc agtagcttcg tccagagccg gaatcccatt
      121 ttgcccctgt acaatcaaat acataagcat gtttattgat caggcaatca tcaaggtgaa
      181 ggccggcgac ggcggcaacg gctgcatggc cttccggcgg gaaaaatttg tccctcgcgg
      241 aggtcccagt ggcggcgacg gcggacgcgg cggcgacatc atcatggaat ccagcgagcg
      301 ccacaatacg ctcgtccact tccgcttcaa tcccgaatac aaggcccaac gcggacgcca
      361 cggcgagggc tccaactgca ccggtcgcga cggtgaaagc attgtgctga aggtcccggt
      421 cggcaccatg gtctatgaca atgcgaccgg tgagaagctg catgacttct cccatcccga
      481 cgagcgcatc accatcgccc agggcgggcg cggcggccgt ggcaaccagc acttcgccac
      541 cagcacccat caggcgccta ccgagcacga acccggcaag cccggcgatg aacgcaccct
      601 gcgtcttgaa ctcaagttgc tggcggatgt gggtctggtt ggttatccga acgttggcaa
      661 gtcaacgctg atctcgcgca tttctgccgc acggcctaag atcgccgact acccgttcac
      721 caccctgcag ccgaacctcg gcgtagtcac gatcggcgag atgcccaatg aggaaagcta
      781 cgtagtcgcc gacattcccg gactgatcga gggcgcgcat accggcaccg gtctgggcac
      841 acagtttctc cggcacatcg agcgcacgcg cgtgctcgcc cacgtggtgg atgtttctga
      901 tgccagcggc cgccctgatc cagtaaaaga cttcaacgtg atcatgagcg aactggaaag
      961 ctttggcgcg gagctggaaa agaagccgat gatggttatc gcttcaaaga ttgacgtggc
     1021 caatccggaa aagctggaaa agctgcgcaa gctggcgaag aagctgcggc tggaccttta
     1081 cgaaatttcg gcagtcaccg gaaaaggcat tcccgaattg aagtatggcc ttggccgccg
     1141 cgtggccgaa attcgctccg ggaactatga agtccggaag ccggcgagga agaaagcggc
     1201 ttcatcacgc aaggcgcgca agactgaaac caagcgccgc attcccaagc gcgcagcttt
     1261 caagaagaga aagagcagat aagccggttg gagcgcagcg acaaatgaag atagcactgt
     1321 ttggcgggac attcgatccg gtgcatcgcg gccatcttgc cgtggcgcgc accgctgcgg
     1381 acgagttcgg cctctcgctt gtctactttg cgcctgcgga tattccgccg cacaagcaaa
     1441 agcggcggct cactgacttt cagcaccgct ttgccatgct cgcgctcgcc acggcggaag
     1501 acaagcgttt tgtgccctcg ctgctggatt cctacaccgg ccagccgaat tactccattg
     1561 acagcgttcg ccgcctcaag aagacgctca aaaaatcaga caagctctat ttccttatcg
     1621 gcatggacgc cttcaaagac atcagcacct ggcgcatgcc ggaagagctg ctcgcggagt
     1681 gcgaattcat catcgccaac cggccggggt attcgctggc cgacgcagcc aaagctttgc
     1741 cgagaaactt gcagccgtca gacggctatc tgcgcagcct gcggacagag cgcggctttc
     1801 agaacagcgg cagtctggcg ctgcccggcg ctaccctgca cctgctcaag gacgttcatg
     1861 agcgcgtctc gtccactcag atccgtgcgg cggcagccaa atcggcaaga cagcttgccc
     1921 gctacgtccc gccgctcgtg gccgagtaca tccgcaaaga gcacctctac catcccgtcg
     1981 gtcgaagcag tgaggccact ccgggcgtaa agatgctatc ttttcatgag accccatctg
     2041 gcgccgtaaa gcagtaaaca tcatccaaga ggagcgaatg agtaaggaga ccagggaaca
     2101 ggttgcgctg gccgtaaagg ccgtggaaag caaaaaaggc gaggaggtag tcatcctgga
     2161 gatggaccgc gcagcaggcg cgttcactga ctactttgtc atctgcactg gcaccaaccc
     2221 gcgccagatt caggccattg ctgacgaggt ggagcggctc gtacaccagg ccggaggccg
     2281 ccccaatagc gttgaaggct acaaccaggc cgagtgggtc ctgctcgatt acgttgactt
     2341 cgtggtccac gttttctccg agcgctcgcg cggcttctac gacctggagc ggctctggaa
     2401 atccgccaaa cggcttcagc ccggcgatct gctgaagaag cgcgccggcg cagcggcgaa
     2461 gaagcctgcc aagaaagttg ttcgtgcaag cggccgtaaa gcagcggcta aatctgccaa
     2521 agccaggagt ggagccgcaa agaagaaggc gcgtaagcac tcgtgaaact gcaaatcgcc
     2581 tggattggca aaaccaaaga gcctgcattc cgcgcactga ctgacgaata cctcaagcgc
     2641 atctcccgct acgcacaagc cgaatcgcac gagatggcga atgaagatgc gcttctcgcc
     2701 atggcgtctg acatcaccgg ccgcacccgg ccggtcctta ttctgctcga tggccgcggc
     2761 cgccagttca cctcagaaga atttgccgaa ctgctgcgcg accagcagga ccgcggtacc
     2821 cagaaccttt tcttcggcgt tggccctgcc gatggcttca gtgacaaggg ccgccactcc
     2881 gccgacctga tcctctcctt cggcaaaatg accctggccc acgaactcgc ccgcgtggtg
     2941 ctgctggagc agatctaccg cgcgtttacc atcctgaaag gccatcctta ccacacgggg
     3001 cactgacttc cgaaccaccc tggaaacaca gagggacaga ggacgcagtc aagttatagc
     3061 ggcggagccg gcagtgcgat tgggcgagca taccctctcc cgctttcctg tggagcgggg
     3121 cgcgcgagga gcttgcgagt tacgcgcgca gtcgaaatcc cgacgatgta tcctttgcca
     3181 ggccgatcca gggagttttg gcccatatgc attccccgtc gctctttgag aggagcacac
     3241 cggtcgctgc tcataaacat gaacggtaga gcctctctcc ggcgggctca cttcttcttt
     3301 ttcttgtcga gattgggcca gtactggaac gcctccacgt agagttcgct atccaggtcc
     3361 tggacgcgct gctgcatgcg cgcctgggcg tccgcaatgg cgcggttgta gatcgctggg
     3421 ccgatttctt ccaggatgta gttgagcagc aggtcggccg caagatcgcc aatcggctca
     3481 ggcatgttct cccggaaata tcgcttgatg gacgcgctcg cgtcagcgcg ctgctgcctg
     3541 gaaagctcga tggtcatggc cagataagtt tgccacaggc gtggcgcttg ctcatacggc
     3601 tgcgcatcgc gctgggcttt tgtgccgctc cgctttgctc cgcggcgggc ctacggcgtg
     3661 tggaactggt ctttattccc cccaaccggg gacttccgcc accccaatgc acgagaaccg
     3721 tgtgcattgg gaccccggtt tgtccccagc tacagattgt tccgtcgctg cgcgacttgg
     3781 gcagagctgg gcagagagac tcctggccat caacggcgca ggtgactcta aaaaaaggca
     3841 caaccgttct ctggctgagc cgaacacaat gttccgcgtt tacccgcgct gatccgcggt
     3901 agccttcctg tggctgattg gagagtaacc ggcacaggcg gggcacctcc atcccaacaa
     3961 accaacaacg ggttcgttgg ggaccccggc gcctgtgcta tagagcgtgt tatccgaccc
     4021 agtcatgtat gaaacagctt ttagatcact gccgcgtagt acttatcgat atcggcgtcc
     4081 acggttggga gcgccagcgc ttcctggcgg aggttctcaa acagcacgct ggtcaggtag
     4141 cgctcgccaa agtccggcac caccaccaca atcagcttgc catcattttc cttgcgcgcg
     4201 gccactttca gcgcgctggc aatcgccgcg ccgccagaga tgccaatgaa aatgccttct
     4261 tctttggcca tgcgtttggc cgtctcgagc gattcctcga gcgtgacggt gagcacttca
     4321 tcaatcagct cgcgcttcaa cacgtccggt acaaagccgg tgccgattcc ctggatcttg
     4381 tgcggacccg gcttgccgcc ggaaagaatg gccgactcgg cgggctccac ggccaccacc
     4441 ttgaagctgg acttcttcgg cttgatgtac tcggccacgc cggttagcgt gccgcctgtg
     4501 cccacgccgg aaaccaggat gtcgactttg ccgtcagtgt cctgccagat ttccgggccg
     4561 gtggtctcgc gatggatctt cggattcgcc gggttcgcga actgctgcaa gatcacgccg
     4621 ttgggcgtct gttggagcag ctccttggcc ttggagatgg cccccttcat gcccttgggc
     4681 ccgggcgtga gcacgatttc ggcgcccatg gccagcagca ccacgcgccg ctccagcgtc
     4741 atggtgtccg gcatcaccag caccagccgg tatccgcgcg ccgccgcggc aaaagcaatg
     4801 ccgattccgg tgttgccgct ggttggctca attaacaccg tcttgccggg ctgcacgcgt
     4861 cccgccttct ccgcttcatc cagcatgctt acgccgatgc ggtcttttac gctgtggcag
     4921 gggttgaagc tttccagctt ggccacgacg gttgcgccca tgccggccgt aagcttgttc
     4981 agacgcacga gtggcgtccg gccgatggtc ctggttatat ccgaatgaat gttcatctct
     5041 ccaccttcct tatttatggc tggttaaagt caggcgtccc gcgagaggtc tataagatta
     5101 cgcccaatgc aaaaaggacg caaagatttg gccgtgaatg aaggcgaaaa ggcgcgaacc
     5161 cgagaacaca ttagccactg atgaacactg acgagcactg atatacggac cgagagggag
     5221 aggcgctagt atctaacctg tgttcgagcc gattccatgg ccgtttttcc tcatcatc
//
LOCUS       DASQYP010000410         4070 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_251512, whole genome shotgun sequence.
ACCESSION   DASQYP010000410 DASQYP010000000
VERSION     DASQYP010000410.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 4070)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4070)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4070
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_251512"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..264
                     /locus_tag="VE783_13315"
     CDS             <1..264
                     /locus_tag="VE783_13315"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX54430.1"
                     /translation="RNRPLEFTDPERYPKALLLDRFRQAIASVRETLARQSPQEFCAA
                     YSAKGLEHAGTRFYLFVNCVAHLAHHIGQMIYLCRELERQAGN"
     gene            327..1091
                     /locus_tag="VE783_13320"
     CDS             327..1091
                     /locus_tag="VE783_13320"
                     /inference="COORDINATES: protein motif:HMM:NF018473.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1223 domain-containing protein"
                     /protein_id="HYX54431.1"
                     /translation="MARTLALLLVLSGLIVISLLLTSPSAAAPPARKAVVVELFTSEG
                     CSSCPPADELLRKLAENSPSDGVEVIPLGFHVDYWNHLGWRDRFSDAAYSKRQEEYAR
                     RFRLDGPYTPQTVIDGSSELVGNDKSGLAKAIASAAAQPQPADVQLNLSVAGKLAVKV
                     LAPQSASGDVWLAITENNLSSQVSAGENIGHTLRHAAVVHEFRRIGALQNGGFNTDIP
                     IALQKDWKRNDLVISVFVQSAAQGPVLGAAAVRSPK"
     gene            complement(1117..2004)
                     /locus_tag="VE783_13325"
     CDS             complement(1117..2004)
                     /locus_tag="VE783_13325"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX54432.1"
                     /translation="MRTTFHIITVILLALAPDTGMFAQTTQAAQQSINASPADALLDQ
                     AFLDMYNLKFDEAMKLAETAKRYNPEDPLPWMAQACAALFREFDRLHILSSDMFTSDE
                     KFSSRKEQAWIPQNRKQFEDALNGAEKLGKERLASDPEDPRALFVMTLASGLRADDAA
                     LIAKKNMGALSFTKTGNQYAEKLLARHPDYYDAYVATGLGKYIIGGKAAPVRWMLRLG
                     GLKGDQEEGVKELRLVAQKGHYLAPYARILLAFDDLRRKDKDAARKKFAELHQQFPGN
                     PLFTAEIEKIDHPVPKAGG"
     gene            2267..3244
                     /locus_tag="VE783_13330"
     CDS             2267..3244
                     /locus_tag="VE783_13330"
                     /inference="COORDINATES: protein motif:HMM:NF012376.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HYX54433.1"
                     /translation="MVKKHIPRTADELLHDHNHDGIDRRGFLKCMAWAGTGAFCVMKG
                     GVLRSYSLSRLAEMAPKEAHGELSFVQISDSHMGFDKAANPDVVGTFKSAIEKINALP
                     TPPQFILHTGDITHLSKPQEFDTVQQLLQSAPAKDVFYVPGEHDMVDEGAEFRQRFGK
                     NAQGDGWYSFDHKGVHFVGLVNVVNLKAGGLGNLGNDQLEWLKKDVKHLSKSTPVVVF
                     AHIPLWSVYPEWGWGTEDGAQALSYLKRFGSVTVLNGHIHQTMQKVEGNITFHTAAST
                     AFPQPKPGEAQSPGPMKVPADQLRSLLGVTDVKAVHGKHALAVVDSTLG"
     gene            3288..3629
                     /locus_tag="VE783_13335"
     CDS             3288..3629
                     /locus_tag="VE783_13335"
                     /inference="COORDINATES: protein motif:HMM:NF024864.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupredoxin family copper-binding protein"
                     /protein_id="HYX54434.1"
                     /translation="MKMKLVAFSIVVIAALTAAIFAAPGGQPAAPAVTEVKIDNFSFN
                     PPAMKVKAGSTVHWTNRDDLPHNVVAEDKTFRSKVMDTDEQFSFTFEKPGTYSYFCGL
                     HPKMRATITVE"
     gene            3662..>4070
                     /locus_tag="VE783_13340"
     CDS             3662..>4070
                     /locus_tag="VE783_13340"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HYX54435.1"
                     /translation="MGRQNADFERLALPLLDPLYNYARWLCGDADESRDLVQETFTKA
                     LKGFSGFQPGTNFRAWMFRILRNTFLTSRVGLERRNTEQEGEGGLDNTPSAHDTPELL
                     LIRRADTELVQQGIAALDLRFREVLILADLEEMK"
BASE COUNT          872 a         1156 c         1190 g          852 t
ORIGIN      
        1 cgcaaccggc cgctggagtt tactgatcct gagcggtacc caaaagcact gctgctcgat
       61 cgcttccgcc aagccatcgc ctcggttcgc gagacgctgg cgcgccagtc gcctcaagag
      121 ttctgcgccg cttactccgc caaaggactg gagcacgcag gcacgcgctt ctacctgttc
      181 gtgaactgcg tcgctcacct ggcccaccac attggacaga tgatctatct ctgcagggaa
      241 ctggaacggc aggctggaaa ctgacggtgc atcacatcga tgctgaaggt tttgtatcca
      301 aatgttggcc cctgcatctc atccccatgg caagaacgct ggcgcttcta ctcgtgcttt
      361 ccggattgat tgttatctct ctcttgctca catctccttc ggctgccgca ccacccgccc
      421 gcaaggctgt ggtggtggaa cttttcactt cggagggatg ctcaagctgt ccgccggccg
      481 acgagctctt acgaaagctg gcggagaact cgccgagcga cggtgtggag gtgattcccc
      541 tcggctttca tgtggattac tggaatcatc tgggctggag agaccgcttt tctgacgcgg
      601 cctacagcaa acgccaggaa gagtacgcgc gcagatttcg gttggatggc ccttacacac
      661 cgcagacggt gattgacggc agctccgagt tggtggggaa tgacaagtct ggtctggcga
      721 aggccattgc ctcagcggcc gcgcagccgc agcctgcgga cgtgcaatta aacctgagcg
      781 tcgccggcaa gttggcagtc aaagtcttag cgcctcaatc tgcctcgggc gacgtgtggc
      841 tggccataac cgaaaataat ctttccagcc aagtctcagc gggagagaac attggacaca
      901 ctttgcgcca cgccgcggta gtgcatgagt tccggcgtat cggcgcactg cagaatggcg
      961 gcttcaatac cgacatcccc attgcgctgc aaaaagattg gaagcgcaat gatcttgtga
     1021 tctcagtttt cgtccagtcg gcagcacagg ggccggtgct cggagcagca gcggtgaggt
     1081 cgccgaagtg atcggaggcc agatgcgcgg cgggcgctat ccgcccgctt tcggaacggg
     1141 atggtcaatc ttctcaatct ccgccgtgaa cagcggattg cccgggaact gctggtgcag
     1201 ttcggcaaac ttcttgcgcg cggcgtcttt gtctttgcgg cgcagatcgt caaaggccag
     1261 caggatacgc gcgtaaggcg ccagataatg acctttctgc gctaccaggc gcagctcttt
     1321 cactccttct tcctgatcac ccttcaatcc gccaagccgc agcatccagc gcaccggcgc
     1381 agccttgccg ccgatgatgt acttgccgag cccggtggcg acgtaagcgt cgtaataatc
     1441 gggatggcga gccagcagtt tttctgcata ctgattaccg gttttggtga atgagagcgc
     1501 tcccatgttc tttttagcga tgagcgcagc atcgtcggcg cgcaggccgc tggccagcgt
     1561 catcacgaaa agtgcccgcg gatcttcagg atcgctcgcg agccgttcct tgcctagctt
     1621 ttccgcgccg ttcagcgcgt cctcaaattg cttgcgattc tgtggaatcc acgcctgctc
     1681 cttccgcgag gagaacttct cgtctgaggt gaacatgtca ctgctgagaa tgtgcaaccg
     1741 gtcaaactca cggaacagcg ctgcgcaggc ctgcgccatc cacggcaacg gatcttcagg
     1801 attgtagcgt ttggcggtct cggccagctt catggcttca tcgaacttta ggttgtacat
     1861 gtccaggaac gcctgatcga gaagcgcatc tgccggagaa gcgttgatgg attgttgggc
     1921 ggcctgcgta gtctgcgcaa acatgcctgt gtcaggcgca agggccaaaa gaataacagt
     1981 gatgatgtga aaagtggtgc gcacccgata aacctatgta gccatgttaa caactggttg
     2041 gatgccagta gaaacccgtt tgtgagcccg aagttgccat ttgggaatac ataacagact
     2101 tctcagttaa acccagcaat cgtatctccg agcagccggc cgtggaagat gggaagaaga
     2161 ttccgcggcc ggcatttttc tttttgcagc aaaggctcca ttggcgggaa taaaaccaca
     2221 ggcttccggt tcttcatgcg taccgcacac agcaaggaga acagagatgg taaagaagca
     2281 cattccccgg acggctgacg agcttttgca cgatcacaat catgatggca ttgaccgacg
     2341 tggctttttg aaatgcatgg catgggccgg taccggcgcg ttttgtgtga tgaagggcgg
     2401 cgtgctccgt tcatacagcc tgagccgcct cgcggagatg gccccgaagg aagcccatgg
     2461 cgagctcagc tttgtgcaga tcagtgacag tcatatgggc ttcgacaagg ccgcaaaccc
     2521 tgacgtggtc gggacgttca aatcggcgat tgaaaagatc aacgcgctgc ctacgccgcc
     2581 gcagttcatc ctgcacaccg gcgatatcac gcacctttcc aagccgcagg agttcgacac
     2641 cgtgcagcag ttgctgcagt cggcgccagc gaaagacgtg ttctacgttc ctggcgagca
     2701 tgacatggtg gacgagggcg cggagttccg tcagcgcttc gggaaaaacg cgcagggcga
     2761 tggctggtac agctttgatc acaagggcgt ccattttgtc gggctggtga acgtggtcaa
     2821 cctgaaggcc ggcgggctgg gcaaccttgg caacgatcaa ctggagtggc tcaagaaaga
     2881 cgtaaagcac ctctccaaaa gcacgccggt tgttgtattc gcgcacatcc ccctttggtc
     2941 ggtctatccg gaatggggat ggggcacgga agacggcgca caggcgcttt catacctcaa
     3001 gcgctttgga tcggtcacgg tgttgaacgg ccatattcac caaactatgc agaaggtgga
     3061 agggaatatc accttccaca ccgctgcatc cactgctttc cctcaaccca agcctggtga
     3121 agctcagtcg cccggaccga tgaaggttcc ggcggatcag ctccggtcgc tacttggagt
     3181 caccgacgtg aaggccgtcc acggaaagca cgcgctggcg gtggtggatt caaccctggg
     3241 ctgagattcg ccccactttg tcgcagaaaa agatttcatg aggagatatg aaaatgaaac
     3301 ttgttgcgtt cagcattgtc gtgatcgccg cgcttaccgc cgcgatcttt gccgcaccgg
     3361 gcgggcagcc cgcggctccc gcagtcacag aagtcaagat cgataacttt agcttcaacc
     3421 ctccggcgat gaaagtgaag gcgggaagca cagtccactg gaccaatcgc gacgacctgc
     3481 cgcacaacgt cgtcgccgag gacaagactt ttcgctccaa ggtgatggac acggacgaac
     3541 agttcagctt cacctttgaa aagccgggga cttactcgta cttttgtggc ctccatccca
     3601 aaatgagagc gacgatcacg gtggagtagc ttcgactaga atggagggcg aggaaggcta
     3661 agtgggcagg caaaatgcag atttcgagag gctggcatta cccctgcttg acccgcttta
     3721 caactacgcc cgctggcttt gcggagatgc cgacgaatcg cgcgacctgg tgcaggagac
     3781 attcaccaaa gccttgaaag gtttttccgg ctttcagccg gggaccaact tccgcgcctg
     3841 gatgttccgc attctccgca acacgtttct taccagccgc gttgggctgg agcggcgcaa
     3901 tacagagcag gaaggcgaag ggggtctgga caacacgcct tccgcgcacg acacgccgga
     3961 gctgctgctc atccgccgtg ccgataccga actggtgcag cagggaattg ccgcgctgga
     4021 cttgcgcttc cgtgaagtgc tgatcctcgc ggatctggaa gagatgaagt
//
LOCUS       DASQYP010000411         5410 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_209738, whole genome shotgun sequence.
ACCESSION   DASQYP010000411 DASQYP010000000
VERSION     DASQYP010000411.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 5410)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5410)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5410
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_209738"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(463..1248)
                     /locus_tag="VE783_13345"
     CDS             complement(463..1248)
                     /locus_tag="VE783_13345"
                     /inference="COORDINATES: protein motif:HMM:NF022750.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3108 domain-containing protein"
                     /protein_id="HYX54436.1"
                     /translation="MLACIALSAAWCAQRIAAQATKTEQPSLSPPAIFKPRPNLPFPI
                     GETWVYTAQWRVFNAGTATLRMESAGRENRVVATADAAGAMAVLFHVQDRLESFFDPA
                     TFCSRSTSRHVEEGFRRVETNITFDYANSKSIFDQKNLKKNDSRHVEHEIPPCVTDML
                     SGIYYVGSQPLEPGKMFSFPLNDGGPTVTINLHVEGREEIKTPAGTFKTIRVQPEAAT
                     GLVRDKGKLWIWYSEDMPRIPVQMRAKLSWGTLTFVLQRIDKK"
     gene            complement(1281..1838)
                     /locus_tag="VE783_13350"
     CDS             complement(1281..1838)
                     /locus_tag="VE783_13350"
                     /EC_number="2.1.1.100"
                     /EC_number="2.1.1.334"
                     /inference="COORDINATES: protein motif:HMM:NF016107.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isoprenylcysteine carboxylmethyltransferase
                     family protein"
                     /protein_id="HYX54437.1"
                     /translation="MPSWSRIATRMRVPLGFLFAAAYLWFARPSWSWIATGAAFIIAG
                     LLLRGAAAGHIRKNRELTTTGPYAYTRNPLYLGSVLIAIGFLIAARNPWIAAASLLMF
                     LFVYLPVIRAEEKYLGATFSNYAEYCANVPRLLPRLSAHNPTGGDVRGSFSRELYLKH
                     REYQAALGSALMLLALVIKIFLVNR"
     gene            complement(1831..2982)
                     /locus_tag="VE783_13355"
     CDS             complement(1831..2982)
                     /locus_tag="VE783_13355"
                     /inference="COORDINATES: protein motif:HMM:NF013257.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 9 protein"
                     /protein_id="HYX54438.1"
                     /translation="MRILILRLGALGDILHALPAVTAIRHTLPDATIGWLVEEKWSEL
                     LTAHGHKDTPEAITAQKPVANLIHTVNTARWRKDLLSSKTIREIRGDLARLRSVHYEL
                     AIDFQGNAKSAIFGKLSRASRRAGYVDPRESVARFFYTQRFPRAGEHVIVQNHAMAVL
                     ALKEALGANSNDLKHTGLKFTELKFTETKFTEPKLTEPKLTAPELPHDSAAEAWADAE
                     LRRLGVASFAMVTPGAGWGGKQWPPERFGQVAAGLAKHNLRTLVNCGPGEQALAQAVI
                     DSSGGAAMKVTATISQLIAITRRCRLFIGGDTGPLHIAASLQVPVVGIYGPTSPARTG
                     PFGTRAIVLRHPESETTFSHHASPDSGMLKITADEVLRAARQLLGGAHA"
     gene            complement(2970..3431)
                     /locus_tag="VE783_13360"
     CDS             complement(2970..3431)
                     /locus_tag="VE783_13360"
                     /inference="COORDINATES: protein motif:HMM:NF013621.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylyltransferase/cytidyltransferase family
                     protein"
                     /protein_id="HYX54439.1"
                     /translation="MTAEELARQAAAWRSAGEKITLTNGCFDLLHVGHVRYLRAAKEL
                     GGKLVVAVNSDASTRALKGAGRPRVPDHERAELLAALADVDAVTIFNAPDVREIIRLI
                     RPDVHAKGTDYTAESVPERDVVVACGGRVAIVGDPKDHSTSEMLRKDECES"
     gene            complement(3457..4470)
                     /locus_tag="VE783_13365"
     CDS             complement(3457..4470)
                     /locus_tag="VE783_13365"
                     /inference="COORDINATES: protein motif:HMM:NF012515.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PfkB family carbohydrate kinase"
                     /protein_id="HYX54440.1"
                     /translation="MLKNSKPADRLVRIIEDFSKLTITVLGDLIADEFIYGEITRVSR
                     EAPVLILKHRERTVVPGGAGNAIYNLADLGVTVLPVGVVGEDEPGRMLLHAFRQKHIS
                     ITGIRRIKGRSTVTKTRVLAGTTHSPRQQVIRVDREPETPLDRSAMRDLVYQTRGYIR
                     ASDALLISDYGYGSATPQLFDVIRSRAALKEIPVTLDSRYRTLDYNGITAATPNEAEL
                     EDALRTRIGNDNERLMDAGKAILNRMKLQSLLVTRGRDGMVVFRRGEKPVSIPIHGSD
                     EVADVTGAGDTVIATYTAALATGADPESAARLANYAGGIVVMKRGTATVSRAELLRAV
                     VEG"
     gene            complement(4540..>5410)
                     /gene="lpxK"
                     /locus_tag="VE783_13370"
     CDS             complement(4540..>5410)
                     /gene="lpxK"
                     /locus_tag="VE783_13370"
                     /EC_number="2.7.1.130"
                     /inference="COORDINATES: protein motif:HMM:NF014645.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009029 - tetraacyldisaccharide 4'-kinase
                     activity [Evidence IEA];
                     GO_process: GO:0009245 - lipid A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="tetraacyldisaccharide 4'-kinase"
                     /protein_id="HYX54441.1"
                     /translation="LAMRRLALPVVSVGNISVGGSGKTPFVIALGRLLKERGIAFDVL
                     SRGYGRRSTKVAVVDPHGSPADFGDEPLLIARSLEVPVIVGAERYEAGILAEAKFNTQ
                     LHLLDDGFQHRRLHRDFDIVMLPASDLEDSLLPTGRLREPLATLVRADAVASADDLAG
                     LPIASKLKRLWKVSRQMRLNGEVTNAIVFCGIARPQQFFSPLAAAGITLAQTVSFGDH
                     HRYREPDIVRLLKLKSKTGANAFMTTEKDEINLGGLAEKLQPLHVARLEMTFENPDAV
                     IRELLPELNITSA"
BASE COUNT         1109 a         1657 c         1556 g         1088 t
ORIGIN      
        1 gtgatgtagc gaagttggcg gagagcgcgc cgattacttt cagcgacgtc ttttaaggtt
       61 tgttttccgg attacttctg ggtaccagaa gcggtcttat agatgactgg tcggtgaaga
      121 aggtttgtag cacaggcgcc ctcgcctgtg ccgcaagaat gacaatctgc gccgcaagtt
      181 gccgcatatt caaaaagacg gcggttcatg cttcatcaaa ttccatacaa gagacggtct
      241 gaccttgaat gatgaagaag gagtggccct cggccattat tcgtatgacg acggcaagcg
      301 ctacgaatcg gacttcggtg gcgagtaagc cggcacaggc gagggcgcct gtgctacaca
      361 gtcaacaaga gctacattca gagggaagag cgaactcgcc cggccaacaa ttaacagggg
      421 ggagctgtca gcctgtttaa ctcaccagga gatggcttta ggctacttct tgtcgatacg
      481 ttgcagcacg aacgtcagcg tgccccagct cagcttggcc cgcatctgta ccggaatcct
      541 cggcatatct tccgaatacc agatccacag tttgccttta tcgcgcacca gcccggtagc
      601 agcctccggc tgaacgcgga tagtcttgaa agtgccggca ggcgtcttga tctcttctcg
      661 tccttccacg tgcaggttga tggtgaccgt gggaccgcca tcattcaagg ggaagctgaa
      721 catcttgccc ggctccagcg gttgtgatcc cacgtagtag atcccggaaa gcatgtccgt
      781 gacgcagggc ggaatctcat gctccacgtg tctggaatca ttcttcttca ggttcttctg
      841 gtcgaagatt gacttggagt tcgcgtaatc gaaggtgata ttcgtttcca cgcgcctgaa
      901 tccttcttcc acgtggcgcg atgtgctgcg ggagcagaac gtagccggat cgaagaacga
      961 ttccagccgg tcctgcacgt gaaacagcac ggccatcgct ccggccgcgt cagccgtggc
     1021 cacaacccgg ttctcgcgtc ctgcagattc catccgcagc gtcgctgtac cggcattgaa
     1081 cacgcgccat tgtgccgtgt aaacccacgt ttcgccaatc gggaatggca ggttggggcg
     1141 cggtttgaag attgcaggag gggaaagcga gggctgctcc gtcttggtgg cttgagcagc
     1201 gatcctttgc gcacaccaag ccgcgctcag cgcgatgcac gccagcattg cccactggat
     1261 gtaactccgg aggggcgctc tcaacgattc accagaaaaa ttttaatgac caaagccaat
     1321 aacattaaag cagaacccag cgctgcctgg tactcgcgat gttttaggta tagctcgcgt
     1381 gagaagctgc cacggacatc tccgccggta ggattgtggg ctgaaagccg cggcagcagg
     1441 cgcggcacgt tggcgcaata ctctgcatag ttgctgaacg tcgctcccag gtatttctct
     1501 tccgcgcgta tcaccggcag atagacgaac agaaacatca gcagagatgc cgcggcaatc
     1561 cacggattgc gcgccgcgat cagaaagccg atcgcaatca acactgagcc aagataaaga
     1621 ggattgcgcg tgtaggcgta agggcccgtg gtggtgagct cgcggttctt gcggatgtgt
     1681 ccggcggccg cgccgcgcag aagcagaccg gcaatgatga aggctgctcc ggtggcgatc
     1741 caactccagc tcggccgcgc gaaccagaga taagccgccg caaacaggaa tccaaggggc
     1801 acgcgcatgc gtgtggcgat tcgcgaccag ctaggcatgc gcgcctccca gcagttgccg
     1861 cgccgcgcgc agcacttcat ccgcggtaat cttcagcatg cctgagtcag ggctcgcatg
     1921 atgggaaaaa gtggtctcac tctctggatg tcgcaaaaca atagcgcgcg ttccaaacgg
     1981 gccggtgcgc gccggactgg taggcccata gataccgacc acaggaacct ggagcgacgc
     2041 cgcgatatgc agcggcccgg tgtcgccgcc aatgaaaagc ctgcaacggc gcgtgattgc
     2101 gatgagctgg ctgatcgtgg cggtcacctt catcgcagct ccgccgctgg aatcgatcac
     2161 agcctgggca agcgcttgtt ctcctgggcc gcaattcacc agcgtgcgta gattgtgctt
     2221 tgccagcccg gccgcaacct gtccaaagcg ctccggcggc cactgcttgc ctccccagcc
     2281 ggcgcctgga gtgaccatcg caaagcttgc cacgccaagg cggcgcagct cagcgtcggc
     2341 ccatgcttct gccgcgctat cgtgaggaag ctctggggca gtgagcttgg gttcagtgag
     2401 cttgggttca gtgaacttgg tttcagtgaa cttgagttca gtgaacttaa gcccggtgtg
     2461 cttaagatca ttgctattgg cgccgagtgc ttctttcaga gccagcaccg ccatggcatg
     2521 attttgcaca attacgtgct cgcccgcgcg gggaaatcgc tgcgtataaa agaaccgtgc
     2581 aaccgattcg cgtggatcaa cgtatccggc ccgccgcgaa gcacggctca gcttgccaaa
     2641 gattgccgac ttggcattgc cctgaaagtc gattgccagc tcgtagtgca ccgagcggag
     2701 ccgggccaga tcaccgcgta tttcgcgaat ggtcttgctg ctcagcagat ccttccgcca
     2761 tcgcgcagtg ttcacggtgt ggatcaggtt cgccaccggc ttctgcgcgg taatcgcctc
     2821 aggcgtatct ttgtggccgt gcgcagtcag taactctgac catttttctt ccaccagcca
     2881 cccaattgtt gcgtccggca gcgtgtgacg gatggcggta actgcgggca aggcgtgcag
     2941 aatgtcaccc agggcgccaa ggcgcaggat caggattcgc attcgtcctt tcgcagcatc
     3001 tcggaagtcg aatggtcctt gggatcgccc acgatcgcca cccgcccgcc gcacgcaaca
     3061 acaacgtcgc gttccggcac cgattcggcc gtatagtccg ttcctttggc gtgaacgtca
     3121 ggacgaatca ggcgaatgat ctcgcgcaca tccggagcgt taaaaatggt caccgcatcc
     3181 acgtcagcca gtgccgccag caattccgcc cgctcgtgat cgggaacccg cggacgaccc
     3241 gcacccttga gcgcgcgcgt gctggcatca gaattcaccg cgactaccag cttgccgccg
     3301 agttcctttg cggcacgcag atatctcaca tggcccacgt gcagcagatc aaagcagccg
     3361 ttcgtcaagg tgatcttttc acccgcagag cgccacgctg ccgcttggcg cgccagctct
     3421 tccgcagtca caactttttt gagctgctga ggcagatcag ccctccacca cggcgcgcag
     3481 caactccgcc cggcttaccg ttgcggtgcc gcgcttcatc accacgatcc cgccggcgta
     3541 gttggcaagc cgcgccgctg actccgggtc agcgcctgtg gccagcgctg cggtataggt
     3601 tgcgatcaca gtatcgcccg cgcccgtcac atcggctact tcatcacttc catggatcgg
     3661 gatagaaacc ggcttttctc cgcgacggaa caccaccatt ccatcacgcc cacgcgtcac
     3721 caacagtgac tgcagcttca tcctgttcag gatcgccttg cccgcatcca tcagccgctc
     3781 attgtcattg ccgatgcgcg tgcgcagcgc atcttccaac tcggcttcat tcggggtagc
     3841 ggccgtgatg ccgttgtagt ccagcgttcg atagcgcgag tccagcgtga ccggaatctc
     3901 tttcagcgcg gcgcgcgagc ggatcacgtc gaagagctgc ggtgtcgcgg aaccatagcc
     3961 gtagtccgag atcagcagcg catcggacgc gcgaatgtag ccgcgcgtct ggtaaacaag
     4021 gtcgcgcatg gcggagcggt ccagaggcgt ctcaggctct cgatctaccc gaataacctg
     4081 ctggcgcggc gagtgtgtgg tccctgccag cacgcgggtt ttcgtcacgg tgctgcggcc
     4141 tttgatgcgg cgaattccgg tgatcgaaat gtgcttctgc cggaatgcat gcagcagcat
     4201 gcgtccgggc tcgtcttcgc ccaccacacc caccggcaac accgtcacgc ccaggtcggc
     4261 aagattgtag atcgcgttac ccgcgccgcc cggcaccacc gtgcgttcac gatgtttcag
     4321 gatcaacacc ggcgcttcgc gggatactcg cgtgatttcg ccgtagatga actcatccgc
     4381 aatcagatcg cccagcacgg tgatcgtcag cttggaaaag tcctcaataa tgcgaaccag
     4441 gcggtctgcc ggtttggaat tcttcagcat gggtgaacag aaattctctc acgagtgggc
     4501 gctaagcggc aggcacaggt tggttctcca gcgatgccgt caggcggacg tgatgttgag
     4561 ctccggtaga agctcccgta tcacggcatc aggattttcg aacgtcatct ccagccgcgc
     4621 gacatgcaac ggctggagct tctcggccag cccacccagg ttgatctcgt ctttttccgt
     4681 tgtcatgaac gcattggcgc cggttttgct cttcagcttc agcagccgaa caatgtccgg
     4741 ctcccgatac cggtgatggt cgccaaacga aactgtttgt gcgagtgtta tacctgccgc
     4801 ggccagcggc gaaaagaatt gctgcggccg cgcgatcccg caaaatacaa tcgcattggt
     4861 tacctcgcca ttcagccgca tttggcggct cactttccag agccgcttca gctttgaagc
     4921 gatcggcaaa cccgcaagat catcggccga cgccacggca tcagcgcgca ccagcgtagc
     4981 caaaggttcg cgaagccgtc ccgtcggaag cagcgaatcc tcaaggtccg atgcaggcag
     5041 catcacgata tcgaaatcac gatgcaggcg gcgatgctgg aaaccatcat ccagcaaatg
     5101 gagctgcgtg ttgaacttcg cttccgccag tatgccggcc tcgtatcgct ccgcgcccac
     5161 aatcaccggg acttccagtg agcgtgcgat cagcaaaggc tcatcaccaa aatcggctgg
     5221 cgaaccgtgc ggatccacca ctgcgacttt agttgacctg cggccgtaac cgcgcgagag
     5281 cacgtcaaaa gcgatgccac gctctttgag cagcctccca agggcgataa caaaaggcgt
     5341 cttgccgctg ccgccaacag aaatgttccc cacgcttacc accgggagag ccagcctgcg
     5401 catcgccagg
//
LOCUS       DASQYP010000412         6822 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_210057, whole genome shotgun sequence.
ACCESSION   DASQYP010000412 DASQYP010000000
VERSION     DASQYP010000412.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 6822)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6822)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6822
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_210057"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2379
                     /locus_tag="VE783_13375"
     CDS             <1..2379
                     /locus_tag="VE783_13375"
                     /inference="COORDINATES: protein motif:HMM:NF013069.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HYX54442.1"
                     /translation="RLKDIARIELGALNYQQIARMNGKPTCVIAVFQSPGSNAIAVAN
                     GINAVMNQMKQRFPADLDFVTSLDTTRPVREGIKDIVVTLSEAMVLVIFVVYLFLQNW
                     RATLIPMIAVPVSLIGVFAFFPFLNFSINTLSLFGLVLAIGLVVDDAIVVVEAVEHHI
                     EEGMKPREATLQAMKEVSGPVIGIALILSSVFIPIAFMSGIQGRLNKQFAVTIALSVL
                     ISAFNALTLSPALSALLLKPRKKSTGPLGRFFGLFNRWFQKGTDAYTTLSHGVIRKAI
                     IAILVLGAFAAVDGLIGRKLPTSFLPEEDYGYFLVNAQLPPAASLARTDQVSQKIENI
                     LAKTEGVQYGTRVAGFSLLSRVSSSYNTFFFVALKPWDERSSGKLGAREILDRLNKQL
                     ASDVPEANAFAFMPAAIPGLGNAGGFSFWLQDRGGNSIDYLDQNLKKFLAEARKRPEL
                     QGVNAQFSTAVPQYFIDVDRDKVLQQGVALSDVYQTLQAFLGGQFVNQFNRFGRQWRV
                     FIEAEGQERAHPEDINQYYVRSSKGGMVPLSTLVTSKPVTGPEYTNRFNLYRAAQVLG
                     NAAPGYSSGQAMQALEDVARQTLPADMGFDWADLSYQERKAAGTAGPIFGLSLLLVFL
                     ILAALYESWALPFSVLLSVPIAVFGAFLGLQLRHYDLDVYAQIGLIMLIGLSAKNAIL
                     IVEFAKLEYEKGRDLVEAALAGAKLRLRPILMTSFAFILGCVPLWFAAGSGAAGRRIL
                     GTVVITGMLAATLLAIFIIPMLFVVVEKIAARLSRKVHAREVALPAPSGADD"
     gene            2416..3825
                     /locus_tag="VE783_13380"
     CDS             2416..3825
                     /locus_tag="VE783_13380"
                     /inference="COORDINATES: protein motif:HMM:TIGR01845.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA];
                     GO_function: GO:0015288 - porin activity [Evidence IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux transporter outer membrane subunit"
                     /protein_id="HYX54443.1"
                     /translation="MKKVPLFLLLCVVATGCTVGPRYKRPAVDVPTVYRDAETAAAQP
                     PGQQTASSASLAGQKWWQVFQDQQLQQLIRTALEQNYDVRIAAARILEAQAQLGITRS
                     NQFPQVSAGASGSLQRTPKESVLPPINSDVAQVSASAVWELDFWGRLRKATEAARANL
                     LASEWARQQVISTLVADVASSYFQLRELDLELDISKRTLTSRQDSLKLTELLANGGAT
                     SMLDVYQAEQLVYTAGEQIPDLERRIRQQENFLSTLMGRNPGDIKRGLTLTEQPHMPQ
                     VPSGLPSELLERRPDIRQAEQQLIAFNAQIGVARAAYFPQITLTGDGGFQSSALTSLF
                     SGPAGFFGAGAQLAQPIFTGGRLRNGVRLAEAQEKEAALVYENTVQQAFRDVSDQLVA
                     YSKNQEFRHQQELLTKAAENAAQLSDIRYKGGAASYLEVLTNQTNYFTAELNLSQAQF
                     NELNSLVQLYRALGGGWQQ"
     gene            4151..5785
                     /locus_tag="VE783_13385"
     CDS             4151..5785
                     /locus_tag="VE783_13385"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX54444.1"
                     /translation="MKSLKTFFVVVLIAGLAAGQTSVAPNSAPEQSGSQNVTEILQKL
                     QEKMAEQQKQIAAQQQEIEKLRQQVTAKPVSAANSNSIAEPQLVNASLTTTKTSNTPD
                     VQSDADKVKESPLSFRIGGADFTPGGFMDMTAYWRNSNPGSGYGTNFFSIPYHNTIPG
                     QLSETRLTGENSRISMKAASKYKGNNVTGYFEMDFHGNDPANAFVTSNSHTNRIRLYW
                     VDVRHDKWEVLGGQSWSWLTPNRVGLSPNPSDIFYSQNTDANYQAGLTWTRAAQVRVA
                     YHPNDNWGFGVALETPDQFIGQTNQVVLPAGLAGTVATQFDAANQTSTPNVMPDIVPK
                     IAYDTKIGGKAYHIEAAGLLTSARVLPALNGSTDTKWGGGGSVNMNLEIFKGFRLIAS
                     SFASDGGGRYIFGSGPQAVITPQGTVSFLHSYSGIGGFEYQVSPKLLLAGYYGGDYFQ
                     RNFFLDTSAGAKPNTFVGYGAPGVANANALAANRAIQEPTFDFIYTFWKNPQYGALQI
                     NNQISYLTRAPWVVPAGQPKNARSTMVWSNLRYVLP"
     gene            6123..>6822
                     /locus_tag="VE783_13390"
     CDS             6123..>6822
                     /locus_tag="VE783_13390"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX54445.1"
                     /translation="MLKFLKSLFVVLLIAGLASGQTSVTTSAAAEQPGPQNVNEILQK
                     LQEKMAQQQKAMEEQQKALEQQQKQIAAQQQELDRLRGQVTATPAAAMNSMAAPQVIN
                     ASLNTTTVSNTPVVQSDAEKVKESPLSFRIGGADFTPGGFMDFTTIFRTTNTGNLGTN
                     FFAIPFSPTVQAHLTETRMTAQNSRISMKAASKFGKNDVTGYYEMDFLGNDATNVFVT
                     SNSHTVRQRLFWVDV"
BASE COUNT         1482 a         1951 c         1896 g         1493 t
ORIGIN      
        1 cgccttaagg atattgcgcg cattgaattg ggcgcgctca actaccagca gatcgcgcgc
       61 atgaacggca agcccacgtg cgtcattgcc gtcttccagt cgcctggatc aaacgcgatt
      121 gccgtcgcca acggcatcaa cgcggtgatg aaccagatga agcagcgctt tcccgctgat
      181 ctggatttcg tgacttcgct cgataccacg cgcccggttc gcgaagggat caaggacatt
      241 gtggtcacgc tctctgaagc gatggtactg gtcatcttcg tggtgtactt gttcctgcag
      301 aactggcgcg ccacgctcat ccccatgatc gccgtaccgg tttcgctgat cggcgtgttt
      361 gcattcttcc cgttcctgaa tttctccatc aacacgcttt cgctgttcgg gttggtgctg
      421 gcgattggac tggtggttga cgacgccatt gtggtcgtag aagccgtgga gcaccatatt
      481 gaggaaggca tgaagccgcg ggaagcgacg cttcaggcga tgaaagaggt atcgggcccg
      541 gtcatcggta tcgccctgat cctttcctcc gtgttcatcc ccattgcgtt catgagcggc
      601 attcaaggga gacttaacaa gcagttcgcc gtcacgatcg cactctcggt gctgatttca
      661 gcgttcaacg cccttacgct ctcgccggct ttgtcggcgc tcttgcttaa gccgaggaag
      721 aaatccactg ggcctttggg acgtttcttt ggactgttca accgctggtt ccagaaggga
      781 actgatgctt acaccacgct gagccacggt gtcatccgca aggcgatcat tgccattctg
      841 gtgcttggtg cttttgctgc cgttgacggg ttgattgggc gcaagctgcc caccagcttc
      901 ctgccggaag aagattacgg atacttcctg gtcaatgcgc agttaccgcc ggcagcctcg
      961 ctggctcgta cggaccaggt ttcacagaag attgaaaaca ttcttgccaa aactgaaggc
     1021 gtgcagtacg gaacgcgcgt ggccggattc agcctgctct cgcgcgtgag ctcgtcatat
     1081 aacacctttt tcttcgtagc cctcaagccg tgggatgagc gcagttcggg caaactgggc
     1141 gctcgtgaga ttcttgatcg cctgaacaag cagctcgctt cggatgttcc tgaagcgaac
     1201 gcatttgctt tcatgccggc ggcaattccc ggactgggca atgccggcgg attttcattc
     1261 tggctccagg accgtggtgg aaattccatt gactaccttg accagaatct caagaagttt
     1321 ctggcggaag cacgcaagcg gcctgagttg cagggcgtga atgcccagtt ctccaccgcc
     1381 gtgccgcagt actttattga tgttgaccgt gacaaagtgc tgcagcaggg cgttgcactc
     1441 agtgacgtct accagacgct gcaggcattc cttggcgggc agttcgtcaa ccagttcaat
     1501 cgcttcggcc ggcagtggcg agttttcatt gaggccgaag gacaagagcg tgctcatccg
     1561 gaagacataa accagtacta tgtccgcagc agcaaaggtg gcatggttcc gctttccacg
     1621 ctggtcacga gcaagccggt caccggccct gagtacacga acagattcaa cctctatcgc
     1681 gctgcgcagg tcctgggcaa cgccgctcct ggctacagct ctggacaggc gatgcaggcg
     1741 ctcgaagatg ttgcgcgtca gaccctgccc gctgacatgg gttttgactg ggccgatctt
     1801 tcttatcagg aaagaaaagc tgccggcacg gctgggccca tcttcggtct gtcactgctg
     1861 ttggtcttcc tgattttggc ggctctgtat gaaagctggg ccctgccgtt ttccgtcctg
     1921 ctctcggtac ccattgcggt gttcggcgcg ttcctcggct tgcagctacg ccactacgat
     1981 ctggatgtgt acgcgcagat cgggctgatc atgctgattg gtttgtcagc caagaacgcg
     2041 atcttgatcg tggagttcgc gaagctggag tacgaaaaag gtcgcgatct ggtggaggcc
     2101 gcgctggctg gagccaagct gaggctgcgc ccaatcctga tgacctcatt tgccttcatt
     2161 ctcggctgtg tccctttgtg gtttgcagcg ggttcaggcg cagcaggaag acggattctg
     2221 ggcacggtgg tgattaccgg catgcttgcc gccacactgc tcgccatctt catcatcccc
     2281 atgttgttcg tagtggtgga aaaaattgct gcgcggttga gccggaaggt acacgcgaga
     2341 gaagttgctt tgcccgcacc cagcggagcg gatgactaat caacggatcg attgcaagat
     2401 cgaatgaaaa gattgatgaa aaaagtccct ctattcttat tactttgtgt tgttgcaacg
     2461 ggctgcacgg ttggtccacg ctacaagcgg ccagccgtgg atgtgcccac ggtgtatcgc
     2521 gatgcggaga ccgctgcagc gcaaccgcct ggacaacaaa ctgccagttc cgcttcgctc
     2581 gctggacaga agtggtggca ggtttttcag gaccagcaac tgcagcaact catccgcact
     2641 gcgctggaac agaattacga cgtgcgcatc gcagccgcac ggattcttga ggcgcaggcg
     2701 cagcttggca tcacgcgttc gaatcagttt cctcaggtct ccgccggggc ttccggctct
     2761 cttcagcgaa caccgaagga atcggttctg cccccgatta atagtgacgt ggctcaggtg
     2821 agcgcatcgg ctgtgtggga actcgacttc tggggcaggc tgcgcaaggc caccgaagct
     2881 gcccgcgcca acctgctcgc cagcgagtgg gcgcggcagc aggtgatcag cacgctggta
     2941 gccgatgttg cttcatccta ttttcagctc cgtgaactcg atcttgagct cgacatttcg
     3001 aaaagaacgc tgacttcgcg gcaggattca cttaagctca ccgaactgct cgccaacggt
     3061 ggcgccactt ccatgctgga tgtttaccag gcggagcagc ttgtgtacac ggcgggcgag
     3121 cagattcctg accttgagcg acgcattcgc cagcaggaaa attttctgag cacgctgatg
     3181 ggcaggaatc cgggcgacat taagcgtggt ctcacgctga ccgagcagcc gcacatgccg
     3241 caggttccct ccgggctgcc ttccgaactc ctcgagcgcc ggccagacat tcgccaggct
     3301 gaacagcaat tgatcgcctt taatgcgcag atcggggtgg cgcgcgcggc atactttccg
     3361 cagattacgc ttaccggcga cggcggcttt cagagctcag ctctcacctc actcttcagc
     3421 gggcctgcgg gattttttgg tgcaggcgcg cagctggcgc agcccatttt tactggcggg
     3481 cgactgcgca acggcgtgcg tcttgcagag gcgcaggaaa aagaagctgc tctggtctat
     3541 gagaataccg tacagcaggc gtttcgtgac gtttccgatc agctcgtcgc ttacagcaag
     3601 aaccaggaat tcaggcatca gcaggaactt ctgaccaaag ccgccgagaa tgcagcgcag
     3661 ctctcagata ttcgatataa aggcggcgcg gccagctatc ttgaggtcct caccaaccag
     3721 accaactatt tcaccgcaga gctcaatctc tcgcaggcac agttcaatga gctcaactca
     3781 ttggtacagc tttatcgtgc gctgggaggc ggctggcagc agtagtagca cttcacgcca
     3841 ctgaccgatg gtcgtcagtt ttgatgtatg aatttgcgga aataatcctg acagttcctg
     3901 ctgaattcca aatttttgga taatctttcg ggcttgcctg aattatgggg cagctttctc
     3961 ttttgttcct ctcggccggg gcttttcatc tgcttttaac atcccgttca tctgcctttc
     4021 acttcgctgc ttcagtctag cgtttcgcaa cgcgcacaac agccgcagtt gtcagacttt
     4081 gtaagaaggg cacatgcctg ccgtactaat acgcacgaaa tcagagcaag cagatgaagg
     4141 gagacacgga gtgaaatcgc tgaaaacatt ttttgttgtc gtgctgattg cgggtttggc
     4201 tgctggccag accagcgtcg cccccaacag cgctccagag cagtccgggt cgcagaacgt
     4261 aactgaaatc ctgcagaagc tgcaggaaaa aatggctgag cagcagaagc agatcgccgc
     4321 ccagcagcag gagatcgaga agctgcggca gcaggtgact gcgaaaccgg tttcggccgc
     4381 gaactcgaat tccattgctg agccgcaatt ggtgaacgcc tcgctcacca ccaccaagac
     4441 ctccaacacg cccgacgttc agagcgatgc tgacaaggta aaagagtcgc cgctttcctt
     4501 ccgtatcggt ggcgctgatt tcacccctgg cggcttcatg gatatgactg cctactggcg
     4561 caactccaac ccgggttcgg gatacggcac caacttcttc tccatcccat atcacaatac
     4621 aattcccggt cagctctctg agacgcgcct cacgggcgaa aactcccgca tcagcatgaa
     4681 ggccgcgagc aagtacaaag gtaacaacgt taccggatac ttcgagatgg acttccatgg
     4741 caatgatccg gcaaacgcct tcgtaaccag caacagccac accaaccgta tccgtcttta
     4801 ctgggtggat gtacggcatg acaagtggga agtcctgggc ggccaatcct ggagctggct
     4861 gacgccaaac cgagtgggcc tctcgccgaa tccttccgat atcttctaca gccagaacac
     4921 ggatgcgaac taccaagccg gtctcacctg gacccgcgct gcacaggtcc gcgtagctta
     4981 tcacccgaac gacaactggg gttttggagt tgcgctggaa acacccgatc agttcatcgg
     5041 ccagaccaac caggtggttc tgcccgccgg cctggcagga acagtcgcta cgcagtttga
     5101 tgctgccaat cagacgagca cgcccaacgt gatgcccgat atcgttccga agattgcgta
     5161 cgacaccaag atcggcggca aggcatacca tattgaagca gccgggttgc tcacgtcagc
     5221 acgagtcctc cctgctctca acggatccac tgataccaaa tggggtggcg gcgggtccgt
     5281 gaacatgaac ctggaaatct tcaaaggctt ccggctgatc gcaagctcct tcgccagtga
     5341 cggcggcggc cgttatatct tcggcagcgg tccgcaggcc gtgattactc cacagggaac
     5401 cgtttcgttc cttcactcct actccggcat tggcggtttc gaatatcagg tcagtccgaa
     5461 gctgctgttg gccgggtact atggcggaga ttacttccag cgtaatttct tcctggatac
     5521 cagcgccggc gccaagccga ataccttcgt gggatatggc gctccgggcg ttgctaacgc
     5581 gaacgcgctt gcagcaaacc gcgcaatcca ggaacctacg tttgatttca tctacacgtt
     5641 ctggaagaat ccgcagtacg gagctctcca gatcaacaac cagatcagct atcttacccg
     5701 tgctccctgg gtagttccgg ctggtcaacc caagaatgcg cgcagcacca tggtgtggag
     5761 caatttgcgt tacgtgttgc cgtaaacagt ttcaattcaa acgtacgaga atggaccggg
     5821 aaatccccgg tccatttttt ttttggagcc aagatcatcc cgcgctgccc ggggtaccag
     5881 aacaggcact gaggtgcgga aggcgtaatt catcttctct tgacacaggg cgaaagcctg
     5941 ccatagtgat acgaacaagc tcaaactgtg attgcgatcc ggggactgaa ctcccgtcag
     6001 ccactacgga tctatgaatg tgaggcaaaa tcgcatgatc tgcatgcgat gtgtacccgc
     6061 ttcacagggc ccctgggata cccagcaaca tctttcaaga atctgcagaa ggagatatgg
     6121 gcgtgctgaa attcctgaaa tcactatttg ttgtcctgct cattgcgggg ctggcatcgg
     6181 gccagaccag cgttacaacc agcgcagctg cggagcaacc cgggccgcaa aacgtcaatg
     6241 aaatcctgca gaagctgcag gagaaaatgg cccagcagca aaaggcaatg gaggagcagc
     6301 agaaggcgct ggagcagcag cagaaacaga tagcagctca gcaacaggag ctcgacaggc
     6361 ttagagggca ggtaactgcc acgcccgctg cggccatgaa ctcgatggcg gcccctcaag
     6421 tgattaacgc ttcactgaac accacgaccg tatccaacac gcccgtggtg cagagcgatg
     6481 cagaaaaggt aaaggaatcg ccgctgtcat tccgcatcgg cggagcggac ttcacgcccg
     6541 gcggtttcat ggactttaca actatcttcc gcaccaccaa cacgggcaac ctgggaacta
     6601 acttcttcgc cattcccttc agcccgactg tgcaggcaca tctgacggaa acgcgcatga
     6661 ccgcccagaa ctcgcgcatc agcatgaagg cggccagcaa gtttggcaag aatgacgtga
     6721 ccggctatta cgagatggac tttttaggta acgatgccac gaacgtcttt gttaccagca
     6781 acagtcacac agtccgtcag cgcttgttct gggtcgacgt ga
//
LOCUS       DASQYP010000413         9386 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_145498, whole genome shotgun sequence.
ACCESSION   DASQYP010000413 DASQYP010000000
VERSION     DASQYP010000413.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 9386)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9386)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9386
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_145498"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..358)
                     /locus_tag="VE783_13395"
     CDS             complement(<1..358)
                     /locus_tag="VE783_13395"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX54446.1"
                     /translation="MKAAIVPLRSLILLLAFPAFASLAHGQSQPAPAHETSSPSPSAQ
                     SDRADSVPTRKIKIAGIYFFGYEKDGIDLSPIRTALPVHEGDELLIDGIPSLRSKTSE
                     AVQKVEGNPPTDTAAVC"
     gene            complement(389..1132)
                     /locus_tag="VE783_13400"
     CDS             complement(389..1132)
                     /locus_tag="VE783_13400"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX54447.1"
                     /translation="MKLTRAALLLILTAAIPAMLMASDQKDKKAATNGKKIWDSGSFS
                     IFMNGKKIGNEKFSIEQRSDVSVATSEIKVDDGSFKADQTAEMQITPKGELKSYSWRA
                     TAPTKEESLVEPKEQLLVEHVTPSDQKKIDVPHILPLSTVILDDNFFSHRELLVWRYL
                     STGCVQDKNGLMCGPSHFGILVPRQHLAAEAVVDLLGREKITIKGQEQELNKLKMQTD
                     STVWLLWVSDDYKVLKMSIPTQNVEVVRD"
     gene            complement(1129..1677)
                     /locus_tag="VE783_13405"
     CDS             complement(1129..1677)
                     /locus_tag="VE783_13405"
                     /EC_number="2.7.1.71"
                     /inference="COORDINATES: protein motif:HMM:NF013375.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0004765 - shikimate kinase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0008652 - amino acid biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0009073 - aromatic amino acid family
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="shikimate kinase"
                     /protein_id="HYX54448.1"
                     /translation="MPSAASIRRVFLIGFMGAGKTSAGKALAAHLGWRFQDLDDLIEA
                     REGARIATLFTERGEAGFRDAEAQALEHLLQDAASQSDLVVALGGGTFVQPRNRVLLE
                     RYGAVTVLLDAPAEELRRRCQAEDRIRPLAGDEERFLELYVERQPAYARARHKVQTMN
                     KTVKAVAAEIAELLSSRLEVKK"
     gene            complement(1716..2606)
                     /locus_tag="VE783_13410"
     CDS             complement(1716..2606)
                     /locus_tag="VE783_13410"
                     /inference="COORDINATES: protein motif:HMM:NF024743.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4097 family beta strand repeat-containing
                     protein"
                     /protein_id="HYX54449.1"
                     /translation="MKKISVSLTNLSTATVLGVLTMASICAAAQAQSSSARKEAHLDL
                     AAGGAVTIVNNFGSINLKSDSGHQVVIAYTAHSDKIEVDQQVTPDKRRVEIRAHAIGD
                     QKPTADEARVDLDVMVPAGTSVTVNSSTAPITADAANGDLSLFSDTGHITVQNVARSH
                     VQIQTVGGPVALNNVSGHVDVSTSGGAVQLSQVNGTKVKVGTGSGNITYKGDCSGGGT
                     YAFRTHSGNIDMTLPQTASVDLTASSRSGQVENDFPLQTKTHPVFVPKGGRSFAGTSN
                     SGSSSVELQSFSGRIRVKKQ"
     gene            complement(2633..3283)
                     /locus_tag="VE783_13415"
     CDS             complement(2633..3283)
                     /locus_tag="VE783_13415"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX54450.1"
                     /translation="MNCQQFQEVLPYIIENGGNEEEEAHLRGCRSCSELVRDLKYIAE
                     QAKLLLPMHDPNPRVWGNIEQSLQREGLLKEGRSSRLGHITNYSTSQAQTKTSTPVGW
                     ILATAAALAFSALLVFYRPQLPSTPQSAQNSNVPSAQIQADDTDDQQLIAAVSQDSPE
                     VRTAYENGLREVNAYITDAQQAVNSDPQDTAAQQQLLEAYQQKDMLYQMAAARSLP"
     gene            complement(3335..3937)
                     /locus_tag="VE783_13420"
     CDS             complement(3335..3937)
                     /locus_tag="VE783_13420"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HYX54451.1"
                     /translation="MTQAKKITASGISEAEAIERAKGGDAESFEALYGLHKRRVYSLC
                     LRMTGNTAEAEDLTQEAFLQLYRKIATFRGESAFSTWLHRLAVNVVLMHLRKKGLPEV
                     SLDEALEPQHEDGPKKDIGARDNVLAGSIDRVNLERAIESLPPGYRIIFVLHDVEGYE
                     HNEIAEMMGCSIGNSKSQLHKARMKLRDLLKLSRAEKAVR"
     gene            4592..4804
                     /locus_tag="VE783_13425"
     CDS             4592..4804
                     /locus_tag="VE783_13425"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX54452.1"
                     /translation="MKALSWPCNLVLASTDRQFSSEYRVNDCQVQVRYLSGDTETDWQ
                     TLTQDELRRHFALNTPVAHWLRRRPA"
     gene            4826..5143
                     /gene="purS"
                     /locus_tag="VE783_13430"
     CDS             4826..5143
                     /gene="purS"
                     /locus_tag="VE783_13430"
                     /EC_number="6.3.5.3"
                     /inference="COORDINATES: protein motif:HMM:TIGR00302.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine synthase
                     subunit PurS"
                     /protein_id="HYX54453.1"
                     /translation="MAALSACSTSQFSDRELSYNFLILMKAYVTVMLKTTVLDPQGKT
                     IQGALKKMGYKGVGDVRQGKLFELKLETGLDKAAANAEVERIAKEVLTNPVIEEFSYR
                     LED"
     gene            5447..7327
                     /gene="glmS"
                     /locus_tag="VE783_13435"
     CDS             5447..7327
                     /gene="glmS"
                     /locus_tag="VE783_13435"
                     /EC_number="2.6.1.16"
                     /inference="COORDINATES: protein motif:HMM:NF001484.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004360 - glutamine-fructose-6-phosphate
                     transaminase (isomerizing) activity [Evidence IEA];
                     GO_process: GO:0006040 - amino sugar metabolic process
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine--fructose-6-phosphate transaminase
                     (isomerizing)"
                     /protein_id="HYX54454.1"
                     /translation="MCGIVGYVGKKRVVPVIIDGLKKLEYRGYDSAGIAVAGNGNGNE
                     LQVRRAEGKLRNLEEVIRLKPLEGTYGIGHTRWATHGRPTEENAHPHRDCTGKIVVVH
                     NGIVENYLPLKKKLIEEGHKFTTETDTEVIAHLVEKEFLKPANGHRPSLEEAVRKTVQ
                     KLTGVFALGVISAEEPNKIVAARNGPPAVIGLGDNEYFVASDIPAILYHTRDLFFMHD
                     GDLAVVTPNGVQVTDFNGKPMVREVQHVTWDPIMAEKGGFKHFMLKEIFEQPRAVRET
                     AIGRVSQDTGQVFLEEMEVTEEDFRQMQKMNIAACGTSWHAAQAGKFMIERLARVPVE
                     VDYASEYRYRDPIITPKDITLLITQSGETADTIAAQREAKQKGSKTLAICNVVGSMIA
                     RESAGTIYTHAGPEIGVASTKAFTAQLTALFLLAMRMGQVRRTISPEKSKQLMGELLK
                     IPAKLEALLSRDQETEELARRYQKSQDFLFLGRGIHYPIALEGALKLKEISYIHAEGY
                     PAGEMKHGPNALIDENLPVVVLATRDSNDPDSVQRYEKTISNIKEVKAREGKVIAVAC
                     EGDEEIKESVDHVIYVPEAPELLLPVLEVVPLQLLAYHIAVRRGCDVDQPRNLAKSVT
                     VE"
     gene            7449..7976
                     /locus_tag="VE783_13440"
     CDS             7449..7976
                     /locus_tag="VE783_13440"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX54455.1"
                     /translation="MPDERLRRETFWTRHPGRVALCVGVAAFTLGLLQDEFLAQEGWS
                     RWTLIVITDVFVGLIAGGFFFAFARAEKRNRELLRERMRTVAELNHHVRNALQVIKFW
                     GVQHENCLHDDPQIQLMKDSVDRIEWALKEVLPQYPEPGTKTVSAPANASITGERISV
                     PPVPPLAAEKELKPH"
     gene            complement(7973..9175)
                     /locus_tag="VE783_13445"
     CDS             complement(7973..9175)
                     /locus_tag="VE783_13445"
                     /inference="COORDINATES: protein motif:HMM:NF024241.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HYX54456.1"
                     /translation="MADEQQSSRLRRNLYIFGSVSFFNDTASEMAYWILPAFISSLGA
                     GPATLGLIEGIAESVAAAGKLFSGYLTDAAPRRKPIVVFGYLLANAVKPLLALASRSW
                     HVLLIRFADRTAKGIRGTPRDVMLAESVDPRKIGSAYGFLQSLDSAGAIFGPLVAWWM
                     LAHGRAMRSVFWLAVLPGFLAIVLVTLAREPQHRTPAGKQISLWRGPKLPFNFYYMLA
                     AVLIFSIGNSSDMFLVLRAQQLGVPPALAPLLGLVFNITYTLFSWPAGWLSDRQPKVL
                     MAAIGYLVFAVAYFGFAKGPATAWVWLIMSFYGLYYALTGPILRALVVETAAPGSRGR
                     AFGLYYFSTSIATLLASLLTGELWKHYGARLPFATSAAMALLAALMLLGKSVYRRGQA
                     RMLDPAEG"
     gene            complement(9201..>9386)
                     /locus_tag="VE783_13450"
     CDS             complement(9201..>9386)
                     /locus_tag="VE783_13450"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX54457.1"
                     /translation="TFTKQSRPHSWQSEINTHRALAGALLAGAAAALFTLFRGDRTEK
                     QIRKLSGEVKERLKRAA"
BASE COUNT         1980 a         2700 c         2667 g         2039 t
ORIGIN      
        1 agcacactgc cgctgtgtcc gtcggaggat ttccttcaac cttctgcact gcttcacttg
       61 tcttgctgcg gagagatggt atcccgtcaa tcaacagctc atctccttca tgaactggca
      121 aggccgtacg gataggagag aggtcgatcc cgtctttctc ataaccaaag aagtaaatgc
      181 ctgcaatctt gattttgcgc gtcggaaccg aatcggcgcg gtcgctctgc gcgctcggcg
      241 agggagacga tgtttcatgc gccggggccg gctggctttg accgtgggct aacgatgcaa
      301 acgcgggaaa ggccaggagc aatatcaacg atctaagcgg cacgatggct gctttcatgg
      361 tccttgcctg aagccggatt cgacgcgatt aatcccgcac tacttccacg ttctgcgtcg
      421 gaatgctcat cttcagcact ttgtagtcat cgctgaccca gagcagccag accgtgctgt
      481 cggtctgcat cttgagcttg ttgagctcct gctcctggcc ctttatggtg atcttttcgc
      541 ggcccagcag gtccactacc gcttcggcag ccaggtgctg ccggggaacc aggattccga
      601 aatggctggg accgcacatg agtccgttct tatcctgcac gcagccggtg gaaagatagc
      661 gccacaccag cagttcgcgg tgggaaaaga agttgtcgtc caggatcacc gtcgagagcg
      721 gcaggatatg cggaacatcg attttcttct ggtcggacgg ggtcacgtgc tccaccagaa
      781 gctgttcctt tggctcaacc agagactctt cctttgtggg cgccgttgcc cgccagctat
      841 aagacttgag ctcgcccttg ggagtgatct gcatctcggc ggtctggtcg gctttgaagc
      901 tgccatcatc caccttgatc tcagaggttg cgacgctcac gtcgctgcgc tgctcgatcg
      961 aaaacttttc attcccgatc tttttaccgt tcatgaaaat actgaacgat cccgagtccc
     1021 agattttttt gccgttcgtc gcggcctttt tgtctttctg atcactggcc ataagcatgg
     1081 ccggaatggc cgcggtgaga atcagcagga gagcagctcg cgtcagtttc atttctttac
     1141 ctccagccgt gaactgagca gctctgctat ctcagccgcc acggccttta ctgtcttgtt
     1201 catcgtctgg accttgtgtc gagcccgcgc gtatgcgggc tgcctttcca cgtatagttc
     1261 cagaaatctt tcttcatcgc ccgccagagg ccgtatgcga tcttcggcct ggcaccggcg
     1321 ccgcaactct tctgccggag catcgagcag gacggtcacg gctccatacc gttccagcaa
     1381 cacgcggttg cgcggctgaa caaaggttcc gccgccaagg gccactacca gatcgctctg
     1441 ggatgcggca tcttgcagca gatgctccag cgcctgcgct tcagcatcgc gaaaacccgc
     1501 ctctcctcgt tcggtgaaaa gcgtcgctat gcgcgcgcct tcccgtgcct cgatcaggtc
     1561 gtcaaggtcc tgaaaacgcc agccgaggtg cgccgcaagc gctttcccgg ccgaagtctt
     1621 ccctgccccc atgaacccga taagaaacac acgccggatt gaagccgcgc tgggcatgga
     1681 ggatttcggt tattaaaggc gtgttcccgc gtattttact gtttcttaac gcggattcta
     1741 ccactgaaag actggagttc caccgaagat gaacctgagt tggaggtgcc tgcaaaggaa
     1801 cgtccgccct taggcacgaa tacgggatgg gtcttggtct ggaggggaaa atcgttttcg
     1861 acctggccgc tacgcgaact tgctgtcaga tcaacggagg cggtctgggg caaagtcata
     1921 tcgatattgc cgctgtgcgt cctgaaggca taagtgccgc cgccggagca atcgcctttg
     1981 taggtgatgt tcccgctgcc ggtgcctacc ttcaccttgg tcccgttaac ctgggacaac
     2041 tgtacggctc cccctgaggt ggagacatcg acatggccgc ttacgttgtt gagcgctacc
     2101 ggtccgccaa cggtctgaat ctgcacgtgt gagcgcgcaa cattttgcac cgtgatatga
     2161 ccagtatcag agaaaagact tagatcgccg ttagcggcgt ctgccgtgat cggcgctgtg
     2221 gagctattga ctgtgaccga tgtcccggcc gggaccatca cgtccaggtc aacccgggct
     2281 tcatcggccg taggtttttg gtcgccgatg gcatgcgcgc ggatttccac ccgccgcttg
     2341 tcgggggtca cctgctggtc gacttctatt ttgtccgagt gtgcggtgta cgcgatcacc
     2401 acctgatggc cggaatcgga cttcaaattg atggaaccga agttattgac gatggttaca
     2461 gccccgccgg ctgccagatc caggtgcgct tccttgcgtg cggatgatga ctgcgcctgc
     2521 gctgcggcac agattgaagc catggtgaga accccgagga ccgttgcggt actcaggttg
     2581 gtcaggctaa cgctgatctt tttcatggct tgcaatcccc tcctcaaccg cttcagggta
     2641 acgagcgggc ggcggccatc tggtaaagca tgtccttctg ctggtaagcc tcgagcaact
     2701 gctgctgcgc cgccgtgtcc tgcggatcgc tgttcacggc ctgctgcgca tccgtgatgt
     2761 aagcgttcac ctcgcggagc ccattttcat aggccgtgcg cacttccggg ctgtcctgtg
     2821 acaccgccgc aatcaactgc tggtcgtcag tatcatcggc ctggatttgt gctgaaggaa
     2881 cgttgctatt ctgcgccgat tgtggtgtgg aaggcaactg tggacggtaa aacacaagaa
     2941 gcgcgctaaa cgcgagcgcg gctgccgtgg ccaggatcca gcctacgggt gtcgatgtct
     3001 tggtttgtgc ttgagaggtc gagtagttcg ttatatgtcc caaacgggac gatcgaccct
     3061 ccttgagcag gccctctcgt tgcagagact gctcaatgtt gccccatacg cgcgggttgg
     3121 ggtcatgcat ggggagcagc agttttgcct gctccgcgat gtatttcagg tcccgcacca
     3181 gttcgctgca ggaccggcac ccccgcaggt gcgcttcctc ttcctcattg ccgccattct
     3241 caatgatgta cggcaagact tcttgaaatt gctggcagtt cattttgtct ttgtcatcct
     3301 ctcccagtcc caaacgtgct tctcagccgc ttgttcagcg gacggccttt tcggctctgc
     3361 tgagcttgag caggtcgcgc agcttcatgc gcgccttgtg cagttgcgat ttactgttcc
     3421 cgatcgaaca gcccatcatc tccgcgatct cattatgctc gtaaccctcc acatcgtgga
     3481 gcacgaagat gatccgatat cccgggggca ggctttcaat ggcccgctcc aggttcactc
     3541 tgtcaattga accggcgagc acgttgtcgc gcgcgccgat gtctttcttg ggcccgtcct
     3601 catgctgcgg ctccagggcc tcatccagcg aaacttccgg caggcctttc ttgcgcaggt
     3661 gcatcagcac cacgttcacg gccagccggt gcagccaggt ggagaaggca gattctccac
     3721 ggaaggtcgc gatcttgcga taaagctgca ggaaggcttc ctgcgtcagg tcctccgcct
     3781 cggccgtgtt cccggtcatg cgcaggcaca gcgaatacac acgccttttg tgcagaccgt
     3841 aaagggcctc gaagctttcc gcgtcaccgc ccttggcccg ttctatggcc tctgcttctg
     3901 agatcccgga tgcagtgatt ttctttgctt gtgtcaattt gaccttataa ggccgctgct
     3961 ccgtaagatg cggcaaagta gctgctatgt tgtacgtcaa aggttccacc cggttgctac
     4021 ttgaatgatt aatggaacct aagagacgga actttggttg cctgagctgc cacggctcgg
     4081 gcacatgctc ctgtttcagg ctaaattggg gagcgaatct atgcaaattc ataggggacg
     4141 gcagccccca tgggcttttt tgtccttcaa ctgcggctcc cgactacgcg gtcttcggca
     4201 aaacatgccg ttccttgcgc ggcagcacca gcacgctgtg agcagtccga tccagccgga
     4261 cgaagaagtg tcggcagcat tcatcgcaaa gccataccgc tttttgccgt agtccgggcg
     4321 gcagatccca cagcttcgga tcgcttaccg gaaaaatgta cagcttccct tttcctattc
     4381 tcttgaagtg ttccggacat tggtgattgg cgcatttatc aacttttgga gcacgcatgc
     4441 agtccccaga tcgtgatctg tttcgtagag tattcgattt tatggaaggt ctggggtggc
     4501 cataaagttg cctgccagac cgcttttcgg gcagcgcgcc tggtcgaatt ccggcatcca
     4561 aggtcggtga gcatgcacgg gggcttgcgt aatgaaagca ctttcctggc cttgtaatct
     4621 ggtgctggct tccacagacc gccaattctc tagtgagtac cgggtcaatg actgtcaggt
     4681 acaggtccgc tacctttccg gcgacactga aaccgactgg caaaccctga ctcaggacga
     4741 actgcggcgg cactttgcct tgaatacgcc ggtggcgcac tggctgagac gccggccggc
     4801 atagcaaaat cagcggctcg ccgcagtggc tgcgctctcc gcctgctcca cctcgcaatt
     4861 ctctgatcgg gagctcagct ataatttcct catcctcatg aaggcctacg tcaccgtgat
     4921 gctcaagacc accgtcctgg atcctcaggg caagaccatt caaggtgctc tgaaaaagat
     4981 gggctacaaa ggcgtgggcg atgtgcgcca gggtaagctg ttcgaactta agcttgaaac
     5041 cggattggac aaagccgctg cgaatgccga agtcgagcgc atcgccaaag aagttctgac
     5101 gaacccggtt attgaagaat tcagctaccg cctggaagac taaagccagc gtctggcgag
     5161 tgcgaaaact tttgcactcc gttccttcca acatcctcag cccgacttta agtgtgtctt
     5221 atcggccaca ccgcaggtgc ctgtcgccga ttctaagttc tttttcatca gattcttacg
     5281 ctaaatcagc ttaggccgtg ctgcgtgctt cggagtagaa tggatttgca ccggcgggac
     5341 aaagtggcac atcaaatgca ctattcacga agtttaaggt tgtaagctcg agcctgagct
     5401 ttgcagacgt cctccttttt gcagcaaaag agcggagaag catcacatgt gcggaatcgt
     5461 tgggtatgta ggaaagaagc gggttgtgcc cgtgatcatc gacgggctga agaagctgga
     5521 ataccgcggc tatgactcgg ctgggatcgc cgtggccggg aatggcaacg ggaacgagct
     5581 gcaggtccgc cgcgccgaag gcaagctgcg caatttggaa gaggtgatcc gcctcaagcc
     5641 gctggaaggt acttacggaa tcggccacac ccgctgggcc actcacggac gcccgacgga
     5701 ggagaacgca catccgcatc gcgactgtac cggcaaaatt gtggtggtcc ataacggcat
     5761 tgtggagaac tatctcccgc tcaagaaaaa actgatcgaa gaaggtcaca aattcactac
     5821 ggaaaccgat acggaagtga tcgctcactt ggtggaaaag gaatttttga agcctgccaa
     5881 cggtcatcgc ccgagcctgg aagaggcggt gcgcaagact gtccagaagc tcacgggcgt
     5941 ttttgctttg ggtgtgatct cagcggagga gcccaataaa attgttgcag cgcgcaatgg
     6001 accgccggcc gtgatcggcc tgggcgacaa cgagtacttc gttgcgtcgg atattccggc
     6061 gattctctat cacacacgcg atcttttctt tatgcatgac ggcgatctcg ccgtagtgac
     6121 gccgaatggg gtacaagtga ccgatttcaa cggcaaaccc atggtccgcg aggtccaaca
     6181 cgtgacctgg gaccccatca tggcggaaaa gggcggcttc aagcacttca tgctcaagga
     6241 aattttcgag cagcctcggg ctgtccgcga aaccgcgatc ggccgcgtct cacaggatac
     6301 cggtcaggtc ttccttgagg aaatggaagt caccgaagaa gatttccggc agatgcagaa
     6361 aatgaacatt gcggcgtgcg gcacaagctg gcatgcagcg caggcgggca agttcatgat
     6421 cgagcggctg gcgcgcgtgc ccgtggaagt agattacgcc agcgagtatc gctatcgcga
     6481 ccccattatc acgcccaaag acatcacgct cctgatcacg caatccggcg agacggcgga
     6541 cacgattgcg gcccagcggg aagccaagca gaaaggcagc aagactctgg cgatctgcaa
     6601 cgtggtcggc tcaatgatcg cccgcgaatc ggcggggacc atttacacgc atgcggggcc
     6661 tgaaattggc gtggcttcca ccaaggcctt cacggcgcag cttaccgcgc tgtttctgct
     6721 ggccatgcgc atgggccagg tacgcaggac gatttctccg gaaaagagca aacagctgat
     6781 gggcgaactg ctcaagattc ccgccaagct ggaggcgctg ctcagccgcg accaggagac
     6841 ggaagagctg gcgcgccgct atcagaaatc tcaggacttt cttttcctgg gccgcggaat
     6901 ccattatccg attgctcttg aaggcgccct caagctgaaa gagatttcct acatccacgc
     6961 cgagggctac ccagcggggg agatgaagca cgggccgaat gccctgattg acgagaatct
     7021 tccggttgtg gtgctcgcca cccgcgattc aaatgacccg gattcggtgc aacggtatga
     7081 aaagaccatc tctaacatca aggaagtaaa ggcccgcgaa ggcaaagtga ttgccgtggc
     7141 ttgcgaaggc gatgaagaaa tcaaggagtc agttgaccac gtgatctacg ttccagaagc
     7201 tccggaattg ctgctcccgg tccttgaagt ggttccgctg cagcttttgg cctatcacat
     7261 cgccgtccgg cgtggctgcg acgtggacca gccgcgcaac ctggccaagt cggtcacggt
     7321 tgaatagagt tcaaagtgag tagctgcgtg ccagcagcta ctcacagctc gatcgttagg
     7381 tttcttagat ttctctcaca acaaaaaata tcgaaaggcg atttgtcgca gagctacaat
     7441 gagtgtttat gcccgacgag cgccttcgca gggagacatt ttggacccgt catccgggcc
     7501 gcgtagcctt gtgcgtcgga gtggccgcgt tcacgctcgg tctgctgcaa gacgagtttc
     7561 tcgcccagga agggtggtcg cgctggaccc tcattgtcat taccgatgtc tttgtgggac
     7621 tgatagccgg tgggttcttc tttgcattcg cccgcgcgga gaaaagaaac cgcgaactgc
     7681 tgcgcgaacg catgcgcacc gtggcggaac tgaaccatca cgttcgtaat gccctgcaag
     7741 tgattaaatt ctggggtgtg cagcacgaaa actgcctgca tgacgatcct caaatccaat
     7801 tgatgaaaga ttcagtcgac cgcattgagt gggcgctgaa agaggtgctg ccgcagtacc
     7861 cggaaccggg cacgaagacg gtcagtgcgc ctgcaaatgc atccatcacc ggtgaaagaa
     7921 tttccgtccc tcctgttcct cccctcgcgg cggaaaagga acttaagccg cactaaccct
     7981 ctgcgggatc cagcattctc gcctgtcctc tccgatacac gctttttccc agcaacatga
     8041 gtgccgccag cagagccatg gctgccgaag tcgcaaaggg caggcgtgcg ccataatgct
     8101 tccacaattc tcccgtgagc aaactcgcaa gcaaggtggc gatgctggtg gagaagtaat
     8161 acaggccgaa agcgcggcca cgcgatccgg gggcggcagt ctcaaccacc agcgcacgca
     8221 aaatcggacc ggtcagggca tagtacaggc catagaagga catgatgagc cacacccacg
     8281 ctgttgccgg cccttttgca aaaccgaaat aagcaacggc gaataccagg tacccgattg
     8341 cagccatcag cacctttggc tggcggtcac tcagccaccc agccggccac gaaaacagag
     8401 tgtaggtgat attgaagaca agcccaagca atggagccag cgccggcggg acaccaagct
     8461 gctgcgcgcg cagcaccaga aacatgtcgc tggagttgcc gatggagaag atcaggacgg
     8521 ccgcgagcat gtaatagaag ttgaaaggaa gtttcggtcc acgccataaa gagatttgct
     8581 tccctgccgg cgtgcggtgc tgcggttcgc gtgcaagcgt aactagaaca atcgccagga
     8641 agccgggcag caccgccagc cagaagacgc tacgcatggc gcggccgtga gccagcatcc
     8701 accacgccac cagcggcccg aagatggcac cggcagaatc aagcgattgc aggaagccgt
     8761 acgcgcttcc aattttcctc ggatccaccg attcagcgag catcacgtct cgcggcgttc
     8821 ctcggatccc ctttgcagtg cgatcagcaa aacgaatcaa aagaacgtgc cacgagcggc
     8881 tggcgagcgc aagcagaggt ttgaccgcgt tcgccagcag gtagccgaag acgacgattg
     8941 gcttacgccg gggcgcggcg tcagtaagat agccggaaaa gagcttgccc gccgcggcaa
     9001 cgctctccgc aattccttca atcaggccga gcgttgccgg tcccgcgccc agagaagaaa
     9061 taaacgccgg cagaatccag taggccatct cactcgcggt gtcattgaag aatgacaccg
     9121 agccgaagat gtacaggttc cgcctgagtc tggagctttg ctgctcgtca gccatggtga
     9181 cgaacagtat gccatctcag ttacgcggcg cgcttgagcc gctctttcac ttctccggag
     9241 agcttcctga tctgcttctc agttcgatcg cctctgaaaa gcgtaaacag tgccgcagct
     9301 gcgccggcga gcagcgctcc ggcgagcgca cgatgcgtgt tgatctccga ttgccagcta
     9361 tgcgggcgcg actgtttcgt gaatgt
//
LOCUS       DASQYP010000414         8485 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_145499, whole genome shotgun sequence.
ACCESSION   DASQYP010000414 DASQYP010000000
VERSION     DASQYP010000414.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 8485)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8485)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8485
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_145499"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..783
                     /locus_tag="VE783_13455"
     CDS             <1..783
                     /locus_tag="VE783_13455"
                     /EC_number="4.2.3.1"
                     /inference="COORDINATES: protein motif:HMM:NF006050.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine synthase"
                     /protein_id="HYX54458.1"
                     /translation="VPLANLVECTAYGAKVTLVDGLISDCAKIVNERKQAEGWFDIST
                     LKEPFRVEGKKTMGYEVAEQLNWELPDAIFYPTGGGVGLIGMWKAFNEMEQLGWLKSG
                     SKRPKMVTVQAAGCAPVTKAWNEHKQVAEVWQNAHTLAAGLRVPKPYADYIILDILKK
                     SGGTAVSVSDDEIFAGVKQWASDEGLFASPEGAACLPAYERLVREGFLKPTDKVVLFN
                     TGSGLKYIDVTADALKIGAGQQPSSHMAQPAARKMGGIIQPY"
     gene            898..2109
                     /locus_tag="VE783_13460"
     CDS             898..2109
                     /locus_tag="VE783_13460"
                     /inference="COORDINATES: protein motif:HMM:NF014342.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanyl-tRNA editing protein"
                     /protein_id="HYX54459.1"
                     /translation="MTDRLYYHNSFLYEFDASVVDSLERDGRHAVVLDRTAFYPTSGG
                     QVHDTGKLKVNGREVVVTEVVDEEDGRVLHFTDAAVAPGTAVRGSVDVARRLDHVQQH
                     TGQHVLSAAFIKLFEMPTVSFHMGEESCTIDLQTVGVSPRQVEQAERLSNEIIAENRP
                     VAIRFVPVAEAHTLGLRKIPPRETGDLRLIDIRDFDLCACGGTHVQATGQIGSILLRK
                     IEKVKQGIRVEFVCGLRAVATARRDYTALTEAAGLLSTHIHELPQQIRKQQEDARATS
                     KAQQKLLEEIAALQAERMLASLATEQRVITEVFTERDAGFVKLLAQKLTAGKKETIAL
                     LAALAGQPTLVFAQTSAGKHNMGQLLREIVTRLGGRGGGTAELAQGGIPAGAADRAAI
                     ESLLQETAAKL"
     gene            2121..3521
                     /locus_tag="VE783_13465"
     CDS             2121..3521
                     /locus_tag="VE783_13465"
                     /inference="COORDINATES: protein motif:HMM:NF006596.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /protein_id="HYX54460.1"
                     /translation="MLKTLLRLSCAAVLVCSLSLSAQQKSPDFTAAQDEGIQFLGGLV
                     KIDTSNPPGNEARAAEYIKNVLAAEGIQAQIYESAPGRGNLVARLKGNGKKKPLLLMG
                     HLDVVGVERDKWTVDPFGAITKDGYLYGRGSIDDKSMDAANLEVFLLLHRLKVPLDRD
                     VILMAEAGEEGTTEFGIDFMVEKHWDEIACEYALNEGGGIHEDSHGKLEYVAVSTTQK
                     VPRGFTLISQGMSGHGSAPRVDNSIAHLAAAVDKTARWQSPMRLNETTKRFFEQMAKI
                     SPPEQAQLYGHIDDPAVQQKLQAVNPSYYSMLRTSLVPTIIKGGFRSNVIPAEAEARF
                     DVRALPDENMDALKADLMKLINDPQIHIVDNENAHARPATPPSSLDSDGFHALEHAAQ
                     KVFPGIPTIPIMQVGATDSAELRAKGVQAYDIGTVLSPEDLKRVHGNDERLEIAGFGK
                     FVQFLYTAAVELAGSH"
     gene            3543..4325
                     /locus_tag="VE783_13470"
     CDS             3543..4325
                     /locus_tag="VE783_13470"
                     /inference="COORDINATES: protein motif:HMM:NF038353.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PEGA domain-containing protein"
                     /protein_id="HYX54461.1"
                     /translation="MKVCRIGGWLFVLVAVASLFAKDEPAQIMVWPESGKPVLRFSFG
                     RFKEQGPSHSYLTETTVENLWDKKIELATFSLYLFDKDKIRIGEGYISVSNLGPGEKT
                     RFQTGIMASGTPASIQLSPKNLPAELDTGRPKKLISLTVNTVPQGAALKVDGEDAGTT
                     PKIIHVSVGKHMLDFAKEGFTPGRFPFDVGPDDASGGSVSFEMGAVAHDTLEMRDGSV
                     LVGDVESMSATEVLAEVDGKLQHIDRNKVKRLILTERDAPGK"
     gene            complement(4389..5657)
                     /locus_tag="VE783_13475"
     CDS             complement(4389..5657)
                     /locus_tag="VE783_13475"
                     /inference="COORDINATES: protein motif:HMM:NF016101.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016788 - hydrolase activity, acting on
                     ester bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alkaline phosphatase family protein"
                     /protein_id="HYX54462.1"
                     /translation="MKKQLATLIALAAMAVNLCAEEGAVPRGVPRLDHVFVIVMENHG
                     FTQIVNNPNAPFANQLIKTANTATNYFAVGHPSLTNYLEIVGGSNFGIRSDNNPDWHN
                     LNCATNLASGTPNLDGPVSSGLVCPIAGTGTDAATPAIDTTNECPNPPQPCPPGLIDI
                     DGSALPPAPTMGKTIADQLAAEGRTWKSYQESLPPTGADNIGFSDGFFTDNPNIHPVP
                     ASETQGLIKLYAAKHNPFVYFRSVQEGHIPGLSLSNVVGFQGQGGLFEDLASGKVPQF
                     SLIAPNQCNDQHGRGNAGPACDFDPSDDGSQAGLNPGLIFVGDLALRNIVKSIHASPA
                     WKEGRNAIVVVWDENDFSFVPNLNQVVAVVDTNYGVHGVKSSQRYTHFSLLKSIEAGL
                     GLPCLNHACDTNVKAMSDLFAGKTGDRDDR"
     gene            5861..6502
                     /locus_tag="VE783_13480"
     CDS             5861..6502
                     /locus_tag="VE783_13480"
                     /inference="COORDINATES: protein motif:HMM:NF012655.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HYX54463.1"
                     /translation="MPQLLKPAKSKKQVVSEFRQSEIITAARQVFAEKGYIATTVDEI
                     AARAGLAKGTIYVYFESKEQIYNAVLENDLETLRSLTLEKIGAAETAKAKIAAYINTR
                     FEYCEKRRDFFRIMHIEPSGSPVMSKAKQREWLKEPVLALTKAIETAMKKGDISSWPA
                     ESLAWTVADLTSGALQRRLLNTPSRTAREDADFLIDFIYAALRVAASPERKGA"
     gene            6551..7687
                     /locus_tag="VE783_13485"
     CDS             6551..7687
                     /locus_tag="VE783_13485"
                     /inference="COORDINATES: protein motif:HMM:TIGR01730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HYX54464.1"
                     /translation="MSAQQRCSSIFATVVLLTLATLALSGCSGVNASAPPPKPPEVQV
                     TQVVQKDVPIVNEWTATLDGFVNAQIQPHVSGYLIRQDYKEGSYVRKGQVLFEIDPRP
                     FSAALNQAKGQLAQAEAGLVKTEQDVKRDTPLAQARAIAQSQLDTEIQSQLGAKAAVE
                     TAKAAVEQAELNLEFTKVTSLVDGIAGIAQTQIGNLVSPTTVLTSVSQVNPIKAYFSI
                     SEQQYLASQRADKNGSTDPWKGVKLKLMLADGTEFPHPGSFLLADRQVDPNTGTIRVA
                     GSFPNPNNLLRPGQFGRVIAETGTQRSALLVPMRAVTELQGNYQLAVVGSDNKVNIRP
                     VKVGPTVGKMFVIEDGLKPQDRVIVEGLQKVKDGTVVTPKAANL"
     gene            7706..>8485
                     /locus_tag="VE783_13490"
     CDS             7706..>8485
                     /locus_tag="VE783_13490"
                     /inference="COORDINATES: protein motif:HMM:NF013069.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HYX54465.1"
                     /translation="MAKFFVNRPIVAMVISIITIIAGLVSMRSLPLAQFPQIVPPQII
                     VSTTFTGGDASTIEQSVATPLEQQMNGVDNMLYMQSTNANDGTLQETVTFDVESDPNI
                     DQVNVQNRLAQAQPNLPPDVNQFGFTLRKSTGFPMMLIALYSPKGTYNSLFLANYATI
                     NINDALFRVNGVGDVRVFGAGDYAMRIWVKPDFLAKLGITIPEITRALQQQNNVNPAG
                     QIGSEPAPSGNEMTYTVRAPGRLVTAEQFGNIVIRSNPDGSN"
BASE COUNT         1849 a         2345 c         2560 g         1731 t
ORIGIN      
        1 gtaccgctgg ccaacctggt ggaatgcacc gcgtatggcg caaaagttac cctggtggat
       61 gggctgatct ctgactgcgc gaagatcgtg aacgagcgca agcaggccga aggctggttt
      121 gatatctcca cgctgaaaga acccttccgc gtggaaggca agaagaccat gggctatgaa
      181 gtggccgagc agctcaactg ggagctgccg gatgccatct tctatcccac gggcggtggc
      241 gttggactga ttggaatgtg gaaggccttt aacgagatgg agcagcttgg ctggctgaag
      301 tcaggcagca agcgcccaaa gatggttacc gtgcaggccg cgggctgcgc gccagtgacc
      361 aaggcgtgga acgagcacaa gcaggtggcg gaagtctggc agaacgcgca cacgttggcc
      421 gcggggcttc gcgtgcccaa accgtacgcc gactacatta ttctcgacat cctgaagaag
      481 agcggcggca cggcggtttc ggtcagcgat gatgagatct tcgccggggt gaagcagtgg
      541 gccagcgatg aaggattgtt tgcatcgccg gagggcgcgg catgtctgcc ggcgtatgaa
      601 cgactggtgc gcgaaggctt cctcaagccc acagataaag ttgtgctctt caacaccgga
      661 tcaggactga aatacattga cgtaacggct gatgcgttga agatcggtgc aggacagcag
      721 ccgagttcgc acatggcgca accggcagcg agaaaaatgg gagggatcat tcagccgtac
      781 taaaagagca attagcaatt agccaaacag agcaaatgtt agtggctgac tgcgacttac
      841 taactctgaa ttcgtagttg ctgttgctaa ttgctatttg ccaattgctg gtttcctatg
      901 actgaccgcc tttattatca caattctttt ctctacgagt ttgacgcgag cgtcgtcgat
      961 tcgctggagc gtgacggtcg tcatgccgta gtgctcgacc gcacggcgtt ctatccgacg
     1021 agtggcggtc aggtacatga cacgggcaag ctgaaggtga atggtcgcga agtcgtggtg
     1081 acggaagtgg tggacgaaga agatggccgt gtgctgcact tcactgacgc ggcggtcgca
     1141 cctggcacgg cggtccgcgg cagcgttgat gtggcacgac gactcgatca cgtccagcag
     1201 cacacgggcc agcatgtgct ttcggcggcg ttcatcaagc tgttcgaaat gccgactgta
     1261 agcttccaca tgggagagga aagctgcact atagacctcc agacggttgg cgtttcgccg
     1321 cgccaggttg aacaagccga gcggctctcg aacgagatta ttgccgagaa tcggccagtg
     1381 gcgatccgtt ttgtgccggt ggcggaggct cacacgctgg ggctgcgcaa gattcctccg
     1441 cgagaaacag gtgatctgcg gctgatcgat atccgcgact ttgatctttg tgcctgtggc
     1501 ggcacgcatg tgcaggccac gggccagatt ggcagcatcc tgctgcgcaa gatcgagaag
     1561 gtgaagcagg gaatccgggt agagtttgta tgcgggctgc gcgccgtcgc gactgcgcga
     1621 agagattaca cggccctgac ggaagcggca gggctgctct caacccacat ccacgaactg
     1681 ccgcagcaga tacgcaagca gcaggaagac gcccgcgcca cgagcaaggc gcagcagaaa
     1741 ttgctggaag agatcgccgc acttcaggcg gagcgaatgc tggcgtcgct tgcgaccgag
     1801 cagcgcgtga tcaccgaagt ctttactgag cgtgatgcgg ggttcgtcaa gctgttggcg
     1861 cagaagctta ccgcaggcaa aaaggaaact atcgcgctgc tcgctgcttt ggcaggccag
     1921 ccgactctcg tcttcgccca gacttccgcc ggcaagcaca acatgggcca gcttcttcgc
     1981 gaaatcgtga ccagacttgg tggtcgcggc ggcgggacag ctgagcttgc gcagggggga
     2041 atcccggcag gcgcggcgga tcgcgccgct atcgaatctc tcttgcagga aaccgcagca
     2101 aagctctaat ctgacacgct atgctaaaaa cccttctccg tctctcatgc gcggctgtgc
     2161 tcgtgtgcag cctttctctt tctgcccagc agaagtcccc ggacttcacc gctgcccagg
     2221 acgaagggat acagtttctc ggcggcctgg tgaagatcga taccagcaat cctcccggga
     2281 atgaggcgcg ggcggcggag tatatcaaga acgtgctcgc ggcggaaggc attcaggcgc
     2341 agatctatga gtccgcgccg ggccgcggca acctcgtggc gcggctgaag ggcaatggca
     2401 agaagaagcc actgctgctt atgggacatc ttgatgttgt gggcgtggag cgcgacaagt
     2461 ggactgtgga tcctttcggc gcgatcacca aagatggtta tctttatggt cgcggctcga
     2521 ttgatgacaa gtccatggac gcggccaacc ttgaggtctt tctgctgctg catcggttaa
     2581 aggttccgct ggatcgcgac gtgattctta tggccgaagc cggggaagag ggcaccactg
     2641 agttcggcat tgacttcatg gtggagaagc actgggacga gattgcctgt gaatacgcac
     2701 tgaacgaagg cggtggaatt cacgaggaca gccacggcaa gctggagtat gtggctgtct
     2761 cgaccacgca gaaggtgccg cgcggtttta ctttgatttc ccagggaatg agcgggcacg
     2821 gttcggcgcc acgtgtcgac aactccattg cgcatctggc cgccgcggtc gacaagactg
     2881 cgcgctggca atcgccgatg cggctaaatg agacgacgaa gcgtttcttc gagcagatgg
     2941 caaaaattag cccgccggag caggcgcaac tctacgggca tattgatgat cccgccgtac
     3001 agcagaagtt gcaggccgtg aatccttctt attactcaat gctgcgcacc tcgctggtgc
     3061 ccaccatcat caaaggcggt tttcgctcca acgtgatccc ggcggaagcc gaggcgcgct
     3121 ttgacgtgcg tgcgctacct gacgaaaaca tggacgcgct caaggctgac ctgatgaaac
     3181 tgatcaacga cccccagatt cacattgtgg acaacgaaaa tgcgcatgcg cggccagcca
     3241 cgccgccctc gagcctggat agtgacggct tccatgcgct ggagcatgcg gcgcagaagg
     3301 tcttccccgg aattccgacc atccctatca tgcaggtggg ggctacggat tcggcagagc
     3361 tgcgcgcaaa gggcgttcag gcgtatgaca tcggcacggt gcttagcccg gaggatctca
     3421 agcgcgtgca tggcaatgat gagcgattgg agatcgccgg cttcggcaag ttcgtgcagt
     3481 tcctttacac cgctgcagtt gagctggcgg gttcgcactg agaacagaac gtgggagagc
     3541 tcatgaaggt ttgcaggatc ggcggttggt tgtttgtgct ggttgcagtg gccagtcttt
     3601 tcgcgaaaga cgaacctgcc cagatcatgg tctggccaga atcagggaag ccagtactgc
     3661 gattctcgtt cggcaggttc aaggagcagg gaccctcgca cagctaccta actgagacca
     3721 cggtggagaa tctgtgggac aagaaaatcg agctggcaac attctcgctc tacttgtttg
     3781 ataaagacaa gatccggatc ggcgaagggt acatctcggt atcgaatctc ggcccgggcg
     3841 agaaaacgcg gtttcaaacc gggatcatgg cttctggcac gccggcatcc attcagcttt
     3901 cgcccaaaaa cttgcctgcg gagctggaca cgggccggcc caaaaagctg atttcgctga
     3961 ccgtcaacac ggttccgcaa ggcgcagctc tgaaggtaga tggagaagat gcagggacca
     4021 cgcccaagat cattcacgta agtgttggca agcacatgtt ggacttcgct aaggagggtt
     4081 tcacccccgg gcgtttcccg ttcgatgttg ggccggacga tgcgtcgggc ggcagcgtga
     4141 gctttgagat gggtgctgtg gcccatgaca cgctggaaat gcgcgatggc agcgtgctgg
     4201 tgggagatgt ggagtccatg tctgccacgg aggtcctcgc ggaggttgat ggcaagctgc
     4261 aacacattga ccgcaacaaa gtgaagcgac tgatcctgac agaacgggat gcgccaggaa
     4321 agtagcgcat cgttcaataa aaaaagggcg ctgcttgagc agcacccttc gactgcagat
     4381 cggcttattt atcggtcgtc gcgatcgcca gttttgccgg caaacaggtc agacattgct
     4441 ttcacgttgg tgtcgcaggc gtggttcagg cagggaaggc ccaggccggc ttcaatggac
     4501 ttcaagagtg agaagtgcgt atagcgctgc gagctcttta cgccatgcac gccgtagttg
     4561 gtgtccacaa cggccaccac ctggttcaga ttgggaacga agctgaaatc gttttcgtcc
     4621 cacaccacca caatggcatt gcggccttct ttccaggccg gcgatgcatg gatcgacttc
     4681 acgatgttgc gtagcgcgag gtcgccaacg aagatcaggc ctggattgag tccagcctga
     4741 gagccatcgt cgctggggtc aaaatcgcac gctggccccg cattgcccct cccatgctgg
     4801 tcattgcatt ggttgggggc aatcagagag aactggggaa ccttacctga ggccaaatct
     4861 tcaaatagcc caccttgtcc ctggaatccc acaacgttgc tgaggctcag cccgggtatg
     4921 tggccttcct gaacgctgcg gaagtaaacg aacgggttgt gcttggccgc atacaacttg
     4981 atcagaccct gggtttccga agccggcacg ggatggatgt tcgggttgtc ggtgaaaaaa
     5041 ccgtcactga agccgatatt gtcagcgccg gtgggcggca ggctttcctg gtagcttttc
     5101 caggtgcggc cttcggcggc gagctgatca gcaatggttt tgcccatcgt gggggcggga
     5161 ggcaatgcac ttccatcgat gtcgatgagg ccgggagggc agggctgtgg tggattcggg
     5221 cactcattgg tggtgtcgat ggccggcgtt gccgcatcgg tgccggttcc cgcgatcggg
     5281 caaaccaggc cgctggagac cgggccatca aggttcggcg tgcctgacgc caggttggtt
     5341 gcgcagttga ggttgtgcca gtcaggattg ttgtcactgc ggatgccaaa gttcgatccg
     5401 cccacgatct ccagatagtt ggtaaggctc gggtgcccaa cggcgaaata gttcgttgcc
     5461 gtgttggcgg tcttgatcaa ctggttggca aacggagcat tcgggttatt gacgatctgg
     5521 gtgaagccat ggttctccat cacgatcacg aagacgtggt ccaggcgagg gacgccgcgg
     5581 ggcaccgcac cctcttctgc acagaggttt acggccatcg ctgccagggc aatcagggta
     5641 gctagctgct ttttcattgc gtttttcacc ttctcaggag ggaatcagtc ccttcaccgc
     5701 taagggcggg ctcggtattg agggacgcag gtaccctaag agggccagat tgtcgcccag
     5761 ttaatggctg gtaaatatct tatgaatccc gcagacgggc tgaatcatca gtactatttg
     5821 ttgaccgttc ggtcagcagt ctgtactatc aggtcacttt atgcctcaac ttctcaagcc
     5881 ggccaagtca aagaaacagg ttgtctcgga atttcgccag tcggagatca tcaccgctgc
     5941 gcggcaggtg tttgccgaaa aaggctacat agccaccacc gtggatgaaa ttgccgcgcg
     6001 cgccgggctc gccaaaggca ccatctacgt ctatttcgag tccaaagaac aaatctacaa
     6061 cgccgttctg gagaatgacc ttgagacact gcgcagcctc actctggaaa aaatcggtgc
     6121 cgcggagaca gctaaggcca agattgcggc ctacatcaac actcgtttcg agtactgtga
     6181 aaaacggcgc gacttcttcc gcatcatgca catcgaaccc tctggctcgc cggtgatgag
     6241 caaggcgaag cagcgtgagt ggctaaagga acctgttctc gcgctcacca aagctattga
     6301 aaccgccatg aagaagggcg acatcagcag ttggcctgcg gaatctctgg cctggaccgt
     6361 ggctgatctc acctccggcg ccctgcaacg gcgtttgctc aatacgccca gtcgcacggc
     6421 ccgtgaagac gcggattttc tcattgattt catttatgcg gcgcttcgag tggccgcttc
     6481 tcctgaaagg aagggagcct aaatgcagcc cctcactcct ccaactcaag ctctggttag
     6541 aaaccccttc atgtctgctc aacagcgctg cagctcaatt ttcgccaccg tcgttctact
     6601 tactctcgcg actttagcgc tgagcggttg cagcggtgta aatgcctctg ctcctccccc
     6661 gaaaccgccg gaggtccagg tcacgcaggt ggtgcagaag gacgtaccca tcgtcaatga
     6721 atggacggca acgctggatg gttttgtgaa tgcccaaatc cagccgcacg tttccggtta
     6781 tctcatccgg caggactaca aggaaggctc ttacgtccgc aaagggcagg ttcttttcga
     6841 aatcgaccct cgaccgttct cggcagcgct gaaccaggcc aaaggtcagc tggcgcaggc
     6901 agaagcaggg ctggtgaaga cagagcaaga cgttaagcgt gatactccgc ttgcgcaggc
     6961 gcgcgccatc gcgcagagcc agctcgatac cgaaatccaa agtcagctcg gtgcaaaagc
     7021 ggccgttgaa accgccaagg ccgcggtgga gcaggcggaa ctcaatctcg aattcacaaa
     7081 agtcacctcg ctggtcgatg gaatcgccgg catcgcgcag acgcagatcg gcaatctggt
     7141 gagtcccacc acggtgctga cctcagtttc acaggtgaat cccatcaagg cttacttctc
     7201 catcagcgag cagcagtacc ttgcttcgca gcgcgctgat aaaaacggct ccactgatcc
     7261 ctggaagggc gtgaagctga agctcatgct ggccgacggt accgagtttc ctcatcccgg
     7321 ctcgtttctg ttggccgacc gtcaggtgga tccaaacacg ggaaccattc gcgttgccgg
     7381 ctcatttccg aatcccaaca acctgcttcg ccccggacag tttggccgtg tgatagcgga
     7441 gaccggtacg cagcgttcag ctctgctggt tcccatgcgc gcagtcacag agctgcaagg
     7501 taattaccag ctcgccgtgg ttggctcgga caacaaggtc aacatccgtc cggtgaaggt
     7561 tggtcccacg gtgggcaaga tgtttgtgat tgaagacggc ctcaagccac aggatcgcgt
     7621 gatcgtagaa ggactgcaga aggtaaagga tggtacggta gtcacgccga aggccgcgaa
     7681 cctgtaaaga gaaagcttaa ctgtaatggc aaagtttttc gtaaatcgtc ccattgtcgc
     7741 catggtgatt tccatcatca ccatcatcgc cgggctggtc tccatgcgga gcctgccact
     7801 ggcgcagttc ccgcagatcg ttcccccgca gatcatcgtc agcaccacgt tcaccggtgg
     7861 cgacgccagc acaatcgagc agtcagtggc cacgccgctg gagcagcaga tgaacggcgt
     7921 ggacaacatg ctgtacatgc agtccaccaa cgccaatgac ggcacactgc aggagaccgt
     7981 gacctttgac gtggagagcg atccgaacat cgaccaggtt aacgtccaga accgcctggc
     8041 gcaggcgcag cctaatcttc cgcctgacgt gaaccagttt ggcttcacgc tgcgcaaatc
     8101 cactggcttt cccatgatgc tgatcgccct ctactcgccc aaaggaacct acaactcttt
     8161 gttcctggcg aactacgcaa ccatcaacat caatgacgcg ctgttccgcg tcaacggcgt
     8221 gggtgatgtg cgcgtcttcg gcgcgggtga ctatgccatg cgcatctggg tcaagccgga
     8281 ttttctcgcc aagctgggca tcaccatccc ggagattacg cgcgccctgc agcagcagaa
     8341 caatgtaaat cccgcggggc agatcggatc tgagcctgct ccttccggta atgaaatgac
     8401 ctatacggtc cgcgcgcccg gccggttggt tactgccgaa cagttcggca acatcgtcat
     8461 tcgttccaac ccggatggct ccaac
//
LOCUS       DASQYP010000415         4234 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_274800, whole genome shotgun sequence.
ACCESSION   DASQYP010000415 DASQYP010000000
VERSION     DASQYP010000415.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 4234)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4234)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4234
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_274800"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(418..1425)
                     /locus_tag="VE783_13495"
     CDS             complement(418..1425)
                     /locus_tag="VE783_13495"
                     /inference="COORDINATES: protein motif:HMM:TIGR00730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR00730 family Rossman fold protein"
                     /protein_id="HYX54466.1"
                     /translation="MSNGKPTDPENDQDFEPGQLEPAQLAYLNPDFLNSPDGRILRIM
                     AEYVEPLARFRREKIQDTVVFFGSARFASQTAADEKLSSLENGESSKRVEEKFTVLEK
                     PGSAKPAAPEQQPGGNEKDQLQAALKRAHAGVEMARYYEDARQLAKILTEWSSQLPGR
                     RHRFVVTSGGGPGIMEAANRGAREANGKTIGLNIRLPFEQYPNPYITPELNFEFHYFF
                     MRKYWFAYLSKALVVFPGGFGTLDELFEILTLAQTHKLAKKIIVIVYGREYWSRVLNL
                     DALADSGAISPDDTKLFSFCDTPQEAFECLREGLTRFHLEPQLVRPPADEGPEIAKTL
                     P"
     gene            complement(1578..1886)
                     /locus_tag="VE783_13500"
     CDS             complement(1578..1886)
                     /locus_tag="VE783_13500"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX54467.1"
                     /translation="MNFTSANLESPAGPPTEQEEHLPPVWLQRAFVVVYVLFCMTLGL
                     TLIALPWAPNWFDRGLIMRFPLLQVILQNGFLRGAISGLGVVDIWLGVLEAVHYHDRR
                     "
     gene            complement(1925..>4234)
                     /locus_tag="VE783_13505"
     CDS             complement(1925..>4234)
                     /locus_tag="VE783_13505"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX54468.1"
                     /translation="DQVRDNPEALSSLNRLMGGTGQSAESAEVLEMQAHAFAKKGGFA
                     EARDLYKRLSEIEPENSLHAQNYKQMLSKLGEDSASRILSPEEAAQAFMVEELDESNT
                     LVQQKYDPPTETAIESALTDAELFVSYNVPSKAIPPLEAALPLAPHDVALNQRLATLY
                     ARAERWPDAARVCKTLAEVYRELGHDKESAKYAEASKRYALRGGGIAPAAPAAELPVR
                     SGAGLLEPSAVQPQAAIHPLLVTPTEATTSGPAINKQSVAAEPSMAEPSIKEFSFDMP
                     DQIVVEHEVTQTYEVVHEEPRPVEMELMAAAHEPEVEIEPVAIAPQTEEIDLSNEWES
                     MITVEPVEAEAPAAPPPPPAPAKSRPAFKDPFAQSAPVHGVKKPAPEPEPEVIEEPQG
                     GSGVCYRNDEKVQEIQFYISQQMWPAAKKAIDELAEMAPDAAELPELIAAVAAGQSQP
                     ATTMQASEAFAGTALDSAANVDFLPPPFAAPAPRTPAIQPEPEIVVEAEPEPVEAEPV
                     AFTATKEAPAESAVTEHIFEIEQETPRSMPKAVAHAAAQPMFAEPAAHSTEDILTDFI
                     HDLEGGDLADFAPKPKAEPAASTPAPGLAAAKAEPVAAMATKPAYSNGGMKEAEAASM
                     LNDILADLQDETAEPTAAEEDPETHYNLGIAVKEMGLLDEAIGELQKVCRGIDQGHKF
                     SQPIQAYTWLAQCLVDKGAPEAAVRWYQKALHLPGLDDSSRNAIYYDLGSAYEAFGDK
                     KSALANFMEVYGSNIDFRDVASRIKTLKS"
BASE COUNT          756 a         1312 c         1212 g          954 t
ORIGIN      
        1 cctttgtgct ccttcgtgcc ctctctcgta aatgcaaccg ggaggtacaa gagtctgcca
       61 ctctctggta aatgcaaccg ggagacactg gggtctgtca ctcgcatcgc ccgagtgccg
      121 gtaggcgcga catgagttag cccagcccgt ttccgaggcg agcgaagcga gctgaggaat
      181 aagggctggg taagctgcta ataaaccatt tcctcacgcc gtaggcccgt cgcgcagcgc
      241 agcggagcga caagaaatga gcgccagaaa accattttca tgctcgtttg ggaacacccc
      301 gttcattgct ccttggtggt aaatggagtt tgagggtttc cgccaaaggc caagggctaa
      361 gggccaacgg cctctggtag ttccgattcc ggcgatcacg cgcgatctcg gcgatcgtta
      421 cggcagcgtc ttcgcaattt ccggtccttc atcggctggc gggcgcacca gttgtggctc
      481 aagatggaat cgagtaagtc cttcacgcag gcactcaaag gcttcttgcg gcgtatcgca
      541 gaaagaaaaa agcttggtgt catctggcga aattgcgccg gagtcagcca gtgcgtcaag
      601 attaagtacg cggctccagt attcgcgccc atatacgatc acgatgatct tctttgcgag
      661 cttgtgcgtc tgcgccagcg tcagaatctc aaacagctcg tccagcgttc caaaaccgcc
      721 gggaaaaacc accagcgcct tggacaggta ggcgaaccag tacttacgca taaaaaagta
      781 gtggaactcg aaattgagct ccggcgtgat gtacggattc ggatactgct caaaaggcag
      841 gcgtatgttc aggccaatgg tcttgccgtt ggcctcgcgt gctccgcgat tcgccgcctc
      901 cataatcccc ggtccgccgc ctgacgtcac cacaaacctg tgccggcgtc cgggaagctg
      961 gctgctccat tccgtaagga tcttggcgag ctggcgcgcg tcttcgtagt agcgggccat
     1021 ctccactccg gcatgcgcgc gtttaagggc cgcctgaagc tggtctttct cgttgccgcc
     1081 gggctgctgc tccggggccg caggctttgc cgatcccggt ttctccagga ccgtgaattt
     1141 ttcctccacc cgtttgctcg actcgccatt ctccaggctg ctgagctttt cgtccgctgc
     1201 tgtctggctg gcaaatcgcg ctgagccgaa gaaaactact gtgtcctgaa tcttttcccg
     1261 gcggaatctt gccagcggct ccacatattc ggccattatc cgcaggatcc ggccatcagg
     1321 gctgttgagg aagtccgggt tcaggtaggc gagctgtgcc ggctccagtt gccccggctc
     1381 aaaatcttgg tcgttctctg gatctgttgg ctttccgtta ctcatggggg aatcttttaa
     1441 cgcgggtttc ctcttccggg gtgtctgctt cggcaagctc aaggctcgct caacccgccg
     1501 aaacaagtcc aggcttacca atctgcgatc acaggatgtg ctggctaatt gctatttact
     1561 aattgctaat tacttaatca ccgccggtca tgatagtgta ccgcctccag cacacccagc
     1621 catatatcca ccacgcccag cccggatatg gcgccgcgca gaaaaccgtt ttgcaaaatc
     1681 acctgcagca gcgggaagcg catgatcagt ccgcgatcaa accagttggg cgcccacggc
     1741 aaagcgatga gcgtgagccc cagcgtcatg cagaaaagca cgtacaccac tacaaaggcg
     1801 cgttgcagcc acactggcgg caggtgctct tcctgctcgg ttggaggccc tgctgggctt
     1861 tcgagattag cggaggtaaa attcaaacgc cggggttttc ctgctgctca gtctcagttg
     1921 gtgctcagga tttcagagtt ttgatgcggc ttgccacgtc gcggaaatcg atattcgagc
     1981 cataaacttc catgaaattg gccagcgcag atttcttgtc gccaaaggcc tcgtaagcgg
     2041 agccaagatc ataataaatg gcgttgcggc tggagtcatc cagccccggc agatgcagcg
     2101 ccttctggta ccagcgtacc gcggcctcag gcgcgccctt atccaccagg cattgcgcca
     2161 gccacgtgta cgcctggatg ggttgagaga acttgtgccc ctggtctatg ccgcggcaga
     2221 ccttctgcag ctctccaatc gcttcatcca gcagccccat ctccttgacg gcgatcccaa
     2281 ggttatagtg cgtttccgga tcttcttcgg ccgcagtggg ttcggcggtc tcatcctgca
     2341 ggtcggccag gatgtcattc agcatggaag ccgcttctgc ttccttcatt ccaccattgc
     2401 tgtacgccgg cttggtcgcc atcgccgcaa ccggttcggc cttggcagcc gccaaccctg
     2461 gcgctggtgt gctcgcggca ggctcggcct tcggcttggg cgcgaagtcg gcgaggtcgc
     2521 cgccctccag atcgtgaatg aagtcggtga ggatgtcctc ggtcgagtgt gctgccggtt
     2581 cggcgaacat cggctgcgca gcggcgtggg ccacagcttt cggcattgac cgcggcgtct
     2641 cttgctcaat ctcaaaaatg tgttcggtta cagcgctctc tgccggagct tctttggtcg
     2701 cagtaaatgc caccggctcc gcttcaaccg gctccggctc tgcttcaaca acaatctccg
     2761 gctctggctg aatcgccggc gttcgcggtg cgggggcagc gaacggtgga ggcaggaaat
     2821 ccacattggc cgctgagtca agcgccgtcc cggcaaatgc ctcgctggct tgcattgtcg
     2881 tggcaggctg ggattgtcct gcggccacgg ctgcgatgag ttccggcagc tccgccgcgt
     2941 cgggcgccat ctctgcaagc tcgtcaatgg ccttcttcgc cgccggccac atctgctgcg
     3001 agatgtaaaa ctgtatctcc tggaccttct cgtcgttgcg gtagcaaacg cccgagccac
     3061 cctgcggctc ctcaattact tcaggttctg gctccggcgc cggttttttc acgccgtgta
     3121 cgggtgcgga ttgcgcaaat ggatccttga acgcaggacg cgattttgcc ggcgctggcg
     3181 gcggtggcgg agccgccggt gcttctgctt ccaccggctc caccgtgatc atgctctccc
     3241 attcgttgga gagatcaatc tcctccgttt gcggcgcaat ggccaccggc tcaatctcaa
     3301 cttccggctc gtgtgccgcg gccatcagtt ccatctcaac cggacgcggc tcttcgtgga
     3361 cgacctcgta cgtctgcgtg acctcatgct ccaccacgat ctggtcgggc atgtcgaagc
     3421 tgaactcttt tattgatggc tccgccatgg agggctcggc cgccacgctc tgcttgttta
     3481 tggccggccc gctcgtcgtg gcttccgtag gcgtcaccag caggggatgg attgcggctt
     3541 gcggctggac cgcggatggt tccagcaacc ctgcgcctga gcggacagga agctctgccg
     3601 caggcgcggc cggtgcaatg ccgcctccac gcaacgcata tcgttttgac gcctctgcat
     3661 acttggccga ttccttgtca tggccaagct cgcgatagac ctcggccagc gtcttgcaca
     3721 cccgtgctgc gtcaggccag cgctccgccc gggcgtataa cgttgcgagt cgctggttca
     3781 gcgccacgtc atgcggcgcc agcggcaacg cggcctcaag cggcggaatc gccttggaag
     3841 gcacgttgta agacacaaac agctcagcgt ccgtgagcgc agactcaatc gcagtctcgg
     3901 ttggcggatc gtatttctgc tggaccaggg tgttgctctc gtccagctct tccaccatga
     3961 aagcctgggc agcctcttcc ggactcagga tgcgcgacgc ggaatcctca cccagcttgc
     4021 tcagcatctg cttgtagttt tgcgcatgca ggctgttttc cggttcaatc tcagaaagcc
     4081 ttttgtagag atcgcgcgcc tcggcgaacc ctcccttttt ggcaaaagcg tgcgcctgca
     4141 tctccagcac ttccgcgctt tcagcgctct ggccggtgcc gcccatcagg cggttcaagc
     4201 tgctcagtgc ctccgggttg tcccttacct gatc
//
LOCUS       DASQYP010000416         2568 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_145821, whole genome shotgun sequence.
ACCESSION   DASQYP010000416 DASQYP010000000
VERSION     DASQYP010000416.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 2568)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2568)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2568
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_145821"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..434
                     /gene="cmk"
                     /locus_tag="VE783_13510"
     CDS             <1..434
                     /gene="cmk"
                     /locus_tag="VE783_13510"
                     /EC_number="2.7.4.25"
                     /inference="COORDINATES: protein motif:HMM:NF014300.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004127 - cytidylate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0015949 - nucleobase-containing small
                     molecule interconversion [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="(d)CMP kinase"
                     /protein_id="HYX54469.1"
                     /translation="VTESVRRQEVTDAASRVSVHPGVREWMVAHQRAMGTSGGIVMEG
                     RDIGTKVFPDAEVKIFLDAAPEVRGARRFQQDAATAVKEASVIAELRARDERDRTRAN
                     SPLEPAQDAVHIDSTKLTLDEVFARAVEIIEEKLAHKSVAG"
     gene            complement(538..1317)
                     /locus_tag="VE783_13515"
     CDS             complement(538..1317)
                     /locus_tag="VE783_13515"
                     /inference="COORDINATES: protein motif:HMM:NF012334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HYX54470.1"
                     /translation="MENRVAVVTGASRGVGKGVALELGHAGFTVYITGRSAADMGYIQ
                     GRGTAIVCDHCDDQQVERAFAQIGHEQNRIDVLVNNAWGGYENMIENGEFTWSRPFWQ
                     QPVWRWDAMFHAGVRAAYVASRLAAPFMILKRSGLIVNISFWSAQKHIGNVAYGVAKA
                     ATDKLTSDTALELKEHNVAAVSLYPGLVRTEKVMAAAEWLNLSNSESPEFTGRAVVAL
                     ANDNGALCKSGKILTVAALAHEYAFTDIDGKLPRPLTLADV"
     gene            complement(1504..>2568)
                     /locus_tag="VE783_13520"
     CDS             complement(1504..>2568)
                     /locus_tag="VE783_13520"
                     /inference="COORDINATES: protein motif:HMM:NF024743.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4097 family beta strand repeat-containing
                     protein"
                     /protein_id="HYX54471.1"
                     /translation="IGDHIRIDDNDADDVFGFLGGSSYDFTNQFSQPASGATQFKIIC
                     NRAEIKVSASHDADAHAVIQKKIRSESQSAAEQINEQTKAHFEPQGSIMVLDMTSGAF
                     DRGRYDMDLEIPRGAALSITSRNGNITVNDRTGNVELSTDHGDVSVDQVKGDAALHLR
                     KGNATVRNVSGNLTLDGVVQDSDLSDIGGSVTLTGTYWGDMRMARIAKPVRFTSTRTD
                     MQFNKLDGEFNMQPDDLRANGITGPFRMDTRSKSIHLEDVSGDIHIQNRNAPVELQLK
                     SPLGALDVNSVHGEISVEVPANSAFQLDAQSLSGEIETDFGMNVDNSGRDAAVKGNVG
                     KGGPEMRLRADHGKIEVRKR"
BASE COUNT          536 a          690 c          746 g          596 t
ORIGIN      
        1 atgtgactga gagcgttcgg cgccaggaag tgaccgatgc tgcttcaagg gtttctgtgc
       61 atccgggggt gcgcgagtgg atggtggcgc atcaacgcgc aatgggtacc agcggcggga
      121 ttgtgatgga aggccgcgat atcggcacca aagtttttcc tgatgcggaa gtaaaaatct
      181 ttctcgacgc tgcaccggag gtgcgcggtg cgcgacgttt tcagcaggat gccgcaacgg
      241 cagtaaagga agcaagcgtg attgcagagt tgcgggcccg ggacgagcgc gaccggacgc
      301 gggcaaactc cccgcttgag ccggcgcagg acgccgtgca tattgattcg acgaaattga
      361 cgctcgatga agtgtttgcg cgcgccgtgg agattattga agaaaaattg gcccacaaga
      421 gcgtggcagg gtgagaaacg ttagctgtca gcggtctaag gatgtgatcg caatcggttt
      481 gcagcgacga ttaaggttga attgaatcaa tcaaggaaat ttggcgaccc accagcatta
      541 gacgtcagcc aaggtaagtg gtcgcggcaa tttaccatcg atatcagtga aggcgtattc
      601 atgcgccagc gcggctacgg taagaatctt tcctgatttg caaagagccc cattatcgtt
      661 ggccaatgcc accaccgctc ttcctgtaaa ttctggcgac tctgagttgc tcaggttgag
      721 ccactctgcg gctgccatta ctttttctgt cctgaccagt cccggataaa ggcttactgc
      781 cgcaacattg tgctctttaa gttcaagcgc agtgtctgaa gtcaatttgt cagtagcggc
      841 tttggcaaca ccataagcga cattgcctat atgcttctgc gccgaccaga aagaaatatt
      901 cacaatgagt ccgctgcgtt tcaggatcat gaacggcgct gccaaccggc tggccacata
      961 cgcggcccgg acgcccgcat ggaacattgc atcccagcgc cacacaggtt gttgccagaa
     1021 tgggcgtgac caggtgaact cgccgttctc gatcatattt tcgtatccac cccaggcatt
     1081 gttcacgagc acgtcaattc ggttttgttc gtggccgatt tgcgcaaatg cacgctcaac
     1141 ctgctgatcg tcgcaatgat cacacacgat cgcagtgcct ctgccttgaa tgtagcccat
     1201 atcggcggcg cttctgcctg tgatgtatac cgtgaatccg gcgtggccaa gttcaagagc
     1261 aactcccttt cctactccac ggctggcgcc cgtcacaaca gcaacacggt tttccatgcc
     1321 cttgtgtata cagaaggtgc tcagaagcgt caaacaccgg ttttaccagg agagcaggag
     1381 tcctcaagtc cctcacattg tcccggtcgg tccggtctgg accgcatctc ccagcgtttc
     1441 aaacagtgga aaggagttga agccgttgaa atgcaaccgg atcgcgagat cagcattcgc
     1501 aagtcagcgt tttcttactt caatcttccc atgatcggcg cggaggcgca tctccgggcc
     1561 gcctttaccg acgttaccct tgacggctgc gtcacggcca ctgttatcca cgttcatacc
     1621 gaagtcggtt tctatttcgc cgctcaggct ctgcgcgtct aactggaagg cggagttggc
     1681 tggcacttcc acgctgattt cgccgtggac ggagttcacg tccagcgcgc cgagagggga
     1741 cttgagttgc agctcgacag gggcgttgcg gttctggatg tgaatatcgc cgctcacgtc
     1801 ttccagatgg atggatttgc tacgagtatc catgcggaag gggccggtga tgccgttggc
     1861 acgcaggtca tcgggctgca tgttgaattc gccatcgagc ttgttgaact gcatgtccgt
     1921 ccgggttgac gtgaagcgaa ccggctttgc gatgcgggcc attcgcatgt caccccagta
     1981 agtgccggtg agagtcaccg agccgccgat gtcggaaagg tcgctatcct gcaccacgcc
     2041 atcaagggta aggttgccgc tcacgttccg tacagtagcg ttgcctttac ggaggtggag
     2101 agcggcgtct ccttttacct ggtcaacgct cacatcgccg tgatccgtgc tgagttccac
     2161 gttgccggtg cggtcgttca cggtgatatt tccattgcga gaggtgatag agagagccgc
     2221 gccgcgggga atctcgagat ccatgtcata gcggccgcga tcgaaggcgc cgctcgtcat
     2281 gtcaaggacc atgatgctgc cctgcggttc gaaatgggcc ttggtctgct cgttaatttg
     2341 ctcggccgca gattgcgatt cactacgtat ttttttctgg atcacggcgt gcgcatccgc
     2401 gtcgtggctg gccgagactt tgatctcagc tcgattgcag atgatcttga actgcgtggc
     2461 gccagaggcc ggctgagaga actggttggt gaaatcgtag ctggagccac cgagaaaacc
     2521 aaagacgtcg tcggcatcgt tgtcatcgat gcgaatgtgg tctccaat
//
LOCUS       DASQYP010000417         2019 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_145934, whole genome shotgun sequence.
ACCESSION   DASQYP010000417 DASQYP010000000
VERSION     DASQYP010000417.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 2019)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2019)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2019
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_145934"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            681..1607
                     /locus_tag="VE783_13525"
     CDS             681..1607
                     /locus_tag="VE783_13525"
                     /inference="COORDINATES: protein motif:HMM:NF033516.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS3 family transposase"
                     /protein_id="HYX54472.1"
                     /translation="MRSVEQAQEHLSIESMCGLARVSRAGFYRDWEQCEPEVEGMELR
                     TQIQQIVLAHRRCYGYRRVTKDLKDQGWRVNHKRVVRMMAEDNLLAVRRRKYIVTTES
                     EHDLPVFRNLAATLKLSGINQLWVADITYIRLREQFLYLAVVLDAFSRRVVGWALDES
                     LDASLITAALRKAIAERKPGFGLVHHSDRGTQYASHDYIALLEEHGIEPSMSRAGRPY
                     DNAMCESFIKTLKREEIYIRQYRDRIDLELHIAEFLEQYYNRRRLHSALGYRSPESFE
                     RSLQPYQDTGQMSFFRHEEIYRSDVGCNQERP"
BASE COUNT          458 a          538 c          612 g          411 t
ORIGIN      
        1 attagggaaa tcccgtcaca gtaggtaaag cggggtgacg gatcgccggc cgttgtaggc
       61 ttgccgtttg gccggctggt ggagggctcg caggtggttc gttcggtcgc tccagcagct
      121 tactttatag cacgaacaaa ccacgaaagc aagagctttc ttctccacgc aaagactttc
      181 tgctcttcgt gggttttatc gaattgaaaa ctgtttgcat tttgtcatgt tgagcgaagt
      241 cggagcgatc ccgcgtagcg ggaggagtga ggacgagtcg aaacatcccg agaatgtctc
      301 cgctgtggaa tgacccccta aaatgagaca tcaaggaaac tcccccagga gcagcgaatg
      361 gaacgtggga agagataccg acggtggagt tgggaagaca agcgacgagc tgtgaatcgg
      421 atgaagagtt gcagtccgca gaagttggcg gacgaactgg gcattcacaa gcggcaactg
      481 tatgaatggc gggaccagtt gcggcagcat agagggctgc cgcctacgcg ggaagagcag
      541 ctacgccggg agaatcagca gctgcgagcg gccctgggca ggaaggcgct ggaagtggat
      601 ttcttgcaag gtgccttgcg aagaatcgag gctcgacgcc aagccaacga cggcagtggc
      661 gaaactgcat ctacgaagaa atccgaagcg tagagcaggc gcaagaacac ctcagtatcg
      721 agtcgatgtg tgggttggca agagtcagcc gcgccggctt ttatcgcgac tgggaacagt
      781 gcgaacccga ggttgaaggc atggaactgc gaactcagat ccagcagatc gtgctggcac
      841 accgccgctg ttacggctac cgccgggtga ccaaggacct gaaagaccag ggatggagag
      901 tcaaccacaa acgcgtggtg cggatgatgg ccgaagataa cctgttggcg gtacgcaggc
      961 gcaagtacat cgtgaccaca gagagcgagc atgatttgcc tgtatttcgc aacctggcgg
     1021 ccacgctgaa attaagcgga atcaaccagc tgtgggtggc cgacatcacc tatatccgtc
     1081 tgcgcgagca gtttttgtat ttggcggtgg tgctggatgc tttttcccgg agggtggtgg
     1141 gctgggcgct cgatgaatcc ctggatgcct ctttgatcac tgcagccctg cgcaaagcga
     1201 tcgccgaacg caagcccggg tttgggctgg tacatcattc cgaccgtggc acgcaatacg
     1261 cttcgcacga ctatattgcg ttgcttgagg aacacggcat cgagcccagc atgagtcgcg
     1321 ccggtcgtcc ttacgacaat gccatgtgcg agagcttcat caagacactg aaacgggagg
     1381 aaatctacat tcggcagtat cgagatcgca ttgatctgga actgcacatc gctgagtttt
     1441 tggagcaata ctataaccgg cgtcggttgc attcagctct gggctatcgc tcgccggaaa
     1501 gtttcgaacg tagcttgcag ccgtaccagg ataccggaca gatgagtttt ttcaggcatg
     1561 aggaaatcta tcgttccgat gtgggttgca accaggagag accatgagcc tctcctggcc
     1621 ccatcggtgc gatgagtttc cagctgagta ttccttggcg agttgctctc cagcagagcc
     1681 cgcctccgct tcctcagctg cttcatcctg caaccaacaa cctccgttcg tcgagctaag
     1741 ttcagtgaac ggtaaccggg gagttcctgc actgtctcac cctagggggt cgctccattg
     1801 tccataccgc atcagggagt tctcacattg ccttgtctcc tcagcgccgt taggcgcgtc
     1861 gcgcagctca gcggagcgac aagggaattt ctacagcctg ggtccaccgg ttcgccctcc
     1921 agagcactcc aaacacgcat tcgtgaaccc ggcggagagc tctcgcccgc tcgcgcagcc
     1981 acgggcctgt tgcgccgcat ggccgaagaa gccaggact
//
LOCUS       DASQYP010000418        10700 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_211355, whole genome shotgun sequence.
ACCESSION   DASQYP010000418 DASQYP010000000
VERSION     DASQYP010000418.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 10700)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10700)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10700
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_211355"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1741)
                     /locus_tag="VE783_13530"
     CDS             complement(<1..1741)
                     /locus_tag="VE783_13530"
                     /inference="COORDINATES: protein motif:HMM:NF012234.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease ATP-binding subunit"
                     /protein_id="HYX54473.1"
                     /translation="MFERYTEKARRVIFFARYEASQFGSPYIETEHLLLGLLREDKAL
                     TNRFLRSHTSVESIRKQIEGHTTIREKVSTSVDLPLSNECKRVLAYAAEEAERLSHKH
                     IGTEHLLLGLLREEKCFAAEILHERGLRLSAIREELARSTQEKAQPQRGQSRESSLLS
                     EFSRDLTQAAMDTQLDPLVGRDGEVERVVQILCRRTKNNPVLIGEPGVGKTAIVEGLA
                     QRIADGDVPSFLADKRILALDLSLIVAGTKYRGQFEERLKTIMKELMENQNCIIFIDE
                     LHTLVGAGSAEGSLDAANILKPALSRGEIQCIGATTPGEYRKSIEKDRSLERRFQAVK
                     VPPPNEAEAVKIIYGIKERYEKFHAVTYTDDAIQFAVYHSNRYIPDRFLPDKAIDLLD
                     EAGARVKLRQTSLPEEITEVQKRIKFIVHRCENAVANHEFEKARFYSDEERKERENLR
                     ALREKYHLDESSTGVVNREDIEEVVSRWTGVPITSIKEEETQKLLRVEEELHKRVISQ
                     DKAISALARSIRRSRAGLKSPNRPIGSFLFLGPTGVGKTTLRAKVEQLLLQQAPSDSG
                     RLPFVSVEVPPPHT"
     gene            complement(1920..2636)
                     /locus_tag="VE783_13535"
     CDS             complement(1920..2636)
                     /locus_tag="VE783_13535"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HYX54474.1"
                     /translation="MHPIEQSPEILSVTGLKKVYKSGQTDLVLFENLTFRVRKGEMLA
                     IVGESGAGKSSLLHILGTLDRASAGTVNCAQNQLDKLSEEAAADFRNREIGFVWQFHY
                     LLPEFTALENVAMPLLMRSGAYRQSLEKARDWLQEVGLEDRGHHRAGELSGGEQQRVA
                     LARALITGPSILMADEPTGDLDDRTAEMVFGLIQRLHREYQLTSLIVTHNLAFARRCD
                     RVLRMYRGKVEEVPPGSLTQ"
     gene            complement(2861..4138)
                     /locus_tag="VE783_13540"
     CDS             complement(2861..4138)
                     /locus_tag="VE783_13540"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HYX54475.1"
                     /translation="MKFELYVAARYLRAKRRQAVIGVITGISIIGVAAGVASLIVALS
                     INSGFQRDLQNQLLGASAHVRLEKLKADGIYDWRPLLEKMQKQPHVIAASPALYEEVL
                     AARGPRASGMQLKGVIPEYENRVSELLKSVKFGSAAPLSPAPSPTPCPQGSSDDCSGP
                     APYPPIVVGKDLAESIGASVDSIITVTSPQGELTPFGIVPKYERFRVVGIFNSGFYSF
                     DSTWGLIRLTDCQRLYGLGDVISVIEFRVDDLYKAEQIGNQLQAAAGPEYLAKSWMEE
                     NRALFRALSLEKVVTFLTIGLIVFVAALNILISLIMMVMEKTKDIAVMVSMGARRRQV
                     RRIFIFQGVLIGLIGTFLGLVIGYGVALAGAKYHFIALNPEVYSISYVPFAPRVLDGV
                     LVSVVSLLISFVATLYPSWSAARVLPAEALRYE"
     gene            complement(4148..4765)
                     /locus_tag="VE783_13545"
     CDS             complement(4148..4765)
                     /locus_tag="VE783_13545"
                     /EC_number="2.1.1.100"
                     /EC_number="2.1.1.334"
                     /inference="COORDINATES: protein motif:HMM:NF016107.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isoprenylcysteine carboxylmethyltransferase
                     family protein"
                     /protein_id="HYX54476.1"
                     /translation="MEAKLLLIPWMAAVIYSSIPLFWFAIHPFAARWRRMKRSPYRVL
                     LPLWAVLIAAEAFLTWPWHSVQVYSSLWGWIPATFLSFYGLVTYKRIFSGFGGHKLSG
                     EAELRREEHEQQLVTTGLHASMRHPIYFAHLCEMAGWTLMSGLAVNYVLLGVSALITF
                     PIMIALEDRELEARFGQSYRDYRSRVPAVIILPWKGRRLEQSTSH"
     gene            5222..5617
                     /locus_tag="VE783_13550"
     CDS             5222..5617
                     /locus_tag="VE783_13550"
                     /inference="COORDINATES: protein motif:HMM:NF013970.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system VapC family
                     toxin"
                     /protein_id="HYX54477.1"
                     /translation="MTGLDTNIIVRYLTQDDPVQSRKAADIIERRLSVSNPGFVSVVT
                     TAETVWVLDRAYRFTAKEIAAAVERMLQVEVLLIQHEQQVFTAMVALKQGRSSFSDAL
                     IAELGAHEGCNHTLTFDQKALRFSRFRLA"
     gene            complement(5763..6362)
                     /locus_tag="VE783_13555"
     CDS             complement(5763..6362)
                     /locus_tag="VE783_13555"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX54478.1"
                     /translation="MHAEFVPGADFAHGSVANNEHLVSKQIEFLLDDLESAFFGEQVA
                     AIGEKDFVNCRMILKAKRSDFLSLNLWLSEGDDKNLHVARVQHVEQRDGSAERSEFTD
                     GTMEVGVASGPADFIDIGCAEVTADGRVNVAEHGIVVKGAHTGAIDGFNISLEPSFDH
                     GFGGMAVRRADTLTEAVVERVVKVEDDAADEGFSLDLLS"
     gene            complement(6591..8798)
                     /locus_tag="VE783_13560"
     CDS             complement(6591..8798)
                     /locus_tag="VE783_13560"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX54479.1"
                     /translation="MKKFISAFFLFACIALAWAEGTRQWRETGYDEFERGAARGVAIR
                     STGQLELAPAFKVLNTTPSTFIWHIAADRDGTVYAATGAPARVYRVTPDGKSTVIFEP
                     KELQVQTIAIGRDGALYAGTSPDGKVYKLVRKAAPQGGAAAPAEYTASVFFDPGTKYI
                     WDLAFDPQGQLYVATGDTGSIFRVDQNGKGTVFFKSDEAHMRVLAFDPKGNLIAGSDG
                     GALIYRITPAGEGFVLYAAPRKEITALAVDNAGNIFAAATGEKRSGQQNVGAPAPLNQ
                     PAQPVTAPFVGNVNLGGSDIFQIAPDGSPRKLWSSREDVVYAMEFDGNGRLIAGTGNK
                     GRLYAIDRNGVFTDLVKASASQVTSFSKAPNGGLYCSSSNLGKIFLLSSALEPEGTFE
                     SDVQDAKIFSRWGRAEVRARGAFELFARSGNVDNPDRNWSPWTRIDLSKDARLEVPPA
                     RFVQWRAVLKPANPSTEIDEVVVNYLPKNVAPVIEDVVVQPGARFQPVSHGSGPETIN
                     INLGIQPQPLIGRVDSVPTANREHGFVAVRWGAHDENDDNLVYSVYYRGENEREWKLL
                     KSGLQDKFYSFDSGLLPDGGYFVKVAASDAPSHTPEEALSDERVSGRFEVDNTAPRIE
                     NLAARVEGQGIHVTFHATDDFSPIRRAEFSVDAGDWQYVEPVGQLSDSKTENYDFTTL
                     LNNVMQQQDVTLDQKRGKGKQAPPPATVSGEHVVVVRVYDRYDNVATAKVVVR"
     gene            complement(8937..>10700)
                     /locus_tag="VE783_13565"
     CDS             complement(8937..>10700)
                     /locus_tag="VE783_13565"
                     /inference="COORDINATES: protein motif:HMM:NF017400.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SpoIVB peptidase S55 domain-containing protein"
                     /protein_id="HYX54480.1"
                     /translation="VSLAAAQTRPNSNSSLQKPAQRTQVMSVDDVQVGMKGVAYTVFQ
                     GTQPESMGVEVLGVLKNFNGPKSDVVLVRLKGEKAEYTGVVAGMSGSPVYIDGKLLGA
                     IAYRIGQFSKEPIAGVTPIQQMLEINEFDTSIPQQGASAAKPQAPQKTSTSGNVETPV
                     AQGMTQYLQPIDSPFVFNGFTEASLQQFSSQFASAGIAPVMGVGSSSGMKQPEPLVPG
                     SAVSAILVRGDMDVAATCTVTYMDAEHLLACGHPLTQYGMVDMPMTKANVIATLPSPL
                     NAFKIVNTTEPVGAFVQDRKTGIMGRFEREPQMIPVTLSIHGPSGPREYHYEVLNNPK
                     LTPLMMMATVYNALMGMNQYGEETTYRMNGKIHVNGFPDVRMTNMFSPTDTQPTAVAV
                     AQALGDRFGRIYENPFQAPTVQGVALDFDLERDRHSAVLENARTDMTEARPGDEIMVE
                     AVLRPYRGERIVRRIPVRVPTSVPKGSLRILVSDADTLDRARKGNGAGRSLDLNSTIE
                     LLNKEHQNDHLYVSLLEPNPQATVEDKVMPGVPLSVMNVMEGMRATQQMVVFNESAVN
                     ESSTPVGYVVSGSQIISLNIK"
BASE COUNT         2177 a         3232 c         3016 g         2275 t
ORIGIN      
        1 cggtgtgcgg cggcgggact tcgacgctga cgaagggaag gcggccggag tcggacgggg
       61 cctgctgcaa gagcagttgc tccaccttcg cgcgcagcgt cgtcttgccg acgccggttg
      121 ggccaaggaa caggaacgat ccgatgggcc ggttgggcga cttcagccct gcacgcgagc
      181 ggcggatcga gcgggccagg gcgctgatcg ccttgtcctg cgagatcacc cgcttgtgca
      241 gctcttcttc cacccgcagc agcttctgcg tctcttcttc cttgattgag gtgatcggca
      301 cgccggtcca gcggctgacc acttcttcaa tgtcttcacg gttcacaaca ccggtggaag
      361 actcgtccag gtggtatttc tcgcgcaggg cgcgcaggtt ctcgcgctct ttgcgctcct
      421 cgtcggagta gaagcgggct ttttcaaact catggttcgc caccgcgttc tcgcagcgat
      481 gaacaatgaa cttgatccgc ttctgcactt ccgtgatctc ttccggcagg gaagtctggc
      541 gcagcttcac acgcgcgccg gcttcgtcca gcaggtcaat cgccttgtcc ggcaggaacc
      601 ggtctggaat gtagcggttt gagtgataca cggcgaactg gatggcatcg tccgtgtaag
      661 ttaccgcgtg gaacttttcg taacgctcct tgatgccgta tatgatcttc accgcttcag
      721 cttcgttcgg cggtgggacc tttacagcct ggaagcggcg ctcgagtgag cggtccttct
      781 caatcgactt gcgatattcg cccggcgtgg ttgcgccgat gcactgaatc tcgccacgcg
      841 aaagagccgg cttgaggata ttggccgcgt ccagcgaacc ttccgccgaa ccggcgccca
      901 ccagcgtgtg cagctcatcg ataaagatga tgcagttctg gttctccatc agctctttca
      961 tgatggtctt gagccgctct tcaaactgtc cgcgatattt tgttcccgcc acgatcagtg
     1021 agagatcaag ggcgagaatc cgcttgtccg ccaaaaatga cggaacgtca ccgtcagcga
     1081 ttctctgggc caaaccttct acaatggcgg tcttgcccac gcccggctcg ccgatgagca
     1141 caggattgtt cttggtgcgc cggcacagga tctgtaccac gcgctcaact tctccgtcgc
     1201 ggcccaccag cggatcaagc tgggtgtcca tggccgcctg cgtcaggtca cgggaaaact
     1261 ctgaaagcag agaagactcg cgcgattgtc cgcgctgggg ttgggctttt tcctgcgtgc
     1321 tgcgcgccag ttcttcgcga attgcgctca ggcgcaggcc gcgctcgtgc aggatttcgg
     1381 ccgcaaaaca tttttcttca cgcagcaatc ccagcagcag atgctccgtg ccaatgtgct
     1441 tgtggctcag gcgctcggct tcttccgccg cgtacgccag cacgcgcttg cattcattgc
     1501 ttaatggcag gtccactgac gtggaaacct tttcccggat cgtcgtgtgg ccttcaatct
     1561 gtttccggat cgactccact gacgtgtggg aacgcagaaa gcggttggtc agcgctttgt
     1621 cttcacgcag caggccaagc agcaggtgct cggtttcgat atagggcgag ccaaactggc
     1681 ttgcctcata ccgggcaaag aagatcacgc gcctagcttt ttctgtatac cgctcgaaca
     1741 tgttaccctc accccagatg ccccggtcac ctctgcctga gcatctctct cttcccccgg
     1801 tacgaaccac cgtacttcca ggaagaagct ttccgtccgg cgtcacccgc cgaactcttg
     1861 tggccgccct tcagcaggcc aaaaaaccgt ttgtcccgtc cgctgctctc ctcattattc
     1921 tattgcgtca gagagccggg tggaacctcc tcgaccttgc cccgatacat ccgcaacact
     1981 cggtcacatc gacgggcaaa agccagatta tgggtgacga tgagggaagt gagctggtac
     2041 tcccgatgca atctctggat cagcccgaaa accatttcgg ctgtccggtc gtccagatca
     2101 cccgtcggtt catcggccat caaaatactg ggtcctgtaa tcagggcccg ggccaatgct
     2161 acccgttgct gctcgcctcc ggaaagctcg cctgcgcgat gatggccgcg gtcttcaagt
     2221 cccacttcct gcaaccaatc tcgggccttc tccagcgact gccggtaggc cccgcttctc
     2281 atcagaagcg gcatggcgac gttttccagc gccgtaaact ctggcaacaa atagtgaaac
     2341 tgccacacaa acccgatttc ccggttgcga aaatcggctg cggcctcttc actcagcttg
     2401 tccagctggt tctgcgcgca gtttacagta cccgcggaag cgcgatcaag agttcccagg
     2461 atatgcaaca aactgctctt cccggctccc gattctccca cgatcgcgag catttccccc
     2521 ttcctcaccc ggaaggtcaa attttcaaag agcaccaggt ccgtttgacc tgacttataa
     2581 acctttttca gcccagtcac actgaggatt tctggcgact gttctattgg atgcacttgt
     2641 gttccccaat ggtgcaacca gctatattcc tcagcatttt ccgtgccgtt tcaaatggga
     2701 aaacctcttc cccattgaaa caccggctgt gatctttaga ctctgccggc aaccttcgga
     2761 aactcctcaa gtttccatta aaaaagctaa ttaccgttaa tccagagttg ctgcttctca
     2821 gcatcttgca cctgcgcttt tgtccaaaca atgaggttta tcactcatag cgtagcgcct
     2881 ctgcgggtag aacgcgagcc gcagaccatg agggataaag tgtggcaaca aaggagatta
     2941 gcagcgaaac cacgctcacc aaaacaccat ccagcacccg tggcgcaaag ggcacgtaac
     3001 tgatggagta gacctcaggg ttgagcgcga taaagtggta ctttgccccg gccagggcca
     3061 cgccatagcc gatcaccaac cccaggaagg tgccgatcag gccgatgagc actccctgga
     3121 aaatgaagat ccgccgaacc tgtcgccgcc gcgcgcccat ggagaccatc acggcgatgt
     3181 cttttgtctt ctccatgacc atcatgatca gtgaaatcaa tatgttgaga gctgcgacaa
     3241 aaacgatcaa ccctatggtc aaaaatgtca caaccttttc cagcgagagt gcgcgaaaca
     3301 gcgcacgatt ctcctccatc cagctcttgg ccaggtactc aggcccggcg gcggcttgga
     3361 gttggttccc gatctgctcg gctttgtaga gatcgtccac cctgaactct ataacggaaa
     3421 taacgtcacc cagcccataa agccgctggc aatcggtgag ccggatcaat ccccaggtac
     3481 tgtcaaagct atagaaacca gagttgaaaa ttcccaccac gcgaaagcgt tcgtacttgg
     3541 gcacgattcc gaacggcgtg agctcgccct gcgggctggt tacggtgatg atcgagtcca
     3601 cggaagcgcc gatgctctcc gccaggtctt tcccgacgac aatcggtgga tacggcgccg
     3661 gacctgaaca atcatcagag ctgccctgcg ggcatggcgt cggagagggc gcggggctga
     3721 gcggcgccgc cgagccgaac tttaccgatt tcagtagctc gcttacccga ttctcatatt
     3781 cggggatgac acctttcaac tgcatgccgc tggcccgcgg cccgcgcgct gccagcactt
     3841 cttcgtagag agcgggagac gccgcaataa cgtgcggctg cttctgcatc ttttcgagca
     3901 gaggacgcca gtcatagatt ccgtcggctt tgagcttttc cagccgcacg tgcgcactgg
     3961 cgccgagcaa ctggttctgg aggtcacgtt gaaatcctga gttgatggaa agcgccacga
     4021 tcagcgacgc cactcccgcg gcgactccga tgatggaaat gccggtgatc accccaatga
     4081 ccgcctgtct ccgcttggcg cggagatacc gggcagccac gtagagttca aacttcactc
     4141 gggcgcctca gtgcgatgtg ctctgctcaa gccttcttcc tttccacggc agaatgatta
     4201 ctgctggaac ccggctgcgg taatcgcggt aactctggcc gaagcgcgcc tcaagctcgc
     4261 ggtcttccag ggcgatcatg atcgggaaag tgatcagcgc gcttacgccg agcaggacat
     4321 agttcaccgc cagcccgctc atcagcgtcc atccggccat ctcgcacaaa tgagcaaagt
     4381 agatcggatg acgcatggag gcgtgcagtc cggtggttac gagctgttgc tcatgctcct
     4441 cacgacgcag ctcggcttcg ccgctcagtt tgtgtccgcc gaacccagag aagatgcgct
     4501 tgtaggtgac aagtccgtaa aacgagagga atgtggcggg aatccagccc cagagcgagg
     4561 agtaaacctg aacgctgtgc cagggccagg taagaaatgc ctctgccgca atcagcaccg
     4621 cccagagagg aagcaaaaca cggtagggcg atcttttcat ccggcgccag cgcgcggcga
     4681 aaggatgaat cgcaaaccag aacaatggaa tgctgctata gatgacggct gccatccacg
     4741 ggatcagcag cagctttgcc tccatgcagt gattgtaaca ggcgaggatt gcttgccgcc
     4801 tgatcaggcc tccccggcat tcactgcttt tcagtgcatc ggcagggcga gcttgggatt
     4861 ccagaaaatc acaccttttt ctgccacccg gcagaagcca agccattctc gaccggattg
     4921 acggagatcg cggcgcgtgg tattacttct actcaaatgt aatgaagctg gaatcttcaa
     4981 ttacggtcaa gggacaggcc accatcccga aggaaattcg ccgccatctg aaactgaaga
     5041 ctggcgatcg cgtaaagttc tttctgcacc cggatggcag tgtcgtactc ctgccaaaag
     5101 taccggcgac ggcattacgg ggaatgcttc actccccgcg cccgcgggct gtgaccctcg
     5161 atgagatgac gagggcagcc gccgagagaa cccccagcgg tcgtgggcgg cagaagcgga
     5221 aatgaccggt ttagatacga acatcattgt ccgctatctc actcaggacg acccggttca
     5281 gtcgcggaag gcggccgaca ttattgaacg gcgcttgagc gtctccaacc ccggatttgt
     5341 cagcgtggtt acgaccgccg agaccgtgtg ggtcctcgac cgcgcctatc gtttcactgc
     5401 taaagagatt gccgccgccg tggaacgcat gcttcaggtt gaagtcctgc tgattcagca
     5461 cgagcagcag gtttttacgg cgatggttgc actcaagcag ggccgcagct cattttccga
     5521 tgccctgatt gctgagctgg gtgcacatga aggatgcaat cacaccttga cattcgacca
     5581 gaaggcgctt cggttctctc gctttcgctt ggcttaaagc atcgcaggca gaccggcgct
     5641 gaagtagagc aacttttcag ccgctgagtg gctgcttcga aatgcgagac gctcactagg
     5701 gccctgacaa tacttccctc tacaatgacc ggtttccaat aaccaggtaa cgcatgccca
     5761 gttcaggaaa gcaagtcgag agaaaacccc tcatccgctg cgtcatcttc gaccttgacg
     5821 acacgctcta cgactgcctc ggtcagcgtg tccgccctgc gcaccgccat gccgccgaag
     5881 ccatggtcaa agctgggctc aagggagatg ttgaagccgt ctatcgcgcc cgtatgcgcg
     5941 cctttcacca cgatcccatg ctccgccaca ttgacccggc cgtctgccgt cacttcggcg
     6001 caaccaatgt cgatgaaatc agccgggccg ctcgcgacgc ctacttccat tgtcccgtcg
     6061 gtaaactcac tccgttccgc ggaaccatcc cgctgctcaa catgctgcac gcgcgcgacg
     6121 tgaaggtttt tatcgtcacc ttcggagagc cagagattca gcgagagaaa gtcagatcgc
     6181 ttggccttga gaatcatcct gcaattgaca aaatcttttt cgccgatcgc agcaacctgc
     6241 tcaccaaaga aggcgctttc cagatcatcc agcaggaact cgatctgctt gctgaccagg
     6301 tgctcattgt tggcgaccga gccatgagcg aaatccgcgc cgggaacgaa ctcggcatgc
     6361 acactgtccg catccgtcgc ggcgagttcg cctcgcagga cccgcagagc agggaagaag
     6421 aggccgatta tgaggtaaag aacatctcag aggtaagaag actcccgttc gaatggggat
     6481 cgccggcgtt tgccttgtcc agagcgaagc gagggagccc tatcacccct gcaaaaaaga
     6541 aagggtgatc attcttccga tcacccaatc gcccagatca cccgatctcg ctatctcaca
     6601 accaccttcg ctgtcgccac attgtcatac cggtcataca cccgcaccac cacaacgtgc
     6661 tcgccgctca ccgtggctgg cggcggagct tgcttgccct tgccccgctt ctggtcgagc
     6721 gtcacgtcct gttgctgcat cacgttgttt agaagcgtgg tgaagtcata gttttcggtc
     6781 tttgaatcgg atagctggcc taccggctcc acgtactgcc agtcgcccgc atcaactgaa
     6841 aactcagccc gccggatcgg cgagaagtca tccgttgcat ggaaggtgac atgtattccc
     6901 tggccttcca cccgtgctgc aaggttttca atgcgtggcg cggtgttgtc cacttcaaag
     6961 cggccgctca cacgctcgtc actaagcgct tcttccgggg tatgcgacgg cgcatcgctg
     7021 gccgccacct tgacgaaata gccgccatcc ggcaaaagac cggagtcgaa ggaataaaat
     7081 ttatcctgca gtccggactt cagcagtttc cattcgcgct cattttcgcc ccggtagtac
     7141 accgagtaga cgagattatc gtcattctca tcatgcgcgc cccagcggac ggccacgaag
     7201 ccatgctcac ggttggcggt tggaaccgaa tccacgcggc cgatgagcgg ctgcggctgg
     7261 atccccagat tgatgttgat ggtttccggg ccgctgccgt gtgacaccgg ctggaaacgc
     7321 gcaccgggct gcaccaccac gtcttcaatc accggcgcca cgttcttggg cagatagttg
     7381 actacaactt catcgatttc cgtggaaggg ttcgccggct tgagcacggc gcgccactgc
     7441 acaaaccggg cgggtggaac ttcaagccgt gcatctttac tcaagtcaat ccttgtccat
     7501 gggctccaat tgcggtcagg attatcgacg ttgccgctgc gagcaaacag ctcaaaggct
     7561 ccgcgggcgc gaacttcggc ccggccccag cgggaaaaga tctttgcatc ctggacgtcg
     7621 ctttcgaatg tgccctcggg ttccagcgcg ctgctgagca ggaagatctt gcccaggtta
     7681 ctgctggagc agtagaggcc gccattgggc gccttgctga aagaagtcac ctggctggca
     7741 ctggctttta ccagatcggt aaagacgccg ttgcggtcga tcgcatacag gcggcctttg
     7801 ttgccggttc cggcgatcag ccgtccattc ccatcgaact ccattgcgta gaccacgtct
     7861 tcgcgtgaag accaaagctt acgcggggag ccgtccggcg cgatctggaa gatatccgag
     7921 ccgccaaggt tgacgttgcc aacgaagggc gcggtgaccg gctgtgcagg ttgattgagc
     7981 ggggcaggcg ctcccacgtt ttgttgcccg gaacgcttct cgccggttgc ggccgcaaaa
     8041 atattgccgg cattgtccac ggccagcgcg gtgatttcct tgcgcggcgc ggcgtagagc
     8101 acaaagccct cgcctgcagg agtgatgcgg taaatcagcg cgccaccatc ggagccggca
     8161 atgagattcc ctttgggatc gaaagccagc acgcgcatgt gcgcttcatc cgacttgaag
     8221 aagactgtgc ctttgccgtt ctggtcgacg cggaagatgc ttccggtgtc gcctgtcgca
     8281 acgtagagct gcccttgtgg gtcaaatgcc aggtcccaga tgtatttggt tccgggatcg
     8341 aagaacacgc tggcggtgta ttccgcaggc gcggccgctc cgccctgcgg cgctgctttg
     8401 cgaaccagtt tgtagacctt gccgtccgga gatgtgccgg cataaagcgc gccgtcacgg
     8461 ccaatcgcaa tcgtctgcac ctgaagttct ttgggttcga agatgaccgt ggatttgcca
     8521 tcgggcgtta cgcggtagac ccgcgccggc gcgccggtgg ctgcataaac ggttccatca
     8581 cggtcggcgg caatatgcca gatgaatgtg gaaggcgtcg tattcaggac cttgaaggcc
     8641 ggcgcgagtt cgagctgtcc ggtgctgcgg atggccacgc cgcgggcagc gccgcgttcg
     8701 aattcgtcgt atccggtttc gcgccactgc cgggtgcctt ctgcccaggc cagggctatg
     8761 catgcaaaca ggaaaaaagc agagatgaat tttttcattt cgttccgagt actgattatt
     8821 tcaagattaa caggcacagg cggtgcagga aaatccgcag agagagcgtg agtgtgcggt
     8881 gcggagagaa aaaagtttgt cccggccgga ggccgggaca gtccaatgat tcgttgttac
     8941 ttgatgttca ggctgatgat ctgcgatccg cttaccacat agccaaccgg tgtggaggat
     9001 tcattgaccg cggactcatt gaagaccacc atctgctgcg tcgcccgcat tccttccatc
     9061 acgttcatca cggagagcgg cacaccgggc atcaccttgt cttccacggt ggcctgcgga
     9121 ttgggctcca gcagcgaaac atagagatga tcgttctggt gctccttgtt cagcaactca
     9181 atcgtcgagt tcagatcaag gctgcgtccg gcgccgttgc ctttgcgtgc gcggtccagg
     9241 gtgtcagcat cgctgaccag gatgcgcagc gagcctttag gaactgaggt cggcacgcgc
     9301 accggaatcc ggcgcacaat gcgctcaccg cgatagggcc gaaggacggc ttccaccatg
     9361 atctcgtcgc cgggacgcgc ttccgtcatg tcagtacgcg cgttctccag cacggcagag
     9421 tggcggtcgc gctcgagatc gaaatccagc gctacgccct gaaccgtcgg cgcctggaac
     9481 ggattctcgt agatgcggcc aaaacgatcg cccagcgcct gcgctacggc gacggcagtg
     9541 ggctgcgtgt cggtgggcga gaacatgttg gtcatgcgca cgtcagggaa gccattcacg
     9601 tggattttcc cgttcatgcg ataggtggtt tcctcgccgt actggttcat ccccatcagg
     9661 gcgttgtaaa ccgtggccat catcatcagc ggcgtgagct tgggattgtt cagaacttcg
     9721 tagtgatact cacgtggccc gctggggccg tggatgctga gcgtcacggg aatcatctgc
     9781 ggttcgcgct cgaagcggcc catgattccg gtcttacggt cctgtacgaa agctcccacc
     9841 ggctcggtgg tgttgacgat cttaaacgcg ttgagaggag aaggcagcgt agcgatcacg
     9901 ttggccttcg tcatcggcat gtccaccatg ccgtactgcg taagcggatg gccgcaggcc
     9961 agcaggtgct ccgcatccat gtaagtcaca gtgcaggtgg cggctacgtc catatctccg
    10021 cggacgagga ttgcgcttac cgcggatccg gggaccagcg gctcaggctg cttcattccg
    10081 ctggaggagc ccacgcccat caccggagcg attccggcgg aggcaaactg tgaagagaac
    10141 tgctgcagcg aggcttccgt aaatccgttg aacacgaacg gggagtcgat gggctgcaga
    10201 tactgtgtca tgccctgcgc cacaggtgtc tccacgttcc ctgacgtgct ggtcttctgc
    10261 ggggcctgcg gtttggccgc ggacgctccc tgctgtggga tgctggtatc gaactcgttg
    10321 atctccagca tctgctggat cggcgttacg ccggcgatcg gctctttgga gaactggcca
    10381 atgcggtacg cgattgctcc cagaagcttg ccatcgatgt aaaccgggct gccgctcata
    10441 cccgcaacca cgccggtgta ttcggccttc tcgcccttca ggcgaaccag gaccacgtcg
    10501 ctcttgggac cgttgaaatt cttcaacacg ccaaggactt ccacgcccat gctttcaggc
    10561 tgcgtaccct gaaacaccgt gtaagcgacg cccttcatgc ccacctgaac atcatccacg
    10621 gacattactt gtgtccgctg cgcgggcttt tgaagggaag agttggagtt gggacgagtc
    10681 tgtgcggcag ctagactcac
//
LOCUS       DASQYP010000419         2269 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_253326, whole genome shotgun sequence.
ACCESSION   DASQYP010000419 DASQYP010000000
VERSION     DASQYP010000419.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 2269)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2269)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2269
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_253326"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1057)
                     /gene="murG"
                     /locus_tag="VE783_13570"
     CDS             complement(<1..1057)
                     /gene="murG"
                     /locus_tag="VE783_13570"
                     /EC_number="2.4.1.227"
                     /inference="COORDINATES: protein motif:HMM:TIGR01133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050511 -
                     undecaprenyldiphospho-muramoylpentapeptide
                     beta-N-acetylglucosaminyltransferase activity [Evidence
                     IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyldiphospho-muramoylpentapeptide
                     beta-N-acetylglucosaminyltransferase"
                     /protein_id="HYX54481.1"
                     /translation="MRALIAGGGTGGHVIPALAIARELKTRYQAEVLFVGTARGIENR
                     LVPAAGFGLMKIKVGALKNVSLVTRLRTIFDLPAAVLHARKIIKVFAPDVVIGVGGYA
                     SGPAMAAAILGRIPTLAFEPNYVPGFANKAVGRWVSAAAVHFEQTQRFFRNAQVVGVP
                     VRPEFFSLAPRPAGTTPTLLVFGGSQGAHAINEAVTGAAPEVLRQLPGLRIIHQTGER
                     DYNGVLTGYERAGIKAEVSAFIDNMPQMFSDADLLVCRSGASTLAEIMAAGKPAIFIP
                     LPQAADDHQRRNAEAIAQAGAALLIPQSELTPEKLAARLIELLRDPARLREMSDKART
                     LSHHDAAGRVARMAAELA"
     gene            1704..2195
                     /locus_tag="VE783_13575"
     CDS             1704..2195
                     /locus_tag="VE783_13575"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HYX54482.1"
                     /translation="MTVAKNPIPEGFHTITASLVVRDAAKAIDFYKKALGAHELVRMP
                     SPDGKIMHAELKIGDSIIFLADEMPMPGSVKSPQSLGGCTSSLQIYVPDVDQTFKQAV
                     SAGCKETMPVADQFWGDRWGSFSDPFGHIWGVGTHKEDLTVEETGQRAQEFFSQMAKQ
                     KTA"
BASE COUNT          476 a          665 c          637 g          491 t
ORIGIN      
        1 ccgccagttc cgccgccatt ctcgccaccc ttcctgcggc atcgtgatgc gaaagtgtcc
       61 tcgccttgtc gctcatctcc cgcaacctcg ccggatcccg taacaactca atcaaccttg
      121 cggccagctt ctccggcgtc agctcgctct gcggaatcag cagcgccgcg ccggcctgtg
      181 caattgcctc cgcattcctg cgctggtgat cgtccgctgc ctgcgggagt gggataaaga
      241 tcgccggctt gcccgccgcc atgatctccg ccagggtgct ggcgcctgac cggcacacca
      301 gcaggtcggc atcagagaac atctgcggca tgttgtcgat aaaggcggaa acctcggcct
      361 tgattccagc gcgctcgtac ccggttagca cgccattata gtcgcgctct ccggtctggt
      421 ggatgatgcg cagtccggga agttgacgta gtacttccgg cgcagcgccg gtcactgcct
      481 cgttgatggc gtgcgccccc tgacttcctc caaacaccag aagcgttggc gtagtacctg
      541 ccggacgcgg cgccaggctg aagaactccg gtcgcaccgg gactccaacc acctgtgcat
      601 tgcggaagaa ccgctgcgtt tgctcgaaat gcaccgcagc ggctgacacc cagcgtccca
      661 ccgctttatt ggcgaatccg ggtacgtagt tgggctcgaa ggcgagggtt ggaattcggc
      721 caagtatcgc cgccgccatc gccgggccgg aagcatagcc gcctacccca atcaccacgt
      781 ccggcgcaaa tacctttatg atctttcgtg cgtgcagtac agcagccgga aggtcaaaga
      841 ttgttcgcag tcgcgtgacc aggctcacgt tcttaagggc gcccaccttg atcttcatca
      901 gcccgaaacc tgcggccggc actaaccggt tttcgattcc ccgggccgtg cccacaaaga
      961 ggacctctgc ctggtaacgc gtcttcagtt cgcgtgcaat ggcgagagcc gggataacgt
     1021 gtccgccggt gcctccaccg gcaatcagag cgcgcatggt caatgagcag tgtaaatgaa
     1081 gatgagctcc gaccatttga tctttactcg acagttgtca cccggagaat tagtatcagg
     1141 ccgcggccgc cacttctctg cagggttttc agatgcgggt atcggaacga gggatagaag
     1201 tccagattcc cggtcggaaa agaatatttt ccagggacat tcctgcgaag aatgtcagca
     1261 tcccgtggaa gggaattaag cgtgtatccc tattcaagaa ggattgctgg aatcacgatc
     1321 agattcggat gtgggtggag gccgagggag tagggttaac cgagctcacc gaggacatgc
     1381 ctggctggca ggacctggtg caggctgtcc cgaagtatct ttccggagca atggcagagt
     1441 atgaatggtg ggaccgagtg atttcgccca ctttcgaatt atgttggacg cagatttggc
     1501 ccggcacata actatcaatt cccgcctgtt atcggacaaa tgcactctca aagctttccc
     1561 tttctgatca gtggagatca ggctgatcag tgtcatcagt ggtaaggttt gtgcatttgt
     1621 cgtgaaatgc gcgcttgctc ttttttccac cgctcacagg cgtaaacttt ctgggtctaa
     1681 attgcctatg gaaggagaat tacgtgactg ttgccaaaaa tcctattcct gagggcttcc
     1741 acaccattac agccagcctg gtcgtgcgtg acgcggccaa agccatcgat ttctacaaga
     1801 aagcgcttgg cgcgcacgaa ctcgtgcgca tgccgagccc tgatggcaaa attatgcacg
     1861 ccgaactcaa gattggcgat tccatcatct tcttagccga cgagatgccc atgccgggca
     1921 gcgtcaaatc accgcaaagc ctgggcggct gcaccagcag cctgcagatc tatgttcccg
     1981 atgttgatca gacgtttaaa caggccgtat cggcaggttg caaagagacc atgccggtgg
     2041 ccgaccagtt ctggggcgac cgctggggca gcttcagcga tcctttcggt cacatttggg
     2101 gcgtaggcac gcacaaagag gacctcacag tcgaagaaac gggccagagg gcccaggaat
     2161 tcttcagtca gatggcgaag cagaagaccg cttagctgat ctacgttctc tcgattccaa
     2221 agggcgtgag cttcgttcag ctcgcgtcct tttcttttga ccgaacgtc
//
LOCUS       DASQYP010000420        24431 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_253725, whole genome shotgun sequence.
ACCESSION   DASQYP010000420 DASQYP010000000
VERSION     DASQYP010000420.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 24431)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 24431)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..24431
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_253725"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..897)
                     /locus_tag="VE783_13580"
     CDS             complement(<1..897)
                     /locus_tag="VE783_13580"
                     /inference="COORDINATES: protein motif:HMM:NF012722.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidine kinase dimerization/phospho-acceptor
                     domain-containing protein"
                     /protein_id="HYX54483.1"
                     /translation="MLARVGRDAELLSAALDRHGFPSAVLSTVDDFFREMTFGAAAAV
                     VTEESLNGSSENWGRRLQAQPAWSDFPIIVLTASGGASLIAKSPLYRNYGNITLLERP
                     LRSENLLSTVESAVRARLRQYEIRDYIHRQAESQETLRRTEKLAVAGRLAASIAHEIN
                     NPLAAITNLLYLISTAQDLEAAKKYNSIAQDELRRVADIANQTLRFYRAPQTAEQANV
                     AEVLDSALALFRSKLRTQGINISRDYAPGLTLSVSLGELRQVLVNLIANAIDAMPDGG
                     NILLRATPGNHPVSGRPGIRITV"
     gene            complement(944..2440)
                     /locus_tag="VE783_13585"
     CDS             complement(944..2440)
                     /locus_tag="VE783_13585"
                     /inference="COORDINATES: protein motif:HMM:NF018455.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATPase domain-containing protein"
                     /protein_id="HYX54484.1"
                     /translation="MPPTHQPETRLSTGIPGLDDILHGGLPEGHLYLVEGNPGSGKTT
                     FGLQFLLAGVAAGEPTLYVTLAESRAELEQAGSSHGFDLSKVEVFEVAPPELAGQASE
                     QYTVFHPSEVELADVMQSILERVAKVKASRIVIDSMSELRMLARDPLRYRRQIMTLKQ
                     FFMGLKTTVLLLDDRSGESSDTQLQSIAHGVLRMETLDRDFGAVRRQLEIRKMRATAF
                     REGFHDYIIREGGLVAFPRLISAEHRNQQVDRRQLSSGIDQLDRLMGGGFSRGSSCLF
                     IGPAGCGKSTLGARFLVSAAERGERGVMMAFDELPESILARCQGLGIPLESHIKKGMI
                     KIQQLDPAQVSPGEFVARIRSEVEQNDCRIVVIDSINGLFNAMQQEHSVVIQLHELLS
                     YLNQSGVLSIVILAQYGLLGSHMQTPLDVSYLADNVLLFRYFEARGVIRQAISVMKRR
                     SGPHERTIRELVIEESRVAVGGPLADFEGVLSGTPRFVGGSKDLSQDE"
     gene            complement(2755..3276)
                     /gene="nuoI"
                     /locus_tag="VE783_13590"
     CDS             complement(2755..3276)
                     /gene="nuoI"
                     /locus_tag="VE783_13590"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: protein motif:HMM:NF004537.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoI"
                     /protein_id="HYX54485.1"
                     /translation="MSILRDIAGIAKGMSVTFREMFAPTVVENYPDGAGPMKGAVFQE
                     RFRGLHVLQRDENGLEKCVACFLCSAACPSNCIYIEAAENTAENRISGAERYAKVYNI
                     DYNRCIFCGYCVEACPTDAITHGHGFELATFNASNLVYRKEQLLAPTPPVRVTEEAAI
                     MPASLPSAEQKHP"
     gene            complement(3416..4189)
                     /locus_tag="VE783_13595"
     CDS             complement(3416..4189)
                     /locus_tag="VE783_13595"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LytTR family DNA-binding domain-containing
                     protein"
                     /protein_id="HYX54486.1"
                     /translation="MSISAVIVDDEQLARDELSYLLKSVDDVNIVAQGRNGLEAVNLV
                     KEHNPDLLILDVQMPGLDGFGAIKKLLAGKIPMPQIVFATAFDQYAVKAFEVNAIDYL
                     LKPFDKKRVHQAIEKARKKLQTTAPAGNERIDLLVKMLESQKPQHSKVLLRSAGRLFL
                     VDQKDVCWASIEDGIISVAATNLEGQSNCRTLEELLEGLDPDMFWRAHRSYVVNINRI
                     KEVVPWFKSSYQLRMDDRKQTEVPVSRAQTKRLRELFGL"
     gene            4379..4909
                     /locus_tag="VE783_13600"
     CDS             4379..4909
                     /locus_tag="VE783_13600"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX54487.1"
                     /translation="MPATTSLKRAALAAAAAFFLFSATALRAIDKQESNATAAFARLK
                     TLVGTWEATSSKGTATSTFESIANGSTIIERVKVPGESEMVTTYYVDGGRLVLTHYCT
                     AGNQPHMQAEAYDPASNQLTFNFVGGGNLANPNAGHMHHAVLKFGGADDFSYDWTFQK
                     DGKSQFTENLQYHRVK"
     gene            4984..5397
                     /locus_tag="VE783_13605"
     CDS             4984..5397
                     /locus_tag="VE783_13605"
                     /inference="COORDINATES: protein motif:HMM:NF015735.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YciI family protein"
                     /protein_id="HYX54488.1"
                     /translation="MRYMLLIYTREDAMAQRSPEETQKTMEAHWELMDDTRRKGILEG
                     VEPLARTGMATTVRVQNGKPIVTDGPFAETREQLAGYYILNCKDLDETIAYARRIPTC
                     CGGAEGCIEIRPLPGLPQREPLPHQETELSVAHNG"
     gene            5390..6646
                     /locus_tag="VE783_13610"
     CDS             5390..6646
                     /locus_tag="VE783_13610"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor"
                     /protein_id="HYX54489.1"
                     /translation="MDEIRTTAEAIFRRESGRIIATLIRISGSFDLAEEAMQEAFASA
                     LTTWPERGVPDNPGAWITAVAHRKILDQARRERTRREKQEPLQYEIPTVQRAEAEAMF
                     EDQEYHMYPDDRLRLIFTCCHPALNPEAQIALTLRTLGGLQTPEIARAFLVPEPTLAQ
                     RLVRAKKKIAEAKIPYEVPSGREIAERLRTVQSVIYLIFNEGYAATSGDSLVRRELCA
                     EAIRLGWMLCQLLPNEPENFGLLALMLLHDSRRNARTDSQGRLITLDEQDRASWDQDQ
                     IRQGQDALERAMELRRPGSYQLQAAIAALHAEAPSPKETDWPQIAALYRELLLLEPSP
                     VLALNHAVAVAMSEGYASGLQRIEQLGASGELKNYHLFHAARADLLRRLGRKAEAEIA
                     YCRALELASNKVEQDFLRLRIQQMRD"
     gene            complement(6643..7632)
                     /locus_tag="VE783_13615"
     CDS             complement(6643..7632)
                     /locus_tag="VE783_13615"
                     /inference="COORDINATES: protein motif:HMM:NF012568.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008299 - isoprenoid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polyprenyl synthetase family protein"
                     /protein_id="HYX54490.1"
                     /translation="MSSPATSNAKEIFDLLRDDLEAIEREFGRDTVSSVRAITDIGEY
                     LRAGGGKRIRPALLLLAAKLFPHDQGSAVRLGAVVEIIHTATLVHDDIIDEAKTRRGR
                     PAANTQWGNSKCVLAGDWLYMQSFKIAVQERNFRILDVLIELTQQMVEGELLQMEKLG
                     KCISLEEHFDLIYRKTACLFSASMRMGALLGKATQDRESRLSEYGKHLGLAFQIVDDV
                     LDLTASEVVLGKPVASDLREGKVTMAVIHALERCTPAERKVVETVLEERAFKSVQHEQ
                     ILAILERYGSILYAYDEAAKHAEHARKAICTFPDSEVKRALLNIPEFVVERSS"
     gene            complement(7655..8155)
                     /locus_tag="VE783_13620"
     CDS             complement(7655..8155)
                     /locus_tag="VE783_13620"
                     /inference="COORDINATES: protein motif:HMM:NF003819.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YajQ family cyclic di-GMP-binding protein"
                     /protein_id="HYX54491.1"
                     /translation="MAQDNSFDIVSKVDLQEVSNAIQNALKEVHTRFDLKDSKSEIAM
                     EGKDAILMSSADEYKLKAVNDILQSKLVKRGVPLKALTYGVVEPAAGSRARQKITMQQ
                     GIPTEKAKDIVRVIKDSKKKVQASIQGDAVRVSGKDRDTLQEIIALLKGQDFGIDMQF
                     TNYRSN"
     gene            complement(8200..8358)
                     /locus_tag="VE783_13625"
     CDS             complement(8200..8358)
                     /locus_tag="VE783_13625"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX54492.1"
                     /translation="MSSKVIMAATLVCDKMTMVTIAARVSCGVRASARREVRTVRQQL
                     ASVGCVPG"
     gene            complement(8468..8995)
                     /locus_tag="VE783_13630"
     CDS             complement(8468..8995)
                     /locus_tag="VE783_13630"
                     /inference="COORDINATES: protein motif:HMM:NF017015.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DinB family protein"
                     /protein_id="HYX54493.1"
                     /translation="MSAKAEPLQAGRISQSLLPEFDHEMQTTRRTLERVPEDKLGWKP
                     HERSMTLGGLATHLATINHWTQAVFSMDSFDVAAAPPTQEIKSRDQLLKTFDENVAAA
                     RQALSGASDTDMLKPWSLVAGGKTMFTLPRVAVVRSFLLNHGIHHRGQLSVYLRLNNV
                     PVPSIYGPSADEGNM"
     gene            complement(9398..10672)
                     /locus_tag="VE783_13635"
     CDS             complement(9398..10672)
                     /locus_tag="VE783_13635"
                     /EC_number="2.7.7.65"
                     /inference="COORDINATES: protein motif:HMM:TIGR00254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GGDEF domain-containing protein"
                     /protein_id="HYX54494.1"
                     /translation="MPLNKKLFKVLYRLTLPGGLLLALTAFLVKVGILADPQSAPVRL
                     YPLAIFAVGLGLSAFFLRSRLFFAALVLTISGAMLCWVAPFSSPHAAAVMRDAIAVLL
                     PVNLVVLAFVKERGIISRVGRRRLAILAGQIIVVAFLCLPFMTNVTGYMQRPFIPVQM
                     TSWSRMIQPALIAFLSAACILIVLLIKRYRAVESSLLWALIPSFIAMRLAQEGVAGVY
                     LAAGGLAVIVAVIENSYSMAYLDELTQLPSRRALNEALMKLPDTYTVAMFDVDHFKKF
                     NDTFGHESGDQALQMVASRLARIAGGGKAYRYGGEEFTIVFPGKAMDEVFVYLERMRK
                     LIEQSVFTVRGKDRRGGRGIRRGAKRQTRVTVSVGVASTSGDQFTPAEVMRIADQALY
                     KAKGRGRNCVVTARNSKAPRQVESGLQILSVS"
     gene            complement(10838..11254)
                     /locus_tag="VE783_13640"
     CDS             complement(10838..11254)
                     /locus_tag="VE783_13640"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX54495.1"
                     /translation="MKNVEYISRSVRNALVVHPDLAVLSATQAVLTQHGMTVIIARDL
                     PTALLAISQHRFELCILSVGISEKADGWALASVLHMCFPNAYIAMIAPDPDLFILQTA
                     INTGVTQLYLATRSAVEIAADIAKDFAGKSPGERLQ"
     gene            complement(11254..11655)
                     /locus_tag="VE783_13645"
     CDS             complement(11254..11655)
                     /locus_tag="VE783_13645"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HYX54496.1"
                     /translation="MAKKPDMLIVDDEPNVCLTLKLIFEQEGFIVKTAASAKDGIHLL
                     QNGRHFDLVLTDLHMEREDVGLDLARAAKRLHPAPVLVILTGYASMKNARIALDIHVD
                     HFALKPIELPELLEAVRRLVGWRSDAHGLGD"
     gene            11860..12570
                     /gene="aqpZ"
                     /locus_tag="VE783_13650"
     CDS             11860..12570
                     /gene="aqpZ"
                     /locus_tag="VE783_13650"
                     /inference="COORDINATES: protein motif:HMM:NF003838.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015250 - water channel activity [Evidence
                     IEA];
                     GO_process: GO:0006833 - water transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aquaporin Z"
                     /protein_id="HYX54497.1"
                     /translation="MKYAVELFGTFVLVFAGVGTAVLAGAQVGNVGVAMAFGLSLLAM
                     AYALGPVSGCHINPAVTLGVLLSRRMSAKEAMGYWVSQVIGAILGAGVVLFIAKGAAG
                     GYDPVLTGFATNGYAAHSPGHYSLAACFAAEMLLTMLLVITVLCATDERAPSGFAGIP
                     IGLILTAMILTGIPVTNGGFNPARSIGPAVFVGGWALQQIWLFIVAPMLGAVLASRIY
                     LGTKSSPEKKLQAQAAAK"
     gene            12735..13076
                     /locus_tag="VE783_13655"
     CDS             12735..13076
                     /locus_tag="VE783_13655"
                     /inference="COORDINATES: protein motif:HMM:TIGR03433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PadR family transcriptional regulator"
                     /protein_id="HYX54498.1"
                     /translation="MTDQRDLFPGALELMILQTLRRKALHGYALAQHIKQTSDDLLQV
                     EEGSLYPALQRMLKAGLVKAEWGISATNRRVRTYQLTPAGRKHVERELSSFERMLEGI
                     TRVLTPSKQKG"
     gene            13099..15729
                     /locus_tag="VE783_13660"
     CDS             13099..15729
                     /locus_tag="VE783_13660"
                     /inference="COORDINATES: protein motif:HMM:TIGR03434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ADOP family duplicated permease"
                     /protein_id="HYX54499.1"
                     /translation="MLPRHKHYDDLSEEIRGHIGERVEDLVAEGLSREDAETAARREF
                     GNTTLLQERGREVWQWNMSENLLRDMKLAIRQLRRNPGFTFTVLVTLALAVGANTAVF
                     SLVNVLLVRPLPYTEPQRLAAVVRNLKGVNPSGQVVDDTEDGQDGETWELIRDHVSAA
                     QFAAEYHGADGVNLEAGNQARYVLDHRVSASYFDVLGIKPLLGRGFTQEEDSPHGPNA
                     VILSHETWKSLFGSDREIIGRAIRLKGEPYTIVGVMPPNLQTTAVADLWTPLRPWRGG
                     EGGGDNYRVLVRLRDGATWAELNAQLAPIHPEMFDNFFKGASLRLLSRPLQQDLADEK
                     RAPTLMLMAAVGLILLIACINIAGLMLVRLYRRDNEMATRLALGATRLSILRQIFMEP
                     LLLTLAGSAAGVALAYLSLRSFVSLFPEDMLPVGSINIDGRVLLFSSVVGVISGLMIG
                     IFPAIASNRFETRPSLCGKASASSPQSTRTRYILIACEVCLTVVLLAGAGMLVRTLVY
                     LRTLPPGFDSQNVTVAKASLDDARFRDPAAFQKLLQASLNSMRRIPGVDSAAVGLGLP
                     YERGLNDGFKIADGPTAGTSMVSSASYVTPDYFRALRIPVLAGRAFTQEDTADTPHVA
                     IVNAAFARKFFRSVDVIGRHLQFGKDLCTVVGVVGDVTKQPGISITAPLATEPVYYVP
                     ATQVSGPFLALIHTWFQPSWIVRTQGPISGLSEQMQSALQEAAPNLPFSAFHQMSDLQ
                     AKALGQQRVEVVLLIGLAALALLLAVVGIYGLVSNLIAQRRREIGIRMALGCTVVQAM
                     IASGRTGLTATCIGMAAGAGAAAIALRAMNTQLFGVRSLDPATLGAVCVLLLVAACFA
                     SFAPTLRIARINPSATLRSE"
     gene            complement(15790..17328)
                     /locus_tag="VE783_13665"
     CDS             complement(15790..17328)
                     /locus_tag="VE783_13665"
                     /inference="COORDINATES: protein motif:HMM:NF012356.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-amylase family glycosyl hydrolase"
                     /protein_id="HYX54500.1"
                     /translation="MPVLTPEIQIEAPRPAAPERINERSLYPMLYQINTRVWLTELSL
                     KLNRPATLDDIPDAEFDRLAEMGFEWIWFLSVWQTGLAAQRVSRSNPEWRKEFEETLP
                     DLRDEDIAGSGFAITGYTVHERLGGDAALARLRERLRSRGLRLLLDFVPNHMALDHPW
                     VAEHPEYFVMGTEADLARAPQNYVRLEAAGNRIFAYGRDPYFPGWPDTLQLNYGNLDT
                     QKAMMRELLKIAGQCDAVRCDMAMLILPEVFQRTWGIPSEPFWPRATTEVRKLSPDFV
                     FMAEVYWDLEWTLQQQGFNYTYDKRLYDRLHHGAARPVREHLLAGLDYQNKMSRFLEN
                     HDEPRATATFPLDQHKAAAVITFFAPGLRFFHQGQLEGATKRISPHLVRGPVEPINED
                     LKTFYDRVLRALRLPVIRNGEWQLLECNSAWQGNWSNDAFIAFAWQAPEGKRLLVTVN
                     YAAHQSQCYVRLPFGGLGGCQWRVRDLLSDSIYDRNGADLQSRGMYLDVSAWHCHVFE
                     ITKL"
     gene            17570..20362
                     /locus_tag="VE783_13670"
     CDS             17570..20362
                     /locus_tag="VE783_13670"
                     /inference="COORDINATES: protein motif:HMM:NF015177.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX54501.1"
                     /translation="MTASQRTPSAYIETIEQKRLNDARELGIPWKKWGPYLSERQWGT
                     VREDYSESGDAWNFFTHDQARSRAYRWGEDGIGGISDDKQHLCLAVALWNERDPILKE
                     RYFGLTNGEGNHGEDVKEYYFYLDSTPTHSYMKYLYKYPQAAFPYADLVETNRRRTRN
                     DFEYELIDTGVFNDDRYFDVFIEYAKDGPEDLLVRITTVNRGPDTAELHLLPTLWFRN
                     DWSAWIAASNRAAQKPVLKQMKTDAGTSAVAVEHQILGEYIFSCEGDVPLLFTENETN
                     HERLFHQPNESPHVKDGINDCVVQGKQDAVDPEKQGTKVAAHYKISVDAGETKVIRLR
                     LSKISPDQKSKAFGKQFDEIFGDRLREADEFYKSVTPPRSGEEEARVMRQALAGMLWS
                     KQFFFFDGDNWLDEHHSNPLHSGFRAARNSEWFHMLNEDIISMPDKWEYPWYAAWDLA
                     FHTLPLSIVDPDFAKQQMELMLRAAYLHPNGQMPAYEWNFSDVNPPVHAFATLFLNRT
                     EQALRQQTDVDFLKAIFNKLLLNFTWWVNRKDRFGKNVFEGGFLGLDNIGVFDRSAPL
                     PTGGNLEQADGTAWMALFSQNMLELAFEIAQHDPSYEPMIMKFLEHFYYIGAGMNRRD
                     QYGMWDDEDGFYYDLLRLPDGSSQRLKIRSMVGLLPLCATSVVEKQIRDRFPQTMALV
                     QERLRRIPELRDTIHPTGPGHFGVADRGILALVNPERLRRILTKMLDENEFLSPYGIR
                     SLSKFHQEHPFVLQVNGQEYRVDYLPSESNTGMFGGNSNWRGPIWMPVNTLIIRALLQ
                     YYLYYGDNFKIECPTGSGKLMNLFEVSKEISDRLTRIFTRDEHGKRPVYGGTEKFQSD
                     PHWRDHILFYEYFHGDNGAGLGASHQTGWTGVVAKLIQLFGILDSKRGLQVGTQAAFA
                     KPAAAPEDEKETVAVA"
     gene            20499..21461
                     /locus_tag="VE783_13675"
     CDS             20499..21461
                     /locus_tag="VE783_13675"
                     /inference="COORDINATES: protein motif:HMM:NF024946.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transporter"
                     /protein_id="HYX54502.1"
                     /translation="MAKFRHLTLHLAASVASVILFFSPLVSAQTLAPRAYVVTPVDTN
                     AFTVTTNLYRGDILFDNSVPIEDASGTISLSVPTFYHSLTFFRRSASVTVGLPYALAS
                     LRARVVDQQVDTYRSGLGDGAVRFSVNLMGGPAMKLPEFMKWKQKRLLGVSIVVQAPT
                     GQYDPRLLINVGNSRWVIHPELGYSERHGNWLVDIYSGVIFFTKTPEFFSHNNFVPGK
                     QERTQEPVEVVEGHLSYDFKPRLWVSLDGNFWYGGRTTLNGVENRASLQKNSRVGATA
                     AIPITLHQSIKFSYDRGAVIRFGGKYQAVAVAWQYGWIGSLWPK"
     gene            complement(21762..22940)
                     /locus_tag="VE783_13680"
     CDS             complement(21762..22940)
                     /locus_tag="VE783_13680"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX54503.1"
                     /translation="MSPRIEVVPQSQGAIIFTSARALNNTDAANAATNIWAMNSDGTN
                     AHGLTQLTATGASSADPVWSPDGKKIAYTSMRALDGSNAPIGAVNIWVMNADGSGSVP
                     LTRLTTTLVSSIHANWSPDSSKIAYDSTRALEGYNMIGATTNIWVVNADGTSPAALTT
                     LRFAPSVFPVWSPDGTKILFTSSRSIAGLDIEMGINNIWVMNADGSNPQPLTKSRITP
                     SSQVAWSPDAKKIAFVSTRALNLSDVDIGAANLWVMNSDGSSPTPLTHLSGPYNMIPD
                     SPVWSPDGSKLVYVSSRALDGSSAGGTVLNVWVINSDGSADHPVTALTAAKSYEPSWS
                     SDGSKIIYCSTRALDGTNSLNTNVTWNIWMNPSTGGPGTALTRSTAAAADSAGPQWDH
                     "
     gene            complement(23078..24040)
                     /locus_tag="VE783_13685"
     CDS             complement(23078..24040)
                     /locus_tag="VE783_13685"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX54504.1"
                     /translation="MTKRLIVVLPFLLLFSLAAVAQSGEASPAAPGNAAVVMSLHGLS
                     EGSYSLLPADPRFVMATDEKGESSSRTHSHYGSSSGSRIGESPSSAGPLPCEKPAKLF
                     SAREYSGPLERFTARFTRRPEMTTVPTHVRDGNDICGLDIGQKFRLFYKTTLDPVTFI
                     GAAASAGFSQWNNDDKEWGQGAEGYGKRYGAAYVDRAQRNFFGQFFYPAIFQQDPRFY
                     RLGTGTVKERLEHAVAHTFVARRDDGARMPNLSHWAATVSVQSLANLYHPDNDRGFGS
                     TATRVGVSFGVNMGWDVAKEFWPEIVRGLHLPFKERTVVSSGTP"
BASE COUNT         5336 a         6906 c         7163 g         5026 t
ORIGIN      
        1 cacggtgatt cttattcccg gccggccact caccggatgg tttcccggcg ttgctcgcaa
       61 aagaatattg ccaccgtccg gcatcgcgtc aatagcattt gcaatcaagt tgaccagaac
      121 ctggcggagt tcgcccaagg agacgctgag cgtgagcccg ggggcgtagt cacgcgagat
      181 atttatccct tgagtgcgca gctttgacct gaacagagcc agcgccgagt caagcacttc
      241 cgccacgttc gcctgctcag ctgtctgtgg agcgcgataa aaccgcagtg tctgattggc
      301 gatgtcagca acgcgacgca gctcgtcctg ggcaatgctg ttgtactttt ttgcagcctc
      361 aaggtcttga gcggtggaga tcagataaag aaggttggtg atggcagcca gggggttgtt
      421 gatttcgtga gcgatgctgg ccgccaggcg tccggcaacc gcaagcttct cggtgcgccg
      481 caaagtctcc tgagattcag cctggcggtg gatgtaatcg cggatttcat actggcgcag
      541 gcgggcacgc acggcggact ccacggtgct cagcagattt tccgagcgca gcggccgctc
      601 cagcagagtt atattgccgt aattgcggta taacggcgac ttcgcaatca acgatgcgcc
      661 gccagatgcc gtgaggacga tgatagggaa atccgaccac gcgggctgag cctgaagcct
      721 gcgtccccag ttctcgctgg agccgttgag ggattcttca gtcacaacgg cagcggccgc
      781 tccgaaggtc atttcgcgaa agaaatcgtc aacggtggag agcactgcgc taggaaaacc
      841 gtggcggtcg agcgccgcgg acaaaagctc cgcgtcgcgc cctacacggg ccagcaccaa
      901 gatacgtagc tcaggattca attcactcac ggcagcagaa ccactactca tcctgcgaca
      961 agtcttttga gccgccgaca aaacgaggcg taccactgag aacgccttca aaatcagcca
     1021 gcggtccgcc caccgcgact ctgctctcct caatcaccag ttcacgaatg gtgcgctcgt
     1081 gcggcccgct gcgtcgcttc atcacggaaa tggcctgccg gatgactccc cgagcttcga
     1141 aatagcggaa cagcaaaaca ttgtccgcga gataggagac atccaggggg gtctgcatat
     1201 gcgagcctaa caggccgtac tgtgccagga ttacgatgct aagcacgccg ctctggttca
     1261 gataggagag taactcgtgc aattgaatga cgacggaatg ctcctgttgc atcgcattaa
     1321 agagtccgtt gatgctgtca attacaacga tccggcaatc attctgctcc acctcactgc
     1381 ggatccgggc aacaaactca ccaggagaca cctgcgccgg gtcgagttgc tggatcttga
     1441 tcatgccttt tttgatatga ctctccagcg ggatgccaag gccctggcag cgggccagga
     1501 tcgattccgg aagctcatca aatgccatca tgacgccgcg ctcgccgcgc tccgccgctg
     1561 ataccagaaa cctggcgccc aaggtggatt tgccgcatcc tgccgggccg ataaacagac
     1621 agcttgagcc acgtgagaac ccgcccccca tcagccggtc tagttgatcg atcccgctcg
     1681 aaagctggcg ccggtccacc tgctggttcc ggtgctcggc ggagatcagc cgcgggaagg
     1741 ccaccagccc gccttcgcgg atgatgtaat cgtgaaagcc ttcacgaaat gcagtggccc
     1801 gcatcttgcg gatttccagc tggcggcgca cggcgccgaa gtcgcgatcc agggtctcca
     1861 tgcgaagcac gccgtgggca atgctctgga gctgcgtgtc agagctctca ccggaacggt
     1921 catccagcag gagcaccgtt gtcttaagtc ccatgaagaa ctgtttcagg gtcatgatct
     1981 ggcggcggta acgaagcgga tcgcgcgcca gcatacgcag ttcagacatg gagtcaatca
     2041 caatgcggct ggccttgacc ttcgctacgc gttcaagaat ggattgcatc acatccgcca
     2101 gctccacttc cgaggggtga aaaaccgtgt actgctcaga tgcctgtccc gccagttcag
     2161 gcggcgcaac ttcaaagact tcgactttcg agaggtcgaa gccgtgcgaa gagccggcct
     2221 gctccagttc cgcacgcgat tccgccagcg tcacgtaaag cgtgggctcg ccggcggcaa
     2281 cgccagccag caggaattga agcccaaagg tcgtcttgcc cgatccggga ttgccttcca
     2341 ccaaataaag atgcccttcg gggagaccgc cgtgaagaat gtcatccaga ccaggtattc
     2401 cggtactcag gcgagtttcg ggctgatgcg taggcggcaa ggctcctcca acgatccata
     2461 gatgcagatt gaggatggga cggctagtcg gaattcaaaa ataaaagagg cgagacgaca
     2521 aaccgttcgg tctaccgggt ttgttcatct cggcgaccct ctatcagcgg cagcgtctga
     2581 gaaggggcga aaccctcgtc agttagcagc gcgacgtcca tgccggccac aggcagtttc
     2641 gccagaccaa cgcacgtgcc aagtctgagc acctgttgct ttctgaccgc tctcagggag
     2701 ttaagccttt ttaaatgccg tggagatttg ttcaggcgga cagtcagacg ccgcttacgg
     2761 gtgcttctgc tccgcgctgg gcagcgacgc cggcataatc gccgcctctt cggtcacgcg
     2821 gactggcggc gtcggggcaa gcaactgctc tttgcggtac accagattgc tggcgttgaa
     2881 ggtagcgagt tcaaaaccgt ggccatgcgt aatagcgtcc gttgggcagg cctcaacaca
     2941 atagccgcag aaaatgcagc ggttgtagtc gatgttgtag accttggcgt aacgctcggc
     3001 gccgctgatg cggttctctg ccgtattctc ggcggcctca atgtaaatgc agttcgaagg
     3061 gcaggcggcg gaacaaagga aacaggcaac acacttttcc aggccgttct cgtcgcgctg
     3121 aagaacatgc agtccgcgga agcgctcttg gaacaccgca cccttcatgg ggccagcgcc
     3181 atcaggatag ttctccacca ccgtgggagc gaacatctcc cggaaagtca cagacattcc
     3241 tttagctata ccggctatat cacgaaggat cgacataaaa tcagtataaa ggttgacggc
     3301 gaggcagaac aacgctgtgg atgcgtgtta acaggcagca aggaaaaaag tatgtgcctt
     3361 atcggcttgg catcttaaag gggttccccg cgcgtgcgct cggcatgtaa aacaactaca
     3421 gcccaaacaa ctcgcgcagt cgcttggtct gggcacggct gacgggaact tcggtctgct
     3481 tgcgatcgtc catccggagc tgatacgagc tcttgaacca cggtaccact tccttgatgc
     3541 ggttgatgtt caccacataa gaacgatgcg cgcgccagaa catatcggga tcaagtcctt
     3601 ccaacagttc ttcaagcgtg cggcaatttg actggccttc caggttagtc gcggccacgc
     3661 tgatgattcc gtcttcaatg gaggcccagc aaacatcctt ctgatccacg agaaagagcc
     3721 gcccggcaga gcgcagcaga accttggaat gctgcggctt ctgcgactcc agcattttca
     3781 ccaacagatc gattcgttca tttccggcgg gagcggtggt ttgcaacttc ttgcgggctt
     3841 tttcgatggc ctgatgtacg cgcttcttgt cgaacggctt tagcaggtaa tcgatggcgt
     3901 tcacttcgaa ggccttcacg gcatattggt caaacgcggt ggcgaagacg atctgcggca
     3961 tcgggatctt accggcgagc agctttttga tggcgccgaa accatcgagt cccggcatct
     4021 gaacgtcgag gatcagcaaa tccgggttgt gctcttttac cagattcacc gcttccaggc
     4081 cgttacgtcc ctgggcaacg atgtttacgt cgtcgacgga cttcaggaga tagctcagct
     4141 catcgcgggc gagctgctca tcatcgacaa tcaccgcaga tatggacact cagccctcct
     4201 aaagaaccag tatagtttgg cggcccttgc gtcctcaaca caaattgcac cagaaaaggt
     4261 gcaatcggaa cggcagcaaa ttccctctta ggttgtcgat ttcttccgcg ccgcgcgtcg
     4321 ttacggcgag caggacgaaa acaaaccgcc tgctgccaag attgatagga gaatctcaat
     4381 gccagcgact acatcactaa agcgggcggc acttgcggcc gccgcagcgt tctttttgtt
     4441 cagcgcgacc gccctgcgcg cgatcgacaa gcaggaaagc aacgccactg cggcgttcgc
     4501 ccgacttaag accctggtag gcacgtggga agcgaccagc agcaagggga cggcgacttc
     4561 gacgttcgag tccatcgcga acggcagcac gattatcgaa cgcgtcaaag tcccgggcga
     4621 atccgagatg gttaccacct actatgtgga cggtggtcgc ctggtgttga ctcactactg
     4681 cacggccggc aaccagccgc acatgcaggc ggaagcttat gatccggcgt caaaccagct
     4741 cacgttcaac tttgtgggcg ggggcaactt ggccaatccg aatgccggac acatgcatca
     4801 tgcggtgctg aaatttggcg gcgcagacga tttctcctac gactggacgt ttcagaagga
     4861 cggcaaatct cagttcacag agaacctgca atatcaccgc gtaaaatagc ggaaacatat
     4921 tgggggagcg caacagcgct tcccttgttt ggacccagcg gtcataactg gagaggagct
     4981 tatatgcgtt acatgctttt gatttacacc cgcgaagatg ccatggccca gcgttccccg
     5041 gaagagacac agaagaccat ggaagcgcac tgggagctga tggacgacac gcgacgcaaa
     5101 ggaattctgg aaggtgtaga gccgctcgcc cgcaccggca tggcaacaac ggtgcgcgtc
     5161 caaaatggca agcccattgt tactgacgga ccatttgcgg agacccgcga acaactggcg
     5221 ggctattaca tcctgaactg caaagatctg gatgaaacca tcgcctatgc ccggcgtatc
     5281 ccgacttgct gtggtggcgc cgagggctgc atcgagatca ggccactgcc gggattacca
     5341 cagcgcgaac cgttgccgca ccaggagact gagctttctg ttgctcacaa tggatgagat
     5401 cagaactaca gcggaggcga tcttccggcg cgagtccggc cggatcatcg ccacgctgat
     5461 ccgcatttca ggatcattcg atctggcgga agaagccatg caggaagcgt tcgcctcggc
     5521 cctgaccact tggcctgaaa gaggggtgcc agacaatccc ggagcatgga tcaccgccgt
     5581 ggcgcatcgc aagatcttgg atcaggcacg ccgcgagcgc acccgccgcg aaaaacagga
     5641 gccgctgcaa tacgaaatcc ccaccgttca gcgcgccgag gccgaagcca tgttcgagga
     5701 tcaggaatac catatgtatc ccgacgaccg gctccggctt atcttcacct gctgccatcc
     5761 ggcgctgaat ccggaagcac agattgccct cacactgagg acattaggcg ggctgcagac
     5821 gccggagatc gcgcgggcat ttctcgtccc cgagccgaca ttggcgcagc ggttggtacg
     5881 ggcaaagaag aaaattgcgg aagcaaagat tccatacgaa gtgccgtcgg ggcgagaaat
     5941 cgcggagcga ttgcggaccg tccaatcggt catctatctg atcttcaacg aaggttatgc
     6001 ggcgacgagc ggtgattcac tggtacggcg cgagctgtgc gcggaggcca tccgcctggg
     6061 ctggatgctc tgccagcttc tgccgaacga gccggagaat tttggcctgc tcgccctgat
     6121 gctgctgcac gattcccggc gcaatgcgcg aactgattcg caggggcgac tgatcactct
     6181 cgacgagcaa gaccgcgcgt cgtgggatca ggaccagata cgccagggtc aggatgcgct
     6241 ggagcgcgcc atggagctgc ggcgcccggg cagctatcag ttgcaggctg ctatcgcggc
     6301 acttcatgca gaggcgccct cgcccaaaga gactgactgg ccgcagattg cggcgttata
     6361 ccgggagctt ctgcttctgg agccttctcc ggtgctggca ttaaaccacg ctgtagcggt
     6421 ggcaatgagc gaaggttatg caagtgggct gcagcgtatt gaacagcttg gtgcttccgg
     6481 cgaactgaag aattaccact tgttccacgc cgcgcgggcc gacctgctgc ggcggcttgg
     6541 acgtaaagcc gaagctgaaa tcgcctattg tcgcgcgctg gagctggcaa gtaataaggt
     6601 cgaacaggac tttctaaggt tacgcatcca gcagatgaga gattagctgc ttcgttccac
     6661 cacgaactca ggaatattca gcaacgcgcg cttcacctcc gaatcaggga aagtgcagat
     6721 ggcttttcgc gcatgctcgg cgtgcttggc ggcttcatcg taggcgtaga gaattgagcc
     6781 gtagcgttcc aggatggcca gaatctgttc atgctgtacg cttttaaagg cacgctcttc
     6841 caggacggtc tccaccacct tgcgctccgc cggggtgcag cgttcgagag catggataac
     6901 agccatggtg accttacctt cacggagatc gctggccaca ggcttaccca gcactacttc
     6961 tgacgctgtg agatcaagga cgtcgtctac gatctgaaaa gccaacccca aatgcttccc
     7021 atactcggaa agacggcttt cccggtcttg ggttgccttg cccagcaacg cgcccatgcg
     7081 catggaagcc gagaaaaggc acgccgtctt gcgatagatc aggtcaaagt gttcctcgag
     7141 agagatgcac ttgccgagct tctccatttg cagcagttcg ccttccacca tctgctgcgt
     7201 gagttcgatc agcacgtcga ggatgcggaa gttgcgttct tgcacggcga tcttgaacga
     7261 ctgcatgtag agccagtcac cggcaagcac gcatttggaa ttgccccact gggtgttcgc
     7321 ggctggacgg ccgcggcgcg tcttggcttc atcgatgatg tcgtcatgga ccagcgttgc
     7381 ggtgtgaatg atttcgacaa cagcgccgag acgcaccgcg cttccctgat cgtgagggaa
     7441 gagctttgcg gccagcagca ggagcgccgg gcgaatccgc ttgcctcctc cggcacgcag
     7501 gtattcgcca atatccgtaa tggcgcgcac gctggagacg gtatcgcgcc cgaactcgcg
     7561 ctcgatcgct tccaaatcgt cgcgcagcag gtcaaaaatt tccttggcgt tgctggtggc
     7621 cggtgaactc aaacaactcc ccttctgctc tgggctaatt gctgcggtag ttcgtgaact
     7681 gcatgtcaat cccgaagtcc tgccctttaa gcagggcgat gatctcctgt aatgtgtcgc
     7741 ggtctttccc ggatacgcgc acggcatcgc cctgaatgga agcctgaact tttttcttgg
     7801 aatccttgat cacccgcacg atgtcctttg ctttttctgt cgggattccc tgctgcatgg
     7861 tgattttctg gcgcgcacgc gatccggcgg ccggctccac cacgccatat gtgagtgcct
     7921 tgagcggcac accccgcttg accagcttgc tctgcagtat gtcattgact gccttgagct
     7981 tatattcatc ggccgaactc atgaggatgg cgtctttgcc ctccatcgcg atctctgatt
     8041 tcgaatcctt gagatcaaag cgcgtatgga cctccttcag ggcattctgg attgcattcg
     8101 agacttcctg aaggtcgact ttgctgacga tgtcgaaaga gttgtcttga gccatgctgg
     8161 tattagctta ctaaaagagc agccgggcag tgggagtttt taaccaggaa cacaccccac
     8221 agacgcaagc tgctgccgca cggttcgaac ctcgcgtcga gcagaagcgc gaacaccgca
     8281 ggaaacacgt gccgcgatgg ttaccatcgt catcttgtcg caaaccagcg tggctgccat
     8341 gatgaccttg cttgacatca ctcctgaccg gaggttttgg gggaaaagca gccggtcaga
     8401 aagtttctaa cctaaacagg cctcggatga gcatccgagg cctgaatttt tgcgctctga
     8461 ttgctcctta catattccct tcatcagccg aaggcccata aatggaaggc acaggcacgt
     8521 tgttaaggcg cagatagacc gagagctgtc cgcgatgatg gatcccgtga ttcagcaaaa
     8581 agctgcgcac aacggccacc ctgggcaatg taaacatggt cttgcccccg gcgacgaggc
     8641 tccagggctt cagcatgtca gtatcgcttg cgccggaaag agcctggcgt gccgcggcaa
     8701 cattctcgtc gaacgtcttg agcagttgat cacgcgattt gatttcctgc gtcggtggcg
     8761 cggcggcaac gtcaaaggaa tccatgctga acacagcctg tgtccagtga ttgatcgtcg
     8821 ccagatgcgt ggcgagaccg cctagcgtca tggatctctc gtgaggcttc cagcccagct
     8881 tgtcttcggg gacccgctcc agagtccgtc gagtggtctg catttcgtgg tcgaattccg
     8941 ggagcagcga ttggcttata cggccggcct gcaatggttc tgctttggct gacatggaaa
     9001 gattcctcct ggcagataac gttggcggga atcattctac attcggagct ggtgatcgtg
     9061 aaaagagcgg ccaatcggcg gcgatttggg tgttggaggg aaaggggagc ggccgagcac
     9121 cgcgccttcc attgcccacg aggagtcgga cgcggcaagc cgcggcaccg cggcgtctgt
     9181 accgcgatct tgccgcgacg caaaagccat agccgcagca agcgggcgat ctgttgaggc
     9241 gagtgcccgc cgccttgaaa atgagcgcga aaccagaatc gacgaggatt ctgaaagacg
     9301 aagcacgaga taccaagtac cgggtttaga acttccgggc tacccagaga attagagcta
     9361 gaaacataag aatctcccct gtgtttgtga aaacaaacta acttactgac aagatctgca
     9421 agccgctctc cacctggcgc ggagccttgc tgttgcgggc ggtgaccacg cagttgcggc
     9481 cgcgcccctt cgccttgtag agggcctggt cagcgatgcg catgacctca gcaggagtaa
     9541 actggtcgcc gctggtggaa gccacgccca cgctcaccgt cacgcgagtc tggcgctttg
     9601 cgccgcggcg gattccccgg ccaccacggc ggtctttacc gcgtacggtg aaaacagatt
     9661 gctcgatcag cttgcgcatc cgctccaggt agacaaaaac ttcatccatg gccttgccgg
     9721 ggaagacgat ggtgaactct tccccgccgt aacgatatgc cttcccgcct ccggcgatgc
     9781 gtgccaggcg cgaggccacc atctgcaaag cctgatcgcc ggattcgtgg ccgaaggtgt
     9841 cattgaattt cttgaaatgg tctacatcga acatcgccac ggtgtaggtg tccggcagct
     9901 tcatcaatgc ttcattcagc gctcggcggc tcgggagctg ggtgagttca tcgaggtacg
     9961 ccatgctgta agagttctca ataaccgcaa cgatgaccgc gagtccgccg gcagcgagat
    10021 acaccccggc cacaccttcc tgcgcaagcc tcatggctat gaatgaaggg ataagagccc
    10081 acagcaaact actttcaacc gccctgtagc gcttgatcag gagaacgatc aaaatgcacg
    10141 ccgcagaaag aaatgcgatc agagccggct ggatcattcg actccaggat gtcatctgca
    10201 cggggataaa cggccgctgc atgtagccgg tcacattcgt catgaagggc aggcacagga
    10261 acgccaccac aatgatctgg cctgcaagaa ttgccagccg tctgcggccc acgcgcgaga
    10321 tgatgccgcg ctcctttaca aatgccagga caacaagatt caccgggagc aagaccgcta
    10381 tggcatcccg catgacagca gcagcgtgcg gcgatgaaaa tggcgcaacc cagcagagca
    10441 tggctccaga aatcgtcaac accaacgccg cgaagaagag ccggctgcgg agaaagaacg
    10501 cactgagtcc aaggccaacg gcaaagatag ccagcggata gaggcgtacc ggcgctgatt
    10561 gcggatcagc caggatccca accttcacca ggaaagcggt aagggccagc aatagaccac
    10621 ccggcagcgt aagccggtac agaaccttga agagcttttt gttcaacggc acgggcgctc
    10681 cgaagtggca attaaggtaa gtcattgcca gccaatgaga taaagccaat aggattgggc
    10741 tggaacgaac ctatttatat gaaaggagtg ttgtagcggg tagataccga tggtcgcatg
    10801 gccggatgcc tgagggcggt aggcccaacg tgtaccgcta ttgcagcctt tcgccagggg
    10861 acttgcctgc gaagtcttta gcaatatcgg cagcgatttc tacggctgag cgggtggcaa
    10921 gataaagctg agtgacgccg gtgttgattg ccgtttgcag gatgaaaagg tcgggatcgg
    10981 gggcgatcat tgcgatatac gcattgggga aacacatatg aaggactgag gccagcgccc
    11041 agccgtccgc tttctctgag atccccacgc tcaggatgca aagctcaaag cgatgctgcg
    11101 aaatcgcaag gagcgcggtc ggcagatcgc gcgcgatgat cacagtcatt ccatgctggg
    11161 taagaacagc ctgagtggcg gaaagaacgg cgagatcagg atgcacgaca agggcgttgc
    11221 gcaccgaccg cgagatgtac tcgacgttct tcatcaatct cccagcccgt gcgcatcgga
    11281 ccgccagccg accagccggc gaacggcctc caggagttct ggcaattcaa tcggtttcag
    11341 cgcgaaatga tcgacatgaa tatccagggc gatgcgggca tttttcatgc tggcgtaacc
    11401 cgtaaggatg acaagcacgg gtgcgggatg gagccgcttg gcggccctgg ccagatcaag
    11461 cccaacgtct tccctctcca tgtgcagatc cgtcaggact agatcgaagt ggcggccgtt
    11521 ctggagcagg tggatgccgt cttttgcgct ggccgccgtt ttcacgatga agccttcctg
    11581 ctcaaagatg agcttcaggg tcaggcaaac atttggctca tcgtccacga tgagcatgtc
    11641 tggcttcttc gccatgggca cctagagtgt atgccagact gaatagcttg ccaattcgaa
    11701 agtgggcaga ggacaaggca aagatgcgcc aattttgaac gctcgtggaa atcgctggaa
    11761 aaatcgctac gctcggatag aataactgcc cggcagctct ggttatcagt caagaccaga
    11821 acgcttcttc actactcatc ttttccggga ggtgttctca tgaaatacgc agtcgaactg
    11881 tttggaacct tcgttctggt ctttgctggg gtcggcacgg cggtgctcgc cggagcgcaa
    11941 gtggggaatg ttggcgtggc aatggctttc ggcctctcgc ttctggccat ggcatatgcg
    12001 cttggaccgg tatcgggctg ccacatcaat cccgcggtaa cgttgggagt tctgctcagc
    12061 cgcagaatgt ctgccaagga agccatgggc tactgggtat cgcaggtgat cggggcgata
    12121 ctcggggccg gcgtggttct ctttattgcc aagggcgccg ccggtggata tgacccggtc
    12181 ctgaccgggt tcgcgacaaa cgggtacgcg gcccactctc caggacatta ttctctggct
    12241 gcttgctttg cggcagagat gctcctcacc atgttgctgg tcataacggt tctgtgcgcg
    12301 acagacgagc gcgcgccttc cggctttgcc ggcattccca ttggactgat tctcactgcc
    12361 atgatcctga cagggattcc ggttacaaac ggcggattca acccggcgcg cagcattgga
    12421 ccggcagtgt ttgtaggcgg atgggcgctg cagcaaattt ggctgttcat cgtggcgccc
    12481 atgctcgggg ccgtgctggc atcccgcata tacctgggca caaagagcag tcccgaaaag
    12541 aagctgcagg cacaagctgc ggccaaataa agcttttgtt tcagcggagg tgcaggccgg
    12601 gctgcatctc cgtcctgctt tctggttctc gcgtcggcta acatttgcct ttccctcccg
    12661 tcattccgtg tgtacactat tttgctctag gcctgttttg ataaggtata gatctgaatg
    12721 ggtattcaca attcatgacc gaccaacgtg atctttttcc cggcgcgctg gagctgatga
    12781 tcctgcagac cctcagacgc aaagccctgc acggctacgc cctggcccag cacatcaagc
    12841 aaacatcgga cgaccttctt caggtggaag aaggctctct ctacccggcg ctgcaaagaa
    12901 tgttgaaagc cggattggtg aaggctgaat ggggtatctc tgcaaccaac cggcgggtcc
    12961 gcacgtacca actcacgcct gcaggacgca agcatgtgga acgcgaactc tccagctttg
    13021 aacgcatgct ggaaggcatt actcgcgtgc tgacaccctc aaaacagaaa ggatgacgct
    13081 atgagctggt tcggccaaat gctcccacgc cacaaacatt atgacgatct atcggaggag
    13141 atacgtgggc acattgggga aagagttgag gatctggttg cagaagggct gtcgcgtgag
    13201 gacgctgaaa ccgctgcgcg gcgcgaattc gggaacacta cgctgctgca agagcgcgga
    13261 cgtgaggtgt ggcaatggaa catgtcggaa aacctgctgc gcgatatgaa acttgccata
    13321 cgtcaactgc ggcggaatcc gggcttcacc ttcaccgtgc tggtcacgct tgcgctggct
    13381 gttggcgcaa acactgccgt cttcagcctt gtcaatgtgc tgctggtccg tcccctgcct
    13441 tacacggagc cgcagcgact ggcagcggtg gtacgaaatc tcaagggcgt gaacccaagc
    13501 ggccaggtag tggacgatac cgaagacggc caggatggtg agacctggga actgattcgg
    13561 gatcacgtat ccgctgccca atttgctgcg gaatatcacg gcgccgacgg cgtgaacctg
    13621 gaggcgggca atcaggcgcg ttatgttctt gaccaccgag tttcagcgag ctactttgac
    13681 gtgctcggga tcaagccgct tctgggacgc ggcttcaccc aggaggaaga tagtccgcac
    13741 ggcccgaatg cggtgattct cagtcatgaa acctggaaat cattgtttgg ttctgatcga
    13801 gaaatcattg gccgggccat tcgcctaaaa ggcgagcctt acacgatcgt gggggtgatg
    13861 ccgcccaatc ttcagaccac agcggtcgcg gacctgtgga caccgctgcg accatggcgc
    13921 ggcggcgaag gtggcggcga caattaccgg gtccttgtgc gattgcgcga cggagccaca
    13981 tgggcggagc tgaacgcgca gctggcgccg atccatccgg agatgttcga taacttcttc
    14041 aaaggcgctt cgcttcgcct gctctcacga cctctgcaac aggaccttgc ggacgagaag
    14101 cgcgctccca ctctcatgct gatggccgcg gtgggattga ttctcctgat cgcctgcatc
    14161 aacattgccg gccttatgct ggtgaggctc tatcgccgcg acaacgagat ggccacacga
    14221 ctagcgctcg gggctacgcg actctccatt ttgaggcaga tatttatgga gccgctgctg
    14281 ctgacattag caggctcggc agcgggcgtg gcacttgctt acctcagcct gcgttccttc
    14341 gtgagcttat tccctgaaga tatgctgccc gttggatcga ttaacattga tggccgggta
    14401 ctgctgttca gcagtgtggt cggagtgatc agcgggttga tgatcggtat attccctgcc
    14461 atagcttcca accgcttcga gacccggccc tcactctgcg gcaaagcctc ggccagttcg
    14521 ccccagagca cccgcacgcg ctacatcctg atcgcgtgcg aagtctgcct cacggtcgtc
    14581 cttctcgcgg gcgcaggcat gctcgtacgc acgttggttt acctgcggac acttccaccg
    14641 ggattcgatt cacagaacgt taccgtcgcc aaggcgtcgc tcgacgacgc aagattccgc
    14701 gatccggcag cattccagaa acttctgcaa gcgagcctga actccatgcg gcgcattccc
    14761 ggagtggact cggccgcggt ggggctggga ctcccttatg agcggggcct gaacgacggc
    14821 ttcaagatcg cggacggccc cacagccggc acgtcgatgg tcagcagcgc gtcttacgtg
    14881 acgccggatt atttccgcgc tttacgcatt cctgtgctgg cggggcgagc ctttacacag
    14941 gaagatacgg ccgatacgcc gcatgttgcc attgtgaatg ccgcgttcgc ccgcaagttc
    15001 ttccggtcgg tggacgtgat cggccgccat ctccagttcg ggaaagatct ttgcaccgtg
    15061 gtaggtgttg ttggggatgt aaccaagcag cccgggatct ccatcactgc gccgctggca
    15121 accgagcccg tgtactacgt tccagccacg caagtatccg gtccattcct ggctttgatt
    15181 cacacctggt ttcagcccag ctggattgta cgtactcagg gcccgatctc cgggctaagc
    15241 gaacaaatgc aaagcgcact gcaggaagcg gcccctaatc tccccttttc cgcgtttcat
    15301 cagatgagcg atttacaagc caaggcactt gggcagcagc gtgtggaggt ggttctgctt
    15361 attggcctgg ctgcccttgc cctgcttcta gccgtagttg gcatttacgg gttggtgtca
    15421 aacctgatcg cgcagcgccg gcgcgaaatc ggcattcgca tggcactggg ttgcaccgtg
    15481 gtgcaggcga tgatcgcgag cggtcgcacc gggctgacag ccacttgcat tggcatggca
    15541 gcaggagcgg gcgcagcggc aattgcgctg cgggcaatga atactcagtt gttcggagtc
    15601 cgaagccttg atccggctac gctcggagcg gtatgcgtat tgcttctggt ggcggcatgc
    15661 tttgcgagtt ttgcacccac gctgcggatc gcgaggatca atccgtcagc cacattgcgg
    15721 agcgagtgac gaagaacagc gggcctgctg caggcagcaa gtcggcgtct atgatctgcg
    15781 acggattgat tacagcttcg tgatttcgaa aacatggcag tgccatgcgg aaacgtctaa
    15841 atacattccc cgcgattgca gatcggcgcc gttacgatca taaatagagt cgctcagcaa
    15901 atcgcgaact ctccactggc atccgcctaa gccgccaaat ggaagccgca cgtagcactg
    15961 gctctgatgc gccgcgtagt tcacagttac cagcagacgc ttgccttcgg gcgcctgcca
    16021 cgcgaaggcg atgaacgcgt cattgctcca gttcccctgc catgccgagt tgcactcgag
    16081 cagctgccac tcgccgttgc ggatgacggg cagcctgagc gcacgcagca cgcggtcgta
    16141 gaaggttttc aggtcttcgt tgatgggctc cacggggccg cgcaccagat gtggagagat
    16201 tcgcttggta gcgccttcga gctgtccctg gtggaagaag cgcagaccag gtgcaaagaa
    16261 ggtaatcacg gcggcggcct tgtgctggtc cagcgggaat gtggcagtgg cgcgtggctc
    16321 atcatggttt tcgagaaatc gagacatctt attctggtaa tcgagcccgg ccagaagatg
    16381 ctcccgcacg ggacgagcag cgccatgatg caggcgatcg taaagccttt tatcgtaggt
    16441 gtaattgaaa ccctgctgct gaagcgtcca ctccaggtcc caataaacct ccgccatgaa
    16501 aacgaaatca ggggaaagct tgcgcacttc ggtggttgcg cgaggccaga aaggctcgga
    16561 aggaatgccc caagtgcgct gaaaaacttc aggcaggatc agcatggcca tatcacaacg
    16621 gacagcatca cactggcccg caattttgag cagctcgcgc atcatcgctt tctgagtgtc
    16681 gaggttaccg tagttaagtt gaagcgtgtc cggccagccg gggaaatagg gatcgcggcc
    16741 gtaagcgaag atgcgattcc ctgcagcctc aagcctcaca taattctgtg gcgcacgagc
    16801 gagatcggcc tcggttccca tgacgaagta ctccgggtgt tcggcaaccc agggatggtc
    16861 gagtgccatg tggttgggaa cgaagtcgag cagcagtcgg aggccgcggc tgcgcaggcg
    16921 ctcccgcagt ctggcaagag cggcatcgcc tccgaggcgt tcatggacgg tgtagccggt
    16981 gatggcaaag ccggagccgg caatgtcttc gtcccggaga tccggcaagg tctcctcaaa
    17041 ctctttgcgc cattccggat tgctgcgcga gacgcgctgg gcggccagcc cggtttgcca
    17101 gacacttaga aaccatatcc actcgaatcc catctcggcc agacggtcaa attcggcatc
    17161 cgggatgtca tccagggtgg ctggccgatt cagcttgagt gataactcgg taagccagac
    17221 gcgcgtgttg atctggtaga gcatggggta aagactgcgc tcgttaattc tctcaggagc
    17281 agccggacgt ggcgcttcaa tctggatttc gggtgtgagt actggcatgg aattcctccg
    17341 gtccagttgg ccatctcagc agcgatcagg caatgccctg agggtgcggg actccaaaca
    17401 aattaatgtg tgcctcggcg cctcagactg ccactgtcaa cgatgacagt tcgcctgctt
    17461 ttcttctcat cctagaattc caatcagagg cctgctgcga agccgcgtca actcgcaagc
    17521 tgtgtgcaac aggacccaaa tcaaggcgag taaaggacgg gggacaacca tgacagcgag
    17581 tcagagaact ccatctgcat atattgaaac cattgaacag aagcggctca acgatgcccg
    17641 tgagctggga atcccatgga agaaatgggg gccttatctc agtgaaaggc agtggggcac
    17701 cgtgcgtgag gattacagcg agagcggtga cgcgtggaat ttctttaccc acgatcaggc
    17761 ccgctcgcgc gcctaccgct ggggcgagga cgggatcggc ggcatatccg atgataaaca
    17821 acacctctgc ctggccgtcg cactctggaa cgagcgcgac ccgatcctca aagagcgcta
    17881 ttttggtctg accaacggcg agggcaacca cggcgaggat gtgaaggaat actacttcta
    17941 tctcgatagc acgccgacgc actcctacat gaagtatctc tacaagtatc ctcaggcggc
    18001 ctttccttat gctgacctgg tggagacgaa ccgccgccgt acccgcaacg actttgagta
    18061 cgaattgatc gacaccgggg tgttcaatga cgacaggtac tttgacgtct ttatcgaata
    18121 cgcgaaagac ggtccagaag acctcctggt gcggatcacg acagtcaatc gcggccctga
    18181 tacggcggag ttgcatctgt tgccaacgct gtggttccgc aacgactggt cagcgtggat
    18241 tgccgcatcc aacagggctg cccagaagcc cgttcttaag cagatgaaga ccgacgcggg
    18301 aacgagtgcg gtagctgtag agcaccagat tctcggggaa tacatctttt cctgcgaagg
    18361 cgatgtgcca cttctgttca ccgaaaacga aaccaaccac gaaaggctgt tccatcaacc
    18421 aaatgaaagc ccccacgtga aggacggaat taacgattgc gtggtgcagg gcaagcagga
    18481 cgcggttgac cccgaaaagc agggtaccaa ggtggcggcc cactacaaga ttagtgtgga
    18541 tgccggtgag accaaagtga ttcgcctgcg gctctcgaag atctctccag accagaagag
    18601 caaagccttc gggaagcagt ttgatgaaat ctttggtgac cggctgcgtg aagccgatga
    18661 gttttacaag tcggtcaccc cgccaaggtc gggtgaagag gaagccagag tgatgcgcca
    18721 ggcccttgcc ggcatgcttt ggagcaagca gttcttcttc tttgatgggg ataactggct
    18781 ggacgagcat cactccaacc cgctccatag tggatttcgc gccgcccgca actcggagtg
    18841 gttccacatg ctgaacgagg acatcatctc catgcccgat aaatgggagt acccgtggta
    18901 cgcggcctgg gacctggcct tccacacgct tccgctctcc attgtggacc cggacttcgc
    18961 caagcagcag atggagttga tgctgcgcgc tgcttatctg caccccaacg gccaaatgcc
    19021 cgcctatgag tggaatttca gtgacgtgaa tcctcctgtg catgcgtttg caactctctt
    19081 tttgaaccgc actgagcagg cgctgcgcca gcagacggac gtggatttcc tgaaagcaat
    19141 cttcaacaag ctgctgctga acttcacctg gtgggtgaac cgcaaggacc gcttcggcaa
    19201 gaacgtgttc gaaggaggtt tcctggggct ggataatatc ggcgtcttcg accgcagcgc
    19261 gccgcttccc accggcggca acctggagca ggcagatggg acagcatgga tggccctgtt
    19321 cagccagaat atgctggagc ttgcgtttga gattgctcag catgacccca gctatgagcc
    19381 catgatcatg aagttcctgg agcacttcta ctacatcggt gccggcatga accggcgtga
    19441 tcagtacggc atgtgggacg atgaggacgg cttctactat gacctgctgc ggcttcccga
    19501 tggcagttct cagcggctca agatacgctc catggtcggc cttcttcctc tgtgcgctac
    19561 ctcggtggtt gaaaagcaga tacgagaccg cttcccgcag acgatggcct tggtgcagga
    19621 acgtctgcgc cggatacccg agctcaggga caccatccac cccaccggcc cagggcattt
    19681 tggcgtggca gaccgtggca ttctggcgct ggtcaacccg gaacggctta gacgcatttt
    19741 gaccaagatg ctcgacgaga acgaattcct gagcccttat gggatccgct cactgtccaa
    19801 gttccaccaa gagcacccgt tcgtcttaca ggtaaatggc caggaatacc gcgtggacta
    19861 tttgccctcc gagtcgaata ccggcatgtt cggggggaat tccaactggc gaggaccgat
    19921 ctggatgccc gttaataccc tgattatccg cgcactgctg cagtattacc tctactacgg
    19981 cgacaacttt aagatcgaat gcccgaccgg ttcaggcaag ctgatgaacc tgtttgaggt
    20041 gagtaaagaa atctctgacc ggctcacccg aatcttcact cgcgacgaac atggcaagcg
    20101 gcccgtctat ggcggcacgg agaagttcca aagcgatccc cactggcgcg atcacatcct
    20161 gttttacgaa tacttccacg gcgacaacgg cgccggactg ggcgccagcc atcaaaccgg
    20221 ctggaccggg gtggtagcca aactcatcca gctcttcggc attctcgatt ccaagcgtgg
    20281 gctgcaagtg ggcacccagg cagcgttcgc caaaccggcc gcagcgccgg aagacgaaaa
    20341 ggagacggtg gcagtggctt gatggagagg acacgcgacg tccacaaacc ataaacaggc
    20401 aaaaacgcca cagatgaacg cagatgaaca cggatcaagc acgaagatca tgcagtggac
    20461 gagtggaaaa caagatctgt gtaagtctgc gtacatctgt ggcgaagttt cgccacttaa
    20521 ctctgcatct cgctgcctcc gtggcgagtg tgatcttgtt cttctcgccg cttgtcagtg
    20581 cccaaactct ggctcctcgt gcctacgtgg tgacgcctgt agacaccaac gcgtttacgg
    20641 tcaccacgaa tctctacagg ggcgacattc tgttcgataa cagcgtgcct attgaagacg
    20701 ccagcggcac catctctctc tcggtgccta cgttctatca ttcgctcact ttcttccgcc
    20761 gctccgcgag cgttactgtt ggactgcctt atgccttggc aagtttgcgg gcgcgggtag
    20821 tcgatcagca agtggacaca taccgctctg gcctagggga tggtgcggtc cgcttctcgg
    20881 tcaacctgat gggcgggccg gccatgaagc tgccggaatt tatgaagtgg aagcagaaac
    20941 ggcttcttgg ggtaagcatc gttgtccagg ctcctacggg gcaatacgac ccgcggctgc
    21001 tgatcaacgt aggcaatagc cgctgggtaa tccatccgga gctgggctac tcagaacgcc
    21061 acggcaattg gctggtggac atttatagcg gcgtcatctt ctttaccaag acgccggagt
    21121 tcttttccca caacaatttt gttcctggaa agcaggaacg gacgcaggaa ccggttgaag
    21181 tggtggaggg ccatctgagc tacgacttca agccgcgcct ctgggtctcg ctcgacggaa
    21241 acttttggta cggcggacgt accaccctca atggcgtgga gaaccgcgcc agcctgcaaa
    21301 agaattcacg tgtcggcgcg acggccgcca ttcccattac gctgcaccag tcgatcaaat
    21361 tcagctacga tcgcggcgca gtgatccgtt ttggcgggaa gtaccaggcg gtagctgtgg
    21421 cgtggcagta cggctggatc gggagtttgt ggccaaaatg aagcgagcat tacccatgga
    21481 gcggtgagaa cagtttcgag aattaaacct tacaaccgca gtggtccatg tgatttcatc
    21541 ccacacggaa gcatgaaaaa ccggtgtgat ttaggctcgc gcgagacggc agcggagcag
    21601 ccccctcgtc gtgctcacct cgcaagctcg gctacgcact ctgtcggggt gggtccttca
    21661 tggggagaga gtctggaaag caacgacggg cacggatgag ggtggctctt ttagggcaga
    21721 tcaatgctga atcgcgtcac gacctttttt ggaagtgtca gctagtggtc ccactgggga
    21781 ccagcactgt cagcagctgc ggcagtactg cgggtaaggg cagtgcccgg gccgccggtg
    21841 ctcggattca tccagatgtt ccaggtgacg tttgtgttca ggctgttagt gccatccagg
    21901 gcgcgagttg aacaataaat tatcttgctg ccgtcggacg accagcttgg ctcgtagctt
    21961 ttggccgccg tcagagctgt gacgggatgg tctgcgcttc catcgctgtt tatcacccaa
    22021 acgtttagca cagtgccgcc ggcactactg ccatccaggg cgcgagagga gacataaacg
    22081 agtttgcttc catctgggga ccagaccgga ctgtctggga tcatgttgta cgggcctgag
    22141 aggtgggtga gaggcgtggg actggagccg tcagagttca tcacccagag attagcggcg
    22201 ccgatatcga cgtcgctgag attcagagcg cgagttgaga cgaacgcgat ctttttagca
    22261 tcgggcgacc atgcgacttg agagctggga gtgatgcggg atttggtgag cggctgcggg
    22321 ttacttccat cggcgttcat cacccagata ttgttgatgc ccatctcaat gtcaagtccg
    22381 gcaatggaac gcgacgaggt gaaaagaatt tttgttccgt ccggcgacca gacaggaaaa
    22441 acactaggcg caaaccgcaa cgtggtgagc gcggcagggc tggttccatc agcattcacc
    22501 acccagatgt tcgtggtggc accgatcatg ttgtagccct caagggcgcg agtggaatcg
    22561 tacgcgattt tagaactgtc cggcgaccaa ttggcgtgga tgctgctgac caacgtggtt
    22621 gtaagcctgg tgagcggtac tgagccggat ccgtcggcat tcatcaccca aatattgacc
    22681 gcgccgattg gggcattgct gccatcgagg gcgcgcattg aggtgtaggc gatcttcttg
    22741 ccgtcaggag accagacggg atcggctgag gaagcgccgg tggcggtgag ctgcgtaagg
    22801 ccgtgagcgt tcgtgccatc tgaattcata gcccagatat tggtggcagc attcgcagcg
    22861 tcagtattat tcagcgcgcg tgcggaggta aaaatgattg ccccctggga ttgaggaaca
    22921 acctcaatac gcggtgacat tgcacatccg caaattgcca gtgcaaggag cagaaatatg
    22981 caggagagca aatcatttct tttcacagca gccttcatgg cgcccctttc gtcgcaacca
    23041 gcgatgcatg gcaactcgcg cgcaaacgtg tccaccacta cggggtaccg gaggagacta
    23101 ccgtccgctc cttgaacgga agatgcaggc cgcggacgat ctccggccag aactctttcg
    23161 cgacgtccca gcccatgttg acgccaaagc tgactccgac acgcgtggcg gttgagccga
    23221 agccgcgatc attatcgggg tgataaaggt ttgccagtga ttgcacgctg accgtcgctg
    23281 cccagtgaga cagattgggc attctcgcgc catcgtcacg gcgtgccaca aaggtgtgcg
    23341 ctaccgcgtg ctcgagtcgc tcctttactg tgccggtacc aaggcgatag aaacgcgggt
    23401 cctgctgaaa tatggcggga taaaagaact ggccaaagaa attccgctgc gcgcgatcca
    23461 cataagcagc gccgtagcgt ttgccatatc cttcagctcc ctgcccccac tccttgtcat
    23521 cgttgttcca ttgggagaag cctgcgctcg cagcggcgcc aatgaaggtg accggatcga
    23581 gtgttgtctt gtaaaagaga cgaaacttct gcccgatatc gaggccacaa atgtcatttc
    23641 cgtccctgac gtgcgtgggg acggtggtca tctccggcct gcgggtgaac cttgcggtga
    23701 accgctcgag agggccgctg tactcgcggg cagaaaagag ctttgccggt ttctcacagg
    23761 ggaggggccc ggccgaagat ggcgactcac caattctgct acccgatgaa gaaccgtaat
    23821 gcgagtgcgt acgcgatgag ctctcgcctt tttcgtccgt cgccatcacg aacctgggat
    23881 ctgccggcag cagcgaatag ctgccttcac tgagtccgtg caagctcata acaacagccg
    23941 cattgccggg tgcagcaggc gaggcttcgc cgctttgagc cacggccgca agactaaaga
    24001 gcagcaggaa aggaagaaca acgatcaggc gcttagtcat ggtgccccct tgggaccttc
    24061 aggcagcacg tttcaggctt tccaatgcaa atgggatcgg ctgcaattcg tgaccctgcc
    24121 tgagtccaca aatccaccgt acttccacgc aggtctacgc ggaactgaca ggtttgacag
    24181 gtgcagaggg gctggaccgg cggctgcgaa ttacatcggc gcaactgaaa ccaggttcga
    24241 gcatagattg ccgggcgcga agttggcgcg cacggattcg ttcaaatgaa actggctctg
    24301 ctggtcgccg cagaagttta cggtgttgga cagaccattg ttcttgaagc tgactgtggt
    24361 tactgggacg ggctgaaagt tgacgtcatt gacagatccg agctgtacca cgatcacgat
    24421 tccactcaca c
//
LOCUS       DASQYP010000421         5742 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_253783, whole genome shotgun sequence.
ACCESSION   DASQYP010000421 DASQYP010000000
VERSION     DASQYP010000421.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 5742)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5742)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5742
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_253783"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..796
                     /locus_tag="VE783_13690"
     CDS             <1..796
                     /locus_tag="VE783_13690"
                     /EC_number="2.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF015679.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042834 - peptidoglycan binding [Evidence
                     IEA];
                     GO_function: GO:0071972 - peptidoglycan L,D-transpeptidase
                     activity [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="L,D-transpeptidase"
                     /protein_id="HYX54505.1"
                     /translation="RQVELARIEESASRPTTFAQIGTSTPSSIAKSAANPKLTASGNL
                     PATGAPPSKTSEVRLNTTADSAKAADQASAAEVAAEKLASQLPAQKPAPTKDGQTRQV
                     VISIADRKLALIEEGRTVKTYAIAVGARYTPSPDGDFTVINHAKDPTYRHKGKEILPG
                     KENPLGTRWIGLSQKGYGIHGTNVPSSIGKAASHGCFRMGKQDVEDLYSRVQVGDTVT
                     VRRERDAMIARVFPDENQNAAGGEVQVAAANSSAAGVNATATQVQQ"
     gene            822..1139
                     /locus_tag="VE783_13695"
     CDS             822..1139
                     /locus_tag="VE783_13695"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX54506.1"
                     /translation="MTNPQIIGGNKAGTAVTGEPAVCPEHQGGLPDQSLPRSPQSPTS
                     PGVGLVGLASPGSPTSPDVGLVGVALPERPSFTQWWREYQEKMRSAQESFLACHPLQQ
                     FVS"
     gene            1561..2721
                     /locus_tag="VE783_13700"
     CDS             1561..2721
                     /locus_tag="VE783_13700"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX54507.1"
                     /translation="MLLLSVFGAAQENAAAAASATEFAQNILARAGNPQSMSVAFQNI
                     SVLLPEMQESVQNAIFTAFRNANVRLVKPEQSTVQTDIIFSEDWQGYLWIANIQSGAN
                     KQMVMKKVARPERAASARAPVLTIRKNTVWQQDGPILDFYLDNQQLVLLEPSQISIYA
                     GEGGQWRPRFTLAVVHPEGWPRDLRGRLIVNGSQITAFLPGTRCTGSTSPPTLDCRAS
                     DDPWQIDQSGLAGFFSPRRNFFTGILAGSSAGASVIPFFSAAAWQSGDLRQWMFTGTD
                     GRARFYQYDLSAPIAIFNNWGGNMAAIRSSCGSGTQLLMSSPNDSVRPDAVQAVEVLG
                     REALPVSTPVELAGAVQSMWTAGKNNELVNGVMLVPGTGRYEGFTLSVACGR"
     gene            2684..4123
                     /locus_tag="VE783_13705"
     CDS             2684..4123
                     /locus_tag="VE783_13705"
                     /inference="COORDINATES: protein motif:HMM:NF012706.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HYX54508.1"
                     /translation="MKVSRLASLAAVSLVLAFTAQASSRPRYGGTAHVVLRDRVNTLD
                     PLGEEDHPATRDRMMALVFEGLTSMDAEGRLRPGLATWWQSDANKRVWHFHLRLAQFH
                     DGSALTASDAVASLQRSMSEWKITATDRQTISIDATAPAPHLPELLALPRFAIAKKTP
                     ENTLFGTGPYKFSEWQPGERLVLTTNDDYWGGRPFPDAIEFQMGVPLRDQLLERQLGP
                     YAAAELTVDQVRSLEQSSQNVMISRQSDLFAIVFLQTDDASATRGRKPVDPRIREALA
                     NTVNRNAITNVILQKRAAAASGLLPQWLTGYESLFPANSNIDRAKELRSETAALIIIP
                     PIALAYDASEPTSKLLAERIALDAREAGIVVQPFGEAHVGNKQARSSLNADAVLVRLP
                     LASTEPSIALAARMDEMGLLPEHAAFNVRADQPEQLFDLESKTLQSFRVIPIAHASQA
                     VWLSPVTHNWQLSPTGTWQLDQLWVEGAR"
     gene            4123..>5742
                     /locus_tag="VE783_13710"
     CDS             4123..>5742
                     /locus_tag="VE783_13710"
                     /inference="COORDINATES: protein motif:HMM:NF012722.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing protein"
                     /protein_id="HYX54509.1"
                     /translation="MSLNTKLLLLVALSITASVGAVAFLIEARTHEAFRQIEQERTSS
                     LVNQFRREFDHEGEEITHAVEAIAASDSMLRTSMELTNGADYANFVNEAATYAQAHRL
                     DFLDLVSPDGTIVSSAHWPARFGYKERWFLDAAVPHQAFLKHIETPQGNALAMLCVRP
                     VKTHSANFYLAGGRRLDTVLQPLSPPQGLRVSIYSSPPDSPGELLGPAKDNLGIEKLK
                     PLIDQVVAKRSEDSMTLDWGPGAPQEEIMHAIPLQGFADRIPAILLVGNALDQELTLE
                     RRIRNISLAIAGIGVFVGILLAGIVAARISRPVKKLAIAAAEIGQGNWEVEVKTSSKD
                     EVGRLAAAFNQMTHELITQREKLVQTERVAAWRELARRLAHELKNPLFPLQVTVENLL
                     RARESAPDQFDEVFRESTATLLAEISNLKTIIGRFSDFSKMPAPQLQPVDLDAMIKNV
                     VQLFQGQLTNRANKIEPVLQLDHLPPVNGDPVLLRRVIDNLVLNAIDAMPSGGKLTFR
                     TALREKVAVLELADTGKGLTPEECERIFTPYY"
BASE COUNT         1181 a         1777 c         1699 g         1085 t
ORIGIN      
        1 gcgccaggtt gagctggcga ggattgaaga aagcgcctca cggcctacaa cgtttgccca
       61 gatcggcacc agcacgcctt cgtcgattgc caagtccgca gcgaatccca agctcacagc
      121 aagcggcaac ctcccggcta ccggtgctcc tcccagcaaa acttccgagg ttcgtttgaa
      181 caccactgct gattcagcca aggctgccga ccaggccagc gccgccgaag tcgcggcgga
      241 aaagcttgct tcccaacttc ccgcgcagaa gcccgcgccg acaaaagacg gccaaacgcg
      301 gcaggtcgtc atcagcattg ccgaccgcaa gctggccctg attgaagagg gccgcacggt
      361 gaagacctac gccatagcgg tgggcgcgcg ctacaccccc agccctgacg gcgacttcac
      421 cgtgatcaat cacgccaagg accccaccta tcgccacaag ggaaaagaga ttctgccggg
      481 caaggagaat ccgctgggca cgcgctggat tggcctgagc cagaaaggct acggcatcca
      541 cggcaccaac gtgccgagtt ccattggcaa ggccgcctca cacggctgct tccgcatggg
      601 caagcaagac gtggaagacc tctactcgcg tgtgcaggtg ggcgatacgg tgaccgtgcg
      661 gcgcgaacgc gacgccatga ttgcccgtgt gttcccagac gaaaaccaga atgctgccgg
      721 cggcgaagtc caagtggctg ccgcgaactc gtcagcagca ggtgtgaacg cgacagcaac
      781 ccaggttcag cagtaagcgc ttagtaaatc ggagagcagt catgaccaac cctcaaatca
      841 tcggcgggaa caaagcgggc actgcggtga ccggagaacc ggctgtatgt ccggagcatc
      901 aagggggtct tccggaccag tcgctgcccc ggtcacctca gtccccgaca agccccggtg
      961 ttgggcttgt tgggctggca tcaccggggt ccccgacgag ccccgatgtt gggcttgttg
     1021 gggtggcatt accggaacgc ccgagcttca cgcagtggtg gcgggagtac caggagaaga
     1081 tgcgcagcgc gcaggagagc tttctcgctt gccatccgct ccagcagttt gtgagttgaa
     1141 aagacgttgt ccggcaaccg ccggcgctgc tccatatagc gacttccatc aggcaaatcg
     1201 ccaaccagcg aacctgagct agagcagcag ccgtgccgga catcagcagc aggttcgtgc
     1261 ggtctggctg ccggaaatcc tgggccacca gtggcggtga cgggtggccg ggacgaaggc
     1321 acagagtgag tcagaccgcg cggacctgca attgcgcttg ataagtttcg ccggaaattc
     1381 aaacgggcgg cggtctccgc cgggaccttg gccgcccgtc cggtgaaggt gacgaaagga
     1441 tgtatgtggc ctttccctga ttgccaaagc accgcatttc cagttcaatt gaaagcgaaa
     1501 cacccgcaaa ttttgctcat gcccatccgc tcatcagcgc gcttttgctg cgtcttgtgt
     1561 gtgcttctgc tttcagtctt cggggctgcg caggagaatg ctgctgctgc cgccagcgca
     1621 acggagtttg cgcaaaacat cctggcgcgt gcgggcaatc cgcaaagcat gagcgtggcc
     1681 ttccagaaca tttccgttct tctgccggag atgcaggagt ccgtccagaa cgccatcttc
     1741 actgcgtttc gtaacgcgaa tgtgcggctg gtgaagccgg agcaatcaac cgtgcaaacg
     1801 gacatcatct tttctgaaga ctggcagggc tacctgtgga tcgcgaatat tcagtccggc
     1861 gcgaacaagc agatggtcat gaagaaggtc gcccggccgg aacgcgccgc gtcggccagg
     1921 gcgccggtgc tcaccatccg caagaacacc gtgtggcagc aggatggccc gatcctggat
     1981 ttctatctcg ataatcagca gctcgtgctg ctggagccgt cccagatttc gatttacgcg
     2041 ggcgagggcg gccagtggcg tccgcgattc acgctggcgg ttgtgcatcc ggaaggctgg
     2101 ccgcgtgacc tgcgcggcag gctgattgtg aatggatcgc agatcactgc tttccttcct
     2161 ggaacgcgct gcaccggctc cacttcgcca cccacgctcg actgccgcgc cagtgacgat
     2221 ccctggcaga tagatcaatc cgggctggcc ggatttttca gtccgcgaag gaatttcttc
     2281 accggaattc ttgccggctc cagtgcggga gcatcagtga ttccgttttt ctccgccgcc
     2341 gcgtggcaga gcggtgatct ccggcaatgg atgttcaccg gcactgacgg ccgcgcccgc
     2401 ttttatcaat atgatctctc cgcgcccatc gccatcttca acaactgggg cgggaacatg
     2461 gcagccattc ggtcttcgtg cgggagcggc acccagttgc tcatgagctc gccaaacgat
     2521 tccgtgcgcc cggatgccgt gcaggcggtt gaggtcctcg gccgcgaggc gctgccggtg
     2581 agcactccgg ttgaacttgc cggggcggtg cagtccatgt ggaccgcggg caagaacaat
     2641 gaattagtta acggcgtaat gctggtgccg ggaacaggga gatatgaagg tttcacgctt
     2701 agcgtcgctt gcggccgtta gtctcgtgct cgccttcacg gcgcaggcga gctcgcgtcc
     2761 gcgctatggc ggaacggcgc acgtcgtatt gcgcgatcgc gtgaacaccc ttgatccgct
     2821 gggcgaagaa gaccatcccg ccacccgcga ccgcatgatg gcgctggtct ttgaaggctt
     2881 aaccagcatg gacgccgaag gcagattgcg gcctgggctc gccacatggt ggcagtcgga
     2941 tgcgaacaag cgcgtctggc atttccatct gcgcctggcc cagttccatg acggttcggc
     3001 actcaccgcc agcgatgccg tcgccagcct gcaacgcagc atgagcgagt ggaagattac
     3061 ggccactgac cggcagacaa tttccatcga tgccactgct cccgcgccgc acctgcctga
     3121 gctgcttgcg ctgccgcgat ttgccattgc gaagaaaacg cctgagaaca cactcttcgg
     3181 aaccggccca tacaagttca gcgaatggca gcccggtgag cgcctggttt tgacgacgaa
     3241 tgacgattac tggggcggac gtccgtttcc tgatgccatt gaatttcaga tgggcgtgcc
     3301 gctgcgcgac cagctgctgg aacggcaact cggcccttat gcagccgcgg agctcaccgt
     3361 ggaccaggtt cgtagtctcg agcagtcaag ccagaacgtg atgatctccc ggcagagtga
     3421 tctcttcgct attgtctttc ttcagaccga cgacgcctcc gcaacccgag gacgcaagcc
     3481 tgtggatccc cgtattcgtg aagcactggc caacaccgtg aatcgcaatg caatcaccaa
     3541 tgtgatcctg cagaagcgcg cagctgcggc gagcgggctc ctgccgcagt ggcttaccgg
     3601 ctacgagtcg ctgtttccgg caaacagtaa tattgatcgc gcaaaagagc tgcgatcaga
     3661 aacagccgct ctcatcatta ttccccccat tgcgctcgcc tacgatgctt ctgagcccac
     3721 ttcaaaactc ttggccgaac gcatcgccct cgatgcgcgc gaagcaggaa ttgtggttca
     3781 gccgtttggt gaagcgcacg tcggcaacaa gcaggcgcgc agctcgctca atgcagacgc
     3841 ggtgcttgtg cgcctgccgc ttgcgtccac cgagccttca atcgcgctgg cagcgagaat
     3901 ggatgaaatg ggcctactcc ccgagcacgc cgcattcaat gtgagagccg accagccgga
     3961 acaactcttc gatcttgaga gcaagacact gcaaagtttc cgtgtaatcc ccatcgcaca
     4021 cgcctcccag gcagtctggc tcagccccgt cactcataat tggcagctct cgcctaccgg
     4081 aacctggcag ctcgaccagc tctgggtgga gggagcgcgc tgatgtcgct caataccaaa
     4141 ctgctgctcc tggtcgcact gagcatcacc gccagcgtgg gtgctgttgc gttcctgatt
     4201 gaagctcgca cccacgaagc ttttcgtcag atcgaacagg agcgcacctc cagtttggtg
     4261 aaccagttcc ggcgcgagtt cgatcatgaa ggcgaagaga tcacccacgc cgttgaagca
     4321 atcgcagctt cggattccat gctacgcacc agcatggagc tgaccaacgg cgccgattac
     4381 gccaacttcg ttaatgaagc tgcgacttac gcgcaggcgc accgtctgga tttcctcgat
     4441 ttggtctcac ctgatggaac catcgtctcc tccgcccact ggcccgcgag gttcggctac
     4501 aaggagcgct ggttccttga cgcggcggtt ccccatcagg catttctcaa acacattgaa
     4561 actccgcagg gcaatgccct ggccatgctg tgcgttcgcc cggtgaagac gcacagcgca
     4621 aacttctatc tggcaggcgg gcgcaggctt gatacggtgc tgcagccgct ctcgccgccg
     4681 cagggcttgc gcgtctccat ctacagctca cctcctgatt ctccgggcga actgttgggt
     4741 ccggcaaaag acaacctcgg gatcgagaag ctgaaaccgc tcatcgatca ggtagtcgcg
     4801 aaacgtagcg aagattcaat gacactcgac tggggccccg gcgcgccaca ggaagagatt
     4861 atgcacgcca tcccgctcca gggattcgcc gatcgtattc ccgccatctt gctcgtgggg
     4921 aacgcgctgg atcaggagct cacgctggag cggcgcatcc gcaacatcag tctggctatc
     4981 gccgggatag gagtctttgt cggaatattg ctggcgggaa tcgtggctgc gcgcatcagt
     5041 cgtccggtga aaaagttggc cattgccgcg gcggaaatcg ggcaaggcaa ctgggaggtt
     5101 gaagtcaaga cgtcatcaaa agacgaagtc ggcaggcttg ccgccgcctt caaccagatg
     5161 acgcacgagc tcatcacgca gcgcgaaaag ctggtgcaga ctgagcgcgt ggcggcgtgg
     5221 cgggagctcg cccggcgcct ggcccatgaa cttaagaacc cgctgtttcc gcttcaggtc
     5281 accgtggaaa atcttttgcg cgcacgagaa agcgctccgg atcaattcga cgaagtgttc
     5341 cgcgaaagca ccgccaccct gctggctgag atcagcaacc tgaagacgat cattggccgc
     5401 ttcagtgatt tctccaaaat gccggcgccg cagcttcagc ccgtggatct ggacgccatg
     5461 attaagaacg tggtccagct tttccaggga cagctcacca accgcgcgaa taagattgaa
     5521 ccggtgctgc aactcgatca ccttccgccc gtgaacggcg atcctgtgtt gctgcgccgc
     5581 gtgatcgaca acctggtgct gaacgcgatt gacgctatgc ccagcggcgg caagctgact
     5641 ttccgtaccg cgctgcgcga aaaagtcgca gtgcttgagc tggccgacac cggaaaaggg
     5701 ctcacgccgg aagaatgcga gcgcatcttc actccctact ac
//
LOCUS       DASQYP010000422         2512 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_253969, whole genome shotgun sequence.
ACCESSION   DASQYP010000422 DASQYP010000000
VERSION     DASQYP010000422.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 2512)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2512)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2512
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_253969"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..400
                     /locus_tag="VE783_13715"
     CDS             <1..400
                     /locus_tag="VE783_13715"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX54510.1"
                     /translation="ILLLGSAGCNKLRARDQLNKGVQAYRSAQYEAAIEHFKNAVDLD
                     SDLKVAKLYLATAYAQQYVPGVDTPDNVRNAQLAIEEYKKVLENDPKSVNSLKGIAFL
                     YMQQKSSSRHASITRKPLRPIPTILKCTTP"
     gene            385..819
                     /locus_tag="VE783_13720"
     CDS             385..819
                     /locus_tag="VE783_13720"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX54511.1"
                     /translation="MYYSVGVIDWSQSYKDAADLKAANGMKVDDELKGKGSQKWCDQL
                     KDKDGPIIDEGTKMLQTAIDKRQDYDDAMAYLNLIYRRKANDMSCDDAQARADLKKEA
                     DDWSEKAMTARKKKAEEAAKKNQGGIVLDQPQGQQGGGQPKK"
     gene            930..2456
                     /gene="accC"
                     /locus_tag="VE783_13725"
     CDS             930..2456
                     /gene="accC"
                     /locus_tag="VE783_13725"
                     /EC_number="6.3.4.14"
                     /inference="COORDINATES: protein motif:HMM:NF006367.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009317 - acetyl-CoA carboxylase complex
                     [Evidence IEA];
                     GO_function: GO:0003989 - acetyl-CoA carboxylase activity
                     [Evidence IEA];
                     GO_function: GO:0004075 - biotin carboxylase activity
                     [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase biotin carboxylase
                     subunit"
                     /protein_id="HYX54512.1"
                     /translation="MFNKVLIANRGEIALRVIRACQEMGIATVAVFSDVDRAALHVTA
                     ADEAYLLGPAPARESYLNVAKILEIAHRSGAQAIHPGYGFLSENAGFARACKEAGIKF
                     IGPPASAMELMGSKTRARQAMQAAGVPFVPGSSKGLTFAEADALATKIGYPVMIKAAA
                     GGGGKGMRMVVNPADLKSAFETAQSEAQRSFNDSEVYLEKYISNPRHIEIQVLADEHG
                     NAIFLGERECSVQRRHQKVIEEAPSAIVDEDMRGRMGAVAVQAAKSAGYANAGTVEFL
                     VDAQRNFYFLEMNTRLQVEHPVTELVTGLDLVHLQLRIAAGEKLPLTQDQVHLRGHAL
                     ECRIYAEDPDNNFFPSPGKIRRLLQPSGPGVREDCGVYEGWTVPLDYDPMLSKLIVHA
                     PDRQMAIARMQRAINEYFVGGIKTNLTLFRRILAHPDFQAARIDTGFLDRLLSAKSPA
                     SSTPDSSTEDTAAIAAALFTATAKPPANGSGKTTNGNGSQNGASAWKKAARLEGVREP
                     "
BASE COUNT          605 a          736 c          705 g          466 t
ORIGIN      
        1 catccttttg ctgggttcag caggatgcaa caagctccgg gcccgcgacc agctcaacaa
       61 gggcgtccag gcttaccgca gcgctcagta cgaagctgcc attgagcatt tcaagaacgc
      121 tgtcgacttg gatagcgacc tcaaggtagc caagctctac ctcgccaccg cctacgcgca
      181 gcagtacgtt ccgggcgtgg acacgcccga caacgtccgc aacgcccagc tcgcaatcga
      241 ggaatacaag aaggtccttg agaatgatcc caagagcgtg aacagcctca agggcatcgc
      301 attcctgtac atgcagcaaa aaagttcgag caggcacgcg agtattacaa gaaagccatt
      361 gaggccgatc ccaacgatcc tgaagtgtac tactccgtag gcgtcatcga ctggtcacag
      421 agctacaagg acgcggctga cctgaaagcc gcaaacggca tgaaagtcga tgatgagctc
      481 aagggcaaag gcagccagaa atggtgtgac cagctgaaag acaaagacgg cccaatcatt
      541 gacgaaggca ccaagatgct tcagaccgcc attgacaagc gccaggacta tgacgatgcc
      601 atggcctacc tgaacctgat ctatcgccgc aaagccaatg acatgagttg cgacgatgcc
      661 caggctcgcg ccgacttgaa gaaggaagcc gatgactgga gcgaaaaggc catgaccgcg
      721 cgcaaaaaga aggcggaaga agcggccaaa aagaaccagg gtggcattgt gcttgatcag
      781 ccgcaggggc aacaaggcgg cggccagccc aagaagtagc tctcttctgg acacccagcc
      841 cctctgcgga ggggcttttt cttgccgtga tccacggcac agcccgaatc gccgagttca
      901 attaaaattg agttttgcga tttctatcta tgttcaataa ggtcctaata gcgaatcgtg
      961 gcgaaatcgc actgcgcgtg attcgcgcct gccaggaaat gggcatcgcc acggttgcag
     1021 tcttctccga tgtggatcgc gccgcgctgc acgtaaccgc ggctgatgaa gcttacctgc
     1081 tcggtcccgc gcccgcgcga gagtcgtacc tgaacgttgc gaagattctg gagatcgcac
     1141 accgctccgg cgcgcaggca attcatcctg gatacggctt cctctcagaa aatgccggct
     1201 ttgcccgtgc ctgcaaggaa gcagggatca agttcattgg gccgcccgct tcagccatgg
     1261 agctgatggg atcgaagacg cgcgcacgcc aggccatgca ggctgccggt gtgccattcg
     1321 tgcctggatc atcgaaaggc ctcacctttg ctgaagccga tgcactggcc acaaagatcg
     1381 gctatcccgt aatgatcaaa gctgctgcag gcggcggcgg caagggcatg cgcatggtgg
     1441 tgaacccggc ggacctgaag tcggcctttg aaaccgccca gagtgaagca caacgctcct
     1501 tcaatgattc tgaagtgtat ctggaaaagt acatttccaa cccgcgtcac atagaaattc
     1561 aggttctggc ggacgagcac gggaatgcca tcttcctggg tgaacgcgag tgctcagtgc
     1621 agcgccgcca ccaaaaggtg attgaagaag ctccatcagc aatcgtggac gaagacatgc
     1681 gcgggcgaat gggtgcagtg gccgttcagg ccgccaaatc cgccggttat gccaacgccg
     1741 gcacagtcga gtttctggta gacgcccaac gcaatttcta cttcctggaa atgaacacac
     1801 gccttcaggt ggagcatccg gtcactgaac tggtcacggg gcttgacctg gtccacttgc
     1861 agttgcgcat tgcggctggt gagaagctgc cgctgactca ggaccaggtg caccttcgcg
     1921 gacatgctct tgaatgccgt atttacgccg aagatcctga caataatttc tttccttccc
     1981 cgggaaaaat ccgccggctg cttcagcctt ccggaccagg tgtccgcgag gactgcggcg
     2041 tttatgaggg ctggactgtc ccgctcgact acgatcccat gctttccaag ctgatcgttc
     2101 acgctcctga tcgccagatg gcaatcgcgc gcatgcagcg agcgatcaat gaatacttcg
     2161 tcggcgggat aaagaccaat ctcacgctgt tccgcagaat tctcgcccat cctgactttc
     2221 aagccgcccg cattgatacc ggctttcttg accgcctgct ctcggccaaa tctccagctt
     2281 cgagcacacc agacagcagc acagaagata cagccgccat tgccgcagcc ctcttcacgg
     2341 cgacagccaa accgccggcc aatggttcgg gaaaaacgac caacggcaat ggttcacaga
     2401 atggcgcatc ggcatggaag aaggccgccc ggctggaagg agtgcgcgag ccatgattta
     2461 tgaggtcgcg gtcgccggca aaacccataa gctggagctt ctgcgcgaag gg
//
LOCUS       DASQYP010000423         4042 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Limnocylindrales bacterium isolate
            SMAG_U11068 k141_105516, whole genome shotgun sequence.
ACCESSION   DASQYP010000423 DASQYP010000000
VERSION     DASQYP010000423.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946545
            Sequence Read Archive: SRR5923187
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Limnocylindrales bacterium (soil metagenome)
  ORGANISM  Candidatus Limnocylindrales bacterium
            Bacteria; Chloroflexota; Candidatus Limnocylindria; Candidatus
            Limnocylindrales.
REFERENCE   1  (bases 1 to 4042)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4042)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,749
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,713
            CDSs (with protein)               :: 2,713
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 23
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 1 of 11
            Pseudo Genes (incomplete)         :: 10 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4042
                     /organism="Candidatus Limnocylindrales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_105516"
                     /isolate="SMAG_U11068"
                     /isolation_source="soil"
                     /db_xref="taxon:2952938"
                     /environmental_sample
                     /lat_lon="33.62075 S 150.73423 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2678
                     /locus_tag="VE783_13730"
     CDS             <1..2678
                     /locus_tag="VE783_13730"
                     /inference="COORDINATES: protein motif:HMM:NF014910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="FAD-linked oxidase C-terminal domain-containing
                     protein"
                     /protein_id="HYX54513.1"
                     /translation="PVLPRGAGTSLAGQCCNVAVVLDFTKYMNRVLEISPEEKFARVQ
                     PGIVLDVLLKQTEKHQLIFAPDPSTHSRCSIGGMIGNNSCGTHSLIGGKTVDNVEELR
                     VLLYDGTELTVGATGVAEYEQILRSGGRRAELYSGLRVLRNKYAELVRARYPRIPRRV
                     SGYNLDELLPEQGFHVARSLVGTEGTCAVVLEAKLKLIHSPQHRTLVVLGFPDAFIAA
                     DHVPQILEFNPIGLEGFEGSIVEGLRQKGAPNLDLLPPGGGFLLVEFGADNPAESRNA
                     AEQMIAKMTSLPCAPEARIYAGAQSKLIWQIRESGPRAAAFAPGAPAEWEGWDDAAVA
                     PEKLGGYLRDIRKLMDEYKYLGAMYGHFGHGCIHTRISFDLESESGIRKYSEFIGRAA
                     DLVVSYGGSLSGEHGDGQSRAALLPKMFGPEVVQAFHEFKALWDPQNKMNPGKVVNAY
                     LPTENLRLGADYKPWQPKTYFSFAEDAGSFAKATLRCLGLGACRKHEGGTMCPSYLAT
                     MEEEHSTRGRAHMLFEMLQGEVVRDRWQDEHVKQSLDLCLSCKACKTECPANVDMATW
                     KAEFLSHYYERRRRPLRSLAFGLVDRWAALASISPEAANFATSNPFIGAIARKAIGIA
                     PQRQLPVLAKHTFRSWVRERQPNVELGPLAQKVILWPDTFNNYFHPETAQAAYNLLSS
                     AGFRVIVPQHHFCCGRPLYDFGMLDRARRYLREIMDKLGPQIDAGVSVVVLEPSCASV
                     FRDELTGIFPKEERARKLSQQTFLLSEFLERIGYEPPHFKATILLHGHCHHKSLMKMT
                     AEEKLLTSMGAQISAPDTGCCGMAGPFGFEKEKYEVSQKIGERVLLPAVRAADESTLI
                     VADGFSCREQISQATGRTTLHLAELLALAQKNAPR"
     gene            complement(2690..3022)
                     /locus_tag="VE783_13735"
                     /pseudo
     CDS             complement(2690..3022)
                     /locus_tag="VE783_13735"
                     /inference="COORDINATES: protein motif:HMM:NF020123.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0016209 - antioxidant activity [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="redoxin domain-containing protein"
     gene            complement(3035..3484)
                     /locus_tag="VE783_13740"
     CDS             complement(3035..3484)
                     /locus_tag="VE783_13740"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HYX54514.1"
                     /translation="MTETIQRNNTALWLGFFALLLAVGSIGLFFVSTPFQPALPWLSP
                     LLALAAVIVTVVGLRRAQSEPGIYSGKAAGWTLTTITSLVLLLGIFFFYSARHIPAAN
                     SAPQVGQKAPEFTLPDTNGQSVSLGQLLAANQPPPKAVLVVFYRGYW"
     gene            3618..3992
                     /locus_tag="VE783_13745"
     CDS             3618..3992
                     /locus_tag="VE783_13745"
                     /inference="COORDINATES: protein motif:HMM:NF039485.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YidB family protein"
                     /protein_id="HYX54515.1"
                     /translation="MGIFDKVENAIGGQTGVNEEQHNTLLQTAMQMFANRGGIGTLLS
                     NAQSSGLSSIVQSWIGRGENQPINAEQTTQLVGQDRLQQLASRVGVPPAIASMVLSRV
                     LPSVVDHATPEGKVPEHDQSAA"
BASE COUNT          849 a         1185 c         1222 g          786 t
ORIGIN      
        1 ctcctgtgct gccccgtggt gcgggcacca gcctggccgg gcagtgctgc aatgtcgccg
       61 tggtgctcga tttcaccaag tacatgaatc gggtgctcga gatctcaccc gaggagaaat
      121 ttgcccgcgt gcagcccggg atcgtgcttg atgttctgct aaagcagaca gagaagcacc
      181 agcttatctt tgctcccgat ccttccaccc acagcaggtg ctccatcgga gggatgatcg
      241 gcaacaactc ctgcggcacc cattctttga tcggcggcaa gacggttgac aacgtggagg
      301 agctccgcgt cctgctctat gacggaacgg agctcactgt tggtgcgacc ggagttgcag
      361 agtacgagca gatcctgcga tcgggaggac gccgagccga actctactcc ggtctgcgcg
      421 tcttgcgcaa caaatacgcc gagttggtgc gagcacgtta tccgcgcatt ccgcggcgtg
      481 tatccggcta caacctcgac gaactcctgc cggagcaggg atttcatgtc gcgcgctcgc
      541 tggtcggcac cgaaggcacc tgcgcggttg tgctcgaggc gaagctgaag ctgatccaca
      601 gtccgcaaca ccgaacactt gtagtgctcg gctttcctga cgccttcatc gccgctgatc
      661 acgttccgca gattctcgaa ttcaacccaa tcggacttga ggggtttgaa ggcagcatcg
      721 tagaaggcct gcgtcagaag ggcgcgccca atctcgatct gcttcccccg gggggcgggt
      781 ttctgctggt ggaattcggt gcggacaatc cggcagagtc gcgcaatgcc gccgagcaga
      841 tgatcgcgaa aatgacgagc ctcccatgcg ctcccgaggc gcgtatctac gccggagctc
      901 aatccaagct gatctggcaa attcgcgagt ccggcccgcg cgcggccgct tttgccccgg
      961 gagcgccggc cgagtgggaa ggatgggacg atgcggcggt cgcgccggaa aagctcggcg
     1021 gatatctccg cgacatccgc aagctcatgg acgaatacaa gtacctgggc gcgatgtacg
     1081 gccacttcgg ccatggctgc attcataccc gcatcagctt tgatctggaa agcgagtccg
     1141 gcatccgcaa atactcagag ttcattggcc gcgcggctga cttggttgtg agctatggcg
     1201 gttcgctttc cggcgagcac ggtgacggac agtcgcgggc agccctgctg ccgaagatgt
     1261 tcgggccaga agtggtgcag gccttccatg aattcaaggc tctttgggac ccgcagaaca
     1321 agatgaatcc gggcaaagtg gtgaatgctt acttgcccac cgagaacctg cggctcggtg
     1381 ctgactacaa accatggcag ccgaagacgt atttcagctt cgcggaagac gccggctcct
     1441 tcgccaaagc cactctgcgc tgccttggcc tgggcgcatg ccgcaagcat gaaggcggca
     1501 ccatgtgccc cagttacctg gccaccatgg aggaagagca cagcacccgg ggccgtgctc
     1561 acatgctttt cgagatgctt cagggtgagg tggttcgcga tcgctggcag gatgagcacg
     1621 tgaaacagtc gctcgacctc tgtctctcct gcaaagcatg caagacagaa tgtcccgcca
     1681 atgttgatat ggcaacgtgg aaggcggaat ttctttctca ttattatgag cggcgcaggc
     1741 gaccgctacg ctcgctggct ttcggactcg ttgatcgctg ggcagcactg gcttccattt
     1801 cgccggaagc tgcgaacttc gctaccagta atcccttcat tggggccatc gcgcggaaag
     1861 cgatcgggat agctccacag cgacagctgc cggtgctggc gaagcacacc ttccgcagct
     1921 gggtacgcga gcgccagccg aatgtggagc tcggcccgct ggcccagaag gtcattctct
     1981 ggccggacac cttcaacaac tatttccatc cggaaacagc gcaggctgct tataacctgc
     2041 tgagcagcgc cggatttcgg gtcattgtcc cgcaacatca tttctgctgt ggccggccgc
     2101 tttacgactt tggaatgctc gatcgagcca ggcgctattt gcgcgaaatc atggacaaac
     2161 tgggtcccca gattgatgcc ggtgtatcag tggtggtgct ggagccaagc tgcgcctccg
     2221 tcttccgcga tgagctcacc ggcattttcc cgaaagaaga gcgggcccgc aaacttagcc
     2281 agcagacttt tttactcagc gagtttctgg agcgcattgg ttatgaaccg ccgcacttca
     2341 aagccacgat tctgctgcat gggcactgtc atcacaagtc gctgatgaaa atgactgccg
     2401 aggaaaagct gctgacgagt atgggcgccc aaatcagcgc gccggacacc ggatgctgcg
     2461 gcatggccgg gccctttggc tttgagaagg agaagtacga agtttcacag aagattggcg
     2521 aacgcgtgct gctgccggcg gtacgtgctg cagatgagag caccctgatt gtcgctgacg
     2581 ggttcagctg ccgtgaacag atttcccagg caactggaag gacgacgttg caccttgcgg
     2641 agctacttgc gctggcgcaa aaaaatgctc cccgctaagc gacccgcagt tacctgatgt
     2701 tcccggcggc cgccagcatt tcatcggcac gcgcacgaat ccgaatgtcc tcagtgaaat
     2761 tcacccagcg cacagttcct gaagagtcaa caagaaactc ggcgggccgg gcaatctcgt
     2821 gcccttccgg gccgccgcct gcatgctcca ggtgataccg gtgaattact tccccctttg
     2881 ggtcgcaaag cagcggaaag gtaaagccag ctttgcgcgc caggtcacgc gagacttcag
     2941 gagcatccac gcttatggcc accggctgaa ctccggcgtc gcgaaattgc tgcagctgtt
     3001 tctgtatgcc tcgcaactcg aggacgcaga atggtcacca gtagccgcgg tagaagacga
     3061 ctagcactgc cttgggaggc ggctggttcg cagcgagtag ctgacccagt gagacgctct
     3121 ggccgttggt gtccgggagc gtgaattcag gtgccttttg cccgacctgc ggcgccgaat
     3181 tcgcagcggg aatgtggcgc gctgagtaaa agaaaaagat ccccaacagc aaaacgaggg
     3241 aggtgatggt cgtaagcgtc caaccggcag ctttgcccga gtagatgccc ggctcgctct
     3301 gcgcgcgccg gagcccaact actgtgacga tcaccgctgc cagagcgagc agcgggctta
     3361 accacggcag cgccggctgg aaaggcgtgc tcacaaaaaa caaacctatg ctgccgaccg
     3421 caagcagcag agcaaagaag ccgagccaca gagcggtgtt gttgcgctga atggtttcag
     3481 tcatgctgcg cggattttag caggcgagaa gctgcatgta ccagtgtgcg atgaggcggt
     3541 cgtgcgaatt gctttagcgg gccaaccgca accaatcgtg tttccatctg agaggtcacg
     3601 caaagggagg caaggagatg ggcatctttg ataaggtgga aaacgcaatc ggtggacaga
     3661 ctggcgtcaa cgaagaacaa cacaacaccc tgctgcaaac ggcaatgcag atgttcgcga
     3721 atcgtggcgg tatcggtacc cttcttagca atgctcagtc cagcggcctg agctcgatcg
     3781 tgcaatcctg gatcggccgc ggagaaaacc agcccatcaa tgcggagcaa acaacccagc
     3841 tcgtggggca ggaccgcttg cagcagcttg cgtctcgcgt cggggttcca cccgccatcg
     3901 ccagcatggt gctgtctcgc gttcttcctt cggtagtgga ccatgcaacc ccggagggca
     3961 aggtgccgga gcatgaccag agcgccgcgt aaccgcgcta gtgaatcgtt ttgggcgcgg
     4021 cgtccagccg cgccttaatc at
//
